BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043142
(512 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/544 (73%), Positives = 448/544 (82%), Gaps = 33/544 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFGF V+ATKLV+LY CD L +A LFDRIP+ N+FLWNVLIR YAWNGPYE A++LY
Sbjct: 105 GFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLY 164
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
Y++ + GLVPDNFTFPF LKAC+ALSAIE GR IHE V++ WE DVFVGAALIDMYAKC
Sbjct: 165 YQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKC 224
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
CV +AR+VFDKIL RD P+EATLVT I
Sbjct: 225 GCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAI 284
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SASAD AALPQGRELHG SWR FE + KVKTALVDMYAKCG V+VARNLFE+L KRVV
Sbjct: 285 SASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVV 344
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
SWNAMITGYAMHGH+T+ALDLFE+M +PDHITFVGVLSACS GGL +EG MFFE+M+
Sbjct: 345 SWNAMITGYAMHGHATEALDLFEEMNRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMI 404
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
RDY IDP+VQHYTCMVDLLGHSGRLDEA +LIMQM+V PD GVWGALLNSCK+H +V+L
Sbjct: 405 RDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELG 464
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
E+ALE+LIELEP DAGNYVILSNIYA+A WEGVAKLRKLM DR +KKSIACSWIEVKNK
Sbjct: 465 EIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNK 524
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
HAFLSGD SHP DEIY++L+ + G MKEAGY P T SVFHDVE+DEKANM+C HSERL
Sbjct: 525 VHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERL 584
Query: 449 AIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
AIAFGLI+TP GTRLLITKNL+IC+DCH+AIKFISKITEREITVRDVNRYHHFKDG+CSC
Sbjct: 585 AIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSC 644
Query: 509 GDYW 512
GDYW
Sbjct: 645 GDYW 648
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 140/314 (44%), Gaps = 38/314 (12%)
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L P + L++C A AI+ G+++H V + D + L+++Y C + +AR
Sbjct: 71 LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+FD+I + + P T V+ A A ++
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
A+ GRE+H + +E +V V AL+DMYAKCG V AR +F+++ + V WN+M+
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLA 250
Query: 216 GYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFE-SMVRDYHI 273
Y+ +GH L L +M ++P T V +SA + +GR S +++
Sbjct: 251 AYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFES 310
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
V+ T +VD+ G + A +L ++ VK W A++ +HGH A E
Sbjct: 311 HDKVK--TALVDMYAKCGSVRVARNLFERLGVKRVVS-WNAMITGYAMHGHATEALDLFE 367
Query: 334 KLIELEPHDAGNYV 347
++ + D +V
Sbjct: 368 EMNRVAKPDHITFV 381
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/545 (70%), Positives = 440/545 (80%), Gaps = 33/545 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G ++ LATKLV+ YS C+ L NAH LFD+IP+ NLFLWNVLIRAYAWNGP+E AI L
Sbjct: 87 LGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISL 146
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
Y+++LE GL PDNFT PF LKACSALS I EGR IHE VIR+ WE DVFVGAAL+DMYAK
Sbjct: 147 YHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAK 206
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C CVV+AR VFDKI++RD P+EATLVTV
Sbjct: 207 CGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTV 266
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
IS+SADIA LP GRE+HGF WRH F+ N KVKTAL+DMYAKCG VKVA LFE+LREKRV
Sbjct: 267 ISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRV 326
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
VSWNA+ITGYAMHG + +ALDLFE+M E QPDHITFVG L+ACSRG L DEGR + M
Sbjct: 327 VSWNAIITGYAMHGLAVEALDLFERMMKEAQPDHITFVGALAACSRGRLLDEGRALYNLM 386
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
VRD I+P+V+HYTCMVDLLGH G+LDEA DLI QM V PD GVWGALLNSCK HG+V+L
Sbjct: 387 VRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVEL 446
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE+ALEKLIELEP D+GNYVIL+N+YA++ WEGVA+LR+LMID+GIKK+IACSWIEVKN
Sbjct: 447 AEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKN 506
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K +AFLSGD SHPN IYA+LK LEG M+EAGYVP T SVFHDVE DEK +M+C HSER
Sbjct: 507 KVYAFLSGDVSHPNSGAIYAELKRLEGLMREAGYVPDTGSVFHDVEEDEKTDMVCSHSER 566
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGLI+T GTRLLITKNL+IC+DCH+AIKFISKITEREITVRDVNRYHHF+ G+CS
Sbjct: 567 LAIAFGLISTLPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFRHGLCS 626
Query: 508 CGDYW 512
CGDYW
Sbjct: 627 CGDYW 631
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 142/301 (47%), Gaps = 45/301 (14%)
Query: 71 PDN-FTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
P N + + L++C + A+E G+++H + + ++ + L++ Y+ C+ + NA
Sbjct: 55 PSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHH 114
Query: 130 VFDKILERD---------------------------------PSEATLVTVISASADIAA 156
+FDKI + + P TL V+ A + ++
Sbjct: 115 LFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALST 174
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
+ +GR +H R +E +V V ALVDMYAKCG V AR++F+++ ++ V WN+M+
Sbjct: 175 IGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAA 234
Query: 217 YAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHID 274
YA +GH ++L L +M + V+P T V V+S+ + GR R + +
Sbjct: 235 YAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYN 294
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
V+ T ++D+ G + AC L ++R K W A++ +HG LA+E
Sbjct: 295 DKVK--TALIDMYAKCGSVKVACVLFERLREKRVVS-WNAIITGYAMHG------LAVEA 345
Query: 335 L 335
L
Sbjct: 346 L 346
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/545 (68%), Positives = 438/545 (80%), Gaps = 33/545 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G F+P+LATKLV+LY C+ L NAH LFDRI +RNLFLWNV+IR YAWNGPYE+AI L
Sbjct: 30 VGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISL 89
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
YY++ + GLVPD FTFPF LKACSALSA+EEG++IH+DVIR+ E+DVFVGAALIDMYAK
Sbjct: 90 YYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAK 149
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C CV +ARQVFDKI ERD P+E T V
Sbjct: 150 CGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVIS 209
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
I+ASAD LPQG+ELHG+SWRH FE N KVKTAL+DMYAK G V VAR+LFE L EKRV
Sbjct: 210 IAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRV 269
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
VSWNAMITGYAMHGH+ +ALDLF++MK +V PDHITFVGVL+ACS GGL +EG+M F SM
Sbjct: 270 VSWNAMITGYAMHGHANEALDLFKEMKGKVLPDHITFVGVLAACSHGGLLNEGKMHFRSM 329
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ D++I P+VQHYTCM+DLLGH GRL+EA LIM+MRV+PD GVWGALL+SCK+HG+V++
Sbjct: 330 ISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEM 389
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
ELALEKL+ELEP D GNYVILSN+YA+A W+GVA+LR LM+++G+KKSIACSWIEV N
Sbjct: 390 GELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLKKSIACSWIEVGN 449
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K HAFLS D SHP + IYA+LK MKEAGY P SVFHDVE+DEK +M+ CHSER
Sbjct: 450 KVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGYAPQVGSVFHDVEDDEKVDMVSCHSER 509
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGLI+T GT+LLI KNL+IC+DCH+AIKFISKITEREIT+RDVNRYHHFKDG+CS
Sbjct: 510 LAIAFGLISTSAGTKLLIIKNLRICEDCHVAIKFISKITEREITIRDVNRYHHFKDGVCS 569
Query: 508 CGDYW 512
CGD+W
Sbjct: 570 CGDFW 574
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 161/340 (47%), Gaps = 49/340 (14%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
L++C AIE G+++H + + + + L+++Y C+ + NA +FD+I +R+
Sbjct: 8 LQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNL 67
Query: 139 --------------------------------PSEATLVTVISASADIAALPQGRELHGF 166
P + T V+ A + ++A+ +G+++H
Sbjct: 68 FLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKD 127
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
R E +V V AL+DMYAKCG V+ AR +F+++ E+ VV WN+M+ Y+ +G ++
Sbjct: 128 VIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDES 187
Query: 227 LDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
L L M + ++P TFV ++A + GL +G+ R + + + + T ++D
Sbjct: 188 LALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWR-HGFESNDKVKTALMD 246
Query: 286 LLGHSGRLDEA---CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHD 342
+ SG ++ A +L+ + RV W A++ +HGH A AL+ E++
Sbjct: 247 MYAKSGSVNVARSLFELLEEKRVVS----WNAMITGYAMHGH---ANEALDLFKEMKGKV 299
Query: 343 AGNYVILSNIYARAANW----EGVAKLRKLMIDRGIKKSI 378
+++ + A ++ EG R ++ D I ++
Sbjct: 300 LPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTV 339
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/545 (68%), Positives = 435/545 (79%), Gaps = 33/545 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G ++ LATKLVHLY+ + L NA LFD+IP++NLFLWNVLIR YAWNGP++ AI L
Sbjct: 76 LGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIIL 135
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
Y+++L+ GL PDNFT PF LKACSALSAI EGR IHE VI++ WE D+FVGAALIDMYAK
Sbjct: 136 YHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAK 195
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C CV++A +VFDKI+ RD P+EATLVTV
Sbjct: 196 CGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTV 255
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
IS+SAD+A LP GRE+HGF WRH F+ N KVKTAL+DMYAKCG VKVA LFE+LREKRV
Sbjct: 256 ISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRV 315
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
VSWNA+ITGYAMHG + ALDLF+KM+ E +PDHITFVGVL+ACSRG L DEGR + M
Sbjct: 316 VSWNAIITGYAMHGLAVGALDLFDKMRKEDRPDHITFVGVLAACSRGRLLDEGRALYNLM 375
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
VRDY I P+VQHYTCM+DLLGH G+LDEA DLI M VKPD GVWGALLNSCK+HG+V+L
Sbjct: 376 VRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVEL 435
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AELALEKLIELEP D+GNYVIL+N+YA++ WEGV KLR++MID+ IKK+IACSWIEVKN
Sbjct: 436 AELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKN 495
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K +AFL+GD SH N D IYA+LK LEG M EAGY P T SVFHDVE DEK +M+C HSER
Sbjct: 496 KVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSER 555
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGLI+T GTRLLITKNL+IC+DCH+AIKFISKI EREITVRDVNRYH FK G+CS
Sbjct: 556 LAIAFGLISTSPGTRLLITKNLRICEDCHVAIKFISKIMEREITVRDVNRYHSFKHGMCS 615
Query: 508 CGDYW 512
CGD+W
Sbjct: 616 CGDHW 620
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 93/182 (51%), Gaps = 5/182 (2%)
Query: 145 VTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE 204
+++ + D AL G++LH + N + T LV +YA + ARNLF+++ +
Sbjct: 51 TSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPK 110
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMF 263
+ + WN +I GYA +G A+ L+ KM D ++PD+ T VL ACS EGR
Sbjct: 111 QNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSI 170
Query: 264 FESMVRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
E +++ + D V ++D+ G + +A + ++ V+ D +W ++L + +
Sbjct: 171 HEYVIKSGWERDLFVG--AALIDMYAKCGCVMDAGRVFDKIVVR-DAVLWNSMLAAYAQN 227
Query: 323 GH 324
GH
Sbjct: 228 GH 229
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/511 (65%), Positives = 381/511 (74%), Gaps = 65/511 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFGF V+ATKLV+LY CD L +A LFDRIP+ N+FLWNVLIR YAWNGPYE A++LY
Sbjct: 105 GFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLY 164
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
Y++ + GLVPDNFTFPF LKAC+ALSAIE GR IHE V++ WE DVFVGAALIDMYAKC
Sbjct: 165 YQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKC 224
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
CV +AR+VFDKIL RD A LV SW A
Sbjct: 225 GCVGSAREVFDKILVRD---AVLVV--------------------SW-----------NA 250
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDH 241
++ YA G A +LFE+ M +PDH
Sbjct: 251 MITGYAMHGHATEALDLFEE-------------------------------MNRVAKPDH 279
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
ITFVGVLSACS GGL +EG MFFE+M+RDY IDP+VQHYTCMVDLLGHSGRLDEA +LIM
Sbjct: 280 ITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIM 339
Query: 302 QMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEG 361
QM+V PD GVWGALLNSCK+H +V+L E+ALE+LIELEP DAGNYVILSNIYA+A WEG
Sbjct: 340 QMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEG 399
Query: 362 VAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGY 421
VAKLRKLM DR +KKSIACSWIEVKNK HAFLSGD SHP DEIY++L+ + G MKEAGY
Sbjct: 400 VAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGY 459
Query: 422 VPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKF 481
P T SVFHDVE+DEKANM+C HSERLAIAFGLI+TP GTRLLITKNL+IC+DCH+AIKF
Sbjct: 460 SPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKF 519
Query: 482 ISKITEREITVRDVNRYHHFKDGICSCGDYW 512
ISKITEREITVRDVNRYHHFKDG+CSCGDYW
Sbjct: 520 ISKITEREITVRDVNRYHHFKDGVCSCGDYW 550
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 4/212 (1%)
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P+ + +++ + A+ G++LH F + + T LV++Y C + AR L
Sbjct: 73 PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLL 132
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLF 257
F+++ + + WN +I GYA +G A+ L+ +M D + PD+ TF VL AC+
Sbjct: 133 FDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAI 192
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGAL 315
+ GR E +V+ + V ++D+ G + A ++ ++ V+ V W A+
Sbjct: 193 EHGREIHEHVVQT-GWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAM 251
Query: 316 LNSCKLHGHVKLAELALEKLIELEPHDAGNYV 347
+ +HGH A E++ + D +V
Sbjct: 252 ITGYAMHGHATEALDLFEEMNRVAKPDHITFV 283
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/546 (58%), Positives = 399/546 (73%), Gaps = 35/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G G VL+TKLV LY+AC + +A +LFD +P+RN+FLWNVLIRAYA GP E A+ LY
Sbjct: 92 GLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLY 151
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++E G+ PDNFT+P LKAC+AL +E GR +H+ V +W DVFV A ++DMYAKC
Sbjct: 152 RGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKC 211
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
CV +AR VFD I RD P+ ATLV+ +
Sbjct: 212 GCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAV 271
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA+AD AALP+GRELHGF WR F L K+KT+LVDMYAK G V+VAR LFEQL ++ +V
Sbjct: 272 SAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELV 331
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQ--PDHITFVGVLSACSRGGLFDEGRMFFES 266
SWNAMI GY MHGH+ +AL LF KMK + Q PD+ITFVGVLSAC+ GG+ +E + FF
Sbjct: 332 SWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYL 391
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
MV Y I P+VQHYTC++D+LGH+GR +EA DLI M ++PD G+WGALLN CK+H +V+
Sbjct: 392 MVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHKNVE 451
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
L ELAL+KLIELEP DAGNYV LSNIYA++ WE A++RKLM +RG+KK +ACSWIE+K
Sbjct: 452 LGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTNRGLKKILACSWIELK 511
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
K H FL GDASHP DEIY +L+ LEG M +AGYVP VFH+V++DEK NM+ HSE
Sbjct: 512 GKTHGFLVGDASHPRSDEIYGELERLEGLMSDAGYVPDIIPVFHNVDDDEKRNMVRSHSE 571
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
RLAIAFGLI+TP GT+LL+TKNL++C+DCH+ IK IS+I +REI +RDVNRYHHF +G C
Sbjct: 572 RLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGEC 631
Query: 507 SCGDYW 512
SC DYW
Sbjct: 632 SCKDYW 637
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 129/291 (44%), Gaps = 38/291 (13%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
L++C A ++ GR++H ++ + D + L+D+YA C V +AR++FD + +R+
Sbjct: 69 LQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNV 128
Query: 139 --------------PSEA------------------TLVTVISASADIAALPQGRELHGF 166
P EA T V+ A A + L GRE+H
Sbjct: 129 FLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQR 188
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
R+ +V V +VDMYAKCG V AR +F+ + + V WN+MI Y +G +A
Sbjct: 189 VSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEA 248
Query: 227 LDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFE-SMVRDYHIDPSVQHYTCMV 284
L L M + + P T V +SA + GR R + + ++ T +V
Sbjct: 249 LALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLK--TSLV 306
Query: 285 DLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
D+ SG + A L Q+ +K + W A++ +HGH A K+
Sbjct: 307 DMYAKSGWVQVARVLFEQL-MKRELVSWNAMICGYGMHGHADEALALFNKM 356
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 324/546 (59%), Positives = 402/546 (73%), Gaps = 35/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G G VLATKLV LY+AC + +A +LFD +P+RN+FLWNVLIRAYA +GP+EVAI+LY
Sbjct: 92 GLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLY 151
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+++ G+ PDNFT+P ALKAC+AL +E GR +HE V+ W D+FV A L+DMYAKC
Sbjct: 152 RGMVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKC 211
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
CV +AR VFD+I RD P+ ATLV+ I
Sbjct: 212 GCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTI 271
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA+AD AALP+GRELHGF WR F+ K+KT+LVDMYAK G V+VAR LFEQL ++ +V
Sbjct: 272 SAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELV 331
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQ--PDHITFVGVLSACSRGGLFDEGRMFFES 266
SWNAMI GY MHGH +AL LF KM+ E Q PD+ITFVGVLSAC+ GG+ E + FF
Sbjct: 332 SWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGL 391
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
MV Y I P+VQH+TC+VD+LGH+GR +EA DLI M ++PD G+WGALLN CK+H +V+
Sbjct: 392 MVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVE 451
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
L ELAL+KLIELEP DAGNYV+LSNIYA++ WE A++RKLM +RG+KK I CSWIE+K
Sbjct: 452 LGELALQKLIELEPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELK 511
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
K H FL GDASHP EIY +L+ LEG M +AGY+P T VFHDV +DEK NM+ HSE
Sbjct: 512 GKTHGFLVGDASHPRSAEIYEELERLEGLMSDAGYMPDTMPVFHDVGDDEKRNMMRSHSE 571
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
RLAIAFGLI+TP GT+LL+TKNL++C+DCH+ IK IS+I +REI +RDVNRYHHF +G C
Sbjct: 572 RLAIAFGLISTPSGTKLLVTKNLRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGEC 631
Query: 507 SCGDYW 512
SC DYW
Sbjct: 632 SCKDYW 637
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 139/334 (41%), Gaps = 42/334 (12%)
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD--- 132
+ L++C A ++ GR++H ++ + D + L+D+YA C V +AR++FD
Sbjct: 65 YTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMP 124
Query: 133 -----------KILERDPSEATLVTVISASADIAALPQ-------------------GRE 162
+ RD + + D P GRE
Sbjct: 125 KRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGRE 184
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
+H + ++ V LVDMYAKCG V AR +F+++R + V WN+MI Y +G
Sbjct: 185 VHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGR 244
Query: 223 STKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYT 281
+AL L M + V P T V +SA + GR R D + T
Sbjct: 245 PMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWR-RGFDRQDKLKT 303
Query: 282 CMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPH 341
+VD+ SG + A L Q+ +K + W A++ +HGH A L L + +E
Sbjct: 304 SLVDMYAKSGWVQVARVLFEQL-MKRELVSWNAMICGYGMHGHFDEA-LKLFNKMRVEAQ 361
Query: 342 DAGNYVILSNIYARAANWEGVAKLRK----LMID 371
+ + + + A N G+ K K LM+D
Sbjct: 362 VTPDNITFVGVLS-ACNHGGMVKEAKEFFGLMVD 394
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 318/548 (58%), Positives = 393/548 (71%), Gaps = 37/548 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP-QRNLFLWNVLIRAYAWNGPYEVAIEL 60
G G VLAT+LV LY++C + A +LFD +P Q N+FLWNVLIRAYA +GP E AIEL
Sbjct: 93 GLGLDAVLATRLVDLYASCGLVSVARRLFDEMPNQGNVFLWNVLIRAYARDGPREAAIEL 152
Query: 61 YYRLLEIG-LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
Y +L G + PDNFT+P LKAC+AL + GR +H+ V+R W DVFV A LIDMYA
Sbjct: 153 YREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYA 212
Query: 120 KCSCVVNARQVFDKILERD----------------PSEA--------------TLVTVIS 149
KC CV A VFD RD P+EA T+VT++S
Sbjct: 213 KCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVS 272
Query: 150 ---ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
A+AD ALP+GRELHG+ WR F K+KT+L+DMYAK G V VAR LF+QL +
Sbjct: 273 AISAAADAGALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRE 332
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ--PDHITFVGVLSACSRGGLFDEGRMFF 264
++SWNAMI G+ MHGH+ A +LF +M++E Q PDHITFVGVLSAC+ GG+ E + F
Sbjct: 333 LISWNAMICGFGMHGHADHACELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVF 392
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+ MV Y I P VQHYTC+VD+LGHSGR EA D+I M VKPD G+WGALLN CK+H +
Sbjct: 393 DLMVTVYSIKPMVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKN 452
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
V+LAELAL KLIELEP DAGNYV+LSNIYA++ WE A++RKLM +RG+KK IACSWIE
Sbjct: 453 VELAELALHKLIELEPEDAGNYVLLSNIYAQSGKWEEAARVRKLMTNRGLKKIIACSWIE 512
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
+K K+H FL GDASHP DEIY +L+ LEG + + GYVP T SVFH+VE+DEK NM+ H
Sbjct: 513 LKGKSHGFLVGDASHPRSDEIYEELERLEGLISQTGYVPDTTSVFHNVEDDEKRNMVRGH 572
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SERLAIAFGLI+TP GT+LL+TKNL++C+DCH+ IK IS+I +REI +RDVNRYHHF +G
Sbjct: 573 SERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKLISQIEQREIIIRDVNRYHHFVNG 632
Query: 505 ICSCGDYW 512
CSC D+W
Sbjct: 633 ECSCKDHW 640
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 311/548 (56%), Positives = 387/548 (70%), Gaps = 37/548 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP-QRNLFLWNVLIRAYAWNGPYEVAIEL 60
G G VLAT+LV LY++C + A ++FD +P Q N+FLWNVLIRAYA +GP E AIEL
Sbjct: 98 GTGLDAVLATRLVDLYASCGHVSLARRVFDEMPNQGNVFLWNVLIRAYARDGPCEAAIEL 157
Query: 61 YYRLLEIG-LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
Y +L G + PDNFT+P LKAC+AL + GR +H+ V+R W TDVFV LIDMYA
Sbjct: 158 YRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYA 217
Query: 120 KCSCVVNARQVFDKILERD---------------------------------PSEATLVT 146
KC C+ A VF+ RD P+ ATLV+
Sbjct: 218 KCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVS 277
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
ISA+A +ALP+GRELHG+ WR F K+KT+L+DMYAK G V VA LFEQL +
Sbjct: 278 AISAAAVASALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRE 337
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ--PDHITFVGVLSACSRGGLFDEGRMFF 264
++SWNAMI G+ MHGH+ A +LF +M+ E Q PDHITFVGVLSAC+ GG+ E + F
Sbjct: 338 LISWNAMICGFGMHGHADHAFELFSRMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVF 397
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+ MV Y I P+VQHYTC+VD+LGHSGR EA D+I M VKPD G+WGALLN CK+H +
Sbjct: 398 DLMVTVYSIKPTVQHYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKN 457
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
V+LAELAL+KLIELEP DAGNYV+LSNIYA + WE A++RKLM +RG+KK IACSWIE
Sbjct: 458 VELAELALQKLIELEPEDAGNYVLLSNIYAESGKWEEAARVRKLMTNRGLKKIIACSWIE 517
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
+K K H FL GDASHP D+IY +L+ LEG + + GYVP T VFH+VE+DEK NM+ H
Sbjct: 518 LKGKFHGFLVGDASHPRSDDIYEELERLEGLISQTGYVPDTTPVFHNVEDDEKRNMVWGH 577
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SERLAIAFGLI+TP T+LL+TKNL++C+DCH+ IK IS+I +REI +RDVNRYHHF +G
Sbjct: 578 SERLAIAFGLISTPPRTKLLVTKNLRVCEDCHVVIKLISQIEQREIIIRDVNRYHHFVNG 637
Query: 505 ICSCGDYW 512
CSC D+W
Sbjct: 638 ECSCKDHW 645
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 237/539 (43%), Positives = 341/539 (63%), Gaps = 34/539 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++ LV++Y+ C ++ AH+LF+R+P R++ WN +I Y+ N + A+ + R+
Sbjct: 257 LVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVR 316
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ P++ T L AC+ L A+E+G++IH IR+ +E++ VG AL++MYAKC V +A
Sbjct: 317 GIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSA 376
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
++F+++ +++ P +V+V+ A A
Sbjct: 377 YKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHF 436
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
AL QG+++HG++ R FE NV V T LVD+YAKCG V A+ LFE++ E+ VVSW MI
Sbjct: 437 LALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMI 496
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
Y +HGH AL LF KM++ + DHI F +L+ACS GL D+G +F+ M DY +
Sbjct: 497 LAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGL 556
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P ++HY C+VDLLG +G LDEA +I M ++PD VWGALL +C++H +++L E A +
Sbjct: 557 APKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAK 616
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
L EL+P +AG YV+LSNIYA A WE VAKLRK+M ++G+KK CS + V FL
Sbjct: 617 HLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFL 676
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD +HP ++IYA L+ L +M++AGYVP T DVE + K N++ HSE+LAI+FG
Sbjct: 677 VGDRTHPQSEQIYAMLEILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFG 736
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+INT G + I KNL++C DCH A KFISKI REI VRD NR+HH K+G CSCGDYW
Sbjct: 737 IINTSPGIPIRIMKNLRVCSDCHNATKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 126/371 (33%), Positives = 201/371 (54%), Gaps = 38/371 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNG-PYEVAIEL 60
GF ++ T L +Y+ C L NA Q+FDR+P+R++ WN +I Y+ NG PYE A+ L
Sbjct: 150 GFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYE-ALAL 208
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + G+ P++ T + C+ L A+E+G++IH IR+ E+DV V L++MYAK
Sbjct: 209 FSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAK 268
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C V A ++F+++ RD P+ T+V+V
Sbjct: 269 CGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSV 328
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A A + AL QG+++HG++ R FE N V ALV+MYAKCG V A LFE++ +K V
Sbjct: 329 LPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNV 388
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V+WNA+I+GY+ HGH +AL LF +M+ + ++PD V VL AC+ ++G+
Sbjct: 389 VAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGY 448
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+R + +V T +VD+ G ++ A L +M + D W ++ + +HGH +
Sbjct: 449 TIRS-GFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP-EQDVVSWTTMILAYGIHGHGE 506
Query: 327 LAELALEKLIE 337
A K+ E
Sbjct: 507 DALALFSKMQE 517
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/356 (32%), Positives = 177/356 (49%), Gaps = 42/356 (11%)
Query: 18 SACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFP 77
SAC N Q + N +W I Y NG + A+ LYY++ G+ PD F
Sbjct: 68 SACA---NQTQFTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFL 124
Query: 78 FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER 137
+KAC + S ++ GR++HED+I +E+DV VG AL MY KC + NARQVFD++ +R
Sbjct: 125 SVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKR 184
Query: 138 D---------------------------------PSEATLVTVISASADIAALPQGRELH 164
D P+ +TLV+V+ A + AL QG+++H
Sbjct: 185 DVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIH 244
Query: 165 GFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST 224
++ R E +V V LV+MYAKCG V A LFE++ + V SWNA+I GY+++
Sbjct: 245 CYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHH 304
Query: 225 KALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
+AL F +M+ ++P+ IT V VL AC+ ++G+ +R V +
Sbjct: 305 EALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVG-NAL 363
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
V++ G ++ A L +M K + W A+++ HGH AL IE++
Sbjct: 364 VNMYAKCGNVNSAYKLFERMP-KKNVVAWNAIISGYSQHGH---PHEALALFIEMQ 415
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 243/545 (44%), Positives = 341/545 (62%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + + TK +Y + + + A +F+ IP FLWNV+IR +A +G + ++ELY
Sbjct: 747 GLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELY 806
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+++E GL PD F FPFALK+C+ LS ++ G+ IH+ ++ D+FV AAL+DMYAKC
Sbjct: 807 SKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKC 866
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ AR VFDK+ RD P+ ++++V+
Sbjct: 867 GDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVL 926
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A ++ AL +G H + + FE ++ V TA++DMY+KCG + +AR LF++ K +V
Sbjct: 927 LACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLV 986
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
W+AMI Y +HGH KA+DLF++M K V+P H+TF VLSACS GL +EG+M+F+ M
Sbjct: 987 CWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLM 1046
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
++ I + +Y CMVDLLG +G+L EA DLI M V+PD +WG+LL +C++H ++ L
Sbjct: 1047 TEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDL 1106
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE + L L+P AG +V+LSNIYA + W V K+RK+M RG K S +E N
Sbjct: 1107 AEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDN 1166
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ H F GD SHP +++YAKL+ L MK GYVP T+ V HD+E + K + HSER
Sbjct: 1167 QVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSER 1226
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGLINT GT L ITKNL+IC DCH AIK ISKI R I VRD++R+H F+DG+CS
Sbjct: 1227 LAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCS 1286
Query: 508 CGDYW 512
CGDYW
Sbjct: 1287 CGDYW 1291
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 160/459 (34%), Positives = 260/459 (56%), Gaps = 35/459 (7%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L++LY+ C A LF ++P++++ W+ +I YA N A+ L++ ++E
Sbjct: 243 LVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKR 302
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P++ T AL+AC+ +EEG++IH+ + +E D V ALIDMY KCSC A
Sbjct: 303 FEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAV 362
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+F ++ ++D P +V +++AS+++
Sbjct: 363 DLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELG 422
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
Q LHG+ R F NV V +L+++Y+KCG + A LF+ + + VV W++MI
Sbjct: 423 IFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIA 482
Query: 216 GYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
Y +HG +AL++F++M V+P+++TF+ +LSACS GL +EG F+ MV DY +
Sbjct: 483 AYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQL 542
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P +H+ MVDLLG G+L +A D+I +M + P VWGALL +C++H ++++ E A +
Sbjct: 543 RPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAK 602
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
L L+P AG Y++LSNIYA W+ VA+LR + +RG+KK S +EV+ H+FL
Sbjct: 603 NLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFL 662
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDV 432
+ D HP+ +IY L+ LE +M + Y+P + + HD
Sbjct: 663 ASDRFHPDSQKIYELLRKLEAQMGKEVYIPDLDFLLHDT 701
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/353 (33%), Positives = 186/353 (52%), Gaps = 41/353 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-EI 67
ATKL LY+ C L A ++FD P N+ LWN +R+Y +E + L++ ++
Sbjct: 38 FATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTA 97
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN-KWETDVFVGAALIDMYAKCSCVVN 126
G PDNFT P ALKAC+ L +E G+ IH +N + +D+FVG+AL+++Y+KC +
Sbjct: 98 GEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGE 157
Query: 127 ARQVF------DKIL----------ERDPSEA------------------TLVTVISASA 152
A +VF D +L DP EA TLV+V+SA A
Sbjct: 158 ALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACA 217
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+ + G +HG R F+ ++ + +L+++YAK G K+A NLF ++ EK V+SW+
Sbjct: 218 QLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWST 277
Query: 213 MITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV-RD 270
MI YA + + +AL+LF +M + +P+ +T V L AC+ +EG+ + V +
Sbjct: 278 MIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKG 337
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+ +D SV T ++D+ DEA DL ++ K D W ALL+ +G
Sbjct: 338 FELDFSVS--TALIDMYMKCSCPDEAVDLFQRLP-KKDVVSWVALLSGYAQNG 387
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 186/381 (48%), Gaps = 37/381 (9%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ + LV LYS C + A ++F+ + + LW ++ Y N E A+ L+ +++ +
Sbjct: 141 VGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMD 200
Query: 69 -LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
+V D T + AC+ L ++ G +H VIR +++ D+ + +L+++YAK C A
Sbjct: 201 CVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIA 260
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
+F K+ E+D P+ T+V+ + A A
Sbjct: 261 ANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVS 320
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L +G+++H + FEL+ V TAL+DMY KC A +LF++L +K VVSW A++
Sbjct: 321 RNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALL 380
Query: 215 TGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+GYA +G + K++ +F M D +QPD + V +L+A S G+F + +VR
Sbjct: 381 SGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRS-GF 439
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
+ +V +++L G L +A L M V+ D +W +++ + +HG A +
Sbjct: 440 NSNVFVGASLIELYSKCGSLGDAVKLFKGMIVR-DVVIWSSMIAAYGIHGRGGEALEIFD 498
Query: 334 KLIELEPHDAGNYVILSNIYA 354
++++ N LS + A
Sbjct: 499 QMVKNSTVRPNNVTFLSILSA 519
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMH 220
++ H + + + + ++ T MY + A +FE + WN MI G+A
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 221 GHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMV-----RDYHID 274
G +L+L+ KM ++ ++PD F L +C+ G++ + +V D +D
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+ +VD+ G ++ A + +M V+ D W ++++ +G+
Sbjct: 857 AA------LVDMYAKCGDIEAARLVFDKMAVR-DLVSWTSMISGYAHNGY 899
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 235/545 (43%), Positives = 350/545 (64%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+G + T L+ +Y+ C L +AH++F++I ++N+ WN +I AY + Y+ A+ +
Sbjct: 443 GYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATF 502
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
LL+ G+ P++ TF L C + ++E G+ +H +++ E+D+ V AL+ M+ C
Sbjct: 503 QALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNC 562
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+++A+ +F+ + +RD P + T ++
Sbjct: 563 GDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLL 622
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A A AL +GR LH F+ +V V T L+ MY KCG ++ A +F +L +K V
Sbjct: 623 NACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVY 682
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SW +MITGYA HG +AL+LF +M+ E V+PD ITFVG LSAC+ GL +EG F+SM
Sbjct: 683 SWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM 742
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
++++I+P ++HY CMVDL G +G L+EA + I++M+V+PD VWGALL +C++H +V+L
Sbjct: 743 -KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVEL 801
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE A +K +EL+P+D G +VILSNIYA A W+ VAK+RK+M+DRG+ K SWIEV
Sbjct: 802 AEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDG 861
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K H F S D +HP +EI+A+L+ L M++ GYVP T V HDVE++EK + HSER
Sbjct: 862 KVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSER 921
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAI +GL+ TP T ++I+KNL++C DCH A KFISKIT+R+I RD NR+HHFKDG+CS
Sbjct: 922 LAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCS 981
Query: 508 CGDYW 512
CGD+W
Sbjct: 982 CGDFW 986
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 191/375 (50%), Gaps = 40/375 (10%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+++Y+ C +A Q+FD + +++++ WN+L+ Y +G YE A +L+ ++++ + PD
Sbjct: 151 LINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPD 210
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
TF L AC+ +++GR ++ +++ W+TD+FVG ALI+M+ KC + +A +VFD
Sbjct: 211 KRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFD 270
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
+ RD P + V+++ A AL Q
Sbjct: 271 NLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQ 330
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G+++H ++ + V TA++ MY KCG ++ A +F+ ++ + VVSW AMI G+A
Sbjct: 331 GKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQ 390
Query: 220 HGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSV 277
HG +A F KM + ++P+ +TF+ +L ACS G+ + ++ Y D V
Sbjct: 391 HGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRV 450
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+ T ++ + G L +A + ++ K + W A++ + H A + L++
Sbjct: 451 R--TALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITAYVQHEQYDNALATFQALLK 507
Query: 338 --LEPHDAGNYVILS 350
++P+ + IL+
Sbjct: 508 EGIKPNSSTFTSILN 522
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 178/354 (50%), Gaps = 36/354 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T L++++ C + +A ++FD +P R+L W +I A +G ++ A L+ R+ E G
Sbjct: 248 VGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEG 307
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD F L+AC+ A+E+G+++H + W+T+++VG A++ MY KC + +A
Sbjct: 308 VQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDAL 367
Query: 129 QVFDKILER---------------------------------DPSEATLVTVISASADIA 155
+VFD + R +P+ T ++++ A + +
Sbjct: 368 EVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPS 427
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL +G+++ + + +V+TAL+ MYAKCG +K A +FE++ ++ VV+WNAMIT
Sbjct: 428 ALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMIT 487
Query: 216 GYAMHGHSTKALDLFEK-MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
Y H AL F+ +K+ ++P+ TF +L+ C + G+ + ++ ++
Sbjct: 488 AYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGK-WVHFLIMKAGLE 546
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ +V + + G L A +L M K D W ++ HG ++A
Sbjct: 547 SDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVA 599
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 198/429 (46%), Gaps = 76/429 (17%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G+ + T ++ +Y+ C + +A ++FD + RN+ W +I +A +G + A
Sbjct: 341 VGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLF 400
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ +++E G+ P+ TF L ACS+ SA++ G++I + +I + +D V AL+ MYAK
Sbjct: 401 FNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAK 460
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + +A +VF+KI +++ P+ +T ++
Sbjct: 461 CGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSI 520
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
++ +L G+ +H + E ++ V ALV M+ CG + A+NLF + ++ +
Sbjct: 521 LNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDL 580
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMF--- 263
VSWN +I G+ HG + A D F+ M++ ++PD ITF G+L+AC+ EGR
Sbjct: 581 VSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHAL 640
Query: 264 -------------------------FESMVRDYHIDP--SVQHYTCMVDLLGHSGRLDEA 296
E + +H P +V +T M+ GR EA
Sbjct: 641 ITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEA 700
Query: 297 CDLIMQMR---VKPDPGVWGALLNSCKLHGHVKLAELALE-----KLIELEPHDAGNYVI 348
+L QM+ VKPD + L++C H L E L K +EP +Y
Sbjct: 701 LELFYQMQQEGVKPDWITFVGALSAC---AHAGLIEEGLHHFQSMKEFNIEPR-MEHYGC 756
Query: 349 LSNIYARAA 357
+ +++ RA
Sbjct: 757 MVDLFGRAG 765
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 169/336 (50%), Gaps = 38/336 (11%)
Query: 42 NVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR 101
N ++ + G + A+++ R+ + T+ L+ C + +G RI+ + +
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 102 NKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----------------------- 138
+ + D+F+ LI+MYAKC ++A+Q+FD + E+D
Sbjct: 139 SGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198
Query: 139 ----------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
P + T V++++A AD + +GREL+ + ++ ++ V TAL++M+ K
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGV 247
CG + A +F+ L + +V+W +MITG A HG +A +LF++M++E VQPD + FV +
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
L AC+ ++G+ M ++ D + T ++ + G +++A ++ ++ +
Sbjct: 319 LRACNHPEALEQGKKVHARM-KEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGR- 376
Query: 308 DPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPH 341
+ W A++ HG + A L K+IE +EP+
Sbjct: 377 NVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPN 412
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 154/353 (43%), Gaps = 63/353 (17%)
Query: 113 ALIDMYAKCSCVVNARQVFDKILERDPS-----EATLVTVISASADIAALPQGRELHGFS 167
A+++ +K A QV +++ D S T ++ L G ++
Sbjct: 80 AVLNRLSKAGQFNEAMQVLERV---DSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHI 136
Query: 168 WRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKAL 227
+ + ++ + L++MYAKCG A+ +F+ +REK V SWN ++ GY HG +A
Sbjct: 137 KKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAF 196
Query: 228 DLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGR--------------MFFESMVRDYH 272
L E+M +D V+PD TFV +L+AC+ D+GR +F + + + H
Sbjct: 197 KLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMH 256
Query: 273 ID--------------PS--VQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWG 313
I P+ + +T M+ L GR +AC+L +M V+PD +
Sbjct: 257 IKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFV 316
Query: 314 ALLNSCKLHGHVKLAELALEKLIELEPHDAGNYV---ILSNIYARAANWEGVAKLRKLMI 370
+LL +C ++ + ++ E+ D YV ILS +Y + + E ++ L+
Sbjct: 317 SLLRACNHPEALEQGKKVHARMKEV-GWDTEIYVGTAILS-MYTKCGSMEDALEVFDLVK 374
Query: 371 DRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVP 423
R + SW A ++G A H DE + +M E+G P
Sbjct: 375 GRNV-----VSWT-------AMIAGFAQHGRIDEAFLFFN----KMIESGIEP 411
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 241/544 (44%), Positives = 333/544 (61%), Gaps = 34/544 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F +L T ++ +Y+ C C+ +A ++FDR+ ++N+ W+ +I AY ++G A++L+
Sbjct: 162 FQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFR 221
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+L G++PD T L ACS L ++ GR IH V + + D FV AAL+DMY KC
Sbjct: 222 MMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCR 281
Query: 123 CVVNARQVFDKILERD---------------------------------PSEATLVTVIS 149
+ +AR +FDK+ ERD P + +VTV+
Sbjct: 282 EIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVF 341
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A A + A+ + R + + R +F+L+V + TA++DM+AKCG V+ AR +F+++ EK V+S
Sbjct: 342 ACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVIS 401
Query: 210 WNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
W+AMI Y HG KALDLF M + + P+ IT V +L ACS GL +EG FF M
Sbjct: 402 WSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMW 461
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
DY + V+HYTC+VDLLG +GRLDEA LI M V+ D G+WGA L +C+ H V LA
Sbjct: 462 EDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLA 521
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
E A L+EL+P + G+Y++LSNIYA A WE VAK R LM R +KK +WIEV NK
Sbjct: 522 EKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNK 581
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
+H F GD +HP EIY LK L +++ GYVP T V HDV+ + K ++ HSE+L
Sbjct: 582 SHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKL 641
Query: 449 AIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
AIAFGLI TP+ T + I KNL++C DCH K +S IT R I VRD NR+HHFK+G CSC
Sbjct: 642 AIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSC 701
Query: 509 GDYW 512
GDYW
Sbjct: 702 GDYW 705
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 190/362 (52%), Gaps = 38/362 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + LV +Y C + +A LFD++ +R+L W V+I YA G ++ L+
Sbjct: 60 GLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLF 119
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ E G+VPD + AC+ L A+ + R I + + R K++ DV +G A+IDMYAKC
Sbjct: 120 EKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKC 179
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
CV +AR++FD++ E++ P + TL +++
Sbjct: 180 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLL 239
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A +D+ L GR +H ++ +L+ V ALVDMY KC ++ AR LF+++ E+ +V
Sbjct: 240 YACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLV 299
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W MI GYA G++ ++L LF+KM++E V PD + V V+ AC++ G + R + +
Sbjct: 300 TWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYI 359
Query: 268 VR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
R + +D V T M+D+ G ++ A ++ +M K + W A++ + HG +
Sbjct: 360 QRKKFQLD--VILGTAMIDMHAKCGCVESAREIFDRMEEK-NVISWSAMIAAYGYHGQGR 416
Query: 327 LA 328
A
Sbjct: 417 KA 418
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 163/330 (49%), Gaps = 40/330 (12%)
Query: 44 LIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK 103
++ +A G Y + L+ G PDN+T PF ++AC L ++ GR IH V +
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 104 WETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------------------------- 138
+ D FV AAL+DMY KC + +AR +FDK+ ERD
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 139 --------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCG 190
P + +VTV+ A A + A+ + R + + R +F+L+V + TA++DMYAKCG
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180
Query: 191 LVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLS 249
V+ AR +F+++ EK V+SW+AMI Y HG KALDLF M + PD IT +L
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240
Query: 250 ACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTC--MVDLLGHSGRLDEACDLIMQMRVKP 307
ACS GR+ + Y + H+ C +VD+ G +++A L +M +
Sbjct: 241 ACSDLKNLQMGRLIHHIV---YKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPER- 296
Query: 308 DPGVWGALLNSCKLHGHVKLAELALEKLIE 337
D W ++ G+ + + +K+ E
Sbjct: 297 DLVTWTVMIGGYAECGNANESLVLFDKMRE 326
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/551 (42%), Positives = 353/551 (64%), Gaps = 40/551 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF P LATKL++++S D + NA ++FD+ +R +++WN L RA A G +ELY
Sbjct: 99 GFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELY 158
Query: 62 YRLLEIGLVPDNFTFPFALKACSA----LSAIEEGRRIHEDVIRNKWETDVFVGAALIDM 117
R+ +G+ D FT+ + LKAC A +S +++G+ IH ++R+ + V V L+DM
Sbjct: 159 PRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDM 218
Query: 118 YAKCSCVVNARQVFDKILERD-----------------------------------PSEA 142
YA+ CV A VFD++ ++ P+
Sbjct: 219 YARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSV 278
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T+V+V+ A A AAL QG+ +H + R + + V +AL+ MYA+CG ++ + +F+++
Sbjct: 279 TMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRM 338
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR 261
+K VV WN++I+ Y +HG+ KA+ +FE+M D P HI+F+ VL ACS GL +EG+
Sbjct: 339 HKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGK 398
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
FESMV+++ I PSV+HY CMVDLLG + RLDEA +I +R++P P VWG+LL +C++
Sbjct: 399 KLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRI 458
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
H HV+LAE A ++L +LEP +AGNYV+L++IYA A W+ V +++KL+ R ++K S
Sbjct: 459 HCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRS 518
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMI 441
WIEV+ K ++F S D +P ++++A L L MK+ GY P T+ V +D++ +EK ++
Sbjct: 519 WIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIV 578
Query: 442 CCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF 501
HSE+LA+AFGLINT G + ITKNL++C+DCH KFISK +REI VRD+NR+HHF
Sbjct: 579 LGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHF 638
Query: 502 KDGICSCGDYW 512
KDG+CSCGDYW
Sbjct: 639 KDGVCSCGDYW 649
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 162/351 (46%), Gaps = 46/351 (13%)
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
P T + + + +++ + +H+ ++ ++ D F+ LI+M+++ V NAR+V
Sbjct: 67 PTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKV 126
Query: 131 FDK------------------------ILERDPS-------------EATLVTVISASAD 153
FDK +LE P L +++
Sbjct: 127 FDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECL 186
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
++ L +G+E+H RH + +V V T L+DMYA+ G V A +F+++ K VVSW+AM
Sbjct: 187 VSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAM 246
Query: 214 ITGYAMHGHSTKALDLFEKM----KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
I YA +G +AL+LF +M D V P+ +T V VL AC+ ++G++ ++R
Sbjct: 247 IACYAKNGKPYEALELFREMMLNTHDSV-PNSVTMVSVLQACAAFAALEQGKLIHAYILR 305
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+D + + ++ + G+L E+ LI K D +W +L++S LHG+ + A
Sbjct: 306 R-GLDSILPVISALITMYARCGKL-ESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAI 363
Query: 330 LALEKLIE--LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
E++I+ P +L EG ++ + GI+ S+
Sbjct: 364 KIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSV 414
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/545 (44%), Positives = 339/545 (62%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+ +YS C + +A +FD++ ++++ W +I A +G A+ +Y
Sbjct: 358 GFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVY 417
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + G+ P+ T+ L ACS+ +A+E GRRIH+ V+ TD VG L++MY+ C
Sbjct: 418 QEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMC 477
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
V +ARQVFD++++RD P + T + ++
Sbjct: 478 GSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINML 537
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A A+ +L RE+H + F + V ALV YAKCG A +FE++ ++ V+
Sbjct: 538 NACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVI 597
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNA+I G A HG AL LFE+MK E V+PD +TFV +LSACS GL +EGR +F SM
Sbjct: 598 SWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSM 657
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+D+ I P+++HY CMVDLLG +G+LDEA LI M + + +WGALL +C++HG+V +
Sbjct: 658 SQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPV 717
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE A E ++L+ +A YV LS++YA A W+ AKLRKLM RG+ K SWI+V +
Sbjct: 718 AERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGD 777
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K H F++ D SHP ++IYA+L L MK GYVP T SV HDV+ EK N +C HSER
Sbjct: 778 KLHYFVAEDRSHPQSEKIYAELDRLTHAMKMKGYVPDTRSVMHDVDEGEKENAVCHHSER 837
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIA+GLI+TP GTR+ I KNL++C DCH A KFISKI +REI RDVNR+HHFKDG+CS
Sbjct: 838 LAIAYGLISTPPGTRIHIFKNLRVCPDCHTATKFISKIVDREIIARDVNRFHHFKDGVCS 897
Query: 508 CGDYW 512
CGDYW
Sbjct: 898 CGDYW 902
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 209/413 (50%), Gaps = 49/413 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G F +A ++++Y+ C + A ++FD++ ++++ W + I YA G E A E++
Sbjct: 156 GLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIF 215
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ + G+VP+ T+ L A S+ +A++ G+ +H ++ E+D VG AL+ MYAKC
Sbjct: 216 QKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKC 275
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ RQVF+K++ RD P++ T V ++
Sbjct: 276 GSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILL 335
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A + AAL G+E+H + F ++ V+ AL+ MY++CG +K AR +F+++ K V+
Sbjct: 336 NACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVI 395
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SW AMI G A G +AL ++++M+ V+P+ +T+ +L+ACS + GR + +
Sbjct: 396 SWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQV 455
Query: 268 VR-----DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
V D H+ + +V++ G + +A + +M ++ D + A++ H
Sbjct: 456 VEAGLATDAHVGNT------LVNMYSMCGSVKDARQVFDRM-IQRDIVAYNAMIGGYAAH 508
Query: 323 GHVKLAELALEKLIE--LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRG 373
K A ++L E L+P D Y+ + N A + + E ++ L+ G
Sbjct: 509 NLGKEALKLFDRLQEEGLKP-DKVTYINMLNACANSGSLEWAREIHTLVRKGG 560
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 217/486 (44%), Gaps = 96/486 (19%)
Query: 13 LVHLYSACDCLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
L+++Y C + A Q++ ++ +R + WN ++ Y G E A++L ++ + GL
Sbjct: 64 LINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLA 123
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD T L +C + A+E GR IH ++ DV V +++MYAKC + AR+V
Sbjct: 124 PDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREV 183
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
FDK+ ++ P+ T ++V++A + AAL
Sbjct: 184 FDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAAL 243
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
G+ +H E + V TALV MYAKCG K R +FE+L + +++WN MI G
Sbjct: 244 KWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGL 303
Query: 218 AMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSAC------------------------- 251
A G+ +A +++ +M+ E V P+ IT+V +L+AC
Sbjct: 304 AEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDI 363
Query: 252 ----------SRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
SR G + R+ F+ MVR V +T M+ L SG EA +
Sbjct: 364 GVQNALISMYSRCGSIKDARLVFDKMVR-----KDVISWTAMIGGLAKSGFGAEALTVYQ 418
Query: 302 QMR---VKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE-PHDAGNYVILSNIYARAA 357
+M+ V+P+ + ++LN+C ++ ++++E DA L N+Y+
Sbjct: 419 EMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMC- 477
Query: 358 NWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK 417
G K + + DR I++ I +A + G A+H E LK + R++
Sbjct: 478 ---GSVKDARQVFDRMIQRDIVAY--------NAMIGGYAAHNLGKE---ALKLFD-RLQ 522
Query: 418 EAGYVP 423
E G P
Sbjct: 523 EEGLKP 528
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 180/408 (44%), Gaps = 99/408 (24%)
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
A+++ L + G ++ + LK C + + GR++H+ +I+++ D + ALI+
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 117 MYAKCSCVVNARQVFDKI--LERD---------------------------------PSE 141
MY +C + ARQV+ K+ +ER P
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
T+++ +S+ AL GRE+H + + +VKV +++MYAKCG ++ AR +F++
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACS-------- 252
+ +K VVSW I GYA G S A ++F+KM+ E V P+ IT++ VL+A S
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246
Query: 253 ---------------------------RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
+ G + + R FE +V + + + M+
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLV-----NRDLIAWNTMIG 301
Query: 286 LLGHSGRLDEACDLIMQMR---VKPDPGVWGALLNSC----KLHG----HVKLAELALEK 334
L G +EA ++ QM+ V P+ + LLN+C LH H ++A+
Sbjct: 302 GLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTS 361
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSW 382
D G L ++Y+R G K +L+ D+ ++K + SW
Sbjct: 362 -------DIGVQNALISMYSRC----GSIKDARLVFDKMVRKDV-ISW 397
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 234/545 (42%), Positives = 349/545 (64%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+G + T L+ +Y+ C L +AH++F++I ++N+ WN +I AY + Y+ A+ +
Sbjct: 443 GYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATF 502
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
LL+ G+ P++ TF L C + ++E G+ +H +++ E+D+ V AL+ M+ C
Sbjct: 503 QALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNC 562
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+++A+ +F+ + +RD P + T ++
Sbjct: 563 GDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLL 622
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A A AL +GR LH F+ +V V T L+ MY KCG ++ A +F +L +K V
Sbjct: 623 NACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVY 682
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SW +MI GYA HG +AL+LF +M+ E V+PD ITFVG LSAC+ GL +EG F+SM
Sbjct: 683 SWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM 742
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
++++I+P ++HY CMVDL G +G L+EA + I++M+V+PD VWGALL +C++H +V+L
Sbjct: 743 -KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVEL 801
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE A +K +EL+P+D G +VILSNIYA A W+ VAK+RK+M+DRG+ K SWIEV
Sbjct: 802 AEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDG 861
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K H F S D +HP +EI+A+L+ L M++ GYVP T V HDVE++EK + HSER
Sbjct: 862 KVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSER 921
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAI +GL+ TP T ++I+KNL++C DCH A KFISKIT+R+I RD NR+HHFKDG+CS
Sbjct: 922 LAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCS 981
Query: 508 CGDYW 512
CGD+W
Sbjct: 982 CGDFW 986
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 194/386 (50%), Gaps = 42/386 (10%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P + L+++Y+ C +A Q+FD + +++++ WN+L+ Y +G YE A +L+
Sbjct: 140 GVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLH 199
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++++ + PD TF L AC+ +++GR ++ +++ W+TD+FVG ALI+M+ KC
Sbjct: 200 EQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKC 259
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +A +VFD + RD P + V+++
Sbjct: 260 GDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLL 319
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A AL QG+++H ++ + V TA++ MY KCG ++ A +F+ ++ + VV
Sbjct: 320 RACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVV 379
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SW AMI G+A HG +A F KM + ++P+ +TF+ +L ACS G+ + +
Sbjct: 380 SWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHI 439
Query: 268 VR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+ Y D V+ T ++ + G L +A + ++ K + W A++ + H
Sbjct: 440 IEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITAYVQHEQYD 496
Query: 327 LAELALEKLIE--LEPHDAGNYVILS 350
A + L++ ++P+ + IL+
Sbjct: 497 NALATFQALLKEGIKPNSSTFTSILN 522
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 178/354 (50%), Gaps = 36/354 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T L++++ C + +A ++FD +P R+L W +I A +G ++ A L+ R+ E G
Sbjct: 248 VGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEG 307
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD F L+AC+ A+E+G+++H + W+T+++VG A++ MY KC + +A
Sbjct: 308 VQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDAL 367
Query: 129 QVFDKILER---------------------------------DPSEATLVTVISASADIA 155
+VFD + R +P+ T ++++ A + +
Sbjct: 368 EVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPS 427
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL +G+++ + + +V+TAL+ MYAKCG +K A +FE++ ++ VV+WNAMIT
Sbjct: 428 ALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMIT 487
Query: 216 GYAMHGHSTKALDLFEK-MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
Y H AL F+ +K+ ++P+ TF +L+ C + G+ + ++ ++
Sbjct: 488 AYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGK-WVHFLIMKAGLE 546
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ +V + + G L A +L M K D W ++ HG ++A
Sbjct: 547 SDLHVSNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVA 599
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 198/429 (46%), Gaps = 76/429 (17%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G+ + T ++ +Y+ C + +A ++FD + RN+ W +I +A +G + A
Sbjct: 341 VGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLF 400
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ +++E G+ P+ TF L ACS+ SA++ G++I + +I + +D V AL+ MYAK
Sbjct: 401 FNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAK 460
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + +A +VF+KI +++ P+ +T ++
Sbjct: 461 CGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSI 520
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
++ +L G+ +H + E ++ V ALV M+ CG + A+NLF + ++ +
Sbjct: 521 LNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDL 580
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMF--- 263
VSWN +I G+ HG + A D F+ M++ ++PD ITF G+L+AC+ EGR
Sbjct: 581 VSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHAL 640
Query: 264 -------------------------FESMVRDYHIDP--SVQHYTCMVDLLGHSGRLDEA 296
E + +H P +V +T M+ GR EA
Sbjct: 641 ITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEA 700
Query: 297 CDLIMQMR---VKPDPGVWGALLNSCKLHGHVKLAELALE-----KLIELEPHDAGNYVI 348
+L QM+ VKPD + L++C H L E L K +EP +Y
Sbjct: 701 LELFYQMQQEGVKPDWITFVGALSAC---AHAGLIEEGLHHFQSMKEFNIEPR-MEHYGC 756
Query: 349 LSNIYARAA 357
+ +++ RA
Sbjct: 757 MVDLFGRAG 765
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 169/336 (50%), Gaps = 38/336 (11%)
Query: 42 NVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR 101
N ++ + G + A+++ R+ + T+ L+ C + +G RI+ + +
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 102 NKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----------------------- 138
+ + D+F+ LI+MYAKC ++A+Q+FD + E+D
Sbjct: 139 SGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198
Query: 139 ----------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
P + T V++++A AD + +GREL+ + ++ ++ V TAL++M+ K
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGV 247
CG + A +F+ L + +V+W +MITG A HG +A +LF++M++E VQPD + FV +
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
L AC+ ++G+ M ++ D + T ++ + G +++A ++ ++ +
Sbjct: 319 LRACNHPEALEQGKKVHARM-KEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGR- 376
Query: 308 DPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPH 341
+ W A++ HG + A L K+IE +EP+
Sbjct: 377 NVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPN 412
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 155/353 (43%), Gaps = 63/353 (17%)
Query: 113 ALIDMYAKCSCVVNARQVFDKILERDPS-----EATLVTVISASADIAALPQGRELHGFS 167
A+++ +K A QV +++ D S T ++ L G ++
Sbjct: 80 AVLNRLSKAGQFNEAMQVLERV---DSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHI 136
Query: 168 WRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKAL 227
+ + ++ ++ L++MYAKCG A+ +F+ +REK V SWN ++ GY HG +A
Sbjct: 137 KKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAF 196
Query: 228 DLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGR--------------MFFESMVRDYH 272
L E+M +D V+PD TFV +L+AC+ D+GR +F + + + H
Sbjct: 197 KLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMH 256
Query: 273 ID--------------PS--VQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWG 313
I P+ + +T M+ L GR +AC+L +M V+PD +
Sbjct: 257 IKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFV 316
Query: 314 ALLNSCKLHGHVKLAELALEKLIELEPHDAGNYV---ILSNIYARAANWEGVAKLRKLMI 370
+LL +C ++ + ++ E+ D YV ILS +Y + + E ++ L+
Sbjct: 317 SLLRACNHPEALEQGKKVHARMKEV-GWDTEIYVGTAILS-MYTKCGSMEDALEVFDLVK 374
Query: 371 DRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVP 423
R + SW A ++G A H DE + +M E+G P
Sbjct: 375 GRNV-----VSWT-------AMIAGFAQHGRIDEAFLFFN----KMIESGIEP 411
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 232/539 (43%), Positives = 335/539 (62%), Gaps = 34/539 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++A KL+++ + L AH LF+++ +R+ W+V+I + NG YE + + L+
Sbjct: 36 IVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRA 95
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G PDNF+ PF +KAC + GR IH V++N D FV + L+DMYAKC + NA
Sbjct: 96 GSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNA 155
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
+Q+FD++ ++D P + +VT+++A A +
Sbjct: 156 KQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKL 215
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
A+ + R +H + R+ L+V++ TA++DMYAKCG + +R +F+++ +K V+SW+AMI
Sbjct: 216 GAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMI 275
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
Y HG +AL+LF M + + P+ ITF+ +L ACS GL D+G F M Y +
Sbjct: 276 GAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGV 335
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P V+HYTCMVDLLG +GRLD+A LI M V+ D G+W A L +C++H V LAE A +
Sbjct: 336 RPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAK 395
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
L+ L+ + G+Y++LSNIYA A W+ VAK+R LM R +KK +WIEV N + F
Sbjct: 396 LLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFG 455
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
+GD SH +EIY LK L +++ AGYVP T SV HDV+ + K ++ HSE+LAIAFG
Sbjct: 456 AGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHDVDEEVKLGILHAHSEKLAIAFG 515
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LI TPDGT + ITKNL++C DCH K +S IT+R+I VRD NR+HHFK+GICSCGDYW
Sbjct: 516 LIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQRDIIVRDANRFHHFKEGICSCGDYW 574
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/536 (44%), Positives = 334/536 (62%), Gaps = 35/536 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ +Y+ C L +A +F+RI ++N+ WN +I AY + Y+ A+ + LL+ G+
Sbjct: 446 TALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIK 505
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD+ TF L C + A+E G+ + +IR +E+D+ + AL+ M+ C +++A +
Sbjct: 506 PDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNL 565
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F+ + ERD P + T +++A A AL
Sbjct: 566 FNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEAL 625
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
+GR LH + +V V T L+ MY KCG + A +F L +K V SW +MITGY
Sbjct: 626 TEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGY 685
Query: 218 AMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
A HG +AL+LF +M+ E V+PD ITFVG LSAC+ GL EG FESM +D++I+P
Sbjct: 686 AQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPR 744
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
++HY CMVDL G +G L EA + I +M+VKPD +WGALL +C++H V+LAE +K +
Sbjct: 745 MEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKL 804
Query: 337 ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGD 396
EL+P+D G YVILSNIYA A W+ V K+RK+M+DRG+ K SWIEV + H F S D
Sbjct: 805 ELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDD 864
Query: 397 ASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLIN 456
+HP +EI+A+L L MK+ GYVP T V HDVE+ EK + +C HSERLAIA+GL+
Sbjct: 865 KTHPQIEEIHAELGRLHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLK 924
Query: 457 TPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
TP T ++I+KNL++C DCH A K ISKIT+R+I RD NR+HHFKDG+CSCGD+W
Sbjct: 925 TPPLTPIVISKNLRVCGDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 180/354 (50%), Gaps = 36/354 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T L+ +Y+ C + +A ++F+ + RN+ W +I +A +G E A + +++E G
Sbjct: 343 VGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESG 402
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P+ TF L ACS SA+++GR+IH+ +I+ + TD V AL+ MYAKC +++AR
Sbjct: 403 IEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDAR 462
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
VF++I +++ P +T ++++
Sbjct: 463 NVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPD 522
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL G+ + R FE ++ ++ ALV M+ CG + A NLF + E+ +VSWN +I
Sbjct: 523 ALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIA 582
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+ HG + A D F+ M++ V+PD ITF G+L+AC+ EGR +++ + +D
Sbjct: 583 GFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRR-LHALITEAALD 641
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
V T ++ + G +D+A L+ K + W +++ HG K A
Sbjct: 642 CDVVVGTGLISMYTKCGSIDDA-HLVFHNLPKKNVYSWTSMITGYAQHGRGKEA 694
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 200/403 (49%), Gaps = 41/403 (10%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ +Y+ C ++A Q+FD +P ++++ WN+L+ Y + YE A L+ ++++ G+ PD
Sbjct: 145 LISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPD 204
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+TF + L AC+ +++G + ++ W+TD+FVG ALI+M+ KC V +A +VF+
Sbjct: 205 KYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFN 264
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
+ RD P + V+++ A AL Q
Sbjct: 265 NLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQ 324
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G+ +H + + V TAL+ MY KCG ++ A +F ++ + VVSW AMI G+A
Sbjct: 325 GKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQ 384
Query: 220 HGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSV 277
HG +A F KM + ++P+ +TF+ +L ACSR +GR + +++ Y D V
Sbjct: 385 HGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRV 444
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+ T ++ + G L +A ++ ++ K + W A++ + H A + L++
Sbjct: 445 R--TALLSMYAKCGSLMDARNVFERIS-KQNVVAWNAMITAYVQHEKYDNAVATFQALLK 501
Query: 338 --LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
++P D+ + + N+ E ++ L+I G + +
Sbjct: 502 EGIKP-DSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDL 543
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 179/354 (50%), Gaps = 36/354 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T L++++ C + +A ++F+ +P+R+L W +I A + ++ A L+ + E G
Sbjct: 242 VGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEG 301
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD F LKAC+ A+E+G+R+H + +T+++VG AL+ MY KC + +A
Sbjct: 302 VQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDAL 361
Query: 129 QVFDKILER---------------------------------DPSEATLVTVISASADIA 155
+VF+ + R +P+ T ++++ A + +
Sbjct: 362 EVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPS 421
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL QGR++H + + + +V+TAL+ MYAKCG + ARN+FE++ ++ VV+WNAMIT
Sbjct: 422 ALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMIT 481
Query: 216 GYAMHGHSTKALDLFEK-MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
Y H A+ F+ +K+ ++PD TF +L+ C + G+ + +S++ +
Sbjct: 482 AYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGK-WVQSLIIRAGFE 540
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ +V + + G L A +L M + D W ++ HG + A
Sbjct: 541 SDLHIRNALVSMFVNCGDLMSAMNLFNDMPER-DLVSWNTIIAGFVQHGENQFA 593
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 163/337 (48%), Gaps = 43/337 (12%)
Query: 75 TFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI 134
T+ L+ C + +G RIH + +K + D+F+ LI MYAKC +A+Q+FD++
Sbjct: 106 TYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEM 165
Query: 135 LERD---------------------------------PSEATLVTVISASADIAALPQGR 161
++D P + T V +++A AD + +G
Sbjct: 166 PDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGG 225
Query: 162 ELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHG 221
EL ++ ++ V TAL++M+ KCG V A +F L + +++W +MITG A H
Sbjct: 226 ELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHR 285
Query: 222 HSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHY 280
+A +LF+ M++E VQPD + FV +L AC+ ++G+ M ++ +D +
Sbjct: 286 QFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARM-KEVGLDTEIYVG 344
Query: 281 TCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--L 338
T ++ + G +++A ++ ++ + + W A++ HG ++ A L K+IE +
Sbjct: 345 TALLSMYTKCGSMEDALEVFNLVKGR-NVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGI 403
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIK 375
EP N V +I + + + R++ DR IK
Sbjct: 404 EP----NRVTFMSILGACSRPSALKQGRQIH-DRIIK 435
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/546 (42%), Positives = 343/546 (62%), Gaps = 40/546 (7%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P LATKL+ +YS + A ++FD+ +R +++WN L RA G E + LY+++
Sbjct: 112 PFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNR 171
Query: 67 IGLVPDNFTFPFALKACSALSA----IEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
IG+ D FT+ + LKAC A + +G+ IH + R + + V++ L+DMYA+
Sbjct: 172 IGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFG 231
Query: 123 CVVNARQVFDKILERD-----------------------------------PSEATLVTV 147
CV A VF+ + R+ P+ T+V+V
Sbjct: 232 CVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSV 291
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A A +AAL QGR +HG+ R + + V +ALV MY +CG + V + +F+++ ++ V
Sbjct: 292 LQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDV 351
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSWN++I+ Y +HG+ KA+ +FE+M + P +TFV VL ACS GL +EG+ FES
Sbjct: 352 VSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFES 411
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M RD+ I P V+HY CMVDLLG + RLDEA ++ MR +P P VWG+LL SC++HG+V+
Sbjct: 412 MWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVE 471
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
LAE A +L LEP +AGNYV+L++IYA A W+ V +++KL+ RG++K W+EV+
Sbjct: 472 LAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVR 531
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
K ++F+S D +P ++I+A L L MKE GY+P T+ V +++E +EK ++ HSE
Sbjct: 532 RKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSE 591
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LA+AFGLINT G + ITKNL++C+DCH+ KFISK E+EI VRDVNR+H FK+G+C
Sbjct: 592 KLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVC 651
Query: 507 SCGDYW 512
SCGDYW
Sbjct: 652 SCGDYW 657
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 153/335 (45%), Gaps = 46/335 (13%)
Query: 42 NVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR 101
N LI++ G + A+ R+L P T+ + C S++ +G R+H ++
Sbjct: 50 NQLIQSLCKEGKLKQAL----RVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILD 105
Query: 102 NKWETDVFVGAALIDMYAKCSCVVNARQVFDKI--------------------------- 134
N + D F+ LI MY+ V AR+VFDK
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 135 --------LERDPSEATLVTVISASADIAA--LPQGRELHGFSWRHRFELNVKVKTALVD 184
+E D T V +++ A L +G+E+H R + +V + T LVD
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVD 225
Query: 185 MYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ---PDH 241
MYA+ G V A +F + + VVSW+AMI YA +G + +AL F +M E + P+
Sbjct: 226 MYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNS 285
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
+T V VL AC+ ++GR+ ++R +D + + +V + G G+LD +
Sbjct: 286 VTMVSVLQACASLAALEQGRLIHGYILRR-GLDSILPVISALVTMYGRCGKLDVGQRVFD 344
Query: 302 QMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
+M + D W +L++S +HG+ + A E+++
Sbjct: 345 RMHDR-DVVSWNSLISSYGVHGYGRKAIQIFEEML 378
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 120/258 (46%), Gaps = 37/258 (14%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ H + T LV +Y+ C+ A +F+ +P RN+ W+ +I YA NG A+ +
Sbjct: 212 GYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTF 271
Query: 62 YRLL--EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
++ P++ T L+AC++L+A+E+GR IH ++R ++ + V +AL+ MY
Sbjct: 272 REMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYG 331
Query: 120 KCSCVVNARQVFDKILERD---------------------------------PSEATLVT 146
+C + ++VFD++ +RD P+ T V+
Sbjct: 332 RCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVS 391
Query: 147 VISASADIAALPQGRELHGFSWR-HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-E 204
V+ A + + +G+ L WR H + V+ +VD+ + + A + + +R E
Sbjct: 392 VLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTE 451
Query: 205 KRVVSWNAMITGYAMHGH 222
W +++ +HG+
Sbjct: 452 PGPKVWGSLLGSCRIHGN 469
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/539 (44%), Positives = 325/539 (60%), Gaps = 34/539 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++A KLV YS L +A+ LFD + R+ W+V++ +A G Y + L+
Sbjct: 771 IVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRC 830
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G PDN+T PF ++AC L ++ GR IH V + + D FV AAL+DMY KC + +A
Sbjct: 831 GARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDA 890
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
R +FDK+ ERD P + +VTV+ A A +
Sbjct: 891 RFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKL 950
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
A+ + R + + R +F+L+V + TA++DM+AKCG V+ AR +F+++ EK V+SW+AMI
Sbjct: 951 GAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMI 1010
Query: 215 TGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
Y HG KALDLF M + + P+ IT V +L ACS GL +EG FF M DY +
Sbjct: 1011 AAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSV 1070
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
V+HYTC+VDLLG +GRLDEA LI M + D G+WGA L +C+ H V LAE A
Sbjct: 1071 RXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAAT 1130
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
L+EL+P + G+Y++LSNIYA A WE VAK+R LM R +KK +WIEV NK+H F
Sbjct: 1131 SLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWIEVDNKSHQFS 1190
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD +HP EIY LK L +++ GYVP T V HDV+ + K ++ HSE+LAIAFG
Sbjct: 1191 VGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFG 1250
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LI TP+ T + I KNL++C DCH K +S IT R I VRD NR+HHFK+G CSCGDYW
Sbjct: 1251 LIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 1309
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/497 (43%), Positives = 295/497 (59%), Gaps = 34/497 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+A KL++ YS L +A+ LFD + R+ W+V++ +A G Y + L+
Sbjct: 95 VVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRC 154
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G PDN+T PF ++AC L ++ GR IH V + + D FV AAL+DMY KC + +A
Sbjct: 155 GARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDA 214
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
R +FDK+ ERD P + +VTV+ A A +
Sbjct: 215 RFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKL 274
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
A+ + R + + R +F+L+V + TA++DMYAKCG V+ AR +F+++ EK V+SW+AMI
Sbjct: 275 GAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMI 334
Query: 215 TGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
Y HG KALDLF M + PD IT +L ACS GL +EG FF SM DY +
Sbjct: 335 AAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSV 394
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
V+HYTC+VDLLG +GRLDEA LI M ++ D G+WGA L +C+ H V LAE A
Sbjct: 395 RTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAAT 454
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
L+EL+ + G+YV+LSNIYA A WE VAK+R LM R +KK+ +WIEV NK+H F
Sbjct: 455 SLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFS 514
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD +HP EIY LK L +++ GYVP T V HDV+ + K ++ HSE+LAIAFG
Sbjct: 515 VGDTTHPRSKEIYEMLKSLSNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFG 574
Query: 454 LINTPDGTRLLITKNLK 470
LI TP+ T + I KNL+
Sbjct: 575 LIATPEHTPIRIIKNLR 591
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 7/193 (3%)
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
ISA + L Q R++H + H N+ V L+ Y+ + A LF+ + +
Sbjct: 66 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 125
Query: 208 VSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSW+ M+ G+A G F E ++ +PD+ T V+ AC GR+
Sbjct: 126 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRL-IHH 184
Query: 267 MVRDYHIDPSVQHYTC--MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+V + +D + H+ C +VD+ +++A L +M+ + D W ++ G
Sbjct: 185 IVYKFGLD--LDHFVCAALVDMYVKCREIEDARFLFDKMQER-DLVTWTVMIGGYAECGK 241
Query: 325 VKLAELALEKLIE 337
+ + EK+ E
Sbjct: 242 ANESLVLFEKMRE 254
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 7/184 (3%)
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
L Q R++H + H N+ V LV Y+ + A LF+ + + VSW+ M+ G
Sbjct: 751 LTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGG 810
Query: 217 YAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
+A G F E ++ +PD+ T V+ AC GR+ +V + +D
Sbjct: 811 FAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRL-IHHIVYKFGLD- 868
Query: 276 SVQHYTC--MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
+ H+ C +VD+ G +++A L +M + D W ++ G+ + + +
Sbjct: 869 -LDHFVCAALVDMYGKCREIEDARFLFDKMXER-DLVTWTVMIGGYAECGNANESLVLFD 926
Query: 334 KLIE 337
K+ E
Sbjct: 927 KMRE 930
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 239/551 (43%), Positives = 355/551 (64%), Gaps = 40/551 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF P LATKL+++YS D + NA ++FD+ R ++++N L RA + G E + +Y
Sbjct: 100 GFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMY 159
Query: 62 YRLLEIGLVPDNFTFPFALKACSA----LSAIEEGRRIHEDVIRNKWETDVFVGAALIDM 117
R+ IG+ D FT+ + LKAC A +S + +GR IH ++R+ ++ V + L+DM
Sbjct: 160 RRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDM 219
Query: 118 YAKCSCVVNARQVFDKILERD-----------------------------------PSEA 142
YAK CV NA VF+++ ++ P+
Sbjct: 220 YAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSV 279
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T+V+V+ A A +AAL QGR +HG+ R + + V +ALV MYA+CG +++ + +F+Q+
Sbjct: 280 TMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQM 339
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGR 261
++ VVSWN++I+ Y +HG KA+ +FE+M + V+P I+FV VL ACS GL DEG+
Sbjct: 340 DKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEGK 399
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
M F SM + I PSV+HY CMVDLLG + RL+EA +I MR++P P VWG+LL SC++
Sbjct: 400 MLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGSCRI 459
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
H +V+LAE A +L +LEP +AGNYV+L++IYA A W+GV +++KL+ RG++K S
Sbjct: 460 HCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLLEARGLQKVPGRS 519
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMI 441
WIEVK K ++F+S D +P ++++A L L +KE GYVP T+ V +D++ EK ++
Sbjct: 520 WIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEEGYVPQTKVVLYDLKAAEKERIV 579
Query: 442 CCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF 501
HSE+LA+AFGLIN+ G + ITK+L++C+DCH KFISK +EI VRDVNR+HHF
Sbjct: 580 LGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTKFISKFANKEILVRDVNRFHHF 639
Query: 502 KDGICSCGDYW 512
+DG+CSCGDYW
Sbjct: 640 RDGVCSCGDYW 650
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 157/327 (48%), Gaps = 46/327 (14%)
Query: 42 NVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR 101
N LI++ G A+EL L + P T+ + +C+ +++ + +R+H ++
Sbjct: 43 NKLIQSLCKQGNLTQALEL----LSLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLE 98
Query: 102 NKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----------------------- 138
N ++ D F+ LI+MY+ + NAR+VFDK R
Sbjct: 99 NGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNM 158
Query: 139 ---------PSEA-----TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVD 184
PS+ L +++ ++ L +GRE+H RH ++ V + T LVD
Sbjct: 159 YRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVD 218
Query: 185 MYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ---PDH 241
MYAK G V A +F Q+ K VVSW+AMI YA +G + +AL+LF ++ E Q P+
Sbjct: 219 MYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNS 278
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
+T V VL AC+ ++GR+ ++R +D + + +V + G+L+ +
Sbjct: 279 VTMVSVLQACAALAALEQGRLIHGYILRK-GLDSILPVISALVTMYARCGKLELGQRVFD 337
Query: 302 QMRVKPDPGVWGALLNSCKLHGHVKLA 328
QM K D W +L++S +HG K A
Sbjct: 338 QMD-KRDVVSWNSLISSYGVHGFGKKA 363
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/545 (42%), Positives = 335/545 (61%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF F + L+ +Y+ C + +A LF+++ ++++ W +I A +G A+ ++
Sbjct: 476 GFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVF 535
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + GL P+ T+ L ACS+ +A++ GRRIH+ VI TD V L++MY+ C
Sbjct: 536 QDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMC 595
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
V +ARQVFD++ +RD P + T + ++
Sbjct: 596 GSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINML 655
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A A+ +L +E+H + + + + ALV YAKCG A +F+++ ++ V+
Sbjct: 656 NACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVI 715
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNA+I G A HG L LFE+MK E ++PD +TFV +LSACS GL +EGR +F SM
Sbjct: 716 SWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSM 775
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
RD+ I P+++HY CMVDLLG +G+LDE LI M + + +WGALL +C++HG+V +
Sbjct: 776 SRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPV 835
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE A E ++L+P +A YV LS++YA A W+ AKLRKLM RG+ K SWIEV +
Sbjct: 836 AERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGD 895
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K H F++ D SHP ++IYA+L L MK GYVP T SV HDV+ EK N +C HSER
Sbjct: 896 KLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDTRSVMHDVDEGEKENAVCHHSER 955
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIA+GLI+T GT + I KNL++C DCH A KFI+KI +REI RDVNR+HHFKDG+CS
Sbjct: 956 LAIAYGLISTLPGTPIRIFKNLRVCPDCHTATKFITKIVDREIVARDVNRFHHFKDGVCS 1015
Query: 508 CGDYW 512
CGDYW
Sbjct: 1016 CGDYW 1020
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 207/410 (50%), Gaps = 49/410 (11%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
F +A ++++Y+ C +H A ++FD++ +++ W ++I YA G E+A E++ ++
Sbjct: 277 FDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKM 336
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
+ G+VP+ T+ L A S +A++ G+ +H ++ E+D+ VG AL+ MYAKC
Sbjct: 337 QQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSY 396
Query: 125 VNARQVFDKILERD---------------------------------PSEATLVTVISAS 151
+ RQVF+K++ RD P++ T V +++A
Sbjct: 397 KDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNAC 456
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+ AL GRE+H + F ++ V+ AL+ MYA+CG +K AR LF ++ K ++SW
Sbjct: 457 VNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWT 516
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR- 269
AMI G A G +AL +F+ M+ ++P+ +T+ +L+ACS D GR + ++
Sbjct: 517 AMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEA 576
Query: 270 ----DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
D H+ + +V++ G + +A + +M + D + A++ H
Sbjct: 577 GLATDAHVANT------LVNMYSMCGSVKDARQVFDRM-TQRDIVAYNAMIGGYAAHNLG 629
Query: 326 KLAELALEKLIE--LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRG 373
K A ++L E L+P D Y+ + N A + + E ++ L++ G
Sbjct: 630 KEALKLFDRLQEEGLKP-DKVTYINMLNACANSGSLEWAKEIHSLVLKDG 678
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 181/350 (51%), Gaps = 38/350 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T LV +Y+ C + Q+F+++ R+L WN +I A G +E A E+Y+++ G
Sbjct: 382 VGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREG 441
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
++P+ T+ L AC +A+ GR IH V+++ + D+ V ALI MYA+C + +AR
Sbjct: 442 MMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDAR 501
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+F+K++ +D P+ T ++++A + A
Sbjct: 502 LLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPA 561
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL GR +H + V LV+MY+ CG VK AR +F+++ ++ +V++NAMI
Sbjct: 562 ALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIG 621
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD-YHI 273
GYA H +AL LF+++++E ++PD +T++ +L+AC+ G + + +++D Y
Sbjct: 622 GYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLS 681
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
D S+ + +V G +A L+ +K + W A++ C HG
Sbjct: 682 DTSLGN--ALVSTYAKCGSFSDAL-LVFDKMMKRNVISWNAIIGGCAQHG 728
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 214/481 (44%), Gaps = 86/481 (17%)
Query: 13 LVHLYSACDCLHNAHQLFDRI--PQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
L+++Y C + A Q+++++ +R + WN ++ Y G E A++L + + GL
Sbjct: 182 LINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLA 241
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
T L +C + SA+E GR IH + ++ + DV V +++MYAKC + AR+V
Sbjct: 242 LGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREV 301
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
FDK+ + P+ T + V++A + AAL
Sbjct: 302 FDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAAL 361
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
G+ +H E ++ V TALV MYAKCG K R +FE+L + +++WN MI G
Sbjct: 362 KWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGL 421
Query: 218 AMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD-YHIDP 275
A G+ +A +++ +M+ E + P+ IT+V +L+AC GR +V+D + D
Sbjct: 422 AEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDI 481
Query: 276 SVQH-----------------------------YTCMVDLLGHSGRLDEACDLIMQMR-- 304
SVQ+ +T M+ L SG EA + M+
Sbjct: 482 SVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQA 541
Query: 305 -VKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE-PHDAGNYVILSNIYARAANWEGV 362
+KP+ + ++LN+C + +++IE DA L N+Y+ G
Sbjct: 542 GLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMC----GS 597
Query: 363 AKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYV 422
K + + DR ++ I +A + G A+H E LK + R++E G
Sbjct: 598 VKDARQVFDRMTQRDIVAY--------NAMIGGYAAHNLGKE---ALKLFD-RLQEEGLK 645
Query: 423 P 423
P
Sbjct: 646 P 646
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 152/337 (45%), Gaps = 79/337 (23%)
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
A+++ L + G ++ + LK C + + GR +HE +I++ D + ALI+
Sbjct: 125 AMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALIN 184
Query: 117 MYAKCSCVVNARQVFDKI----------------------------LERDPSE------- 141
MY +C + ARQV++K+ L R+ +
Sbjct: 185 MYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGR 244
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
AT + ++S+ +AL GRE+H + + R +V V +++MYAKCG + AR +F++
Sbjct: 245 ATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDK 304
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACS-------- 252
+ K VVSW +I GYA GHS A ++F+KM+ E V P+ IT++ VL+A S
Sbjct: 305 METKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWG 364
Query: 253 ---------------------------RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
+ G + + R FE +V + + + M+
Sbjct: 365 KTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLV-----NRDLIAWNTMIG 419
Query: 286 LLGHSGRLDEACDLIMQMR---VKPDPGVWGALLNSC 319
L G +EA ++ QM+ + P+ + LLN+C
Sbjct: 420 GLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNAC 456
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/546 (43%), Positives = 352/546 (64%), Gaps = 40/546 (7%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P LATKL+++YS D + NA ++FD+ +R +++WN L RA G ++LY R+
Sbjct: 113 PFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNR 172
Query: 67 IGLVPDNFTFPFALKACSA----LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
IG+ D FT+ + LKAC A +S + GR IH ++R+ +E V + L+DMYA+
Sbjct: 173 IGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFG 232
Query: 123 CVVNARQVFDKILERD-----------------------------------PSEATLVTV 147
CV+NA +VFD++ ++ P+ T+V+V
Sbjct: 233 CVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSV 292
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A A +AAL QG+ +HG+ R + + V +ALV +YA+CG +++ +FE++ ++ V
Sbjct: 293 LQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDV 352
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSWN++I+ Y +HG KA+ +F++M D+ + P I+FV VL ACS GL +EG++ FES
Sbjct: 353 VSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFES 412
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
MVR + I PSV+HY CMVDLLG + RLDEA +I MR++P P VWG+LL SC++H +V+
Sbjct: 413 MVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVE 472
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
LAE A +L ELEP +AGNYV+L++IYA A W V +++ L+ RG++K S IE++
Sbjct: 473 LAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQKVPGRSCIEIR 532
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
K ++F+S D +P ++++A L L MKE GYVP T+ V +D++ +EK ++ HSE
Sbjct: 533 RKIYSFMSVDEFNPQIEQLHALLLKLSMEMKEKGYVPDTKVVLYDLDPEEKERIVLGHSE 592
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LA+AFGLIN+ G + ITKNL++C+DCH KFISK REI VRDVNR+H F+DG+C
Sbjct: 593 KLALAFGLINSKKGETIRITKNLRLCEDCHSVTKFISKFANREILVRDVNRFHLFQDGVC 652
Query: 507 SCGDYW 512
SCGDYW
Sbjct: 653 SCGDYW 658
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 151/307 (49%), Gaps = 42/307 (13%)
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
P T+ + +C+ +++ +G +H +I + + D F+ LI+MY++ + NAR+V
Sbjct: 76 PTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKV 135
Query: 131 FDKILERD--------------------------------PSEA-----TLVTVISASAD 153
FDK +R PS+ L +++ A
Sbjct: 136 FDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAF 195
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
++ L GRE+HG RH FE +V + T L+DMYA+ G V A +F+Q+ K VVSW+AM
Sbjct: 196 VSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAM 255
Query: 214 ITGYAMHGHSTKALDLFEKMKDEVQ---PDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
I Y+ +G +AL+LF KM E Q P+ +T V VL AC+ ++G++ ++R
Sbjct: 256 IACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRR 315
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
+D + + +V + G L+ + +M K D W +L++S +HG + A
Sbjct: 316 -GLDSILPVVSALVTVYARCGNLELGHRVFERME-KRDVVSWNSLISSYGIHGFGRKAIQ 373
Query: 331 ALEKLIE 337
+++I+
Sbjct: 374 IFKEMID 380
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/546 (41%), Positives = 345/546 (63%), Gaps = 40/546 (7%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P LATKL+ +YS + A ++FD+ +R +++WN L RA G E + LY+++
Sbjct: 112 PFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNR 171
Query: 67 IGLVPDNFTFPFALKACSA----LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
IG+ D FT+ + LKAC A ++ + +G+ IH + R + + V++ L+DMYA+
Sbjct: 172 IGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFG 231
Query: 123 CVVNARQVFDKILERD-----------------------------------PSEATLVTV 147
CV A VF + R+ P+ T+V+V
Sbjct: 232 CVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSV 291
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A A +AAL QG+ +HG+ R + + V +ALV MY +CG ++V + +F+++ ++ V
Sbjct: 292 LQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDV 351
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSWN++I+ Y +HG+ KA+ +FE+M + P +TFV VL ACS GL +EG+ FE+
Sbjct: 352 VSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFET 411
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M RD+ I P ++HY CMVDLLG + RLDEA ++ MR +P P VWG+LL SC++HG+V+
Sbjct: 412 MWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVE 471
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
LAE A +L LEP +AGNYV+L++IYA A W+ V +++KL+ RG++K W+EV+
Sbjct: 472 LAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVR 531
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
K ++F+S D +P ++I+A L L MKE GY+P T+ V +++E +EK ++ HSE
Sbjct: 532 RKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSE 591
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LA+AFGLINT G + ITKNL++C+DCH+ KFISK E+EI VRDVNR+H FK+G+C
Sbjct: 592 KLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVC 651
Query: 507 SCGDYW 512
SCGDYW
Sbjct: 652 SCGDYW 657
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 163/379 (43%), Gaps = 48/379 (12%)
Query: 42 NVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR 101
N LI++ G + AI R+L P T+ + C S++ + R+H ++
Sbjct: 50 NQLIQSLCKEGKLKQAI----RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 102 NKWETDVFVGAALIDMYAKCSCVVNARQVFDKI--------------------------- 134
N + D F+ LI MY+ V AR+VFDK
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 135 --------LERDPSEATLV--TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVD 184
+E D T V +++ + L +G+E+H R + +V + T LVD
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 185 MYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ---PDH 241
MYA+ G V A +F + + VVSW+AMI YA +G + +AL F +M E + P+
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
+T V VL AC+ ++G++ ++R +D + + +V + G G+L+ +
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRR-GLDSILPVISALVTMYGRCGKLEVGQRVFD 344
Query: 302 QMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHDAGNYVILSNIYARAANW 359
+M + D W +L++S +HG+ K A E+++ P +L
Sbjct: 345 RMHDR-DVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVE 403
Query: 360 EGVAKLRKLMIDRGIKKSI 378
EG + D GIK I
Sbjct: 404 EGKRLFETMWRDHGIKPQI 422
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 119/258 (46%), Gaps = 37/258 (14%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ H + T LV +Y+ C+ A +F +P RN+ W+ +I YA NG A+ +
Sbjct: 212 GYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTF 271
Query: 62 YRLLE--IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
++ P++ T L+AC++L+A+E+G+ IH ++R ++ + V +AL+ MY
Sbjct: 272 REMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYG 331
Query: 120 KCSCVVNARQVFDKILERD---------------------------------PSEATLVT 146
+C + ++VFD++ +RD P+ T V+
Sbjct: 332 RCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVS 391
Query: 147 VISASADIAALPQGRELHGFSWR-HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-E 204
V+ A + + +G+ L WR H + ++ +VD+ + + A + + +R E
Sbjct: 392 VLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTE 451
Query: 205 KRVVSWNAMITGYAMHGH 222
W +++ +HG+
Sbjct: 452 PGPKVWGSLLGSCRIHGN 469
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/545 (44%), Positives = 337/545 (61%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + T LV LY+ C L +AH++FD IP +N+ W +I Y G + AI+++
Sbjct: 142 GFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMF 201
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
RLLE+ L PD+FT L AC+ L + G IH+ ++ +VFVG +L+DMYAKC
Sbjct: 202 RRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKC 261
Query: 122 SCVVNARQVFDKILERD----------------PSEA-----------------TLVTVI 148
+ AR VFD + E+D P EA T+V V+
Sbjct: 262 GNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVL 321
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A + AL G + G R+ F N + TAL+D+YAKCG + A +F+ ++EK V
Sbjct: 322 SACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRV 381
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
WNA+I+G AM+G+ + LF ++ K ++PD TF+G+L C+ GL DEGR +F SM
Sbjct: 382 VWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSM 441
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
R + + PS++HY CMVDLLG +G LDEA LI M ++ + VWGALL +C++H +L
Sbjct: 442 YRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQL 501
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AELAL++LIELEP ++GNYV+LSNIY+ W+ AK+R M ++ I+K CSWIEV
Sbjct: 502 AELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDG 561
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
H FL GD HP ++IYAKL L +MK AGYVP T+ V D+E +EK + + CHSE+
Sbjct: 562 IVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEK 621
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGLI+ + + KNL++C DCH+AIK IS IT REITVRD NR+H F++G CS
Sbjct: 622 LAIAFGLISATPTAVIRVVKNLRVCGDCHMAIKLISSITGREITVRDNNRFHCFREGSCS 681
Query: 508 CGDYW 512
C DYW
Sbjct: 682 CNDYW 686
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/355 (34%), Positives = 192/355 (54%), Gaps = 38/355 (10%)
Query: 29 LFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSA 88
LF +I Q N+FLWN +IR N ++ AIE Y + G +P+NFTFPF LKAC+ L
Sbjct: 68 LFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLD 127
Query: 89 IEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---------- 138
++ G +IH V++ ++ DVFV +L+ +YAKC + +A +VFD I +++
Sbjct: 128 LQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISG 187
Query: 139 -----------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELN 175
P T+V V+SA + L G +H N
Sbjct: 188 YIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRN 247
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD 235
V V T+LVDMYAKCG ++ AR++F+ + EK +VSW AMI GYA++G +A+DLF +M+
Sbjct: 248 VFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQR 307
Query: 236 E-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRL 293
E V+PD T VGVLSAC+R G + G + R ++ +P + T ++DL G +
Sbjct: 308 ENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLG--TALIDLYAKCGSM 365
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
A ++ M+ K D VW A+++ ++G+VK++ ++ +L GN I
Sbjct: 366 SRAWEVFKGMKEK-DRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFI 419
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 122/275 (44%), Gaps = 38/275 (13%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG + + T LV +Y+ C + A +FD +P++++ W +I+ YA NG + AI+L
Sbjct: 242 MGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDL 301
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ + PD +T L AC+ L A+E G + V RN++ + +G ALID+YAK
Sbjct: 302 FLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAK 361
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + A +VF + E+D P T + +
Sbjct: 362 CGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGL 421
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVK--TALVDMYAKCGLVKVARNLFEQL-RE 204
+ + +GR +R F L ++ +VD+ + GL+ A L + E
Sbjct: 422 LCGCTHAGLVDEGRRYFNSMYRF-FSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPME 480
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP 239
+ W A++ +H T+ +L K E++P
Sbjct: 481 ANAIVWGALLGACRIH-RDTQLAELALKQLIELEP 514
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 39/218 (17%)
Query: 182 LVDMYAKCGL----VKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE- 236
L++M +C R LF Q+++ + WN MI G + A++ + M+ E
Sbjct: 48 LLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEG 107
Query: 237 VQPDHITFVGVLSACSR---------------GGLFDEGRMFFESMV---------RDYH 272
P++ TF VL AC+R G FD S+V D H
Sbjct: 108 FLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAH 167
Query: 273 ------IDPSVQHYTCMVDLLGHSGRLDEACDL---IMQMRVKPDPGVWGALLNSCKLHG 323
D +V +T ++ G+ EA D+ +++M + PD +L++C G
Sbjct: 168 KVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLG 227
Query: 324 HVKLAELALEKLIELE-PHDAGNYVILSNIYARAANWE 360
+ E + ++E+ + L ++YA+ N E
Sbjct: 228 DLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNME 265
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/545 (41%), Positives = 330/545 (60%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P + T LV +Y+ C + A +FD++P++N+ W +LI YA G +VA+EL
Sbjct: 227 GLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELL 286
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ + + P+ T+ L+ C+ A+E G+++H +I++ + +++V ALI MY KC
Sbjct: 287 EKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKC 346
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ AR++F + RD P + T + +
Sbjct: 347 GGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSAL 406
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
++ + A L +G+ +H + L+V +++ALV MYAKCG + AR +F Q+ E+ VV
Sbjct: 407 TSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVV 466
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W AMITG A HG +AL+ FE+MK + ++PD +TF VLSAC+ GL +EGR F SM
Sbjct: 467 AWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSM 526
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
DY I P V+HY+C VDLLG +G L+EA ++I+ M +P P VWGALL++C++H V+
Sbjct: 527 YLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVER 586
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E A E +++L+P D G YV LSNIYA A +E K+R++M R + K SWIEV
Sbjct: 587 GERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDG 646
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K H F D SHP EIYA+L L ++KE GYVP T V HDV+ ++K +C HSER
Sbjct: 647 KVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDTRFVLHDVDEEQKVQTLCSHSER 706
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAI +GL+ TP GT + I KNL++C DCH A KFISK+ REI RD +R+HHF DG+CS
Sbjct: 707 LAITYGLMKTPPGTPIRIVKNLRVCGDCHTASKFISKVVGREIIARDAHRFHHFVDGVCS 766
Query: 508 CGDYW 512
CGD+W
Sbjct: 767 CGDFW 771
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 193/414 (46%), Gaps = 42/414 (10%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P L L+ +Y+ C L +A ++FD I RN+ W +I A+ A + Y
Sbjct: 126 GIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCY 185
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G PD TF L A + ++ G+++H ++ + E + VG +L+ MYAKC
Sbjct: 186 ETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKC 245
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ A+ +FDK+ E++ P++ T +++
Sbjct: 246 GDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSIL 305
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
AL G+++H + + + + V AL+ MY KCG +K AR LF L + VV
Sbjct: 306 QGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVV 365
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W AM+TGYA G +A+DLF +M+ + ++PD +TF L++CS EG+ + +
Sbjct: 366 TWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQL 425
Query: 268 VR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
V Y +D +Q + +V + G +D+A + QM + + W A++ C HG +
Sbjct: 426 VHAGYSLDVYLQ--SALVSMYAKCGSMDDARLVFNQMSER-NVVAWTAMITGCAQHGRCR 482
Query: 327 LAELALEKLIE--LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
A E++ + ++P +LS EG R + +D GIK +
Sbjct: 483 EALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMV 536
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 185/422 (43%), Gaps = 96/422 (22%)
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL 135
F L+ C+ L ++E+GR +H ++++ + + ++ L+ MYAKC + +AR+VFD I
Sbjct: 99 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIR 158
Query: 136 ERD---------------------------------PSEATLVTVISASADIAALPQGRE 162
+R+ P + T V++++A + L G++
Sbjct: 159 DRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQK 218
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
+H + EL +V T+LV MYAKCG + A+ +F++L EK VV+W +I GYA G
Sbjct: 219 VHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQ 278
Query: 223 STKALDLFEKMKD-EVQPDHITFVGVLSACSR---------------------------- 253
AL+L EKM+ EV P+ IT+ +L C+
Sbjct: 279 VDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNA 338
Query: 254 --------GGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR- 304
GGL + ++F + RD V +T MV G DEA DL +M+
Sbjct: 339 LITMYCKCGGLKEARKLFGDLPHRD------VVTWTAMVTGYAQLGFHDEAIDLFRRMQQ 392
Query: 305 --VKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE-PHDAGNYVILSNIYARAANWEG 361
+KPD + + L SC ++ + ++L+ D L ++YA+ + +
Sbjct: 393 QGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDD 452
Query: 362 VAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGY 421
+ M +R + +W A ++G A H C E L++ E +MK+ G
Sbjct: 453 ARLVFNQMSERNV-----VAWT-------AMITGCAQHGRCRE---ALEYFE-QMKKQGI 496
Query: 422 VP 423
P
Sbjct: 497 KP 498
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/551 (42%), Positives = 336/551 (60%), Gaps = 40/551 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF P LATKL+++Y + A ++FD +R +++WN L RA A G + ++LY
Sbjct: 108 GFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDLY 167
Query: 62 YRLLEIGLVPDNFTFPFALKACS----ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDM 117
++ IG+ D FT+ F LKAC ++S +++G+ IH ++R+ +E ++ V L+D+
Sbjct: 168 VQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDV 227
Query: 118 YAKCSCVVNARQVFDKILERD-----------------------------------PSEA 142
YAK V A VF + ++ P+
Sbjct: 228 YAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSV 287
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T+V V+ A A +AAL QG+ +HG+ R + + V AL+ MY +CG + + + +F+ +
Sbjct: 288 TMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNM 347
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR 261
+ + VVSWN++I+ Y MHG KA+ +FE M + P +I+F+ VL ACS GL +EG+
Sbjct: 348 KNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGK 407
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
+ FESM+ Y I P ++HY CMVDLLG + RLDEA LI M +P P VWG+LL SC++
Sbjct: 408 ILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRI 467
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
H +V+LAE A L ELEP +AGNYV+L++IYA A W + KL+ RG++K CS
Sbjct: 468 HCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSVMKLLEARGLQKLPGCS 527
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMI 441
WIEVK K ++F+S D +P +EI+A L L MK GYVP T V +D++ +EK ++
Sbjct: 528 WIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIV 587
Query: 442 CCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF 501
HSE+LA+AFGLINT G + I KNL++C+DCH KFISK REI VRDVNR+HHF
Sbjct: 588 LGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRFHHF 647
Query: 502 KDGICSCGDYW 512
KDG+CSCGDYW
Sbjct: 648 KDGVCSCGDYW 658
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 140/306 (45%), Gaps = 42/306 (13%)
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
P TF + +C+ +++ +G +H ++ + ++ D F+ LI+MY + + AR+V
Sbjct: 76 PTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKV 135
Query: 131 FDKILERD--------------------------------PSEA-----TLVTVISASAD 153
FD+ ER PS+ L + +
Sbjct: 136 FDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELS 195
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
++ L +G+E+H RH +E N+ V T L+D+YAK G V A ++F + K VSW+AM
Sbjct: 196 VSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAM 255
Query: 214 ITGYAMHGHSTKALDLFEKMKDEVQ---PDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
I +A + KAL+LF+ M E P+ +T V VL AC+ ++G++ ++R
Sbjct: 256 IACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRR 315
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
+D + ++ + G G + + M+ + D W +L++ +HG K A
Sbjct: 316 -GLDSILPVLNALITMYGRCGEILMGQRVFDNMKNR-DVVSWNSLISIYGMHGFGKKAIQ 373
Query: 331 ALEKLI 336
E +I
Sbjct: 374 IFENMI 379
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 113/238 (47%), Gaps = 12/238 (5%)
Query: 136 ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
E +P++ T +I + A +L G ++H F+ + + T L++MY + G + A
Sbjct: 73 EPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRA 132
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRG 254
R +F++ RE+ + WNA+ AM G + LDL+ +M + D T+ VL AC
Sbjct: 133 RKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVS 192
Query: 255 GL----FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPG 310
L +G+ ++R + + ++ T ++D+ G + A + M K +
Sbjct: 193 ELSVSPLQKGKEIHAHILR-HGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTK-NFV 250
Query: 311 VWGALLNSCKLHGHVKLAELALEKLIELEPHDA-GNYVILSNIYARAANWEGVAKLRK 367
W A++ +C + + L L +L+ LE HD+ N V + N+ A G+A L +
Sbjct: 251 SWSAMI-ACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACA---GLAALEQ 304
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 231/538 (42%), Positives = 332/538 (61%), Gaps = 33/538 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+A KL++ Y+ + +A+ LFD + R+ W+V++ +A G + + LL
Sbjct: 36 VIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFRELLRC 95
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ PDN+T PF ++ C + ++ GR IH+ V+++ +D FV A+L+DMYAKC V +A
Sbjct: 96 GVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDA 155
Query: 128 RQVFDKILERD--------------------------------PSEATLVTVISASADIA 155
+++F+++L +D P + +VTV++A A +
Sbjct: 156 QRLFERMLSKDLVTWTVMIGAYADCNAYESLVLFDRMREEGVVPDKVAMVTVVNACAKLG 215
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
A+ + R + + R+ F L+V + TA++DMYAKCG V+ AR +F++++EK V+SW+AMI
Sbjct: 216 AMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIA 275
Query: 216 GYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
Y HG A+DLF M + P+ +TFV +L ACS GL +EG FF SM ++ +
Sbjct: 276 AYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVR 335
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P V+HYTCMVDLLG +GRLDEA LI M V+ D +W ALL +C++H ++LAE A
Sbjct: 336 PDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELAEKAANS 395
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L+EL+P + G+YV+LSNIYA+A WE VAK R +M R +KK +WIEV NK + F
Sbjct: 396 LLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSV 455
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD SHP EIY L L +++ AGYVP T+ V DVE + K M+ HSE+LAIAFGL
Sbjct: 456 GDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVLQDVEEEVKQEMLYTHSEKLAIAFGL 515
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I P+G + I+KNL++C DCH K +S I R I VRD NR+HHF DG CSCGDYW
Sbjct: 516 IAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRRSIIVRDANRFHHFNDGTCSCGDYW 573
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 16/219 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF +L T ++ +Y+ C + +A ++FDR+ ++N+ W+ +I AY ++G + AI+L+
Sbjct: 231 GFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLF 290
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWE-----TDVFVGAALID 116
+ +L ++P+ TF L ACS IEEG R + WE DV ++D
Sbjct: 291 HMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRF----FNSMWEEHAVRPDVKHYTCMVD 346
Query: 117 MYAKCSCVVNARQVFDKI-LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELN 175
+ + + A ++ + + +E+D L + + + I + + E S N
Sbjct: 347 LLGRAGRLDEALRLIEAMTVEKDER---LWSALLGACRIHSKMELAEKAANSLLELQPQN 403
Query: 176 VKVKTALVDMYAKCG-LVKVA--RNLFEQLREKRVVSWN 211
L ++YAK G KVA R++ Q + K++ W
Sbjct: 404 PGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGWT 442
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/524 (43%), Positives = 330/524 (62%), Gaps = 34/524 (6%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L + ++F+ +P+R++ WN +I A NG +E A+ + + L PD+FT L
Sbjct: 186 LGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPI 245
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---- 138
+ + +G+ IH IRN ++ DVF+G++LIDMYAKC+ V ++ +VF + + D
Sbjct: 246 FAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISW 305
Query: 139 -----------------------------PSEATLVTVISASADIAALPQGRELHGFSWR 169
P+ + +++ A A + L G++LHG+ R
Sbjct: 306 NSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIR 365
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
RF+ NV + +ALVDMYAKCG ++ AR +F+++ +VSW AMI GYA+HGH+ A+ L
Sbjct: 366 SRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISL 425
Query: 230 FEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
F++M+ E V+P+++ F+ VL+ACS GL DE +F SM +DY I P ++HY + DLLG
Sbjct: 426 FKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLG 485
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
GRL+EA + I M ++P VW LL +C++H +++LAE +KL ++P + G YV+
Sbjct: 486 RVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVL 545
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAK 408
LSNIY+ A W+ KLR M D+G+KK ACSWIE+KNK HAF++GD SHP D I
Sbjct: 546 LSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEA 605
Query: 409 LKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKN 468
LK L +M+ GYV T V HDVE ++K ++C HSERLAI FG+I+TP GT + +TKN
Sbjct: 606 LKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKN 665
Query: 469 LKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L++C DCH A KFISKI REI VRD +R+HHFKDG CSCGD+W
Sbjct: 666 LRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 709
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 184/397 (46%), Gaps = 67/397 (16%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFL-WNVLIRAYAWNGPYEVAIELYYRLL 65
P L + ++ +YS + LH++ +F+ +P L W +IR Y +G + ++ + ++L
Sbjct: 39 PSLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQML 98
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV- 124
G PD+ FP LK+C+ + + G +H +IR D++ AL++MY+K +
Sbjct: 99 ASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLE 158
Query: 125 -VNA---------------------------RQVFDKILERD------------------ 138
VN R+VF+ + +RD
Sbjct: 159 EVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHE 218
Query: 139 ---------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALV 183
P TL +V+ A+ L +G+E+HG++ R+ ++ +V + ++L+
Sbjct: 219 DALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLI 278
Query: 184 DMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHI 242
DMYAKC V + +F L + +SWN++I G +G + L F++M +++P+H+
Sbjct: 279 DMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHV 338
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
+F ++ AC+ G+ ++R D +V + +VD+ G + A + +
Sbjct: 339 SFSSIMPACAHLTTLHLGKQLHGYIIRS-RFDGNVFIASALVDMYAKCGNIRTARWIFDK 397
Query: 303 MRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
M + D W A++ LHGH A ++L K +E+E
Sbjct: 398 MELY-DMVSWTAMIMGYALHGHAYDA-ISLFKRMEVE 432
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/545 (43%), Positives = 336/545 (61%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + +AT ++ Y C + +A +F + RN+ WN +I YA NG E A +
Sbjct: 273 GFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATF 332
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++L+ G+ P N + AL AC+ L +E GR +H + K DV V +LI MY+KC
Sbjct: 333 LKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKC 392
Query: 122 -------------------------------SCVVNARQVFDKILERD--PSEATLVTVI 148
CV A +F ++ D P TLV+VI
Sbjct: 393 KRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVI 452
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A AD++ Q + +HG + R + NV V TAL+D +AKCG ++ AR LF+ ++E+ V+
Sbjct: 453 TALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVI 512
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WNAMI GY +GH +ALDLF +M++ V+P+ ITF+ V++ACS GL +EG +FESM
Sbjct: 513 TWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESM 572
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+Y ++P++ HY MVDLLG +GRLD+A I M VKP V GA+L +C++H +V+L
Sbjct: 573 KENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVEL 632
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E ++L +L+P D G +V+L+N+YA A+ W+ VA++R M +GI+K+ CS +E++N
Sbjct: 633 GEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRN 692
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ H F SG +HP IYA L+ L MK AGYVP T S+ HDVE D K ++ HSER
Sbjct: 693 EVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTNSI-HDVEEDVKEQLLSSHSER 751
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGL+NT GT + I KNL++C DCH A K+IS +T REI VRD+ R+HHFK+GICS
Sbjct: 752 LAIAFGLLNTRHGTAIHIRKNLRVCGDCHEATKYISLVTGREIIVRDLRRFHHFKNGICS 811
Query: 508 CGDYW 512
CGDYW
Sbjct: 812 CGDYW 816
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 200/411 (48%), Gaps = 48/411 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + TKL+ L+ + + A ++F+ + + L++ +++ YA N A+ Y
Sbjct: 71 GFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFY 130
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+ ++P + F + L+ + GR IH VI N +++++F A++++YAKC
Sbjct: 131 ERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKC 190
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +A ++F+++ +RD P TLV+V+
Sbjct: 191 RQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVL 250
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A AD+ AL GR +HG+++R FE V V TA++D Y KCG V+ AR +F+ + + VV
Sbjct: 251 PAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVV 310
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWN MI GYA +G S +A F KM DE V+P +++ +G L AC+ G + GR + +
Sbjct: 311 SWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGR-YVHRL 369
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ + I V ++ + R+D A + ++ K W A++ +G V
Sbjct: 370 LDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVV-TWNAMILGYAQNGCVN- 427
Query: 328 AELALEKLIELEPHD--AGNYVILSNIYA-------RAANWEGVAKLRKLM 369
AL E++ HD ++ ++S I A R A W +R LM
Sbjct: 428 --EALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLM 476
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 116/223 (52%), Gaps = 17/223 (7%)
Query: 43 VLIRAYAWNGPYEVAIELYYRLLEI----GLVPDNFTFP---FALKACS---ALSAIEEG 92
+ I ++ + P + +EL L E+ L+ N + F K S ++I E
Sbjct: 36 IFIPSHVYRHPSAILLELCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEA 95
Query: 93 RRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL--ERDPSEATLVTVISA 150
R+ E V + + DV ++ YAK S + +A + ++++ E P ++
Sbjct: 96 ARVFEPV---EHKLDVLY-HTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQL 151
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
S + L +GRE+HG + F+ N+ TA+V++YAKC ++ A +FE++ ++ +VSW
Sbjct: 152 SGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSW 211
Query: 211 NAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACS 252
N ++ GYA +G + +A+ + +M++ Q PD IT V VL A +
Sbjct: 212 NTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVA 254
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/551 (42%), Positives = 336/551 (60%), Gaps = 40/551 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF P LATKL+++Y + A ++FD +R +++WN L RA A G + ++LY
Sbjct: 108 GFDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKELLDLY 167
Query: 62 YRLLEIGLVPDNFTFPFALKAC--SALSA--IEEGRRIHEDVIRNKWETDVFVGAALIDM 117
++ IG D FT+ + LKAC S LS + +G+ IH ++R+ +E ++ V L+D+
Sbjct: 168 IQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDV 227
Query: 118 YAKCSCVVNARQVFDKILERD-----------------------------------PSEA 142
YAK V A VF + ++ P+
Sbjct: 228 YAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSV 287
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T+V ++ A A +AAL QG+ +HG+ R + + + V AL+ MY +CG V + + +F+ +
Sbjct: 288 TMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNM 347
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR 261
+++ VVSWN++I+ Y MHG KA+ +FE M + V P +I+F+ VL ACS GL +EG+
Sbjct: 348 KKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGK 407
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
+ FESM+ Y I P ++HY CMVDLLG + RL EA LI M +P P VWG+LL SC++
Sbjct: 408 ILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRI 467
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
H +V+LAE A L ELEP +AGNYV+L++IYA A W + KL+ RG++K CS
Sbjct: 468 HCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEAKSVMKLLEARGLQKLPGCS 527
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMI 441
WIEVK K ++F+S D +P +EI+A L L MK GYVP T V +D++ +EK ++
Sbjct: 528 WIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIV 587
Query: 442 CCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF 501
HSE+LA+AFGLINT G + I KNL++C+DCH KFISK REI VRDVNR+HHF
Sbjct: 588 LGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRFHHF 647
Query: 502 KDGICSCGDYW 512
+DG+CSCGDYW
Sbjct: 648 RDGVCSCGDYW 658
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 137/306 (44%), Gaps = 42/306 (13%)
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
P TF + +C+ +++ G +H ++ + ++ D F+ LI+MY + + A +V
Sbjct: 76 PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKV 135
Query: 131 FDKILERD--------------------------------PSEA-----TLVTVISASAD 153
FD+ ER PS+ L + +
Sbjct: 136 FDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELS 195
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+ L +G+E+H RH +E N+ V T L+D+YAK G V A ++F + K VSW+AM
Sbjct: 196 VCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAM 255
Query: 214 ITGYAMHGHSTKALDLFEKMKDEV---QPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
I +A + KAL+LF+ M E P+ +T V +L AC+ ++G++ ++R
Sbjct: 256 IACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRR 315
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
+D + ++ + G G + + M+ K D W +L++ +HG K A
Sbjct: 316 -QLDSILPVLNALITMYGRCGEVLMGQRVFDNMK-KRDVVSWNSLISIYGMHGFGKKAIQ 373
Query: 331 ALEKLI 336
E +I
Sbjct: 374 IFENMI 379
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 110/238 (46%), Gaps = 12/238 (5%)
Query: 136 ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
E +P++ T +I + A +L G ++H F+ + + T L++MY + G + A
Sbjct: 73 EPNPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRA 132
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRG 254
+F++ RE+ + WNA+ AM GH + LDL+ +M P D T+ VL AC
Sbjct: 133 LKVFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVS 192
Query: 255 GL----FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPG 310
L +G+ ++R + + ++ T ++D+ G + A + M K +
Sbjct: 193 ELSVCPLRKGKEIHAHILR-HGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTK-NFV 250
Query: 311 VWGALLNSCKLHGHVKLAELALEKLIELEP-HDAGNYVILSNIYARAANWEGVAKLRK 367
W A++ +C + + L L +L+ E + N V + N+ A G+A L +
Sbjct: 251 SWSAMI-ACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACA---GLAALEQ 304
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/534 (42%), Positives = 339/534 (63%), Gaps = 35/534 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+++Y D L +A +LFD +P+RN + LI+ YA + + AIEL+ RL ++P+
Sbjct: 79 LLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHR-EVLPN 137
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
FTF L+AC+ + + G +IH VI+ +DVFV AL+D+YAKC + N+ ++F
Sbjct: 138 QFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFA 197
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
+ R+ +E T + + A A +AAL
Sbjct: 198 ESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEP 257
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G ++H + + F+ ++ V AL+DMYAKCG +K AR +F+ + ++ VSWNAMI+GY+M
Sbjct: 258 GLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSM 317
Query: 220 HGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
HG +AL +F+KM++ EV+PD +TFVGVLSAC+ GL D+G+ +F SM++D+ I+P ++
Sbjct: 318 HGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIE 377
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
HYTCMV LLG G LD+A LI ++ +P VW ALL +C +H ++L ++ ++++E+
Sbjct: 378 HYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEM 437
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDAS 398
EP D +V+LSN+YA A W+ VA +RK M +G+KK SWIE + H+F GD S
Sbjct: 438 EPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTS 497
Query: 399 HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTP 458
HP I L+WL + K+AGY+P V DVE++EK ++ HSERLA++FG+I TP
Sbjct: 498 HPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTP 557
Query: 459 DGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
G+ + I KNL+IC DCH AIK ISK+ +REI VRD+NR+HHF++G+CSCGDYW
Sbjct: 558 SGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 611
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 51/95 (53%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+ L+ +Y+ C + +A +FD + +++ WN +I Y+ +G A+ ++ ++ E
Sbjct: 275 VVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQET 334
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN 102
+ PD TF L AC+ +++G+ +I++
Sbjct: 335 EVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQD 369
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/522 (41%), Positives = 328/522 (62%), Gaps = 34/522 (6%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+ ++F+ +P+++L WN +I A NG YE + + + L PD+FT L +
Sbjct: 191 SVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIA 250
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------ 138
I G+ IH IR + D++V ++LIDMYAKC+ V ++ +VF + ERD
Sbjct: 251 ENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNS 310
Query: 139 ---------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHR 171
P + +++ A A + L G++LHG+ R+
Sbjct: 311 IIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNG 370
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
F+ N+ + ++LVDMYAKCG ++ A+ +F+++R + +VSW AMI G A+HG + A++LFE
Sbjct: 371 FDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFE 430
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+M+ E ++P+H+ F+ VL+ACS GGL DE +F SM RD+ I P V+HY + DLLG +
Sbjct: 431 QMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRA 490
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
GRL+EA D I M + P +W LL++C++H ++ +AE +++E++P++ G Y++L+
Sbjct: 491 GRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLA 550
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
NIY+ A W+ AK R M GI+K+ ACSWIEVKNK +AF++GD SHP ++I ++
Sbjct: 551 NIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAME 610
Query: 411 WLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLK 470
L M++ GYVP T V HDVE ++K ++C HSERLAI FG+INTP G + +TKNL+
Sbjct: 611 VLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLR 670
Query: 471 ICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+C DCH A KFISKI REI VRD +R+HHFK+G CSCGDYW
Sbjct: 671 VCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 712
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 136/316 (43%), Gaps = 53/316 (16%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFT 75
+YS + LH++ +LF+ I W +IR Y +G ++ + +L GL PD+
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV-------VNAR 128
FP LK+C+ L + G +H +IR + D++ G AL++MY+K + + A
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 129 QVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
+VFD++ ER S T V+V+S +
Sbjct: 169 EVFDEMTERTRSVRT-VSVLSEDS------------------------------------ 191
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGV 247
R +FE + EK +VSWN +I G A +G + L + +M ++PD T V
Sbjct: 192 ------VRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSV 245
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
L + G+ +R +D + + ++D+ R+ ++C + + +
Sbjct: 246 LPLIAENVDISRGKEIHGCSIRQ-GLDADIYVASSLIDMYAKCTRVADSCR-VFTLLTER 303
Query: 308 DPGVWGALLNSCKLHG 323
D W +++ C +G
Sbjct: 304 DGISWNSIIAGCVQNG 319
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + +A+ LV +Y+ C + A Q+FDR+ R++ W +I A +G AIEL+
Sbjct: 370 GFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELF 429
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN 102
++ G+ P++ F L ACS ++E + + R+
Sbjct: 430 EQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRD 470
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/552 (42%), Positives = 336/552 (60%), Gaps = 43/552 (7%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F P L+T+L+ Y+A L A Q+FD P +N+F+WN +++A A E A+
Sbjct: 280 FRSDPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLA 339
Query: 63 RLLEIGLVPDNFTFPFALKAC-----SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDM 117
+ +G+ D++++ LKAC S L A R +H IR + V LID
Sbjct: 340 DMGRLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDC 399
Query: 118 YAKCSCVVNARQVFDKILERD-----------------------------------PSEA 142
YAK V A +VF + +R+ P+
Sbjct: 400 YAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSI 459
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T+V+V+ A A + AL QG+ LH + R F+L V V AL+ MY KCG ++ R +F +
Sbjct: 460 TIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWI 519
Query: 203 -REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEG 260
R + VVSWN++I+GY MHG ++L +FE+M +E + P+ ITFV VL ACS GL ++G
Sbjct: 520 GRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQG 579
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
+ FESMV +Y++ P +HY CMVDLLG +GRLDEA +LI MR++P P VWG+LL +C+
Sbjct: 580 KKLFESMV-EYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLGACR 638
Query: 321 LHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIAC 380
+HGHV+ AE+A L +LEP +AGNYV+L++IYARA V L++L+ + ++K C
Sbjct: 639 IHGHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAKLQNQVDVLKELLEEHALEKVPGC 698
Query: 381 SWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANM 440
SWIEVK K ++F+S D +P +E+ A + +MK GYVP T SV +D+E +EK +
Sbjct: 699 SWIEVKKKLYSFVSVDNKNPQVEELQALIGEFVTQMKNEGYVPDTRSVLYDIEEEEKERI 758
Query: 441 ICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHH 500
+ HSE+LA+AFGLI T G + ITKNL++C+DCH KFISK T+REI VRDVNR+HH
Sbjct: 759 LLGHSEKLAVAFGLIKTGSGEAIRITKNLRLCEDCHSVTKFISKFTDREIVVRDVNRFHH 818
Query: 501 FKDGICSCGDYW 512
F++G+CSC DYW
Sbjct: 819 FRNGVCSCRDYW 830
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/522 (41%), Positives = 328/522 (62%), Gaps = 34/522 (6%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+ ++F+ +P+++L WN +I A NG Y + + + L PD+FT L +
Sbjct: 252 SVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIA 311
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------ 138
I +G+ IH IR + +V+V ++LIDMYAKC+ VV++ +VF + ERD
Sbjct: 312 ENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNS 371
Query: 139 ---------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHR 171
P + +++ A A + L G++LHG+ R+
Sbjct: 372 IIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNG 431
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
F+ N+ + ++LVDMYAKCG ++ AR +F+++R + +VSW AMI G A+HGH+ A++LFE
Sbjct: 432 FDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFE 491
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+MK E ++P+++ F+ VL+ACS GL DE +F SM D+ I P V+HY + DLLG +
Sbjct: 492 QMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRA 551
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
GRL+EA D I M + P VW LL++C++H +V +AE +++E++P + G Y++L+
Sbjct: 552 GRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLA 611
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
NIY+ A W+ AK R + GI+K+ ACSWIEV+NK +AF++GD SHP ++I ++
Sbjct: 612 NIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAME 671
Query: 411 WLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLK 470
L M++ GYVP T V HDVE ++K ++C HSERLAI FG+INTP GT + +TKNL+
Sbjct: 672 VLMELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNLR 731
Query: 471 ICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+C DCH A KFISKI REI VRD +R+HHFK+G CSCGDYW
Sbjct: 732 VCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 773
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 152/341 (44%), Gaps = 44/341 (12%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFT 75
+YS + LH++ +LF+ + W +IR Y +G ++ + +L GL PD+
Sbjct: 51 IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV-------VNAR 128
FP LKAC+ L + G +H +IR + D++ G AL++MY+K + + A
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGAS 170
Query: 129 QVFDKILERDPSEATLVTVISASADIAALPQGREL-------HGFSWRHR------FELN 175
QV D++ ER S T A + QGR++ + S R R E++
Sbjct: 171 QVLDEMTERTRSVRT--------ASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEID 222
Query: 176 VKVKTALVDMYAKCGL------------VKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
K ++ +M A C L V R +FE + EK +VSWN +I G A +G
Sbjct: 223 YKPRSEYREMEA-CNLGQQIKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLY 281
Query: 224 TKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTC 282
+ L + +M ++PD T VL + +G+ +R +D V +
Sbjct: 282 GETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQ-GLDAEVYVASS 340
Query: 283 MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
++D+ R+ ++ + + + D W +++ C +G
Sbjct: 341 LIDMYAKCTRVVDSYR-VFTLLTERDGISWNSIIAGCVQNG 380
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + +A+ LV +Y+ C + A Q+FDR+ R++ W +I A +G AIEL+
Sbjct: 431 GFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELF 490
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
++ G+ P+ F L ACS ++E
Sbjct: 491 EQMKTEGIEPNYVAFMAVLTACSHAGLVDEA 521
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/538 (44%), Positives = 332/538 (61%), Gaps = 35/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+AT ++ Y C + A +FD +P +N WN +I YA NG A+ L+ R++E G
Sbjct: 198 VATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEG 257
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ + + AL+AC L ++EG R+HE ++R +++V V ALI MY+KC V A
Sbjct: 258 VDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLAS 317
Query: 129 QVFDKILER---------------------------------DPSEATLVTVISASADIA 155
VFD++ R P TLV+VI A ADI+
Sbjct: 318 HVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADIS 377
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
Q R +HG+S R + +V V TAL+DMYAKCG V +AR LF RE+ V++WNAMI
Sbjct: 378 DPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIH 437
Query: 216 GYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GY HG A++LFE+MK + P+ TF+ VLSACS GL DEGR +F SM DY ++
Sbjct: 438 GYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLE 497
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY MVDLLG +G+LDEA I +M + P V+GA+L +CKLH +V+LAE + +K
Sbjct: 498 PGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQK 557
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
+ EL P + +V+L+NIYA A+ W+ VA++R M G++K+ S I++KN+ H F S
Sbjct: 558 IFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYS 617
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
G +H EIY++L L +K GYVP T+S+ HDVE+D KA ++ HSE+LAIAFGL
Sbjct: 618 GSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGL 676
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I T GT + I KNL++C+DCH A K IS +T REI +RD+ R+HHFKDG CSCGDYW
Sbjct: 677 IRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 182/386 (47%), Gaps = 39/386 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + AT L ++Y+ C +A ++FDR+P R+ WN L+ YA NG +A+E+
Sbjct: 89 GIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMV 148
Query: 62 YRLL-EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
R+ E G PD+ T L AC+ A+ R H IR+ E V V A++D Y K
Sbjct: 149 VRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCK 208
Query: 121 CSCVVNARQVFD-------------------------------KILER--DPSEATLVTV 147
C + AR VFD +++E D ++ +++
Sbjct: 209 CGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAA 268
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A ++ L +G +H R + NV V AL+ MY+KC V +A ++F++L +
Sbjct: 269 LQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQ 328
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSWNAMI G A +G S A+ LF +M+ + V+PD T V V+ A + + R
Sbjct: 329 VSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGY 388
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+R H+D V T ++D+ GR++ A L R + W A+++ HG K
Sbjct: 389 SIR-LHLDQDVYVLTALIDMYAKCGRVNIARILFNSARER-HVITWNAMIHGYGSHGFGK 446
Query: 327 LAELALEKL--IELEPHDAGNYVILS 350
A E++ I + P++ +LS
Sbjct: 447 AAVELFEEMKSIGIVPNETTFLSVLS 472
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 159/347 (45%), Gaps = 38/347 (10%)
Query: 45 IRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW 104
+RA A A+ + + G P TF LK C+A + GR +H +
Sbjct: 31 LRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGI 90
Query: 105 ETDVFVGAALIDMYAKCSCVVNARQVFDKILERD-------------------------- 138
+++ AL +MYAKC +AR+VFD++ RD
Sbjct: 91 DSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVR 150
Query: 139 --------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCG 190
P TLV+V+ A A+ AL RE H F+ R E V V TA++D Y KCG
Sbjct: 151 MQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCG 210
Query: 191 LVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLS 249
++ AR +F+ + K VSWNAMI GYA +G S +AL LF +M +E V ++ + L
Sbjct: 211 DIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQ 270
Query: 250 ACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
AC G DEG E +VR +D +V ++ + R+D A + ++ +
Sbjct: 271 ACGELGCLDEGMRVHELLVR-IGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQV 329
Query: 310 GVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARA 356
W A++ C +G + A + L ++LE ++ ++S I A A
Sbjct: 330 S-WNAMILGCAQNGCSEDA-VRLFTRMQLENVKPDSFTLVSVIPALA 374
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/538 (44%), Positives = 332/538 (61%), Gaps = 35/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+AT ++ Y C + A +FD +P +N WN +I YA NG A+ L+ R++E G
Sbjct: 198 VATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEG 257
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ + + AL+AC L ++EG R+HE ++R +++V V ALI MY+KC V A
Sbjct: 258 VDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLAS 317
Query: 129 QVFDKILER---------------------------------DPSEATLVTVISASADIA 155
VFD++ R P TLV+VI A ADI+
Sbjct: 318 HVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADIS 377
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
Q R +HG+S R + +V V TAL+DMYAKCG V +AR LF RE+ V++WNAMI
Sbjct: 378 DPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIH 437
Query: 216 GYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GY HG A++LFE+MK + P+ TF+ VLSACS GL DEGR +F SM DY ++
Sbjct: 438 GYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLE 497
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY MVDLLG +G+LDEA I +M + P V+GA+L +CKLH +V+LAE + +K
Sbjct: 498 PGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQK 557
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
+ EL P + +V+L+NIYA A+ W+ VA++R M G++K+ S I++KN+ H F S
Sbjct: 558 IFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYS 617
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
G +H EIY++L L +K GYVP T+S+ HDVE+D KA ++ HSE+LAIAFGL
Sbjct: 618 GSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGL 676
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I T GT + I KNL++C+DCH A K IS +T REI +RD+ R+HHFKDG CSCGDYW
Sbjct: 677 IRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 182/386 (47%), Gaps = 39/386 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + AT L ++Y+ C +A ++FDR+P R+ WN L+ YA NG +A+E+
Sbjct: 89 GIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMV 148
Query: 62 YRLL-EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
R+ E G PD+ T L AC+ A+ R H IR+ E V V A++D Y K
Sbjct: 149 VRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCK 208
Query: 121 CSCVVNARQVFD-------------------------------KILER--DPSEATLVTV 147
C + AR VFD +++E D ++ +++
Sbjct: 209 CGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAA 268
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A ++ L +G +H R + NV V AL+ MY+KC V +A ++F++L +
Sbjct: 269 LQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQ 328
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSWNAMI G A +G S A+ LF +M+ + V+PD T V V+ A + + R
Sbjct: 329 VSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGY 388
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+R H+D V T ++D+ GR++ A L R + W A+++ HG K
Sbjct: 389 SIR-LHLDQDVYVLTALIDMYAKCGRVNIARILFNSARER-HVITWNAMIHGYGSHGFGK 446
Query: 327 LAELALEKL--IELEPHDAGNYVILS 350
A E++ I + P++ +LS
Sbjct: 447 AAVELFEEMKSIGIVPNETTFLSVLS 472
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 155/335 (46%), Gaps = 38/335 (11%)
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
A+ + + G P TF LK C+A + GR +H + +++ AL +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 117 MYAKCSCVVNARQVFDKILERD----------------------------------PSEA 142
MYAKC +AR+VFD++ RD P
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
TLV+V+ A A+ AL RE H F+ R E V V TA++D Y KCG ++ AR +F+ +
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR 261
K VSWNAMI GYA +G S +AL LF +M +E V ++ + L AC G DEG
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
E +VR +D +V ++ + R+D A + ++ + W A++ C
Sbjct: 283 RVHELLVR-IGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVS-WNAMILGCAQ 340
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARA 356
+G + A + L ++LE ++ ++S I A A
Sbjct: 341 NGCSEDA-VRLFTRMQLENVKPDSFTLVSVIPALA 374
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/545 (42%), Positives = 339/545 (62%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF ++T LV +YS C + A +FDR+ + + WN +I Y NG A+E++
Sbjct: 306 GFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIF 365
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++++ + N T AL AC+ L +E+GR +H+ + + + +DV V +LI MY+KC
Sbjct: 366 QKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKC 425
Query: 122 SCVVNARQVFDKILER---------------------------------DPSEATLVTVI 148
V A ++F+ + + P T+V+VI
Sbjct: 426 KRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVI 485
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A A+++ LPQ + +HG R + NV V TALVDMYAKCG V AR LF+ + E+ V
Sbjct: 486 PALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVT 545
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEV-QPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WNAMI GY HG AL+LFEKMK EV +P+ +TF+ VLSACS GL +EG +F SM
Sbjct: 546 TWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSM 605
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+DY ++P++ HY MVDLLG + RL+EA D I +M ++P V+GA+L +C++H +V+L
Sbjct: 606 KKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVEL 665
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E A ++ +L+P D G +V+L+NIYA A+ W+ VA++R M +GI+K+ S +E++N
Sbjct: 666 GEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQN 725
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ H F SG SHP +IYA L+ L R+K AGY+P T SV HDVE+ K ++ HSE+
Sbjct: 726 EVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGYMPDTNSV-HDVEDVVKEQLLNSHSEK 784
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAF L+NT GT + + KNL++C DCH A K+IS +T+REI VRD+ R+HHFKDG CS
Sbjct: 785 LAIAFSLLNTSPGTTIHLRKNLRVCGDCHNATKYISLVTKREIIVRDMRRFHHFKDGTCS 844
Query: 508 CGDYW 512
CGDYW
Sbjct: 845 CGDYW 849
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/413 (30%), Positives = 202/413 (48%), Gaps = 38/413 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + T +V++Y+ C + A+++FDR+P+R+L WN +I YA NG + A+EL
Sbjct: 205 GFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELV 264
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+ E G PD+ T L A + + ++ GR IH +R +E+ V V AL+DMY+KC
Sbjct: 265 LRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKC 324
Query: 122 SCVVNARQVFDKILER----------------DPS--------------EATLVTVIS-- 149
V AR +FD++ + DP E T VTV+
Sbjct: 325 GSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGAL 384
Query: 150 -ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A AD+ + QGR +H + +V V +L+ MY+KC V +A +FE L+ K +V
Sbjct: 385 HACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLV 444
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNAMI GYA +G +A+D F KM+ ++PD T V V+ A + + + + +
Sbjct: 445 SWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLV 504
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+R +D +V T +VD+ G + A L M + W A+++ HG K
Sbjct: 505 IRTC-LDKNVFVATALVDMYAKCGAVHTARKLFDMMDER-HVTTWNAMIDGYGTHGLGKA 562
Query: 328 AELALEKLIE--LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
A EK+ + ++P++ +LS EG + D G++ ++
Sbjct: 563 ALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAM 615
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 181/355 (50%), Gaps = 36/355 (10%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+ TKLV L+ LH A ++F I + L++ +++ YA N + A+ + R+
Sbjct: 110 LFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYD 169
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ P + F + LK C + + +G+ IH +I N + ++VF +++MYAKC V A
Sbjct: 170 GVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEA 229
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
++FD++ ERD P T+V+++ A AD+
Sbjct: 230 YKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADV 289
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
+L GR +HG+S R FE V V TALVDMY+KCG V AR +F+++ K VVSWN+MI
Sbjct: 290 GSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMI 349
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
GY +G A+++F+KM DE V+ ++T +G L AC+ G ++GR F ++ +
Sbjct: 350 DGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGR-FVHKLLDQLEL 408
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
V ++ + R+D A ++ ++ K W A++ +G + A
Sbjct: 409 GSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVS-WNAMILGYAQNGRINEA 462
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/543 (40%), Positives = 339/543 (62%), Gaps = 37/543 (6%)
Query: 7 PV-LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
PV L T+L+ LY+ C CL +A ++ D +P+RN+ W +I Y+ G A+ L+ +L
Sbjct: 44 PVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEML 103
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G P+ FTF L +C++ S + GR+IH VI+ +E+ +FVG++L+DMYAK +
Sbjct: 104 MSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKIC 163
Query: 126 NARQVFDKILERD---------------------------------PSEATLVTVISASA 152
AR+VFD + ERD + T +V++A +
Sbjct: 164 EARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALS 223
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+AAL GR++H R + V ++ +L+DMY+KCG + +R +F+ + E+ V+SWNA
Sbjct: 224 GLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNA 283
Query: 213 MITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEG-RMFFESMVR 269
M+ GY+ HG +A++LF+ MK+E V+PD +TF+ VLS CS GG+ D G +F+E + +
Sbjct: 284 MLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQ 343
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+P ++HY C+VDL G +GR++EA + I +M +P +WG+LL +C++H +V + E
Sbjct: 344 KDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGE 403
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
+L+E+E +AGNYVILSN+YA A W+ V +R+LM ++ + K SWIE+
Sbjct: 404 FVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTL 463
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLA 449
H F + D SHP +E++AK++ L ++KEAGYVP V +DV++++K ++ HSE+LA
Sbjct: 464 HTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLA 523
Query: 450 IAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
+AFGLI TP GT + I KNL+IC DCH KF+S++ RE+++RD NR+HH G CSCG
Sbjct: 524 LAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCG 583
Query: 510 DYW 512
DYW
Sbjct: 584 DYW 586
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 162/364 (44%), Gaps = 77/364 (21%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
L C + +AI EG+R+H +I+ +E V++ LI +Y KC C+ +AR+V D++ ER+
Sbjct: 17 LTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNV 76
Query: 139 --------------------------------PSEATLVTVISASADIAALPQGRELHGF 166
P+E T TV+++ + GR++H
Sbjct: 77 VSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSL 136
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ FE ++ V ++L+DMYAK G + AR +F+ L E+ VVS A+I+GYA G +A
Sbjct: 137 VIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEA 196
Query: 227 LDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR---------------- 269
LDLF +++ E ++ +++T+ VL+A S D GR ++R
Sbjct: 197 LDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDM 256
Query: 270 --------------DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM----RVKPDPGV 311
D + +V + M+ G EA +L M +VKPD
Sbjct: 257 YSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVT 316
Query: 312 WGALLNSCKLHGHVKLAELALEKLIELEPHDAG------NYVILSNIYARAANWEGVAKL 365
+ A+L+ C H + + LE E+ G +Y + +++ RA E +
Sbjct: 317 FLAVLSGCS---HGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEF 373
Query: 366 RKLM 369
K M
Sbjct: 374 IKKM 377
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 84/152 (55%), Gaps = 2/152 (1%)
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+V++ A+ +G+ +H + +E V ++T L+ +Y KC + AR + +++ E+
Sbjct: 15 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 74
Query: 206 RVVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
VVSW AMI+GY+ G++++AL LF E + P+ TF VL++C+ F GR
Sbjct: 75 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ-I 133
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
S+V + + + ++D+ +G++ EA
Sbjct: 134 HSLVIKTSFESHIFVGSSLLDMYAKAGKICEA 165
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/538 (41%), Positives = 330/538 (61%), Gaps = 34/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+AT L+ +Y C + A ++FD++ R++ W V+IR YA N E A L+ + E G
Sbjct: 300 VATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEG 359
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD T+ + AC++ + + R IH V+R + TD+ V AL+ MYAKC + +AR
Sbjct: 360 IQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDAR 419
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
QVFD + RD P T + +++A +
Sbjct: 420 QVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLG 479
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL G E++ + + ++ V AL++M K G ++ AR +FE + ++ VV+WN MI
Sbjct: 480 ALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIG 539
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GY++HG++ +ALDLF++M K+ +P+ +TFVGVLSACSR G +EGR FF ++ I
Sbjct: 540 GYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIV 599
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P+++ Y CMVDLLG +G LDEA LI +M +KP+ +W LL +C+++G++ +AE A E+
Sbjct: 600 PTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAER 659
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
+ EP+D YV LS++YA A WE VAK+RK+M RG++K C+WIEV+ K H F+
Sbjct: 660 CLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVV 719
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
D SHP EIYA+L L +K GY+P T++V H+V EK I HSE+LAIA+G+
Sbjct: 720 EDRSHPQAGEIYAELARLMTAIKREGYIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGV 779
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++ P G + I KNL++C DCH A KFISK+T REI RD +R+HHFK+G+CSCGDYW
Sbjct: 780 LSLPSGAPIRIFKNLRVCGDCHSASKFISKVTGREIIARDASRFHHFKNGVCSCGDYW 837
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 189/410 (46%), Gaps = 38/410 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + T LV +Y + A Q+FD + +R++ +NV+I YA +G E A +L
Sbjct: 191 VGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQL 250
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+YR+ + G P+ +F L CS A+ G+ +H + DV V ALI MY
Sbjct: 251 FYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMG 310
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + AR+VFDK+ RD P T + +
Sbjct: 311 CGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHI 370
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
I+A A A L RE+H R F ++ V TALV MYAKCG +K AR +F+ + + V
Sbjct: 371 INACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDV 430
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSW+AMI Y +G +A + F MK + V+PD +T++ +L+AC G D G +
Sbjct: 431 VSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQ 490
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
++ + + ++++ G ++ A I + V+ D W ++ LHG+ +
Sbjct: 491 AIKA-DLVSHIPVGNALINMNVKHGSIERA-RYIFENMVQRDVVTWNVMIGGYSLHGNAR 548
Query: 327 LAELALEKLIE--LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
A +++++ P+ +LS EG L+ RGI
Sbjct: 549 EALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGI 598
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 185/406 (45%), Gaps = 70/406 (17%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ L+S C + A Q FD + + + WN +I YA G + A L+ ++++ + P
Sbjct: 102 LIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPS 161
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
TF L ACS+ + ++ G+ H VI+ + +D +G AL+ MY K + ARQVFD
Sbjct: 162 IITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFD 221
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
+ +RD P+ + ++++ + AL
Sbjct: 222 GLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAW 281
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G+ +H +V+V TAL+ MY CG ++ AR +F++++ + VVSW MI GYA
Sbjct: 282 GKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAE 341
Query: 220 HGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-----DYHI 273
+ + A LF M++E +QPD IT++ +++AC+ R +VR D +
Sbjct: 342 NSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLV 401
Query: 274 DPSVQH-------------------------YTCMVDLLGHSGRLDEACD---LIMQMRV 305
D ++ H ++ M+ +G +EA + L+ + V
Sbjct: 402 DTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNV 461
Query: 306 KPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSN 351
+PD + LLN+C GH+ +L +E + D +++ + N
Sbjct: 462 EPDVVTYINLLNAC---GHLGALDLGMEIYTQAIKADLVSHIPVGN 504
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 147/340 (43%), Gaps = 69/340 (20%)
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
A ++ +RL E D+ T+ + C L G+++ + +I++ + +++ LI
Sbjct: 45 ANDVLHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIK 104
Query: 117 MYAKCSCVVNARQVFDKILER---------------------------------DPSEAT 143
+++ C ++ ARQ FD + + +PS T
Sbjct: 105 LHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIIT 164
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
+ V+ A + A L G+E H + F + ++ TALV MY K G + AR +F+ L
Sbjct: 165 FLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLY 224
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACS---------- 252
++ V ++N MI GYA G KA LF +M+ E +P+ I+F+ +L CS
Sbjct: 225 KRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKA 284
Query: 253 ------RGGLFDEGRMFFESMVRDYHIDPSVQ---------------HYTCMVDLLGHSG 291
GL D+ R+ +++R Y S++ +T M+ +
Sbjct: 285 VHAQCMNTGLVDDVRV-ATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENS 343
Query: 292 RLDEACDLIMQMR---VKPDPGVWGALLNSCKLHGHVKLA 328
+++A L M+ ++PD + ++N+C + LA
Sbjct: 344 NIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLA 383
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/543 (40%), Positives = 339/543 (62%), Gaps = 37/543 (6%)
Query: 7 PV-LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
PV L T+L+ LY+ C CL +A ++ D +P+RN+ W +I Y+ G A+ L+ +L
Sbjct: 511 PVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEML 570
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G P+ FTF L +C++ S + GR+IH VI+ +E+ +FVG++L+DMYAK +
Sbjct: 571 MSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKIC 630
Query: 126 NARQVFDKILERD---------------------------------PSEATLVTVISASA 152
AR+VFD + ERD + T +V++A +
Sbjct: 631 EARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALS 690
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+AAL GR++H R + V ++ +L+DMY+KCG + +R +F+ + E+ V+SWNA
Sbjct: 691 GLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNA 750
Query: 213 MITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEG-RMFFESMVR 269
M+ GY+ HG +A++LF+ MK+E V+PD +TF+ VLS CS GG+ D G +F+E + +
Sbjct: 751 MLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQ 810
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+P ++HY C+VDL G +GR++EA + I +M +P +WG+LL +C++H +V + E
Sbjct: 811 KDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGE 870
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
+L+E+E +AGNYVILSN+YA A W+ V +R+LM ++ + K SWIE+
Sbjct: 871 FVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTL 930
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLA 449
H F + D SHP +E++AK++ L ++KEAGYVP V +DV++++K ++ HSE+LA
Sbjct: 931 HTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLA 990
Query: 450 IAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
+AFGLI TP GT + I KNL+IC DCH KF+S++ RE+++RD NR+HH G CSCG
Sbjct: 991 LAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCG 1050
Query: 510 DYW 512
DYW
Sbjct: 1051 DYW 1053
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 178/408 (43%), Gaps = 84/408 (20%)
Query: 43 VLIRAYAWNGPYEVAI----ELYYRLLEIGLVPDNFTFP---FALKACSALSAIEEGRRI 95
+L+ + N P + +L LLE+G+ F L C + +AI EG+R+
Sbjct: 440 ILLSTFPANSPDLKTLCSNRQLKEALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRV 499
Query: 96 HEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----------------- 138
H +I+ +E V++ LI +Y KC C+ +AR+V D++ ER+
Sbjct: 500 HAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYA 559
Query: 139 ----------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
P+E T TV+++ + GR++H + FE ++ V ++L
Sbjct: 560 SEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSL 619
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDH 241
+DMYAK G + AR +F+ L E+ VVS A+I+GYA G +ALDLF +++ E ++ ++
Sbjct: 620 LDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNY 679
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVR------------------------------DY 271
+T+ VL+A S D GR ++R D
Sbjct: 680 VTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDS 739
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM----RVKPDPGVWGALLNSCKLHGHVKL 327
+ +V + M+ G EA +L M +VKPD + A+L+ C H +
Sbjct: 740 MPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCS---HGGM 796
Query: 328 AELALEKLIELEPHDAG------NYVILSNIYARAANWEGVAKLRKLM 369
+ LE E+ G +Y + +++ RA E + K M
Sbjct: 797 EDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKM 844
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/539 (42%), Positives = 321/539 (59%), Gaps = 37/539 (6%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNG-PYEVAIELYYRLLEIG 68
T LV +Y+ C A F+R+ R++ WN LI YA G PY AI+++Y+L
Sbjct: 468 GTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYN-AIDMFYKLRLSA 526
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD T + AC+ L+ +++G IH +++ +E+D V ALIDMYAKC + +A
Sbjct: 527 INPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAE 586
Query: 129 QVFDKI-LERD---------------------------------PSEATLVTVISASADI 154
+F+K +D P+ T V+V+ A+A +
Sbjct: 587 FLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYL 646
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
AA +G H + F N V +L+DMYAKCG + + LF ++ K VSWNAM+
Sbjct: 647 AAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAML 706
Query: 215 TGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+GYA+HGH +A+ LF M++ +VQ D ++FV VLSAC GL +EGR F SM YHI
Sbjct: 707 SGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHI 766
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P ++HY CMVDLLG +G DE I M V+PD GVWGALL SC++H +VKL E+AL+
Sbjct: 767 KPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALD 826
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
L++LEP + ++V+LS+IYA++ W K R M D G+KK+ CSW+E+KNK HAF
Sbjct: 827 HLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFR 886
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD SHP + ++ L +M++ GYVP V +VE ++K + HSERLAI F
Sbjct: 887 VGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFA 946
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+NTP G+ + I KNL++C DCH KFISKIT R I VRD R+HHF+DGICSC DYW
Sbjct: 947 LLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 191/392 (48%), Gaps = 43/392 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF H + T L++LYS A +FD P + LWN +IRAY + Y A+E+Y
Sbjct: 59 GFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMY 117
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
Y ++E GL PD +TF F LKAC+ ++EG H ++ R E DVF+GA L+DMY+K
Sbjct: 118 YCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKM 177
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ AR+VFDK+ +RD PS +L+ +
Sbjct: 178 GDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLF 237
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
++ + R +HG+ +R F + V L+D+Y+KCG V VAR +F+Q+ ++ V
Sbjct: 238 PGICKLSNIELCRSIHGYVFRRDF--SSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDV 295
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SW M+ GYA +G + L+LF+KMK V+ + ++ V A + ++G+
Sbjct: 296 SWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCA 355
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
++ ID + T ++ + G ++A L ++ + D W A++ + G+
Sbjct: 356 LQQ-RIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGR-DLVAWSAIIAALVQTGY--- 410
Query: 328 AELALEKLIELEPHDAG-NYVILSNIYARAAN 358
E AL E++ N V L +I A+
Sbjct: 411 PEEALSLFQEMQNQKMKPNRVTLMSILPACAD 442
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 182/396 (45%), Gaps = 39/396 (9%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
F ++ L+ LYS C + A ++FD++ ++ W ++ YA NG + +EL+ ++
Sbjct: 261 FSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKM 320
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
+ + + A A + +E+G+ IH ++ + ++D+ V L+ MYAKC
Sbjct: 321 KLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGET 380
Query: 125 VNARQVFDKILERD---------------------------------PSEATLVTVISAS 151
A+Q+F + RD P+ TL++++ A
Sbjct: 381 EKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPAC 440
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
AD++ L G+ +H F+ + + ++ TALV MYAKCG A F ++ + +V+WN
Sbjct: 441 ADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWN 500
Query: 212 AMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR- 269
++I GYA G A+D+F K++ + PD T VGV+ AC+ D+G +V+
Sbjct: 501 SLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKL 560
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK--L 327
+ D V++ ++D+ G L A L + D W ++ + +GH K +
Sbjct: 561 GFESDCHVKN--ALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAI 618
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVA 363
+ +L P+ +L AA EG+A
Sbjct: 619 SSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMA 654
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 167/343 (48%), Gaps = 38/343 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ LV +YS L A ++FD++P+R++ WN +I + + A++ + + +G
Sbjct: 166 IGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVG 225
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P + + LS IE R IH V R + + V G LID+Y+KC V AR
Sbjct: 226 VEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNG--LIDLYSKCGDVDVAR 283
Query: 129 QVFDKILERDP---------------------------------SEATLVTVISASADIA 155
+VFD+++++D ++ + V+ A+A+
Sbjct: 284 RVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETI 343
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L +G+E+HG + + R + ++ V T L+ MYAKCG + A+ LF L+ + +V+W+A+I
Sbjct: 344 DLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIA 403
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+ +AL LF++M+++ ++P+ +T + +L AC+ L G+ V+ +D
Sbjct: 404 ALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVK-ADMD 462
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
+ T +V + G A +M + D W +L+N
Sbjct: 463 SDLSTGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTWNSLIN 504
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/539 (42%), Positives = 321/539 (59%), Gaps = 37/539 (6%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNG-PYEVAIELYYRLLEIG 68
T LV +Y+ C A F+R+ R++ WN LI YA G PY AI+++Y+L
Sbjct: 468 GTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYN-AIDMFYKLRLSA 526
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD T + AC+ L+ +++G IH +++ +E+D V ALIDMYAKC + +A
Sbjct: 527 INPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAE 586
Query: 129 QVFDKI-LERD---------------------------------PSEATLVTVISASADI 154
+F+K +D P+ T V+V+ A+A +
Sbjct: 587 FLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYL 646
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
AA +G H + F N V +L+DMYAKCG + + LF ++ K VSWNAM+
Sbjct: 647 AAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAML 706
Query: 215 TGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+GYA+HGH +A+ LF M++ +VQ D ++FV VLSAC GL +EGR F SM YHI
Sbjct: 707 SGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHI 766
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P ++HY CMVDLLG +G DE I M V+PD GVWGALL SC++H +VKL E+AL+
Sbjct: 767 KPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALD 826
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
L++LEP + ++V+LS+IYA++ W K R M D G+KK+ CSW+E+KNK HAF
Sbjct: 827 HLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFR 886
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD SHP + ++ L +M++ GYVP V +VE ++K + HSERLAI F
Sbjct: 887 VGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFA 946
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+NTP G+ + I KNL++C DCH KFISKIT R I VRD R+HHF+DGICSC DYW
Sbjct: 947 LLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 191/392 (48%), Gaps = 43/392 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF H + T L++LYS A +FD P + LWN +IRAY + Y A+E+Y
Sbjct: 59 GFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMY 117
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
Y ++E GL PD +TF F LKAC+ ++EG H ++ R E DVF+GA L+DMY+K
Sbjct: 118 YCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKM 177
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ AR+VFDK+ +RD PS +L+ +
Sbjct: 178 GDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLF 237
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
++ + R +HG+ +R F + V L+D+Y+KCG V VAR +F+Q+ ++ V
Sbjct: 238 PGICKLSNIELCRSIHGYVFRRDF--SSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDV 295
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SW M+ GYA +G + L+LF+KMK V+ + ++ V A + ++G+
Sbjct: 296 SWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCA 355
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
++ ID + T ++ + G ++A L ++ + D W A++ + G+
Sbjct: 356 LQQ-RIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGR-DLVAWSAIIAALVQTGY--- 410
Query: 328 AELALEKLIELEPHDAG-NYVILSNIYARAAN 358
E AL E++ N V L +I A+
Sbjct: 411 PEEALSLFQEMQNQKMKPNRVTLMSILPACAD 442
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 182/396 (45%), Gaps = 39/396 (9%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
F ++ L+ LYS C + A ++FD++ ++ W ++ YA NG + +EL+ ++
Sbjct: 261 FSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKM 320
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
+ + + A A + +E+G+ IH ++ + ++D+ V L+ MYAKC
Sbjct: 321 KLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGET 380
Query: 125 VNARQVFDKILERD---------------------------------PSEATLVTVISAS 151
A+Q+F + RD P+ TL++++ A
Sbjct: 381 EKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPAC 440
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
AD++ L G+ +H F+ + + ++ TALV MYAKCG A F ++ + +V+WN
Sbjct: 441 ADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWN 500
Query: 212 AMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR- 269
++I GYA G A+D+F K++ + PD T VGV+ AC+ D+G +V+
Sbjct: 501 SLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKL 560
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK--L 327
+ D V++ ++D+ G L A L + D W ++ + +GH K +
Sbjct: 561 GFESDCHVKN--ALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAI 618
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVA 363
+ +L P+ +L AA EG+A
Sbjct: 619 SSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMA 654
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 167/343 (48%), Gaps = 38/343 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ LV +YS L A ++FD++P+R++ WN +I + + A++ + + +G
Sbjct: 166 IGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVG 225
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P + + LS IE R IH V R + + V G LID+Y+KC V AR
Sbjct: 226 VEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNG--LIDLYSKCGDVDVAR 283
Query: 129 QVFDKILERDP---------------------------------SEATLVTVISASADIA 155
+VFD+++++D ++ + V+ A+A+
Sbjct: 284 RVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETI 343
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L +G+E+HG + + R + ++ V T L+ MYAKCG + A+ LF L+ + +V+W+A+I
Sbjct: 344 DLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIA 403
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+ +AL LF++M+++ ++P+ +T + +L AC+ L G+ V+ +D
Sbjct: 404 ALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVK-ADMD 462
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
+ T +V + G A +M + D W +L+N
Sbjct: 463 SDLSTGTALVSMYAKCGFFTAALTTFNRMSSR-DIVTWNSLIN 504
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 228/538 (42%), Positives = 326/538 (60%), Gaps = 34/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+AT L+ +Y+ C + A ++FD + R++ W V+I YA NG E A L+ + E G
Sbjct: 296 VATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEG 355
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD T+ + AC+ + + R IH V + TD+ V AL+ MYAKC + +AR
Sbjct: 356 IQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDAR 415
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
QVFD + RD P T + +++A +
Sbjct: 416 QVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLG 475
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL G E++ + + +V + AL+ M AK G V+ AR +F+ + + V++WNAMI
Sbjct: 476 ALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIG 535
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GY++HG++ +AL LF++M K+ +P+ +TFVGVLSACSR G DEGR FF ++ I
Sbjct: 536 GYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIV 595
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P+V+ Y CMVDLLG +G LDEA LI M VKP +W +LL +C++HG++ +AE A E+
Sbjct: 596 PTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAER 655
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
+ ++P+D YV LS++YA A WE VAK+RK+M RGI+K C+WIEV K H F+
Sbjct: 656 CLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVV 715
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
D SHP EIYA+L L +K GY+P T++V HDV +K I HSE+LAIA+G+
Sbjct: 716 EDRSHPLVGEIYAELARLMNAIKREGYIPITQNVLHDVGEQQKEEAISYHSEKLAIAYGV 775
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++ P GT + I KNL++C DCH A KFISK+T REI RD +R+HHFKDG+CSCGDYW
Sbjct: 776 LSLPSGTPIRIYKNLRVCSDCHSASKFISKVTGREIIARDASRFHHFKDGVCSCGDYW 833
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 188/406 (46%), Gaps = 38/406 (9%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T LV +Y + +A Q+FD + R++ +NV++ YA +G +E A EL+YR+ ++G
Sbjct: 195 IGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVG 254
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L P+ +F L C A+ G+ +H + D+ V +LI MY C + AR
Sbjct: 255 LKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGAR 314
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+VFD + RD P T + +++A A A
Sbjct: 315 RVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISA 374
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L RE+H F ++ V TALV MYAKCG +K AR +F+ + + VVSW+AMI
Sbjct: 375 NLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIG 434
Query: 216 GYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
Y +G+ T+A + F MK ++PD +T++ +L+AC G D G + ++ +
Sbjct: 435 AYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKA-DLV 493
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
V ++ + G ++ A I V+ D W A++ LHG+ + A ++
Sbjct: 494 SHVPLGNALIIMNAKHGSVERA-RYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDR 552
Query: 335 LIE--LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
+++ P+ +LS EG L+ RGI ++
Sbjct: 553 MLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTV 598
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 204/464 (43%), Gaps = 88/464 (18%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ LYS C + A Q+FD + + + WN LI YA G + A L+ ++++ GL P
Sbjct: 98 LIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPS 157
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
TF L ACS+ + + G+ +H V+ + +D +G AL+ MY K + +ARQVFD
Sbjct: 158 IITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFD 217
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
+ RD P++ + ++++ AL
Sbjct: 218 GLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAW 277
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G+ +H +++V T+L+ MY CG ++ AR +F+ ++ + VVSW MI GYA
Sbjct: 278 GKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAE 337
Query: 220 HGHSTKALDLFEKMKDE-VQPDHITFVGVLSAC--------------------------- 251
+G+ A LF M++E +QPD IT++ +++AC
Sbjct: 338 NGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLV 397
Query: 252 --------SRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD---LI 300
++ G + R F++M R V ++ M+ +G EA + L+
Sbjct: 398 STALVHMYAKCGAIKDARQVFDAMPRR-----DVVSWSAMIGAYVENGYGTEAFETFHLM 452
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
+ ++PD + LLN+C GH+ ++ +E + D ++V L N
Sbjct: 453 KRSNIEPDGVTYINLLNAC---GHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKH 509
Query: 361 GVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDE 404
G + + + D +++ + +W +A + G + H N E
Sbjct: 510 GSVERARYIFDTMVRRDV-ITW-------NAMIGGYSLHGNARE 545
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 156/359 (43%), Gaps = 79/359 (22%)
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
A ++ RL E G D+ T+ + C+ L G+++ + +I+ + +++ LI
Sbjct: 41 ANDVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIK 100
Query: 117 MYAKCSCVVNARQVFDKILER---------------------------------DPSEAT 143
+Y+ C V ARQ+FD + + +PS T
Sbjct: 101 LYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIIT 160
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
++V+ A + A L G+E+H F + ++ TALV MY K G + AR +F+ L
Sbjct: 161 FLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLH 220
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVL-------------- 248
+ V ++N M+ GYA G KA +LF +M+ ++P+ I+F+ +L
Sbjct: 221 IRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKA 280
Query: 249 --SACSRGGLFDEGRMFFESMVRDYHIDPSVQ---------------HYTCMVDLLGHSG 291
+ C GL D+ R+ S++R Y S++ +T M++ +G
Sbjct: 281 VHAQCMNAGLVDDIRV-ATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENG 339
Query: 292 RLDEACDLIMQMR---VKPDPGVWGALLNSC----------KLHGHVKLAELALEKLIE 337
+++A L M+ ++PD + ++N+C ++H V +A + L+
Sbjct: 340 NIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVS 398
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/548 (42%), Positives = 336/548 (61%), Gaps = 36/548 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G F + L+++Y+ L +A +F+++ R++ WN L+ A+ N +A+ +
Sbjct: 269 LGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGV 328
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWET-DVFVGAALIDMYA 119
Y ++ IG+VPD T + L R IH V R W D+ +G A+IDMYA
Sbjct: 329 YNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYA 388
Query: 120 KCSCVVNARQVFDKILERD----------------------------------PSEATLV 145
K + +AR+VF+ + +D P++ T V
Sbjct: 389 KLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWV 448
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
++++A + + AL QG + HG ++ ++ V T LVDMY KCG + A +LF ++ +
Sbjct: 449 SILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQ 508
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF 264
VSWNA+I+ + +HG+ KA+ LF++M+ E V+PDHITFV +LSACS GL DEG+ F
Sbjct: 509 SSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCF 568
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+ M Y I PS++HY CMVDL G +G L++A + + M V+PD VWGALL +C++H +
Sbjct: 569 QLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHEN 628
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
V+L + L+++E + G YV+LSNIYA+ +WEGV ++R L DRG+KK+ S IE
Sbjct: 629 VELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIE 688
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
V K F +G+ +HP C+EIY++L+ L +MK GYVP V DVE+DEK N++ H
Sbjct: 689 VDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGYVPDYNFVLQDVEDDEKENILTSH 748
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SERLA+AFG+I+TP T L I KNL++C DCH A KFISKITEREI VRD NR+HHFKDG
Sbjct: 749 SERLAMAFGIISTPPKTTLQIFKNLRVCGDCHNATKFISKITEREIIVRDSNRFHHFKDG 808
Query: 505 ICSCGDYW 512
+CSCGDYW
Sbjct: 809 VCSCGDYW 816
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 176/361 (48%), Gaps = 40/361 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF +A +H YS + A LFD + R++ WN +I + NG A+E+
Sbjct: 168 LGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEV 227
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + + D+ T L C L I G IH I+ E D+FV ALI+MYAK
Sbjct: 228 FDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAK 287
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ +A +F+++ RD P TLV++
Sbjct: 288 FGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSL 347
Query: 148 ISASADIAALPQGRELHGFSWRHRFEL-NVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
S +A++ R +HGF R + L ++ + A++DMYAK G + AR +FE L K
Sbjct: 348 ASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKD 407
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMK--DEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
V+SWN++ITGY+ +G + +A+D++ M+ P+ T+V +L+A S+ G +G
Sbjct: 408 VISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAH 467
Query: 265 ESMVRDY-HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+++++ + D V TC+VD+ G G+L +A L ++ + W A+++ LHG
Sbjct: 468 GQLIKNFLYFDIFVS--TCLVDMYGKCGKLADALSLFYEVPHQSSVS-WNAIISCHGLHG 524
Query: 324 H 324
+
Sbjct: 525 Y 525
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 161/350 (46%), Gaps = 39/350 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L+ KL++ Y+ + +A FD+I ++++ WN +I AYA G + A++ + L
Sbjct: 77 LSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTS 136
Query: 69 -LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
L D++TFP ++AC L ++GR++H V++ +E DV++ A+ I Y++ V A
Sbjct: 137 FLQSDHYTFPPVIRACGNL---DDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLA 193
Query: 128 RQVFDKILERDPS---------------------------------EATLVTVISASADI 154
+FD ++ RD T+ +++ +
Sbjct: 194 CNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQL 253
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
+ G +H ++ + E ++ V AL++MYAK G ++ A +F Q++ + +VSWN+++
Sbjct: 254 DDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLL 313
Query: 215 TGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+ + AL ++ KM V PD +T V + S + G F R + R
Sbjct: 314 AAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWF 373
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+ ++D+ G +D A + + VK D W +L+ +G
Sbjct: 374 LHDIALGNAIIDMYAKLGFIDSARKVFEGLPVK-DVISWNSLITGYSQNG 422
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 10/166 (6%)
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
++ + L++ YA G + AR F+Q++ K V +WN+MI+ YA GH A+D F +
Sbjct: 74 SIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFL 133
Query: 235 DE--VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGR 292
+Q DH TF V+ AC G D+GR +V + V + G
Sbjct: 134 STSFLQSDHYTFPPVIRAC---GNLDDGRK-VHCLVLKLGFECDVYIAASFIHFYSRFGF 189
Query: 293 LDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
+ AC+L M ++ D G W A+++ L+G K+AE ALE E+
Sbjct: 190 VSLACNLFDNMMIR-DIGTWNAMISGFYLNG--KVAE-ALEVFDEM 231
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/545 (43%), Positives = 338/545 (62%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF ++T ++ +Y C + +A ++FD + RN WN +I+ YA NG A+ L+
Sbjct: 357 GFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALF 416
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R++ G+ + + AL AC L ++EGRR+HE ++R E++V V ALI MY KC
Sbjct: 417 KRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKC 476
Query: 122 SCVVNARQVFDKI--------------------------------LER-DPSEATLVTVI 148
A QVFD++ LE P TLV++I
Sbjct: 477 KRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSII 536
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A ADI+ Q R +HG+S R + +V V TAL+DMYAKCG V +AR+LF R++ V+
Sbjct: 537 PALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVI 596
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WNAMI GY HG A++LFE+MK + P+ TF+ VLSACS GL DEG+ +F SM
Sbjct: 597 TWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSM 656
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
DY ++P ++HY MVDLLG +G+L EA I +M ++P V+GA+L +CKLH +V+L
Sbjct: 657 KEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVEL 716
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE + +++ ELEP + +V+L+NIYA A+ W+ VA++R M +G++K+ S +++KN
Sbjct: 717 AEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKN 776
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ H F SG +H +IYA+L L +K GYVP T+S+ HDVE+D KA ++ HSE+
Sbjct: 777 EIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEK 835
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIA+GLI T GT + I KNL++C DCH A K IS +T REI +RD+ R+HHFKDG CS
Sbjct: 836 LAIAYGLIRTAPGTTIQIKKNLRVCKDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCS 895
Query: 508 CGDYW 512
CGDYW
Sbjct: 896 CGDYW 900
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 172/369 (46%), Gaps = 37/369 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + AT L ++Y+ C +A ++FDR+P R+ WN L+ YA NG E A+ +
Sbjct: 255 GLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMV 314
Query: 62 YRLLEI-GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
R+ E G PD T L AC+ A+ R +H +R ++ V V A++D+Y K
Sbjct: 315 VRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCK 374
Query: 121 CSCVVNARQVFDKILER---------------------------------DPSEATLVTV 147
C V +AR+VFD + +R D ++ +++
Sbjct: 375 CGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAA 434
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A ++ L +GR +H R E NV V AL+ MY KC +A +F++L K
Sbjct: 435 LHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTR 494
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSWNAMI G +G S A+ LF +M+ + V+PD T V ++ A + + R
Sbjct: 495 VSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGY 554
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+R H+D V T ++D+ GR+ A L R + W A+++ HG K
Sbjct: 555 SIR-LHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDR-HVITWNAMIHGYGSHGSGK 612
Query: 327 LAELALEKL 335
+A E++
Sbjct: 613 VAVELFEEM 621
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 155/324 (47%), Gaps = 38/324 (11%)
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G P TF LK C+A + + GR +H + + AL +MYAKC +A
Sbjct: 220 GSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDA 279
Query: 128 RQVFDKILERD----------------------------------PSEATLVTVISASAD 153
R+VFD++ RD P TLV+V+ A AD
Sbjct: 280 RRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACAD 339
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
AL RE+H F+ R F+ V V TA++D+Y KCG V AR +F+ ++++ VSWNAM
Sbjct: 340 AQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAM 399
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I GYA +G +T+AL LF++M E V ++ + L AC G DEGR E +VR
Sbjct: 400 IKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVR-IG 458
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
++ +V ++ + R D A + ++ K W A++ C +G + A + L
Sbjct: 459 LESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVS-WNAMILGCTQNGSSEDA-VRL 516
Query: 333 EKLIELEPHDAGNYVILSNIYARA 356
++LE ++ ++S I A A
Sbjct: 517 FSRMQLENVKPDSFTLVSIIPALA 540
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/545 (42%), Positives = 337/545 (61%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF ++T LV +YS C + A +FD + R + WN +I Y +G E A+ ++
Sbjct: 161 GFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIF 220
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++L+ G+ P N T AL AC+ L +E G+ +H+ V + K ++DV V +LI MY+KC
Sbjct: 221 QKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKC 280
Query: 122 -------------------------------SCVVNARQVFDKILERD--PSEATLVTVI 148
CV A F ++ R+ P T+V+VI
Sbjct: 281 KRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVI 340
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A A+++ Q + +HG R + NV V TALVDMYAKCG + AR LF+ + + V+
Sbjct: 341 PALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVI 400
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WNAMI GY HG +++LF++MK ++P+ ITF+ LSACS GL +EG FFESM
Sbjct: 401 TWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESM 460
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+DY I+P++ HY MVDLLG +GRL++A D I +M +KP V+GA+L +CK+H +V L
Sbjct: 461 KKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDL 520
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E A ++ +L P D G +V+L+NIYA A+ W VAK+R +M G++K+ CS +E+ N
Sbjct: 521 GEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGN 580
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ H+F SG SHP +IY+ L+ L ++ AGYVP T S+ HDVE+D K ++ HSE+
Sbjct: 581 EVHSFYSGTTSHPQSKKIYSYLETLVDEIRAAGYVPDTNSI-HDVEDDVKVQLLNTHSEK 639
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGL+NT GT + I KNL++C DCH A K+IS +T REI VRD++R+H FKDG+CS
Sbjct: 640 LAIAFGLLNTSTGTPIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHLFKDGVCS 699
Query: 508 CGDYW 512
CGDYW
Sbjct: 700 CGDYW 704
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 203/413 (49%), Gaps = 38/413 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF ++ T +V++Y+ C +++A+ +FDR+P+R+L WN +I YA NG +VA+ L
Sbjct: 60 GFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLV 119
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+ E G PD+ T L A + + G +H V+R +E+ V V AL+DMY+KC
Sbjct: 120 LRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKC 179
Query: 122 SCVVNARQVFDKILER---------------------------------DPSEATLVTVI 148
V AR +FD + R P+ T++ +
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGAL 239
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A AD+ L +G+ +H + + + +V V +L+ MY+KC V +A ++F+ LR K +V
Sbjct: 240 HACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLV 299
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNAMI GYA +G +AL+ F +M+ ++PD T V V+ A + + + + +
Sbjct: 300 SWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLV 359
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+R + +D +V T +VD+ G + A L M + W A+++ HG K
Sbjct: 360 IRRF-LDKNVFVMTALVDMYAKCGAIHTARKLFDMMNAR-HVITWNAMIDGYGTHGLGKT 417
Query: 328 A-ELALE-KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
+ EL E K ++P+D LS EG+ + D GI+ ++
Sbjct: 418 SVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTM 470
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 149/297 (50%), Gaps = 35/297 (11%)
Query: 44 LIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK 103
+++ YA + + A+ + R+ + P + F + LK C S ++ G+ IH VI +
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 104 WETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------------------------- 138
+ ++F +++MYAKC + +A +FD++ ERD
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 139 --------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCG 190
P T+V+++ A AD L G +HG+ R FE V V TALVDMY+KCG
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 191 LVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLS 249
V +AR +F+ + + VVSWN+MI GY G + A+ +F+KM DE VQP ++T +G L
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240
Query: 250 ACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK 306
AC+ G + G+ F +V +D V ++ + R+D A D+ +R K
Sbjct: 241 ACADLGDLERGK-FVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNK 296
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 6/246 (2%)
Query: 114 LIDMYAKCSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHR 171
++ YAK S + +A F ++ P ++ D + L +G+E+HG
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
F N+ T +V+MYAKC + A N+F+++ E+ +V WN MI+GYA +G + AL L
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 232 KMKDEV-QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+M +E +PD IT V +L A + L G M V + V T +VD+
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIG-MAVHGYVLRAGFESLVNVSTALVDMYSKC 179
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
G + A + M + W ++++ G + A L +K+++ E N ++
Sbjct: 180 GSVSIARVIFDGMDHRTVVS-WNSMIDGYVQSGDAEGAMLIFQKMLD-EGVQPTNVTVMG 237
Query: 351 NIYARA 356
++A A
Sbjct: 238 ALHACA 243
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/539 (42%), Positives = 336/539 (62%), Gaps = 36/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++T ++ Y C + A +FD +P RN WN +I YA NG A+ L++R+++ G
Sbjct: 156 VSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEG 215
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ + + AL+AC L ++E RR+HE ++R ++V V ALI YAKC A
Sbjct: 216 VDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAA 275
Query: 129 QVFDKILERD----------------------------------PSEATLVTVISASADI 154
QVF+++ + P TLV+VI A ADI
Sbjct: 276 QVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADI 335
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
+ Q R +HG+S RH+ + +V V TAL+DMY+KCG V +AR LF+ R++ V++WNAMI
Sbjct: 336 SDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMI 395
Query: 215 TGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
GY HG A++LFE+MK P+ TF+ VL+ACS GL DEG+ +F SM +DY +
Sbjct: 396 HGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGL 455
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
+P ++HY MVDLLG +G+LDEA I M ++P V+GA+L +CKLH +V+LAE + +
Sbjct: 456 EPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQ 515
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
+ EL P + +V+L+NIYA A+ W+ VA++R M +G++K+ S I++KN+ H F
Sbjct: 516 IIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFY 575
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
SG +H + +IYA+L L +K+ GYVP T+S+ HDVE+D KA ++ HSE+LAIA+G
Sbjct: 576 SGSTNHQHAKDIYARLAKLIEEIKDMGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAYG 634
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LI T GT + I KNL++C+DCH A K IS +T REI +RD+ R+HHFKDG CSCGDYW
Sbjct: 635 LIRTAPGTTIQIKKNLRVCNDCHNATKLISLLTGREIIMRDIQRFHHFKDGKCSCGDYW 693
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 162/371 (43%), Gaps = 39/371 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + +T L ++Y C +A ++FDR+P R+ WN ++ YA NG A+E
Sbjct: 46 GLASESIASTALANMYFKCRRPADARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAV 105
Query: 62 YRLL--EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
R+ E G PD+ T L AC+ A+ R +H +R + V V A++D Y
Sbjct: 106 VRMQGEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYC 165
Query: 120 KCSCVVNARQVFDKILER---------------------------------DPSEATLVT 146
KC V AR VFD + R D ++A+++
Sbjct: 166 KCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLA 225
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+ A ++ L + R +H R NV V AL+ YAKC +A +F +L K+
Sbjct: 226 ALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKK 285
Query: 207 V-VSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
+SWNAMI G+ + A LF +M+ + V+PD T V V+ A + + R
Sbjct: 286 TRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIH 345
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+R + +D V T ++D+ GR+ A L R + W A+++ HG
Sbjct: 346 GYSIR-HQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDR-HVITWNAMIHGYGSHGF 403
Query: 325 VKLAELALEKL 335
+ A E++
Sbjct: 404 GQAAVELFEEM 414
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 134/302 (44%), Gaps = 42/302 (13%)
Query: 75 TFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI 134
TF LK C+A + + GR +H + ++ AL +MY KC +AR+VFD++
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 135 LERD-----------------------------------PSEATLVTVISASADIAALPQ 159
RD P TLV+V+ A AD AL
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
RE+H F+ R + V V TA++D Y KCG V+ AR +F+ + + VSWNAMI GYA
Sbjct: 138 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYAD 197
Query: 220 HGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
+G++T+A+ LF +M E V + + L AC G DE R E +VR + +V
Sbjct: 198 NGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVR-VGLSSNVS 256
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL-----NSCKLHGHVKLAELALE 333
++ R D A + ++ K W A++ N C A + LE
Sbjct: 257 VTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLE 316
Query: 334 KL 335
+
Sbjct: 317 NV 318
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 112/248 (45%), Gaps = 8/248 (3%)
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P T ++ A A L GR +H TAL +MY KC AR +
Sbjct: 14 PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE---VQPDHITFVGVLSACSRGG 255
F+++ + V+WNA++ GYA +G + A++ +M+ E +PD +T V VL AC+
Sbjct: 74 FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
R +R +D V T ++D G ++ A + M V+ + W A+
Sbjct: 134 ALHACREVHAFALR-AGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVR-NSVSWNAM 191
Query: 316 LNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYA--RAANWEGVAKLRKLMIDRG 373
++ +G+ A ++++ E D + +L+ + A + V ++ +L++ G
Sbjct: 192 IDGYADNGNATEAMALFWRMVQ-EGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVG 250
Query: 374 IKKSIACS 381
+ +++ +
Sbjct: 251 LSSNVSVT 258
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/545 (42%), Positives = 331/545 (60%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF ++T L +YS C + A +FD + Q+ + WN ++ Y NG E AI ++
Sbjct: 278 GFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVF 337
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++LE G+ P T AL AC+ L +E G+ +H+ V + +D+ V +LI MY+KC
Sbjct: 338 EKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKC 397
Query: 122 SCVVNARQVFD---------------------------------KILERDPSEATLVTVI 148
V A +F+ K L P T+V+VI
Sbjct: 398 KRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVI 457
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A A+++ + +HG R + N+ V TALVDMY+KCG + +AR LF+ + ++ V+
Sbjct: 458 PALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVI 517
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WNAMI GY HG ALDLF+KMK V+P+ IT++ V+SACS GL DEG F+SM
Sbjct: 518 TWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSM 577
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+DY ++PS+ HY MVDLLG +GR+ EA D I M + P V+GA+L +CK+H ++++
Sbjct: 578 KQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEV 637
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E A +KL EL P + G +V+L+NIYA + W VA++RK M +G+KK+ CS +E++N
Sbjct: 638 GEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRN 697
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ H+F SG +HP IYA L+ L +K AGYVP T + DVE+D + ++ HSE+
Sbjct: 698 EVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEK 756
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGL+NT GT + + KNL++C DCH A K+IS +T REI VRD+ R+HHFK+GICS
Sbjct: 757 LAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICS 816
Query: 508 CGDYW 512
CGDYW
Sbjct: 817 CGDYW 821
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 176/355 (49%), Gaps = 36/355 (10%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+ TKLV L+S ++ A ++F+ I + L++ +++ YA N E A+ R+
Sbjct: 82 LFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYD 141
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
+ P + F + LK C + ++ G+ IH +I N + +VF +++MYAKC + +A
Sbjct: 142 DVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDA 201
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
++FD++ ERD P TLVTV+ A+AD+
Sbjct: 202 YKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADV 261
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L G+ +HG++ R F V + TAL DMY+KCG V+ AR +F+ + +K VVSWN+M+
Sbjct: 262 GLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMM 321
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
GY +G KA+ +FEKM +E + P +T + L AC+ G + G+ F V ++
Sbjct: 322 DGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGK-FVHKFVDQLNL 380
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ ++ + R+D A D+ + + W A++ +G V A
Sbjct: 381 GSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVS-WNAMILGYAQNGRVSEA 434
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 198/407 (48%), Gaps = 44/407 (10%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T +V++Y+ C + +A+++FDR+P+R+L WN +I ++ NG + A+EL R+ + G
Sbjct: 186 TGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQR 245
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD+ T L A + + + G+ IH IR + V + AL DMY+KC V AR +
Sbjct: 246 PDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLI 305
Query: 131 FD-------------------------------KILER--DPSEATLVTVISASADIAAL 157
FD K+LE DP+ T++ + A AD+ L
Sbjct: 306 FDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDL 365
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
+G+ +H F + ++ V +L+ MY+KC V +A ++F L + VSWNAMI GY
Sbjct: 366 ERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGY 425
Query: 218 AMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
A +G ++AL+ F +MK ++PD T V V+ A + + + ++R +D +
Sbjct: 426 AQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSC-LDKN 484
Query: 277 VQHYTCMVDLLGHSGRLDEA---CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
+ T +VD+ G + A D+I V W A+++ HG + A +
Sbjct: 485 IFVTTALVDMYSKCGAIHMARKLFDMISDRHVI----TWNAMIDGYGTHGLGRAALDLFD 540
Query: 334 KLIE--LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
K+ + +EP+D ++S EG+ + + D G++ S+
Sbjct: 541 KMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSM 587
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 149/326 (45%), Gaps = 26/326 (7%)
Query: 45 IRAYAWNGPYEVAIELYYRLLE----IGLVPDNFTFP---FALKACSALS---AIEEGRR 94
I ++ + P V +EL + E I LV N + F K S S +I E R
Sbjct: 43 IPSHVYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAAR 102
Query: 95 IHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA-----RQVFDKILERDPSEATLVTVIS 149
+ E I +K + + ++ YAK S + A R +D + P ++
Sbjct: 103 VFEP-IDDKLDA---LYHTMLKGYAKNSSLETALAFLCRMRYDDV---KPVVYNFTYLLK 155
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
D A L +G+E+HG + F NV T +V+MYAKC + A +F+++ E+ +VS
Sbjct: 156 VCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVS 215
Query: 210 WNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WN +I G++ +G + KAL+L +M+DE Q PD IT V VL A + GL G+ +
Sbjct: 216 WNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAI 275
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
R V T + D+ G + E LI + W ++++ +G + A
Sbjct: 276 R-AGFAKLVNISTALADMYSKCGSV-ETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKA 333
Query: 329 ELALEKLIELEPHDAGNYVILSNIYA 354
EK++E E D I+ ++A
Sbjct: 334 IAVFEKMLE-EGIDPTGVTIMEALHA 358
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/534 (40%), Positives = 336/534 (62%), Gaps = 34/534 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ LY+ + +A +LF+ +P+ +L W+++I YA + + A++L+ R+ + +VP+
Sbjct: 278 LLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPN 337
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
NFTF L+AC++ +++ G++IH V++ ++VFV A++D+YAKC + N+ ++F+
Sbjct: 338 NFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFE 397
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
++ +R+ P+E T +V+ ASA +AAL
Sbjct: 398 ELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEP 457
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G ++H + + + + V +L+DMYAKCG + AR F+++ ++ VSWNAMI GY+M
Sbjct: 458 GLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSM 517
Query: 220 HGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
HG S +AL+LF+ M+ + +P+ +TFVGVLSACS GL +G+ FESM +DY I P ++
Sbjct: 518 HGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIE 577
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
HYTCMV LLG GR DEA LI ++ +P VW ALL +C +H V L + + ++E+
Sbjct: 578 HYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEM 637
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDAS 398
EPHD +V+LSN+YA A W+ VA +RK M + ++K SW+E + H F GD S
Sbjct: 638 EPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTS 697
Query: 399 HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTP 458
HP+ I A L+WL + ++AGYVP +V DV++DEK + HSERLA+A+GLI TP
Sbjct: 698 HPDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTP 757
Query: 459 DGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ I KNL+IC DCH +K ISK+ +REI +RD+NR+HHF+ G+CSCGDYW
Sbjct: 758 LSCSIRIIKNLRICIDCHTVMKLISKVVQREIVIRDINRFHHFRHGVCSCGDYW 811
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 196/408 (48%), Gaps = 42/408 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T L+ YS + A +FD I +++ W ++ YA N YE +++L+ ++ +G
Sbjct: 173 VGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMG 232
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P+NFT ALK+C L A G+ +H ++ ++ D+FVG AL+++YAK +++A+
Sbjct: 233 YKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQ 292
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
++F+++ + D P+ T +V+ A A
Sbjct: 293 RLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSV 352
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+L G+++H + NV V A++D+YAKCG ++ + LFE+L ++ V+WN +I
Sbjct: 353 SLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIV 412
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD-YHI 273
GY G +A++LF M + ++QP +T+ VL A + + G ++ Y+
Sbjct: 413 GYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNK 472
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
D V + ++D+ GR+++A L K D W A++ +HG + + L L
Sbjct: 473 DTVVAN--SLIDMYAKCGRINDA-RLTFDKMNKRDEVSWNAMICGYSMHG-MSMEALNLF 528
Query: 334 KLIE---LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
+++ +P+ +LS ++G A + D IK I
Sbjct: 529 DMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCI 576
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 163/366 (44%), Gaps = 43/366 (11%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L++ Y + L +A +LFD +PQ N + L + Y+ + + A+ R+ + G +
Sbjct: 76 LLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVN 135
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
F F LK ++ +H V + D FVG ALID Y+ V AR VFD
Sbjct: 136 PFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFD 195
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
I +D P+ T+ + + + A
Sbjct: 196 DICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNV 255
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G+ +HG + + ++ ++ V AL+++YAK G + A+ LFE++ + ++ W+ MI YA
Sbjct: 256 GKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQ 315
Query: 220 HGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
S +ALDLF +M+ V P++ TF VL AC+ D G+ S V + ++ +V
Sbjct: 316 SDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQ-IHSCVLKFGLNSNVF 374
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL--AELALEKLI 336
++D+ G ++ + L ++ + D W ++ G+V+L E A+
Sbjct: 375 VSNAIMDVYAKCGEIENSMKLFEELPDRNDV-TWNTIIV-----GYVQLGDGERAMNLFT 428
Query: 337 ELEPHD 342
+ HD
Sbjct: 429 HMLEHD 434
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/545 (42%), Positives = 331/545 (60%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF ++T LV +Y+ C L A QLFD + +RN+ WN +I AY N + A+ ++
Sbjct: 266 GFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIF 325
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++L+ G+ P + + AL AC+ L +E GR IH+ + + +V V +LI MY KC
Sbjct: 326 QKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKC 385
Query: 122 SCVVNARQVFDKILER---------------------------------DPSEATLVTVI 148
V A +F K+ R P T V+VI
Sbjct: 386 KEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVI 445
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A A+++ + +HG R + NV V TALVDMYAKCG + +AR +F+ + E+ V
Sbjct: 446 TAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVT 505
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WNAMI GY HG AL+LFE+M K ++P+ +TF+ V+SACS GL + G F M
Sbjct: 506 TWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMM 565
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+Y I+ S+ HY MVDLLG +GRL+EA D IMQM VKP V+GA+L +C++H +V
Sbjct: 566 KENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNF 625
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE A E+L EL P D G +V+L+NIY A+ WE V ++R M+ +G++K+ CS +E+KN
Sbjct: 626 AEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKN 685
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ H+F SG +HP+ +IYA L+ L +KEAGYVP T V VEND K ++ HSE+
Sbjct: 686 EVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEK 744
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAI+FGL+NT GT + + KNL++C DCH A K+IS +T REI VRD+ R+HHFK+G CS
Sbjct: 745 LAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACS 804
Query: 508 CGDYW 512
CGDYW
Sbjct: 805 CGDYW 809
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 183/368 (49%), Gaps = 36/368 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF T L ++Y+ C ++ A ++FDR+P+R+L WN ++ Y+ NG +A+E+
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ E L P T L A SAL I G+ IH +R+ +++ V + AL+DMYAKC
Sbjct: 225 KSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKC 284
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ ARQ+FD +LER+ P++ +++ +
Sbjct: 285 GSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL 344
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A AD+ L +GR +H S + NV V +L+ MY KC V A ++F +L+ + +V
Sbjct: 345 HACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLV 404
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNAMI G+A +G AL+ F +M+ V+PD T+V V++A + + + +
Sbjct: 405 SWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVV 464
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+R +D +V T +VD+ G + A LI M + W A+++ HG K
Sbjct: 465 MRSC-LDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHGFGKA 522
Query: 328 AELALEKL 335
A E++
Sbjct: 523 ALELFEEM 530
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 174/340 (51%), Gaps = 36/340 (10%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
TKLV L+ + A ++F+ I + L++ +++ +A + A++ + R+ +
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
P + F + LK C + + G+ IH ++++ + D+F L +MYAKC V AR+V
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
FD++ ERD PS T+V+V+ A + + +
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
G+E+HG++ R F+ V + TALVDMYAKCG ++ AR LF+ + E+ VVSWN+MI Y
Sbjct: 253 SVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 312
Query: 218 AMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
+ + +A+ +F+KM DE V+P ++ +G L AC+ G + GR F + + +D +
Sbjct: 313 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR-FIHKLSVELGLDRN 371
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
V ++ + +D A + +++ + W A++
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVS-WNAMI 410
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEV 237
+T LV ++ + G V A +FE + K V ++ M+ G+A KAL F +M+ D+V
Sbjct: 72 QTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDV 131
Query: 238 QPDHITFVGVLSAC 251
+P F +L C
Sbjct: 132 EPVVYNFTYLLKVC 145
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/546 (40%), Positives = 327/546 (59%), Gaps = 35/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P + T LV +Y+ C + A +FDR+P++N+ W +LI YA G +VA+EL
Sbjct: 178 GLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELL 237
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + + P+ TF L+ C+ +A+E G+++H +I++ + +++V +LI MY KC
Sbjct: 238 ETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKC 297
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ AR++F + RD P + T +V+
Sbjct: 298 GGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVL 357
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
++ + A L +G+ +H + L+V +++ALV MYAKCG + A +F Q+ E+ VV
Sbjct: 358 TSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVV 417
Query: 209 SWNAMITGY-AMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
+W A+ITG A HG +AL+ F++MK + ++PD +TF VLSAC+ GL +EGR F S
Sbjct: 418 AWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRS 477
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M DY I P V+HY+C VDLLG +G L+EA ++I+ M P P VWGALL++C++H V+
Sbjct: 478 MYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVE 537
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
E A E +++L+P D G YV LS+IYA A +E K+R++M R + K SWIEV
Sbjct: 538 RGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVD 597
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
K H F D SHP ++IY +L L ++KE GYVP T V HDV+ ++K ++ HSE
Sbjct: 598 GKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDTRFVLHDVDEEQKERILFSHSE 657
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
RLAI +GL+ TP G + I KNL++C DCH A KFISK+ REI RD R+HHF DG+C
Sbjct: 658 RLAITYGLMKTPPGMPIRIVKNLRVCGDCHTATKFISKVVGREIIARDAQRFHHFADGVC 717
Query: 507 SCGDYW 512
SCGD+W
Sbjct: 718 SCGDFW 723
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 196/415 (47%), Gaps = 43/415 (10%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P L L+ +Y+ C L +A ++FD I RN+ W +I A+ A + Y
Sbjct: 77 GIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCY 136
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G PD TF L A + ++ G+++H +++ E + VG +L+ MYAKC
Sbjct: 137 ETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKC 196
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ AR +FD++ E++ P++ T +++
Sbjct: 197 GDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASIL 256
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
AAL G+++H + + + + V +L+ MY KCG ++ AR LF L + VV
Sbjct: 257 QGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVV 316
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W AM+TGYA G +A++LF +M+ + ++PD +TF VL++CS EG+ + +
Sbjct: 317 TWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQL 376
Query: 268 VR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS-CKLHGHV 325
V Y++D +Q + +V + G +D+A + QM + + W A++ C HG
Sbjct: 377 VHAGYNLDVYLQ--SALVSMYAKCGSMDDASLVFNQMSER-NVVAWTAIITGCCAQHGRC 433
Query: 326 KLAELALEKLIE--LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
+ A +++ + ++P +LS EG R + +D GIK +
Sbjct: 434 REALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMV 488
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 186/423 (43%), Gaps = 97/423 (22%)
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL 135
F L+ C+ L ++E+GR +H ++++ + + ++ L+ MYAKC + +AR+VFD I
Sbjct: 50 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIR 109
Query: 136 ERD---------------------------------PSEATLVTVISASADIAALPQGRE 162
+R+ P + T V++++A + L G++
Sbjct: 110 DRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQK 169
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
+H EL +V T+LV MYAKCG + AR +F++L EK VV+W +I GYA G
Sbjct: 170 VHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQ 229
Query: 223 STKALDLFEKMKD-EVQPDHITFVGVLSACSR---------------------------- 253
AL+L E M+ EV P+ ITF +L C+
Sbjct: 230 VDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNS 289
Query: 254 --------GGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR- 304
GGL + ++F + RD V +T MV G DEA +L +M+
Sbjct: 290 LITMYCKCGGLEEARKLFSDLPHRD------VVTWTAMVTGYAQLGFHDEAINLFRRMQQ 343
Query: 305 --VKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPH-DAGNYVILSNIYARAANWEG 361
+KPD + ++L SC ++ + ++L+ + D L ++YA+ + +
Sbjct: 344 QGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDD 403
Query: 362 VAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG-DASHPNCDEIYAKLKWLEGRMKEAG 420
+ + M +R + +W A ++G A H C E L++ + +MK+ G
Sbjct: 404 ASLVFNQMSERNV-----VAWT-------AIITGCCAQHGRCRE---ALEYFD-QMKKQG 447
Query: 421 YVP 423
P
Sbjct: 448 IKP 450
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/546 (42%), Positives = 343/546 (62%), Gaps = 40/546 (7%)
Query: 6 HPVLATKLVHLYSA---CDCLHNAHQLFDRIPQRNLFLWNVLIRAYA-WNGPYEVAIELY 61
+P + TKL++ ++ + +AH++FD+IPQ ++ L+N + R YA ++ P AI L
Sbjct: 65 NPTVLTKLINFCTSNPTIASMDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLR-AILLC 123
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++L GL+PD++TF LKAC+ L A+EEG+++H ++ +++V LI+MY C
Sbjct: 124 SQVLCSGLLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTAC 183
Query: 122 SCVVNARQVFDKILER---------------------------------DPSEATLVTVI 148
+ V AR+VFDKI E P++ T++ +
Sbjct: 184 NDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVAL 243
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
S+ A + AL GR +H + ++ F+ VKV TAL+DMYAKCG + A ++F+ + +
Sbjct: 244 SSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQ 303
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W+AMI YA HGH ++A+ + +MK +VQPD ITF+G+L ACS GL +EG +F SM
Sbjct: 304 AWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSM 363
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+Y I PS++HY CM+DLLG +GRL+EAC I ++ +KP P +W LL+SC HG+V++
Sbjct: 364 THEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEM 423
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
A+L ++++ EL+ G+YVILSN+ AR W+ V LRK+M+D+G K CS IEV N
Sbjct: 424 AKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNN 483
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFH-DVENDEKANMICCHSE 446
H F SGD H ++ L L +K AGYVP T VF+ D+E++EK ++ HSE
Sbjct: 484 VVHEFFSGDGVHSTSTILHHALDELVKELKLAGYVPDTSLVFYADIEDEEKEIVLRYHSE 543
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LAI +GL+NTP GT + + KNL++C DCH A KFIS I R+I +RDV R+HHFKDG C
Sbjct: 544 KLAITYGLLNTPPGTTIRVVKNLRVCVDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKC 603
Query: 507 SCGDYW 512
SCGDYW
Sbjct: 604 SCGDYW 609
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 140/303 (46%), Gaps = 35/303 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G G + + L+++Y+AC+ + A ++FD+I + + +N +I + A N A+ L
Sbjct: 164 LGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALAL 223
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ L E GL P + T AL +C+ L A++ GR IHE V +N ++ V V ALIDMYAK
Sbjct: 224 FRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAK 283
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + +A VF + RD P E T + +
Sbjct: 284 CGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGI 343
Query: 148 ISASADIAALPQGRE-LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+ A + + +G E H + + ++K ++D+ + G ++ A ++L K
Sbjct: 344 LYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKP 403
Query: 207 V-VSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+ W +++ + HG+ A + +++ + +V + + C+R G +D+ +
Sbjct: 404 TPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRK 463
Query: 266 SMV 268
MV
Sbjct: 464 MMV 466
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/576 (40%), Positives = 332/576 (57%), Gaps = 69/576 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G HP+L KL Y++ L + LF R ++F W +I +A G +E A+ Y
Sbjct: 57 GLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFY 116
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++L G+ P+ FTF LK C IE G+ +H ++ +++D++V L+D+YA+
Sbjct: 117 AQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARG 172
Query: 122 SCVVNARQV-------------------------------FDKILERD------------ 138
VV+A+Q+ FD + ERD
Sbjct: 173 GDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYT 232
Query: 139 ---------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
P+E T+++V+SA + AL GR +H + + + NV
Sbjct: 233 QNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVH 292
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDE 236
V TALVDMY+KCG ++ AR +F+++ +K VV+WN+MI GYAMHG S +AL LF+ M +
Sbjct: 293 VGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMG 352
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+ P +ITF+G+LSAC G EG F M +Y I+P ++HY CMV+LLG +G +++A
Sbjct: 353 LHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQA 412
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARA 356
+L+ M ++PDP +WG LL +C+LHG + L E +E L++ ++G Y++LSNIYA
Sbjct: 413 YELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAV 472
Query: 357 ANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRM 416
NW+GVA+LR +M D G+KK CS IEV NK H FL+G +HP EIY L+ + G +
Sbjct: 473 GNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWL 532
Query: 417 KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCH 476
K GY P T+ V HD+ EK + HSE+LAIAFGLINT GT + I KNL++C DCH
Sbjct: 533 KSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCH 592
Query: 477 IAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
K ISKIT R+I VRD NR+HHF +G CSCGDYW
Sbjct: 593 EVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 628
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 84/199 (42%), Gaps = 10/199 (5%)
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF 199
S L +I S I+ L Q +H +RH + + + L YA G + + LF
Sbjct: 29 STNRLAVLIDKSKTISHLLQ---IHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALF 85
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFD 258
+ + V W A+I G+A+ G +AL+ + +M + V+P+ TF +L C +
Sbjct: 86 GRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IE 141
Query: 259 EGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
G+ V+ D + T ++D+ G + A L M K + A+L
Sbjct: 142 PGKALHSQAVK-LGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSL-TAMLTC 199
Query: 319 CKLHGHVKLAELALEKLIE 337
HG + A + + + E
Sbjct: 200 YAKHGELDAARVLFDGMEE 218
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/534 (44%), Positives = 316/534 (59%), Gaps = 34/534 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L++LY+ C + NA ++FD IP +N W I Y G AI+++ RLLE+GL PD
Sbjct: 149 LINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPD 208
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+F+ L AC + G I E + N +VFV AL+D Y KC + AR VFD
Sbjct: 209 SFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFD 268
Query: 133 KILERD----------------PSEA-----------------TLVTVISASADIAALPQ 159
+LE++ P EA +V V+ + A + AL
Sbjct: 269 GMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALEL 328
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G + F N + TAL+DMYAKCG + A +F +R+K V WNA I+G AM
Sbjct: 329 GDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAM 388
Query: 220 HGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
GH AL LF +M K ++PD TFVG+L AC+ GL +EGR +F SM + + P ++
Sbjct: 389 SGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIE 448
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
HY CMVDLLG +G LDEA LI M ++ + VWGALL C+LH +L E+ L+KLI L
Sbjct: 449 HYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIAL 508
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDAS 398
EP +GNYV+LSNIYA + WE AK+R +M +RG+KK SWIEV H FL GD S
Sbjct: 509 EPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTS 568
Query: 399 HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTP 458
HP ++IYAKL L +K AGYVP T+ V D+E +EK + I CHSE+LA+AFGLI+T
Sbjct: 569 HPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEEEEKEHFIGCHSEKLAVAFGLISTA 628
Query: 459 DGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++L+ KNL++C DCH AIK IS+I REI VRD NR+H F DG+CSC DYW
Sbjct: 629 PNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/337 (34%), Positives = 180/337 (53%), Gaps = 36/337 (10%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
+ ++ D+ + N+FL+N +IR N ++ +IE+Y+ + + GL PD+FTFPF LKAC+
Sbjct: 61 SFRILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACAR 120
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
+ E G ++H V++ E D FV +LI++Y KC + NA +VFD I +++
Sbjct: 121 VLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTAT 180
Query: 139 --------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
P +LV V+SA L G + + +
Sbjct: 181 ISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGM 240
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
NV V TALVD Y KCG ++ AR++F+ + EK +VSW++MI GYA +G +ALDLF K
Sbjct: 241 VRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFK 300
Query: 233 MKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
M +E ++PD VGVL +C+R G + G + + +D SV T ++D+ G
Sbjct: 301 MLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLG-TALIDMYAKCG 359
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
R+D A ++ MR K D VW A ++ + GHVK A
Sbjct: 360 RMDRAWEVFRGMR-KKDRVVWNAAISGLAMSGHVKDA 395
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 121/269 (44%), Gaps = 38/269 (14%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+AT LV Y C + A +FD + ++N+ W+ +I+ YA NG + A++L++++L G
Sbjct: 246 VATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEG 305
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L PD + L +C+ L A+E G + N++ + +G ALIDMYAKC + A
Sbjct: 306 LKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAW 365
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+VF + ++D P T V ++ A
Sbjct: 366 EVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAG 425
Query: 156 ALPQGRELHGFSWRHRFELNVKVK--TALVDMYAKCGLVKVARNLFEQL-REKRVVSWNA 212
+ +GR S F L +++ +VD+ + G + A L + + E + W A
Sbjct: 426 LVEEGRRYFN-SMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGA 484
Query: 213 MITGYAMHGHSTKALDLFEKMKDEVQPDH 241
++ G +H T+ +++ K ++P H
Sbjct: 485 LLGGCRLH-RDTQLVEVVLKKLIALEPWH 512
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 9/144 (6%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
+ VL T L+ +Y+ C + A ++F + +++ +WN I A +G + A+ L+ ++
Sbjct: 344 NSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQME 403
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIH---EDVIRNKWETDVFVGAALIDMYAKCS 122
+ G+ PD TF L AC+ +EEGRR E V E + + ++D+ +
Sbjct: 404 KSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHY--GCMVDLLGRAG 461
Query: 123 CVVNARQVFDKILERDPSEATLVT 146
C+ A Q+ + P EA +
Sbjct: 462 CLDEAHQLIKSM----PMEANAIV 481
>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brachypodium distachyon]
Length = 654
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/552 (42%), Positives = 333/552 (60%), Gaps = 43/552 (7%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F P L+T+L+ Y+A L A Q+FD P +N+F+WN L++A A + A+
Sbjct: 104 FRSDPFLSTRLIEAYAALGALPAARQVFDETPVKNIFVWNALLKALALADHGDEALARLA 163
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEG-----RRIHEDVIRNKWETDVFVGAALIDM 117
+ +G+ D++++ LKAC A+SA R +H IR + V LID
Sbjct: 164 DMGRLGVPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYALHTHVATTLIDC 223
Query: 118 YAKCSCVVNARQVFDKILERD-----------------------------------PSEA 142
YAK V A VF + ER+ P+
Sbjct: 224 YAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMASDADLVPNSI 283
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T+V+V++A A + AL G+ LH + R F+ V V AL+ MY +CG ++V R++F+ +
Sbjct: 284 TIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLEVGRHIFKWI 343
Query: 203 REKR-VVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEG 260
+R VVSWN++I+GY MHG +A+ +FE+M P ITF+ VL ACS GL +EG
Sbjct: 344 GHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVLGACSHAGLVNEG 403
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
+M FESMV +Y + P +HY CMVDLLG +G+LDEA +LI M ++P P VWGALL +C+
Sbjct: 404 KMLFESMV-EYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQVWGALLGACR 462
Query: 321 LHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIAC 380
+HGHV+ AE+A L +LEP +AGNYV+L++IYARA V L++L+ + ++K C
Sbjct: 463 IHGHVEYAEIACSHLFDLEPRNAGNYVLLADIYARAKLHNQVGVLKELLEEHALEKVTGC 522
Query: 381 SWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANM 440
SWIEVK K H+F S D +P +++ A + +MK GYVP T V +D+E +EK +
Sbjct: 523 SWIEVKKKLHSFTSVDNKNPPVEQLQALIGEFVAQMKNQGYVPDTGIVLYDIEGEEKERI 582
Query: 441 ICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHH 500
+ HSE+LA+AFGLINT G + ITKNL++C+DCH KFISK TEREI VRDVNR+HH
Sbjct: 583 LIGHSEKLAVAFGLINTCSGEVIRITKNLRLCEDCHSVTKFISKFTEREIVVRDVNRFHH 642
Query: 501 FKDGICSCGDYW 512
F+DG+CSCGDYW
Sbjct: 643 FRDGVCSCGDYW 654
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/545 (42%), Positives = 333/545 (61%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF +AT LV +Y+ C L A LFD + +RN+ WN +I AY N + A+ ++
Sbjct: 266 GFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIF 325
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++L+ G+ P + + AL AC+ L +E GR IH+ + + + +V V +LI MY KC
Sbjct: 326 QKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKC 385
Query: 122 SCVVNARQVFDKILER---------------------------------DPSEATLVTVI 148
V A +F K+ R P T V+VI
Sbjct: 386 KEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVI 445
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A A+++ + +HG R+ + NV V TALVDMYAKCG + +AR +F+ + E+ V
Sbjct: 446 TAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVT 505
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WNAMI GY HG AL+LFE+M K ++P+ +TF+ V+SACS GL + G F M
Sbjct: 506 TWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMM 565
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+Y I+PS+ HY MVDLLG +GRL+EA D IMQM VKP V+GA+L +C++H +V
Sbjct: 566 KENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNF 625
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE E+L EL P D G +V+L+NIY A+ WE V ++R M+ +G++K+ CS +E+KN
Sbjct: 626 AEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKN 685
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ H+F SG +HP+ +IYA L+ L ++KEAGYVP T + +E+D K ++ HSE+
Sbjct: 686 EVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYVPDTNLIL-GLEDDVKEQLLSSHSEK 744
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAI+FGL+NT GT + + KNL++C DCH A K+IS +T REI VRD+ R+HHFK+G CS
Sbjct: 745 LAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIIVRDMQRFHHFKNGACS 804
Query: 508 CGDYW 512
CGDYW
Sbjct: 805 CGDYW 809
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 186/372 (50%), Gaps = 39/372 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF T L ++Y+ C +H A ++FDR+P+R+L WN ++ Y+ NG +A+E+
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ E L P T L A SAL I G+ IH +R +++ V + AL+DMYAKC
Sbjct: 225 NLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKC 284
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ AR +FD +LER+ P++ +++ +
Sbjct: 285 GSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGAL 344
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A AD+ L +GR +H S + NV V +L+ MY KC V A ++F +L+ + +V
Sbjct: 345 HACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIV 404
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNAMI G+A +G +AL+ F +M+ V+PD T+V V++A + + + +
Sbjct: 405 SWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVV 464
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+R+ +D +V T +VD+ G + A LI M + W A+++ HG +
Sbjct: 465 MRNC-LDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHG---I 519
Query: 328 AELALEKLIELE 339
+ ALE E++
Sbjct: 520 GKAALELFEEMQ 531
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 176/343 (51%), Gaps = 36/343 (10%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+ TKLV L+ + A ++F+ I ++ L+ +++ +A + A++ + R+ +
Sbjct: 70 LFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDD 129
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
+ P + F + LK C + + G+ IH ++++ + D+F L +MYAKC V A
Sbjct: 130 EVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEA 189
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
R+VFD++ ERD PS T+V+V+ A + +
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSAL 249
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
+ G+E+HG++ R F+ V + TALVDMYAKCG +K AR LF+ + E+ VVSWN+MI
Sbjct: 250 RLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMI 309
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
Y + + +A+ +F+KM DE V+P ++ +G L AC+ G + GR F + + +
Sbjct: 310 DAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR-FIHKLSVELEL 368
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
D +V ++ + +D A + +++ + W A++
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVS-WNAMI 410
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/547 (41%), Positives = 334/547 (61%), Gaps = 36/547 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYA-WNGPYEVAIE 59
+GF + L+++YS C CL +A ++FD++ +++ W +I AYA W+ P+E AI+
Sbjct: 166 LGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHE-AIK 224
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
L+ R+ + P+ T L AC+ +E +++H+ + + +AL+D+Y
Sbjct: 225 LFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYC 284
Query: 120 KCSCVVNARQVFDKILER----------------DPSEA-----------------TLVT 146
KC C AR +F+K+ E+ D EA T+ +
Sbjct: 285 KCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMAS 344
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ A + AL G+ LH + + + E++V + TALVDMYAKCG ++ A +F+++ EK
Sbjct: 345 LLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKD 404
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V++W A+I G AM G KAL+LF +M+ EV+PD ITFVGVL+ACS GL +EG +F
Sbjct: 405 VMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFN 464
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
SM Y I PS++HY CMVD+LG +GR+ EA DLI M + PD V LL++C++HG++
Sbjct: 465 SMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNL 524
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+AE A ++LIEL+P + G YV+LSNIY+ NWE K+R+LM++R IKK CS IEV
Sbjct: 525 VVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEV 584
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
H F+ GD SHP EIY L + R+K AGYVP V D++ EK N + HS
Sbjct: 585 GGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHS 644
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
E+LAIAFGL++T GT + + KNL++C DCH A+KFIS++ REI VRD NR+HHF G
Sbjct: 645 EKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGS 704
Query: 506 CSCGDYW 512
CSC D+W
Sbjct: 705 CSCRDFW 711
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 193/411 (46%), Gaps = 45/411 (10%)
Query: 7 PVLATKLVHLYSACDC--LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
P A+K+V + D L A +F++IP F N +IR Y AI Y +
Sbjct: 72 PFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLM 131
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
+ GL PD FTFP K+C L EG+++H + + +D ++ L++MY+ C C+
Sbjct: 132 MLQGLDPDRFTFPSLFKSCGVLC---EGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCL 188
Query: 125 VNARQVFDKILERD---------------------------------PSEATLVTVISAS 151
V+AR+VFDK++ + P+E TLV V++A
Sbjct: 189 VSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTAC 248
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
A L +++H + + + +AL+D+Y KCG +AR+LF ++ EK + WN
Sbjct: 249 ARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWN 308
Query: 212 AMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
MI G+ +AL LF +M+ V+ D +T +L AC+ G + G+ + +
Sbjct: 309 IMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGK-WLHVYIEK 367
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH-VKLAE 329
I+ V T +VD+ G ++ A + +M K D W AL+ + G +K E
Sbjct: 368 EKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEK-DVMTWTALIVGLAMCGQGLKALE 426
Query: 330 LALE-KLIELEPHDAGNYV-ILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
L E ++ E++P DA +V +L+ EG+A + GI+ SI
Sbjct: 427 LFHEMQMSEVKP-DAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSI 476
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/539 (43%), Positives = 322/539 (59%), Gaps = 40/539 (7%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ +Y L AH +F + R+L WN +I A G A+EL++ ++E G+ PD
Sbjct: 209 LIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPD 268
Query: 73 NFTFPFALKACSALSAIEEG-RRIHEDVIRNKWET-DVFVGAALIDMYAKCSCVVNARQV 130
T +L + A E G + +H V R W+ D+ G A++DMYAK S + A++V
Sbjct: 269 VLTL-VSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKV 327
Query: 131 FDKILERD----------------------------------PSEATLVTVISASADIAA 156
FD + +RD P + T V+V+ A + +
Sbjct: 328 FDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGG 387
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
L QG +H S + L+V V T L+D+YAKCG + A LFE + + WNA+I G
Sbjct: 388 LQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAG 447
Query: 217 YAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
+HGH KAL LF +M+ +E++PDH+TFV +L+ACS GL D+GR FF+ M Y I P
Sbjct: 448 LGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVP 507
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+HYTCMVD+LG +G+LDEA + I M +KPD VWGALL +C++HG+V++ ++A + L
Sbjct: 508 IAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNL 567
Query: 336 IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG 395
EL+P + G YV++SN+YA+ W+GV +R L+ + ++K+ S +EVK F SG
Sbjct: 568 FELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSG 627
Query: 396 DAS--HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
+ HP +EI L L +MK AGYVP V DVE DEK ++ HSERLAIAFG
Sbjct: 628 TQTEPHPQHEEIQRGLHDLLAKMKSAGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFG 687
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+INTP GT L I KNL++C DCH A K+ISKITEREI VRD NR+HHFKDG CSCGD+W
Sbjct: 688 IINTPPGTPLHIYKNLRVCGDCHSATKYISKITEREIIVRDANRFHHFKDGHCSCGDFW 746
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 163/359 (45%), Gaps = 42/359 (11%)
Query: 5 FHP-VLAT-KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
HP V A+ LVH Y + A+++FD +P+R++ WN ++ N A+ L
Sbjct: 98 LHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLG 157
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
R++ G+ D T L C L +H +++ ++FV ALID+Y K
Sbjct: 158 RMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLG 217
Query: 123 CVVNARQVFDKILERD---------------------------------PSEATLVTVIS 149
+ A VF + RD P TLV++ S
Sbjct: 218 MLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLAS 277
Query: 150 ASADIAALPQGRELHGFSWRHRFEL-NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A A + +H + R +++ ++ A+VDMYAK + A+ +F+ L ++ VV
Sbjct: 278 AVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVV 337
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSR-GGLFDEGRMFFE 265
SWN +ITGY +G + +A+ ++ M + ++P TFV VL A S GGL RM
Sbjct: 338 SWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHAL 397
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
S+ ++D V TC++DL G+L EA L M + G W A++ +HGH
Sbjct: 398 SIKTGLNLDVYVT--TCLIDLYAKCGKLVEAMFLFEHMP-RRSTGPWNAIIAGLGVHGH 453
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 144/354 (40%), Gaps = 55/354 (15%)
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIR-NKWETDVFVGAALIDMYAKCSCVVNA 127
L PD+FTFP ++A ++ + +H +R +VF +L+ Y + V A
Sbjct: 65 LRPDSFTFPPLVRAAPGPASAAQ---LHACALRLGLLHPNVFASGSLVHAYLRFGRVAEA 121
Query: 128 RQVFDKILERD-PS--------------------------------EATLVTVISASADI 154
+VFD++ ERD P+ TL +V+ +
Sbjct: 122 YRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVL 181
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
+H ++ +H + V AL+D+Y K G++ A +F + + +V+WN++I
Sbjct: 182 GDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSII 241
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDE-GRMFFESMVRDYH 272
+ G A++LF M + V PD +T V + SA ++ G DE G VR
Sbjct: 242 SANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCG--DELGAKSVHCYVRRRG 299
Query: 273 ID-PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGHVKLAE 329
D + MVD+ ++D A + + PD V W L+ +G LA
Sbjct: 300 WDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNL---PDRDVVSWNTLITGYMQNG---LAN 353
Query: 330 LALEKLIELEPHDA-----GNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
A+ ++ H+ G +V + Y+ + ++ L I G+ +
Sbjct: 354 EAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDV 407
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 14/220 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + T L+ LY+ C L A LF+ +P+R+ WN +I +G A+ L+
Sbjct: 402 GLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLF 461
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMYA 119
++ + + PD+ TF L ACS +++GR D+++ + ++DM
Sbjct: 462 SQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFF-DLMQTVYGIVPIAKHYTCMVDMLG 520
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL---NV 176
+ + A + F + + P A ++ A + G+ + ++ FEL NV
Sbjct: 521 RAGQLDEAFE-FIQSMPIKPDSAVWGALLGACRIHGNVEMGK----VASQNLFELDPENV 575
Query: 177 KVKTALVDMYAKCGL---VKVARNLFEQLREKRVVSWNAM 213
+ +MYAK G V R+L + ++ W++M
Sbjct: 576 GYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSM 615
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/534 (41%), Positives = 331/534 (61%), Gaps = 34/534 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+++YS + + ++F+ +P++++ +N +I YA +G YE A+ + + L PD
Sbjct: 146 LMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPD 205
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
FT L S + +G+ IH VIR ++DV++G++L+DMYAK + + ++ +VF
Sbjct: 206 AFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 265
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
+ RD P +VI A A +A L
Sbjct: 266 HLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHL 325
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G++LHG+ R F N+ + +ALVDMY+KCG ++ AR +F+++ VSW A+I G+A+
Sbjct: 326 GKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHAL 385
Query: 220 HGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
HGH +A+ LFE+MK + V+P+ + FV VL+ACS GL DE +F SM + Y ++ ++
Sbjct: 386 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELE 445
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
HY + DLLG +G+L+EA D I +MRV+P VW LL+SC +H +++LAE EK+ +
Sbjct: 446 HYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTI 505
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDAS 398
+ + G YV++ N+YA W+ +AKLR + +G++K ACSWIE+KNK H F+SGD S
Sbjct: 506 DSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRS 565
Query: 399 HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTP 458
HP+ D I LK + +M++ GYV T V HDV+ + K ++ HSERLA+AFG+INT
Sbjct: 566 HPSMDRINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTE 625
Query: 459 DGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
GT + +TKN++IC DCH+AIKFISKITEREI VRD +R+HHF G CSCGDYW
Sbjct: 626 PGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 161/349 (46%), Gaps = 36/349 (10%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
A+ ++ +Y+ LH A +F + + W +IR + + A+ + + G
Sbjct: 42 ASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGR 101
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
PD+ FP LK+C+ + + G +H ++R + D++ G AL++MY+K + + R+
Sbjct: 102 CPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRK 161
Query: 130 VFDKILERD---------------------------------PSEATLVTVISASADIAA 156
VF+ + +D P TL +V+ ++
Sbjct: 162 VFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVD 221
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
+ +G+E+HG+ R + +V + ++LVDMYAK ++ + +F L + +SWN+++ G
Sbjct: 222 VLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAG 281
Query: 217 YAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
Y +G +AL LF +M +V+P + F V+ AC+ G+ ++R
Sbjct: 282 YVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG-GFGR 340
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
++ + +VD+ G + A + +M + D W A++ LHGH
Sbjct: 341 NIFIASALVDMYSKCGNIQAARKIFDRMNLH-DEVSWTAIIMGHALHGH 388
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + +A+ LV +YS C + A ++FDR+ + W +I +A +G A+ L+
Sbjct: 337 GFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLF 396
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ G+ P+ F L ACS + ++E
Sbjct: 397 EEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 427
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/545 (41%), Positives = 329/545 (60%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF ++T L +YS C + A +FD + Q+ + WN ++ Y NG E AI ++
Sbjct: 278 GFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVF 337
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++LE G+ P T AL AC+ L +E G+ +H+ V + +D+ V +LI MY+KC
Sbjct: 338 EKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKC 397
Query: 122 SCVVNARQVFD---------------------------------KILERDPSEATLVTVI 148
V A +F+ K L P T+V+VI
Sbjct: 398 KRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVI 457
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A A+++ + +HG R + N+ V TALVDMY+KCG + +AR LF+ + ++ V+
Sbjct: 458 PALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVI 517
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WNAMI GY HG ALDLF+KMK V+P+ IT++ V+SACS GL DEG F+SM
Sbjct: 518 TWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSM 577
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+DY ++PS+ HY MVDLLG +GR+ EA D I M + P V+GA +CK+H ++++
Sbjct: 578 KQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEV 637
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E A +KL EL P + G +V+L+NIYA + W VA++RK M +G+KK+ CS +E++N
Sbjct: 638 GEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRN 697
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ H+F SG +HP IYA L+ L +K AGYVP T + DVE+D + ++ HSE+
Sbjct: 698 EVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEK 756
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGL+NT GT + + KNL++C DCH A K+IS +T REI VRD+ R+HHFK+GICS
Sbjct: 757 LAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICS 816
Query: 508 CGDYW 512
CGDYW
Sbjct: 817 CGDYW 821
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 176/355 (49%), Gaps = 36/355 (10%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+ TKLV L+S ++ A ++F+ I + L++ +++ YA N E A+ R+
Sbjct: 82 LFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYD 141
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
+ P + F + LK C + ++ G+ IH +I N + +VF +++MYAKC + +A
Sbjct: 142 DVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDA 201
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
++FD++ ERD P TLVTV+ A+AD+
Sbjct: 202 YKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADV 261
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L G+ +HG++ R F V + TAL DMY+KCG V+ AR +F+ + +K VVSWN+M+
Sbjct: 262 GLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMM 321
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
GY +G KA+ +FEKM +E + P +T + L AC+ G + G+ F V ++
Sbjct: 322 DGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGK-FVHKFVDQLNL 380
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ ++ + R+D A D+ + + W A++ +G V A
Sbjct: 381 GSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVS-WNAMILGYAQNGRVSEA 434
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 198/407 (48%), Gaps = 44/407 (10%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T +V++Y+ C + +A+++FDR+P+R+L WN +I ++ NG + A+EL R+ + G
Sbjct: 186 TGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQR 245
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD+ T L A + + + G+ IH IR + V + AL DMY+KC V AR +
Sbjct: 246 PDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLI 305
Query: 131 FD-------------------------------KILER--DPSEATLVTVISASADIAAL 157
FD K+LE DP+ T++ + A AD+ L
Sbjct: 306 FDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDL 365
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
+G+ +H F + ++ V +L+ MY+KC V +A ++F L + VSWNAMI GY
Sbjct: 366 ERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGY 425
Query: 218 AMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
A +G ++AL+ F +MK ++PD T V V+ A + + + ++R +D +
Sbjct: 426 AQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSC-LDKN 484
Query: 277 VQHYTCMVDLLGHSGRLDEA---CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
+ T +VD+ G + A D+I V W A+++ HG + A +
Sbjct: 485 IFVTTALVDMYSKCGAIHMARKLFDMISDRHVI----TWNAMIDGYGTHGLGRAALDLFD 540
Query: 334 KLIE--LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
K+ + +EP+D ++S EG+ + + D G++ S+
Sbjct: 541 KMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSM 587
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 149/326 (45%), Gaps = 26/326 (7%)
Query: 45 IRAYAWNGPYEVAIELYYRLLE----IGLVPDNFTFP---FALKACSALS---AIEEGRR 94
I ++ + P V +EL + E I LV N + F K S S +I E R
Sbjct: 43 IPSHVYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAAR 102
Query: 95 IHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA-----RQVFDKILERDPSEATLVTVIS 149
+ E I +K + + ++ YAK S + A R +D + P ++
Sbjct: 103 VFEP-IDDKLDA---LYHTMLKGYAKNSSLETALAFLCRMRYDDV---KPVVYNFTYLLK 155
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
D A L +G+E+HG + F NV T +V+MYAKC + A +F+++ E+ +VS
Sbjct: 156 VCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVS 215
Query: 210 WNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WN +I G++ +G + KAL+L +M+DE Q PD IT V VL A + GL G+ +
Sbjct: 216 WNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAI 275
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
R V T + D+ G + E LI + W ++++ +G + A
Sbjct: 276 R-AGFAKLVNISTALADMYSKCGSV-ETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKA 333
Query: 329 ELALEKLIELEPHDAGNYVILSNIYA 354
EK++E E D I+ ++A
Sbjct: 334 IAVFEKMLE-EGIDPTGVTIMEALHA 358
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/538 (40%), Positives = 337/538 (62%), Gaps = 34/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ LY+ ++ ++F+ +P+ ++ W+ +I YA + A+EL+ ++
Sbjct: 179 VGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAF 238
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
++P+ FTF L++C+++ ++ G+++H V++ + +VFV AL+D+YAKC + N+
Sbjct: 239 VLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSM 298
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
++F ++ R+ SE T +V+ A A +A
Sbjct: 299 KLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLA 358
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
A+ G ++H S + ++ +V V AL+DMYAKCG +K AR +F+ L E+ +SWNAMI+
Sbjct: 359 AMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMIS 418
Query: 216 GYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GY+MHG +AL F+ M++ E P+ +TFV +LSACS GL D G+ +F+SMV+DY I+
Sbjct: 419 GYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIE 478
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HYTCMV LLG SG LD+A LI ++ ++P+ VW ALL +C +H V L ++ ++
Sbjct: 479 PCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQ 538
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
+++++P D +V+LSNIYAR W VA +RK M ++G+KK SWIE + H F
Sbjct: 539 ILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSV 598
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD SHP+ I L+WL + ++AGYVP +V DVE+DEK + HSERLA+AFGL
Sbjct: 599 GDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGL 658
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I TP + I KNL+IC DCH AIK ISKI +R+I +RD+NR+HHF+DGICSCGDYW
Sbjct: 659 IRTPSRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 178/373 (47%), Gaps = 36/373 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + T L+ Y+ C +++A Q FD I +++ W ++ YA N ++ +++L
Sbjct: 70 LGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQL 129
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + +G P++FTF LKAC L A G+ +H V++ +E D++VG L+D+Y K
Sbjct: 130 FAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTK 189
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ +VF+++ + D P++ T +V
Sbjct: 190 FGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASV 249
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ + A I L G+++H + + NV V AL+D+YAKCG + + LF +L +
Sbjct: 250 LQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNE 309
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V+WN MI GY G KAL L++ M + +VQ +T+ VL AC+ + G
Sbjct: 310 VTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSL 369
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
++ + D V ++D+ G + A L+ M + D W A+++ +HG V
Sbjct: 370 SLKTIY-DKDVVVGNALIDMYAKCGSIKNA-RLVFDMLSERDEISWNAMISGYSMHGLVG 427
Query: 327 LAELALEKLIELE 339
A A + + E E
Sbjct: 428 EALKAFQMMQETE 440
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 157/327 (48%), Gaps = 30/327 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + ++ L+ +Y+ C L N+ +LF +P RN WN +I Y +G + A+ L
Sbjct: 272 VGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSL 331
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
Y +LE + T+ L+AC++L+A+E G +IH ++ ++ DV VG ALIDMYAK
Sbjct: 332 YKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAK 391
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQ----GRELHGFSWRHRFELNV 176
C + NAR VFD + ERD IS +A I+ G L F E V
Sbjct: 392 CGSIKNARLVFDMLSERDE--------ISWNAMISGYSMHGLVGEALKAFQMMQETEC-V 442
Query: 177 KVKTALVDMYAKC---GLVKVARNLFEQLREKRVVS-----WNAMITGYAMHGHSTKALD 228
K V + + C GL+ + +N F+ + + + + M+ GH KA+
Sbjct: 443 PNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVK 502
Query: 229 LFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ-HYTCMVDLL 287
L E++ ++P+ + +L AC D G M + +++ IDP + + + ++
Sbjct: 503 LIEEIP--LEPNVKVWRALLGACVIHNDVDLGIMSAQQILQ---IDPQDEATHVLLSNIY 557
Query: 288 GHSGRLDEACDLIMQMR---VKPDPGV 311
+ R + + M+ VK +PG+
Sbjct: 558 ARTRRWNSVASVRKFMKNKGVKKEPGL 584
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 135/305 (44%), Gaps = 35/305 (11%)
Query: 33 IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+P RN + LI+ Y + + ++L+ R+ G + F F LK ++ E
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 93 RRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD-------------- 138
+H + + E++ FVG ALID YA C V +ARQ FD I +D
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 139 -------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
P+ T V+ A + A G+ +HG + +E+++ V
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQ 238
L+D+Y K G +FE++ + V+ W+ MI+ YA S +A++LF +M+ V
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
P+ TF VL +C+ G+ V +D +V ++D+ GRLD +
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQ-VHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMK 299
Query: 299 LIMQM 303
L M++
Sbjct: 300 LFMEL 304
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 124/297 (41%), Gaps = 28/297 (9%)
Query: 136 ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
E +P T + + S + A L LH ++ E N V TAL+D YA CG V A
Sbjct: 38 ELNPFVFTTILKLLVSVECAEL--AYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSA 95
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRG 254
R F+ + K +VSW M+ YA + +L LF +M+ P+H TF GVL AC
Sbjct: 96 RQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGL 155
Query: 255 GLFDEGRMFFESMVRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV-- 311
F G+ +++ Y +D V V LL + +A D++ P V
Sbjct: 156 EAFSVGKSVHGCVLKTCYEMDLYVG-----VGLLDLYTKFGDANDVLRVFEEMPKHDVIP 210
Query: 312 WGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMID 371
W +++ + + A+E ++ +L N + A+ + A + L +
Sbjct: 211 WSFMISR---YAQSNQSREAVELFGQMR-----RAFVLPNQFTFASVLQSCASIENLQLG 262
Query: 372 RGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESV 428
K + C ++V + F+S ++YAK L+ MK +P V
Sbjct: 263 ----KQVHCHVLKVGLDGNVFVSNALM-----DVYAKCGRLDNSMKLFMELPNRNEV 310
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/581 (38%), Positives = 331/581 (56%), Gaps = 70/581 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNG-----PYEV 56
G V+A L+ +Y C+C+ +A + FDR+ +R++ W+ +I YA +G +
Sbjct: 310 GLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDE 369
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
+L R+ G+ P+ TF LKACS A+E+GR+IH ++ + +E+D + A+ +
Sbjct: 370 VFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFN 429
Query: 117 MYAKCSCV-------------------------------VNARQVFDKILERD------- 138
MYAKC + +A +VF ++ R+
Sbjct: 430 MYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLM 489
Query: 139 --------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
P T+++++ A ++AL +G+ +H + +
Sbjct: 490 IAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGL 549
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
E + V T+L+ MY+KCG V AR +F+++ + V+WNAM+ GY HG +A+DLF++
Sbjct: 550 ESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKR 609
Query: 233 M-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
M K+ V P+ ITF V+SAC R GL EGR F M D+ + P QHY CMVDLLG +G
Sbjct: 610 MLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAG 669
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSN 351
RL EA + I +M +PD VW ALL +CK H +V+LAE A ++ LEP +A YV LSN
Sbjct: 670 RLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSN 729
Query: 352 IYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKW 411
IYA+A W+ K+RK+M D+G+KK S IE+ + H F++ D +HP D I+A+L+
Sbjct: 730 IYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEM 789
Query: 412 LEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKI 471
L MKEAGY P V HDV+ +K +C HSE+LAIA+GL+ TP GT + I KNL++
Sbjct: 790 LTKEMKEAGYTPDMRFVLHDVDEVQKERALCHHSEKLAIAYGLLKTPPGTPIRIMKNLRV 849
Query: 472 CDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
C DCH A KFISKI +REI RD NR+H+FK+G CSCGD+W
Sbjct: 850 CGDCHTATKFISKIRKREIVARDANRFHYFKNGTCSCGDFW 890
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 174/385 (45%), Gaps = 72/385 (18%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+AT L+ +YS C + A ++F ++ +RN+ W +I+A A + A ELY ++L+ G
Sbjct: 216 VATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAG 275
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P+ TF L +C+ A+ GRRIH + ETDV V ALI MY KC+C+ +AR
Sbjct: 276 ISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDAR 335
Query: 129 QVFDKILERD--------------------------------------PSEATLVTVISA 150
+ FD++ +RD P++ T ++++ A
Sbjct: 336 ETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKA 395
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK----- 205
+ AL QGR++H + FE + ++TA+ +MYAKCG + A +F ++ K
Sbjct: 396 CSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAW 455
Query: 206 --------------------------RVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQ 238
VVSWN MI GYA G K +L MK E Q
Sbjct: 456 ASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQ 515
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
PD +T + +L AC + G++ V+ ++ T ++ + G + EA
Sbjct: 516 PDRVTIISILEACGALSALERGKLVHAEAVK-LGLESDTVVATSLIGMYSKCGEVTEART 574
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHG 323
+ ++ + D W A+L HG
Sbjct: 575 VFDKISNR-DTVAWNAMLAGYGQHG 598
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 197/415 (47%), Gaps = 46/415 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G L L++ YS + + Q+F R+ R++ W+ +I AYA N A +
Sbjct: 107 LGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDT 166
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+ + + P+ TF LKAC+ S +E+ R IH V + ETDV V ALI MY+K
Sbjct: 167 FERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSK 226
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + A ++F K+ ER+ P+ T V++
Sbjct: 227 CGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSL 286
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+++ AL +GR +H E +V V AL+ MY KC ++ AR F+++ ++ V
Sbjct: 287 LNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDV 346
Query: 208 VSWNAMITGYAMHGHSTK-ALD----LFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR 261
+SW+AMI GYA G+ K +LD L E+M+ E V P+ +TF+ +L ACS G ++GR
Sbjct: 347 ISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGR 406
Query: 262 MFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
+ + + D S+Q T + ++ G + EA + +M K + W +LL
Sbjct: 407 QIHAEISKVGFESDRSLQ--TAIFNMYAKCGSIYEAEQVFSKMENK-NVVAWASLLTMYI 463
Query: 321 LHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIK 375
G + AE E+ + ++ ++ YA++ + V +L M G +
Sbjct: 464 KCGDLTSAEKVFS---EMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQ 515
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 168/382 (43%), Gaps = 80/382 (20%)
Query: 52 GPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG 111
G + AI+L + + GL+ ++ T+ ++ C+ L E+G+ +H+ + D+++G
Sbjct: 57 GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLG 116
Query: 112 AALIDMYAKCSCVVNARQVFDKILERD--------------------------------- 138
+LI+ Y+K V + QVF ++ RD
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIE 176
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P+ T ++++ A + + L + RE+H E +V V TAL+ MY+KCG + +A +
Sbjct: 177 PNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEI 236
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLF 257
F++++E+ VVSW A+I A H +A +L+EKM + + P+ +TFV +L++C+
Sbjct: 237 FQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEAL 296
Query: 258 DEGRMFFESMV-RDYHIDPSVQH-----------------------------YTCMVDLL 287
+ GR + R D V + ++ M+
Sbjct: 297 NRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGY 356
Query: 288 GHSG-----RLDEACDLIMQMR---VKPDPGVWGALLNSCKLHG--------HVKLAELA 331
SG LDE L+ +MR V P+ + ++L +C +HG H +++++
Sbjct: 357 AQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVG 416
Query: 332 LEKLIELEPHDAGNYVILSNIY 353
E L+ Y +IY
Sbjct: 417 FESDRSLQTAIFNMYAKCGSIY 438
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G V+AT L+ +YS C + A +FD+I R+ WN ++ Y +G A++L
Sbjct: 547 LGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDL 606
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRI 95
+ R+L+ + P+ TF + AC ++EGR I
Sbjct: 607 FKRMLKERVPPNEITFTAVISACGRAGLVQEGREI 641
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/527 (41%), Positives = 320/527 (60%), Gaps = 34/527 (6%)
Query: 20 CDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFA 79
C + A +LF+ + R+ W ++ + NG A+E++ R+ G+ D +TF
Sbjct: 219 CKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSI 278
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI----- 134
L AC ALSA+E+G++IH +IR +++ +VFVG+AL+DMY+KC + A VF ++
Sbjct: 279 LTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNI 338
Query: 135 -------------------------LERD---PSEATLVTVISASADIAALPQGRELHGF 166
++RD P + TL +VIS+ A++A+L +G + H
Sbjct: 339 ISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCL 398
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ + V ALV +Y KCG ++ A LF+++ VSW A+++GYA G + +
Sbjct: 399 ALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKET 458
Query: 227 LDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
+DLFEKM V+PD +TF+GVLSACSR G ++GR +F SM +D+ I P HYTCM+D
Sbjct: 459 IDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMID 518
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGN 345
L SG+L EA + I QM + PD WG LL++C+L G +++ + A E L+E++P + +
Sbjct: 519 LYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPAS 578
Query: 346 YVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEI 405
YV+L +++A W VA+LR+ M DR +KK CSWI+ KNK H F + D SHP I
Sbjct: 579 YVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGI 638
Query: 406 YAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLI 465
Y KL+WL +M E GY P SV HDV + +K +M+ HSE+LAIAFGLI P + I
Sbjct: 639 YEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLIFVPQEMPIRI 698
Query: 466 TKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
KNL++C DCH A KFISKIT R+I VRD R+H F DG+CSCGD+W
Sbjct: 699 VKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGVCSCGDFW 745
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 147/352 (41%), Gaps = 81/352 (23%)
Query: 39 FLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIH-- 96
+L N L+ AY G + A R+ + P+ FT+ + LS + R +
Sbjct: 42 YLLNHLLTAYGKAGRHARA----RRVFDAMPHPNLFTYN------ALLSTLAHARLLSDM 91
Query: 97 EDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----PSEATLVTVISASA 152
E + + + D+ A+I ++ A +V+ +L+ D PS T+ T++ A++
Sbjct: 92 EALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAAS 151
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK------------------------ 188
+ G++ H R F N V + LVDMYAK
Sbjct: 152 ALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNT 211
Query: 189 -------CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPD 240
C +V+ AR LFE + ++ ++W M+TG+ +G ++AL++F +M+ + + D
Sbjct: 212 MITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAID 271
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHID-------------------------- 274
TF +L+AC ++G+ ++R + D
Sbjct: 272 QYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFR 331
Query: 275 ----PSVQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWGALLNSC 319
++ +T ++ G +G +EA + +M+ + PD G++++SC
Sbjct: 332 RMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSC 383
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 2/150 (1%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + ++ LV LY C + +AH+LFD + + W L+ YA G + I+L+
Sbjct: 403 GLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLF 462
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG-AALIDMYAK 120
++L G+ PD TF L ACS +E+GR + ++ + +ID+Y++
Sbjct: 463 EKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSR 522
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISA 150
+ A + F K + P T++SA
Sbjct: 523 SGKLKEAEE-FIKQMPMHPDAIGWGTLLSA 551
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/538 (42%), Positives = 332/538 (61%), Gaps = 34/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ +L+ LY + +A Q+F+ +P+ ++ W+ +I YA + E AIE++ R+
Sbjct: 283 VGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGL 342
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
++P+ FT L+AC++L ++ G +IH V++ + +VFV AL+DMYAKC + N+
Sbjct: 343 VLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSL 402
Query: 129 QVFDK--------------------------ILERD-------PSEATLVTVISASADIA 155
Q+F + IL +D +E T +V+ A A IA
Sbjct: 403 QLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIA 462
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL G ++H S + ++ N V AL+DMYAKCG +K AR +F+ LRE VSWNAMI+
Sbjct: 463 ALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMIS 522
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GY++HG +AL FE M + E +PD +TFVG+LSACS GL D G+ +F+SMV +Y I+
Sbjct: 523 GYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIE 582
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P +HYTCMV LLG SG LD+A L+ ++ +P VW ALL++C +H V+L ++ ++
Sbjct: 583 PCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQR 642
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
++E+EP D +V+LSNIYA A W VA +R M +GI+K SWIE + + H F
Sbjct: 643 VLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSV 702
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD SHP+ I L+WL + + GYVP SV DVE+ +K + HSERLA+A+GL
Sbjct: 703 GDTSHPDTKLINGMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQRLWVHSERLALAYGL 762
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I TP + L I KNL+IC DCH AIK ISKI +R+I +RD+NR+HHF +GICSCGDYW
Sbjct: 763 IRTPSISPLRIIKNLRICADCHAAIKLISKIVQRDIIIRDMNRFHHFHEGICSCGDYW 820
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 175/373 (46%), Gaps = 36/373 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + T L+ YS C A Q+FD I +++ W ++ Y N +E +++L
Sbjct: 174 LGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKL 233
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+ +G P+NFTF LKAC L G+ +H + + ++FVG LID+Y K
Sbjct: 234 FSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIK 293
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
V +A QVF+++ + D P++ TL ++
Sbjct: 294 SGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASL 353
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A A + L G ++H + ++NV V AL+DMYAKCG ++ + LF +
Sbjct: 354 LQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTD 413
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSWN +I GY G+ KAL LF+ M + +VQ +T+ VL AC+ + G
Sbjct: 414 VSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSL 473
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
V+ + D + ++D+ G + +A L+ M + D W A+++ +HG
Sbjct: 474 SVKTIY-DKNTVVGNALIDMYAKCGNIKDA-RLVFDMLREHDQVSWNAMISGYSVHGLYG 531
Query: 327 LAELALEKLIELE 339
A E ++E E
Sbjct: 532 EALKTFESMLETE 544
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 145/324 (44%), Gaps = 35/324 (10%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L++ Y D L +A +LFD +P RN + LI+ Y+ + AI L+ RL G +
Sbjct: 85 LLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELN 144
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
F F LK + + G +H V + +++D FVG ALID Y+ C ARQVFD
Sbjct: 145 PFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFD 204
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
I +D P+ T +V+ A +
Sbjct: 205 AIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNV 264
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G+ +HG +++ + + V L+D+Y K G V A +FE++ + V+ W+ MI YA
Sbjct: 265 GKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQ 324
Query: 220 HGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
S +A+++F +M+ V P+ T +L AC+ G +V+ +D +V
Sbjct: 325 SEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVK-VGLDMNVF 383
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQ 302
++D+ GR++ + L +
Sbjct: 384 VSNALMDMYAKCGRMENSLQLFSE 407
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 176/401 (43%), Gaps = 32/401 (7%)
Query: 34 PQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
P+ N +++ L+++ NG L+ +++ G D F L ++ +
Sbjct: 40 PEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAA 99
Query: 94 RIHEDVI-RNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL----ERDPSEATLVTVI 148
++ +++ RN T FV LI Y++C A +F ++ E +P + V +
Sbjct: 100 KLFDEMPDRN---TVSFV--TLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKL 154
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA+ A L G +H ++ F+ + V TAL+D Y+ CG + AR +F+ + K +V
Sbjct: 155 LVSAEWAKL--GFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMV 212
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SW M+ Y + ++L LF +M+ +P++ TF VL AC +F+ G+
Sbjct: 213 SWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCA 272
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ +++ ++DL SG +D+A + +M K D W ++ + +
Sbjct: 273 FKTSYLEELFVGVE-LIDLYIKSGDVDDALQVFEEMP-KDDVIPWSFMIAR---YAQSEQ 327
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
+E A+E + ++L N + A+ + A L +D + I C ++V
Sbjct: 328 SEEAIEMFCRMR-----RGLVLPNQFTLASLLQACASL----VDLQLGNQIHCHVVKVGL 378
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESV 428
+ F+S ++YAK +E ++ P V
Sbjct: 379 DMNVFVSNALM-----DMYAKCGRMENSLQLFSESPNCTDV 414
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/533 (41%), Positives = 323/533 (60%), Gaps = 33/533 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ +YS C L++A ++F+R+ ++ + W +I Y G + AI+L+ + G+VPD
Sbjct: 394 LLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPD 453
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+ L AC+ ++ G+ +H+ + N ET+ FV AL DMYAKC + +A VF
Sbjct: 454 VYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFS 513
Query: 133 KILERD----------------PSEA----------------TLVTVISASADIAALPQG 160
+ ++D P+EA T+ ++ A A +AAL +G
Sbjct: 514 HMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRESKPDGTTVACILPACASLAALDKG 573
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMH 220
RE+HG++ R+ + + V A+VDMY KCGL+ +AR+LF+ + K +VSW MI GY MH
Sbjct: 574 REIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMH 633
Query: 221 GHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQH 279
G+ ++A++ F +M+ ++PD ++F+ +L ACS GL DEG F M ++ I+P+++H
Sbjct: 634 GYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEH 693
Query: 280 YTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
Y CMVDLL +G L +A I M +KPD +WGALL C++H VKLAE E++ ELE
Sbjct: 694 YACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELE 753
Query: 340 PHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASH 399
P + G YV+L+NIYA A WE V KLRK + RG+KK+ CSWIE+K K + F++GD S
Sbjct: 754 PENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSK 813
Query: 400 PNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPD 459
P +I LK L +MKE GY P T + + EK +C HSE+LA+AFG++N P
Sbjct: 814 PQAKKIELLLKRLRSKMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPP 873
Query: 460 GTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
G + +TKNL++C DCH KF+SK REI +RD +R+HHFKDG CSC YW
Sbjct: 874 GKTIRVTKNLRVCGDCHEMAKFMSKSASREIILRDSSRFHHFKDGSCSCRGYW 926
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 176/350 (50%), Gaps = 37/350 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G +L KLV +Y C L +FD++ + +FLWN++I Y+ +G Y +I L+
Sbjct: 180 GVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLF 239
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++LE+G+ P+++TF LK +A++ +EEGR++H + + + + V +LI Y
Sbjct: 240 KQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVG 299
Query: 122 SCVVNARQVFDKILERDPSE---------------------------------ATLVTVI 148
V A+++FD++ +RD AT+V V
Sbjct: 300 RKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVF 359
Query: 149 SASADIAALPQGRELHGFSWR-HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
A A+I L G+ LH +S + + V+ L+DMY+KCG + A +FE++ EK V
Sbjct: 360 VACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTV 419
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSW +MITGY G S A+ LF++MK V PD +L+AC+ G G++ +
Sbjct: 420 VSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHD- 478
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
+R+ +++ + + D+ G + +A D+ M+ K D W ++
Sbjct: 479 YIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMK-KKDVISWNTMI 527
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 192/440 (43%), Gaps = 73/440 (16%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + + L+ Y + A +LFD + R++ WN +I Y NG + IE+
Sbjct: 280 LGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEI 339
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR-NKWETDVFVGAALIDMYA 119
+ ++L G+ D T AC+ + + G+ +H I+ + +V L+DMY+
Sbjct: 340 FIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYS 399
Query: 120 KCSCVVNARQVFDKILERD---------------------------------PSEATLVT 146
KC + +A +VF+++ E+ P + +
Sbjct: 400 KCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTS 459
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+++A A L G+ +H + + E N V AL DMYAKCG +K A ++F +++K
Sbjct: 460 ILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKD 519
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V+SWN MI GY + +AL LF +M+ E +PD T +L AC+ D+GR
Sbjct: 520 VISWNTMIGGYTKNSLPNEALTLFAEMQRESKPDGTTVACILPACASLAALDKGREIHGY 579
Query: 267 MVRD-YHIDPSVQH-----------------------------YTCMVDLLGHSGRLDEA 296
+R+ Y D V + +T M+ G G EA
Sbjct: 580 ALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEA 639
Query: 297 CDLIMQMR---VKPDPGVWGALLNSCKLHGHV----KLAELALEKLIELEPHDAGNYVIL 349
+ QMR ++PD + ++L +C G + K+ + ++K ++EP + +Y +
Sbjct: 640 INTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNI-MKKECQIEP-NLEHYACM 697
Query: 350 SNIYARAANWEGVAKLRKLM 369
++ AR N K K M
Sbjct: 698 VDLLARTGNLVKAHKFIKAM 717
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 34/261 (13%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER-- 137
L+ C+ +I +GRR+ + + D +G L+ MY KC + R VFDK+ E
Sbjct: 157 LQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKI 216
Query: 138 -------------------------------DPSEATLVTVISASADIAALPQGRELHGF 166
P+ T +++ A +A + +GR++HG
Sbjct: 217 FLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGL 276
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ F V +L+ Y V+ A+ LF++L ++ V+SWN+MI+GY +G +
Sbjct: 277 ICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRG 336
Query: 227 LDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
+++F KM V D T V V AC+ G G++ ++ +D V+ ++D
Sbjct: 337 IEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLD 396
Query: 286 LLGHSGRLDEACDLIMQMRVK 306
+ G L+ A + +M K
Sbjct: 397 MYSKCGDLNSAIRVFERMDEK 417
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/537 (39%), Positives = 328/537 (61%), Gaps = 33/537 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T+LV +Y C L +A + DR+P+R++ W +I Y+ + A++L+ ++L G
Sbjct: 47 LGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAG 106
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+P+ +T L +CS +I +G+++H +++ +E+ +FVG++L+DMYAK + AR
Sbjct: 107 CIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEAR 166
Query: 129 QVFDKILERDP---------------------------------SEATLVTVISASADIA 155
+VFD + ERD + T T+++A + +A
Sbjct: 167 RVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLA 226
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+L G+++H R V ++ +L+DMY+KCG + +R +F+ + E+ VVSWNAM+
Sbjct: 227 SLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLM 286
Query: 216 GYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
GY HG + + LF+ + EV+PD +T + VLS CS GGL DEG F+++V++
Sbjct: 287 GYGRHGLGHEVISLFKDLHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALL 346
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
HY C++DLLG SGRL++A +LI M + P +WG+LL +C++H +V + EL +KL
Sbjct: 347 HTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKL 406
Query: 336 IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG 395
+E+EP +AGNYVILSNIYA A W+ V K+RKLM+++ + K SWI + H F S
Sbjct: 407 LEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSS 466
Query: 396 DASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLI 455
+ HP+ +I AK+K + +K AG+VP V HDV++++K M+ HSE+LAI FGL+
Sbjct: 467 ERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLM 526
Query: 456 NTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
NTP G + + KNL+IC DCH KF+SK+ EREI++RD NR+H G C+CGDYW
Sbjct: 527 NTPPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 583
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 145/316 (45%), Gaps = 66/316 (20%)
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL 135
+ A+ AC A+ EGR++H +I ++ VF+G L+ MY +C + +AR V D++
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 136 ERD---------------------------------PSEATLVTVISASADIAALPQGRE 162
ER P+E TL TV+++ + ++ QG++
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
+H + FE ++ V ++L+DMYAK ++ AR +F+ L E+ VVS A+I+GYA G
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 192
Query: 223 STKALDLFEKMKDE-VQPDHITFVGVLSACS--------------------------RGG 255
+ALDLF ++ E +Q +H+TF +++A S +
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 252
Query: 256 LFDE----GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI--MQMRVKPDP 309
L D G++ + V D ++ SV + M+ G G E L + VKPD
Sbjct: 253 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKEVKPDS 312
Query: 310 GVWGALLNSCKLHGHV 325
A+L+ C G V
Sbjct: 313 VTLLAVLSGCSHGGLV 328
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 222/535 (41%), Positives = 335/535 (62%), Gaps = 35/535 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV-P 71
L+ LY+ + A Q F+ +P+ +L W+++I YA + + A+EL+ R+ + +V P
Sbjct: 246 LLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVP 305
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
+NFTF L+AC++L + G +IH V++ +++VFV AL+D+YAKC + N+ ++F
Sbjct: 306 NNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLF 365
Query: 132 DKILERD---------------------------------PSEATLVTVISASADIAALP 158
E++ P+E T +V+ ASA + AL
Sbjct: 366 TGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALE 425
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
GR++H + + + + V +L+DMYAKCG + AR F+++ ++ VSWNA+I GY+
Sbjct: 426 PGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYS 485
Query: 219 MHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
+HG +AL+LF+ M+ +P+ +TFVGVLSACS GL D+GR F+SM++DY I+P +
Sbjct: 486 IHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCI 545
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+HYTCMV LLG SG+ DEA LI ++ +P VW ALL +C +H ++ L ++ ++++E
Sbjct: 546 EHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLE 605
Query: 338 LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDA 397
+EP D +V+LSN+YA A W+ VA +RK M + +KK SW+E + H F GD
Sbjct: 606 MEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDT 665
Query: 398 SHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINT 457
SHPN I+A L+WL + ++AGYVP V DVE+DEK ++ HSERLA+AFGLI
Sbjct: 666 SHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDVEDDEKERLLWMHSERLALAFGLIQI 725
Query: 458 PDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
P G + I KNL+IC DCH IK +SKI +REI +RD+NR+HHF+ G+CSCGDYW
Sbjct: 726 PSGCSIRIIKNLRICVDCHAVIKLVSKIVQREIVIRDINRFHHFRQGVCSCGDYW 780
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 197/417 (47%), Gaps = 43/417 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + T L+ YS C + A Q+FD I +++ W ++ YA N +E ++ L
Sbjct: 133 LGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLL 192
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ +G P+NFT ALK+C+ L A + G+ +H ++ ++ D++VG AL+++Y K
Sbjct: 193 FCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTK 252
Query: 121 CSCVVNARQVFDKILERD----------------------------------PSEATLVT 146
+ A+Q F+++ + D P+ T +
Sbjct: 253 SGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFAS 312
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V+ A A + L G ++H + + NV V AL+D+YAKCG ++ + LF EK
Sbjct: 313 VLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKN 372
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V+WN +I GY G KAL+LF M ++QP +T+ VL A + + GR
Sbjct: 373 EVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHS 432
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
++ + SV + ++D+ GR+D+A L K D W AL+ +HG +
Sbjct: 433 LTIKTMYNKDSVVANS-LIDMYAKCGRIDDA-RLTFDKMDKQDEVSWNALICGYSIHG-L 489
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANW----EGVAKLRKLMIDRGIKKSI 378
+ L L +++ + + N + + + +N +G A + ++ D GI+ I
Sbjct: 490 GMEALNLFDMMQ-QSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCI 545
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 145/322 (45%), Gaps = 36/322 (11%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L++ Y L +A +LFD +P N + L + ++ + ++ A L RL G +
Sbjct: 44 LLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVN 103
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
F F LK ++ + +H V + + D FVG ALID Y+ C V ARQVFD
Sbjct: 104 QFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFD 163
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
I +D P+ T+ + + + A
Sbjct: 164 GIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKV 223
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G+ +HG + + ++ ++ V AL+++Y K G + A+ FE++ + ++ W+ MI+ YA
Sbjct: 224 GKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQ 283
Query: 220 HGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
S +AL+LF +M+ V P++ TF VL AC+ L + G S V +D +V
Sbjct: 284 SDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQ-IHSCVLKVGLDSNV 342
Query: 278 QHYTCMVDLLGHSGRLDEACDL 299
++D+ G ++ + L
Sbjct: 343 FVSNALMDVYAKCGEIENSVKL 364
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/544 (42%), Positives = 332/544 (61%), Gaps = 34/544 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+ +Y C A +F + + + WN +I A NG E A +
Sbjct: 276 GFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATF 335
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++L+ G VP T L AC+ L +E G +H+ + + K +++V V +LI MY+KC
Sbjct: 336 LKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKC 395
Query: 122 SCVVNARQVFDKILERDPS---------------EA-----------------TLVTVIS 149
V A +F+ + + + + EA TLV VI+
Sbjct: 396 KRVDIAASIFNNLEKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVIT 455
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A AD + Q + +HG + R + NV V TALVDMYAKCG +K AR LF+ ++E+ V++
Sbjct: 456 ALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVIT 515
Query: 210 WNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WNAMI GY HG + LDLF +M K V+P+ ITF+ V+SACS G +EG + F+SM
Sbjct: 516 WNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQ 575
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
DY+++P++ HY+ MVDLLG +G+LD+A + I +M +KP V GA+L +CK+H +V+L
Sbjct: 576 EDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELG 635
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
E A +KL +L+P + G +V+L+NIYA + W+ VAK+R M D+G+ K+ CSW+E++N+
Sbjct: 636 EKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNE 695
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
H F SG +HP +IYA L+ L +K AGYVP +S+ HDVE D K ++ HSERL
Sbjct: 696 IHTFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPDPDSI-HDVEEDVKKQLLSSHSERL 754
Query: 449 AIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
AIAFGL+NT GT L I KNL++C DCH K+IS +T REI VRD+ R+HHFK+G CSC
Sbjct: 755 AIAFGLLNTSPGTTLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSC 814
Query: 509 GDYW 512
GDYW
Sbjct: 815 GDYW 818
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 181/363 (49%), Gaps = 41/363 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + TK++ L+ A ++F+ + + L++++++ YA N A+ +
Sbjct: 74 GFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFF 133
Query: 62 YRLL--EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
R++ E+ LV ++ L+ C +++GR IH +I N +E+++FV A++ +YA
Sbjct: 134 LRMMCDEVRLVVGDYAC--LLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYA 191
Query: 120 KCSCVVNARQVFDKILERD---------------------------------PSEATLVT 146
KC + NA ++F+++ +D P TLV+
Sbjct: 192 KCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVS 251
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ A AD+ AL GR +HG+++R FE V V AL+DMY KCG ++AR +F+ +R K
Sbjct: 252 ILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKT 311
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFE 265
VVSWN MI G A +G S +A F KM DE + P +T +GVL AC+ G + G F
Sbjct: 312 VVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERG-WFVH 370
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
++ +D +V ++ + R+D A + + + W A++ +G V
Sbjct: 371 KLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNL--EKTNVTWNAMILGYAQNGCV 428
Query: 326 KLA 328
K A
Sbjct: 429 KEA 431
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 3/182 (1%)
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
L +GRE+HG + FE N+ V TA++ +YAKC + A +FE+++ K +VSW ++ G
Sbjct: 161 LKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAG 220
Query: 217 YAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
YA +GH+ +AL L +M++ Q PD +T V +L A + GR R +
Sbjct: 221 YAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRS-GFES 279
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
V ++D+ G A + MR K W +++ C +G + A K+
Sbjct: 280 LVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVS-WNTMIDGCAQNGESEEAFATFLKM 338
Query: 336 IE 337
++
Sbjct: 339 LD 340
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/521 (41%), Positives = 320/521 (61%), Gaps = 39/521 (7%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+ ++F+ +P+++L WN +I A NG YE + + + L PD+FT L +
Sbjct: 191 SVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIA 250
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------ 138
I G+ IH IR + D++V ++LIDMYAKC+ V ++ +VF + ERD
Sbjct: 251 ENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNS 310
Query: 139 ---------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHR 171
P + +++ A A + L G++LHG+ R+
Sbjct: 311 IIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNG 370
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
F+ N+ + ++LVDMYAKCG ++ A+ +F+++R + +VSW AMI G A+HG + A++LFE
Sbjct: 371 FDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFE 430
Query: 232 KMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
+M+ E VL+ACS GGL DE +F SM RD+ I P V+HY + DLLG +G
Sbjct: 431 QMETE------GIKAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAG 484
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSN 351
RL+EA D I M + P +W LL++C++H ++ +AE +++E++P++ G Y++L+N
Sbjct: 485 RLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILEVDPNNTGAYILLAN 544
Query: 352 IYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKW 411
IY+ A W+ AK R M GI+K+ ACSWIEVKNK +AF++GD SHP ++I ++
Sbjct: 545 IYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEV 604
Query: 412 LEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKI 471
L M++ GYVP T V HDVE ++K ++C HSERLAI FG+INTP G + +TKNL++
Sbjct: 605 LVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRV 664
Query: 472 CDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
C DCH A KFISKI REI VRD +R+HHFK+G CSCGDYW
Sbjct: 665 CTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 705
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 136/316 (43%), Gaps = 53/316 (16%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFT 75
+YS + LH++ +LF+ I W +IR Y +G ++ + +L GL PD+
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV-------VNAR 128
FP LK+C+ L + G +H +IR + D++ G AL++MY+K + + A
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168
Query: 129 QVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
+VFD++ ER S T V+V+S +
Sbjct: 169 EVFDEMTERTRSVRT-VSVLSEDS------------------------------------ 191
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGV 247
R +FE + EK +VSWN +I G A +G + L + +M ++PD T V
Sbjct: 192 ------VRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSV 245
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
L + G+ +R +D + + ++D+ R+ ++C + + +
Sbjct: 246 LPLIAENVDISRGKEIHGCSIRQ-GLDADIYVASSLIDMYAKCTRVADSCR-VFTLLTER 303
Query: 308 DPGVWGALLNSCKLHG 323
D W +++ C +G
Sbjct: 304 DGISWNSIIAGCVQNG 319
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + +A+ LV +Y+ C + A Q+FDR+ R++ W +I A +G AIEL+
Sbjct: 370 GFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELF 429
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN 102
++ G+ L ACS ++E + + R+
Sbjct: 430 EQMETEGI-------KAVLTACSHGGLVDEAWKYFNSMTRD 463
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/547 (42%), Positives = 336/547 (61%), Gaps = 40/547 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRI-PQRNLFLWNVLIRAYAWNGPYEVAIEL 60
G F + T L+ YS C + +A +LF + +N+ W +I Y NG + A+ L
Sbjct: 324 GSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNL 383
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ G+ P++FT+ L A +A+S +IH V++ +E VG AL D Y+K
Sbjct: 384 FCQMRREGVRPNHFTYSTILTANAAVSP----SQIHALVVKTNYENSPSVGTALSDSYSK 439
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
A ++F+ I E+D P+E T +V
Sbjct: 440 IGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSV 499
Query: 148 ISA-SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++A +A A++ QG++ H S + F + V +ALV MYAK G ++ A +F++ ++
Sbjct: 500 LNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRD 559
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+VSWN+MI+GYA HG K+L +FE+M+ + ++ D ITF+GV+SAC+ GL +EG+ +F+
Sbjct: 560 LVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFD 619
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
MV+DYHI P+++HY+CMVDL +G L++A DLI +M +W LL +C++H +V
Sbjct: 620 LMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNV 679
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+L ELA EKLI L+P D+ YV+LSNIYA A NW+ AK+RKLM + +KK SWIEV
Sbjct: 680 QLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEV 739
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
KNK +F++GD SHP D IY KL+ L R+K+AGY P T+ V HDVE + K ++ HS
Sbjct: 740 KNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHS 799
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
ERLAIAFGLI TP GT + I KNL++C DCH IK ISKI R+I VRD NR+HHFK G
Sbjct: 800 ERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGS 859
Query: 506 CSCGDYW 512
CSCGDYW
Sbjct: 860 CSCGDYW 866
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 197/417 (47%), Gaps = 43/417 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + T LV +Y + + + ++FD + +N+ W L+ Y NG E A++L+
Sbjct: 122 GFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLF 181
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ G+ P+ FTF L +A A+E+G ++H VI++ ++ +FVG ++++MY+K
Sbjct: 182 SQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKS 241
Query: 122 SCVVNARQVFDKILERDP---------------------------------SEATLVTVI 148
V +A+ VFD + R+ ++ TVI
Sbjct: 242 LMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVI 301
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE-KRV 207
A+I + ++LH ++ + ++ +KTAL+ Y+KC + A LF + + V
Sbjct: 302 KLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNV 361
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSW A+I+GY +G + +A++LF +M+ E V+P+H T+ +L+A ++
Sbjct: 362 VSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTA---NAAVSPSQIHALV 418
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+ +Y PSV T + D G +EA I ++ + D W A+L+ G ++
Sbjct: 419 VKTNYENSPSVG--TALSDSYSKIGDANEAAK-IFELIDEKDIVAWSAMLSGYAQMGDIE 475
Query: 327 LAELALEKLIE--LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
A +L + +EP++ +L+ A A+ E + I G ++ S
Sbjct: 476 GAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVS 532
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 187/460 (40%), Gaps = 93/460 (20%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
+ QLFD PQ+ L N L+ ++ N + A+ L+ L G D + LK C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
L G+++H I+ + DV VG +L+DMY K V + +VFD++ ++
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 139 --------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
P+ T V+ A A+ +G ++H +
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
+ + V ++V+MY+K +V A+ +F+ + + VSWN+MI G+ +G +A +LF +
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284
Query: 233 MKDE-VQPDHITFVGVLSACS-----------------RGGLFD----EGRMFFESMVRD 270
M+ E V+ F V+ C+ G FD M S +
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344
Query: 271 ----------YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWGALLN 317
H +V +T ++ +GR D A +L QMR V+P+ + +L
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILT 404
Query: 318 SCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKS 377
+ ++ L ++ E P LS+ Y++ + AK+ +L+ ++ I
Sbjct: 405 ANAAVSPSQIHALVVKTNYENSPSVG---TALSDSYSKIGDANEAAKIFELIDEKDI--- 458
Query: 378 IACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK 417
+W A LSG YA++ +EG +K
Sbjct: 459 --VAW-------SAMLSG----------YAQMGDIEGAVK 479
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/537 (39%), Positives = 328/537 (61%), Gaps = 33/537 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T+LV +Y C L +A + DR+P+R++ W +I Y+ + A++L+ ++L G
Sbjct: 79 LGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAG 138
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+P+ +T L +CS +I +G+++H +++ +E+ +FVG++L+DMYAK + AR
Sbjct: 139 CIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEAR 198
Query: 129 QVFDKILERDP---------------------------------SEATLVTVISASADIA 155
+VFD + ERD + T T+++A + +A
Sbjct: 199 RVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLA 258
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+L G+++H R V ++ +L+DMY+KCG + +R +F+ + E+ VVSWNAM+
Sbjct: 259 SLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLM 318
Query: 216 GYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
GY HG + + LF+ + EV+PD +T + VLS CS GGL DEG F+++V++
Sbjct: 319 GYGRHGLGHEVISLFKDLHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALL 378
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
HY C++DLLG SGRL++A +LI M + P +WG+LL +C++H +V + EL +KL
Sbjct: 379 HTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKL 438
Query: 336 IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG 395
+E+EP +AGNYVILSNIYA A W+ V K+RKLM+++ + K SWI + H F S
Sbjct: 439 LEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSS 498
Query: 396 DASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLI 455
+ HP+ +I AK+K + +K AG+VP V HDV++++K M+ HSE+LAI FGL+
Sbjct: 499 ERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLM 558
Query: 456 NTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
NTP G + + KNL+IC DCH KF+SK+ EREI++RD NR+H G C+CGDYW
Sbjct: 559 NTPPGLTIRVMKNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 615
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 145/316 (45%), Gaps = 66/316 (20%)
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL 135
+ A+ AC A+ EGR++H +I ++ VF+G L+ MY +C + +AR V D++
Sbjct: 45 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 104
Query: 136 ERD---------------------------------PSEATLVTVISASADIAALPQGRE 162
ER P+E TL TV+++ + ++ QG++
Sbjct: 105 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 164
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
+H + FE ++ V ++L+DMYAK ++ AR +F+ L E+ VVS A+I+GYA G
Sbjct: 165 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 224
Query: 223 STKALDLFEKMKDE-VQPDHITFVGVLSACS--------------------------RGG 255
+ALDLF ++ E +Q +H+TF +++A S +
Sbjct: 225 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 284
Query: 256 LFDE----GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI--MQMRVKPDP 309
L D G++ + V D ++ SV + M+ G G E L + VKPD
Sbjct: 285 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKEVKPDS 344
Query: 310 GVWGALLNSCKLHGHV 325
A+L+ C G V
Sbjct: 345 VTLLAVLSGCSHGGLV 360
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/537 (42%), Positives = 324/537 (60%), Gaps = 35/537 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y+ CL +A +LF+ IP R+ WN +I YA +G +E A+ + + +
Sbjct: 202 TALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVA 261
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
P+ T L AC+ ++E G + + + +++ + ALIDMY+KC + AR +
Sbjct: 262 PNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDL 321
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F+ I E+D P++ T V+++ A A + AL
Sbjct: 322 FEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGAL 381
Query: 158 PQGRELHGFSWRHRFEL-NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
G+ +H + + L N + T+L+DMYAKCG ++ A+ +F ++ K + SWNAMI+G
Sbjct: 382 DLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISG 441
Query: 217 YAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
AMHGH+ AL+LF +M+DE +PD ITFVGVLSACS GL + GR F SMV DY I P
Sbjct: 442 LAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISP 501
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+QHY CM+DLLG +G DEA L+ M +KPD +WG+LL +C++HG+V+L E A + L
Sbjct: 502 KLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHL 561
Query: 336 IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG 395
ELEP + G YV+LSNIYA A W+ VA++R + D+G+KK CS IEV + H FL G
Sbjct: 562 FELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVG 621
Query: 396 DASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLI 455
D H +IY L ++ +++AG+VP T V +D++ + K + HSE+LAIAFGLI
Sbjct: 622 DKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLI 681
Query: 456 NTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+T T + I KNL++C +CH AIK ISKI REI RD NR+HHFKDG CSC DYW
Sbjct: 682 STKPETTIRIVKNLRVCGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 192/389 (49%), Gaps = 68/389 (17%)
Query: 29 LFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSA 88
LF+ I Q N F+WN +IR + + AI+ Y R+L G+ P+++TFPF LK+C+ + A
Sbjct: 88 LFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGA 147
Query: 89 IEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC--------------------------- 121
+EG++IH V++ E+D FV +LI+MYA+
Sbjct: 148 TQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITG 207
Query: 122 ----SCVVNARQVFDKILERD---------------------------------PSEATL 144
C+ +AR++F++I RD P+E+T+
Sbjct: 208 YTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTM 267
Query: 145 VTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE 204
VTV+SA A +L G + + H N+++ AL+DMY+KCG + AR+LFE + E
Sbjct: 268 VTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICE 327
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMF 263
K ++SWN MI GY+ +AL LF KM+ V+P+ +TFV +L AC+ G D G+
Sbjct: 328 KDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWI 387
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+ + + + +T ++D+ G ++ A + M+ K G W A+++ +HG
Sbjct: 388 HAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPK-SLGSWNAMISGLAMHG 446
Query: 324 HVKLAELALEKLIE--LEPHDAGNYVILS 350
H +A ++ + EP D +LS
Sbjct: 447 HANMALELFRQMRDEGFEPDDITFVGVLS 475
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 140/311 (45%), Gaps = 12/311 (3%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G G + L L+ +YS C L A LF+ I ++++ WNV+I Y+ Y+ A+ L+
Sbjct: 294 GLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALF 353
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWE-TDVFVGAALIDMYAK 120
++ + + P++ TF L AC+ L A++ G+ IH + + T+ + +LIDMYAK
Sbjct: 354 RKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAK 413
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
C + A+QVF + + S + +IS A EL FE +
Sbjct: 414 CGNIEAAKQVFAGM--KPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFV 471
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKRVVS-----WNAMITGYAMHGHSTKALDLFEKMKD 235
++ + GLV++ R F + E +S + MI G +A L + M
Sbjct: 472 GVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNM-- 529
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
E++PD + +L AC G + G + + +P Y + ++ +GR D+
Sbjct: 530 EMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGA--YVLLSNIYATAGRWDD 587
Query: 296 ACDLIMQMRVK 306
+ ++ K
Sbjct: 588 VARIRTKLNDK 598
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 8/173 (4%)
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVL 248
G + A LFE + + WN MI G ++ A+D + +M V+P+ TF +L
Sbjct: 80 GNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLL 139
Query: 249 SACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
+C++ G EG+ +++ DP V +T ++++ +G L A +L+
Sbjct: 140 KSCAKVGATQEGKQIHGHVLKLGLESDPFV--HTSLINMYAQNGELGYA-ELVFSKSSLR 196
Query: 308 DPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
D + AL+ L G + A E E+ DA ++ + YA++ +E
Sbjct: 197 DAVSFTALITGYTLRGCLDDARRLFE---EIPVRDAVSWNAMIAGYAQSGRFE 246
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/541 (42%), Positives = 334/541 (61%), Gaps = 37/541 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ +V++YS + +A +FD + RN WN +I + NG A EL+YR+ G
Sbjct: 230 VGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEG 289
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ F +K C+ + + +++H VI+N + D+ + AL+ Y+KCS + +A
Sbjct: 290 VKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAF 349
Query: 129 QVF-------------------------DKILER----------DPSEATLVTVISA-SA 152
++F D+ + +P+E T +V++A +A
Sbjct: 350 KLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAA 409
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
A++ QG++ H S + F + V +ALV MYAK G ++ A +F++ ++ +VSWN+
Sbjct: 410 PTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNS 469
Query: 213 MITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
MI+GYA HG K+L +FE+M+ + ++ D ITF+GV+SAC+ GL +EG+ +F+ MV+DY
Sbjct: 470 MISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDY 529
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
HI P+++HY+CMVDL +G L++A DLI +M +W LL +C++H +V+L ELA
Sbjct: 530 HIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELA 589
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHA 391
EKLI L+P D+ YV+LSNIYA A NW+ AK+RKLM + +KK SWIEVKNK +
Sbjct: 590 AEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFS 649
Query: 392 FLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIA 451
F++GD SHP D IY KL+ L R+K+AGY P T+ V HDVE + K ++ HSERLAIA
Sbjct: 650 FMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIA 709
Query: 452 FGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
FGLI TP GT + I KNL++C DCH IK ISKI R+I VRD NR+HHFK G CSCGDY
Sbjct: 710 FGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDY 769
Query: 512 W 512
W
Sbjct: 770 W 770
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 187/379 (49%), Gaps = 43/379 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + T LV +Y + + + ++FD + +N+ W L+ Y NG E A++L+
Sbjct: 122 GFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLF 181
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ G+ P+ FTF L +A A+E+G ++H VI++ ++ +FVG ++++MY+K
Sbjct: 182 SQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKS 241
Query: 122 SCVVNARQVFDKILERDP---------------------------------SEATLVTVI 148
V +A+ VFD + R+ ++ TVI
Sbjct: 242 LMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVI 301
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE-KRV 207
A+I + ++LH ++ + ++ +KTAL+ Y+KC + A LF + + V
Sbjct: 302 KLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNV 361
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSR-GGLFDEGRMFF 264
VSW A+I+GY +G + +A++LF +M+ E V+P+ TF VL+AC+ ++G+ F
Sbjct: 362 VSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFH 421
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG- 323
++ ++ + +V + G ++ A + + + +V D W ++++ HG
Sbjct: 422 SCSIKS-GFSNALCVSSALVTMYAKRGNIESANE-VFKRQVDRDLVSWNSMISGYAQHGC 479
Query: 324 ---HVKLAELALEKLIELE 339
+K+ E K +EL+
Sbjct: 480 GKKSLKIFEEMRSKNLELD 498
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 184/449 (40%), Gaps = 91/449 (20%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
+ QLFD PQ+ L N L+ ++ N + A+ L+ L G D + LK C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
L G+++H I+ + DV VG +L+DMY K V + +VFD++ ++
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 139 --------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
P+ T V+ A A+ +G ++H +
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
+ + V ++V+MY+K +V A+ +F+ + + VSWN+MI G+ +G +A +LF +
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284
Query: 233 MKDE-VQPDHITFVGVLSACS-----------------RGGLFD----EGRMFFESMVRD 270
M+ E V+ F V+ C+ G FD M S +
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344
Query: 271 ----------YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR----VKPDPGVWGALL 316
H +V +T ++ +GR D A +L QMR V+P+ + ++L
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVL 404
Query: 317 NSCKLHGHVKLAELALEKLIELEPHDAG--NYVILSN----IYARAANWEGVAKLRKLMI 370
N+C A + K +G N + +S+ +YA+ N E ++ K +
Sbjct: 405 NACA----APTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQV 460
Query: 371 DRGIKKSIACSWIEVKNKAHAFLSGDASH 399
DR + SW ++ +SG A H
Sbjct: 461 DRDL-----VSW-------NSMISGYAQH 477
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF +++ LV +Y+ + +A+++F R R+L WN +I YA +G + +++++
Sbjct: 428 GFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIF 487
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG-AALIDMYAK 120
+ L D TF + AC+ + EG+R + ++++ + ++D+Y++
Sbjct: 488 EEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSR 547
Query: 121 CSCVVNARQVFDKI 134
+ A + +K+
Sbjct: 548 AGMLEKAMDLINKM 561
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/527 (42%), Positives = 320/527 (60%), Gaps = 34/527 (6%)
Query: 20 CDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFA 79
C + A QLFD +P+++ W +I NG ++ A++ + + G D FTF
Sbjct: 217 CRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSV 276
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
L AC A++EG++IH +IR ++ ++FVG+AL+DMY KC V A VF K+ ++
Sbjct: 277 LTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNV 336
Query: 139 --------------------------------PSEATLVTVISASADIAALPQGRELHGF 166
P + TL +VIS+ A++A+L +G + HG
Sbjct: 337 ISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQ 396
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ V V AL+ +Y KCG ++ A LF +++ + VSW A+++GYA G + +
Sbjct: 397 ALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANET 456
Query: 227 LDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
+ LFE M + PD +TFVGVLSACSR GL ++G +FE MV+++ I P HYTCM+D
Sbjct: 457 ISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMID 516
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGN 345
LL +GRL+EA + I QM PD W LL+SC+L+G++++ + A E L +LEP + +
Sbjct: 517 LLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPAS 576
Query: 346 YVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEI 405
Y++LS+IYA W+ VAKLRK M + G+KK SWI+ KNK H F + D S P D+I
Sbjct: 577 YILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQI 636
Query: 406 YAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLI 465
YAKL+ L +M E GYVP V HDVE EK M+ HSE+LAIAFGL+ PDG ++ +
Sbjct: 637 YAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIKMLNHHSEKLAIAFGLLFIPDGLQIRV 696
Query: 466 TKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
KNL++C DCH A K+IS+IT+REI VRD R+H FKDG+CSCGD+W
Sbjct: 697 VKNLRVCGDCHNATKYISRITQREILVRDAVRFHLFKDGVCSCGDFW 743
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 173/371 (46%), Gaps = 68/371 (18%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ YS L + ++FD +P ++ WN L+ YA NG ++ +Y +L+ G V
Sbjct: 77 LLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNL 136
Query: 73 N-FTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK----------- 120
N TF L S ++ GR+IH + + +++ +FVG+ L+DMYAK
Sbjct: 137 NRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIF 196
Query: 121 --------------------CSCVVNARQVFDKILERDP-SEATLVT------------- 146
C +V A Q+FD + E+D S T++T
Sbjct: 197 EEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVD 256
Query: 147 -------------------VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYA 187
V++A AL +G+++H + R ++ N+ V +AL+DMY
Sbjct: 257 KFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYC 316
Query: 188 KCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVG 246
KC VK A +F ++R K V+SW AM+ GY +G+S +A+ +F M ++E+ PD T
Sbjct: 317 KCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGS 376
Query: 247 VLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK 306
V+S+C+ +EG F + I V ++ L G G L+ A L +M+++
Sbjct: 377 VISSCANLASLEEGAQFHGQALASGLI-CFVTVSNALITLYGKCGSLEHAHQLFHEMKIR 435
Query: 307 PDPGVWGALLN 317
D W AL++
Sbjct: 436 -DEVSWTALVS 445
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 153/335 (45%), Gaps = 53/335 (15%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L++ Y L NA +FD IPQ NLF WN L+ AY
Sbjct: 42 LYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAY-------------------- 81
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
S L +++ +R+ + + + DV +L+ YA + +
Sbjct: 82 ---------------SKLGYLQDMQRVFDSMPNH----DVVSWNSLLSGYAGNGLISESV 122
Query: 129 QVFDKILER---DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
+V++ +L+ + + T T++ S++ + GR++HG ++ ++ + V + LVDM
Sbjct: 123 RVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDM 182
Query: 186 YAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFV 245
YAK G + A +FE++ EK +V +N MITG +A LF+ M ++ D I++
Sbjct: 183 YAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEK---DSISWT 239
Query: 246 GVLSACSRGGLFDEGRMFFESM-VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL---IM 301
+++ ++ GLF E F+ M + + +D + ++ G LDE + I+
Sbjct: 240 TIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFT--FGSVLTACGGFLALDEGKQIHAYII 297
Query: 302 QMRVKPDPGVWGALLNS-CKLHGHVKLAELALEKL 335
+ + + V ALL+ CK +VK AE K+
Sbjct: 298 RTDYQDNIFVGSALLDMYCKCR-NVKYAEAVFRKM 331
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/543 (39%), Positives = 330/543 (60%), Gaps = 37/543 (6%)
Query: 7 PV-LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
PV L+T+L+ LY+ C+CL A +FD + +RN+ W +I Y+ G A+ L+ ++L
Sbjct: 44 PVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQML 103
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
P+ FTF L +C+ S E GR+IH + + +E +FVG++L+DMYAK +
Sbjct: 104 RSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIH 163
Query: 126 NARQVFDKILERD---------------------------------PSEATLVTVISASA 152
AR VF+ + ERD + T ++++A +
Sbjct: 164 EARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALS 223
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+AAL G+++H R V ++ +L+DMY+KCG + AR +F + + V+SWNA
Sbjct: 224 GLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNA 283
Query: 213 MITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEG-RMFFESMVR 269
M+ GY+ HG + + LF+ M++E V+PD +TF+ VLS CS GGL D+G MF E M
Sbjct: 284 MLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNG 343
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
I+ ++HY C++DLLG +GR++EA +LI +M +P +WG+LL +C++H + + E
Sbjct: 344 GDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGE 403
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
+L+E+EP +AGNYVILSN+YA A WE V +R+LM+++ + K SWIE+
Sbjct: 404 FVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTI 463
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLA 449
H F + D SHP +E++ K++ L + KE+GYVP V +DV+ ++K ++ HSE+LA
Sbjct: 464 HTFYASDRSHPRREEVFLKVRELLVKFKESGYVPDQSCVLYDVDEEQKEKILLGHSEKLA 523
Query: 450 IAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
+AFGLI+T +G L + KNL+IC DCH KF+SK+ R++++RD NR+HH GICSCG
Sbjct: 524 LAFGLISTSEGVPLRVIKNLRICVDCHNFAKFVSKVYGRQVSIRDKNRFHHVAGGICSCG 583
Query: 510 DYW 512
DYW
Sbjct: 584 DYW 586
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 142/297 (47%), Gaps = 40/297 (13%)
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL 135
+ L C A+ EG+R+H +I+ + V++ LI +Y KC C+ AR VFD++
Sbjct: 13 YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR 72
Query: 136 ER---------------------------------DPSEATLVTVISASADIAALPQGRE 162
ER +P+E T TV+S+ + GR+
Sbjct: 73 ERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQ 132
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
+H ++ +E ++ V ++L+DMYAK G + AR +FE L E+ VVS A+I+GYA G
Sbjct: 133 IHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGL 192
Query: 223 STKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYT 281
+AL+LF +++ E + +++T+ +L+A S D G+ ++R + V
Sbjct: 193 DEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLR-CELPFYVVLQN 251
Query: 282 CMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH----VKLAELALEK 334
++D+ G L+ A + M V+ W A+L HG VKL +L E+
Sbjct: 252 SLIDMYSKCGNLNYARKIFNNMPVRTVIS-WNAMLVGYSKHGKGIEVVKLFKLMREE 307
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 5/207 (2%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
F+ VL L+ +YS C L+ A ++F+ +P R + WN ++ Y+ +G ++L+ +
Sbjct: 245 FYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLM 304
Query: 65 LEIGLV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMYAKC 121
E V PD+ TF L CS ++G + ++++ E + + +ID+ +
Sbjct: 305 REENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRA 364
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
V A ++ K + +P+ A +++ A + G E G N
Sbjct: 365 GRVEEAFELIKK-MPFEPTAAIWGSLLGACRVHSNTNIG-EFVGCRLLEIEPENAGNYVI 422
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVV 208
L ++YA G + RN+ E + EK V+
Sbjct: 423 LSNLYASAGRWEDVRNVRELMMEKAVI 449
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/540 (39%), Positives = 328/540 (60%), Gaps = 34/540 (6%)
Query: 7 PV-LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
PV LAT+L+ LY C L +A + D +P+RN+ W +I Y+ +G + A+EL+ R+L
Sbjct: 75 PVYLATRLIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRML 134
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G + FT L +C +I++ ++H V++ +E+ +FVG++L+DMY K +
Sbjct: 135 RAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQ 194
Query: 126 NARQVFDKILERDP---------------------------------SEATLVTVISASA 152
AR+VFD + ERD + T T++++ +
Sbjct: 195 EARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLS 254
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+A+L G+++HG R + ++ +L+DMY+KCG + +R +F+ + ++ +SWNA
Sbjct: 255 GLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNA 314
Query: 213 MITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
M+ GY HG + + LF M +EV+PD +T + VLS CS GGL DEG F+ +V++ +
Sbjct: 315 MLMGYGRHGIGQEVVQLFRTMTEEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQN 374
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
+ HY C++DLLG SG+L +A DLI M +P P +WG+LL +C++H +V + E+
Sbjct: 375 AVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGACRVHINVSVGEVVA 434
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
+KL+++EP +AGNYVILSNIYA A W+ V ++RKLM++ + K A SWI + H F
Sbjct: 435 QKLLDMEPGNAGNYVILSNIYAAAGMWKDVFRVRKLMLENTVTKEPAKSWIILDKVIHTF 494
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
S + HP +I AK+K + +K AG+VP V HDV++++K M+ HSE+LAI F
Sbjct: 495 HSSERFHPRKKDINAKIKEVYVDVKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITF 554
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
GL+NTP G + + KNL+IC DCH KF+SK+ REI++RD NR+H KDG C+CGDYW
Sbjct: 555 GLMNTPPGLTIQVMKNLRICVDCHNFAKFVSKVYGREISLRDKNRFHLLKDGACTCGDYW 614
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 135/313 (43%), Gaps = 66/313 (21%)
Query: 79 ALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD 138
A+ AC A+ EGR++H +++ ++ V++ LI +Y +C + +AR V D + ER+
Sbjct: 47 AITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERN 106
Query: 139 ---------------------------------PSEATLVTVISASADIAALPQGRELHG 165
+E TL TV+++ ++ Q ++H
Sbjct: 107 VVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHS 166
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
+ FE ++ V ++L+DMY K G ++ AR +F+ L E+ VS A+I+GYA G +
Sbjct: 167 LVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDE 226
Query: 226 ALDLFEKM-KDEVQPDHITFVGVLSACS--------------------------RGGLFD 258
ALDLF ++ +Q +++TF +L++ S + L D
Sbjct: 227 ALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLID 286
Query: 259 E----GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM--RVKPDPGVW 312
G++ + V D S + M+ G G E L M VKPD
Sbjct: 287 MYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEEVKPDSVTL 346
Query: 313 GALLNSCKLHGHV 325
A+L+ C G V
Sbjct: 347 LAVLSGCSHGGLV 359
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/524 (41%), Positives = 327/524 (62%), Gaps = 34/524 (6%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
+ + ++F+ +P++++ +N +I YA +G YE A+ + + L PD+FT L
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---- 138
S + +G+ IH VIR ++DV++G++L+DMYAK + + ++ +VF ++ RD
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311
Query: 139 -----------------------------PSEATLVTVISASADIAALPQGRELHGFSWR 169
P +VI A A +A L G++LHG+ R
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
F N+ + +ALVDMY+KCG +K AR +F+++ VSW A+I G+A+HGH +A+ L
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431
Query: 230 FEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
FE+MK + V+P+ + FV VL+ACS GL DE +F SM + Y ++ ++HY + DLLG
Sbjct: 432 FEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG 491
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
+G+L+EA + I +M V+P VW LL+SC +H +++LAE EK+ ++ + G YV+
Sbjct: 492 RAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVL 551
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAK 408
+ N+YA W+ +AKLR M +G++K ACSWIE+KNK H F+SGD SHP+ D+I
Sbjct: 552 MCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEF 611
Query: 409 LKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKN 468
LK + +M++ GYV T V HDV+ + K ++ HSERLA+AFG+INT GT + +TKN
Sbjct: 612 LKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKN 671
Query: 469 LKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++IC DCH+AIKFISKITEREI VRD +R+HHF G CSCGDYW
Sbjct: 672 IRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 137/311 (44%), Gaps = 41/311 (13%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
A+ ++ +Y+ LH A LF + + W +IR + + A+ + + G
Sbjct: 42 ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGR 101
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC---SCVVN 126
PD+ FP LK+C+ + + G +H ++R + D++ G AL++MYAK ++
Sbjct: 102 CPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKIS 161
Query: 127 ARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
VFD++ +R + + +VK +T ++
Sbjct: 162 VGNVFDEMPQRTSNSG------------------------------DEDVKAETCIMPF- 190
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFV 245
G+ V R +FE + K VVS+N +I GYA G AL + +M +++PD T
Sbjct: 191 ---GIDSV-RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 246
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
VL S +G+ ++R ID V + +VD+ S R++++ + ++
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRK-GIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305
Query: 306 KPDPGVWGALL 316
+ D W +L+
Sbjct: 306 R-DGISWNSLV 315
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + +A+ LV +YS C + A ++FDR+ + W +I +A +G A+ L+
Sbjct: 373 GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLF 432
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ G+ P+ F L ACS + ++E
Sbjct: 433 EEMKRQGVKPNQVAFVAVLTACSHVGLVDEA 463
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF 199
S+A + T+I I + Q ++LH R + L+ + ++ +Y L+ A LF
Sbjct: 4 SKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLF 62
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACS 252
+ L+ V++W ++I + +KAL F +M+ + PDH F VL +C+
Sbjct: 63 KTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCT 116
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/540 (41%), Positives = 327/540 (60%), Gaps = 36/540 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++ L+++YS L +A ++FD + R+L WN +I AY N A+ + +L +G
Sbjct: 285 VSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVG 344
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAKCSCVVNA 127
+ PD T LS GR +H V+R +W E D+ +G AL++MYAK + A
Sbjct: 345 MRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCA 404
Query: 128 RQVFDKILERD----------------------------------PSEATLVTVISASAD 153
R VF+++ RD P++ T V+++ A +
Sbjct: 405 RAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSH 464
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+ AL QG ++HG ++ L+V V T L+DMY KCG ++ A +LF ++ ++ V WNA+
Sbjct: 465 VGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAI 524
Query: 214 ITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I+ +HGH KAL LF+ M+ D V+ DHITFV +LSACS GL DE + F++M ++Y
Sbjct: 525 ISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYR 584
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I P+++HY CMVDL G +G L++A +L+ M ++ D +WG LL +C++HG+ +L A
Sbjct: 585 IKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFAS 644
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
++L+E++ + G YV+LSNIYA WEG K+R L DRG++K+ S + V + F
Sbjct: 645 DRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVF 704
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
+G+ SHP C EIY +L+ L +MK GYVP V DVE DEK ++ HSERLAI F
Sbjct: 705 YAGNQSHPQCAEIYEELRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVF 764
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
G+I+TP + + I KNL++C DCH A K+ISKITEREI VRD NR+HHFKDGICSCGDYW
Sbjct: 765 GIISTPPKSPIRIFKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 184/361 (50%), Gaps = 40/361 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MGF +A L+HLYS + AH++F +P R++ WN +I + NG A+ +
Sbjct: 176 MGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRV 235
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
R+ + D T L C+ + + G +H VI++ E+DVFV ALI+MY+K
Sbjct: 236 LDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSK 295
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ +A++VFD + RD P T+V++
Sbjct: 296 FGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSL 355
Query: 148 ISASADIAALPQGRELHGFSWRHR-FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
S ++ GR +HGF R R E+++ + ALV+MYAK G + AR +FEQL +
Sbjct: 356 ASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRD 415
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKD--EVQPDHITFVGVLSACSRGGLFDEGRMFF 264
V+SWN +ITGYA +G +++A+D + M++ + P+ T+V +L A S G +G
Sbjct: 416 VISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIH 475
Query: 265 ESMVRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
++++ +D V TC++D+ G GRL++A L ++ + W A+++S +HG
Sbjct: 476 GRLIKNCLFLDVFVA--TCLIDMYGKCGRLEDAMSLFYEIP-QETSVPWNAIISSLGIHG 532
Query: 324 H 324
H
Sbjct: 533 H 533
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 170/353 (48%), Gaps = 43/353 (12%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL T+LV LY+ L + F I ++N+F WN ++ AY G Y +++ LL +
Sbjct: 84 VLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSL 143
Query: 68 -GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
G+ PD +TFP LKAC +L+ +G ++H V++ +E DV+V A+LI +Y++ V
Sbjct: 144 SGVRPDFYTFPPVLKACLSLA---DGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEV 200
Query: 127 ARQVFD---------------------------KILERDPSEATLVTVISASADIAALPQ 159
A +VF ++L+R +E + ++ S+ + Q
Sbjct: 201 AHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQ 260
Query: 160 GRE------LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+ +H + +H E +V V AL++MY+K G ++ A+ +F+ + + +VSWN++
Sbjct: 261 SNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSI 320
Query: 214 ITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDE--GRMFFESMVRD 270
I Y + AL F++M ++PD +T V + S G L D GR +VR
Sbjct: 321 IAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIF--GQLSDRRIGRAVHGFVVRC 378
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
++ + +V++ G +D A + Q+ + D W L+ +G
Sbjct: 379 RWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSR-DVISWNTLITGYAQNG 430
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 7/163 (4%)
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM- 233
+V + T LV +YA G + ++ F+ ++ K + SWN+M++ Y G ++D ++
Sbjct: 82 DVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELL 141
Query: 234 -KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGR 292
V+PD TF VL AC L D +M + + D V ++ L G
Sbjct: 142 SLSGVRPDFYTFPPVLKACL--SLADGEKMHCWVLKMGFEHDVYVA--ASLIHLYSRFGA 197
Query: 293 LDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
++ A + + M V+ D G W A+++ +G+V A L+++
Sbjct: 198 VEVAHKVFVDMPVR-DVGSWNAMISGFCQNGNVAEALRVLDRM 239
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/531 (41%), Positives = 327/531 (61%), Gaps = 34/531 (6%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFT 75
L S C + AHQ+F +I N+F WN +IR YA + A+ELY ++ + PD T
Sbjct: 83 LLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHT 142
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL 135
+PF LKA + L + EG ++H IRN +E+ VFV L+ MYA C +A ++F+ +
Sbjct: 143 YPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMA 202
Query: 136 ERD----------------PSEA-----------------TLVTVISASADIAALPQGRE 162
ER+ P+EA T+V+++SA A++ AL GR
Sbjct: 203 ERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRR 262
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
H + + + N+ AL+D+YAKCG ++ A +F+++ EK VVSW ++I G A++G
Sbjct: 263 AHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGF 322
Query: 223 STKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYT 281
+AL+LF++++ + + P ITFVGVL ACS G+ DEG +F+ M +Y I P ++HY
Sbjct: 323 GKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYG 382
Query: 282 CMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPH 341
CMVDLLG +G + +A + I M ++P+ VW LL +C +HGH+ L E+A +L++LEP
Sbjct: 383 CMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPK 442
Query: 342 DAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPN 401
+G+YV+LSN+YA W V K+R+ M+ G+KK+ S +E++N+ H F+ GD SHP
Sbjct: 443 HSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQ 502
Query: 402 CDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGT 461
+EIY KL + +K GYVP +V D+E +EK + HSE++AIAF LINT G
Sbjct: 503 TEEIYVKLAEITKLLKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGI 562
Query: 462 RLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ + KNL++C DCH+AIK ISK+ +REI VRD +R+HHFKDG CSC DYW
Sbjct: 563 PIRVVKNLRVCADCHLAIKLISKVFDREIVVRDRSRFHHFKDGHCSCKDYW 613
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 21/174 (12%)
Query: 161 RELHGFSWRHRFELNVK--VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
R++H FS RH L K + + + C + A +F Q++ + +WN MI GYA
Sbjct: 57 RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYA 116
Query: 219 MHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEG--------RMFFESMVR 269
+ AL+L+ +M ++PD T+ +L A ++ EG R FES+V
Sbjct: 117 ESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLV- 175
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+ ++ H M GH+ E+ + ++ + + W +++N L+G
Sbjct: 176 --FVQNTLVH---MYAACGHA----ESAHKLFELMAERNLVTWNSVINGYALNG 220
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/557 (42%), Positives = 335/557 (60%), Gaps = 49/557 (8%)
Query: 3 FGFHPVL--ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
FGF P L ++ LV +YS C L +A LFD I RN+ W +I Y N A+ L
Sbjct: 181 FGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLL 240
Query: 61 YYRLL--EIG------LVPDNFTFPFALKACSALS--AIEEGRRIHEDVIRNKWETDVFV 110
+ L E G + D L ACS +S +I EG +H +I+ +E D+ V
Sbjct: 241 FKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEG--VHGFLIKRGFEGDLGV 298
Query: 111 GAALIDMYAKCSCVVNARQVFDKILERDP------------------------------- 139
L+D YAKC + +R+VFD + ERD
Sbjct: 299 ENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGE 358
Query: 140 ---SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
+ TL V+ A A + G+ +H + E NV V T+++DMY KCG V++AR
Sbjct: 359 INYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMAR 418
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGG 255
F+++REK V SW+AM+ GY MHGH+ +AL++F +M V+P++ITFV VL+ACS G
Sbjct: 419 KAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAG 478
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
L +EG +F++M ++ ++P V+HY CMVDLLG +G L EA DLI M+++PD VWGAL
Sbjct: 479 LLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGAL 538
Query: 316 LNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIK 375
L +C++H +V L E++ KL EL+P + G YV+LSNIYA A WE V ++R LM + G+
Sbjct: 539 LGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLV 598
Query: 376 KSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVEND 435
K S +++K + H FL GD HP ++IY L+ L +++E GYVP SV HDV ++
Sbjct: 599 KPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHE 658
Query: 436 EKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDV 495
EK ++ HSE+LA+AFG++NT GT + I KNL++C DCH AIKFISKI +REI VRD
Sbjct: 659 EKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDS 718
Query: 496 NRYHHFKDGICSCGDYW 512
R+HHF+DG+CSCGDYW
Sbjct: 719 KRFHHFRDGLCSCGDYW 735
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 193/375 (51%), Gaps = 50/375 (13%)
Query: 25 NAHQLFDR-IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKAC 83
N LF++ + + N+F WN +I A +G A+ + + ++ L P+ TFP A+K+C
Sbjct: 103 NLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSC 162
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI--------- 134
SAL + GR+ H+ + +E D+FV +AL+DMY+KC + +AR +FD+I
Sbjct: 163 SALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWT 222
Query: 135 -----------------------LERDPSEA---------TLVTVISASADIAALPQGRE 162
+E SE +V+V+SA + ++
Sbjct: 223 SMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEG 282
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
+HGF + FE ++ V+ L+D YAKCG + V+R +F+ + E+ V+SWN++I YA +G
Sbjct: 283 VHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGM 342
Query: 223 STKALDLFEKM-KD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHY 280
ST+++++F +M KD E+ + +T VL AC+ G G+ + +++ ++ +V
Sbjct: 343 STESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIK-MGLESNVFVG 401
Query: 281 TCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEP 340
T ++D+ G+++ A +MR K + W A++ +HGH A+ ALE E+
Sbjct: 402 TSIIDMYCKCGKVEMARKAFDRMREK-NVKSWSAMVAGYGMHGH---AKEALEVFYEMNM 457
Query: 341 HDAG-NYVILSNIYA 354
NY+ ++ A
Sbjct: 458 AGVKPNYITFVSVLA 472
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG + + T ++ +Y C + A + FDR+ ++N+ W+ ++ Y +G + A+E+
Sbjct: 392 MGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEV 451
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+Y + G+ P+ TF L ACS +EEG
Sbjct: 452 FYEMNMAGVKPNYITFVSVLAACSHAGLLEEG 483
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/547 (41%), Positives = 329/547 (60%), Gaps = 37/547 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G F ++ L+++Y+ L +A ++F ++ R++ WN +I AY N A +
Sbjct: 303 GLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFF 362
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETD-VFVGAALIDMYAK 120
+++ GL PD T + + R +H ++R W + V +G A++DMYAK
Sbjct: 363 FKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAK 422
Query: 121 CSCVVNARQVFDKILERD----------------PSEA------------------TLVT 146
+ +A +VF+ I +D SEA T V+
Sbjct: 423 LGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVS 482
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+++A A + AL QG +HG + L+V V T L+D+Y KCG + A LF Q+ +
Sbjct: 483 ILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRES 542
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V WNA+I+ + +HGH KAL LF +M+DE V+PDH+TF+ +LSACS GL DEG+ FF
Sbjct: 543 SVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFH 602
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
M ++Y I PS++HY CMVDLLG +G L+ A D I M + PD +WGALL +C++HG++
Sbjct: 603 LM-QEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNI 661
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+L + A ++L E++ + G YV+LSNIYA WEGV K+R L +RG+KK+ S IEV
Sbjct: 662 ELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEV 721
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
+ F +G+ SHP C EIYA+L+ L +MK GY+P V DVE DEK +++ HS
Sbjct: 722 NRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHS 781
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
ERLAIAFG+I+TP + + I KNL++C DCH A KFIS+ITEREI VRD R+HHFK+GI
Sbjct: 782 ERLAIAFGIISTPPKSAIRIFKNLRVCGDCHNATKFISRITEREIVVRDSKRFHHFKNGI 841
Query: 506 CSCGDYW 512
CSCGDYW
Sbjct: 842 CSCGDYW 848
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 187/377 (49%), Gaps = 45/377 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + +A L+H+YS + A LFD +P R++ WN +I NG A+++
Sbjct: 201 LGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDV 260
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ G+ D+ T L C+ L I IH VI++ E ++FV ALI+MYAK
Sbjct: 261 LDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAK 320
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ +A++VF ++ RD P TLV++
Sbjct: 321 FGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSL 380
Query: 148 ISASADIAALPQGRELHGFSWRHRFELN-VKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
S +A R +HGF R + + V + A++DMYAK G++ A +F + K
Sbjct: 381 ASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKD 440
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKD--EVQPDHITFVGVLSACSRGGLFDEGRMFF 264
VVSWN +I+GY +G +++A++++ M++ E++ + T+V +L+A + G +G
Sbjct: 441 VVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIH 500
Query: 265 ESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM-RVKPDPGVWGALLNSCKLH 322
+++ + H+D V TC++DL G GRL +A L Q+ R P W A+++ +H
Sbjct: 501 GHLIKTNLHLDVFVG--TCLIDLYGKCGRLVDAMCLFYQVPRESSVP--WNAIISCHGIH 556
Query: 323 GHVKLAELALEKLIELE 339
GH E AL+ E++
Sbjct: 557 GH---GEKALKLFREMQ 570
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 173/360 (48%), Gaps = 42/360 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++ +LV+LY++ + + FD+I +++++ WN +I AY NG + AI+ +Y+LL +
Sbjct: 110 ISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVT 169
Query: 69 -LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
D +TFP LKAC L +GR+IH V + ++ DVFV A+LI MY++ V A
Sbjct: 170 KFQADFYTFPPVLKACQTLV---DGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIA 226
Query: 128 RQVFDKILERDPS---------------------------------EATLVTVISASADI 154
R +FD + RD T+ +++ A +
Sbjct: 227 RSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQL 286
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
+ +H + +H E + V AL++MYAK G + A+ +F+Q+ + VVSWN++I
Sbjct: 287 GDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSII 346
Query: 215 TGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
Y + A F KM+ + ++PD +T V + S ++ + R ++R +
Sbjct: 347 AAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWL 406
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
+V ++D+ G +D A + + VK D W L++ +G LA A+E
Sbjct: 407 MEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVK-DVVSWNTLISGYTQNG---LASEAIE 462
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 152/321 (47%), Gaps = 10/321 (3%)
Query: 56 VAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALI 115
+A L+ L+ G + NF + ++L + R + + R DV+ ++I
Sbjct: 91 LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRK----DVYTWNSMI 146
Query: 116 DMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELN 175
Y + A F ++L +A T L GR++H + ++ F+ +
Sbjct: 147 SAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVDGRKIHCWVFKLGFQWD 206
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD 235
V V +L+ MY++ G V +AR+LF+ + + + SWNAMI+G +G++ +ALD+ ++M+
Sbjct: 207 VFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL 266
Query: 236 E-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLD 294
E + D +T +L C++ G + +++ + ++ + ++++ G L
Sbjct: 267 EGINMDSVTVASILPVCAQLGDISTATLIHLYVIK-HGLEFELFVSNALINMYAKFGNLG 325
Query: 295 EACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK--LIELEPHDAGNYVILSNI 352
+A + QM ++ D W +++ + + + A K L LEP D V L++I
Sbjct: 326 DAQKVFQQMFLR-DVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEP-DLLTLVSLASI 383
Query: 353 YARAANWEGVAKLRKLMIDRG 373
A++ +++ + ++ RG
Sbjct: 384 AAQSRDYKNSRSVHGFIMRRG 404
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/538 (41%), Positives = 327/538 (60%), Gaps = 34/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++T L +Y C + +A ++F+ +P R++ WN +I +G E A +++R+L+
Sbjct: 283 VSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKEC 342
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD T+ L AC+ + G+ IH +++ +DV G ALI+MY+K + +AR
Sbjct: 343 VAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDAR 402
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
QVFD++ +RD ++ T + V+ A ++
Sbjct: 403 QVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPV 462
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL G+E+H + ++ V AL+ MY KCG V+ A + E + + VV+WN +I
Sbjct: 463 ALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIG 522
Query: 216 GYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G A +G +AL FE MK +E++P+ TFV V+SAC L +EGR F SM +DY I
Sbjct: 523 GLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIV 582
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P+ +HY CMVD+L +G L EA D+I+ M KP +WGALL +C+ HG+V++ E A E+
Sbjct: 583 PTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQ 642
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
++LEP +AG YV LS IYA A W VAKLRKLM +RG+KK SWIEV + H+F++
Sbjct: 643 CLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVA 702
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD SHP +EIY++L+ L ++K GYVP T V HD++ + K +C HSE+LAIA+GL
Sbjct: 703 GDQSHPRTEEIYSELEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGL 762
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I+TP T + ++KNL++C DCH A KFISKIT REI RD +R+HHFK+G CSCGDYW
Sbjct: 763 ISTPPETPIRVSKNLRVCTDCHTATKFISKITGREIIARDAHRFHHFKNGECSCGDYW 820
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 182/371 (49%), Gaps = 38/371 (10%)
Query: 3 FGFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
FG P + L+ LY C ++ A +LFD+ +++ WNV+I YA G + A L
Sbjct: 73 FGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNL 132
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + + GL PD FTF L ACS+ +A+ GR +H V+ + VG ALI MYAK
Sbjct: 133 FTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAK 192
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C V +AR+VFD + RD PS T + V
Sbjct: 193 CGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNV 252
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+SA +AAL +G+++H +V+V TAL MY KCG VK AR +FE L + V
Sbjct: 253 LSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDV 312
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
++WN MI G G +A +F +M K+ V PD +T++ +LSAC+R G G+
Sbjct: 313 IAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHAR 372
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
V+D + V+ ++++ +G + +A + +M K D W AL+ G V
Sbjct: 373 AVKDGLVS-DVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTALVGGYADCGQVV 430
Query: 327 LAELALEKLIE 337
+ +K+++
Sbjct: 431 ESFSTFKKMLQ 441
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 196/418 (46%), Gaps = 41/418 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + + L+ +Y+ C + +A ++FD + R+ W L AYA +G + +++ Y
Sbjct: 175 GLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTY 234
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ +L+ G+ P T+ L AC +L+A+E+G++IH ++ ++ +DV V AL MY KC
Sbjct: 235 HAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKC 294
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
V +AR+VF+ + RD P T + ++
Sbjct: 295 GAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAIL 354
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A L G+E+H + + +V+ AL++MY+K G +K AR +F+++ ++ VV
Sbjct: 355 SACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVV 414
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SW A++ GYA G ++ F+KM + V+ + IT++ VL ACS G+ +
Sbjct: 415 SWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEV 474
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH--V 325
V+ I + ++ + G +++A + M + D W L+ +G
Sbjct: 475 VKA-GIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTR-DVVTWNTLIGGLAQNGRGLE 532
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI---KKSIAC 380
L + + K E+ P+ ++S R EG + + D GI +K AC
Sbjct: 533 ALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYAC 590
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 175/404 (43%), Gaps = 81/404 (20%)
Query: 49 AWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDV 108
W P +V L+ + ++ D++ + L++C + G+++HE ++R + +V
Sbjct: 24 GWYAPADVLQYLHQKGSQV----DSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNV 79
Query: 109 FVGAALIDMYAKCSCVVNARQVFDKILER------------------------------- 137
++ L+ +Y C V AR++FDK +
Sbjct: 80 YIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQE 139
Query: 138 --DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
+P + T V+++SA + AAL GRE+H N V AL+ MYAKCG V+ A
Sbjct: 140 GLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDA 199
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRG 254
R +F+ + + VSW + YA G++ ++L + M E V+P IT++ VLSAC
Sbjct: 200 RRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSL 259
Query: 255 GLFDEGRMFFESMVR-DYHIDPSVQH-----------------------------YTCMV 284
++G+ +V ++H D V + M+
Sbjct: 260 AALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMI 319
Query: 285 DLLGHSGRLDEACDLIMQMR---VKPDPGVWGALLNSCKLHGHVKLAELALEKLIE---L 338
L SG+L+EA + +M V PD + A+L++C G + + + ++ +
Sbjct: 320 GGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLV 379
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSW 382
GN +I N+Y++A G K + + DR K+ + SW
Sbjct: 380 SDVRFGNALI--NMYSKA----GSMKDARQVFDRMPKRDVV-SW 416
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/538 (42%), Positives = 315/538 (58%), Gaps = 35/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ + VH+Y C + +A +FD++ RN+ WN +I A A+ L+ ++ G
Sbjct: 372 VGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREG 431
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
PD TF L A A+E + +H I + D+ VG AL+ MYAKC + A+
Sbjct: 432 FFPDATTFVNILSANVGEEALEWVKEVHSYAI-DAGLVDLRVGNALVHMYAKCGNTMYAK 490
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
QVFD ++ER+ P T V+++SA A
Sbjct: 491 QVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTG 550
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL +E+H + +++V ALV MYAKCG V AR +F+ + E+ V SW MI
Sbjct: 551 ALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIG 610
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G A HG ALDLF KMK E +P+ +FV VLSACS GL DEGR F S+ +DY I+
Sbjct: 611 GLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIE 670
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P+++HYTCMVDLLG +G+L+EA I+ M ++P WGALL +C +G++++AE A ++
Sbjct: 671 PTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKE 730
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
++L+P A YV+LSNIYA NWE +R +M RGI+K SWIEV N+ H+F+
Sbjct: 731 RLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVV 790
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD SHP EIYAKLK L R+K GYVP T V + + + K +C HSE+LAI +GL
Sbjct: 791 GDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSEKLAIVYGL 850
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++TP + + KNL++C DCH A KFISK+T REI RD R+HHFKDG+CSCGDYW
Sbjct: 851 MHTPYRNPIRVYKNLRVCSDCHTATKFISKVTGREIVARDAKRFHHFKDGVCSCGDYW 908
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 191/427 (44%), Gaps = 82/427 (19%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+H+Y+ C + +A +FD + R++ WN +I A NG A ++ ++ + G
Sbjct: 271 VGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEG 330
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
VPD+ T+ L + A E + +H+ + +D+ VG+A + MY +C + +A+
Sbjct: 331 FVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQ 390
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+FDK+ R+ P T V ++SA+
Sbjct: 391 LIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEE 450
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL +E+H ++ ++++V ALV MYAKCG A+ +F+ + E+ V +W MI+
Sbjct: 451 ALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMIS 509
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLF----------------- 257
G A HG +A LF +M ++ + PD T+V +LSAC+ G
Sbjct: 510 GLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVS 569
Query: 258 ------------------DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
D+ R F+ M ++ V +T M+ L GR +A DL
Sbjct: 570 DLRVGNALVHMYAKCGSVDDARRVFDDM-----LERDVYSWTVMIGGLAQHGRGLDALDL 624
Query: 300 IMQMRV---KPDPGVWGALLNSCKLHGHVKLAE---LALEKLIELEPHDAGNYVILSNIY 353
++M++ KP+ + A+L++C G V L+L + +EP +Y + ++
Sbjct: 625 FVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEP-TMEHYTCMVDLL 683
Query: 354 ARAANWE 360
RA E
Sbjct: 684 GRAGQLE 690
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 194/415 (46%), Gaps = 49/415 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + T LV++Y C + +A +FD++ +RN+ W V+I A G + A +
Sbjct: 60 GFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRF 119
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ G +P+++T+ L A ++ A+E + +H + D+ VG AL+ MYAK
Sbjct: 120 LQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKS 179
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +AR VFD ++ERD P+ T ++++
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSIL 239
Query: 149 SASA--DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+ASA AL +E+H + + F +++V AL+ MYAKCG + AR +F+ + ++
Sbjct: 240 NASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRD 299
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V+SWNAMI G A +G +A +F KM+ E PD T++ +L+ G ++ + +
Sbjct: 300 VISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHK 359
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
V + + ++ + V + G +D+A LI + W A++
Sbjct: 360 HAV-EVGLVSDLRVGSAFVHMYIRCGSIDDA-QLIFDKLAVRNVTTWNAMIGGV---AQQ 414
Query: 326 KLAELALEKLIELEPH----DAGNYV-ILS-NIYARAANWEGVAKLRKLMIDRGI 374
K AL +++ DA +V ILS N+ A W V ++ ID G+
Sbjct: 415 KCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEW--VKEVHSYAIDAGL 467
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 175/380 (46%), Gaps = 63/380 (16%)
Query: 44 LIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK 103
+I YA G E A+++Y ++ G P+ T+ LKAC + +++ G++IH +I++
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 104 WETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------------------------- 138
+++DV V AL++MY KC + +A+ +FDK++ER+
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 139 --------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCG 190
P+ T V++++A+A AL +E+H + L+++V ALV MYAK G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 191 LVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVL- 248
+ AR +F+ + E+ + SW MI G A HG +A LF +M + P+ T++ +L
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240
Query: 249 -SACSRGGLFD--------EGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
SA + G + G+ F + D + ++ H + G +D+A L
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKAGF---ISDLRVGNALIH------MYAKCGSIDDA-RL 290
Query: 300 IMQMRVKPDPGVWGALL-----NSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYA 354
+ D W A++ N C ++ E + D+ Y+ L N +
Sbjct: 291 VFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVP----DSTTYLSLLNTHV 346
Query: 355 RAANWEGVAKLRKLMIDRGI 374
WE V ++ K ++ G+
Sbjct: 347 STGAWEWVKEVHKHAVEVGL 366
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 161/364 (44%), Gaps = 77/364 (21%)
Query: 114 LIDMYAKCSCVVNARQVFDKILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHR 171
+I YA+ +A +V+ ++ P+E T ++++ A +L G+++H +
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
F+ +V+V+TALV+MY KCG + A+ +F+++ E+ V+SW MI G A +G +A F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 232 KMKDE-VQPDHITFVGVLSA-----------------------------------CSRGG 255
+M+ E P+ T+V +L+A ++ G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK---PDPGVW 312
D+ R+ F+ MV + + +T M+ L GR EA L +QM P+ +
Sbjct: 181 SIDDARVVFDGMV-----ERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTY 235
Query: 313 GALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNI---------YARAANWEGVA 363
++LN+ + + ALE + E+ H AG +S++ YA+ + +
Sbjct: 236 LSILNASAI-----TSTGALEWVKEVHKH-AGKAGFISDLRVGNALIHMYAKCGSIDDAR 289
Query: 364 KLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVP 423
+ M DR + SW +A + G A + E + +M++ G+VP
Sbjct: 290 LVFDGMCDRDV-----ISW-------NAMIGGLAQNGCGHEAFTIFL----KMQQEGFVP 333
Query: 424 GTES 427
+ +
Sbjct: 334 DSTT 337
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/538 (41%), Positives = 325/538 (60%), Gaps = 34/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++T L +Y C +A ++F+ + R++ WN +IR + +G E A ++R+LE G
Sbjct: 267 VSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEG 326
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD T+ L AC+ + G+ IH ++ +DV G ALI+MY+K + +AR
Sbjct: 327 VAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDAR 386
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
QVFD++ +RD ++ T + V+ A ++
Sbjct: 387 QVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPV 446
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL G+E+H + ++ V AL+ MY KCG V+ A +FE + + VV+WN +I
Sbjct: 447 ALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIG 506
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G +G +AL +E MK E ++P+ TFV VLSAC L +EGR F M +DY I
Sbjct: 507 GLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIV 566
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P+ +HY CMVD+L +G L EA D+I+ + +KP +WGALL +C++H +V++ E A E
Sbjct: 567 PTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEH 626
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
++LEP +AG YV LS IYA A W VAKLRK M +RG+KK SWIE+ + H+F++
Sbjct: 627 CLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVA 686
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
D SHP EIYA+L+ L+ +MK GYVP T V HD++++ K +C HSE+LAIA+GL
Sbjct: 687 RDQSHPRTQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGL 746
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I+TP GT + I+KNL++C DCH A KFISKIT+REI RD +R+HHFK+G CSCGDYW
Sbjct: 747 ISTPPGTPIRISKNLRVCTDCHTATKFISKITKREIIARDAHRFHHFKNGECSCGDYW 804
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 166/343 (48%), Gaps = 36/343 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ LY+ C ++ A QLFD+ +++ WNV+I YA G + A L+ + +
Sbjct: 65 ITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQER 124
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L PD FTF L ACS+ + + GR IH V+ D VG ALI MYAKC V +AR
Sbjct: 125 LEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDAR 184
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+VFD + RD PS T + V+SA +A
Sbjct: 185 RVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLA 244
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL +G+++H + +V+V TAL MY KCG K AR +FE L + V++WN MI
Sbjct: 245 ALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIR 304
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+ G +A F +M +E V PD T+ VLSAC+R G G+ +D +
Sbjct: 305 GFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVS 364
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
V+ ++++ +G + +A + +M K D W LL
Sbjct: 365 -DVRFGNALINMYSKAGSMKDARQVFDRM-PKRDVVSWTTLLG 405
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 146/285 (51%), Gaps = 34/285 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + L+ +Y+ C + +A ++FD + R+ W L AYA +G E +++ Y
Sbjct: 159 GLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTY 218
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ +L+ + P T+ L AC +L+A+E+G++IH ++ +++ +DV V AL MY KC
Sbjct: 219 HAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKC 278
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+AR+VF+ + RD P AT TV+
Sbjct: 279 GAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVL 338
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A L +G+E+H + + +V+ AL++MY+K G +K AR +F+++ ++ VV
Sbjct: 339 SACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVV 398
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACS 252
SW ++ YA ++ F++M + V+ + IT++ VL ACS
Sbjct: 399 SWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACS 443
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 179/432 (41%), Gaps = 101/432 (23%)
Query: 49 AWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDV 108
W P +V L+ + G D++ + L++C + G+++HE ++R + +V
Sbjct: 8 GWYAPADVLQYLHRK----GPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNV 63
Query: 109 FVGAALIDMYAKCSCVVNARQVFDKILER------------------------------- 137
++ L+ +YA C V ARQ+FDK +
Sbjct: 64 YITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQE 123
Query: 138 --DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
+P + T V+++SA + A L GRE+H + V AL+ MYAKCG V+ A
Sbjct: 124 RLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDA 183
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRG 254
R +F+ + + VSW + YA G+ ++L + M ++ V+P IT++ VLSAC
Sbjct: 184 RRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSL 243
Query: 255 GLFDEGRMFFESMVR-DYHIDPSVQH-----------------------------YTCMV 284
++G+ +V +YH D V + M+
Sbjct: 244 AALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMI 303
Query: 285 DLLGHSGRLDEACDLIMQM---RVKPDPGVWGALLNSCKLHG--------HVKLAELALE 333
SG+L+EA +M V PD + +L++C G H + A+ L
Sbjct: 304 RGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLV 363
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
+ GN +I N+Y++A G K + + DR K+ + SW + +
Sbjct: 364 SDVRF-----GNALI--NMYSKA----GSMKDARQVFDRMPKRDVV-SWTTLLGR----- 406
Query: 394 SGDASHPNCDEI 405
+ +CD++
Sbjct: 407 -----YADCDQV 413
>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/517 (41%), Positives = 324/517 (62%), Gaps = 13/517 (2%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T+L+ + L A +F NLF++N LIR A N +E ++ + +L +
Sbjct: 74 VVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLS 133
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD T PF LK+ +AL + GR +H V++ E D FV +L+DMY K +
Sbjct: 134 IRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGL 193
Query: 129 QVFDKILERD------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
Q+FD+ +R+ P++ T+V+ + A I AL G +H + + F+LN
Sbjct: 194 QLFDESPQRNKAESILLWNGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNR 253
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE 236
+ TALVDMYAKCG +K A +F + + K +++W+ MI G+A+HG +AL F KMK
Sbjct: 254 GIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSA 313
Query: 237 -VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
+ PD + F+ +L+ACS G D+G FFESM DY I+P+++HYT +VDLLG +GRLDE
Sbjct: 314 GINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDE 373
Query: 296 ACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYAR 355
A I M + PD +WGAL +C+ H ++++AEL EKL++LEP G+YV LSN+YA
Sbjct: 374 ALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAA 433
Query: 356 AANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGR 415
WE V ++R LM +RG++K S+IEV+ + H+F++GD +H +EI KL+ +
Sbjct: 434 VGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITAS 493
Query: 416 MKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDC 475
K+ GY+P T V H++E +EK + + HSE+LA+AFGLI+T G+ + I KNL++C DC
Sbjct: 494 AKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDC 553
Query: 476 HIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
H +K+ SK++ REI +RD+ R+HHFKDG CSCGDYW
Sbjct: 554 HSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 590
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + T LV +Y+ C + +A ++F ++L W+V+I +A +G ++ A++ +
Sbjct: 248 GFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCF 307
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDV 99
++ G+ PD F L ACS +++G E +
Sbjct: 308 VKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESM 345
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 137 RDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
R P E + +I AS LPQ ++H + H N +V T L+ + A
Sbjct: 37 RSP-ETHFIPLIHASN---TLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYAL 92
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSA----- 250
++F + +NA+I G A + ++ F M + ++PD +T VL +
Sbjct: 93 SIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALV 152
Query: 251 ------CSRGGLFDEGRMFFESMVRDYHIDPSVQ--HYTCMVDLLGHSGRLDEACDLIMQ 302
C GG+ G + F+S VR +D V+ + L S + ++A +++
Sbjct: 153 DVGLGRCLHGGVMKLG-LEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLW 211
Query: 303 MRVKP-DPGVWGALLNSCKLHGHVKLAE 329
V+P D V ALL +C G +++ E
Sbjct: 212 NGVRPNDLTVVSALL-ACTKIGALQVGE 238
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/543 (39%), Positives = 326/543 (60%), Gaps = 33/543 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
FG L L+ +YS L++A Q+F+ + +R++ W +I YA G ++++ L++
Sbjct: 282 FGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFH 341
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+ + G+ PD FT L AC+ +E G+ +H + NK ++D+FV AL+DMYAKC
Sbjct: 342 EMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCG 401
Query: 123 CVVNARQVFDKILERD--------------------------------PSEATLVTVISA 150
+ +A VF ++ +D P+ T+ ++ A
Sbjct: 402 SMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSKPNSITMACILPA 461
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
A +AAL +G+E+HG R+ F L+ V ALVDMY KCG + +AR LF+ + EK +VSW
Sbjct: 462 CASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSW 521
Query: 211 NAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
MI GY MHG+ ++A+ F +M++ ++PD ++F+ +L ACS GL DEG FF M
Sbjct: 522 TVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRN 581
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+ I+P +HY C+VDLL +G L +A I M ++PD +WGALL C+++ VKLAE
Sbjct: 582 NCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAE 641
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
E + ELEP + G YV+L+NIYA A WE V KLR+ + RG++K+ CSWIE+K K
Sbjct: 642 KVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKV 701
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLA 449
H F++GD+SHP ++I LK RMKE G+ P ++ EK +C HSE++A
Sbjct: 702 HIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIA 761
Query: 450 IAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
+AFG+++ P G + +TKNL++C DCH KF+SK+ +R+I +RD NR+HHFKDG CSC
Sbjct: 762 MAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCR 821
Query: 510 DYW 512
+W
Sbjct: 822 GHW 824
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 177/364 (48%), Gaps = 29/364 (7%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL +KLV +Y C L ++FD++ +FLWN+L+ YA G + ++ L+ R+ E+
Sbjct: 137 VLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMREL 196
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ +E R++ +++ + DV ++I Y
Sbjct: 197 GI-----------------RRVESARKLFDEL----GDRDVISWNSMISGYVSNGLSEKG 235
Query: 128 RQVFDK--ILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
+F++ +L + AT+V+V++ ++ L GR LHG++ + F + + L+DM
Sbjct: 236 LDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDM 295
Query: 186 YAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITF 244
Y+K G + A +FE + E+ VVSW +MI GYA G S ++ LF +M+ E + PD T
Sbjct: 296 YSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTI 355
Query: 245 VGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
+L AC+ GL + G+ + +++ + + ++D+ G + +A + +M+
Sbjct: 356 TTILHACACTGLLENGK-DVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQ 414
Query: 305 VKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAK 364
VK D W ++ + L AL +E++ + N + ++ I A+ + +
Sbjct: 415 VK-DIVSWNTMIGG---YSKNSLPNEALNLFVEMQYNSKPNSITMACILPACASLAALER 470
Query: 365 LRKL 368
+++
Sbjct: 471 GQEI 474
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 141/302 (46%), Gaps = 26/302 (8%)
Query: 5 FHPVLATKLV--HLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F P T LV +LY +C + + + I + + +N+ I + G A+EL
Sbjct: 34 FRPSSKTPLVSSNLYHSCATIGTSVLPSETIDCK-ITDYNIEICRFCELGNLRRAMELIN 92
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+ + L + T+ L+ C+ L +I++GRRIH + N E D +G+ L+ MY C
Sbjct: 93 QSPKPDL--ELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCG 150
Query: 123 CVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
+ R++FDK+ L +++ A I + L ++ EL ++
Sbjct: 151 DLREGRRIFDKVANEKVFLWNL--LMNGYAKIGNFRESLSL----FKRMRELGIR----- 199
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDH 241
V+ AR LF++L ++ V+SWN+MI+GY +G S K LDLFE+M + D
Sbjct: 200 --------RVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDL 251
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
T V V++ CS G+ GR ++ + C++D+ SG L+ A +
Sbjct: 252 ATMVSVVAGCSNTGMLLLGRALHGYAIK-ASFGKELTLNNCLLDMYSKSGNLNSAIQVFE 310
Query: 302 QM 303
M
Sbjct: 311 TM 312
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 23/256 (8%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF +A LV +Y C L A LFD IP+++L W V+I Y +G AI +
Sbjct: 482 GFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAF 541
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK--WETDVFVGAALIDMYA 119
+ G+ PD +F L ACS ++EG +++RN E A ++D+ A
Sbjct: 542 NEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFF-NMMRNNCCIEPKSEHYACIVDLLA 600
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL---NV 176
+ + A + F K++ +P +AT+ + I +L H FEL N
Sbjct: 601 RAGNLSKAYK-FIKMMPIEP-DATIWGALLCGCRIY---HDVKLAEKVAEHVFELEPENT 655
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQ-----LREKRVVSW-------NAMITGYAMHGHST 224
L ++YA+ + + L E+ LR+ SW + +TG + H +
Sbjct: 656 GYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLAN 715
Query: 225 KALDLFEKMKDEVQPD 240
K L +K + ++ +
Sbjct: 716 KIELLLKKTRTRMKEE 731
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/558 (39%), Positives = 330/558 (59%), Gaps = 52/558 (9%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P + +L+ + S + + A ++F N++L+ LI + Y I LYY+++
Sbjct: 64 PFVVFELLRVCSNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMIN 123
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
LVPD++ LKAC A++EGR +H V++ ++ + LI++Y KC +
Sbjct: 124 SSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFED 183
Query: 127 ARQVFDKILERD------------------------------------------------ 138
AR+VFD++ ERD
Sbjct: 184 ARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNMQRE 243
Query: 139 ---PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
P+E T+V V+SA +++ AL GR + + +HR ELN V AL++MY++CG + A
Sbjct: 244 DVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEA 303
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRG 254
+ +FEQ++EK V+++N+MI G+A+HG S +A++LF + K P +TFVGVL+ACS G
Sbjct: 304 QRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHG 363
Query: 255 GLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGA 314
GL + G F SM +DY I+P ++HY CMVDLLG GRL+EA I M+V PD + GA
Sbjct: 364 GLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGA 423
Query: 315 LLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
LL++CK+HG+++LAE + L+ + D+G Y++LSN Y+ + W+ A++R M + GI
Sbjct: 424 LLSACKIHGNLELAERVAKSLVACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGI 483
Query: 375 KKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVEN 434
+K CS IEV N+ H FL GD HP ++IY KL+ L ++ GY P TE V HD+E
Sbjct: 484 EKEPGCSSIEVNNEIHEFLLGDLRHPQKEKIYKKLEELNQILRLEGYTPATEVVLHDIEK 543
Query: 435 DEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRD 494
EK + HSERLAI +GLI+T T L + KNL++C+DCH+ IK IS IT R+I VRD
Sbjct: 544 SEKEWALAIHSERLAICYGLISTKPLTTLRVVKNLRVCNDCHLTIKLISNITRRKIVVRD 603
Query: 495 VNRYHHFKDGICSCGDYW 512
NR+HHF++G+CSCGDYW
Sbjct: 604 RNRFHHFENGVCSCGDYW 621
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 174/413 (42%), Gaps = 47/413 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNL------------------FLWN 42
+G + + KL+ LY C +A ++FD +P+R++ W
Sbjct: 159 LGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWT 218
Query: 43 VLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN 102
+I NG A+E++ + ++P+ T L ACS L A++ GR + + ++
Sbjct: 219 AMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKH 278
Query: 103 KWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRE 162
+ E + FVG ALI+MY++C + A++VF+++ E++ T ++I A + E
Sbjct: 279 RIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNV--ITYNSMIMGFALHGKSVEAVE 336
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-----EKRVVSWNAMITGY 217
L + F + +++ + GL ++ +F + E ++ + M+
Sbjct: 337 LFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLL 396
Query: 218 AMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
G +A MK V PDH+ +LSAC G + +S+V + D
Sbjct: 397 GRLGRLEEAYSFIRMMK--VAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGT 454
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPG-------------VWGALLNSCKL 321
Y + + SG+ EA ++ MR ++ +PG + G L + K
Sbjct: 455 --YILLSNAYSSSGKWKEAAEVRTNMREEGIEKEPGCSSIEVNNEIHEFLLGDLRHPQKE 512
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
+ KL E L +++ LE + V+L +I W +L I G+
Sbjct: 513 KIYKKLEE--LNQILRLEGYTPATEVVLHDIEKSEKEWALAIHSERLAICYGL 563
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/531 (43%), Positives = 332/531 (62%), Gaps = 39/531 (7%)
Query: 18 SACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG-LVPDNFTF 76
S DC+ ++FD +P R++ WN +I +A NG Y A+++ + + G L PD+FT
Sbjct: 174 SGIDCVK---KVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTL 230
Query: 77 PFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS-------------- 122
L + + +G+ IH +RN ++ DVF+G++LIDMYAKC+
Sbjct: 231 SSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPR 290
Query: 123 ------------CVVNAR-----QVFDKILERD--PSEATLVTVISASADIAALPQGREL 163
CV N F ++L+ + P + +VI A A + AL GR+L
Sbjct: 291 KDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQL 350
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
HG R F+ N + ++LVDMYAKCG +K+AR +F+++ ++ +V+W A+I G AMHGH+
Sbjct: 351 HGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHA 410
Query: 224 TKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTC 282
A+ LFE M +D V+P ++ F+ VL+ACS GL DEG +F SM RD+ I P ++HY
Sbjct: 411 LDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAA 470
Query: 283 MVDLLGHSGRLDEACDLIMQMR-VKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPH 341
+ DLLG +GRL+EA D I MR V+P VW LL +C+ H V+LAE L+KL+ ++
Sbjct: 471 VADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSE 530
Query: 342 DAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPN 401
+ G YV++SNIY+ A W+ A+LR M +G+KK+ ACSWIEV N+ H F++GD SHP
Sbjct: 531 NMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPY 590
Query: 402 CDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGT 461
D+I L L +M++ GYV T V HDV+ + K ++ HSERLAIA+G+I+T GT
Sbjct: 591 YDKINKALDVLLEQMEKEGYVIDTNQVLHDVDEELKRELLHNHSERLAIAYGIISTTAGT 650
Query: 462 RLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ + KN+++C DCH AIKFI+KI REITVRD +R+HHFK+G CSCGDYW
Sbjct: 651 TIRVIKNIRVCADCHTAIKFITKIVGREITVRDNSRFHHFKNGSCSCGDYW 701
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 151/347 (43%), Gaps = 52/347 (14%)
Query: 41 WNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVI 100
W+ +I+ Y + ++ + + + + P+ FP LKA + L + +H +
Sbjct: 78 WSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTV 137
Query: 101 RNKWETDVFVGAALIDMYAKC---------------SCVVNARQVFDKILERD------- 138
R ++D+++ ALI+ YAK S + ++VFD + RD
Sbjct: 138 RLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTV 197
Query: 139 ---------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHR 171
P TL +++ A+ + +G+E+HG++ R+
Sbjct: 198 IAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNG 257
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
F+ +V + ++L+DMYAKC ++ + F L K +SWN++I G +G + L F
Sbjct: 258 FDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFR 317
Query: 232 KM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+M K+ V+P ++F V+ AC+ GR +VR D + + +VD+
Sbjct: 318 RMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVR-LGFDDNEFIASSLVDMYAKC 376
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
G + A + K D W A++ C +HGH A E ++E
Sbjct: 377 GNIKMA-RYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLE 422
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + +A+ LV +Y+ C + A +FDRI +R++ W +I A +G A+ L
Sbjct: 357 LGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSL 416
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN 102
+ +LE G+ P F L ACS ++EG R + R+
Sbjct: 417 FENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERD 458
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/554 (38%), Positives = 331/554 (59%), Gaps = 43/554 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G G L+ +Y+ + ++ LF+ R++ WN +I +++ + + A+ +
Sbjct: 143 GIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFF 202
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK-WETDVFVGAALIDMYAK 120
++ G+ D T L ACS L ++ G+ IH V+RN + FVG+AL+DMY
Sbjct: 203 RLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCN 262
Query: 121 CSCVVNARQVFDKILERD----------------------------------PSEATLVT 146
C V + R+VFD IL R P+ T+ +
Sbjct: 263 CRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMAS 322
Query: 147 VISASA-DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
V+ A +AA+ +G+E+H ++ R+ ++ V +ALVDMYAKCG + ++R +F ++ K
Sbjct: 323 VMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNK 382
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKM------KDEVQPDHITFVGVLSACSRGGLFDE 259
V++WN +I MHG +AL+LF+ M E +P+ +TF+ V +ACS GL E
Sbjct: 383 NVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISE 442
Query: 260 GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP-GVWGALLNS 318
G F M D+ ++P+ HY C+VDLLG +G+L+EA +L+ M + D G W +LL +
Sbjct: 443 GLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGA 502
Query: 319 CKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
C++H +V+L E+A + L+ LEP+ A +YV+LSNIY+ A W ++RK M G+KK
Sbjct: 503 CRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEP 562
Query: 379 ACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKA 438
CSWIE +++ H F++GD SHP ++++ L+ L +M++ GYVP T V H+V+ DEK
Sbjct: 563 GCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKE 622
Query: 439 NMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRY 498
N++C HSE+LAIAFG++NTP GT + + KNL++C+DCH A KFISKI EREI VRDV R+
Sbjct: 623 NLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRF 682
Query: 499 HHFKDGICSCGDYW 512
HHFK+G CSCGDYW
Sbjct: 683 HHFKEGTCSCGDYW 696
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 156/360 (43%), Gaps = 67/360 (18%)
Query: 34 PQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
P R+ W +R+ + + AI Y + G PDNF FP LKA S L ++ G
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 94 RIHEDVIRNKWETD---------------------VFVGAALIDMYAKCSCVVNARQVFD 132
+IH ++ + + F AL+ MYAK V +++ +F+
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172
Query: 133 KILERDP----------------SEA-----------------TLVTVISASADIAALPQ 159
++RD SEA T+ +V+ A + + L
Sbjct: 173 SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDV 232
Query: 160 GRELHGFSWRHRFEL-NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
G+E+H + R+ + N V +ALVDMY C V+ R +F+ + +R+ WNAMI+GYA
Sbjct: 233 GKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYA 292
Query: 219 MHGHSTKALDLFEKMKD--EVQPDHITFVGVLSACSRG-GLFDEGRMFFESMVRDYHIDP 275
+G KAL LF +M + P+ T V+ AC +G+ +R+ +
Sbjct: 293 RNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNM-LAS 351
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGHVKLAELALE 333
+ + +VD+ G L+ + + +M P+ V W L+ +C +HG E ALE
Sbjct: 352 DITVGSALVDMYAKCGCLNLSRRVFNEM---PNKNVITWNVLIMACGMHGK---GEEALE 405
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/519 (42%), Positives = 311/519 (59%), Gaps = 34/519 (6%)
Query: 28 QLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALS 87
++FD + +R+ WN LI A + ++ A+ + + G +PD FT L + +
Sbjct: 125 KVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECA 184
Query: 88 AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD--------- 138
I+ G +H I+N ++ DVFVG++LIDMYA C+ + + +VFD + D
Sbjct: 185 DIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLA 244
Query: 139 ------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFEL 174
P T ++I A +++ L G++LH + R RF
Sbjct: 245 GYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFND 304
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
N+ + ++L+DMY KCG V +AR +F ++ +VSW AMI GYA+HG +T+A LFE+M+
Sbjct: 305 NIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERME 364
Query: 235 -DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
V+P+HITF+ VL+ACS GL D G +F SM Y PS++H + D LG +G L
Sbjct: 365 LGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDL 424
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIY 353
DEA + I +M++KP VW LL +C++H + LAE +K+ ELEP G++VILSN+Y
Sbjct: 425 DEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMY 484
Query: 354 ARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLE 413
+ + W A+LRK M +G+KK ACSWIEVKNK H F++ D SHP D I L
Sbjct: 485 SASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYS 544
Query: 414 GRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICD 473
+M GYVP E V D+E ++K ++C HSE+LAI FG+I+TP GT + + KNL++C
Sbjct: 545 EQMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCV 604
Query: 474 DCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
DCHIA KFISKI REI VRDVNR+H FKDG CSCGD+W
Sbjct: 605 DCHIATKFISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 152/352 (43%), Gaps = 60/352 (17%)
Query: 41 WNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDN---FTFPFALKACSALSAIEEGRRIHE 97
W IR A G + AI L+ ++ + P + + P ALK+C+ L +H
Sbjct: 15 WAYQIRMAASQGQFLHAISLFLQM-RASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 73
Query: 98 DVIRNKWETDVFVGAALIDMYAK--------------------CSCVVNARQVFDKILER 137
IR+ D F AL+++ K + + R+VFD++LER
Sbjct: 74 LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 133
Query: 138 D---------------------------------PSEATLVTVISASADIAALPQGRELH 164
D P TL TV+ A+ A + +G +H
Sbjct: 134 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 193
Query: 165 GFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST 224
G++ ++ F+ +V V ++L+DMYA C + + +F+ + V WN+M+ GYA +G
Sbjct: 194 GYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVE 253
Query: 225 KALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
+AL +F +M + V+P +TF ++ A L G+ ++R D ++ + +
Sbjct: 254 EALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFND-NIFISSSL 312
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+D+ G +D A + ++ PD W A++ LHG A + E++
Sbjct: 313 IDMYCKCGNVDIARRVFNGIQ-SPDIVSWTAMIMGYALHGPTTEAFVLFERM 363
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 148/322 (45%), Gaps = 35/322 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + L+ +Y+ C + + ++FD + LWN ++ YA NG E A+ ++
Sbjct: 200 GFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIF 259
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+L+ G+ P TF + A LS + G+++H +IR ++ ++F+ ++LIDMY KC
Sbjct: 260 RRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKC 319
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHG-----FSWRHRFEL-N 175
V AR+VF+ I D ++S +A I G LHG F R EL N
Sbjct: 320 GNVDIARRVFNGIQSPD--------IVSWTAMI----MGYALHGPTTEAFVLFERMELGN 367
Query: 176 VKVK----TALVDMYAKCGLVKVARNLFEQLREK-----RVVSWNAMITGYAMHGHSTKA 226
VK A++ + GLV F + + + A+ G +A
Sbjct: 368 VKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEA 427
Query: 227 LDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD-YHIDP-SVQHYTCMV 284
+ +MK ++P + +L AC + + E + + + ++P S+ + +
Sbjct: 428 YNFISEMK--IKPTSSVWSTLLRACR----VHKNTVLAEEVAKKIFELEPKSMGSHVILS 481
Query: 285 DLLGHSGRLDEACDLIMQMRVK 306
++ SGR +EA L MR+K
Sbjct: 482 NMYSASGRWNEAAQLRKSMRIK 503
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/581 (38%), Positives = 328/581 (56%), Gaps = 70/581 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNG-----PYEV 56
G ++A L+ +Y C+ + A ++FDR+ +R++ W+ +I YA +G +
Sbjct: 288 GLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDE 347
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
+L R+ G+ P+ TF L+AC+A A+E+GR+IH ++ + +E D + A+ +
Sbjct: 348 VFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFN 407
Query: 117 MYAK-------------------------------CSCVVNARQVFDKILERD------- 138
MYAK C + +A +VF ++ R+
Sbjct: 408 MYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLM 467
Query: 139 --------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
P T++T++ A +A L +G+ +H + +
Sbjct: 468 IAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGL 527
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
E + V T+L+ MY+KCG V AR +F+++ + V+WNAM+ GY HG +A+DLF++
Sbjct: 528 ESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKR 587
Query: 233 M-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
M K+ V P+ IT V+SACSR GL EGR F M D+ + P QHY CMVDLLG +G
Sbjct: 588 MLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAG 647
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSN 351
RL EA + I M +PD VW ALL +CK H +V+LAE A ++ELEP A Y+ LSN
Sbjct: 648 RLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSN 707
Query: 352 IYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKW 411
IYA+A W+ K+R++M DRG+KK S IE+ + H F++ D +HP D I+A+L+
Sbjct: 708 IYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELET 767
Query: 412 LEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKI 471
L MKEAGY P V HDV++ +K +C HSE+LAIA+GL+ TP GT + I KNL++
Sbjct: 768 LTKEMKEAGYTPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLRV 827
Query: 472 CDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
C DCH A KFISKI +REI RD NR+H+F +G CSCGD+W
Sbjct: 828 CGDCHTATKFISKIRKREIVARDANRFHYFNNGTCSCGDFW 868
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 177/393 (45%), Gaps = 72/393 (18%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG +AT L+ +YS C + A ++F ++ +RN+ W +I+A A + A EL
Sbjct: 186 MGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFEL 245
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
Y ++L+ G+ P+ TF L +C+ A+ GRRIH + ETD+ V ALI MY K
Sbjct: 246 YEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCK 305
Query: 121 CSCVVNARQVFDKILERD--------------------------------------PSEA 142
C+ V AR++FD++ +RD P++
Sbjct: 306 CNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKV 365
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T ++++ A AL QGR++H + FEL+ ++TA+ +MYAKCG + A +F ++
Sbjct: 366 TFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKM 425
Query: 203 REK-------------------------------RVVSWNAMITGYAMHGHSTKALDLFE 231
K VVSWN MI GYA +G K +L
Sbjct: 426 ANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLS 485
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
MK E QPD +T + +L AC + G++ V+ ++ T ++ +
Sbjct: 486 SMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVK-LGLESDTVVATSLIGMYSKC 544
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
G++ EA + +M + D W A+L HG
Sbjct: 545 GQVAEARTVFDKMSNR-DTVAWNAMLAGYGQHG 576
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 177/357 (49%), Gaps = 43/357 (12%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G L L++ YS + + +A Q+F R+ R++ W+ +I AYA N A +
Sbjct: 85 LGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDT 144
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+ + + P+ TF LKAC+ S +E+GR+IH V ETDV V ALI MY+K
Sbjct: 145 FERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSK 204
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + A +VF K+ ER+ P+ T V++
Sbjct: 205 CGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSL 264
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+++ AL +GR +H E ++ V AL+ MY KC V+ AR +F+++ ++ V
Sbjct: 265 LNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDV 324
Query: 208 VSWNAMITGYAMHGHSTK-----ALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR 261
+SW+AMI GYA G+ K L E+M+ E V P+ +TF+ +L AC+ G ++GR
Sbjct: 325 ISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGR 384
Query: 262 MFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
+ + + +D S+Q T + ++ G + EA + +M K + W + L+
Sbjct: 385 QIHAELSKVGFELDRSLQ--TAIFNMYAKCGSIYEAEQVFSKMANK-NVVAWTSFLS 438
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 169/382 (44%), Gaps = 80/382 (20%)
Query: 52 GPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG 111
G AI+L + + GL+ ++ T+ ++ C+ E+G+ +H+ + E D+++G
Sbjct: 35 GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLG 94
Query: 112 AALIDMYAKCSCVVNARQVFDKILERD--------------------------------- 138
+LI+ Y+K V +A QVF ++ RD
Sbjct: 95 NSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIE 154
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P+ T ++++ A + + L +GR++H E +V V TAL+ MY+KCG + VA +
Sbjct: 155 PNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEV 214
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLF 257
F ++ E+ VVSW A+I A H +A +L+E+M + + P+ +TFV +L++C+
Sbjct: 215 FHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEAL 274
Query: 258 DEGR---------------MFFESMVRDYHIDPSVQH---------------YTCMVDLL 287
+ GR + +++ Y SVQ ++ M+
Sbjct: 275 NRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGY 334
Query: 288 GHSG-----RLDEACDLIMQMR---VKPDPGVWGALLNSCKLHG--------HVKLAELA 331
SG +DE L+ +MR V P+ + ++L +C HG H +L+++
Sbjct: 335 AQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVG 394
Query: 332 LEKLIELEPHDAGNYVILSNIY 353
E L+ Y +IY
Sbjct: 395 FELDRSLQTAIFNMYAKCGSIY 416
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G V+AT L+ +YS C + A +FD++ R+ WN ++ Y +G A++L
Sbjct: 525 LGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDL 584
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRI 95
+ R+L+ + P+ T + ACS ++EGR I
Sbjct: 585 FKRMLKERVSPNEITLTAVISACSRAGLVQEGREI 619
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/539 (40%), Positives = 325/539 (60%), Gaps = 35/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ +Y+ + A +FDR+ +R+L WN +I YA N A ++ + + G
Sbjct: 198 VGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAG 257
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK-WETDVFVGAALIDMYAKCSCVVNA 127
L D T L AC+ L A++EG+ IH +RN + F +LI+MY C+C+V+A
Sbjct: 258 LFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDA 317
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
R++F+++ +D P + T + V+ A I
Sbjct: 318 RRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQI 377
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
AAL G +H + + F+ N V TALVDMY+KCG + +R +F+++ +K +VSW+AM+
Sbjct: 378 AALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMV 437
Query: 215 TGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
GY +HG +A+ + + MK + V PD+ F +LSACS GL EG+ F M ++Y++
Sbjct: 438 AGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNV 497
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P++ HY+CMVDLLG +G LDEA +I M +KP +W ALL + +LH ++KLAE++ +
Sbjct: 498 KPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQ 557
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
K+ ++ P +Y+ LSNIYA W+ V ++R ++ +G+KKS CS+IE+ N H FL
Sbjct: 558 KVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFL 617
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD SH ++IYAKL L+ ++KEAGY P T VF+DVE + K M+ HSERLAIAF
Sbjct: 618 VGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSERLAIAFA 677
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LINT GT + ITKNL++C DCH K IS++T REI +RD++R+HHF G CSCGDYW
Sbjct: 678 LINTGPGTVIRITKNLRVCGDCHTVTKLISELTGREIIMRDIHRFHHFIKGFCSCGDYW 736
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 137/423 (32%), Positives = 208/423 (49%), Gaps = 72/423 (17%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L TKL Y+ C + A +FD I +N FLWN +IR YA NG ++ LY +L G
Sbjct: 97 LNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFG 156
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
DNFT+PF LKAC L +E GRR+H +V+ E+D++VG +L+ MYAK + AR
Sbjct: 157 QRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTAR 216
Query: 129 QVFDKILERDPSE---------------------------------ATLVTVISASADIA 155
VFD++ ERD + TL+ ++SA AD+
Sbjct: 217 MVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLK 276
Query: 156 ALPQGRELHGFSWRHRF-ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
A+ +G+ +HG++ R+ N +L++MY C + AR LFE++R K VSWN+MI
Sbjct: 277 AVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMI 336
Query: 215 TGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACS-----RGGL----------FD 258
GYA +G + ++L LF +M D PD +TF+ VL AC R G+ FD
Sbjct: 337 LGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFD 396
Query: 259 EGRMFFESMVRDYH---------------IDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
+ ++V Y D S+ ++ MV G GR EA ++ M
Sbjct: 397 ANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGM 456
Query: 304 R---VKPDPGVWGALLNSCKLHGHV---KLAELALEKLIELEPHDAGNYVILSNIYARAA 357
+ V PD GV+ ++L++C G V K +EK ++P +Y + ++ RA
Sbjct: 457 KANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPA-LSHYSCMVDLLGRAG 515
Query: 358 NWE 360
+ +
Sbjct: 516 HLD 518
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 19/195 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + ++ T LV +YS C L + ++FD +P ++L W+ ++ Y +G AI +
Sbjct: 394 GFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISIL 453
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAAL------I 115
+ ++PDN F L ACS + EG+ I K E + V AL +
Sbjct: 454 DGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFY-----KMEKEYNVKPALSHYSCMV 508
Query: 116 DMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELN 175
D+ + + A V + +E P+ +++AS L + +L S + F++N
Sbjct: 509 DLLGRAGHLDEA-YVIIRTMEIKPTSDIWAALLTAS----RLHKNIKLAEISAQKVFDMN 563
Query: 176 VKVKTA---LVDMYA 187
KV ++ L ++YA
Sbjct: 564 PKVVSSYICLSNIYA 578
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Query: 147 VISASADIAALPQGRELHGFSWRHR-FELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
++ + + + QG++LH E N + T L YA CGL+ A +F+ + K
Sbjct: 65 LLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLK 124
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGR 261
WN MI GYA +G K+L L+ +M Q D+ T+ VL AC L + GR
Sbjct: 125 NSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGR 181
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/527 (41%), Positives = 316/527 (59%), Gaps = 34/527 (6%)
Query: 20 CDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFA 79
C + A +LF+ + R+ W ++ + NG A+ + R+ G+ D +TF
Sbjct: 219 CKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSI 278
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI----- 134
L AC ALSA+E+G++IH +IR ++ +VFVG+AL+DMY+KC + A F ++
Sbjct: 279 LTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNI 338
Query: 135 -------------------------LERD---PSEATLVTVISASADIAALPQGRELHGF 166
++RD P + TL +VIS+ A++A+L +G + H
Sbjct: 339 ISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCL 398
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ + V ALV +Y KCG ++ A LF+++ VSW A++TGYA G + +
Sbjct: 399 ALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKET 458
Query: 227 LDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
+DLFEKM +V+PD +TF+GVLSACSR G ++G +F SM +D+ I P HYTCM+D
Sbjct: 459 IDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMID 518
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGN 345
L SGRL EA + I QM + PD WG LL++C+L G +++ + A E L+E++P + +
Sbjct: 519 LYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPAS 578
Query: 346 YVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEI 405
YV+L +++A NW VA+LR+ M DR +KK CSWI+ KNK H F + D SHP I
Sbjct: 579 YVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKGI 638
Query: 406 YAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLI 465
Y KL+WL +M E GY P SV HDV + +K +M+ HSE+LAIAFGL+ P + I
Sbjct: 639 YEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLMFVPHEMPIRI 698
Query: 466 TKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
KNL++C DCH A K ISKIT R+I VRD R+H F +G+CSCGD+W
Sbjct: 699 VKNLRVCVDCHNATKLISKITGRDILVRDAVRFHKFSNGVCSCGDFW 745
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 153/352 (43%), Gaps = 75/352 (21%)
Query: 6 HPVLAT--KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
HP L T L+ + L + LF + QR+ +N +I ++ G + A+ LY+
Sbjct: 69 HPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHT 128
Query: 64 LLEIG--LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
LL G + P T + A SAL GR+ H ++R + + FVG+ L+ MYAK
Sbjct: 129 LLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKM 188
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
+ +A++VFD++ G+ NV +
Sbjct: 189 GLIGDAKRVFDEM------------------------DGK-------------NVVMYNT 211
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPD 240
++ +C +V+ AR LFE + ++ ++W M+TG+ +G ++AL+ F +M+ + + D
Sbjct: 212 MITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAID 271
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHID-------------------------- 274
TF +L+AC ++G+ ++R ++ D
Sbjct: 272 QYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFR 331
Query: 275 ----PSVQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWGALLNSC 319
++ +T ++ G +G +EA + +M+ + PD G++++SC
Sbjct: 332 RMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSC 383
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + ++ LV LY C + +AH+LFD + + W L+ YA G + I+L+
Sbjct: 403 GLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLF 462
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
++L + PD TF L ACS +E+G
Sbjct: 463 EKMLAKDVKPDGVTFIGVLSACSRAGFVEKG 493
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/533 (40%), Positives = 313/533 (58%), Gaps = 33/533 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ +Y+ C L A +FD + R + W LI AYA G + AI L++ + G+ PD
Sbjct: 39 LLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPD 98
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF- 131
FT L AC+ ++E G+ +H + N ++++FV AL+DMYAKC + +A VF
Sbjct: 99 IFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFL 158
Query: 132 -------------------------------DKILERDPSEATLVTVISASADIAALPQG 160
D +LE P TL ++ A A +A+L +G
Sbjct: 159 EMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLEMKPDGTTLACILPACASLASLDRG 218
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMH 220
+E+HG R+ F + +V ALVDMY KCG+ +AR LF+ + K +++W MI GY MH
Sbjct: 219 KEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMH 278
Query: 221 GHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQH 279
G A+ F +M+ ++PD ++F+ +L ACS GL DEG FF M + ++ P ++H
Sbjct: 279 GFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEH 338
Query: 280 YTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
Y C+VDLL SG+L A I M ++PD +WGALL+ C++H VKLAE E + ELE
Sbjct: 339 YACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELE 398
Query: 340 PHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASH 399
P + G YV+L+N YA A WE V KLR+ + RG+KK+ CSWIEVK+K H FL+G++SH
Sbjct: 399 PENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSH 458
Query: 400 PNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPD 459
P +I LK L +MKE GY P T + ++ +K +C HSE+LA+AFG++N P
Sbjct: 459 PQAKKIEVLLKRLRSKMKEEGYFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPP 518
Query: 460 GTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ ++KNL++C DCH KFISK REI +RD NR+HHFKDG+C C +W
Sbjct: 519 ARTIRVSKNLRVCGDCHEMAKFISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF +A LV +Y C A LFD IP ++L W V+I Y +G AI +
Sbjct: 229 GFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTF 288
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRR 94
+ + G+ PD +F L ACS ++EG R
Sbjct: 289 NEMRQAGIEPDEVSFISILYACSHSGLLDEGWR 321
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/540 (40%), Positives = 327/540 (60%), Gaps = 34/540 (6%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P + L+ +Y+ C + +A +F+ IP ++ LW+ LI YA + E A E++ R++
Sbjct: 286 PHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMR 345
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
+VP+ F+ L+AC+ ++ ++ G++IH VI+ +E+++FVG AL+D+YAKC + N
Sbjct: 346 SSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMEN 405
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISASAD 153
+ ++F + + + ++ T +V+ A A+
Sbjct: 406 SLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACAN 465
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
A++ ++H + F + V +L+D YAKCG ++ A +FE + + VVSWNA+
Sbjct: 466 TASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAI 525
Query: 214 ITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I+GYA+HG +T AL+LF +M K + +P+ +TFV +LS C GL ++G F SM D+
Sbjct: 526 ISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHR 585
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I PS+ HYTC+V LLG +GRL++A I + P P VW ALL+SC +H +V L + +
Sbjct: 586 IKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSA 645
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
EK++E+EP D YV+LSN+YA A + VA LRK M + G+KK + SW+E+K + HAF
Sbjct: 646 EKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAF 705
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
G A HP+ I A L+WL + GYVP V HDV+ +EKA M+ HSERLA+A+
Sbjct: 706 SVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAY 765
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
GL TP G + I KNL+ C DCH K ISKI +REI VRD+NR+HHF +GICSCGDYW
Sbjct: 766 GLSMTPPGHPIRIMKNLRSCLDCHTVFKVISKIVQREIVVRDINRFHHFDEGICSCGDYW 825
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 185/414 (44%), Gaps = 38/414 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + + L+ YS C + +A +FD I ++ W ++ Y+ N E A+
Sbjct: 179 LGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNT 238
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ G P+ F LKA LS+ G+ IH ++ +T+ VG AL+DMYAK
Sbjct: 239 FSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAK 298
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + +AR VF+ I D P+E +L V
Sbjct: 299 CGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGV 358
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A A++A L G+++H + +E + V AL+D+YAKC ++ + +F LR+
Sbjct: 359 LQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANE 418
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSWN +I GY G + AL +F++M+ V +TF VL AC+ + S
Sbjct: 419 VSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKH-TVQIHS 477
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
++ + ++D G + +A + + ++ D W A+++ LHG
Sbjct: 478 LIEKSTFNNDTIVCNSLIDTYAKCGCIRDALK-VFESIIQCDVVSWNAIISGYALHGRAT 536
Query: 327 LAELALEKL--IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
A ++ + +P+D +LS + +G++ + +D IK S+
Sbjct: 537 DALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSM 590
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 141/294 (47%), Gaps = 34/294 (11%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
A L++LY+ L A +LFD +P+RN+ + L++ YA G +E A L+ RL G
Sbjct: 87 ANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGH 146
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
++F LK A+ A IH + + + FVG++LID Y+ C V +AR
Sbjct: 147 EVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARC 206
Query: 130 VFDKILERD---------------------------------PSEATLVTVISASADIAA 156
VFD I+ +D P+ L +V+ A+ +++
Sbjct: 207 VFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSS 266
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
G+ +HG + + + V AL+DMYAKCG ++ AR +FE + V+ W+ +I+
Sbjct: 267 AVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISR 326
Query: 217 YAMHGHSTKALDLFEK-MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
YA + +A ++F + M+ V P+ + GVL AC+ D G+ +++
Sbjct: 327 YAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIK 380
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 42/229 (18%)
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYAKCSCVVNARQ 129
D++ L+ C A GR +H V++ + D F L+++YAK + AR+
Sbjct: 46 DSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARR 105
Query: 130 VFDKILERDPSEATLVTVISASA------DIAAL-----PQGRE---------------- 162
+FD + ER+ + VT++ A + A L +G E
Sbjct: 106 LFDGMPERN--MVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAM 163
Query: 163 --------LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
+H + + + N V ++L+D Y+ CG V AR +F+ + K V+W AM+
Sbjct: 164 DAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMV 223
Query: 215 TGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSA--CSRGGLFDEG 260
+ Y+ + AL+ F KM+ +P+ VL A C + +G
Sbjct: 224 SCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKG 272
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 41/226 (18%)
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
+L+ L+++YAK G + AR LF+ + E+ +VS+ ++ GYA+ G +A LF +
Sbjct: 81 QLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRR 140
Query: 233 MKDEV-QPDHI---TFVGVLSACSRGGL------------FDEGRMFFESMVRDYHIDPS 276
++ E + +H T + VL A GL D S++ Y + +
Sbjct: 141 LQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGA 200
Query: 277 VQH---------------YTCMVDLLGHSGRLDEACDLIMQMRV---KPDPGVWGALLNS 318
V H +T MV + ++A + +MR+ KP+P V ++L +
Sbjct: 201 VSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKA 260
Query: 319 CKLHGHVKLAE----LALEKLIELEPHDAGNYVILSNIYARAANWE 360
L + A++ L + EPH G L ++YA+ E
Sbjct: 261 AVCLSSAVLGKGIHGCAVKTLCDTEPHVGG---ALLDMYAKCGYIE 303
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/538 (40%), Positives = 321/538 (59%), Gaps = 36/538 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y + CL +A +LFD IP +++ WN +I Y +G +E AI +Y + E ++
Sbjct: 201 TALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVL 260
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
P+ T L AC + E G+ I V N + +++ + ALIDMY KC AR++
Sbjct: 261 PNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIAREL 320
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
FD I E+D P++ T + ++ A A + AL
Sbjct: 321 FDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGAL 380
Query: 158 PQGRELHGFSWRH-RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
G+ +H + ++ R N + T+L+DMYAKCG ++ A +F + + + SWNAM++G
Sbjct: 381 DLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSG 440
Query: 217 YAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
+AMHGH+ +AL LF +M K +PD ITFVGVLSAC++ GL D G +F SM++DY I
Sbjct: 441 FAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGIS 500
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P +QHY CM+DLL + + +EA L+ M ++PD +WG+LL++CK HG V+ E E+
Sbjct: 501 PKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAER 560
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L +LEP +AG +V+LSNIYA A W+ VA++R + D+G+KK C+ IE+ H FL
Sbjct: 561 LFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLV 620
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD HP C+ IY L ++ ++E G+VP T V +D++ + K + HSE+LAI+FGL
Sbjct: 621 GDKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGL 680
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I T GT + I KNL++C +CH A K ISKI REI RD NR+HHFKDG CSC D W
Sbjct: 681 IKTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 183/445 (41%), Gaps = 78/445 (17%)
Query: 9 LATKLVHL--YSACDCLHNAHQLFDRIPQR---NLFLWNVLIRAYAWNGPYEVAIELYYR 63
+ +KL+H S L A LF+ Q N+F+WN LIR Y+ + ++ L+ R
Sbjct: 62 VQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSR 121
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
+L G+ P++ TFPF K+C+ A EG+++H ++ + V ++I MYA
Sbjct: 122 MLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGE 181
Query: 124 VVNARQVFDKILERDPSEATLVTVISASADIAALPQGREL----------------HGFS 167
+ AR VFDK RD + +I+ L R L G+
Sbjct: 182 MDFARLVFDKSSLRDA--VSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYV 239
Query: 168 WRHRFELNV------------KVKTALVDMYAKCGLVK---------------------- 193
RFE + K+ +V + + CG +
Sbjct: 240 QSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQ 299
Query: 194 ----------------VARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDE 236
+AR LF+ + EK V+SWN MI GY+ +AL LFE M +
Sbjct: 300 LTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSN 359
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
V+P+ +TF+G+L AC+ G D G+ + ++ + +T ++D+ G ++ A
Sbjct: 360 VKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAA 419
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE---LEPHDAGNYVILSNIY 353
+ M + + W A+L+ +HGH + A +++ P D +LS
Sbjct: 420 ERVFRSMHSR-NLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACT 478
Query: 354 ARAANWEGVAKLRKLMIDRGIKKSI 378
G R ++ D GI +
Sbjct: 479 QAGLVDLGHQYFRSMIQDYGISPKL 503
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/553 (41%), Positives = 335/553 (60%), Gaps = 47/553 (8%)
Query: 5 FHPVLATKLVHLYSACDCLHN---------AHQLFDRIPQRNLFLWNVLIRAYAWNGPYE 55
FHP L+ +H + HN +LFDR+P R++ WN +I A NG YE
Sbjct: 124 FHPHLSP--LHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYE 181
Query: 56 VAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALI 115
A+ + + + L PD+FT L + + + +G+ IH IR+ ++ DVF+G++LI
Sbjct: 182 EALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLI 241
Query: 116 DMYAKCS--------------------------CVVNAR-----QVFDKILERD--PSEA 142
DMYAKC+ CV N R F ++L+ P +
Sbjct: 242 DMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQV 301
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
+ +VI A A + AL G++LH + R F+ N + ++L+DMYAKCG +K+AR +F ++
Sbjct: 302 SFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKI 361
Query: 203 R--EKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDE 259
++ +VSW A+I G AMHGH+ A+ LFE+M D V+P ++ F+ VL+ACS GL DE
Sbjct: 362 EMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDE 421
Query: 260 GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC 319
G +F SM RD+ + P ++HY + DLLG +GRL+EA D I M +P VW LL +C
Sbjct: 422 GWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAAC 481
Query: 320 KLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIA 379
+ H +++LAE + K++ ++P + G +VI+SNIY+ A W AKLR M G+KK+ A
Sbjct: 482 RAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPA 541
Query: 380 CSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKAN 439
CSWIEV NK H FL+GD SHP D+I L L +M++ GYV T V HDV+ + K +
Sbjct: 542 CSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTNEVLHDVDEEHKRD 601
Query: 440 MICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYH 499
++ HSERLAIAFG+I+T GT + + KN+++C DCH AIKF++KI REI VRD +R+H
Sbjct: 602 LLRTHSERLAIAFGIISTTSGTTIRVIKNIRVCVDCHTAIKFMAKIVGREIIVRDNSRFH 661
Query: 500 HFKDGICSCGDYW 512
HFK+G CSCGDYW
Sbjct: 662 HFKNGSCSCGDYW 674
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 157/353 (44%), Gaps = 58/353 (16%)
Query: 41 WNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVI 100
W +I+ YA +G ++ + L G+ PD FP L+A + + +H VI
Sbjct: 44 WICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVI 103
Query: 101 RNKWETDVFVGAALIDMYAK----------------------CSCVVNARQVFDKILERD 138
R + D++ AL++MY+K + + R++FD++ RD
Sbjct: 104 RLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRD 163
Query: 139 ---------------------------------PSEATLVTVISASADIAALPQGRELHG 165
P TL +++ + A + +G+E+HG
Sbjct: 164 VVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHG 223
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
++ RH F+ +V + ++L+DMYAKC V+++ F L + +SWN++I G +G +
Sbjct: 224 YAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQ 283
Query: 226 ALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMV 284
L F +M K++V+P ++F V+ AC+ + G+ ++R D + + ++
Sbjct: 284 GLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIR-LGFDDNKFIASSLL 342
Query: 285 DLLGHSGRLDEACDLIMQMRV-KPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
D+ G + A + ++ + D W A++ C +HGH A E+++
Sbjct: 343 DMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEML 395
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/538 (40%), Positives = 319/538 (59%), Gaps = 34/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+++Y C L +A+++F + RN+ W +I +A G A EL++++ G
Sbjct: 624 LGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDG 683
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P TF LKAC + + ++EG+++ ++ + +E D VG ALI Y+K + +AR
Sbjct: 684 FKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDAR 743
Query: 129 QVFDKILERDP---------------------------------SEATLVTVISASADIA 155
+VFDK+ RD ++ + V++++A + +
Sbjct: 744 KVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFS 803
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL +G+ +H + + + +V+V AL+ MYAKCG ++ A+ +F+ EK VV+WNAMI
Sbjct: 804 ALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMIN 863
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
YA HG ++KALD F M K+ ++PD TF +LSAC+ GL EG F S+ + +
Sbjct: 864 AYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLS 923
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P+++HY C+V LLG +GR EA LI QM PD VW LL +C++HG+V LAE A
Sbjct: 924 PTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANN 983
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
++L + YV+LSN+YA A W+ VAK+R++M RGI+K SWIEV N H F++
Sbjct: 984 ALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIA 1043
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
D SHP EIY +LK L M+ AGY P T+ V H+++ + + +C HSERLAIA+GL
Sbjct: 1044 ADRSHPETAEIYEELKRLSLEMERAGYSPDTQYVLHNLDKEHQETSLCTHSERLAIAYGL 1103
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ TP GT + I KNL+IC DCH A KFISK+ REI RD NR+H FK+G CSC D+W
Sbjct: 1104 LKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHTFKNGKCSCEDFW 1161
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 160/330 (48%), Gaps = 37/330 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ +Y+ C L A +LF+ +P+R+L WN +I YA A++LY ++ G
Sbjct: 422 IGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEG 481
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P TF L AC+ SA +G+ IHED++R+ +++ + AL++MY +C ++ A+
Sbjct: 482 VKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQ 541
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
VF+ RD P + T +V+ +
Sbjct: 542 NVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPE 601
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL GR++H +L+V + AL++MY +CG ++ A +F LR + V+SW AMI
Sbjct: 602 ALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIG 661
Query: 216 GYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD-YHI 273
G+A G KA +LF +M+ D +P TF +L AC DEG+ ++ Y +
Sbjct: 662 GFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYEL 721
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
D V + ++ SG + +A + +M
Sbjct: 722 DTGVGN--ALISAYSKSGSMTDARKVFDKM 749
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 163/349 (46%), Gaps = 36/349 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G G L+ L+++Y C + +AHQ+F ++P+R++ WN LI YA G + A +L+
Sbjct: 112 GVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLF 171
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G +P T+ L AC + + +E G++IH +I ++ D V +L++MY KC
Sbjct: 172 EEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKC 231
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +ARQVF I RD P + T + ++
Sbjct: 232 EDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLL 291
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A + L +G+ +H + +++V TAL M+ +CG V A+ E ++ VV
Sbjct: 292 DAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVV 351
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+NA+I A HGH +A + + +M+ D V + T++ VL+ACS G + S
Sbjct: 352 VYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGEL-IHSH 410
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
+ + VQ ++ + G L A +L M K D W A++
Sbjct: 411 ISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTM-PKRDLISWNAII 458
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 199/413 (48%), Gaps = 45/413 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ P + L+++Y C+ L +A Q+F I +R++ +N ++ YA E I L+
Sbjct: 213 GYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLF 272
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ G+ PD T+ L A + S ++EG+RIH+ + +D+ VG AL M+ +C
Sbjct: 273 GQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRC 332
Query: 122 SCVVNARQVFDKILERDP---------------------------------SEATLVTVI 148
V A+Q + +RD + T ++V+
Sbjct: 333 GDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVL 392
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A + AL G +H +V++ +L+ MYA+CG + AR LF + ++ ++
Sbjct: 393 NACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLI 452
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNA+I GYA +A+ L+++M+ E V+P +TF+ +LSAC+ + +G+M E +
Sbjct: 453 SWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDI 512
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+R I + ++++ G + EA ++ R + D W +++ HG +
Sbjct: 513 LRS-GIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRAR-DIISWNSMIAGHAQHGSYEA 570
Query: 328 A-ELALEKLIE-LEPHDAGNYVILSNIYARAANWEGVAKLRK---LMIDRGIK 375
A +L LE E LEP + + +++ N E + R+ L+I+ G++
Sbjct: 571 AYKLFLEMKKEGLEP----DKITFASVLVGCKNPEALELGRQIHMLIIESGLQ 619
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 174/422 (41%), Gaps = 90/422 (21%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
++ C+ ++ E +RIH ++ D+F+ LI+MY KC V +A QVF K+ RD
Sbjct: 89 VQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDV 148
Query: 139 --------------------------------PSEATLVTVISASADIAALPQGRELHGF 166
PS+ T +++++A A L G+++H
Sbjct: 149 ISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSK 208
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
++ + +V+ +L++MY KC + AR +F + + VVS+N M+ YA + +
Sbjct: 209 IIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEEC 268
Query: 227 LDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF-----ESMVRDYHI------- 273
+ LF +M E + PD +T++ +L A + + DEG+ E + D +
Sbjct: 269 IGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATM 328
Query: 274 ------------------DPSVQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVW 312
D V Y ++ L G +EA + QMR V + +
Sbjct: 329 FVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTY 388
Query: 313 GALLNSCKLHGHVKLAELALEKLIELEPHDA----GNYVILSNIYARAANWEGVAKLRKL 368
++LN+C + EL + E+ H + GN +I ++YAR + +L
Sbjct: 389 LSVLNACSTSKALGAGELIHSHISEV-GHSSDVQIGNSLI--SMYARCGDLPRARELFNT 445
Query: 369 MIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESV 428
M R + SW +A ++G A + E K +M+ G PG +
Sbjct: 446 MPKRDL-----ISW-------NAIIAGYARREDRGEAMKLYK----QMQSEGVKPGRVTF 489
Query: 429 FH 430
H
Sbjct: 490 LH 491
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 114/261 (43%), Gaps = 17/261 (6%)
Query: 128 RQVFDKILERDPSE---ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVD 184
R+ + P+E A V ++ +L + + +H ++ + L++
Sbjct: 66 REDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLIN 125
Query: 185 MYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHIT 243
MY KC V A +F ++ + V+SWN++I+ YA G KA LFE+M+ P IT
Sbjct: 126 MYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKIT 185
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
++ +L+AC + G+ ++ Y DP VQ+ ++++ G L A +
Sbjct: 186 YISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQN--SLLNMYGKCEDLPSARQVFSG 243
Query: 303 MRVKPDPGVWGALLNSCKLHGHVK-----LAELALEKLIELEPHDAGNYVILSNIYARAA 357
+ + D + +L +V+ +++ E + P D Y+ L + + +
Sbjct: 244 I-YRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGI----PPDKVTYINLLDAFTTPS 298
Query: 358 NWEGVAKLRKLMIDRGIKKSI 378
+ ++ KL ++ G+ I
Sbjct: 299 MLDEGKRIHKLAVNEGLNSDI 319
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/524 (40%), Positives = 317/524 (60%), Gaps = 34/524 (6%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L + ++FD +P++++ WN L+ A +G + A+ L + G PD+FT L
Sbjct: 123 LESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPI 182
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---- 138
+ + + G +H RN + DVFVG++LIDMYA C+ + +VFD + RD
Sbjct: 183 FAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILW 242
Query: 139 -----------------------------PSEATLVTVISASADIAALPQGRELHGFSWR 169
P T ++I A ++A+L G++LH + R
Sbjct: 243 NSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIR 302
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
F+ NV + ++L+DMY KCG V +AR +F++++ +VSW AMI G+A+HG + +AL L
Sbjct: 303 GGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVL 362
Query: 230 FEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
F++M+ ++P+HITF+ VL+ACS GL D+G +F SM Y I PS++H+ + D LG
Sbjct: 363 FDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLG 422
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
G+L+EA + I M++KP VW LL +CK+H + LAE +K+ +LEP G+++I
Sbjct: 423 RPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHII 482
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAK 408
LSN Y+ + W A LRK M +G++K ACSWIEVKNK H F++ D SHP + I
Sbjct: 483 LSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDA 542
Query: 409 LKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKN 468
L +M GYVP T+ VF D+E ++K +++C HSE+LAI FG+I+TP GT + + KN
Sbjct: 543 LNVFSEQMVRQGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVMKN 602
Query: 469 LKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L++C DCH KFISKI REI +RD NR+HHFKDGICSCGD+W
Sbjct: 603 LRVCVDCHTVTKFISKIVGREIVMRDANRFHHFKDGICSCGDFW 646
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 152/347 (43%), Gaps = 54/347 (15%)
Query: 41 WNVLIRAYAWNGPYEVAIELYYRLLE----IGLVPDNFTFPFALKACSALSAIEEGRRIH 96
W IR A G + AI L+ R+ + P ALK+C+AL G +H
Sbjct: 22 WAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASLH 81
Query: 97 EDVIRNKWETDVFVGAALIDMYAKC------------SCVV--NARQVFDKILERD---- 138
+R+ D F AL+++Y K S VV + R+VFD++ E+D
Sbjct: 82 ALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSW 141
Query: 139 -----------------------------PSEATLVTVISASADIAALPQGRELHGFSWR 169
P TL +V+ A+ A + +G ELHGF+ R
Sbjct: 142 NTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATR 201
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
+ F +V V ++L+DMYA C + +F+ L + + WN+M+ G A +G +AL L
Sbjct: 202 NGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGL 261
Query: 230 FEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
F +M ++P +TF ++ AC G+ ++R D +V + ++D+
Sbjct: 262 FRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRG-GFDGNVFISSSLIDMYC 320
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
G + A + +++ PD W A++ LHG + A + +++
Sbjct: 321 KCGNVSIARRIFDRIQ-SPDIVSWTAMIMGHALHGPAREALVLFDRM 366
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 105/248 (42%), Gaps = 32/248 (12%)
Query: 103 KWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEA---TLVTVISASADIAAL-- 157
W + V A+ D + +A +F ++ DP+ A L ++ A AAL
Sbjct: 21 SWAHQIRVAASQGDFH-------HAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGL 73
Query: 158 -PQGRELHGFSWRHRFELNVKVKTALVDMYAKCG--------------LVKVARNLFEQL 202
G LH + R + AL+++Y K +++ R +F+++
Sbjct: 74 RALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEM 133
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGR 261
EK VVSWN ++ G A G +AL L +M +D +PD T VL + G G
Sbjct: 134 PEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGM 193
Query: 262 MFFESMVRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
R+ +H D V + ++D+ + R D + + + V+ D +W ++L C
Sbjct: 194 ELHGFATRNGFHDDVFVG--SSLIDMYANCTRTDYSVKVFDNLPVR-DAILWNSMLAGCA 250
Query: 321 LHGHVKLA 328
+G V A
Sbjct: 251 QNGSVDEA 258
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + +++ L+ +Y C + A ++FDRI ++ W +I +A +GP A+ L+
Sbjct: 304 GFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLF 363
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
R+ L P++ TF L ACS +++G
Sbjct: 364 DRMELGNLKPNHITFLAVLTACSHAGLVDKG 394
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/546 (40%), Positives = 326/546 (59%), Gaps = 35/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G H + T L+ LYS C + +A LFDR+ +L +N LI Y+ NG E ++EL+
Sbjct: 242 GLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELF 301
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
L G P++ T + S R +H V++ + + D V AL +Y +
Sbjct: 302 KELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRL 361
Query: 122 SCVVNARQVFDKILER---------------------------------DPSEATLVTVI 148
+ + +AR +FD +LE+ P+ T+ + +
Sbjct: 362 NDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTL 421
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A + AL G+ +H + + ELNV V TAL+DMYAKCG + AR++F+++ K VV
Sbjct: 422 SACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVV 481
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNAMI+GY +HG +AL L++ M D + P TF+ V+ ACS GGL DEG+ F M
Sbjct: 482 SWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVM 541
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM-RVKPDPGVWGALLNSCKLHGHVK 326
+Y I P ++H TCMVDLLG +G+L+EA +LI + + PGVWGALL +C +H +
Sbjct: 542 TNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSD 601
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
LA+LA +KL EL+ +AG YV+LSN+Y ++ A +R+ R + K+ C+ IE+
Sbjct: 602 LAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIG 661
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
++ H F++GD HP + IY+ L+ L +M EAGY P TE+ +DVE +EK +M+ HSE
Sbjct: 662 DRPHVFMAGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSE 721
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LAIAFGL++T GT + I KNL++C DCH A KFISK+T+R I VRD +R+HHF+DG+C
Sbjct: 722 KLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVC 781
Query: 507 SCGDYW 512
SCGDYW
Sbjct: 782 SCGDYW 787
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 168/358 (46%), Gaps = 41/358 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ +A+ L LY +A ++FD +P + LWN L+ P A+E +
Sbjct: 144 GYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGL----PGSEALEAF 199
Query: 62 YRLLEIGLV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
R+++ G V PD+ T +L+A + S + GR +H ++ V L+ +Y+K
Sbjct: 200 VRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSK 259
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + +A+ +FD++ D P+ +TLV V
Sbjct: 260 CGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAV 319
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
I + R LH F + R + + V TAL +Y + ++ AR++F+ + EK +
Sbjct: 320 IPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTM 379
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
SWNAMI+GYA +G + A+ LF+ M++ VQP+ IT LSAC+ G G+ +
Sbjct: 380 ESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGK-WVHR 438
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
++ ++ +V T ++D+ G + EA + +M K + W A+++ LHG
Sbjct: 439 IISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNK-NVVSWNAMISGYGLHGQ 495
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 197/453 (43%), Gaps = 91/453 (20%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAH--QLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+ P AT L+ Y++ +H +LF P + FL N L+R+ P+ +
Sbjct: 49 YALDPAPATALLLRYASLRA-PPSHLLRLFRAFPCPDRFLRNALLRSLPSLRPHLLFPS- 106
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIE-----EGRRIHEDVIRNKWETDVFVGAALI 115
PD+F+F FA + S+ + R +H + + D FV +AL
Sbjct: 107 ----------PDSFSFAFAATSLSSSCSSRGNDAAAARTLHGLSVAAGYAADTFVASALA 156
Query: 116 DMYAKCSCVVNARQVFDKILERD------------------------------PSEATLV 145
+Y K S +AR+VFD + D P TL
Sbjct: 157 KLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPGSEALEAFVRMVDAGRVRPDSTTLA 216
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+ + A+A+ + + GR +HG+ + + V T L+ +Y+KCG + A+ LF+++
Sbjct: 217 SSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNP 276
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDEV-QPDHITFVGVLSACSRGG--------- 255
+V++NA+I+GY+++G +++LF+++ +P+ T V V+ S G
Sbjct: 277 DLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLH 336
Query: 256 -LFDEGRMFFESMVR--------------------DYHIDPSVQHYTCMVDLLGHSGRLD 294
+ R+ +++V D ++ +++ + M+ +G +
Sbjct: 337 AFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTE 396
Query: 295 EAC---DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI--L 349
A L+ ++ V+P+P + L++C G + L + + ++I E + YV+ L
Sbjct: 397 MAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKW-VHRIISKEKLELNVYVMTAL 455
Query: 350 SNIYARAANWEGVAKLRKLMIDRGIKKSIACSW 382
++YA+ + +A+ R + DR K++ SW
Sbjct: 456 IDMYAKCGS---IAEARSI-FDRMDNKNV-VSW 483
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/545 (40%), Positives = 327/545 (60%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG H + L+H+Y+ C + A ++FD + +RN+ WN + Y +G +E ++L+
Sbjct: 154 GFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLF 213
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ +LE+ + D T L AC L+ +E G I+ V + + + +L+DMYAKC
Sbjct: 214 HEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKC 273
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
V AR++FD++ RD P+E T+V+++
Sbjct: 274 GQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSIL 333
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
S+ A + AL G+ +H F + R +L V + TAL+D YAKCG V+ + +F ++ K V+
Sbjct: 334 SSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVL 393
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SW +I G A +G KAL+ F M ++ V+P+ +TF+GVLSACS GL DEGR F SM
Sbjct: 394 SWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSM 453
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
RD+ I+P ++HY CMVD+LG +G ++EA I M ++P+ +W LL SCK+H +V++
Sbjct: 454 SRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEI 513
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E +L++LI LEP +G+Y++LSNIYA WE K+R M ++GIKK+ CS IE+
Sbjct: 514 GEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDG 573
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
H F + D H +EIY ++ + ++K AGYVP T D E D+K + + HSE+
Sbjct: 574 VIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEARLDAEEDDKESSVSHHSEK 633
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGLI +P GT + ITKNL++C DCH A K +SK+ REI VRD R+HHFK+G CS
Sbjct: 634 LAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVFNREIVVRDRTRFHHFKEGSCS 693
Query: 508 CGDYW 512
C DYW
Sbjct: 694 CNDYW 698
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 180/363 (49%), Gaps = 42/363 (11%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +F +I + + +N++IR + AI L+ + E + PD FTFP LK CS
Sbjct: 77 AVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSR 136
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP------ 139
L A+ EG +IH +++ + + FV LI MYA C V AR+VFD++ ER+
Sbjct: 137 LQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSM 196
Query: 140 ---------------------------SEATLVTVISASADIAALPQGRELHGFSWRHRF 172
E TLV+V++A +A L G ++ +
Sbjct: 197 FAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGL 256
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
+ N + T+LVDMYAKCG V AR LF+Q+ + VV+W+AMI+GY+ +ALDLF +
Sbjct: 257 KGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHE 316
Query: 233 M-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
M K + P+ IT V +LS+C+ G + G+ + ++ + +V T ++D G
Sbjct: 317 MQKANIDPNEITMVSILSSCAVLGALETGK-WVHFFIKKKRMKLTVTLGTALMDFYAKCG 375
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA----ELALEKLIELEPHDAGNYV 347
++ + ++ +M VK + W L+ +G K A L LEK +EP+D
Sbjct: 376 SVESSIEVFGKMPVK-NVLSWTVLIQGLASNGQGKKALEYFYLMLEK--NVEPNDVTFIG 432
Query: 348 ILS 350
+LS
Sbjct: 433 VLS 435
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/548 (40%), Positives = 333/548 (60%), Gaps = 41/548 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP-QRNLFLWNVLIRAYAWNGPYEVAIEL 60
GF F + T L+ YS C + +A +LF I N+ W +I + N E A++L
Sbjct: 325 GFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDL 384
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + G+ P+ FT+ L A +S E +H V++ +E VG AL+D Y K
Sbjct: 385 FSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVK 440
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
V A +VF I ++D P+E T ++
Sbjct: 441 LGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSI 500
Query: 148 ISA-SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ +A A++ QG++ HGF+ + R + ++ V +AL+ MYAK G ++ A +F++ REK
Sbjct: 501 LNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKD 560
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+VSWN+MI+GYA HG + KALD+F++MK +V+ D +TF+GV +AC+ GL +EG +F+
Sbjct: 561 LVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFD 620
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
MVRD I P+ +H +CMVDL +G+L++A +I M +W +L +C++H
Sbjct: 621 IMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKT 680
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+L LA EK+I ++P D+ YV+LSN+YA + +W+ AK+RKLM +R +KK SWIEV
Sbjct: 681 ELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEV 740
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
KNK ++FL+GD SHP D+IY KL+ L R+K+ GY P T V D++++ K ++ HS
Sbjct: 741 KNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHS 800
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF-KDG 504
ERLAIAFGLI TP G+ LLI KNL++C DCH+ IK I+KI EREI VRD NR+HHF DG
Sbjct: 801 ERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDG 860
Query: 505 ICSCGDYW 512
+CSCGD+W
Sbjct: 861 VCSCGDFW 868
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 162/363 (44%), Gaps = 43/363 (11%)
Query: 3 FGF--HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
FGF + T LV Y + ++FD + +RN+ W LI YA N + + L
Sbjct: 122 FGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTL 181
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+ G P++FTF AL + G ++H V++N + + V +LI++Y K
Sbjct: 182 FMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLK 241
Query: 121 CSCVVNARQVFDKILERDP---------------------------------SEATLVTV 147
C V AR +FDK + SE++ +V
Sbjct: 242 CGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASV 301
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-EKR 206
I A++ L +LH ++ F + ++TAL+ Y+KC + A LF+++
Sbjct: 302 IKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGN 361
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
VVSW AMI+G+ + +A+DLF +MK + V+P+ T+ +L+A + + +
Sbjct: 362 VVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP---VISPSEVHAQ 418
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
+ +Y +V T ++D G+++EA + + K D W A+L G
Sbjct: 419 VVKTNYERSSTVG--TALLDAYVKLGKVEEAAKVFSGIDDK-DIVAWSAMLAGYAQTGET 475
Query: 326 KLA 328
+ A
Sbjct: 476 EAA 478
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 127/264 (48%), Gaps = 34/264 (12%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L+NAH LFD+ P R+ + L+ ++ +G + A L+ + +G+ D F LK
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---- 138
+ L GR++H I+ + DV VG +L+D Y K S + R+VFD++ ER+
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 139 -----------------------------PSEATLVTVISASADIAALPQGRELHGFSWR 169
P+ T + A+ +G ++H +
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
+ + + V +L+++Y KCG V+ AR LF++ K VV+WN+MI+GYA +G +AL +
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Query: 230 FEKMK-DEVQPDHITFVGVLSACS 252
F M+ + V+ +F V+ C+
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCA 306
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/576 (39%), Positives = 334/576 (57%), Gaps = 69/576 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G +P+L KL Y+A L + +F+ + N+F ++ +I ++ + ++ A Y
Sbjct: 74 GLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYY 133
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++L G+ P+ FTF LK+CS +E G+ +H I+ +D++V L+D+YA+
Sbjct: 134 SQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKLGLGSDLYVRTGLVDVYARG 189
Query: 122 SCVVNARQV-------------------------------FDKILERD------------ 138
VV ARQ+ F+ + ERD
Sbjct: 190 GDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYA 249
Query: 139 ---------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
P+E T++ V+SA + AL GR +H + ++NV
Sbjct: 250 QSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVH 309
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEV 237
V TAL+DMY+KCG ++ AR +F+++R+K VV+WN+MI GYAMHG S AL LFE+M +
Sbjct: 310 VGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETG 369
Query: 238 -QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+P ITF+G+LSAC GGL +EGR FF M Y I+P ++HY CMV+LLG +G L+EA
Sbjct: 370 HKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEA 429
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARA 356
L+ M + DP +WG LL C+LH ++KL E + L++ + ++G YV+LSN+YA
Sbjct: 430 YGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAAT 489
Query: 357 ANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRM 416
NWEGVAK+R LM + GI+K CS IEV NK H F++G+ HP EIY L + +
Sbjct: 490 GNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSWL 549
Query: 417 KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCH 476
K GY P T+ V HD+ ++K + HSE+LAIAFGLI+T GT + I KNL++C DCH
Sbjct: 550 KARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNLRVCSDCH 609
Query: 477 IAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+K IS+IT R+I +RD NR+HHF+DG+CSCGDYW
Sbjct: 610 TVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/538 (40%), Positives = 316/538 (58%), Gaps = 38/538 (7%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
++ +Y L ++FD + R+L WN +I + G A+E++ + + G+ PD
Sbjct: 211 MIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPD 270
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWET-DVFVGAALIDMYAKCSCVVNARQVF 131
T A + I GR +H ++R W+ D+ G A++DMYAK S + A+++F
Sbjct: 271 VLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMF 330
Query: 132 DKILERD----------------------------------PSEATLVTVISASADIAAL 157
D + RD P + T V+V+ A + + AL
Sbjct: 331 DSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGAL 390
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
QG +H S + L+V V T ++D+YAKCG + A LFEQ + WNA+I+G
Sbjct: 391 QQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGV 450
Query: 218 AMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
+HGH KAL LF +M+ E + PDH+TFV +L+ACS GL D+GR FF M Y I P
Sbjct: 451 GVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPI 510
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
+HY CMVD+ G +G+LD+A D I M +KPD +WGALL +C++HG+V++ ++A + L
Sbjct: 511 AKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLF 570
Query: 337 ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGD 396
EL+P + G YV++SN+YA+ W+GV ++R L+ + ++K+ S IEVK + F SG+
Sbjct: 571 ELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGN 630
Query: 397 AS--HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
HP +EI +L L +++ GYVP V DVE DEK ++ HSERLAIAFG+
Sbjct: 631 QMNIHPQHEEIQRELLDLLAKIRSLGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGI 690
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
INTP T L I KNL++C DCH A K+ISKITEREI VRD NR+HHFKDG CSCGD+W
Sbjct: 691 INTPPRTPLHIYKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGYCSCGDFW 748
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 167/349 (47%), Gaps = 40/349 (11%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
LVH Y + +A++ FD + R++ WN ++ N A+ L+ R++ G+ D
Sbjct: 110 LVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGD 169
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
T L C L +H +++ + ++FV A+ID+Y K + R+VFD
Sbjct: 170 AVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFD 229
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
+ RD P TL+++ SA A +
Sbjct: 230 GMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICG 289
Query: 160 GRELHGFSWRHRFEL-NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
GR +H + R +++ ++ A+VDMYAK ++ A+ +F+ + + VSWN +ITGY
Sbjct: 290 GRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYM 349
Query: 219 MHGHSTKALDLFEKMK--DEVQPDHITFVGVLSACSRGGLFDEG-RMFFESMVRDYHIDP 275
+G +++A+ +++ M+ + ++P TFV VL A S G +G RM S+ ++D
Sbjct: 350 QNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDV 409
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
V TC++DL G+LDEA L+ + + G W A+++ +HGH
Sbjct: 410 YVG--TCVIDLYAKCGKLDEAM-LLFEQTPRRSTGPWNAVISGVGVHGH 455
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 144/325 (44%), Gaps = 32/325 (9%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE- 66
+ +V +Y+ + A ++FD +P R+ WN LI Y NG AI +Y + +
Sbjct: 308 IAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKH 367
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
GL P TF L A S L A+++G R+H I+ DV+VG +ID+YAKC +
Sbjct: 368 EGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDE 427
Query: 127 ARQVFDKILERD--PSEATL--VTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
A +F++ R P A + V V A +L + G S H
Sbjct: 428 AMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDH---------VTF 478
Query: 183 VDMYAKC---GLVKVARNLFEQLREKRVVS-----WNAMITGYAMHGHSTKALDLFEKMK 234
V + A C GLV RN F ++ + + M+ + G A D M
Sbjct: 479 VSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMP 538
Query: 235 DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP-SVQHYTCMVDLLGHSGR- 292
++PD + +L AC G + G++ +++ + +DP +V +Y M ++ G+
Sbjct: 539 --IKPDSAIWGALLGACRIHGNVEMGKVASQNL---FELDPKNVGYYVLMSNMYAKVGKW 593
Query: 293 --LDEACDLIMQMRVKPDPGVWGAL 315
+DE L+ + ++ PG W ++
Sbjct: 594 DGVDEVRSLVRRQNLQKTPG-WSSI 617
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 100/220 (45%), Gaps = 14/220 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + T ++ LY+ C L A LF++ P+R+ WN +I +G A+ L+
Sbjct: 404 GLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLF 463
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMYA 119
++ + G+ PD+ TF L ACS +++GR ++++ + A ++DM+
Sbjct: 464 SQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFF-NMMQTAYGIKPIAKHYACMVDMFG 522
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL---NV 176
+ + +A F + + P A ++ A + G+ + ++ FEL NV
Sbjct: 523 RAGQLDDAFD-FIRNMPIKPDSAIWGALLGACRIHGNVEMGK----VASQNLFELDPKNV 577
Query: 177 KVKTALVDMYAKCGL---VKVARNLFEQLREKRVVSWNAM 213
+ +MYAK G V R+L + ++ W+++
Sbjct: 578 GYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSI 617
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 5/150 (3%)
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQP 239
ALV Y + G V+ A F+++R + V +WNAM++G + + +A+ LF +M E V
Sbjct: 109 ALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAG 168
Query: 240 DHITFVGVLSACSRGGLFDEGRMFFESMVRDYH-IDPSVQHYTCMVDLLGHSGRLDEACD 298
D +T VL C L D + H +D + M+D+ G G L+E
Sbjct: 169 DAVTVSSVLPMCVL--LGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRK 226
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ M + D W ++++ + G V A
Sbjct: 227 VFDGMSSR-DLVTWNSIISGHEQGGQVASA 255
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/525 (42%), Positives = 323/525 (61%), Gaps = 35/525 (6%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
+ +AH LFD+IPQ ++ L+N + R YA A L+ ++L GL PD++TFP LKA
Sbjct: 71 MQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKA 130
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER----- 137
C++ A+EEGR++H I+ +V+V LI+MY C+ + AR+VFDKI E
Sbjct: 131 CASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTY 190
Query: 138 ----------------------------DPSEATLVTVISASADIAALPQGRELHGFSWR 169
P++ T+++V+S+ A + AL G+ +H + +
Sbjct: 191 NAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKK 250
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
+ F VKV TAL+DMYAKCG + A +FE + + +W+AMI YA+HGH KA+ L
Sbjct: 251 NGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSL 310
Query: 230 FEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
F++M K +PD ITF+G+L ACS GL +EG +F M Y + P ++HY CMVDLLG
Sbjct: 311 FKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLG 370
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
+GRL+EA + I+ + ++P P +W LL++C HG+V+L + +E++ EL+ G+Y+I
Sbjct: 371 RAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYII 430
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAK 408
LSN+ ARA WE V +RKLM +RG+ K CS +EV N H F SGD H +++
Sbjct: 431 LSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQA 490
Query: 409 LKWLEGRMKEAGYVPGTESVFH-DVENDEKANMICCHSERLAIAFGLINTPDGTRLLITK 467
L L +K GYVP T VFH D+E++EK + HSE+LAI FGL+NTP GT + + K
Sbjct: 491 LDELVKELKLVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVK 550
Query: 468 NLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
NL++C DCH A K IS I +R+I +RDV R+HHFKDG CSC DYW
Sbjct: 551 NLRVCGDCHSAAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/538 (40%), Positives = 316/538 (58%), Gaps = 34/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+++Y C L +A +F + R++ W +I A G AIEL++++ G
Sbjct: 569 LGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEG 628
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P TF LK C++ + ++EG+++ ++ + +E D VG ALI Y+K + +AR
Sbjct: 629 FRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAR 688
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+VFDK+ RD P++ + V++++A + +
Sbjct: 689 EVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFS 748
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL +G+ +H + + + +V+V AL+ MYAKCG A+ +F+ + EK VV+WNAMI
Sbjct: 749 ALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMIN 808
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
YA HG ++KAL F M+ E ++PD TF +LSAC+ GL EG F SM +Y +
Sbjct: 809 AYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVL 868
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P+++HY C+V LLG + R EA LI QM PD VW LL +C++HG++ LAE A
Sbjct: 869 PTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANN 928
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
++L + Y++LSN+YA A W+ VAK+R++M RGI+K SWIEV N H F++
Sbjct: 929 ALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIA 988
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
D SHP EIYA+LK L M+EAGY P T+ V HD+ + +C HSERLAIA+GL
Sbjct: 989 ADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGL 1048
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I TP GT + I KNL+IC DCH A KFISK+ REI RD NR+H FK+G CSC DYW
Sbjct: 1049 IKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 1106
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 165/342 (48%), Gaps = 36/342 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L+ L+++Y C + +AHQ+F +P+R++ WN LI YA G + A +L+ + G
Sbjct: 64 LSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAG 123
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+P+ T+ L AC + + +E G++IH +I+ ++ D V +L+ MY KC + AR
Sbjct: 124 FIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRAR 183
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
QVF I RD P + T + ++ A +
Sbjct: 184 QVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPS 243
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L +G+ +H + +++V TALV M +CG V A+ F+ ++ VV +NA+I
Sbjct: 244 MLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIA 303
Query: 216 GYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
A HGH+ +A + + +M+ D V + T++ +L+ACS + G++ + D H
Sbjct: 304 ALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGH-S 362
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
VQ ++ + G L +A +L M K D W A++
Sbjct: 363 SDVQIGNALISMYARCGDLPKARELFYTM-PKRDLISWNAII 403
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 166/351 (47%), Gaps = 40/351 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
LA L+++Y C L A +F+ R++ WN +I +A +G YE A +L+ +
Sbjct: 468 LANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEE 527
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L PDN TF L C A+E G++IH + + + DV +G ALI+MY +C + +AR
Sbjct: 528 LEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDAR 587
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
VF + RD P ++T +++ A
Sbjct: 588 NVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSA 647
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L +G+++ + +EL+ V AL+ Y+K G + AR +F+++ + +VSWN +I
Sbjct: 648 CLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIA 707
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEG-RMFFESMVRDYHI 273
GYA +G A++ +M+++ V P+ +FV +L+ACS +EG R+ E + R
Sbjct: 708 GYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQG 767
Query: 274 DPSV-QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
D V M G G E D I++ V W A++N+ HG
Sbjct: 768 DVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVV----TWNAMINAYAQHG 814
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 168/349 (48%), Gaps = 36/349 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T LV + C + +A Q F R++ ++N LI A A +G A E YYR+ G
Sbjct: 266 VGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDG 325
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ + T+ L ACS A+E G+ IH + + +DV +G ALI MYA+C + AR
Sbjct: 326 VALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKAR 385
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
++F + +RD P T + ++SA A+ +
Sbjct: 386 ELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSS 445
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
A G+ +H R + N + AL++MY +CG + A+N+FE + + V+SWN+MI
Sbjct: 446 AYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIA 505
Query: 216 GYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+A HG A LF++M+ +E++PD+ITF VLS C + G+ + + +
Sbjct: 506 GHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQ-IHGRITESGLQ 564
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
V ++++ G L +A ++ ++ + D W A++ C G
Sbjct: 565 LDVNLGNALINMYIRCGSLQDARNVFHSLQHR-DVMSWTAMIGGCADQG 612
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 183/385 (47%), Gaps = 38/385 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ P + L+ +Y C L A Q+F I R++ +N ++ YA + + L+
Sbjct: 158 GYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLF 217
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ G+ PD T+ L A + S ++EG+RIH+ + +D+ VG AL+ M +C
Sbjct: 218 GQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRC 277
Query: 122 SCVVNARQVFDKILERDP---------------------------------SEATLVTVI 148
V +A+Q F +RD + T ++++
Sbjct: 278 GDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSIL 337
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A + AL G+ +H +V++ AL+ MYA+CG + AR LF + ++ ++
Sbjct: 338 NACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLI 397
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNA+I GYA +A+ L+++M+ E V+P +TF+ +LSAC+ + +G+M E +
Sbjct: 398 SWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDI 457
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+R I + ++++ G L EA ++ + + D W +++ HG +
Sbjct: 458 LRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYET 515
Query: 328 AELALEKLI--ELEPHDAGNYVILS 350
A +++ ELEP + +LS
Sbjct: 516 AYKLFQEMQNEELEPDNITFASVLS 540
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 134/284 (47%), Gaps = 36/284 (12%)
Query: 75 TFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI 134
T+ L+ C+ + E +RIH ++ D+F+ LI+MY KC V++A QVF ++
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88
Query: 135 LERD---------------------------------PSEATLVTVISASADIAALPQGR 161
RD P++ T +++++A A L G+
Sbjct: 89 PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148
Query: 162 ELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHG 221
++H + ++ + +V+ +L+ MY KCG + AR +F + + VVS+N M+ YA
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208
Query: 222 HSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHY 280
+ + L LF +M E + PD +T++ +L A + + DEG+ + V + ++ ++
Sbjct: 209 YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE-GLNSDIRVG 267
Query: 281 TCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
T +V + G +D A + D V+ AL+ + HGH
Sbjct: 268 TALVTMCVRCGDVDSA-KQAFKGTADRDVVVYNALIAALAQHGH 310
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/562 (38%), Positives = 330/562 (58%), Gaps = 58/562 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI- 67
+ + LV +Y C + + ++FD I R + LWN +I YA NG E A+ L+ ++++
Sbjct: 335 VGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVA 394
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
GL+P+ T + AC A IH ++ ++ D +V AL+DMY++ + +
Sbjct: 395 GLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDIS 454
Query: 128 RQVFDKILERD------------------------------------------------- 138
+FD + RD
Sbjct: 455 ETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPY 514
Query: 139 -PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
P+ TL+TV+ A +AA+ +G+E+H ++ R+ ++ V +ALVDMYAKCG + ++R
Sbjct: 515 KPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRR 574
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM------KDEVQPDHITFVGVLSAC 251
+F ++ K V++WN +I MHG +AL+LF+ M E +P+ +TF+ V +AC
Sbjct: 575 VFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAAC 634
Query: 252 SRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP-G 310
S GL EG F M D+ ++P+ HY C+VDLLG +G+L+EA +L+ M + D G
Sbjct: 635 SHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVG 694
Query: 311 VWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMI 370
W +LL +C++H +V+L E+A + L+ LEP+ A +YV+LSNIY+ A W ++RK M
Sbjct: 695 AWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMR 754
Query: 371 DRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFH 430
G+KK CSWIE +++ H F++GD SHP ++++ L+ L +M++ GYVP T V H
Sbjct: 755 QMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLH 814
Query: 431 DVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREI 490
+V+ DEK N++C HSE+LAIAFG++NTP GT + + KNL++C+DCH A KFISKI EREI
Sbjct: 815 NVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREI 874
Query: 491 TVRDVNRYHHFKDGICSCGDYW 512
VRDV R+HHFK+G CSCGDYW
Sbjct: 875 IVRDVRRFHHFKEGTCSCGDYW 896
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 158/348 (45%), Gaps = 53/348 (15%)
Query: 34 PQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
P R+ W +R+ + + AI Y + G PDNF FP LKA S L ++ G
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 94 RIHEDVIRNKW-ETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP------------- 139
+IH ++ + + V V L++MY KC + + +VFD+I +RD
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172
Query: 140 --------------------SEATLVTVISASADIA---ALPQGRELHGFSWRHRFELNV 176
S TLV+V A +++ L G++LHG+S R +
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLR-VGDQKT 231
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE 236
AL+ MYAK G V ++ LFE ++ +VSWN MI+ ++ ++AL F M E
Sbjct: 232 FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 291
Query: 237 -VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGH-----S 290
V+ D +T VL ACS D G+ ++R+ + + + +VD+ + S
Sbjct: 292 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVES 351
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
GR D I+ R++ +W A+++ +G L E AL IE+
Sbjct: 352 GR--RVFDHILGRRIE----LWNAMISGYARNG---LDEKALILFIEM 390
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 170/379 (44%), Gaps = 45/379 (11%)
Query: 2 GFGFHPV-LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
G+G V +A LV++Y C + + ++FDRI R+ WN I A +E A+E
Sbjct: 122 GYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEA 181
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALS---AIEEGRRIHEDVIRNKWETDVFVGAALIDM 117
+ + + +FT ACS L + G+++H +R + F AL+ M
Sbjct: 182 FRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLR-VGDQKTFTNNALMAM 240
Query: 118 YAKCSCVVNARQVFDKILERDP----------------SEA-----------------TL 144
YAK V +++ +F+ ++RD SEA T+
Sbjct: 241 YAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTI 300
Query: 145 VTVISASADIAALPQGRELHGFSWRHRFEL-NVKVKTALVDMYAKCGLVKVARNLFEQLR 203
+V+ A + + L G+E+H + R+ + N V +ALVDMY C V+ R +F+ +
Sbjct: 301 ASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHIL 360
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKD--EVQPDHITFVGVLSACSRGGLFDEGR 261
+R+ WNAMI+GYA +G KAL LF +M + P+ T V+ AC F
Sbjct: 361 GRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKE 420
Query: 262 MFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
V+ + D VQ+ ++D+ G++D + + M V+ D W ++
Sbjct: 421 SIHGYAVKLGFKEDRYVQN--ALMDMYSRMGKMDISETIFDSMEVR-DRVSWNTMITGYV 477
Query: 321 LHGHVKLAELALEKLIELE 339
L G A + L ++ +E
Sbjct: 478 LSGRYSNALVLLHEMQRME 496
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/517 (42%), Positives = 326/517 (63%), Gaps = 9/517 (1%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + L+ +Y C CL A ++ D +P R++ WN L+ A NG ++ A+E+
Sbjct: 1155 VGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEV 1214
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR--NKWETDVFVGAALIDMY 118
+ +GL PD T L A + + ++ + E ++ NK + +I +Y
Sbjct: 1215 CKEMELLGLKPDAGTMASLLPAVTN-TCLDNVSFVKEMFMKLANK---SLVSWNVMIAVY 1270
Query: 119 AKCSCVVNARQVFDKILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
S A +F ++ + DP ++ +V+ A D++AL GR +H + R R + N+
Sbjct: 1271 MNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNL 1330
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD- 235
++ AL+DMYAKCG ++ AR +F+Q++ + VVSW +MI+ Y M+G A+ LF +M+D
Sbjct: 1331 LLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDL 1390
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
+ PD I FV VLSACS GL DEGR +F+ M + I P ++H+ CMVDLLG +G++DE
Sbjct: 1391 GLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDE 1450
Query: 296 ACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYAR 355
A I QM ++P+ VWGALL++C+++ ++ + LA ++L +L P +G YV+LSNIYA+
Sbjct: 1451 AYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAK 1510
Query: 356 AANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGR 415
A WE V +R +M +GIKK S E+ N+ H FL+GD SHP +IY +L L G+
Sbjct: 1511 AGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGK 1570
Query: 416 MKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDC 475
MKEAGYVP T+S HDVE ++K + HSE+LAIAF ++NT G+ + ITKNL++C DC
Sbjct: 1571 MKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDC 1630
Query: 476 HIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
HIA K ISKI REIT+RD NR+HHF +G+CSCGDYW
Sbjct: 1631 HIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 1667
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 171/340 (50%), Gaps = 15/340 (4%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
+P L KL+ Y+ C + +FD IP++N+ +NV+IR+Y N Y A+ ++ +
Sbjct: 1059 NPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMA 1118
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G+ PD++T+P LKA S + G +IH V+R + +VFVG LI MY KC C+V
Sbjct: 1119 GHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLV 1178
Query: 126 NARQVFDKILERD-PSEATLVTVISASA---DIAALPQGRELHGFSWRHRFELNVKVKTA 181
A +V D++ RD S +LV + + D + + EL G + + +
Sbjct: 1179 EACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLG------LKPDAGTMAS 1232
Query: 182 LVDMYAKCGL--VKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQ 238
L+ L V + +F +L K +VSWN MI Y + +A+D+F +M+D V
Sbjct: 1233 LLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVD 1292
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
PD I+ VL AC GR E +VR + P++ ++D+ G L+ A +
Sbjct: 1293 PDAISIASVLPACGDLSALLLGRRIHEYVVRK-RLQPNLLLENALIDMYAKCGCLEYARE 1351
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
+ QM+ + D W +++++ ++G + A ++ +L
Sbjct: 1352 VFDQMKFR-DVVSWTSMISAYGMNGKGRDAVSLFSRMQDL 1390
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 6/183 (3%)
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
H N + L+ YA CG R++F+++ +K VV +N MI Y + + AL +
Sbjct: 1054 HDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLV 1113
Query: 230 FEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
F+ M + PDH T+ VL A S G ++VR +D +V ++ + G
Sbjct: 1114 FKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVR-VGLDLNVFVGNGLISMYG 1172
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA-ELALE-KLIELEPHDAGNY 346
G L EAC ++ ZM + D W +L+ C +G A E+ E +L+ L+P DAG
Sbjct: 1173 KCGCLVEACRVLDZMPCR-DVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKP-DAGTM 1230
Query: 347 VIL 349
L
Sbjct: 1231 ASL 1233
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/555 (41%), Positives = 332/555 (59%), Gaps = 67/555 (12%)
Query: 25 NAHQLFDR-IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKAC 83
N LF++ + + N+F WN +I A +G A+ + + ++ L P+ TFP A+K+C
Sbjct: 27 NLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSC 86
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR--------------- 128
SAL + GR+ H+ + +E D+FV +AL+DMY+KC + +AR
Sbjct: 87 SALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWT 146
Query: 129 ----------------QVFDKILERDP--------------------------------- 139
+VFD + ERD
Sbjct: 147 SMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEIN 206
Query: 140 -SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
+ TL V+ A A + G+ +H + E NV V T+++DMY KCG V++AR
Sbjct: 207 YNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKA 266
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLF 257
F+++REK V SW+AM+ GY MHGH+ +AL++F +M V+P++ITFV VL+ACS GL
Sbjct: 267 FDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLL 326
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
+EG +F++M ++ ++P V+HY CMVDLLG +G L EA DLI M+++PD VWGALL
Sbjct: 327 EEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLG 386
Query: 318 SCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKS 377
+C++H +V L E++ KL EL+P + G YV+LSNIYA A WE V ++R LM + G+ K
Sbjct: 387 ACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKP 446
Query: 378 IACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEK 437
S +++K + H FL GD HP ++IY L+ L +++E GYVP SV HDV ++EK
Sbjct: 447 PGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEK 506
Query: 438 ANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNR 497
++ HSE+LA+AFG++NT GT + I KNL++C DCH AIKFISKI +REI VRD R
Sbjct: 507 EMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKR 566
Query: 498 YHHFKDGICSCGDYW 512
+HHF+DG+CSCGDYW
Sbjct: 567 FHHFRDGLCSCGDYW 581
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 167/362 (46%), Gaps = 72/362 (19%)
Query: 3 FGFHPVL--ATKLVHLYSACDCLHNAHQLFDRIPQRNL---------------------- 38
FGF P L ++ LV +YS C L +A LFD I RN+
Sbjct: 105 FGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRV 164
Query: 39 ---------FLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDN-FTFPFALKACSALSA 88
WN +I YA NG ++E+++R+++ G + N T L AC+ +
Sbjct: 165 FDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGS 224
Query: 89 IEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVI 148
G+ IH+ VI+ E++VFVG ++IDMY KC V AR+ FD++ E++ V
Sbjct: 225 QRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKN--------VK 276
Query: 149 SASADIAALPQGRELHGFSWRHR---FELNVK-VK---TALVDMYAKC---GLVKVARNL 198
S SA +A G +HG + +E+N+ VK V + A C GL++ +
Sbjct: 277 SWSAMVA----GYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHW 332
Query: 199 FEQLR-----EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSR 253
F+ + E V + M+ G+ +A DL + MK ++PD + + +L AC
Sbjct: 333 FKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMK--LRPDFVVWGALLGACRM 390
Query: 254 GGLFDEGRMFFESMVRDYHIDP-SVQHYTCMVDLLGHSGRLDEACDLIMQMR----VKPD 308
D G + S + + +DP + +Y + ++ +GR ++ + + M+ VKP
Sbjct: 391 HKNVDLGEI---SARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKP- 446
Query: 309 PG 310
PG
Sbjct: 447 PG 448
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG + + T ++ +Y C + A + FDR+ ++N+ W+ ++ Y +G + A+E+
Sbjct: 238 MGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEV 297
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+Y + G+ P+ TF L ACS +EEG
Sbjct: 298 FYEMNMAGVKPNYITFVSVLAACSHAGLLEEG 329
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/552 (43%), Positives = 316/552 (57%), Gaps = 46/552 (8%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF H + T L LYS C + A LF +I Q +L +N +I Y N E ++ L
Sbjct: 236 VGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRL 295
Query: 61 YYRLLE----------IGLVPDNFTFPFA---LKAC------------------------ 83
+ LL +GL+P FPF L C
Sbjct: 296 FKELLVSGEKVNSSSIVGLIP--VFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVY 353
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI--LERDPSE 141
S L+ IE R + ++ E + A+I YA+ A +F ++ E P+
Sbjct: 354 SRLNEIESARLLFDE----SSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNP 409
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
T+ +++SA A + AL G+ +H R FE N+ V TAL+DMYAKCG + A+ LF
Sbjct: 410 VTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSM 469
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEG 260
+ EK V+WNAMI+GY +HG+ +AL+LF +M V P +TF+ VL ACS GL EG
Sbjct: 470 MPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREG 529
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
F SMV D+ +P +HY CMVDLLG +G LD+A D I +M V+P P VWGALL +C
Sbjct: 530 DEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACM 589
Query: 321 LHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIAC 380
+H LA LA +KL EL+P + G YV+LSNIY+ N+ A +R ++ R + K+ C
Sbjct: 590 IHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGC 649
Query: 381 SWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANM 440
+ IEV N H F SGD SHP IYA L+ L G+M+EAG+ T + HDVE +EK M
Sbjct: 650 TLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELM 709
Query: 441 ICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHH 500
+ HSE+LAIAFGLI + GT + I KNL++C DCH A KFISKITER I VRD NR+HH
Sbjct: 710 VKVHSEKLAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHH 769
Query: 501 FKDGICSCGDYW 512
FKDGICSCGDYW
Sbjct: 770 FKDGICSCGDYW 781
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 191/442 (43%), Gaps = 88/442 (19%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE- 66
V TKL H S + A LF IP +LFL+NVLIRA++ N A+ LY L +
Sbjct: 43 VTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKS 102
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
L PDNFT+ F + S+L I + +D+FVG+A++ Y K S V
Sbjct: 103 TPLEPDNFTYAFVISGASSLGLGLLLHAHS---IVAGFGSDLFVGSAIVACYFKFSRVAA 159
Query: 127 ARQVFDKILERDP---------------------------------SEATLVTVISASAD 153
AR+VFD +LERD T+ V+ A+
Sbjct: 160 ARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAE 219
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+ L G + + + F + V T L +Y+KCG ++ AR LF Q+ + +VS+NAM
Sbjct: 220 LQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAM 279
Query: 214 ITGYAMHGHSTKALDLFEKM---KDEVQPDHITFVGV-----------LSAC-------- 251
I+GY + + ++ LF+++ ++V I VG+ L+ C
Sbjct: 280 ISGYTCNNETESSVRLFKELLVSGEKVNSSSI--VGLIPVFFPFGHLHLTRCIHGFCTKS 337
Query: 252 ----------------SRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
SR + R+ F D + S+ + M+ +G ++
Sbjct: 338 GVVSNSSVSTALTTVYSRLNEIESARLLF-----DESSEKSLASWNAMISGYAQNGLTEK 392
Query: 296 ACDLIMQMR---VKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYV--ILS 350
A L +M+ V+P+P ++L++C G + L + + LI E ++ +V L
Sbjct: 393 AISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKW-VHDLINRESFESNIFVSTALI 451
Query: 351 NIYARAANWEGVAKLRKLMIDR 372
++YA+ + +L +M ++
Sbjct: 452 DMYAKCGSITEAQRLFSMMPEK 473
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 167/357 (46%), Gaps = 36/357 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + + +V Y + A ++FD + +R+ LWN ++ N ++ AI ++
Sbjct: 136 GFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIF 195
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+++ G+ D+ T L + L + G I ++ + + +V L +Y+KC
Sbjct: 196 GDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKC 255
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ AR +F +I + D + +++V +I
Sbjct: 256 GEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLI 315
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
L R +HGF + N V TAL +Y++ ++ AR LF++ EK +
Sbjct: 316 PVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLA 375
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNAMI+GYA +G + KA+ LF++M+ EV+P+ +T +LSAC++ G G+ + +
Sbjct: 376 SWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLI 435
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
R+ + ++ T ++D+ G + EA L M K + W A+++ LHG+
Sbjct: 436 NRE-SFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEK-NAVTWNAMISGYGLHGY 490
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/566 (40%), Positives = 326/566 (57%), Gaps = 69/566 (12%)
Query: 12 KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
KL Y++ L + LF R ++F W +I +A G +E A+ Y ++L G+ P
Sbjct: 14 KLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEP 73
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV- 130
+ FTF LK C IE G+ +H ++ +++D++V L+D+YA+ VV+A+Q+
Sbjct: 74 NAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLF 129
Query: 131 ------------------------------FDKILERD---------------------- 138
FD + ERD
Sbjct: 130 DTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALV 189
Query: 139 -----------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYA 187
P+E T+++V+SA + AL GR +H + + + NV V TALVDMY+
Sbjct: 190 LFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYS 249
Query: 188 KCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVG 246
KCG ++ AR +F+++ +K VV+WN+MI GYAM G S +AL LF+ M + + P +ITF+G
Sbjct: 250 KCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIG 309
Query: 247 VLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK 306
+LSAC G EG F M +Y I+P ++HY CMV+LLG +G +++A +L+ M ++
Sbjct: 310 ILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIE 369
Query: 307 PDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLR 366
PDP +WG LL +C+LHG + L E +E L++ ++G Y++LSNIYA NW+GVA+LR
Sbjct: 370 PDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLR 429
Query: 367 KLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTE 426
+M D G+KK CS IEV NK H FL+G +HP EIY L+ + G +K GY P T+
Sbjct: 430 TMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTD 489
Query: 427 SVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKIT 486
V HD+ EK + HSE+LAIAFGLINT GT + I KNL++C DCH K ISKIT
Sbjct: 490 IVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKIT 549
Query: 487 EREITVRDVNRYHHFKDGICSCGDYW 512
R+I VRD NR+HHF +G CSCGDYW
Sbjct: 550 GRKIVVRDRNRFHHFVNGSCSCGDYW 575
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G F+ + T LV +YS C L +A +FD+I +++ WN +I YA G + A++L+
Sbjct: 233 GIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLF 292
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ +GL P N TF L AC + EG
Sbjct: 293 KSMCRMGLHPTNITFIGILSACGHSGWVTEG 323
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/548 (39%), Positives = 334/548 (60%), Gaps = 37/548 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFD--RIPQRNLFLWNVLIRAYAWNGPYEVAI 58
+GF + L+ LY+ C L +A +F+ +P+R + W ++ AYA NG A+
Sbjct: 148 LGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEAL 207
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
E++ ++ ++ + PD L A + L +++GR IH V++ E + + +L MY
Sbjct: 208 EIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMY 267
Query: 119 AKCSCVVNARQVFDKI-------------------------------LERD--PSEATLV 145
AKC V A+ +FDK+ + +D P ++
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+ ISA A + +L Q R ++ + R + +V + +AL+DM+AKCG V+ AR +F++ ++
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
VV W+AMI GY +HG + +A+ L+ M + V P+ +TF+G+L AC+ G+ EG FF
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
M D+ I+P QHY C++DLLG +G LD+A ++I M V+P VWGALL++CK H H
Sbjct: 448 NRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRH 506
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
V+L E A ++L ++P + G+YV LSN+YA A W+ VA++R M ++G+ K + CSW+E
Sbjct: 507 VELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVE 566
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
V+ + AF GD SHP +EI +++W+E R+KE G+V ++ HD+ ++E +C H
Sbjct: 567 VRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSH 626
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SER+AIA+GLI+TP GT L ITKNL+ C +CH A K ISK+ +REI VRD NR+HHFKDG
Sbjct: 627 SERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDG 686
Query: 505 ICSCGDYW 512
+CSCGDYW
Sbjct: 687 VCSCGDYW 694
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 199/382 (52%), Gaps = 44/382 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G F L TKL+H S+ + A Q+FD +P+ +F WN +IR Y+ N ++ A+ +
Sbjct: 47 LGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLM 106
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
Y + + PD+FTFP LKACS LS ++ GR +H V R ++ DVFV LI +YAK
Sbjct: 107 YSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAK 166
Query: 121 CSCVVNARQVFDKI-----------------------------------LERDPSEATLV 145
C + +AR VF+ + ++ P LV
Sbjct: 167 CRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALV 226
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+V++A + L QGR +H + E+ + +L MYAKCG V A+ LF++++
Sbjct: 227 SVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSP 286
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
++ WNAMI+GYA +G++ +A+D+F +M +V+PD I+ +SAC++ G ++ R +
Sbjct: 287 NLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMY 346
Query: 265 ESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
E + R DY D + + ++D+ G + E L+ + D VW A++ LHG
Sbjct: 347 EYVGRSDYRDDVFIS--SALIDMFAKCGSV-EGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 324 HVKLAELALEKLIE---LEPHD 342
+ A ++L + +E + P+D
Sbjct: 404 RAREA-ISLYRAMERGGVHPND 424
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 142/276 (51%), Gaps = 13/276 (4%)
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
+++ RLL +GL F + A S+ I R++ +D+ R + +F A+I Y
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQ----IFPWNAIIRGY 94
Query: 119 AKCSCVVNARQVFD--KILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
++ + +A ++ ++ P T ++ A + ++ L GR +H +R F+ +V
Sbjct: 95 SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 177 KVKTALVDMYAKCGLVKVARNLFE--QLREKRVVSWNAMITGYAMHGHSTKALDLFEKM- 233
V+ L+ +YAKC + AR +FE L E+ +VSW A+++ YA +G +AL++F +M
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214
Query: 234 KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGR 292
K +V+PD + V VL+A + +GR S+V+ I+P + + + G+
Sbjct: 215 KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL--LISLNTMYAKCGQ 272
Query: 293 LDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ A L +M+ P+ +W A+++ +G+ + A
Sbjct: 273 VATAKILFDKMK-SPNLILWNAMISGYAKNGYAREA 307
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/551 (40%), Positives = 334/551 (60%), Gaps = 40/551 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P LATKL+++Y + +A ++FD ++ +F+WN + RA A E + LY
Sbjct: 104 GLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLY 163
Query: 62 YRLLEIGLVPDNFTFPFALKAC--SALS--AIEEGRRIHEDVIRNKWETDVFVGAALIDM 117
++ IG+ + FT+ + LKAC S LS + +G+ IH ++R+ +E V V L+D+
Sbjct: 164 GQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDV 223
Query: 118 YAKCSCVVNARQVFDKILERD-----------------------------------PSEA 142
YA+ V A VF + +++ P+
Sbjct: 224 YARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPI 283
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T+V+V+ A A +AAL G+ +H + R + + V L+ MY +CG + + +F+ +
Sbjct: 284 TMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYM 343
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR 261
+++ V+SWN++I+ Y MHG KA+ +FE M + V P +ITF+ VL ACS GL +E +
Sbjct: 344 KKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAK 403
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
+ FESM+ Y I P ++HY CMVD+LG + RLDEA +LI M KP P VWG+LL SC++
Sbjct: 404 ILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRI 463
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
H +V+LAE A L ELEP +AGNYV+LS+IYA++ W V ++RK + RG++K +CS
Sbjct: 464 HCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCS 523
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMI 441
WIEVK K ++ +S + +P +E+ A L L +K GYVP T V +D++ +EK ++
Sbjct: 524 WIEVKRKIYSLVSIEEYNPQIEELCAFLITLLTEIKNQGYVPQTNVVTYDLDEEEKERIV 583
Query: 442 CCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF 501
HS +LA+AFGLINT G + I+ NL++C+DCH +KF+SK T REI +RDVNR+H F
Sbjct: 584 LGHSGKLAVAFGLINTSKGEIIRISNNLRLCEDCHAFMKFVSKFTNREILLRDVNRFHCF 643
Query: 502 KDGICSCGDYW 512
KDG+CSCGDYW
Sbjct: 644 KDGVCSCGDYW 654
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 137/306 (44%), Gaps = 42/306 (13%)
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
P TF + +C +++ +G +H ++ + + D ++ LI+MY V +A +V
Sbjct: 72 PTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKV 131
Query: 131 FDKILERD--------------------------------PSEA-----TLVTVISASAD 153
FD+ E+ PS L + +
Sbjct: 132 FDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELS 191
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
I L +G+E+H RH +E +V V T L+D+YA+ G V A ++F + +K +VSW+AM
Sbjct: 192 ICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAM 251
Query: 214 ITGYAMHGHSTKALDLFEKMKDE---VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
I YA + KAL+LF+ M E P+ IT V VL AC+ + G++ ++R
Sbjct: 252 IACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRR 311
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
+D ++ ++ + G G + + M+ K D W +L++ +HG K A
Sbjct: 312 -GLDSTLPVLNTLITMYGRCGEISTGQRVFDYMK-KRDVISWNSLISIYGMHGLGKKAIQ 369
Query: 331 ALEKLI 336
E +I
Sbjct: 370 IFENMI 375
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/543 (41%), Positives = 321/543 (59%), Gaps = 34/543 (6%)
Query: 4 GFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
G + V+ ++ C + A LF+ I +R+ W ++ NG A++++ R
Sbjct: 208 GKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRR 267
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
+ G+ D +TF L AC AL+A+EEG++IH + R +E +VFVG+AL+DMY+KC
Sbjct: 268 MRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRS 327
Query: 124 VVNARQVFDKIL------------------------------ERD---PSEATLVTVISA 150
V A VF +++ +RD P + TL +VIS+
Sbjct: 328 VRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISS 387
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
A++A+L +G + H + V V ALV +Y KCG ++ A LF+++ VSW
Sbjct: 388 CANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 447
Query: 211 NAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
A++ GYA G + + +DLFEKM + V+PD +TF+GVLSACSR GL D+GR +F SM +
Sbjct: 448 TALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQ 507
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
D+ I P HYTCM+DL SG L +A + I QM PD W LL++C+L G +++ +
Sbjct: 508 DHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGK 567
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
A E L++L+P + +YV+L +++A W VAKLR+ M DR +KK CSWI+ KNK
Sbjct: 568 WAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKV 627
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLA 449
H F + D SHP IY KL+WL +M E GY P SV HDV + EK +M+ HSE+LA
Sbjct: 628 HIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPDVSSVLHDVADAEKVHMLSHHSEKLA 687
Query: 450 IAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
IAFGLI P + I KNL++C DCH A KFISKIT R+I VRD R+H F +GICSCG
Sbjct: 688 IAFGLIFVPPEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCG 747
Query: 510 DYW 512
D+W
Sbjct: 748 DFW 750
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 173/401 (43%), Gaps = 69/401 (17%)
Query: 4 GFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
G + V L+ + + + +LF +PQR+ +N L+ ++ G + A Y
Sbjct: 74 GRNLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVA 133
Query: 64 LL--EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK- 120
LL E G+ P T + SAL GR++H ++R + F G+ L+DMYAK
Sbjct: 134 LLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKV 193
Query: 121 ------------------------------CSCVVNARQVFDKILERDP-SEATLVTVIS 149
C V AR +F+ I ERD + T+VT ++
Sbjct: 194 GPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLT 253
Query: 150 --------------------------------ASADIAALPQGRELHGFSWRHRFELNVK 177
A +AAL +G+++H + R +E NV
Sbjct: 254 QNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVF 313
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDE 236
V +ALVDMY+KC V++A +F ++ K ++SW AMI GY +G +A+ +F +M +D
Sbjct: 314 VGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDG 373
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
++PD T V+S+C+ +EG F + + P V +V L G G +++A
Sbjct: 374 IKPDDFTLGSVISSCANLASLEEGAQ-FHCLALVSGLRPYVTVSNALVTLYGKCGSIEDA 432
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
L +M D W AL+ G K EK++
Sbjct: 433 HRLFDEMSFH-DQVSWTALVMGYAQFGKAKETIDLFEKMLS 472
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 144/386 (37%), Gaps = 111/386 (28%)
Query: 6 HP---VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
HP L L+ Y++ L +A ++FD +P RNL N L+ A A
Sbjct: 42 HPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALA------------- 88
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
GLV D E + + + D AL+ +++
Sbjct: 89 ---RAGLVRD-----------------------MERLFTSLPQRDAVSYNALLAGFSRAG 122
Query: 123 CVVNARQVFDKILERD----PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
A + +L + PS T+ V+ ++ + GR++H R F
Sbjct: 123 AHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFT 182
Query: 179 KTALVDMYAK-------------------------------CGLVKVARNLFEQLREKRV 207
+ LVDMYAK C +V AR LFE + E+
Sbjct: 183 GSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDS 242
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
++W M+TG +G ++ALD+F +M+ E V D TF +L+AC +EG+
Sbjct: 243 ITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAY 302
Query: 267 MVRDYHID------------------------------PSVQHYTCMVDLLGHSGRLDEA 296
+ R + D ++ +T M+ G +G +EA
Sbjct: 303 ITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEA 362
Query: 297 CDLIMQMR---VKPDPGVWGALLNSC 319
+ +M+ +KPD G++++SC
Sbjct: 363 VRVFSEMQRDGIKPDDFTLGSVISSC 388
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/540 (40%), Positives = 326/540 (60%), Gaps = 34/540 (6%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P + L+ +Y+ C + +AH +F+ IP ++ LW+ LI YA + E A E++ R++
Sbjct: 284 PHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMR 343
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
+VP+ F+ L+AC+ ++ +E G +IH I+ +E+++FVG AL+DMYAKC + N
Sbjct: 344 SFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMEN 403
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISASAD 153
+ ++F + + + ++ T +V+ A A+
Sbjct: 404 SLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACAN 463
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+++ ++H + F + V +L+D YAKCG ++ A +FE + E VVSWN++
Sbjct: 464 TSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSI 523
Query: 214 ITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I+ YA+HG +T AL+LF++M K +++ + +TFV +LS C GL ++G F SM+ D+
Sbjct: 524 ISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHR 583
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I PS++HYTC+V LLG +GRL +A I + P P VW ALL+SC +H +V L A
Sbjct: 584 IKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAA 643
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
EK++++EPHD YV+LSN+YA A + VA RK M + G+KK SW+E+K + HAF
Sbjct: 644 EKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAF 703
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
G A HP+ I A L+WL + GYVP V HDV+ +EKA M+ HSERLA+A+
Sbjct: 704 SVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAY 763
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
GL TP G + I KNL+ C DCH K ISKI +REI VRD+NR+HHF++GICSCGDYW
Sbjct: 764 GLSMTPPGHPIRIMKNLRSCLDCHTMFKVISKIVQREIIVRDINRFHHFEEGICSCGDYW 823
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 187/414 (45%), Gaps = 38/414 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + T L+ YS C + +A +FD I ++ W ++ Y+ N E A+
Sbjct: 177 LGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNT 236
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ G P+ F ALKA LS+ G+ IH ++ ++T+ VG AL+DMYAK
Sbjct: 237 FSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAK 296
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + +A +F+ I D P+E +L V
Sbjct: 297 CGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGV 356
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A A+IA L G ++H + + +E + V AL+DMYAKC ++ + +F L++
Sbjct: 357 LQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANE 416
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSWN +I GY G + AL +F +M+ + +TF VL AC+ + S
Sbjct: 417 VSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHA-VQIHS 475
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
++ + ++D G + +A + + V+ D W +++++ LHG
Sbjct: 476 LIEKSTFNNDTIVCNSLIDTYAKCGFIRDALK-VFESIVECDVVSWNSIISAYALHGRAT 534
Query: 327 LAELALEKL--IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
A +++ +++ +D +LS + +G+ +M+D IK S+
Sbjct: 535 NALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSM 588
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 134/285 (47%), Gaps = 34/285 (11%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
A L++ Y+ L A +LFD +P+RN + L++ YA G +E A+EL+ RL G
Sbjct: 85 ANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGH 144
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
++F LK + A IH + + + FVG ALID Y+ C V +AR
Sbjct: 145 EVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARC 204
Query: 130 VFDKILERD---------------------------------PSEATLVTVISASADIAA 156
VFD I+ +D P+ L + + A+ +++
Sbjct: 205 VFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSS 264
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
G+ +HG S + ++ V AL+DMYAKCG ++ A +FE + V+ W+ +I+
Sbjct: 265 ALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISR 324
Query: 217 YAMHGHSTKALDLFEK-MKDEVQPDHITFVGVLSACSRGGLFDEG 260
YA + +A ++F + M+ V P+ + GVL AC+ + G
Sbjct: 325 YAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELG 369
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 117/286 (40%), Gaps = 46/286 (16%)
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYAKCSCVVNARQ 129
D++ L+ C A GR +H V++ + D F L++ YAK + AR+
Sbjct: 44 DSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARR 103
Query: 130 VFDKILERDPSEATLVTVISASADIAALPQGREL-------------------------- 163
+FD + ER+ + VT++ A + EL
Sbjct: 104 LFDGMPERN--RVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTM 161
Query: 164 ---------HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
H + + + N V TAL+D Y+ CG V AR +F+ + K V+W AM+
Sbjct: 162 DAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMV 221
Query: 215 TGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSA--CSRGGLFDEGRMFFESMVRDY 271
+ Y+ + AL+ F KM+ +P+ L A C L +G + S+ Y
Sbjct: 222 SCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKG-IHGCSVKTLY 280
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
+P V ++D+ G +++A I +M D +W L++
Sbjct: 281 DTEPHVG--GALLDMYAKCGDIEDA-HAIFEMIPHDDVILWSFLIS 323
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 95/228 (41%), Gaps = 45/228 (19%)
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
+L+ L++ YAK G + AR LF+ + E+ VS+ ++ GYA+ G +AL+LF +
Sbjct: 79 QLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRR 138
Query: 233 MKDEV-QPDHITFVGVLS-----------------ACSRGGLFDEGRMFFESMVRDYHID 274
++ E + +H +L AC G D +++ Y +
Sbjct: 139 LQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLG--HDRNAFVGTALIDAYSLC 196
Query: 275 PSVQH---------------YTCMVDLLGHSGRLDEACDLIMQMRV---KPDPGVWGALL 316
+V H +T MV + + A + +MR+ KP+P V + L
Sbjct: 197 GAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSAL 256
Query: 317 NSCKLHGHVKLAE----LALEKLIELEPHDAGNYVILSNIYARAANWE 360
+ L + +++ L + EPH G L ++YA+ + E
Sbjct: 257 KAAVCLSSALLGKGIHGCSVKTLYDTEPHVGG---ALLDMYAKCGDIE 301
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/515 (41%), Positives = 322/515 (62%), Gaps = 5/515 (0%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + L+ +Y C CL A ++ D++P R++ WN L+ A NG ++ A+E+
Sbjct: 166 VGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEV 225
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ +GL PD T L A + + + +++ + +I +Y
Sbjct: 226 CKEMELLGLKPDAGTMASLLPAVT--NTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMN 283
Query: 121 CSCVVNARQVFDKILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
S A +F ++ + DP ++ +V+ A D++AL GR +H + R R + N+ +
Sbjct: 284 NSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLL 343
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EV 237
+ AL+DMYAKCG ++ AR +F+Q++ + VVSW +MI+ Y M+G A+ LF +M+D +
Sbjct: 344 ENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGL 403
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
PD I FV VLSACS GL DEGR +F+ M + I P ++H+ CMVDLLG +G++DEA
Sbjct: 404 NPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAY 463
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAA 357
I QM ++P+ VWGALL++C+++ ++ + LA ++L +L P +G YV+LSNIYA+A
Sbjct: 464 GFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAG 523
Query: 358 NWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK 417
WE V +R +M +GIKK S E+ N+ H FL+GD SHP +IY +L G+MK
Sbjct: 524 RWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMK 583
Query: 418 EAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHI 477
EAGYVP T+S HDVE ++K + HSE+LAIAF ++NT G+ + ITKNL++C DCHI
Sbjct: 584 EAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHI 643
Query: 478 AIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
A K ISKI REIT+RD NR+HHF +G+CSCGDYW
Sbjct: 644 AAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 678
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 163/321 (50%), Gaps = 7/321 (2%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
+P L KL+ Y+ C + +FD IP++N+ +NV+IR+Y N Y A+ ++ +
Sbjct: 70 NPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMA 129
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G+ PD++T+P LKA S + G +IH V+R + +VFVG LI MY KC C+V
Sbjct: 130 GHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLV 189
Query: 126 NARQVFDKILERD-PSEATLVTVISASADI-AALPQGRELHGFSWRHRFELNVKVKTALV 183
A +V D++ RD S +LV + + AL +E+ + + A+
Sbjct: 190 EACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVT 249
Query: 184 DMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHI 242
+ V + +F +L K +VSWN MI Y + +A+D+F +M+D V PD I
Sbjct: 250 NTCLDN--VSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAI 307
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
+ VL AC GR E +VR + P++ ++D+ G L+ A ++ Q
Sbjct: 308 SIASVLPACGDLSALLLGRRIHEYVVRK-RLQPNLLLENALIDMYAKCGCLEYAREVFDQ 366
Query: 303 MRVKPDPGVWGALLNSCKLHG 323
M+ + D W +++++ ++G
Sbjct: 367 MKFR-DVVSWTSMISAYGMNG 386
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 116/265 (43%), Gaps = 41/265 (15%)
Query: 93 RRIHEDV-IRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER-------------- 137
+++H + I + ++ +G L+ YA C + R +FD+I ++
Sbjct: 55 KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVN 114
Query: 138 -------------------DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
DP T V+ AS+ L G ++H R +LNV V
Sbjct: 115 NHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFV 174
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEV 237
L+ MY KCG + A + +Q+ + VVSWN+++ G A +G AL++ ++M+ +
Sbjct: 175 GNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGL 234
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
+PD T +L A + L + F + M + S+ + M+ + ++ EA
Sbjct: 235 KPDAGTMASLLPAVTNTCL--DNVSFVKEMFMKL-ANKSLVSWNVMIAVYMNNSMPAEAV 291
Query: 298 DLIMQMR---VKPDPGVWGALLNSC 319
D+ +QM V PD ++L +C
Sbjct: 292 DIFLQMEDHAVDPDAISIASVLPAC 316
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 6/183 (3%)
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
H N + L+ YA CG R++F+++ +K VV +N MI Y + + AL +
Sbjct: 65 HDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLV 124
Query: 230 FEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
F+ M + PDH T+ VL A S G ++VR +D +V ++ + G
Sbjct: 125 FKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVR-VGLDLNVFVGNGLISMYG 183
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA-ELALE-KLIELEPHDAGNY 346
G L EAC ++ QM + D W +L+ C +G A E+ E +L+ L+P DAG
Sbjct: 184 KCGCLVEACRVLDQMPCR-DVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKP-DAGTM 241
Query: 347 VIL 349
L
Sbjct: 242 ASL 244
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/538 (40%), Positives = 321/538 (59%), Gaps = 34/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++ LV +YS CD L +A F+ +P+++L WN +I Y+ A+ L+ + + G
Sbjct: 369 VSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEG 428
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ + T LK+ + L + R++H +++ + +D++V +LID Y KCS V +A
Sbjct: 429 IGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAE 488
Query: 129 QVFDKI---------------------------------LERDPSEATLVTVISASADIA 155
++F++ +E P ++++A A+++
Sbjct: 489 RIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLS 548
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
A QG++LH ++ F L++ +LV+MYAKCG + A F +L E+ +VSW+AMI
Sbjct: 549 AFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIG 608
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G A HGH +AL LF +M K+ V P+HIT V VL AC+ GL E +++FESM +
Sbjct: 609 GLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFK 668
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P +HY CM+DLLG +G+++EA +L+ +M + + VWGALL + ++H V+L A E
Sbjct: 669 PMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEM 728
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L LEP +G +V+L+NIYA A WE VA++R+LM D +KK SWIEVK+K + FL
Sbjct: 729 LFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLV 788
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD SH EIYAKL L M +AGYVP E HDVE EK ++ HSE+LA+AFGL
Sbjct: 789 GDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGL 848
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I TP G + + KNL++C DCH A K+I KI REI VRD+NR+HHFKDG CSCGDYW
Sbjct: 849 IATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 906
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 197/427 (46%), Gaps = 67/427 (15%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF +A LV +Y+ CD ++ +LFD IP+RN+ WN L Y A+ L+
Sbjct: 187 GFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLF 246
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
Y ++ G+ P+ F+ + AC+ L G+ IH +I+ ++ D F AL+DMYAK
Sbjct: 247 YEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKV 306
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISA-------SADIAALPQ-GRELHGFSWRHRFE 173
+ +A VF+KI + P + VI+ + L Q R+LH + E
Sbjct: 307 GDLADAISVFEKI--KQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDME 364
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
++ V LVDMY+KC L++ AR F L EK +++WNA+I+GY+ + +AL LF +M
Sbjct: 365 SDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEM 424
Query: 234 -KDEVQPDHITFVGVLSACSRGGL-----------------FDEGRMFFESMVRDY---- 271
K+ + + T +L S GL F S++ Y
Sbjct: 425 HKEGIGFNQTTLSTILK--STAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCS 482
Query: 272 HIDPS-----------VQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWGALLN 317
H++ + + +T M+ G+ +EA L ++M+ +KPD V +LLN
Sbjct: 483 HVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLN 542
Query: 318 SC----------KLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRK 367
+C +LH H+ L+ AGN ++ N+YA+ + + +
Sbjct: 543 ACANLSAFEQGKQLHVHILKYGFVLDIF-------AGNSLV--NMYAKCGSIDDAGRAFS 593
Query: 368 LMIDRGI 374
+ +RGI
Sbjct: 594 ELTERGI 600
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 155/305 (50%), Gaps = 42/305 (13%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P + L++LYS C A +L D + +L W+ LI YA NG A+ +
Sbjct: 86 GLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAF 145
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + +G+ + FTF LKACS + + G+++H V+ + +E DVFV L+ MYAKC
Sbjct: 146 HEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKC 205
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
++++++FD+I ER+ P+E +L +++
Sbjct: 206 DEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMV 265
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A + +G+ +HG+ + ++ + ALVDMYAK G + A ++FE++++ +V
Sbjct: 266 NACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIV 325
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEV---------QPDHITFVGVLSACSRGGLFDE 259
SWNA+I G +H H +AL+L +MK ++ + D VG++ S+ L ++
Sbjct: 326 SWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLED 385
Query: 260 GRMFF 264
RM F
Sbjct: 386 ARMAF 390
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 186/407 (45%), Gaps = 70/407 (17%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G+ + P A LV +Y+ L +A +F++I Q ++ WN +I + +E A+EL
Sbjct: 287 LGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALEL 346
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
++ R++H +++ E+D+FV L+DMY+K
Sbjct: 347 LGQM---------------------------KRQLHSSLMKMDMESDLFVSVGLVDMYSK 379
Query: 121 CSCVVNARQVFDKILERDP---------------------------------SEATLVTV 147
C + +AR F+ + E+D ++ TL T+
Sbjct: 380 CDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTI 439
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ ++A + + R++HG S + F ++ V +L+D Y KC V+ A +FE+ +
Sbjct: 440 LKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDL 499
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VS+ +MIT YA +G +AL LF +M+D E++PD +L+AC+ F++G+
Sbjct: 500 VSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVH 559
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGH 324
+++ Y + +V++ G +D+A ++ + G+ W A++ HGH
Sbjct: 560 ILK-YGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSEL---TERGIVSWSAMIGGLAQHGH 615
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMID 371
+ A ++ L+ + N++ L ++ A N G+ KL +
Sbjct: 616 GRQALQLFNQM--LKEGVSPNHITLVSVLG-ACNHAGLVTEAKLYFE 659
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 141/308 (45%), Gaps = 45/308 (14%)
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P + ++ L C ++ G +IH + ++ D + LI++Y+KC AR
Sbjct: 52 FTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYAR 111
Query: 129 QVFDKILERDP---------------------------------SEATLVTVISASADIA 155
++ D+ E D +E T +V+ A + +
Sbjct: 112 KLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVK 171
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L G+++HG FE +V V LV MYAKC ++ LF+++ E+ VVSWNA+ +
Sbjct: 172 DLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFS 231
Query: 216 GYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDE--GRMFFESMVR-DY 271
Y +A+ LF +M ++P+ + +++AC+ GL D G++ +++ Y
Sbjct: 232 CYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACT--GLRDSSRGKIIHGYLIKLGY 289
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
DP + +VD+ G L +A + +++ +PD W A++ C LH H E A
Sbjct: 290 DWDPFSAN--ALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVLHEH---HEQA 343
Query: 332 LEKLIELE 339
LE L +++
Sbjct: 344 LELLGQMK 351
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 116/248 (46%), Gaps = 25/248 (10%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFH + L+ Y C + +A ++F+ +L + +I AYA G E A++L+
Sbjct: 463 GFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLF 522
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ ++ L PD F L AC+ LSA E+G+++H +++ + D+F G +L++MYAKC
Sbjct: 523 LEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKC 582
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
+ +A + F ++ ER ++S SA I L Q HG F +K +
Sbjct: 583 GSIDDAGRAFSELTERG--------IVSWSAMIGGLAQ--HGHGRQALQLFNQMLKEGVS 632
Query: 182 -----LVDMYAKC---GLVKVARNLFEQLRE-----KRVVSWNAMITGYAMHGHSTKALD 228
LV + C GLV A+ FE + E + MI G +A++
Sbjct: 633 PNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVE 692
Query: 229 LFEKMKDE 236
L KM E
Sbjct: 693 LVNKMPFE 700
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/538 (40%), Positives = 321/538 (59%), Gaps = 34/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++ LV +YS CD L +A F+ +P+++L WN +I Y+ A+ L+ + + G
Sbjct: 396 VSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEG 455
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ + T LK+ + L + R++H +++ + +D++V +LID Y KCS V +A
Sbjct: 456 IGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAE 515
Query: 129 QVFDKI---------------------------------LERDPSEATLVTVISASADIA 155
++F++ +E P ++++A A+++
Sbjct: 516 RIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLS 575
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
A QG++LH ++ F L++ +LV+MYAKCG + A F +L E+ +VSW+AMI
Sbjct: 576 AFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIG 635
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G A HGH +AL LF +M K+ V P+HIT V VL AC+ GL E +++FESM +
Sbjct: 636 GLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFK 695
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P +HY CM+DLLG +G+++EA +L+ +M + + VWGALL + ++H V+L A E
Sbjct: 696 PMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEM 755
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L LEP +G +V+L+NIYA A WE VA++R+LM D +KK SWIEVK+K + FL
Sbjct: 756 LFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLV 815
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD SH EIYAKL L M +AGYVP E HDVE EK ++ HSE+LA+AFGL
Sbjct: 816 GDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGL 875
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I TP G + + KNL++C DCH A K+I KI REI VRD+NR+HHFKDG CSCGDYW
Sbjct: 876 IATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 201/407 (49%), Gaps = 43/407 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G+ + P A LV +Y+ L +A +F++I Q ++ WN +I + +E A+EL
Sbjct: 287 LGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALEL 346
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
++ G+ P+ FT ALKAC+ + E GR++H +++ E+D+FV L+DMY+K
Sbjct: 347 LGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSK 406
Query: 121 CSCVVNARQVFDKILERDP---------------------------------SEATLVTV 147
C + +AR F+ + E+D ++ TL T+
Sbjct: 407 CDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTI 466
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ ++A + + R++HG S + F ++ V +L+D Y KC V+ A +FE+ +
Sbjct: 467 LKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDL 526
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VS+ +MIT YA +G +AL LF +M+D E++PD +L+AC+ F++G+
Sbjct: 527 VSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVH 586
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGH 324
+++ Y + +V++ G +D+A ++ + G+ W A++ HGH
Sbjct: 587 ILK-YGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSEL---TERGIVSWSAMIGGLAQHGH 642
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMID 371
+ A ++ L+ + N++ L ++ A N G+ KL +
Sbjct: 643 GRQALQLFNQM--LKEGVSPNHITLVSVLG-ACNHAGLVTEAKLYFE 686
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 196/405 (48%), Gaps = 46/405 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P + L++LYS C A +L D + +L W+ LI YA NG A+ +
Sbjct: 86 GLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAF 145
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + +G+ + FTF LKACS + + G+++H V+ + +E DVFV L+ MYAKC
Sbjct: 146 HEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKC 205
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
++++++FD+I ER+ P+E +L +++
Sbjct: 206 DEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMV 265
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A + +G+ +HG+ + ++ + ALVDMYAK G + A ++FE++++ +V
Sbjct: 266 NACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIV 325
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNA+I G +H H +AL+L +MK + P+ T L AC+ GL + GR S+
Sbjct: 326 SWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSL 385
Query: 268 VR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
++ D D V +VD+ L++A + + + D W A+++ G+ +
Sbjct: 386 MKMDMESDLFVS--VGLVDMYSKCDLLEDA-RMAFNLLPEKDLIAWNAIIS-----GYSQ 437
Query: 327 LAE--LALEKLIELEPHDAG-NYVILSNIYARAANWEGVAKLRKL 368
E AL +E+ G N LS I A + V R++
Sbjct: 438 YWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQV 482
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 200/452 (44%), Gaps = 90/452 (19%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF +A LV +Y+ CD ++ +LFD IP+RN+ WN L Y A+ L+
Sbjct: 187 GFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLF 246
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
Y ++ G+ P+ F+ + AC+ L G+ IH +I+ ++ D F AL+DMYAK
Sbjct: 247 YEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKV 306
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +A VF+KI + D P+ TL + +
Sbjct: 307 GDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSAL 366
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A A + GR+LH + E ++ V LVDMY+KC L++ AR F L EK ++
Sbjct: 367 KACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLI 426
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGL----------- 256
+WNA+I+GY+ + +AL LF +M K+ + + T +L S GL
Sbjct: 427 AWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILK--STAGLQVVHVCRQVHG 484
Query: 257 ------FDEGRMFFESMVRDY----HIDPS-----------VQHYTCMVDLLGHSGRLDE 295
F S++ Y H++ + + +T M+ G+ +E
Sbjct: 485 LSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEE 544
Query: 296 ACDLIMQMR---VKPDPGVWGALLNSC----------KLHGHVKLAELALEKLIELEPHD 342
A L ++M+ +KPD V +LLN+C +LH H+ L+
Sbjct: 545 ALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIF------- 597
Query: 343 AGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
AGN ++ N+YA+ + + + + +RGI
Sbjct: 598 AGNSLV--NMYAKCGSIDDAGRAFSELTERGI 627
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P+ + ++S +L G ++H + + ++ L+++Y+KC AR L
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKL 113
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACS 252
++ E +VSW+A+I+GYA +G AL F +M V+ + TF VL ACS
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACS 168
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/546 (41%), Positives = 326/546 (59%), Gaps = 34/546 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + +A LVH+YS + +A +LFD +P R+ WN +I Y NG A+++
Sbjct: 23 LGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQNGNAAEALDI 82
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ G+ D T L C+ + I G+ IH VI++ E ++FV ALI+MYAK
Sbjct: 83 ADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAK 142
Query: 121 CSCVVNARQVFDKIL---------------------------------ERDPSEATLVTV 147
+ +A++VF ++ E P++ T V++
Sbjct: 143 FGSLGHAQKVFGLLIKDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSI 202
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A + + AL QG +HG ++ +V V T L+DMY KCG + A +LF Q+ K
Sbjct: 203 LPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNS 262
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V WNAMI+ Y +HG KAL+LF +MK E V+PDHITFV +LSACS GL + + F
Sbjct: 263 VPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNM 322
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M +Y I PS++HY CMVDL G +G L+ A + I +M ++PD WGALLN+C++HG+++
Sbjct: 323 MEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIE 382
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
L + A E+L E++ + G YV+LSNIYA WEGV +R L DRG++K+ S I +
Sbjct: 383 LGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSSIILN 442
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
NK F +G+ +HP C+EIY +L+ L ++K GYVP V DVE DEK +++ HSE
Sbjct: 443 NKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVPDFCFVLQDVEEDEKEHILMGHSE 502
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
RLAIA+G+I+T T + I KNL++C DCH KFIS ITEREI VRD +R+HHFK G C
Sbjct: 503 RLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTKFISIITEREIIVRDSSRFHHFKGGTC 562
Query: 507 SCGDYW 512
SCGDYW
Sbjct: 563 SCGDYW 568
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 154/298 (51%), Gaps = 44/298 (14%)
Query: 77 PFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILE 136
P +KAC L +G++IH V++ +E DVFV A+L+ MY++ V +AR++FD +
Sbjct: 1 PPVVKACGDLL---DGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPA 57
Query: 137 RD----------------PSEA-----------------TLVTVISASADIAALPQGREL 163
RD +EA T+ +V+ A + + G+ +
Sbjct: 58 RDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLI 117
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
H + +H E + V AL++MYAK G + A+ +F L K VVSWN +ITGYA +G +
Sbjct: 118 HLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLA 176
Query: 224 TKALDLFEKMK--DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYT 281
++A++++ M+ +E+ P+ T+V +L A S G +G ++++ + V T
Sbjct: 177 SEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNC-LYSDVFVGT 235
Query: 282 CMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
C++D+ G G+LD+A L Q+ K + W A+++ +HG E ALE E++
Sbjct: 236 CLIDMYGKCGKLDDAISLFYQVPRK-NSVPWNAMISCYGVHGD---GEKALELFREMK 289
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 104/197 (52%), Gaps = 10/197 (5%)
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V+ A D L G+++H + FE +V V +LV MY++ GLV AR LF+ + +
Sbjct: 3 VVKACGD---LLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
SWNAMI+GY +G++ +ALD+ ++M+ E V+ D IT VL C++ G G++
Sbjct: 60 RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHL 119
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
+++ + ++ + ++++ G L A + + +K D W L+ +G
Sbjct: 120 YVIK-HGLEFELFVSNALINMYAKFGSLGHA-QKVFGLLIK-DVVSWNTLITGYAQNG-- 174
Query: 326 KLAELALEKLIELEPHD 342
LA A+E + +E H+
Sbjct: 175 -LASEAIEVYLLMEEHE 190
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/522 (43%), Positives = 318/522 (60%), Gaps = 35/522 (6%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
AHQLF+ IPQ ++ L+N + R Y+ + AI L+ + L L+PD++TFP LKAC
Sbjct: 80 AHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVV 139
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER-------- 137
A ++G+++H I+ + +V LI+MYA C+ V A++VFD+ILE
Sbjct: 140 AKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAI 199
Query: 138 -------------------------DPSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
P++ T+++V+S+ A + AL G+ +H + ++
Sbjct: 200 ITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGL 259
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
+ VKV TAL+DMYAKCG + A ++FE + + +W+AMI YAMHG + +FE+
Sbjct: 260 DKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEE 319
Query: 233 M-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
M + +VQPD ITF+G+L ACS GL DEG +F SM Y I P ++HY CMVDLLG +G
Sbjct: 320 MARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAG 379
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSN 351
L EA I ++ +KP P +W LL+SC HG+++LA+ + +++EL+ G+YVILSN
Sbjct: 380 LLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSN 439
Query: 352 IYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKW 411
+ ARA WE V LRKLMI +G K CS IEV N H F SGD H ++ L
Sbjct: 440 LCARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDE 499
Query: 412 LEGRMKEAGYVPGTESVFH-DVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLK 470
L +K GYVP T V H D+E++EK + HSE+LAI+FGL+NTP GT + + KNL+
Sbjct: 500 LVKELKSVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKNLR 559
Query: 471 ICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+C DCH A K IS + +REI +RDV R+HHFKDG CSCGDYW
Sbjct: 560 VCGDCHSAAKLISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 131/294 (44%), Gaps = 35/294 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G +P + L+++Y+ C+ + A ++FD I + + +N +I YA + A+ L
Sbjct: 156 LGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSL 215
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ +L L P++ T L +C+ L A++ G+ IHE V +N + V V ALIDMYAK
Sbjct: 216 FRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAK 275
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + A VF+ + RD P E T + +
Sbjct: 276 CGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGL 335
Query: 148 ISASADIAALPQG-RELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+ A + + +G R + S + +K +VD+ + GL+ A ++L K
Sbjct: 336 LYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKP 395
Query: 207 V-VSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDE 259
+ W +++ + HG+ A + ++ + +V + + C+R G +++
Sbjct: 396 TPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCARAGKWED 449
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/534 (39%), Positives = 320/534 (59%), Gaps = 34/534 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
+V + + + ++FD + +R++ WN L+ A G + A+ ++ G PD
Sbjct: 110 IVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPD 169
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+FT L + + ++ G +H RN +++DVFVG++LIDMYA C+ + +VFD
Sbjct: 170 SFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFD 229
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
+ RD P T ++I ++A+L
Sbjct: 230 NLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRF 289
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G++LH + FE NV + ++L+DMY KCG + +A +F+++ VVSW AMI GYA+
Sbjct: 290 GKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYAL 349
Query: 220 HGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
HG + +AL LFE+M+ +P+HITF+ VL+ACS GL D+G +F+SM Y I P+++
Sbjct: 350 HGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLE 409
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
H+ + D LG +G LDEA + I +M++KP VW LL +C++H + LAE +K++EL
Sbjct: 410 HFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMEL 469
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDAS 398
EP G++V+LSN+Y+ + W A LR+ M +G+KK ACSWIEVK+K H F++ D S
Sbjct: 470 EPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRS 529
Query: 399 HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTP 458
HP D I L +M G+VP TE VF D+E + K+ ++C HSE+LAI FG+I+TP
Sbjct: 530 HPWYDRIIDALNAFSEQMAREGHVPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTP 589
Query: 459 DGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
GT++ + KNL++C DCH KFISK+ +REI VRD NR+HHFKDG CSCGD+W
Sbjct: 590 AGTKIRVMKNLRVCIDCHTVTKFISKLADREIVVRDANRFHHFKDGNCSCGDFW 643
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 153/350 (43%), Gaps = 57/350 (16%)
Query: 41 WNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNF--TFPFALKACSALSAIEEGRRIHED 98
W IRA A G + A+ L+ R+ + + P ALK+C+AL G +H
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75
Query: 99 VIRNKWETDVFVGAALIDMYAKCSCVV-------------------NARQVFDKILERD- 138
IR+ D F AL+++Y K C + R+VFD+++ERD
Sbjct: 76 AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135
Query: 139 --------------------------------PSEATLVTVISASADIAALPQGRELHGF 166
P TL TV+ A+ A + +G E+HGF
Sbjct: 136 VSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGF 195
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
++R+ F+ +V V ++L+DMYA C + +F+ L + + WN+++ G A +G +A
Sbjct: 196 AFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEA 255
Query: 227 LDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
L +F +M + V+P +TF ++ C G+ ++ D +V + ++D
Sbjct: 256 LGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFED-NVFISSSLID 314
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+ G + A + +M PD W A++ LHG + A + E++
Sbjct: 315 MYCKCGEISIAHCIFDKMS-SPDVVSWTAMIMGYALHGPAREALVLFERM 363
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/547 (40%), Positives = 326/547 (59%), Gaps = 37/547 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G F ++ L+++Y+ L +A + F ++ ++ WN +I AY N A +
Sbjct: 346 GLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFF 405
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAK 120
++ G PD T + + R +H ++R W DV +G A++DMYAK
Sbjct: 406 VKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAK 465
Query: 121 CSCVVNARQVFDKILERD----------------------------------PSEATLVT 146
+ +A +VF+ I +D P++ T V+
Sbjct: 466 LGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVS 525
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ A A + AL QG ++HG + L+V V T L+D+Y KCG + A +LF Q+ ++
Sbjct: 526 ILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQES 585
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V+WNA+I+ + +HGH+ K L LF +M DE V+PDH+TFV +LSACS G +EG+ F
Sbjct: 586 SVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFR 645
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
M ++Y I PS++HY CMVDLLG +G L+ A D I M ++PD +WGALL +C++HG++
Sbjct: 646 LM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNI 704
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+L + A ++L E++ + G YV+LSNIYA WEGV K+R L +RG+KK+ S IEV
Sbjct: 705 ELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEV 764
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
K F +G+ SHP C EIY +L+ L +MK GY+P V DVE DEK +++ HS
Sbjct: 765 NRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHS 824
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
ERLAIAFG+I+TP + + I KNL++C DCH A KFIS+IT+REI VRD NR+HHFKDGI
Sbjct: 825 ERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGI 884
Query: 506 CSCGDYW 512
CSCGDYW
Sbjct: 885 CSCGDYW 891
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 122/416 (29%), Positives = 200/416 (48%), Gaps = 41/416 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF ++ +A L+H+YS A LFD +P R++ WN +I NG A+++
Sbjct: 244 LGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDV 303
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ G+ + T L C L I IH VI++ E D+FV ALI+MYAK
Sbjct: 304 LDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAK 363
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ +AR+ F ++ D P TLV++
Sbjct: 364 FGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSL 423
Query: 148 ISASADIAALPQGRELHGFSWRHRFEL-NVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
S A R +HGF R + + +V + A+VDMYAK GL+ A +FE + K
Sbjct: 424 ASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKD 483
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKD--EVQPDHITFVGVLSACSRGGLFDEGRMFF 264
V+SWN +ITGYA +G +++A+++++ M++ E+ P+ T+V +L A + G +G
Sbjct: 484 VISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIH 543
Query: 265 ESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+++ + H+D V TC++D+ G GRL +A L Q+ + W A+++ +HG
Sbjct: 544 GRVIKTNLHLDVFVA--TCLIDVYGKCGRLVDAMSLFYQVP-QESSVTWNAIISCHGIHG 600
Query: 324 HV-KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
H K +L E L E D +V L + + + E +LM + GIK S+
Sbjct: 601 HAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSL 656
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 173/366 (47%), Gaps = 44/366 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++T+LV+LY+ + + FD+IPQ++++ WN +I AY NG + AI +Y+LL +
Sbjct: 153 ISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVS 212
Query: 69 LV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
+ PD +TFP LKAC L +GR+IH + ++ +VFV A+LI MY++ A
Sbjct: 213 EIRPDFYTFPPVLKACGTLV---DGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIA 269
Query: 128 RQVFDKILERDPSE---------------------------------ATLVTVISASADI 154
R +FD + RD T+V+++ +
Sbjct: 270 RSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQL 329
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
+ +H + +H E ++ V AL++MYAK G ++ AR F+Q+ VVSWN++I
Sbjct: 330 GDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSII 389
Query: 215 TGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
Y + A F KM+ + QPD +T V + S ++ R ++R +
Sbjct: 390 AAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWL 449
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
V +VD+ G LD A + + VK D W L+ +G LA A+E
Sbjct: 450 MEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVK-DVISWNTLITGYAQNG---LASEAIE 505
Query: 334 --KLIE 337
K++E
Sbjct: 506 VYKMME 511
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK-- 232
++ + T LV++YA G V ++R F+Q+ +K V +WN+MI+ Y +GH +A+ F +
Sbjct: 150 SIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLL 209
Query: 233 MKDEVQPDHITFVGVLSACSRGGLFDEGR 261
+ E++PD TF VL AC G +GR
Sbjct: 210 LVSEIRPDFYTFPPVLKAC---GTLVDGR 235
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/548 (39%), Positives = 332/548 (60%), Gaps = 37/548 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFD--RIPQRNLFLWNVLIRAYAWNGPYEVAI 58
+GF + L+ LY+ C L A +F+ +P+R + W ++ AYA NG A+
Sbjct: 148 LGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEAL 207
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
E++ ++ ++ + PD L A + L +E+GR IH V++ ET+ + +L MY
Sbjct: 208 EIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMY 267
Query: 119 AKCSCVVNARQVFDKI-------------------------------LERD--PSEATLV 145
AKC V A+ +FDK+ + +D P ++
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISIT 327
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+ ISA A + +L Q R + + R + +V + +AL+DM+AKCG V+ AR++F++ ++
Sbjct: 328 SAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDR 387
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
VV W+AMI GY +HG + +A+ L+ M +D V P+ +TF+G+L AC+ G+ EG FF
Sbjct: 388 DVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFF 447
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
M D+ I+P QHY C++DLLG +G LD+A ++I M V+P VWGALL++CK H H
Sbjct: 448 NRMA-DHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRH 506
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
V+L + A ++L ++P + G+YV LSN+YA A W+ VA++R M ++G+ K + CSW+E
Sbjct: 507 VELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVE 566
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
V+ + F GD SHP +EI +++W+E R+KE G+V ++ HD+ ++E +C H
Sbjct: 567 VRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSH 626
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SER+ IA+GLI+TP GT L ITKNL+ C +CH A K ISK+ REI VRD NR+HHFKDG
Sbjct: 627 SERITIAYGLISTPQGTTLRITKNLRACVNCHAATKLISKLVGREIVVRDTNRFHHFKDG 686
Query: 505 ICSCGDYW 512
+CSCGDYW
Sbjct: 687 VCSCGDYW 694
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 196/382 (51%), Gaps = 44/382 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G F L TKL+H S+ + A Q+FD +P+ +F WN +IR Y+ N ++ A+ +
Sbjct: 47 LGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLM 106
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
Y ++ + PD+FTFP LKAC LS ++ GR +H V R +E DVFV LI +YAK
Sbjct: 107 YSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAK 166
Query: 121 CSCVVNARQVFD--KILER----------------DPSEA-----------------TLV 145
C + AR VF+ + ER +P EA LV
Sbjct: 167 CRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALV 226
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+V++A + L QGR +H + E + +L MYAKCG V A+ LF++++
Sbjct: 227 SVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSP 286
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
++ WNAMI+GYA +G + A+DLF +M +V+PD I+ +SAC++ G ++ R
Sbjct: 287 NLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMD 346
Query: 265 ESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
E + R DY D + + ++D+ G + E + + D VW A++ LHG
Sbjct: 347 EYVSRSDYRDDVFIS--SALIDMFAKCGSV-ECARSVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 324 HVKLAELALEKLIE---LEPHD 342
+ A ++L + +E + P+D
Sbjct: 404 QAREA-ISLYRAMERDGVHPND 424
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 142/276 (51%), Gaps = 13/276 (4%)
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
+++ RLL +GL F + A S+ I R++ +D+ R + VF A+I Y
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQ----VFPWNAIIRGY 94
Query: 119 AKCSCVVNARQVFDKI-LER-DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
++ + +A ++ K+ L R P T ++ A ++ L GR +H +R FE +V
Sbjct: 95 SRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADV 154
Query: 177 KVKTALVDMYAKCGLVKVARNLFE--QLREKRVVSWNAMITGYAMHGHSTKALDLFEKM- 233
V+ L+ +YAKC + AR +FE L E+ +VSW A+++ YA +G +AL++F +M
Sbjct: 155 FVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMR 214
Query: 234 KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGR 292
K +V+PD + V VL+A + ++GR S+++ +P + + + G+
Sbjct: 215 KMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDL--LISLNTMYAKCGQ 272
Query: 293 LDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ A L +M+ P+ +W A+++ +G K A
Sbjct: 273 VATAKILFDKMK-SPNLILWNAMISGYAKNGFAKDA 307
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/547 (40%), Positives = 325/547 (59%), Gaps = 37/547 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G F ++ L+++Y+ L +A + F ++ ++ WN +I AY N A +
Sbjct: 346 GLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFF 405
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAK 120
++ G PD T + + R +H ++R W DV +G A++DMYAK
Sbjct: 406 VKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAK 465
Query: 121 CSCVVNARQVFDKILERD----------------------------------PSEATLVT 146
+ +A +VF+ IL +D P++ T V+
Sbjct: 466 LGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVS 525
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ A A + AL QG +HG + L+V V T L+D+Y KCG + A +LF Q+ ++
Sbjct: 526 ILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQES 585
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V+WNA+I+ + +HGH+ K L LF +M DE V+PDH+TFV +LSACS G +EG+ F
Sbjct: 586 SVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFR 645
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
M ++Y I PS++HY CMVDLLG +G L+ A I M ++PD +WGALL +C++HG++
Sbjct: 646 LM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNI 704
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+L + A ++L E++ + G YV+LSNIYA WEGV K+R L +RG+KK+ S IEV
Sbjct: 705 ELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEV 764
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
K F +G+ SHP C EIY +L+ L +MK GY+P V DVE DEK +++ HS
Sbjct: 765 NRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHS 824
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
ERLAIAFG+I+TP + + I KNL++C DCH A KFIS+IT+REI VRD NR+HHFKDGI
Sbjct: 825 ERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGI 884
Query: 506 CSCGDYW 512
CSCGDYW
Sbjct: 885 CSCGDYW 891
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 200/416 (48%), Gaps = 41/416 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF ++ +A L+H+YS A LFD +P R++ WN +I NG A+++
Sbjct: 244 LGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDV 303
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ G+ + T L C L I IH VI++ E D+FV ALI+MYAK
Sbjct: 304 LDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAK 363
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ +AR+ F ++ D P TLV++
Sbjct: 364 FGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSL 423
Query: 148 ISASADIAALPQGRELHGFSWRHRFEL-NVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
S A R +HGF R + + +V + A+VDMYAK GL+ A +FE + K
Sbjct: 424 ASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKD 483
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKD--EVQPDHITFVGVLSACSRGGLFDEG-RMF 263
V+SWN +ITGYA +G +++A+++++ M++ E+ P+ T+V +L A + G +G R+
Sbjct: 484 VISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIH 543
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+ + H+D V TC++D+ G GRL +A L Q+ + W A+++ +HG
Sbjct: 544 GRVIKTNLHLDVFVA--TCLIDVYGKCGRLVDAMSLFYQVP-QESSVTWNAIISCHGIHG 600
Query: 324 HV-KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
H K +L E L E D +V L + + + E +LM + GIK S+
Sbjct: 601 HAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSL 656
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 173/366 (47%), Gaps = 44/366 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++T+LV+LY+ + + FD+IPQ++++ WN +I AY NG + AI +Y+LL +
Sbjct: 153 ISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVS 212
Query: 69 LV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
+ PD +TFP LKAC L +GRRIH + ++ +VFV A+LI MY++ A
Sbjct: 213 EIRPDFYTFPPVLKACGTLV---DGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIA 269
Query: 128 RQVFDKILERDPSE---------------------------------ATLVTVISASADI 154
R +FD + RD T+V+++ +
Sbjct: 270 RSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQL 329
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
+ +H + +H E ++ V AL++MYAK G ++ AR F+Q+ VVSWN++I
Sbjct: 330 GDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSII 389
Query: 215 TGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
Y + A F KM+ + QPD +T V + S ++ R ++R +
Sbjct: 390 AAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWL 449
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
V +VD+ G LD A + + VK D W L+ +G LA A+E
Sbjct: 450 MEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVK-DVISWNTLITGYAQNG---LASEAIE 505
Query: 334 --KLIE 337
K++E
Sbjct: 506 VYKMME 511
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK-- 232
++ + T LV++YA G V ++R F+Q+ +K V +WN+MI+ Y +GH +A+ F +
Sbjct: 150 SIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLL 209
Query: 233 MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGR 292
+ E++PD TF VL AC G L D R+ + + + V ++ + G
Sbjct: 210 LVSEIRPDFYTFPPVLKAC--GTLVDGRRIHCWAFKLGFQWNVFVA--ASLIHMYSRFGF 265
Query: 293 LDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
A L M + D G W A+++ +G+ A L+++
Sbjct: 266 TGIARSLFDDMPFR-DMGSWNAMISGLIQNGNAAQALDVLDEM 307
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/526 (40%), Positives = 330/526 (62%), Gaps = 28/526 (5%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++ T+LVH+YS C L+ A ++F+R+ +RN + WN +I Y NG + A+ L+ ++
Sbjct: 314 IVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLN 373
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ PD F+ L +C +LS ++GR +H ++RN E + + L+DMYAKC + A
Sbjct: 374 GIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYA 433
Query: 128 RQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL------------- 174
+V+D+ +++D + A ++++ A+ + L S+ H E+
Sbjct: 434 WKVYDQTIKKDRNTALWNSILAGYAN-------KGLKKESFNHFLEMLESDIEYDVLTMV 486
Query: 175 ---NVKV-KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
N+ V +TALVDMY+KCG + AR +F+ + K +VSWNAMI+GY+ HG S +AL L+
Sbjct: 487 TIVNLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILY 546
Query: 231 EKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGH 289
E+M K + P+ +TF+ +LSACS GL +EG F SM DY+I+ +HYTCMVDLLG
Sbjct: 547 EEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGR 606
Query: 290 SGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVIL 349
+GRL++A + + +M ++P+ WGALL +C++H + + LA ++L EL+P + G YVI+
Sbjct: 607 AGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIM 666
Query: 350 SNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKL 409
SNIYA A W+ V +R++M +G+KK SWIE+ ++ F +G +HP +EIY L
Sbjct: 667 SNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNL 726
Query: 410 KWLEGRMKEAGYVPGTESVFH---DVENDEKANMICCHSERLAIAFGLINTPDGTRLLIT 466
+ L + K GY+P T + D++ +E+ + HSERLA++ GLI+ P + + +
Sbjct: 727 RHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVF 786
Query: 467 KNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
KNL+IC DCH A KFISKIT R I RD NR+HHF++G CSCGDYW
Sbjct: 787 KNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 186/355 (52%), Gaps = 43/355 (12%)
Query: 4 GFHP--VLATKLVHLYSACDCLHN---AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAI 58
G++P L TK++ LY+ CL + A +LF+ +P+RNL WN +I AYA Y A
Sbjct: 101 GYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAW 160
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
++ R+L+IG+ PDNFTF AL+ C AL + + G+++H +I ++ D FVG ALIDMY
Sbjct: 161 GIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMY 220
Query: 119 AKCSCVVNARQVFDKILERD-----------------------------------PSEAT 143
AKC + +VFD++ ER+ P + T
Sbjct: 221 AKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFT 280
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
T+++ A+ QGR++H R N+ V+T LV MY++CG + A+ +F ++
Sbjct: 281 FTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMA 340
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRM 262
E+ SWN+MI GY +G + +AL LF++M+ + ++PD + +LS+C +GR
Sbjct: 341 ERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRE 400
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ-MRVKPDPGVWGALL 316
+VR+ + + +VD+ G +D A + Q ++ + +W ++L
Sbjct: 401 LHNFIVRNTMEEEGILQ-VVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSIL 454
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 143/304 (47%), Gaps = 44/304 (14%)
Query: 76 FPFA--LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN---ARQV 130
P++ ++ C ++ + G+ IH +I N + D ++ ++ +YA+ C+ + AR++
Sbjct: 72 LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKL 131
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F+++ ER+ P T + + + +
Sbjct: 132 FEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSR 191
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
G+++H F+ + V AL+DMYAKC + +F+++ E+ V+WN++I+
Sbjct: 192 DGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAE 251
Query: 218 AMHGHSTKALDLFEKMK---DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
A GH AL LF +M+ D +QPD TF +L+ C+ ++GR ++R +I
Sbjct: 252 AQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIR-ANIT 310
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
++ T +V + GRL+ A ++ +M + + W +++ + +G + A L L K
Sbjct: 311 KNIIVETELVHMYSECGRLNYAKEIFNRM-AERNAYSWNSMIEGYQQNGETQEA-LRLFK 368
Query: 335 LIEL 338
++L
Sbjct: 369 QMQL 372
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/548 (39%), Positives = 333/548 (60%), Gaps = 37/548 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFD--RIPQRNLFLWNVLIRAYAWNGPYEVAI 58
+GF + L+ LY+ C L +A +F+ +P+R + W ++ AYA NG A+
Sbjct: 148 LGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEAL 207
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
E++ + ++ + PD L A + L +++GR IH V++ E + + +L MY
Sbjct: 208 EIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMY 267
Query: 119 AKCSCVVNARQVFDKI-------------------------------LERD--PSEATLV 145
AKC V A+ +FDK+ + +D P ++
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+ ISA A + +L Q R ++ + R + +V + +AL+DM+AKCG V+ AR +F++ ++
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
VV W+AMI GY +HG + +A+ L+ M + V P+ +TF+G+L AC+ G+ EG FF
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
M D+ I+P QHY C++DLLG +G LD+A ++I M V+P VWGALL++CK H H
Sbjct: 448 NLMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRH 506
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
V+L E A ++L ++P + G+YV LSN+YA A W+ VA++R M ++G+ K + CSW+E
Sbjct: 507 VELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVE 566
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
V+ + AF GD SHP +EI +++W+E R+KE G+V ++ HD+ ++E +C H
Sbjct: 567 VRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSH 626
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SER+AIA+GLI+TP GT L ITKNL+ C +CH A K ISK+ +REI VRD NR+HHFKDG
Sbjct: 627 SERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDG 686
Query: 505 ICSCGDYW 512
+CSCGDYW
Sbjct: 687 VCSCGDYW 694
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 199/382 (52%), Gaps = 44/382 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G F L TKL+H S+ + A Q+FD +P+ +F WN +IR Y+ N ++ A+ +
Sbjct: 47 LGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLM 106
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
Y + + PD+FTFP LKACS LS ++ GR +H V R ++ DVFV LI +YAK
Sbjct: 107 YSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAK 166
Query: 121 CSCVVNARQVFDKI-----------------------------------LERDPSEATLV 145
C + +AR VF+ + ++ P LV
Sbjct: 167 CRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALV 226
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+V++A + L QGR +H + E+ + +L MYAKCG V A+ LF++++
Sbjct: 227 SVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSP 286
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
++ WNAMI+GYA +G++ +A+D+F +M +V+PD I+ +SAC++ G ++ R +
Sbjct: 287 NLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMY 346
Query: 265 ESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
E + R DY D + + ++D+ G + E L+ + D VW A++ LHG
Sbjct: 347 EYVGRSDYRDDVFIS--SALIDMFAKCGSV-EGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 324 HVKLAELALEKLIE---LEPHD 342
+ A ++L + +E + P+D
Sbjct: 404 RAREA-ISLYRAMERGGVHPND 424
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 141/276 (51%), Gaps = 13/276 (4%)
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
+++ RLL +GL F + A S+ I R++ +D+ R + +F A+I Y
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQ----IFPWNAIIRGY 94
Query: 119 AKCSCVVNARQVFD--KILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
++ + +A ++ ++ P T ++ A + ++ L GR +H +R F+ +V
Sbjct: 95 SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 177 KVKTALVDMYAKCGLVKVARNLFE--QLREKRVVSWNAMITGYAMHGHSTKALDLFEKM- 233
V+ L+ +YAKC + AR +FE L E+ +VSW A+++ YA +G +AL++F M
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMR 214
Query: 234 KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGR 292
K +V+PD + V VL+A + +GR S+V+ I+P + + + G+
Sbjct: 215 KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL--LISLNTMYAKCGQ 272
Query: 293 LDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ A L +M+ P+ +W A+++ +G+ + A
Sbjct: 273 VATAKILFDKMK-SPNLILWNAMISGYAKNGYAREA 307
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/538 (40%), Positives = 331/538 (61%), Gaps = 36/538 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y++ + +A +LFD IP +++ WN +I YA G Y+ A+EL+ +++ +
Sbjct: 204 TALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIR 263
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD T + AC+ +IE GR++H + + + +++ + +L+D+Y+KC + A +
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGL 323
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F+ +L +D P++ T+++++ A A + A+
Sbjct: 324 FEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAI 383
Query: 158 PQGRELHGF-SWRHRFELNVK-VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
GR +H + R + N ++T+L+DMYAKCG ++ A +F + K + SWNAMI
Sbjct: 384 DIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 443
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+AMHG + A D+F +M K ++PD ITFVG+LSACSR G+ D GR F +M +DY I
Sbjct: 444 GFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKIT 503
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY CM+DLLGHSG EA ++I M ++PD +W +LL +CK+ G+V+L E +
Sbjct: 504 PKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQN 563
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
LI++EP + G YV+LSNIYA A W VAK+R L+ D+G+KK CS IE+ + H F+
Sbjct: 564 LIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFII 623
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD HP EIY L+ +E +++AG+VP T V ++E + K + HSE+LAIAFGL
Sbjct: 624 GDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGL 683
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I+T GT+L I KNL++C +CH A K ISKI +REI RD R+HHF+DG+CSC DYW
Sbjct: 684 ISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 186/408 (45%), Gaps = 100/408 (24%)
Query: 21 DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
D L A +F+ I + NL +WN + R +A + A++LY ++ +GL+P+++TFPF L
Sbjct: 82 DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLL 141
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ----------- 129
K+C+ A +EG++IH V++ ++ D+FV +LI +Y + + +AR+
Sbjct: 142 KSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVV 201
Query: 130 --------------------VFDKILERD------------------------------- 138
+FD+I +D
Sbjct: 202 SYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTN 261
Query: 139 --PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
P E+T+VTV+SA A ++ GR++H + H F N+K+ +L+D+Y+KCG ++ A
Sbjct: 262 IRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETAC 321
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGG 255
LFE L K V+SWN +I GY +AL LF++M + +P+ +T + +L AC+ G
Sbjct: 322 GLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLG 381
Query: 256 LFDEGRMFF------------ESMVRDYHID--------------------PSVQHYTCM 283
D GR S +R ID S+ + M
Sbjct: 382 AIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAM 441
Query: 284 VDLLGHSGRLDEACDLIMQMR---VKPDPGVWGALLNSCKLHGHVKLA 328
+ GR D A D+ +MR ++PD + LL++C G + L
Sbjct: 442 IFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLG 489
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 142/307 (46%), Gaps = 40/307 (13%)
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
++ ++++ GL N+ L+ C +S +G V E ++ + + +A
Sbjct: 52 IHAQMIKTGLHNTNYALSKLLELC-VISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHA 110
Query: 120 KCSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
S V+A +++ ++ P+ T ++ + A A +G+++HG + ++L++
Sbjct: 111 LSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLF 170
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA------------------------- 212
V T+L+ +Y + G ++ AR +F++ + VVS+ A
Sbjct: 171 VHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKD 230
Query: 213 ------MITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
MI+GYA G+ +AL+LF E MK ++PD T V V+SAC++ G + GR
Sbjct: 231 VVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQ-VH 289
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
S + D+ +++ ++DL G L+ AC L + K D W L+ + H+
Sbjct: 290 SWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYK-DVISWNTLIGG---YTHM 345
Query: 326 KLAELAL 332
L + AL
Sbjct: 346 NLYKEAL 352
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T L+ +Y+ C + AHQ+F+ I ++L WN +I +A +G + A +++ R+ +IG
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIG 465
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN-KWETDVFVGAALIDMYAKCSCVVNA 127
+ PD+ TF L ACS ++ GR I + ++ K + +ID+ A
Sbjct: 466 IEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEA 525
Query: 128 RQVFDKILERDPSEATLVTVISA 150
++ + +E +P +++ A
Sbjct: 526 EEMINN-MEMEPDGVIWCSLLKA 547
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/615 (39%), Positives = 334/615 (54%), Gaps = 104/615 (16%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYA------------ 49
GF + + LVH+Y C+ + +AH++FDR+ + ++ W+ L+ AYA
Sbjct: 144 GFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLF 203
Query: 50 --------------WNGP---------YEVAIELYYRLLEIGLVPDNFTFPFALKACSAL 86
WNG Y A+ ++ + G PD T L A L
Sbjct: 204 SEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDL 263
Query: 87 SAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI------------ 134
+ G IH VI+ +D V +ALIDMY KCSC QVFD++
Sbjct: 264 EDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFI 323
Query: 135 --LERDPS-EATL------------VTVISASADIAALPQ-GRE---------------- 162
L R+ E++L + V+S ++ IA Q GR+
Sbjct: 324 FGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVK 383
Query: 163 -------------------LHG-----FSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
+HG FS R +V V +AL+DMYAKCG ++ +R
Sbjct: 384 PNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRIC 443
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLF 257
F+ + K +V WNA+I GYAMHG + +A+++F+ M+ Q PD I+F VLSACS+ GL
Sbjct: 444 FDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLT 503
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
+EG +F SM Y I+ V+HY CMV LL +G+L++A +I +M V PD VWGALL+
Sbjct: 504 EEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLS 563
Query: 318 SCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKS 377
SC++H +V L E+A EKL ELEP + GNY++LSNIYA W V ++R +M ++G++K+
Sbjct: 564 SCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKN 623
Query: 378 IACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEK 437
CSWIEVKNK H L+GD SHP +I KL L MK+ GY P V DVE +K
Sbjct: 624 PGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDK 683
Query: 438 ANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNR 497
++C HSE+LA+ FGL+NTP G L + KNL+IC DCH+ IKFIS REI VRD NR
Sbjct: 684 EQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDTNR 743
Query: 498 YHHFKDGICSCGDYW 512
+HHFK+G CSCGDYW
Sbjct: 744 FHHFKEGACSCGDYW 758
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 151/328 (46%), Gaps = 54/328 (16%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
LATKL+ Y+ C +A + D +P+ N+F ++ LI A++ + A+ + ++L G
Sbjct: 50 LATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRG 109
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L+PDN P A+KAC+ LSA++ R++H + +++D FV ++L+ MY KC+ + +A
Sbjct: 110 LMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAH 169
Query: 129 QVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
+VFD++ E D SW +ALV YA+
Sbjct: 170 RVFDRMFEPDV--------------------------VSW-----------SALVAAYAR 192
Query: 189 CGLVKVARNLFEQLREKRV----VSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHIT 243
G V A+ LF ++ + V +SWN MI G+ G ++A+ +F M +PD T
Sbjct: 193 QGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTT 252
Query: 244 FVGVLSACSR-----GGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
VL A G+ G + + +V D + + ++D+ G E
Sbjct: 253 ISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVS------SALIDMYGKCSCTSEMSQ 306
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+ QM D G A + +G V+
Sbjct: 307 VFDQMD-HMDVGSCNAFIFGLSRNGQVE 333
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 142/294 (48%), Gaps = 25/294 (8%)
Query: 105 ETDVFVGAALIDMYAKCSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRE 162
E +VF + LI ++K +A F ++L R P L + + A A ++AL R+
Sbjct: 76 EPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQ 135
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
+HG + F+ + V+++LV MY KC ++ A +F+++ E VVSW+A++ YA G
Sbjct: 136 VHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGC 195
Query: 223 STKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM-VRDYHIDPSVQHY 280
+A LF +M D VQP+ I++ G+++ + GL+ E + F M +R + D
Sbjct: 196 VDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDG----- 250
Query: 281 TCMVDLLGHSGRLDEACDLIMQMRVK---------PDPGVWGALLNSCKLHGHVKLAELA 331
T + +L G L+ DL+M + + D V AL++ ++G
Sbjct: 251 TTISSVLPAVGDLE---DLVMGILIHGYVIKQGLVSDKCVSSALID---MYGKCSCTSEM 304
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+ +++ D G+ +R E +L + + D+G++ ++ SW +
Sbjct: 305 SQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVV-SWTSM 357
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/574 (38%), Positives = 327/574 (56%), Gaps = 69/574 (12%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL------- 60
++ LV Y+ C + A + F I Q +L WN ++ YA G +E AIEL
Sbjct: 399 LVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQ 458
Query: 61 ----------------------------YYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ R+ +G+ P+ T AL AC + ++ G
Sbjct: 459 GIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLG 518
Query: 93 RRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP------------- 139
+ IH V+RN E VG+ALI MY+ C + A VF ++ RD
Sbjct: 519 KEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQS 578
Query: 140 --------------------SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
+ T+V+ + A + +AAL QG+E+H F R + +
Sbjct: 579 GRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFIL 638
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQ 238
+L+DMY +CG ++ +R +F+ + ++ +VSWN MI+ Y MHG A++LF++ + ++
Sbjct: 639 NSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLK 698
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
P+HITF +LSACS GL +EG +F+ M +Y +DP+V+ Y CMVDLL +G+ +E +
Sbjct: 699 PNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLE 758
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN 358
I +M +P+ VWG+LL +C++H + LAE A L ELEP +GNYV+++NIY+ A
Sbjct: 759 FIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGR 818
Query: 359 WEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKE 418
WE AK+R LM +RG+ K CSWIEVK K H+F+ GD SHP ++I AK++ L +KE
Sbjct: 819 WEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKE 878
Query: 419 AGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIA 478
GYVP T V DV+ DEK +C HSE++A+AFGLI+T GT L I KNL++C DCH A
Sbjct: 879 IGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSA 938
Query: 479 IKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
KFISK+ +R+I +RD R+HHF DG+CSCGDYW
Sbjct: 939 TKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 162/351 (46%), Gaps = 33/351 (9%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L ++L+ +Y C+ +A ++FD++ +RN+F W ++ Y G YE I+L+Y ++ G
Sbjct: 126 LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG 185
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD+F FP KACS L G+ +++ ++ +E + V +++DM+ KC + AR
Sbjct: 186 VRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIAR 245
Query: 129 QVFDKILERD-----------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
+ F++I +D S+ + +D+ G + +W
Sbjct: 246 RFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKL--SGVKPDQVTW--------- 294
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLR-----EKRVVSWNAMITGYAMHGHSTKALDLFEK 232
A++ YA+ G + A F ++ + VVSW A+I G +G+ +AL +F K
Sbjct: 295 --NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRK 352
Query: 233 MKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
M E V+P+ IT +SAC+ L GR ++ +D + +VD
Sbjct: 353 MVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKC- 411
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHG-HVKLAELALE-KLIELEP 340
R E M + D W A+L L G H + EL E K +EP
Sbjct: 412 RSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEP 462
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 171/350 (48%), Gaps = 12/350 (3%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + + ++ ++ C + A + F+ I +++F+WN+++ Y G ++ A++
Sbjct: 219 IGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKC 278
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK-WETDVFVGAALIDMYA 119
+ G+ PD T+ + + EE + ++ K ++ +V ALI
Sbjct: 279 ISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSE 338
Query: 120 KCSCVVNARQVFDKILER--DPSEATLVTVISASADIAALPQGRELHGFSWR-HRFELNV 176
+ A VF K++ P+ T+ + +SA +++ L GRE+HG+ + + ++
Sbjct: 339 QNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDL 398
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE 236
V +LVD YAKC V+VAR F +++ +VSWNAM+ GYA+ G +A++L +MK +
Sbjct: 399 LVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQ 458
Query: 237 -VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL-- 293
++PD IT+ G+++ ++ G FF+ M +DP+ + + G L
Sbjct: 459 GIEPDIITWNGLVTGFTQYGDGKAALEFFQRM-HSMGMDPNTTTISGALAACGQVRNLKL 517
Query: 294 -DEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHD 342
E +++ ++ GV AL++ ++ E+A EL D
Sbjct: 518 GKEIHGYVLRNHIELSTGVGSALIS---MYSGCDSLEVACSVFSELSTRD 564
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 177/383 (46%), Gaps = 72/383 (18%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
L+ C L + G ++H ++ N + F+G+ L+++Y + CV +AR++FDK+ ER+
Sbjct: 96 LQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNV 155
Query: 139 --------------------------------PSEATLVTVISASADIAALPQGRELHGF 166
P V A +++ G++++ +
Sbjct: 156 FSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDY 215
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
FE N VK +++DM+ KCG + +AR FE++ K V WN M++GY G KA
Sbjct: 216 MLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKA 275
Query: 227 LDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
L MK V+PD +T+ ++S ++ G F+E +F M P+V +T ++
Sbjct: 276 LKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIA 335
Query: 286 LLGHSGRLDEACDLIMQM---RVKPDPGVWGALLNSC----------KLHGH-VKLAELA 331
+G EA + +M VKP+ + +++C ++HG+ +K+ EL
Sbjct: 336 GSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELD 395
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHA 391
+ L+ GN ++ + YA+ + E VA+ + M IK++ SW +A
Sbjct: 396 SDLLV-------GNSLV--DYYAKCRSVE-VARRKFGM----IKQTDLVSW-------NA 434
Query: 392 FLSGDA---SHPNCDEIYAKLKW 411
L+G A SH E+ +++K+
Sbjct: 435 MLAGYALRGSHEEAIELLSEMKF 457
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 234/559 (41%), Positives = 320/559 (57%), Gaps = 72/559 (12%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
+H++F + + N+FL+N +I N ++ +IE+Y+ + + GL PD+FTFPF LKAC+
Sbjct: 61 SHRIFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACAR 120
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV--------------- 130
L + G ++H V++ E+D FV +L+ +Y KC + NA +V
Sbjct: 121 LLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAI 180
Query: 131 -----------------------FDKILERD----------------PSEA--------- 142
FD +LE+D P EA
Sbjct: 181 ISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLN 240
Query: 143 --------TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV 194
+V V+ A A + AL G R+ F N + TAL+DMYAKCG +
Sbjct: 241 EGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDS 300
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSR 253
A +F +R+K +V WNA I+G AM GH A LF +M K ++PD TFVG+L AC+
Sbjct: 301 AWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTH 360
Query: 254 GGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWG 313
GL DEGR +F SM R + + P ++HY CMVDLLG +G LDEA L+ M ++ + VWG
Sbjct: 361 AGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWG 420
Query: 314 ALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRG 373
ALL C+LH +L E L++LI LEP ++GNYV+LSNIY+ + WE AK+R +M +RG
Sbjct: 421 ALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERG 480
Query: 374 IKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVE 433
IKK SWIEV H FL GD SHP ++IYAKL L +K +GYVP T+ V D+E
Sbjct: 481 IKKVPGYSWIEVDGVVHEFLVGDTSHPLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIE 540
Query: 434 NDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVR 493
+EK + I CHSE+LAIAFGLI+T ++ + KNL++C DCH AIK IS+ T REI VR
Sbjct: 541 EEEKEHFIGCHSEKLAIAFGLISTAPNDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVR 600
Query: 494 DVNRYHHFKDGICSCGDYW 512
D NR+H F DG CSC DYW
Sbjct: 601 DNNRFHCFNDGSCSCKDYW 619
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
+PVL T L+ +Y+ C + +A ++F + ++++ +WN I A +G + A L+ ++
Sbjct: 281 NPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQME 340
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR 101
+ G+ PD TF L AC+ ++EGR+ + R
Sbjct: 341 KSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMER 376
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 5/131 (3%)
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVL 248
G + +F Q +E + +N MI G ++ ++++++ M+ E + PD TF +L
Sbjct: 56 GNTNYSHRIFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLL 115
Query: 249 SACSRGGLFDEG-RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
AC+R L D + +V + T +V L G G +D A + + K
Sbjct: 116 KACAR--LLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEK- 172
Query: 308 DPGVWGALLNS 318
+ W A+++
Sbjct: 173 NVAAWTAIISG 183
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/576 (38%), Positives = 336/576 (58%), Gaps = 65/576 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIR--------------- 46
GFG + + + LV +Y+ + A Q+FD + +RN+ ++N +I
Sbjct: 168 GFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLF 227
Query: 47 -------AYAW---------NGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIE 90
+ +W NG A++L+ + + G+ D +TF L AC L A++
Sbjct: 228 HGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALK 287
Query: 91 EGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER------------- 137
EG+ IH +IR+ + +VFVG+AL+DMY KC V A VF ++ +
Sbjct: 288 EGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYG 347
Query: 138 --------------------DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
+P + TL +VIS+ A++A+L +G + H + +
Sbjct: 348 QNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFIT 407
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE- 236
V AL+ +Y KCG ++ + LF+++ + VSW A+++GYA G + + +DLFE+M +
Sbjct: 408 VSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQG 467
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
++PD +TF+ VLSACSR GL + G+ +FESM++D+ I P HYTCM+DL G +GRL+EA
Sbjct: 468 LKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEA 527
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARA 356
+ I +M PD W LL+SC+L+G+ ++ + A E L+EL+P + Y++LS+IYA
Sbjct: 528 KNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAK 587
Query: 357 ANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRM 416
W VA+LR+ M ++G +K SWI+ K+K + F + D S P D+IYA+L+ L +M
Sbjct: 588 GKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKM 647
Query: 417 KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCH 476
E GYVP SV HDVE+ EK M+ HSE+LAIAFGL+ P G + + KNL++C DCH
Sbjct: 648 IEEGYVPDASSVLHDVEDSEKMKMLNHHSEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCH 707
Query: 477 IAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
A K+ISKI++REI VRD R+H FKDG CSCGD+W
Sbjct: 708 NATKYISKISQREILVRDAVRFHLFKDGTCSCGDFW 743
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 161/379 (42%), Gaps = 107/379 (28%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAY-------------------- 48
L L++ YS + A +FD++PQ N F WN ++ AY
Sbjct: 42 LYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSKSGDLSTMQEIFSIMPNRD 101
Query: 49 --AWN---------GPYEVAIELYYRLLEIGLVPDN-FTFPFALKACSALSAIEEGRRIH 96
+WN G A++ Y +++ G++ N TF L S+ ++ GR+IH
Sbjct: 102 GVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIH 161
Query: 97 EDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAA 156
+++ + VFVG++L+DMYAK V A QVFD++ ER
Sbjct: 162 GQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQER------------------- 202
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
NV + ++ + G+VK ++ LF ++E+ +SW MITG
Sbjct: 203 ------------------NVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITG 244
Query: 217 YAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGL--FDEGR------------ 261
+G +A+DLF M+ E + D TF VL+AC GGL EG+
Sbjct: 245 LIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTAC--GGLRALKEGKEIHTLIIRSGYN 302
Query: 262 --MFFESMVRDYH----------------IDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
+F S + D + + +V +T M+ G +G +EA + M
Sbjct: 303 HNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDM 362
Query: 304 R---VKPDPGVWGALLNSC 319
+ ++PD G++++SC
Sbjct: 363 QRNGIEPDDFTLGSVISSC 381
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 94/226 (41%), Gaps = 40/226 (17%)
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPS 140
K C + +++H +I++ + F+ LI+ Y+K + AR VFDK
Sbjct: 13 KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDK------- 65
Query: 141 EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
+PQ + FSW ++ Y+K G + + +F
Sbjct: 66 ----------------MPQP---NSFSW-----------NTMLSAYSKSGDLSTMQEIFS 95
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEK-MKDEV-QPDHITFVGVLSACSRGGLFD 258
+ + VSWN++I+GY +G +A+ + MKD V + ITF +L S G D
Sbjct: 96 IMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVD 155
Query: 259 EGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
GR +V+ + V + +VD+ G + A + +++
Sbjct: 156 LGRQIHGQIVK-FGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQ 200
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/545 (40%), Positives = 319/545 (58%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF +++ L+ +Y C+ + +++F+ + +L WN L+ + + ++
Sbjct: 182 GFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIF 241
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
Y++L G P+ FTF L++CS+L E G+++H +I+N + D FVG AL+DMYAK
Sbjct: 242 YQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKA 301
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
C+ +A FD+++ RD P+E TL + +
Sbjct: 302 RCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCL 361
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
S + +A L GR+LH + + ++ V +ALVD+Y KCG ++ A +F+ L + +V
Sbjct: 362 SGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIV 421
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWN +I+GY+ HG KAL+ F M E + PD TF+GVLSACS GL +EG+ F+SM
Sbjct: 422 SWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSM 481
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ Y I+PS++HY CMVD+LG +G+ +E I +M + P +W +L +CKLHG+V
Sbjct: 482 SKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDF 541
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E A +KL E+EP +Y++LSNI+A W+ V +R LM RGIKK CSW+EV
Sbjct: 542 GEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDG 601
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ H FLS D SHP EIYAKL L + GYVP TE V H+V N EK + HSER
Sbjct: 602 QVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSER 661
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA++F L++T + I KNL+IC+DCH +K IS IT +EI VRD+ R+HHFK G CS
Sbjct: 662 LALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRFHHFKRGTCS 721
Query: 508 CGDYW 512
C D W
Sbjct: 722 CQDRW 726
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 184/423 (43%), Gaps = 42/423 (9%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L LV +YS C +++A ++F +I ++ W+ +I G + A EL++ + G
Sbjct: 88 LGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKG 147
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P+ FT + + + + G+ IH + + +E+D V LI MY K CV +
Sbjct: 148 ARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGN 207
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+VF+ + D P+ T ++V+ + + +
Sbjct: 208 KVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLL 267
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
G+++H ++ + + V TALVDMYAK ++ A F++L + + SW +I+
Sbjct: 268 DPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIIS 327
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GYA + KA+ F +M+ E ++P+ T LS CS + GR V+ H
Sbjct: 328 GYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFG 387
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
+ + +VDL G G ++ A + I + + D W +++ HG + A A
Sbjct: 388 -DIFVGSALVDLYGKCGCMEHA-EAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRM 445
Query: 335 LIE--LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI---ACSWIEVKNKA 389
++ + P +A +LS EG + + GI SI AC +++ +A
Sbjct: 446 MLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYAC-MVDILGRA 504
Query: 390 HAF 392
F
Sbjct: 505 GKF 507
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 126/261 (48%), Gaps = 34/261 (13%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +LF +P++N WN L+ YA G + ++L+ ++ E FT LK C+
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
++ EG+ +H +R+ E D F+G +L+DMY+KC V +A +VF KI D
Sbjct: 64 TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123
Query: 139 --------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
P++ TL +++S + ++ L G+ +HG ++ F
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF 183
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
E + V L+ MY K V+ +FE + +VSWNA+++G+ + +F +
Sbjct: 184 ESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQ 243
Query: 233 MKDE-VQPDHITFVGVLSACS 252
M E +P+ TF+ VL +CS
Sbjct: 244 MLLEGFKPNMFTFISVLRSCS 264
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 7/209 (3%)
Query: 113 ALIDMYAKCSCVVNARQVFDKILERDP--SEATLVTVISASADIAALPQGRELHGFSWRH 170
AL++ YA+ ++F K+ E + S+ TL TV+ A+ +L +G+ LH + R
Sbjct: 21 ALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREGKVLHALALRS 80
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
E++ + +LVDMY+KCG V A +F ++R VV+W+AMITG GH +A +LF
Sbjct: 81 GCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELF 140
Query: 231 EKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLG 288
M+ + +P+ T ++S + G G+ + + + D V + M+ +
Sbjct: 141 HLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYM-- 198
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLN 317
R E + + + PD W ALL+
Sbjct: 199 -KSRCVEDGNKVFEAMTNPDLVSWNALLS 226
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 192 VKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSA 250
+++A LF + EK VSWNA++ GYA G K L LF KMK+ E + T VL
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 251 CSRGGLFDEGRMFFESMVRDY-HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
C+ G EG++ +R ID + +VD+ G + +A + ++R PD
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLG--CSLVDMYSKCGTVYDALKVFTKIR-NPDV 117
Query: 310 GVWGALLNSCKLHGH 324
W A++ GH
Sbjct: 118 VAWSAMITGLDQQGH 132
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/536 (41%), Positives = 323/536 (60%), Gaps = 34/536 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y+ + A QLFD +P +++ WN +I YA G + A+ L+ + + +
Sbjct: 199 TALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVP 258
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
P+ T L AC+ +A++ G + + +++ + ALIDMY+KC + AR++
Sbjct: 259 PNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTAREL 318
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
FD +LERD P+E T ++++ + A + A+
Sbjct: 319 FDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAI 378
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
G+ +H + ++ ++ + T+L+D+YAKCG + AR +F+ ++ K + SWNAMI G
Sbjct: 379 DLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGL 438
Query: 218 AMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
AMHG + KA +LF KM D ++P+ ITFVG+LSAC GL D G+ FF SMV+DY I P
Sbjct: 439 AMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPK 498
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
QHY CM+DLLG +G +EA L+ M VKPD +WG+LL +C+ HG V+L EL E+L
Sbjct: 499 SQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLF 558
Query: 337 ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGD 396
ELEP + G YV+LSNIYA A W+ VA++R + DRG+KK C+ IEV N H FL GD
Sbjct: 559 ELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGD 618
Query: 397 ASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLIN 456
HP ++IY L+ ++ ++K G+V T V +D++ + K + HSE+LAIAFGLI+
Sbjct: 619 KVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLIS 678
Query: 457 TPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
T GT + I KNL++C +CH A K ISKI REI RD NR+HHFKDG CSC DYW
Sbjct: 679 TKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 151/292 (51%), Gaps = 40/292 (13%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A LF+ I + NLF+WN +IR + + +A+ + R++ G+ P+++TFPF LK+C+
Sbjct: 82 AISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAK 141
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLV 145
L++ EG++IH V++ + +DVF+ +LI+MYA+ + NA+ VFD+ RD
Sbjct: 142 LASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRD------- 194
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
IS TAL+ YA G + AR LF+++ K
Sbjct: 195 -AISF-----------------------------TALIAGYALWGYMDRARQLFDEMPVK 224
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
VVSWNAMI GYA G S +AL LFE M K V P+ T V VLSAC++ D G
Sbjct: 225 DVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNS-M 283
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
S + D + +++ ++D+ G L A +L M ++ D W ++
Sbjct: 284 RSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDM-LERDVISWNVMI 334
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 148/322 (45%), Gaps = 38/322 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+ +YS C L A +LFD + +R++ WNV+I Y Y+ A+ L+ +L G
Sbjct: 298 LVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASG 357
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P TF L +C+ L AI+ G+ IH + +N + +LID+YAKC +V AR
Sbjct: 358 VEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAAR 417
Query: 129 QVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT-------- 180
QVFD + I + A A+ G +HG + + FEL K+ +
Sbjct: 418 QVFDGM------------KIKSLASWNAMICGLAMHGQADK-AFELFSKMSSDGIEPNEI 464
Query: 181 ALVDMYAKC---GLVKVARNLFEQLREKRVVS-----WNAMITGYAMHGHSTKALDLFEK 232
V + + C GLV + + F + + +S + MI G +A L +
Sbjct: 465 TFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQN 524
Query: 233 MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP-SVQHYTCMVDLLGHSG 291
M EV+PD + +L AC G + G + E R + ++P + Y + ++ +G
Sbjct: 525 M--EVKPDGAIWGSLLGACRDHGRVELGELVAE---RLFELEPDNPGAYVLLSNIYAGAG 579
Query: 292 RLDEACDLIMQMR---VKPDPG 310
+ D+ + ++ +K PG
Sbjct: 580 KWDDVARIRTRLNDRGMKKVPG 601
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 3/150 (2%)
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFV 245
++ G + A +LF + E + WN+MI G +M AL F +M V+P+ TF
Sbjct: 74 SRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFP 133
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
+L +C++ EG+ +++ + H T ++++ SG ++ A L+
Sbjct: 134 FLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIH-TSLINMYAQSGEMNNA-QLVFDQSN 191
Query: 306 KPDPGVWGALLNSCKLHGHVKLAELALEKL 335
D + AL+ L G++ A +++
Sbjct: 192 FRDAISFTALIAGYALWGYMDRARQLFDEM 221
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/540 (39%), Positives = 324/540 (60%), Gaps = 36/540 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T+L+ LY+ CDCL +A ++FD +PQ+N+ W +I AY+ G A+ L+ +L
Sbjct: 127 LRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSD 186
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P++FTF L +C E GR+IH I+ +E+ +FVG++L+DMYAK + +A
Sbjct: 187 TEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAH 246
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
VF + ERD + T +V++A + +A
Sbjct: 247 GVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLA 306
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL G+++H R V + +L+DMY+KCG V AR +F+ + E+ +SWNAM+
Sbjct: 307 ALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLV 366
Query: 216 GYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH- 272
GY+ HG + + L+LF+ M++E V+PD IT++ VLS CS G L D G F +MV
Sbjct: 367 GYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDG 426
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I+P + HY C+VDLLG +GR++EA D I +M P +WG+LL SC++H V++ +
Sbjct: 427 IEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVG 486
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
+KL+ELEP +AGNYVILSN+YA A WE + +R LM ++ + K SW+E+ H F
Sbjct: 487 QKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTF 546
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
+ D +HP +E+ K+K L + KE GYVP V +DV+ ++K ++ HSE+LA+AF
Sbjct: 547 HASDHTHPRREEVAKKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAF 606
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
GLI TP+GT + + KNL+IC DCH KF+S++ R + +RD NR+H+ G+CSCGDYW
Sbjct: 607 GLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 666
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 160/356 (44%), Gaps = 79/356 (22%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER-- 137
L C + AI EG+R+H +I+ + V++ LI +Y KC C+ +AR++FD++ ++
Sbjct: 97 LNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNV 156
Query: 138 -------------------------------DPSEATLVTVISASADIAALPQGRELHGF 166
+P+ T T++++ GR++H
Sbjct: 157 VSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSI 216
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ + +E ++ V ++L+DMYAK G + A +F L E+ VV+ A+I+GYA G +A
Sbjct: 217 AIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEA 276
Query: 227 LDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR---------------MFFESMVRD 270
L LF +++ E + + +T+ VL+A S + G+ + S++
Sbjct: 277 LKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDM 336
Query: 271 Y----------HIDPSVQHYTCM---VDLLGHS--GRLDEACDLIMQMR----VKPDPGV 311
Y I S+ TC+ L+G+S G E +L MR VKPD
Sbjct: 337 YSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSIT 396
Query: 312 WGALLNSCKLHGHVKLAELALEKLIEL-------EPHDAGNYVILSNIYARAANWE 360
+ A+L+ C H +L ++ LE + EP D G+Y + ++ RA E
Sbjct: 397 YLAVLSGCS---HGQLEDMGLEIFYNMVNGKDGIEP-DIGHYGCVVDLLGRAGRVE 448
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 92/165 (55%), Gaps = 4/165 (2%)
Query: 134 ILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVK 193
IL R+ T+++ A+ +G+ +H + + +V ++T L+ +Y KC +
Sbjct: 83 ILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLG 142
Query: 194 VARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACS 252
AR +F+++ +K VVSW AMI+ Y+ G + +AL+LF E ++ + +P+H TF +L++C
Sbjct: 143 DAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCY 202
Query: 253 RGGLFDEGRMFFE-SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
F+ GR ++ R+Y V + ++D+ SGR+ +A
Sbjct: 203 GSLGFETGRQIHSIAIKRNYESHMFVG--SSLLDMYAKSGRICDA 245
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL L+ +YS C + A ++FD +P+R WN ++ Y+ +G +EL+ + E
Sbjct: 328 VLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREE 387
Query: 68 GLV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNK--WETDVFVGAALIDMYAKCSCV 124
V PD+ T+ L CS + G I +++ K E D+ ++D+ + V
Sbjct: 388 NKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRV 447
Query: 125 VNARQVFDKILERDPSEA---TLVTVISASADIA-ALPQGRELHGFSWRHRFEL---NVK 177
A F K + P+ A +L+ +D+ + G++L EL N
Sbjct: 448 EEAFD-FIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKL--------LELEPENAG 498
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
L ++YA G + RN+ + ++EK V
Sbjct: 499 NYVILSNLYASAGKWEDMRNIRDLMQEKAVT 529
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/543 (40%), Positives = 319/543 (58%), Gaps = 33/543 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F + L+ +YS C L++A Q F+++ Q+ + W LI AY G Y+ AI L+Y
Sbjct: 685 FSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFY 744
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+ G+ PD ++ L AC+ +++++GR +H + +N + V AL+DMYAKC
Sbjct: 745 EMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCG 804
Query: 123 CVVNARQVFDKILERD----------------PSEA----------------TLVTVISA 150
+ A VF +I +D P+EA T+ ++ A
Sbjct: 805 SMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESRPDGITMACLLPA 864
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
+AAL GR +HG R+ + + V AL+DMY KCG + AR LF+ + EK +++W
Sbjct: 865 CGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITW 924
Query: 211 NAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
MI+G MHG +A+ F+KM+ ++PD ITF +L ACS GL +EG FF SM+
Sbjct: 925 TVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMIS 984
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+ +++P ++HY CMVDLL +G L +A +LI M +KPD +WGALL C++H V+LAE
Sbjct: 985 ECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAE 1044
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
E + ELEP +AG YV+L+NIYA A WE V KLR+ + RG+KKS CSWIEV+ K
Sbjct: 1045 KVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKF 1104
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLA 449
F+S D +HP I++ L L +MK G+ P + + EK +C HSE+LA
Sbjct: 1105 TTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYALINAGDMEKEVALCGHSEKLA 1164
Query: 450 IAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
+AFG++N P G + + KNL++CDDCH KF+SK T REI +RD NR+HHFKDG CSC
Sbjct: 1165 MAFGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTTRREIILRDSNRFHHFKDGFCSCR 1224
Query: 510 DYW 512
D+W
Sbjct: 1225 DFW 1227
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 175/368 (47%), Gaps = 35/368 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GFG + + L+ Y + +AH+LFD + R++ WN +I NG A+E
Sbjct: 582 LGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEF 641
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++L + + D T ++ AC+ + ++ GR +H ++ + +V L+DMY+K
Sbjct: 642 FVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSK 701
Query: 121 CSCVVNARQVFDKILER---------------------------------DPSEATLVTV 147
C + +A Q F+K+ ++ P ++ +V
Sbjct: 702 CGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSV 761
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A A +L +GR++H + ++ L + V AL+DMYAKCG ++ A +F Q+ K +
Sbjct: 762 LHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDI 821
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
VSWN MI GY+ + +AL LF +M+ E +PD IT +L AC + GR +
Sbjct: 822 VSWNTMIGGYSKNSLPNEALKLFAEMQKESRPDGITMACLLPACGSLAALEIGRGIHGCI 881
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+R+ + + ++D+ G L A L+ M + D W +++ C +HG
Sbjct: 882 LRNGY-SSELHVANALIDMYVKCGSLVHA-RLLFDMIPEKDLITWTVMISGCGMHGLGNE 939
Query: 328 AELALEKL 335
A +K+
Sbjct: 940 AIATFQKM 947
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 188/412 (45%), Gaps = 46/412 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRN-LFLWNVLIRAYAWNGPYEVAIEL 60
G VL KLV +Y +C L ++FD I N +FLWN+++ YA G Y +I L
Sbjct: 481 GIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYL 540
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ ++G+ +++TF LK + L + E +RIH V + + + V +LI Y K
Sbjct: 541 FKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFK 600
Query: 121 CSCVVNARQVFDKILERDPSE---------------------------------ATLVTV 147
V +A ++FD++ +RD ATLV
Sbjct: 601 SGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNS 660
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
++A A++ +L GR LHG + F V L+DMY+KCG + A FE++ +K V
Sbjct: 661 VAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTV 720
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSW ++I Y G A+ LF +M+ + V PD + VL AC+ G D+GR +
Sbjct: 721 VSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRD-VHN 779
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+R ++ + ++D+ G ++EA + Q+ VK D W ++ +
Sbjct: 780 YIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVK-DIVSWNTMIGG---YSKNS 835
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
L AL+ E++ + + ++ + L L I RGI I
Sbjct: 836 LPNEALKLFAEMQKESRPDGITMACLLP------ACGSLAALEIGRGIHGCI 881
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 109/262 (41%), Gaps = 36/262 (13%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP 139
L+ C+ ++EG+ +H + N + +GA L+ MY C + R++FD IL +
Sbjct: 458 LQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNK 517
Query: 140 ----------------------------------SEATLVTVISASADIAALPQGRELHG 165
+ T ++ A + + + + +HG
Sbjct: 518 VFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHG 577
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
++ F V +L+ Y K G V A LF++L ++ VVSWN+MI+G M+G S
Sbjct: 578 CVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHS 637
Query: 226 ALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMV 284
AL+ F +M V D T V ++AC+ G GR V+ V ++
Sbjct: 638 ALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKAC-FSREVMFNNTLL 696
Query: 285 DLLGHSGRLDEACDLIMQMRVK 306
D+ G L++A +M K
Sbjct: 697 DMYSKCGNLNDAIQAFEKMGQK 718
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ +A L+ +Y C L +A LFD IP+++L W V+I +G AI +
Sbjct: 885 GYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATF 944
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN-KWETDVFVGAALIDMYAK 120
++ G+ PD TF L ACS + EG +I E + A ++D+ A+
Sbjct: 945 QKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLAR 1004
Query: 121 CSCVVNARQVFDKI 134
+ A + + +
Sbjct: 1005 TGNLSKAYNLIETM 1018
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 17/237 (7%)
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ-LRE 204
+++ A+ L +G+ +H + + + LV MY CG ++ R +F+ L +
Sbjct: 456 SILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSD 515
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMF 263
+V WN M++ YA G +++ LF+KM K + + TF +L + G E +
Sbjct: 516 NKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRI 575
Query: 264 FESMVRDYHIDPSVQHYTCMVDLL----GHSGRLDEACDLIMQMRVKPDPGVWGALLNSC 319
+ + Y +V+ L SG +D A L ++ + D W ++++ C
Sbjct: 576 HGCVYK-----LGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDR-DVVSWNSMISGC 629
Query: 320 KLHGHVKLAELALEKLIELEPHDAG-NYVILSNIYARAANWEGVAKLRKLMIDRGIK 375
++G + ALE +++ G + L N A AN G L + + +G+K
Sbjct: 630 VMNG---FSHSALEFFVQMLILRVGVDLATLVNSVAACANV-GSLSLGRALHGQGVK 682
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/548 (40%), Positives = 329/548 (60%), Gaps = 41/548 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP-QRNLFLWNVLIRAYAWNGPYEVAIEL 60
GF F + T L+ YS C + +A +LF N+ W +I + N E A+ L
Sbjct: 329 GFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGL 388
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + G+ P+ FT+ L A +S E +H V++ +E VG AL+D Y K
Sbjct: 389 FSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVK 444
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
V A +VF I +D P+E T ++
Sbjct: 445 LGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSI 504
Query: 148 ISA-SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ +A A++ QG++ HGF+ + R + ++ V +AL+ MYAK G ++ A +F++ REK
Sbjct: 505 LNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKD 564
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+VSWN+MI+GYA HG + KALD+F++MK +V+ D +TF+GV +AC+ GL +EG +F+
Sbjct: 565 LVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFD 624
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
MVRD I P+ +H +CMVDL +G+L++A +I M +W +L +C++H
Sbjct: 625 IMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKT 684
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+L LA EK+I + P D+ YV+LSN+YA + +W+ AK+RKLM +R +KK SWIEV
Sbjct: 685 ELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEV 744
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
KNK +AFL+GD SHP D+IY KL+ L R+K+ GY P T V D++++ K ++ HS
Sbjct: 745 KNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHS 804
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF-KDG 504
ERLAIAFGLI TP G+ LLI KNL++C DCH+ IK I+KI EREI VRD NR+HHF DG
Sbjct: 805 ERLAIAFGLIATPKGSPLLIIKNLRVCGDCHVVIKLIAKIEEREIVVRDSNRFHHFSSDG 864
Query: 505 ICSCGDYW 512
+CSCGD+W
Sbjct: 865 VCSCGDFW 872
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 160/363 (44%), Gaps = 43/363 (11%)
Query: 3 FGF--HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
FGF + T LV Y + +FD + +RN+ W LI YA N E + L
Sbjct: 126 FGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTL 185
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+ + G P++FTF AL + G ++H V++N + + V +LI++Y K
Sbjct: 186 FMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLK 245
Query: 121 CSCVVNARQVFDKILERDP---------------------------------SEATLVTV 147
C V AR +FDK + SE++ ++
Sbjct: 246 CGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASI 305
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-EKR 206
I A++ L +LH ++ F + ++TAL+ Y+KC + A LF++
Sbjct: 306 IKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGN 365
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
VVSW AMI+G+ + +A+ LF +MK + V+P+ T+ +L+A + + +
Sbjct: 366 VVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALP---VISPSEVHAQ 422
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
+ +Y +V T ++D G++DEA + + K D W A+L G
Sbjct: 423 VVKTNYERSSTVG--TALLDAYVKLGKVDEAAKVFSGIDNK-DIVAWSAMLAGYAQAGET 479
Query: 326 KLA 328
+ A
Sbjct: 480 EAA 482
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 125/264 (47%), Gaps = 34/264 (12%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L+ AH LFD+ P R+ + L+ ++ +G + A L+ + +G+ D F LK
Sbjct: 47 LYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKV 106
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---- 138
+ L GR++H I+ + DV VG +L+D Y K S + R VFD++ ER+
Sbjct: 107 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTW 166
Query: 139 -----------------------------PSEATLVTVISASADIAALPQGRELHGFSWR 169
P+ T + A+ +G ++H +
Sbjct: 167 TTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 226
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
+ + + V +L+++Y KCG V+ AR LF++ K VV+WN+MI+GYA +G +AL +
Sbjct: 227 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 286
Query: 230 FEKMK-DEVQPDHITFVGVLSACS 252
F M+ + V+ +F ++ C+
Sbjct: 287 FYSMRLNHVRLSESSFASIIKLCA 310
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+V+ SA + GR+LH + F +V V T+LVD Y K K RN+F++++E+
Sbjct: 102 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKER 161
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF 264
VV+W +I+GYA + + + L LF +M+DE QP+ TF L + G+ G
Sbjct: 162 NVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 221
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG- 323
+V++ +D ++ +++L G + +A L + VK W ++++ +G
Sbjct: 222 TVVVKN-GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVV-TWNSMISGYAANGL 279
Query: 324 --------------HVKLAELALEKLIEL 338
HV+L+E + +I+L
Sbjct: 280 DLEALGMFYSMRLNHVRLSESSFASIIKL 308
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/540 (40%), Positives = 323/540 (59%), Gaps = 36/540 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T+L+ LY+ CDCL +A +FD +PQRN+ W +I AY+ G A+ L+ +L
Sbjct: 99 LRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSD 158
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P++FTF L +C E GR+IH I+ +E+ +FVG++L+DMYAK + +A
Sbjct: 159 TEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAH 218
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
VF + ERD + T +V++A + +A
Sbjct: 219 GVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLA 278
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL G+++H R V + +L+DMY+KCG V AR +F+ + E+ +SWNAM+
Sbjct: 279 ALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLV 338
Query: 216 GYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH- 272
GY+ HG + + L+LF+ M++E V+PD IT++ VLS CS G L D G F +MV
Sbjct: 339 GYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDG 398
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I+P + HY C+VDLLG +GR++EA D I +M P +WG+LL SC++H V++ +
Sbjct: 399 IEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVG 458
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
+KL+ELEP +AGNYVILSN+YA A WE + +R LM ++ + K SW+E+ H F
Sbjct: 459 QKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTF 518
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
+ D +HP +E+ K+K L + KE GYVP V +DV+ ++K ++ HSE+LA+AF
Sbjct: 519 HASDHTHPRREEVANKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAF 578
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
GLI TP+GT + + KNL+IC DCH KF+S++ R + +RD NR+H+ G+CSCGDYW
Sbjct: 579 GLIATPEGTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 638
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 159/356 (44%), Gaps = 79/356 (22%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER-- 137
L C + AI EG+R+H +I+ + V++ LI +Y KC C+ +AR +FD++ +R
Sbjct: 69 LNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNV 128
Query: 138 -------------------------------DPSEATLVTVISASADIAALPQGRELHGF 166
+P+ T T++++ GR++H
Sbjct: 129 VSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSI 188
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ + +E ++ V ++L+DMYAK G + A +F L E+ VV+ A+I+GYA G +A
Sbjct: 189 AIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEA 248
Query: 227 LDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR---------------MFFESMVRD 270
L LF +++ E + + +T+ VL+A S + G+ + S++
Sbjct: 249 LKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDM 308
Query: 271 Y----------HIDPSVQHYTCM---VDLLGHS--GRLDEACDLIMQMR----VKPDPGV 311
Y I S+ TC+ L+G+S G E +L MR VKPD
Sbjct: 309 YSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSIT 368
Query: 312 WGALLNSCKLHGHVKLAELALEKLIEL-------EPHDAGNYVILSNIYARAANWE 360
+ A+L+ C H +L ++ LE + EP D G+Y + ++ RA E
Sbjct: 369 YLAVLSGCS---HGQLEDMGLEIFYNMVNGKDGIEP-DIGHYGCVVDLLGRAGRVE 420
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 92/165 (55%), Gaps = 4/165 (2%)
Query: 134 ILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVK 193
IL R+ ++++ A+ +G+ +H + + +V ++T L+ +Y KC +
Sbjct: 55 ILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLG 114
Query: 194 VARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACS 252
AR +F+++ ++ VVSW AMI+ Y+ G + +AL+LF E ++ + +P+H TF +L++C
Sbjct: 115 DARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCY 174
Query: 253 RGGLFDEGRMFFE-SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
F+ GR ++ R+Y V + ++D+ SGR+ +A
Sbjct: 175 GSLGFETGRQIHSIAIKRNYESHMFVG--SSLLDMYAKSGRICDA 217
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL L+ +YS C + A ++FD +P+R WN ++ Y+ +G +EL+ + E
Sbjct: 300 VLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREE 359
Query: 68 GLV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNK--WETDVFVGAALIDMYAKCSCV 124
V PD+ T+ L CS + G I +++ K E D+ ++D+ + V
Sbjct: 360 NKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRV 419
Query: 125 VNARQVFDKILERDPSEA---TLVTVISASADIA-ALPQGRELHGFSWRHRFEL---NVK 177
A F K + P+ A +L+ +D+ + G++L EL N
Sbjct: 420 EEAFD-FIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKL--------LELEPENAG 470
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
L ++YA G + RN+ + ++EK V
Sbjct: 471 NYVILSNLYASAGKWEDMRNIRDLMQEKAVT 501
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/546 (40%), Positives = 321/546 (58%), Gaps = 37/546 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
G+ ++ L+ +Y CD + Q+FD +P +N W+ +I A + + L
Sbjct: 39 FGYQSQVFISNSLITMYGKCDKYELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSL 98
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++L G P L A + + + EE ++ V+ N + D V +A M+A+
Sbjct: 99 FRQMLSEGSRPSRGAI---LNAMACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFAR 155
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C V AR++FD I+ +D P TL+ V
Sbjct: 156 CGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGV 215
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNV-KVKTALVDMYAKCGLVKVARNLFEQLREKR 206
I A + +A+ +HG F + V+TAL+D+Y KCG + AR +F+ ++E+
Sbjct: 216 IRACSTLASFQLAHIVHGIITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERN 275
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
+++W+AMI+GY MHG +AL+LF++MK V+PDHITFV +LSACS GL EG F S
Sbjct: 276 IITWSAMISGYGMHGWGREALNLFDQMKASVKPDHITFVSILSACSHSGLVAEGWECFNS 335
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M RD+ + P +HY CMVD+LG +G+LDEACD I +M V+P+ VWGALL +C++H +V
Sbjct: 336 MARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVD 395
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
LAE+ L +L+PH+AG YVIL NIY + +R LM +RG+KK S IE+K
Sbjct: 396 LAEMVARALFDLDPHNAGRYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIK 455
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
NK +AF++GD SHP D IY++L+ L R+++ GY P V HDV+ + K +M+ HSE
Sbjct: 456 NKLYAFVAGDRSHPQTDLIYSELERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSE 515
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LAI FGL+N G+ + I KNL++C DCH A KFISK+T REI VRD +R+HHFK+G C
Sbjct: 516 KLAIVFGLLNLGPGSVIRIRKNLRVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGAC 575
Query: 507 SCGDYW 512
SC DYW
Sbjct: 576 SCRDYW 581
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 142/291 (48%), Gaps = 32/291 (10%)
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
+L +G+ PDNFTFPF +KACS L E G RIH+DV++ +++ VF+ +LI MY KC
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60
Query: 124 VVNARQVFDKILERDP------------------------------SEATLVTVISASAD 153
+RQVFD++ +++ S + +++A A
Sbjct: 61 YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAMAC 120
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+ + + +++ + + + V++A M+A+CG V+VAR LF+ + K +V+W
Sbjct: 121 VRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATT 180
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I Y +AL L ++M + + PD IT +GV+ ACS F + + +
Sbjct: 181 IEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFF 240
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+ + T ++DL G L A + M+ + + W A+++ +HG
Sbjct: 241 YNQLLAVETALIDLYVKCGSLTYARKVFDGMQER-NIITWSAMISGYGMHG 290
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/545 (42%), Positives = 316/545 (57%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ + T L+ LY CD +A ++FD IP +N+ W +I Y +G + AI +
Sbjct: 144 GYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAF 203
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+LLE+GL PD+F+ L AC+ L G I + + +VFV +L+DMY KC
Sbjct: 204 KKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKC 263
Query: 122 SCVVNARQVFDKILERD----------------PSEA-----------------TLVTVI 148
+ A +F + E+D P +A T+V V+
Sbjct: 264 GNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVL 323
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A + AL G R+ F N + TAL+DMY+KCG V A +F +++K V
Sbjct: 324 SACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRV 383
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
WNAM+ G +M+GH+ LF + K ++PD TF+G+L C+ GG +EGR FF +M
Sbjct: 384 VWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNM 443
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
R + + PS++HY CMVDLLG +G L+EA LI M +KP+ VWGALL CKLH L
Sbjct: 444 KRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHL 503
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE L+KLIELEP ++GNYV LSNIY+ WE K+R M ++ I+K ACSWIE+
Sbjct: 504 AEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDG 563
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
H FL GD SH ++IYAKL L +K G+VP TE V D+E +EK + + HSE+
Sbjct: 564 IVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEK 623
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+AFGLI +P + + KNL++C DCH AIK ISKIT+REI +RD NR+H F DG CS
Sbjct: 624 LAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCS 683
Query: 508 CGDYW 512
C DYW
Sbjct: 684 CRDYW 688
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 174/343 (50%), Gaps = 37/343 (10%)
Query: 29 LFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSA 88
+F ++ + N+FLWN +IR ++ AI LY + G +P+NFT PF LKAC+
Sbjct: 70 VFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLD 129
Query: 89 IEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---------- 138
+ G +IH +++ ++ DVFV +L+ +Y KC +A +VFD I +++
Sbjct: 130 VRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITG 189
Query: 139 -----------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELN 175
P +LV V++A A + G + + N
Sbjct: 190 YISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRN 249
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD 235
V V T+L+DMY KCG ++ A +F + EK +VSW+ MI GYA +G +ALDLF +M+
Sbjct: 250 VFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQS 309
Query: 236 E-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLD 294
E ++PD T VGVLSAC+ G D G M R+ + V T ++D+ G +
Sbjct: 310 ENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG-TALIDMYSKCGSVT 368
Query: 295 EACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+A ++ M+ K D VW A++ ++GH K A +L L+E
Sbjct: 369 QAWEIFTAMK-KKDRVVWNAMMVGLSMNGHAK-AVFSLFSLVE 409
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 7/152 (4%)
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVL 248
G ++ +F Q++E + WN MI G A+ L+ M+ P++ T VL
Sbjct: 62 GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121
Query: 249 SACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPD 308
AC+R G +V+ + D V T ++ L D+A + + PD
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGY-DHDVFVKTSLLSLYVKCDNFDDALKVFDDI---PD 177
Query: 309 PGV--WGALLNSCKLHGHVKLAELALEKLIEL 338
V W A++ GH + A A +KL+E+
Sbjct: 178 KNVVSWTAIITGYISSGHFREAIGAFKKLLEM 209
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/540 (39%), Positives = 315/540 (58%), Gaps = 36/540 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T+L+ Y CD L +A +FD +P+RN+ W +I AY+ G A+ L+ ++L G
Sbjct: 95 LRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSG 154
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P+ FTF L +C S GR+IH +I+ +E V+VG++L+DMYAK + AR
Sbjct: 155 TEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEAR 214
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+F + ERD + T +V++A + +A
Sbjct: 215 GIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLA 274
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL G+++H R V ++ +L+DMY+KCG + AR +F+ L E+ V+SWNAM+
Sbjct: 275 ALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLV 334
Query: 216 GYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGR-MFFESMVRDYH 272
GY+ HG + L+LF M DE V+PD +T + VLS CS GGL D+G +F++
Sbjct: 335 GYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKIS 394
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
+ P +HY C+VD+LG +GR++ A + + +M +P +WG LL +C +H ++ + E
Sbjct: 395 VQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVG 454
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
+L+++EP +AGNYVILSN+YA A WE V LR LM+ + + K SWIE+ H F
Sbjct: 455 HQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTF 514
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
+ D SHP +E+ AK++ L R KEAGYVP V HDV+ ++K ++ HSE+LA+ F
Sbjct: 515 HASDCSHPRREEVSAKVQELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLALTF 574
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
GLI TP+ + + KNL+IC DCH K+ SKI RE+++RD NR+H G CSCGDYW
Sbjct: 575 GLIATPESVPIRVIKNLRICVDCHNFAKYTSKIYGREVSLRDKNRFHRIVGGKCSCGDYW 634
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 134/290 (46%), Gaps = 36/290 (12%)
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
GL + + L C AI EG+R+H +I+ + V++ LI Y KC + +A
Sbjct: 53 GLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDA 112
Query: 128 RQVFDKILER---------------------------------DPSEATLVTVISASADI 154
R VFD + ER +P+E T TV+++
Sbjct: 113 RHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGS 172
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
+ GR++H + +E +V V ++L+DMYAK G + AR +F+ L E+ VVS A+I
Sbjct: 173 SGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAII 232
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+GYA G +AL+LF +++ E +Q +++T+ VL+A S D G+ ++R +
Sbjct: 233 SGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRS-EV 291
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
V ++D+ G L A + + + W A+L HG
Sbjct: 292 PSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVIS-WNAMLVGYSKHG 340
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 107/209 (51%), Gaps = 7/209 (3%)
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
TV++ A+ +G+ +H + + V ++T L+ Y KC ++ AR++F+ + E+
Sbjct: 63 TVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPER 122
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
VVSW AMI+ Y+ G++++AL LF +M + +P+ TF VL++C F GR
Sbjct: 123 NVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIH 182
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+++ + + V + ++D+ G++ EA I Q + D A+++ +
Sbjct: 183 SHIIK-LNYEAHVYVGSSLLDMYAKDGKIHEARG-IFQCLPERDVVSCTAIISG---YAQ 237
Query: 325 VKLAELALEKLIELEPHD-AGNYVILSNI 352
+ L E ALE L+ NYV +++
Sbjct: 238 LGLDEEALELFRRLQREGMQSNYVTYTSV 266
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/545 (42%), Positives = 315/545 (57%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ + T L+ LY CD +A ++FD IP +N+ W +I Y +G + AI +
Sbjct: 144 GYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAF 203
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+LLE+GL PD+F+ L AC+ L G I + + +VFV +L+DMY KC
Sbjct: 204 KKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKC 263
Query: 122 SCVVNARQVFDKILERD----------------PSEA-----------------TLVTVI 148
+ A +F + E+D P +A T+V V+
Sbjct: 264 GNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVL 323
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A + AL G R+ F N + TAL+DMY+KCG V A +F ++ K V
Sbjct: 324 SACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRV 383
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
WNAM+ G +M+GH+ LF + K ++PD TF+G+L C+ GG +EGR FF +M
Sbjct: 384 VWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNM 443
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
R + + PS++HY CMVDLLG +G L+EA LI M +KP+ VWGALL CKLH L
Sbjct: 444 KRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHL 503
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE L+KLIELEP ++GNYV LSNIY+ WE K+R M ++ I+K ACSWIE+
Sbjct: 504 AEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDG 563
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
H FL GD SH ++IYAKL L +K G+VP TE V D+E +EK + + HSE+
Sbjct: 564 IVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEK 623
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+AFGLI +P + + KNL++C DCH AIK ISKIT+REI +RD NR+H F DG CS
Sbjct: 624 LAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSCS 683
Query: 508 CGDYW 512
C DYW
Sbjct: 684 CRDYW 688
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 174/343 (50%), Gaps = 37/343 (10%)
Query: 29 LFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSA 88
+F ++ + N+FLWN +IR ++ AI LY + G +P+NFT PF LKAC+
Sbjct: 70 VFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLD 129
Query: 89 IEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---------- 138
+ G +IH +++ ++ DVFV +L+ +Y KC +A +VFD I +++
Sbjct: 130 VRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITG 189
Query: 139 -----------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELN 175
P +LV V++A A + G + + N
Sbjct: 190 YISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRN 249
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD 235
V V T+L+DMY KCG ++ A +F + EK +VSW+ MI GYA +G +ALDLF +M+
Sbjct: 250 VFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQS 309
Query: 236 E-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLD 294
E ++PD T VGVLSAC+ G D G M R+ + V T ++D+ G +
Sbjct: 310 ENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG-TALIDMYSKCGSVT 368
Query: 295 EACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+A ++ M+ K D VW A++ ++GH K A +L L+E
Sbjct: 369 QAWEIFTAMKRK-DRVVWNAMMVGLSMNGHAK-AVFSLFSLVE 409
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 7/152 (4%)
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVL 248
G ++ +F Q++E + WN MI G A+ L+ M+ P++ T VL
Sbjct: 62 GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121
Query: 249 SACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPD 308
AC+R G +V+ + D V T ++ L D+A + + PD
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGY-DHDVFVKTSLLSLYVKCDNFDDALKVFDDI---PD 177
Query: 309 PGV--WGALLNSCKLHGHVKLAELALEKLIEL 338
V W A++ GH + A A +KL+E+
Sbjct: 178 KNVVSWTAIITGYISSGHFREAIGAFKKLLEM 209
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/539 (41%), Positives = 315/539 (58%), Gaps = 34/539 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+ L+ C + +A LF + R+ W ++ NG A++++ R+
Sbjct: 213 VMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAE 272
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ D +TF L AC AL+A+EEG++IH + R +E +VFVG+AL+DMY+KC + A
Sbjct: 273 GVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLA 332
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
VF ++ R+ P + TL +VIS+ A++
Sbjct: 333 EAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANL 392
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
A+L +G + H + + V ALV +Y KCG ++ A LF+++ VSW A++
Sbjct: 393 ASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALV 452
Query: 215 TGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
TGYA G + + +DLFEKM + ++PD +TF+GVLSACSR GL ++G +F+SM +D+ I
Sbjct: 453 TGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGI 512
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P HYTCM+DL SGR EA + I QM PD W LL+SC+L G++++ + A E
Sbjct: 513 VPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAE 572
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
L+E +P + +YV+L +++A W VA LR+ M DR +KK CSWI+ KNK H F
Sbjct: 573 NLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFS 632
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
+ D SHP IY KL+WL +M E GY P SV HDV + +K +MI HSE+LAIAFG
Sbjct: 633 ADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFG 692
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LI P + I KNL++C DCH A KFISKIT R+I VRD R+H F DG CSCGD+W
Sbjct: 693 LIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 164/366 (44%), Gaps = 54/366 (14%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-EIGLVPDNFTFPFALKAC 83
+ +LF +P+R+ +N LI ++ G +++LY LL E + P T +
Sbjct: 97 DMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVA 156
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEAT 143
SALS G +H V+R + FVG+ L+DMYAK + +AR+VF ++ EA
Sbjct: 157 SALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEM------EAK 210
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
V + + L+ +C +++ A+ LF+ +
Sbjct: 211 TVVMYN-------------------------------TLITGLLRCKMIEDAKGLFQLMV 239
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRM 262
++ ++W M+TG +G +ALD+F +M+ E V D TF +L+AC +EG+
Sbjct: 240 DRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQ 299
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLG--HSGRLDEACDLIMQMRVKPDPGVWGALL---- 316
+ R ++ D +V + +VD+ S RL EA M R + W A++
Sbjct: 300 IHAYITRTWYED-NVFVGSALVDMYSKCRSIRLAEAVFRRMTCR---NIISWTAMIVGYG 355
Query: 317 -NSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIK 375
N+C +E+ ++ ++P D ++S+ A A+ E A+ L + G+
Sbjct: 356 QNACSEEAVRAFSEMQMDG---IKPDDFTLGSVISSC-ANLASLEEGAQFHCLALVSGLM 411
Query: 376 KSIACS 381
+ I S
Sbjct: 412 RYITVS 417
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/538 (39%), Positives = 322/538 (59%), Gaps = 35/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L LV++Y+ C + A ++F IP+R++ W LI + G Y + ++ ++L G
Sbjct: 228 LWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEG-YGSGLRIFNQMLAEG 286
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P+ +TF L++CS+LS ++ G+++H +++N + + FVG AL+DMYAK + +A
Sbjct: 287 FNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAE 346
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+F+++++RD P+E TL + +S + IA
Sbjct: 347 TIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIA 406
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L GR+LH + + ++ V +ALVDMYAKCG V+ A +F+ L + VSWN +I
Sbjct: 407 TLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIIC 466
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GY+ HG KAL FE M DE PD +TF+GVLSACS GL +EG+ F S+ + Y I
Sbjct: 467 GYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGIT 526
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P+++HY CMVD+LG +G+ E I +M++ + +W +L +CK+HG+++ E A K
Sbjct: 527 PTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMK 586
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L ELEP NY++LSN++A W+ V +R LM RG+KK CSW+EV + H FLS
Sbjct: 587 LFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLS 646
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
D SHP EI+ KL+ L ++ GY P T+ V H+V + EK ++ HSERLA+AF L
Sbjct: 647 HDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFAL 706
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++T + I KNL+IC DCH +K IS+IT +E+ VRD+N +HHFK+G CSC ++W
Sbjct: 707 LSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 764
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 164/369 (44%), Gaps = 35/369 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF +++ V +Y + N Q F + NL N L+ + + +
Sbjct: 120 GFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRIL 179
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+LL G P+ +TF LK C++ + EG+ IH VI++ D + +L+++YAKC
Sbjct: 180 IQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKC 239
Query: 122 SCVVNARQVFDKILERD--------------------------------PSEATLVTVIS 149
A +VF +I ERD P+ T ++++
Sbjct: 240 GSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGLRIFNQMLAEGFNPNMYTFISILR 299
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
+ + ++ + G+++H ++ + N V TALVDMYAK ++ A +F +L ++ + +
Sbjct: 300 SCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFA 359
Query: 210 WNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
W ++ GYA G KA+ F +M+ E V+P+ T LS CSR D GR SM
Sbjct: 360 WTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQ-LHSMA 418
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ + +VD+ G +++A +++ V D W ++ HG A
Sbjct: 419 IKAGQSGDMFVASALVDMYAKCGCVEDA-EVVFDGLVSRDTVSWNTIICGYSQHGQGGKA 477
Query: 329 ELALEKLIE 337
A E +++
Sbjct: 478 LKAFEAMLD 486
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 176/394 (44%), Gaps = 45/394 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L + LV++Y C+ L A Q+ + +P +++ WN + + P + A++L+Y +
Sbjct: 26 LWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTR 85
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ + F F + A ++L G IH V + +E+D+ + A + MY K V N
Sbjct: 86 IRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGW 145
Query: 129 QVFDKILER---------------------------------DPSEATLVTVISASADIA 155
Q F ++ +P+ T ++++ A
Sbjct: 146 QFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKG 205
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L +G+ +HG + + + +LV++YAKCG A +F ++ E+ VVSW A+IT
Sbjct: 206 DLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALIT 265
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+ G+ + L +F +M E P+ TF+ +L +CS D G+ +V++ +D
Sbjct: 266 GFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKN-SLD 323
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
+ T +VD+ + L++A + I +K D W ++ G E A++
Sbjct: 324 GNDFVGTALVDMYAKNRFLEDA-ETIFNRLIKRDLFAWTVIVAGYAQDGQ---GEKAVKC 379
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKL 368
I+++ + N + A++ G +++ L
Sbjct: 380 FIQMQREG-----VKPNEFTLASSLSGCSRIATL 408
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/538 (40%), Positives = 324/538 (60%), Gaps = 34/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A KL+++Y L +A +LFD + +R+ + W+V++ YA G + ++ LL G
Sbjct: 87 VANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSG 146
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
D+++ P ++AC L ++ GR IH ++ + FV A L+DMYA+C V +A
Sbjct: 147 APLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAH 206
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
Q+F K+ +RD P + LVTV+ A A +
Sbjct: 207 QIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLG 266
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
A+ + + +H + + L+V + TA++DMYAKCG V+ AR +F++++ + V++W+AMI
Sbjct: 267 AMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIA 326
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
Y HG KAL+LF M + + P+ ITFV +L ACS GL +EG+ FF SM +Y +
Sbjct: 327 AYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVT 386
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P V+HYTCMVDLLG +GRLDEA ++I M V+ D +WGALL +C++H H+ LAE
Sbjct: 387 PDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARS 446
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L++L+ G+YV+LSNIYA A WE +AK R LM G++K +WIEV K + F
Sbjct: 447 LLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGV 506
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD +HP +EIY LK L +++ AGY P T V +DV+ + K ++ HSE+LAIAFGL
Sbjct: 507 GDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLYDVDEEVKQGLLYSHSEKLAIAFGL 566
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ P G + ITKNL++C DCH KF+S I ++ I VRD R+HHFK+G+CSC DYW
Sbjct: 567 LVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTIIVRDAKRFHHFKEGVCSCRDYW 624
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 152/319 (47%), Gaps = 27/319 (8%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
H V AT LV +Y+ C + +AHQ+F ++ +R+L W V+I A A +G ++ + R+
Sbjct: 186 HFVCAT-LVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMR 244
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G+VPD + AC+ L A+ + + IH + + DV +G A+IDMYAKC V
Sbjct: 245 NQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVE 304
Query: 126 NARQVFDKILERDPSEATLVTVISASADIAAL---PQGR---ELHGFSWRHRFELNVKVK 179
+AR +FD++ R+ VI+ SA IAA QG EL R N
Sbjct: 305 SARWIFDRMQVRN--------VITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITF 356
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVS-----WNAMITGYAMHGHSTKALDLFEKMK 234
+L+ + GL++ + F + ++ V+ + M+ G +AL++ E M
Sbjct: 357 VSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGM- 415
Query: 235 DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLD 294
V+ D + + +L AC D S+++ P HY + ++ ++G+ +
Sbjct: 416 -PVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPG--HYVLLSNIYANAGKWE 472
Query: 295 EAC---DLIMQMRVKPDPG 310
+ DL+ + ++ PG
Sbjct: 473 DMAKTRDLMTKGGLRKIPG 491
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ +L T ++ +Y+ C + +A +FDR+ RN+ W+ +I AY ++G E A+EL+
Sbjct: 282 GYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELF 341
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRI 95
+L G++P+ TF L ACS IEEG+R
Sbjct: 342 PMMLRSGILPNRITFVSLLYACSHAGLIEEGQRF 375
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/547 (39%), Positives = 333/547 (60%), Gaps = 40/547 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQ-RNLFLWNVLIRAYAWNGPYEVAIEL 60
GF ++ T L+ S C + +A LF + + +N+ W +I NG + A+ L
Sbjct: 325 GFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNL 384
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ G+ P++FT+ L + E +H +VI+ +E VG AL+D Y K
Sbjct: 385 FSQMRREGVKPNHFTYSAILTVHYPVFVSE----MHAEVIKTNYERSSSVGTALLDAYVK 440
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
++A +VF+ I +D P+E T +V
Sbjct: 441 LGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSV 500
Query: 148 ISASAD-IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
I+A A AA QG++ H ++ + R + V +ALV MYAK G + A +F++ +E+
Sbjct: 501 INACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERD 560
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+VSWN+MI+GY+ HG + KAL++F++M K + D +TF+GV++AC+ GL ++G+ +F
Sbjct: 561 LVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFN 620
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
SM+ D+HI+P+++HY+CM+DL +G L++A +I +M P VW LL + ++H +V
Sbjct: 621 SMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNV 680
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+L ELA EKLI L+P D+ YV+LSN+YA A NW+ +RKLM R +KK SWIEV
Sbjct: 681 ELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEV 740
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
KNK ++FL+GD +HP ++IY+KL L R+K+AGY P T++VFHD+E+++K ++ HS
Sbjct: 741 KNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKNVFHDIEDEQKETILSHHS 800
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
ERLAIAFGLI TP + I KNL++C DCH K +S + +R I VRD NR+HHFKDG+
Sbjct: 801 ERLAIAFGLIATPPEIPIQIVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGL 860
Query: 506 CSCGDYW 512
CSCGDYW
Sbjct: 861 CSCGDYW 867
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 159/337 (47%), Gaps = 39/337 (11%)
Query: 24 HNAHQLFDRIPQRNLFL--WNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALK 81
H AH LFD+IP R L N L+ +Y+ + + A+ L+ LL L PD T
Sbjct: 42 HIAHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFN 101
Query: 82 ACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD--- 138
C+ + GR++H ++ V VG +L+DMY K V + R+VFD++ ER+
Sbjct: 102 ICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVS 161
Query: 139 ------------------------------PSEATLVTVISASADIAALPQGRELHGFSW 168
P+ T+ TVI+A + + G ++H
Sbjct: 162 WTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVV 221
Query: 169 RHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALD 228
+H FE + V +L+ +Y++ G+++ AR++F+++ + V+WN+MI GY +G + +
Sbjct: 222 KHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFE 281
Query: 229 LFEKMK-DEVQPDHITFVGVLSAC-SRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDL 286
+F KM+ V+P H+TF V+ +C S L M +++ + D V T ++
Sbjct: 282 IFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIV--ITALMVA 339
Query: 287 LGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
L +D+A L M + W A+++ C +G
Sbjct: 340 LSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNG 376
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 176/379 (46%), Gaps = 45/379 (11%)
Query: 3 FGF--HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
FG H + T LV +Y + +++ ++FD + +RN+ W L+ Y+WNG Y EL
Sbjct: 122 FGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWEL 181
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ G++P+ +T + A + G ++H V+++ +E + V +LI +Y++
Sbjct: 182 FCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSR 241
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ +AR VFDK+ RD P+ T +V
Sbjct: 242 LGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASV 301
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE-KR 206
I + A + L + + + + F + V TAL+ +KC + A +LF + E K
Sbjct: 302 IKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKN 361
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
VVSW AMI+G +G + +A++LF +M+ E V+P+H T+ +L+ +F M E
Sbjct: 362 VVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTV--HYPVF-VSEMHAE 418
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
+ +Y SV T ++D G +A + + K D W A+L G
Sbjct: 419 VIKTNYERSSSVG--TALLDAYVKLGNTIDAVKVFEIIEAK-DLMAWSAMLAGYAQTGET 475
Query: 326 KLAELALEKLIE--LEPHD 342
+ A +LI+ ++P++
Sbjct: 476 EEAAKLFHQLIKEGIKPNE 494
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/538 (42%), Positives = 320/538 (59%), Gaps = 34/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A LV +Y+ L +A ++FD IPQR+L LWN LI + + A+ L+ R+ + G
Sbjct: 340 IAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEG 399
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ T LK+ ++L AI + R++H + + +D V LID Y KC C+ A
Sbjct: 400 FDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAY 459
Query: 129 QVFDK-------------------------------ILER--DPSEATLVTVISASADIA 155
+VF+K +L + DP L ++++A A ++
Sbjct: 460 RVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLS 519
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
A QG+++H + +F +V ALV YAKCG ++ A F L EK VVSW+AMI
Sbjct: 520 AYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIG 579
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G A HGH +ALD+F +M DE + P+HIT VL AC+ GL DE + +F SM + I+
Sbjct: 580 GLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIE 639
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
+ +HY CM+DLLG +G+LD+A +L+ M + + VWGALL + ++H +L LA EK
Sbjct: 640 RTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEK 699
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L LEP +G +V+L+N YA A W+ VAK+RKLM D +KK A SW+E+K+K H F+
Sbjct: 700 LFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIV 759
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD SHP +IYAKL L M +AGYVP E HDV+ +EK ++ HSERLA+AF L
Sbjct: 760 GDKSHPRARDIYAKLDELGDLMTKAGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFAL 819
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I+TP G + + KNL+IC DCH A KFIS I REI +RD+NR+HHF+DG CSC DYW
Sbjct: 820 ISTPAGAPIRVKKNLRICRDCHAAFKFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 167/386 (43%), Gaps = 68/386 (17%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP-QRNLFLWNVLIRAYAWNGPYEVAIEL 60
G G +A LV +Y + A +FD +RN WN L+ AY N A+++
Sbjct: 130 GLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKV 189
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ G+ P+ F F + AC+ +E GR++H VIR ++ DVF AL+DMY+K
Sbjct: 190 FGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSK 249
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ A VF K+ E D P+ TL ++
Sbjct: 250 LGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSI 309
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A A A GR++HGF + + + + LVDMYAK GL+ A+ +F+ + ++ +
Sbjct: 310 LKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDL 369
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSR------------- 253
V WNA+I+G + +AL LF +M+ E + T VL + +
Sbjct: 370 VLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHAL 429
Query: 254 -------------GGLFDE----GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
GL D + + V + H + +T M+ L ++A
Sbjct: 430 AEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDA 489
Query: 297 CDLIMQMRVK---PDPGVWGALLNSC 319
L M+M K PDP V +LLN+C
Sbjct: 490 IKLFMEMLRKGLDPDPFVLSSLLNAC 515
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 174/400 (43%), Gaps = 42/400 (10%)
Query: 4 GFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
G V L+ YS C +A ++FD IP W+ L+ AY+ N A+ +
Sbjct: 34 GLFAVFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRS 93
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
+ + + F P LK C+ + G ++H + D+FV AL+ MY
Sbjct: 94 MRSCSVRCNEFVLPVVLK-CAPDAGF--GTQLHALAMATGLGGDIFVANALVAMYGGFGF 150
Query: 124 VVNARQVFDKI-LERD---------------------------------PSEATLVTVIS 149
V AR VFD+ ER+ P+E V++
Sbjct: 151 VDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVN 210
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A L GR++H R ++ +V ALVDMY+K G +++A +F ++ E VVS
Sbjct: 211 ACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVS 270
Query: 210 WNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WNA I+G +HGH AL+L +MK + P+ T +L AC+ G F+ GR MV
Sbjct: 271 WNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMV 330
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ + D +VD+ G LD+A + + D +W AL++ C HG
Sbjct: 331 K-ANADSDNYIAFGLVDMYAKHGLLDDA-KKVFDWIPQRDLVLWNALISGCS-HGAQHAE 387
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKL 368
L+L + E D N L+ + A+ E ++ R++
Sbjct: 388 ALSLFCRMRKEGFDV-NRTTLAAVLKSTASLEAISDTRQV 426
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 136/305 (44%), Gaps = 46/305 (15%)
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEAT 143
+A ++ +G IH ++++ VF L+ Y+KC +AR+VFD+I DP +
Sbjct: 15 AATQSLLQGAHIHAHLLKSGLFA-VFRNH-LLSFYSKCRLPGSARRVFDEI--PDPCHVS 70
Query: 144 LVTVISASADIAALPQ---------------------------------GRELHGFSWRH 170
++++A ++ A+P+ G +LH +
Sbjct: 71 WSSLVTAYSN-NAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGFGTQLHALAMAT 129
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-EKRVVSWNAMITGYAMHGHSTKALDL 229
++ V ALV MY G V AR +F++ E+ VSWN +++ Y + + A+ +
Sbjct: 130 GLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKV 189
Query: 230 FEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
F +M VQP+ F V++AC+ + GR ++R + D V +VD+
Sbjct: 190 FGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGY-DKDVFTANALVDMYS 248
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHD-AGNYV 347
G + A ++ + D W A ++ C LHGH + ALE L++++ N
Sbjct: 249 KLGDIRMAA-VVFGKVPETDVVSWNAFISGCVLHGH---DQHALELLLQMKSSGLVPNVF 304
Query: 348 ILSNI 352
LS+I
Sbjct: 305 TLSSI 309
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T+ +++ A +L QG +H + L + L+ Y+KC L AR +F+++
Sbjct: 6 TIGPLLTRYAATQSLLQGAHIHAHLLKS--GLFAVFRNHLLSFYSKCRLPGSARRVFDEI 63
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
+ VSW++++T Y+ + AL F M+
Sbjct: 64 PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMR 95
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/545 (40%), Positives = 333/545 (61%), Gaps = 40/545 (7%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V T L+ Y++ +A ++FD I +R++ WN +I Y NG YE A+EL+ ++
Sbjct: 131 VSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRT 190
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR----NKWETDVFVGAALIDMYAKCSC 123
+ PD T + AC+ +IE GR++H V + + + + + ALID+Y+KC
Sbjct: 191 NVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGD 250
Query: 124 VVNARQVFDKILERD---------------------------------PSEATLVTVISA 150
V A +F+ + +D P++ TL++V+ A
Sbjct: 251 VETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPA 310
Query: 151 SADIAALPQGRELHGFSWRHRFELN--VKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A + A+ GR +H + + + ++T+L+DMYAKCG ++ A +F + + +
Sbjct: 311 CAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLS 370
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNAMI G+AMHG + A DLF +M+ + V+PD ITFVG+LSACS GL D GR F+SM
Sbjct: 371 SWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSM 430
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+DY++ P ++HY CM+DLLGHSG EA ++I M ++PD +W +LL +CK HG+++L
Sbjct: 431 TQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLEL 490
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE +KLI++EP ++G+YV+LSNIYA A WE VA++R ++ +G+KK CS IEV +
Sbjct: 491 AESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDS 550
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
H F+ GD HP EIY L+ ++ +++EAG+ P T V ++E + K + HSE+
Sbjct: 551 VVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSEK 610
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGLI+T GT+L I KNL++C +CH A K ISKI +REI RD R+HHF+DG+CS
Sbjct: 611 LAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCS 670
Query: 508 CGDYW 512
C DYW
Sbjct: 671 CCDYW 675
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 192/423 (45%), Gaps = 108/423 (25%)
Query: 21 DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
D L A +F+ I + NL +WN ++R +A + A+E+Y R++ +G +P++++FPF L
Sbjct: 12 DGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLL 71
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK-------------------- 120
K+C+ A EEGR+IH V++ D +V +LI MYA+
Sbjct: 72 KSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVV 131
Query: 121 -CSCVV----------NARQVFDKILERD------------------------------- 138
C+ ++ +AR+VFD+I ERD
Sbjct: 132 SCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTN 191
Query: 139 --PSEATLVTVISASADIAALPQGRELHGFSW------RHRFELNVKVKTALVDMYAKCG 190
P E TLV+V+SA A ++ GR++H SW H F ++K+ AL+D+Y+KCG
Sbjct: 192 VRPDEGTLVSVVSACAQSGSIELGRQVH--SWVDDDDDDHGFSSSLKIVNALIDLYSKCG 249
Query: 191 LVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLS 249
V+ A LFE L K VVSWN +I GY +AL LF++M + P+ +T + VL
Sbjct: 250 DVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLP 309
Query: 250 ACSRGGLFDEGRMFF------------ESMVRDYHID--------------------PSV 277
AC+ G D GR E+ +R ID S+
Sbjct: 310 ACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSL 369
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQM---RVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
+ M+ GR + A DL +M RV+PD + LL++C G + L +
Sbjct: 370 SSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKS 429
Query: 335 LIE 337
+ +
Sbjct: 430 MTQ 432
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/538 (41%), Positives = 318/538 (59%), Gaps = 34/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T L+ +Y C ++ A ++FD + ++ W V+I AYA +G + A L ++ + G
Sbjct: 166 VGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEG 225
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P+ T+ L AC++ A++ +R+H + E DV VG AL+ MYAK + +AR
Sbjct: 226 FKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDAR 285
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
VFD++ RD P +++++A A
Sbjct: 286 VVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAG 345
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL +++H + E++V+V TALV MY+K G + AR +F++++ + VVSWNAMI+
Sbjct: 346 ALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMIS 405
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G A HG AL++F +M V+PD +TFV VLSACS GL DEGR + +M + Y I+
Sbjct: 406 GLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIE 465
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P V H CMVDLLG +GRL EA I M V PD WGALL SC+ +G+V+L EL ++
Sbjct: 466 PDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKE 525
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
++L+P +A YV+LSNIYA A W+ V+ +R +M +RGI+K SWIEV NK H FL
Sbjct: 526 RLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLV 585
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
D+SHP C EI + ++K GY+P T V + +K IC HSE+LAI +GL
Sbjct: 586 ADSSHPECKEINESKDKVIEKIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGL 645
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++TP G + + KNL++C DCH A K ISK+ REI VRD NR+HHFKDG+CSCGDYW
Sbjct: 646 MHTPPGNPIRVFKNLRVCTDCHGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 185/365 (50%), Gaps = 39/365 (10%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
L+H+Y C L A +FD + +++ WN +I Y + E A+ L+ + G+
Sbjct: 67 NNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQ 126
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
P+ T+ LKAC++LSA++ G+ +H + E+DV VG AL+ MY KC + AR++
Sbjct: 127 PNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRI 186
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
FD ++ D P+ T V++++A A AL
Sbjct: 187 FDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGAL 246
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
+ +H + EL+V+V TALV MYAK G + AR +F++++ + VVSWN MI +
Sbjct: 247 KWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAF 306
Query: 218 AMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
A HG +A DLF +M+ E +PD I F+ +L+AC+ G + + + D ++
Sbjct: 307 AEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHAL-DSGLEVD 365
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
V+ T +V + SG +D+A + +M+V+ + W A+++ HG L + ALE
Sbjct: 366 VRVGTALVHMYSKSGSIDDARVVFDRMKVR-NVVSWNAMISGLAQHG---LGQDALEVFR 421
Query: 337 ELEPH 341
+ H
Sbjct: 422 RMTAH 426
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 171/355 (48%), Gaps = 39/355 (10%)
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
AI + L+ GL+ D+F + LK C + +++H+ +I+++ E + V L+
Sbjct: 12 AIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLH 71
Query: 117 MYAKCSCVVNARQVFDKILER---------------------------------DPSEAT 143
+Y +C + AR VFD ++++ P+ T
Sbjct: 72 VYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGT 131
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
+ ++ A A ++AL G+E+H E +V+V TAL+ MY KCG + AR +F+ L
Sbjct: 132 YMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLM 191
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSAC-SRGGLFDEGR 261
++SW MI YA G+ +A L +M+ E +P+ IT+V +L+AC S G L R
Sbjct: 192 NHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKR 251
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
+ ++ D ++ V+ T +V + SG +D+A + +M+V+ D W ++ +
Sbjct: 252 VHRHAL--DAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVR-DVVSWNVMIGAFAE 308
Query: 322 HGHVKLA-ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIK 375
HG A +L L+ E DA ++ + N A A E V K+ + +D G++
Sbjct: 309 HGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLE 363
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/576 (38%), Positives = 329/576 (57%), Gaps = 65/576 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRA-------------- 47
GF + + + LV +YS + A Q FD +P++N+ ++N LI
Sbjct: 172 GFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLF 231
Query: 48 -----------------YAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIE 90
+ NG AI+L+ + L D +TF L AC + A++
Sbjct: 232 YDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQ 291
Query: 91 EGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER------------- 137
EG+++H +IR ++ ++FVG+AL+DMY KC + +A VF K+ +
Sbjct: 292 EGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYG 351
Query: 138 --------------------DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
+P + TL +VIS+ A++A+L +G + H + +
Sbjct: 352 QNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFIT 411
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDE 236
V ALV +Y KCG ++ + LF ++ VSW A+++GYA G + + L LFE M
Sbjct: 412 VSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHG 471
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+PD +TF+GVLSACSR GL +G FESM++++ I P HYTCM+DL +GRL+EA
Sbjct: 472 FKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEA 531
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARA 356
I +M PD W +LL+SC+ H ++++ + A E L++LEPH+ +Y++LS+IYA
Sbjct: 532 RKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAK 591
Query: 357 ANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRM 416
WE VA LRK M D+G++K CSWI+ KN+ H F + D S+P D+IY++L+ L +M
Sbjct: 592 GKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKM 651
Query: 417 KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCH 476
+ GYVP SV HDV++ EK M+ HSE+LAIAFGLI P G + + KNL++C DCH
Sbjct: 652 VQEGYVPDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCH 711
Query: 477 IAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
A K+ISKIT+REI VRD R+H FKDG CSCGD+W
Sbjct: 712 NATKYISKITQREILVRDAARFHLFKDGRCSCGDFW 747
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 146/342 (42%), Gaps = 72/342 (21%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ YS CL ++F +P R++ WN LI AYA G +++ Y +L G
Sbjct: 81 LLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNL 140
Query: 73 N-FTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
N L S + G ++H V++ +++ VFVG+ L+DMY+K V ARQ F
Sbjct: 141 NRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAF 200
Query: 132 DKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGL 191
D++ E+ NV + L+ +C
Sbjct: 201 DEMPEK-------------------------------------NVVMYNTLIAGLMRCSR 223
Query: 192 VKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSA 250
++ +R LF ++EK +SW AMI G+ +G +A+DLF +M+ + ++ D TF VL+A
Sbjct: 224 IEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTA 283
Query: 251 CSRGGLFDEGRMFFESMVRDYHID------------------------------PSVQHY 280
C EG+ ++R + D +V +
Sbjct: 284 CGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSW 343
Query: 281 TCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWGALLNSC 319
T M+ G +G +EA + M+ ++PD G++++SC
Sbjct: 344 TAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSC 385
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 115/281 (40%), Gaps = 59/281 (20%)
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEA 142
C L + ++IH +I+ ++F+ L+ YAK + AR+VFD++ +R+
Sbjct: 19 CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78
Query: 143 TLVTVISASADIAALPQ-GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
T++S+ + +A LP+ R H R N +L+ YA G + + +
Sbjct: 79 N--TLLSSYSKLACLPEMERVFHAMPTRDMVSWN-----SLISAYAGRGFLLQSVKAYNL 131
Query: 202 LREKRVVSWN--AMIT-------------GYAMHGHSTK--------------------- 225
+ + N A+ T G +HGH K
Sbjct: 132 MLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTG 191
Query: 226 ----ALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYT 281
A F++M ++ + T + L CSR + D ++F++ +D S+ +T
Sbjct: 192 LVFCARQAFDEMPEKNVVMYNTLIAGLMRCSR--IEDSRQLFYDMQEKD-----SIS-WT 243
Query: 282 CMVDLLGHSGRLDEACDLIMQMRVKP---DPGVWGALLNSC 319
M+ +G EA DL +MR++ D +G++L +C
Sbjct: 244 AMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTAC 284
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/539 (40%), Positives = 311/539 (57%), Gaps = 35/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ +Y+ C L A +LF +P+R+L WN +I YA A+ LY ++ G
Sbjct: 367 IGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEG 426
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P TF L AC+ SA +G+ IHED++R+ +++ + AL++MY +C ++ A+
Sbjct: 427 VKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQ 486
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
VF+ RD P T +V+S +
Sbjct: 487 NVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPE 546
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL G+++HG +L+V + AL++MY +CG ++ ARN+F L+ + V+SW AMI
Sbjct: 547 ALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIG 606
Query: 216 GYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
G A G KA++LF +M++E PD TF +LSAC+ GL EG F SM +Y +
Sbjct: 607 GCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGV 666
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P+++HY C+V LLG + R EA LI QM PD VW LL +C++HG++ LAE A
Sbjct: 667 LPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAAN 726
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
++L + Y++LSN+YA A W+ VAK+R++M RGI+K SWIEV N H F+
Sbjct: 727 NALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFI 786
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
+ D SHP EIYA+LK L M+EAGY P T+ V HD+ + +C HSERLAIA+G
Sbjct: 787 AADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYG 846
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LI TP GT + I KNL+IC DCH A KFISK+ REI RD NR+H FK+G CSC DYW
Sbjct: 847 LIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 905
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 168/349 (48%), Gaps = 36/349 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G G L+ L+++Y C + +AHQ+F +P+R++ WN LI YA G + A +L+
Sbjct: 57 GVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLF 116
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G +P+ T+ L AC + + +E G++IH +I+ ++ D V +L+ MY KC
Sbjct: 117 EEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKC 176
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ ARQVF I RD P + T + ++
Sbjct: 177 GDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLL 236
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A + L +G+ +H + +++V TALV M +CG V A+ F+ + ++ VV
Sbjct: 237 DAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVV 296
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+NA+I A HGH+ +A + + +M+ D V + T++ +L+ACS + G++ +
Sbjct: 297 VYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHI 356
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
D H VQ ++ + G L +A +L M K D W A++
Sbjct: 357 SEDGH-SSDVQIGNALISMYARCGDLPKARELFYTM-PKRDLISWNAII 403
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 184/385 (47%), Gaps = 38/385 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ P + L+ +Y C L A Q+F I R++ +N ++ YA + + L+
Sbjct: 158 GYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLF 217
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ G+ PD T+ L A + S ++EG+RIH+ + +D+ VG AL+ M +C
Sbjct: 218 GQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRC 277
Query: 122 SCVVNARQVFDKILERDP---------------------------------SEATLVTVI 148
V +A+Q F I +RD + T ++++
Sbjct: 278 GDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSIL 337
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A + AL G+ +H +V++ AL+ MYA+CG + AR LF + ++ ++
Sbjct: 338 NACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLI 397
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNA+I GYA +A+ L+++M+ E V+P +TF+ +LSAC+ + +G+M E +
Sbjct: 398 SWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDI 457
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+R I + ++++ G L EA ++ + + D W +++ HG +
Sbjct: 458 LRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYET 515
Query: 328 AELALEKLI--ELEPHDAGNYVILS 350
A +++ ELEP + +LS
Sbjct: 516 AYKLFQEMQNEELEPDNITFASVLS 540
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 136/287 (47%), Gaps = 36/287 (12%)
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
D T+ L+ C+ + E +RIH ++ D+F+ LI+MY KC V++A QVF
Sbjct: 26 DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 132 DKILERD---------------------------------PSEATLVTVISASADIAALP 158
++ RD P++ T +++++A A L
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
G+++H + ++ + +V+ +L+ MY KCG + AR +F + + VVS+N M+ YA
Sbjct: 146 NGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYA 205
Query: 219 MHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
+ + L LF +M E + PD +T++ +L A + + DEG+ + V + ++ +
Sbjct: 206 QKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE-GLNSDI 264
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+ T +V + G +D A + + D V+ AL+ + HGH
Sbjct: 265 RVGTALVTMCVRCGDVDSAKQAFKGIADR-DVVVYNALIAALAQHGH 310
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/545 (40%), Positives = 329/545 (60%), Gaps = 42/545 (7%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ P + L+++Y + L A LFD +P+RN+ W +I AY+ N + A++
Sbjct: 85 GYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCL 143
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ P+ FT+ L+AC L + R++H +I+ E+DVFV +ALID+Y+K
Sbjct: 144 ILMFREGVRPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKW 200
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
S + NA VFD++ RD +ATL +V+
Sbjct: 201 SDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVL 260
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A +A L GR++H + F+ ++ + AL+DMY KCG ++ A + F ++ EK V+
Sbjct: 261 RACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVI 318
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SW+ M+ G A +G+S +AL+LFE MK+ +P++IT +GVL ACS GL ++G +F SM
Sbjct: 319 SWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSM 378
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ + +DP +HY C++DLLG +GRLDEA LI +M +PD W LL +C++H +V L
Sbjct: 379 KKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDL 438
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
A A +K+IELEP DAG Y++LSNIYA WE VA++RK M +RGI+K+ CSWIEV
Sbjct: 439 AIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDK 498
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ H F+ GD SHP +EI +L L R+ GYVP T V D+E ++K + + HSE+
Sbjct: 499 QIHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEK 558
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAI FGL+N + I KNL+IC DCH+ K +S++ R I +RD RYHHF+DG+CS
Sbjct: 559 LAIMFGLMNLSREKTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCS 618
Query: 508 CGDYW 512
CGDYW
Sbjct: 619 CGDYW 623
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 142/300 (47%), Gaps = 34/300 (11%)
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ D T+ +K CSA A++EG+R+HE + +E +FV L++MY K + + A
Sbjct: 50 GVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEA 109
Query: 128 RQVFDKILERD-PSEATLVTVISASADIAA----------------------------LP 158
+FD++ ER+ S T+++ S + A LP
Sbjct: 110 EDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLP 169
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
R+LH + E +V V++AL+D+Y+K + A +F+++ + +V WN++I G+A
Sbjct: 170 NLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFA 229
Query: 219 MHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
+ +AL+LF++MK D T VL AC+ L + GR +++ D +
Sbjct: 230 QNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK---FDQDL 286
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
++D+ G L++A +M V+ D W ++ +G+ + A E + E
Sbjct: 287 ILNNALIDMYCKCGSLEDANSAFSRM-VEKDVISWSTMVAGLAQNGYSRQALELFESMKE 345
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/547 (40%), Positives = 323/547 (59%), Gaps = 42/547 (7%)
Query: 4 GFHPV--LATKLVHLYSACDCLHNAHQLFDRIP-QRNLFLWNVLIRAYAWNGPYEVAIEL 60
GFH + T L+ YS L NA +F + +N+ W +I NG +A L
Sbjct: 336 GFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAAL 395
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+ E G+ P++FT+ L A S +IH VI+ +E VG AL+ Y+K
Sbjct: 396 FSRMREDGVAPNDFTYSTILTA----SVASLPPQIHAQVIKTNYECTSIVGTALLASYSK 451
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
A +F I ++D P+E T+ +V
Sbjct: 452 LCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSV 511
Query: 148 ISASAD-IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
I A A A + GR+ H S +HR + V +ALV MYA+ G ++ A+ +FE+ ++
Sbjct: 512 IDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRD 571
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+VSWN+M++GYA HG+S KALD+F +M+ E ++ D +TF+ V+ C+ GL +EG+ +F+
Sbjct: 572 LVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFD 631
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
SM RDY I P+++HY CMVDL +G+LDEA LI M P VW LL +CK+H +V
Sbjct: 632 SMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNV 691
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+L +LA EKL+ LEP D+ YV+LSNIY+ A W+ ++RKLM + +KK CSWI++
Sbjct: 692 ELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQI 751
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
KNK H+F++ D SHP ++IYAKL+ + ++K+ GY P T H+V ++K M+ HS
Sbjct: 752 KNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGYCPDTSFALHEVAEEQKEAMLAMHS 811
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
ERLA+AFGLI TP G L I KNL++C DCH IK +SKI +REI +RD +R+HHF G+
Sbjct: 812 ERLALAFGLIATPPGAPLHIFKNLRVCGDCHTVIKMVSKIEDREIVMRDCSRFHHFNSGV 871
Query: 506 CSCGDYW 512
CSCGD+W
Sbjct: 872 CSCGDFW 878
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 131/277 (47%), Gaps = 35/277 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T LV +Y + + ++F+ +P+RN+ W L+ Y +G +EL++R+ G
Sbjct: 141 VGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEG 200
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P++ TF L ++ ++ GRR+H ++ + VFV +L++MYAKC V AR
Sbjct: 201 VWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEAR 260
Query: 129 QVFDKILERDP---------------------------------SEATLVTVISASADIA 155
VF + RD +++T TVI A+I
Sbjct: 261 VVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIK 320
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-EKRVVSWNAMI 214
L R+LH + F V TAL+D Y+K G + A ++F + + VVSW AMI
Sbjct: 321 QLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMI 380
Query: 215 TGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSA 250
G +G A LF +M+ D V P+ T+ +L+A
Sbjct: 381 NGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTA 417
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 160/365 (43%), Gaps = 43/365 (11%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI-GLVPDNFTFPFALKAC 83
A Q FD IP RN + + +A G A++ + + G LK C
Sbjct: 56 GARQAFDEIPHRNTL--DHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVC 113
Query: 84 SALSAIEEGRRIHEDVIRNKWE-TDVFVGAALIDMYAKCSCVVNARQVFDKILERD---- 138
++ G+++H IR + DV VG +L+DMY K VV+ R+VF+ + +R+
Sbjct: 114 GSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTW 173
Query: 139 -----------------------------PSEATLVTVISASADIAALPQGRELHGFSWR 169
P+ T +V+S A + GR +H S +
Sbjct: 174 TSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVK 233
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
V V +L++MYAKCGLV+ AR +F + + +VSWN ++ G ++GH +AL L
Sbjct: 234 FGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQL 293
Query: 230 FEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMV-RDYHIDPSVQHYTCMVDLL 287
F + + T+ V+ C+ R S++ R +H +V T ++D
Sbjct: 294 FHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVM--TALMDAY 351
Query: 288 GHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHDAGN 345
+G+L A D+ + M + W A++N C +G V LA ++ E + P+D
Sbjct: 352 SKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTY 411
Query: 346 YVILS 350
IL+
Sbjct: 412 STILT 416
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 170/377 (45%), Gaps = 43/377 (11%)
Query: 12 KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
L+++Y+ C + A +F + R++ WN L+ NG A++L++ +
Sbjct: 245 SLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITML 304
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS--------- 122
T+ +K C+ + + R++H V++ + + V AL+D Y+K
Sbjct: 305 TQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIF 364
Query: 123 ------------------CVVN-----ARQVFDKILERD--PSEATLVTVISASADIAAL 157
C+ N A +F ++ E P++ T T+++AS +A+L
Sbjct: 365 LLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTAS--VASL 422
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
P ++H + +E V TAL+ Y+K + A ++F+ + +K VVSW+AM+T Y
Sbjct: 423 PP--QIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCY 480
Query: 218 AMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSAC-SRGGLFDEGRMFFESMVRDYHIDP 275
A G S A ++F KM ++P+ T V+ AC S D GR F ++ +
Sbjct: 481 AQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIK-HRCHD 539
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
++ + +V + G ++ A I + + D W ++L+ HG+ + A L + +
Sbjct: 540 ALCVSSALVSMYARKGSIESA-QCIFERQTDRDLVSWNSMLSGYAQHGYSQKA-LDVFRQ 597
Query: 336 IELEPHDAGNYVILSNI 352
+E E + LS I
Sbjct: 598 MEAEGIEMDGVTFLSVI 614
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/549 (40%), Positives = 336/549 (61%), Gaps = 43/549 (7%)
Query: 6 HPVLATKLVHLYSACDC--LHNAHQLFDRIPQRNLFLWNVLIRAYAWN-GPYEVAIELYY 62
+P+ ++KL+ + L+ A +LF ++ + F+ N +IR YA + PYE A+ LYY
Sbjct: 42 NPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYE-AVSLYY 100
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
++E G+ DN+T+PF L AC+ L A++ GRR H +V++N + +D+FV ALI Y C
Sbjct: 101 FMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCG 160
Query: 123 CVVNARQVFDKILERD----------------------------------PSEATLVTVI 148
A VFD+ RD P E T+V+++
Sbjct: 161 SFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLV 220
Query: 149 SASADIAALPQGRELHGFSWR-HRFELN--VKVKTALVDMYAKCGLVKVARNLFEQLREK 205
A A + L +G+ LH +S +FE+N + ++TALVDMYAKCG + +A +F ++R +
Sbjct: 221 PACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR 280
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
V +WNA+I G AMHGH A+ LF++M+ D++ PD +TF+ +L ACS GL DEG F
Sbjct: 281 NVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMF 340
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
++M + I+P ++HY C+VDLL + ++D+A I M +K + +W LL +C+ GH
Sbjct: 341 QAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGH 400
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
LAE ++IELEP G YV+LSN+YA + W+ KLRK M ++GI+K+ CSWIE
Sbjct: 401 FDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIE 460
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK-EAGYVPGTESVFHDVENDEKANMICC 443
+ H F++GD SH ++IYA ++ + R+ + G+VPGT +V D+E +EK + +
Sbjct: 461 LNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFL 520
Query: 444 HSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKD 503
HSE+LAIA GLI+TP G+ + I KNL++C+DCH +K SK+ REI RD +R+HHFK+
Sbjct: 521 HSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKE 580
Query: 504 GICSCGDYW 512
G CSC D+W
Sbjct: 581 GSCSCMDFW 589
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/520 (42%), Positives = 323/520 (62%), Gaps = 13/520 (2%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAI-- 58
+GF ++ +A L+H+YS A LFD +P R++ WN +I NG A+
Sbjct: 144 LGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDV 203
Query: 59 --ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
E+ +++ V P + + L ++ ++ E +I K DV LI
Sbjct: 204 LDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFE-IIPVK---DVISWNTLIT 259
Query: 117 MYAKCSCVVNARQVF---DKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFE 173
YA+ A +V+ ++ E P++ T V+++ A A + AL QG ++HG +
Sbjct: 260 GYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLH 319
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
L+V V T L+D+Y KCG + A +LF Q+ ++ V+WNA+I+ + +HGH+ K L LF +M
Sbjct: 320 LDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEM 379
Query: 234 KDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGR 292
DE V+PDH+TFV +LSACS G +EG+ F M ++Y I PS++HY CMVDLLG +G
Sbjct: 380 LDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLGRAGY 438
Query: 293 LDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNI 352
L+ A D I M ++PD +WGALL +C++HG+++L + A ++L E++ + G YV+LSNI
Sbjct: 439 LEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNI 498
Query: 353 YARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWL 412
YA WEGV K+R L +RG+KK+ S IEV K F +G+ SHP C EIY +L+ L
Sbjct: 499 YANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVL 558
Query: 413 EGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKIC 472
+MK GY+P V DVE DEK +++ HSERLAIAFG+I+TP + + I KNL++C
Sbjct: 559 TAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVC 618
Query: 473 DDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
DCH A KFIS+IT+REI VRD NR+HHFKDGICSCGDYW
Sbjct: 619 GDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/377 (32%), Positives = 202/377 (53%), Gaps = 13/377 (3%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++T+LV+LY+ + + FD+IPQ++++ WN +I AY NG + AI +Y+LL +
Sbjct: 53 ISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVS 112
Query: 69 LV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
+ PD +TFP LKAC L +GR+IH + ++ +VFV A+LI MY++ A
Sbjct: 113 EIRPDFYTFPPVLKACGTLV---DGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIA 169
Query: 128 RQVFDKILERDPSE--ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
R +FD + RD A + +I AL E+ + F V + VDM
Sbjct: 170 RSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDM 229
Query: 186 YAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD--EVQPDHIT 243
YAK GL+ A +FE + K V+SWN +ITGYA +G +++A+++++ M++ E+ P+ T
Sbjct: 230 YAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGT 289
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
+V +L A + G +G +++ + H+D V TC++D+ G GRL +A L Q
Sbjct: 290 WVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVA--TCLIDVYGKCGRLVDAMSLFYQ 347
Query: 303 MRVKPDPGVWGALLNSCKLHGHV-KLAELALEKLIELEPHDAGNYVILSNIYARAANWEG 361
+ + W A+++ +HGH K +L E L E D +V L + + + E
Sbjct: 348 VP-QESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEE 406
Query: 362 VAKLRKLMIDRGIKKSI 378
+LM + GIK S+
Sbjct: 407 GKWCFRLMQEYGIKPSL 423
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK-- 232
++ + T LV++YA G V ++R F+Q+ +K V +WN+MI+ Y +GH +A+ F +
Sbjct: 50 SIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLL 109
Query: 233 MKDEVQPDHITFVGVLSACSRGGLFDEGR 261
+ E++PD TF VL AC G +GR
Sbjct: 110 LVSEIRPDFYTFPPVLKAC---GTLVDGR 135
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/540 (42%), Positives = 321/540 (59%), Gaps = 36/540 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++ KL+ LY+ L + ++FDR+ R+L WN +I+AY N AI L+ +
Sbjct: 284 VSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR 343
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAKCSCVVNA 127
+ PD T S L I R + +R W D+ +G A++ MYAK V +A
Sbjct: 344 IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSA 403
Query: 128 RQVFD------------------------------KILERD----PSEATLVTVISASAD 153
R VF+ I+E + ++ T V+V+ A +
Sbjct: 404 RAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQ 463
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
AL QG +LHG ++ L+V V T+L DMY KCG ++ A +LF Q+ V WN +
Sbjct: 464 AGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTL 523
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I + HGH KA+ LF++M DE V+PDHITFV +LSACS GL DEG+ FE M DY
Sbjct: 524 IACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYG 583
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I PS++HY CMVD+ G +G+L+ A I M ++PD +WGALL++C++HG+V L ++A
Sbjct: 584 ITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIAS 643
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
E L E+EP G +V+LSN+YA A WEGV ++R + +G++K+ S +EV NK F
Sbjct: 644 EHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVF 703
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
+G+ +HP +E+Y +L L+ ++K GYVP V DVE+DEK +++ HSERLAIAF
Sbjct: 704 YTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAF 763
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LI TP T + I KNL++C DCH KFISKITEREI VRD NR+HHFK+G+CSCGDYW
Sbjct: 764 ALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 200/418 (47%), Gaps = 48/418 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
GF + +A L+HLYS + NA LFD +P R++ WN +I Y +G + A+ L
Sbjct: 179 FGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL 238
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
L + D+ T L AC+ G IH I++ E+++FV LID+YA+
Sbjct: 239 SNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ + ++VFD++ RD P TL+++
Sbjct: 295 FGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISL 354
Query: 148 ISASADIAALPQGRELHGFSWRHRFEL-NVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
S + + + R + GF+ R + L ++ + A+V MYAK GLV AR +F L
Sbjct: 355 ASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTD 414
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKD--EVQPDHITFVGVLSACSRGGLFDEGRMFF 264
V+SWN +I+GYA +G +++A++++ M++ E+ + T+V VL ACS+ G +G
Sbjct: 415 VISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLH 474
Query: 265 ESMVRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM-RVKPDPGVWGALLNSCKLH 322
++++ ++D V T + D+ G GRL++A L Q+ RV P W L+ H
Sbjct: 475 GRLLKNGLYLDVFV--VTSLADMYGKCGRLEDALSLFYQIPRVNSVP--WNTLIACHGFH 530
Query: 323 GHVKLAELALEKLIE--LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
GH + A + +++++ ++P +LS EG + D GI S+
Sbjct: 531 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSL 588
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 140/278 (50%), Gaps = 34/278 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR-LLEI 67
++ KLV+LY + A FD I R+++ WN++I Y G I + +L
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
GL PD TFP LKAC + +G +IH ++ + DV+V A+LI +Y++ V NA
Sbjct: 148 GLTPDYRTFPSVLKACRT---VIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 204
Query: 128 RQVFDKILERDPS-----------------------------EATLVTVISASADIAALP 158
R +FD++ RD T+V+++SA +
Sbjct: 205 RILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFN 264
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
+G +H +S +H E + V L+D+YA+ G ++ + +F+++ + ++SWN++I Y
Sbjct: 265 RGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYE 324
Query: 219 MHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGG 255
++ +A+ LF++M+ +QPD +T + + S S+ G
Sbjct: 325 LNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 143/321 (44%), Gaps = 45/321 (14%)
Query: 89 IEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---------- 138
++ + +H ++ +K +V + A L+++Y V AR FD I RD
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 139 ------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFEL 174
P T +V+ A + G ++H + + F
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI---DGNKIHCLALKFGFMW 183
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
+V V +L+ +Y++ V AR LF+++ + + SWNAMI+GY G++ +AL L ++
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 235 DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLD 294
D +T V +LSAC+ G F+ G ++ + ++ + ++DL GRL
Sbjct: 244 ---AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYAEFGRLR 299
Query: 295 EACDLIMQMRVKPDPGVWGALLNSCKLHGH-VKLAELALE-KLIELEPHDAGNYVILSNI 352
+ + +M V+ D W +++ + +L+ ++ L E +L ++P D + L++I
Sbjct: 300 DCQKVFDRMYVR-DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP-DCLTLISLASI 357
Query: 353 YARAANWEGVAKLRKLMIDRG 373
++ + ++ + +G
Sbjct: 358 LSQLGDIRACRSVQGFTLRKG 378
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/545 (38%), Positives = 323/545 (59%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + ++A + Y+ C L ++ ++FD + + + WN L+ YA N A++LY
Sbjct: 337 GLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLY 396
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ + GL PD FT L ACS + ++ G IH +RN D F+G +L+ +Y C
Sbjct: 397 LQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICC 456
Query: 122 SCVVNARQVFDKILER---------------------------------DPSEATLVTVI 148
A+ +FD + R P E ++ V
Sbjct: 457 GKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVC 516
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A + ++AL G+ELH F+ + ++ V ++++DMYAK G + +++ +F++LREK V
Sbjct: 517 GACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVA 576
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWN +I GY +HG +AL+LFEKM + ++PD TF G+L ACS GL ++G +F M
Sbjct: 577 SWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQM 636
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ ++I+P ++HYTC+VD+LG +GR+D+A LI +M PD +W +LL+SC++HG++ L
Sbjct: 637 LNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGL 696
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E KL+ELEP NYV++SN++A + W+ V ++R M D G++K CSWIEV
Sbjct: 697 GEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGG 756
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K H FL GD P +E+ + LE ++ GY P T SV HD+E ++K ++ HSE+
Sbjct: 757 KVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEK 816
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAI+FGL+NT G + + KNL+IC DCH A KFISK+ R+I VRD R+HHF+DGICS
Sbjct: 817 LAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICS 876
Query: 508 CGDYW 512
CGDYW
Sbjct: 877 CGDYW 881
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 142/283 (50%), Gaps = 39/283 (13%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL T+++ +YS C ++ +FD++ ++NLF WN ++ AY N +E A+ ++ L+ +
Sbjct: 35 VLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISV 94
Query: 68 GL-VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
PDNFT P +KAC+ L + G+ IH + +DVFVG ALI MY KC V
Sbjct: 95 TEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEE 154
Query: 127 ARQVFDKILERD-----------------------------------PSEATLVTVISAS 151
A +VF+ + ER+ P ATLVTV+
Sbjct: 155 AVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVC 214
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
A + +G +HG + + + V +L+DMY+KC + A+ LF++ +K +VSWN
Sbjct: 215 AGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWN 274
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE---VQPDHITFVGVLSAC 251
+MI GYA + L +KM+ E ++ D T + VL C
Sbjct: 275 SMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVC 317
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 38/283 (13%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL--E 66
+ L+ +Y C + A ++F+ +P+RNL WN +I ++ NG + + + +L E
Sbjct: 138 VGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGE 197
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
VPD T L C+ IE+G +H ++ ++ V +LIDMY+KC +
Sbjct: 198 ESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSE 257
Query: 127 ARQVFDK---------------------------ILER--------DPSEATLVTVISAS 151
A+ +FDK +L++ E T++ V+
Sbjct: 258 AQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVC 317
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+ + L +ELHG+SWRH + N V A + Y +CG + + +F+ + K V SWN
Sbjct: 318 LERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWN 377
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSR 253
A++ GYA + KALDL+ +M D + PD T +L ACSR
Sbjct: 378 ALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSR 420
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 168/383 (43%), Gaps = 46/383 (12%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G ++ L+ +YS C L A LFD+ ++N+ WN +I YA E
Sbjct: 233 LGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYARE---EDVCRT 289
Query: 61 YYRLLEI-----GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALI 115
+Y L ++ + D FT L C S ++ + +H R+ +++ V A I
Sbjct: 290 FYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFI 349
Query: 116 DMYAKCSCVVNARQVFDKILER---------------------------------DPSEA 142
Y +C + ++ +VFD + + DP
Sbjct: 350 AAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWF 409
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T+ +++ A + + +L G E+HGF+ R+ ++ + +L+ +Y CG A+ LF+ +
Sbjct: 410 TIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGM 469
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGR 261
+ +VSWN MI GY+ +G +A++LF +M D +QP I + V ACS+ G+
Sbjct: 470 EHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGK 529
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
H+ + + ++D+ G + + + ++R K D W ++ +
Sbjct: 530 E-LHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREK-DVASWNVIIAGYGI 587
Query: 322 HGHVKLAELALEKLIE--LEPHD 342
HG K A EK++ L+P D
Sbjct: 588 HGRGKEALELFEKMLRLGLKPDD 610
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 38/211 (18%)
Query: 80 LKACSALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYAKCSCVVNARQVFDK----- 133
L+AC IE GRR+HE V ++ D + +I MY+ C ++R VFDK
Sbjct: 5 LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKN 64
Query: 134 -----------------------------ILERDPSEATLVTVISASADIAALPQGRELH 164
+ E P TL VI A A + L G+ +H
Sbjct: 65 LFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIH 124
Query: 165 GFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST 224
G + + +V V AL+ MY KCGLV+ A +FE + E+ +VSWN++I G++ +G
Sbjct: 125 GMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQ 184
Query: 225 KALDLFEKM---KDEVQPDHITFVGVLSACS 252
++ + F +M ++ PD T V VL C+
Sbjct: 185 ESFNAFREMLVGEESFVPDVATLVTVLPVCA 215
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 6/148 (4%)
Query: 160 GRELHGF-SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
GR LH S +F + + T ++ MY+ CG +R +F++LR K + WNA+++ Y
Sbjct: 17 GRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYT 76
Query: 219 MHGHSTKALDLFEKMKD--EVQPDHITFVGVLSACSRGGLFDEG-RMFFESMVRDYHIDP 275
+ A+ +F ++ E +PD+ T V+ AC+ GL D G M +
Sbjct: 77 RNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACA--GLLDLGLGQIIHGMATKMDLVS 134
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQM 303
V ++ + G G ++EA + M
Sbjct: 135 DVFVGNALIAMYGKCGLVEEAVKVFEHM 162
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/538 (40%), Positives = 330/538 (61%), Gaps = 36/538 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y++ + +AH++FD IP +++ WN I YA G Y+ A+EL+ ++++ +
Sbjct: 173 TALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVR 232
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD T L AC+ +IE GR++H + + + ++ + ALID+Y+KC + A +
Sbjct: 233 PDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGL 292
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F + +D P++ T+++++SA A + A+
Sbjct: 293 FQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAI 352
Query: 158 PQGRELHGF-SWRHRFELNVK-VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
GR +H + R + N ++T+L+DMYAKCG ++ A+ +F+ + + + SWNAMI
Sbjct: 353 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIF 412
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+AMHG + A D+F +M K+ ++PD ITFVG+LSACS G+ D GR F SM RDY +
Sbjct: 413 GFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLM 472
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY CM+DL GHSG EA +I M ++PD +W +LL +CK+HG+V+L E +
Sbjct: 473 PKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQN 532
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
LI++EP + G+YV+LSNIYA A W VAK R L+ D+G+KK CS IE+ + H F+
Sbjct: 533 LIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFII 592
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD HP EIY L+ +E ++EAG+VP T V ++E + K + HSE+LAIAFGL
Sbjct: 593 GDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGL 652
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I+T GT+L I KNL++C +CH A K ISKI +REI RD R+HHF+DG CSC DYW
Sbjct: 653 ISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 167/333 (50%), Gaps = 42/333 (12%)
Query: 21 DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
D L A +FD I + L +WN + R +A + A++LY ++ +GL+P+++TFPF L
Sbjct: 51 DGLPYAISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLL 110
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPS 140
K+C+ A +EG+++H V++ ++ D+++ +LI MY + + +A++V DK RD
Sbjct: 111 KSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRD-- 168
Query: 141 EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
V TAL+ YA G ++ A +F+
Sbjct: 169 -----------------------------------VVSYTALITGYASRGXIESAHKMFD 193
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEK-MKDEVQPDHITFVGVLSACSRGGLFDE 259
++ K VVSWNA I+GYA G+ +AL+LF+K MK V+PD T V VLSAC++ G +
Sbjct: 194 EIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIEL 253
Query: 260 GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC 319
GR S + D+ +++ ++DL G L+ AC L + K D W L+
Sbjct: 254 GRQ-VHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNK-DVISWNTLIGGY 311
Query: 320 KLHGHVKLAELALEKLIEL--EPHDAGNYVILS 350
K A L + ++ +P+D ILS
Sbjct: 312 THMNLYKEALLLFQDMLRSGEKPNDVTMLSILS 344
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 146/325 (44%), Gaps = 28/325 (8%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + + L+ LYS C L A LF + +++ WN LI Y Y+ A+ L+
Sbjct: 265 GFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLF 324
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDV-IRNKWETDV-FVGAALIDMYA 119
+L G P++ T L AC+ L AI+ GR IH + R K T+ + +LIDMYA
Sbjct: 325 QDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 384
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALP-QGRELHGFSWRHRFELN--V 176
KC + A+QVFD +L R S S +A I GR F R N
Sbjct: 385 KCGDIEAAQQVFDSMLNRSLS--------SWNAMIFGFAMHGRANAAFDIFSRMRKNGIE 436
Query: 177 KVKTALVDMYAKC---GLVKVARNLFEQL-REKRVVS----WNAMITGYAMHGHSTKALD 228
V + + C G++ + R++F + R+ +++ + MI G +A
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEK 496
Query: 229 LFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
+ M E++PD + + +L AC G + G + +++++ +P Y + ++
Sbjct: 497 MINTM--EMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPG--SYVLLSNIYA 552
Query: 289 HSGRLDEACD---LIMQMRVKPDPG 310
+ R +E L+ +K PG
Sbjct: 553 TAERWNEVAKTRALLNDKGMKKVPG 577
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/514 (42%), Positives = 317/514 (61%), Gaps = 31/514 (6%)
Query: 28 QLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALS 87
++FD + + N+FLWN +I+ N AI LYY ++ P+ +T+P LKACS
Sbjct: 113 RVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAG 172
Query: 88 AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD-KILERD-------- 138
+ EG ++H ++++ D + ++ I MYA +V AR++ D K E D
Sbjct: 173 VVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCMPDRK 232
Query: 139 -------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
P + L +V+SA A++ AL QGR +H ++ R+ +L+ +
Sbjct: 233 GCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLG 292
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP 239
T+LVDMYAKCG + +A +FE++ K V SWNAMI G AMHG + A+DLF KM ++ P
Sbjct: 293 TSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM--DINP 350
Query: 240 DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
+ ITFVGVL+AC+ GGL +G F SM ++Y ++P ++HY C+VDLLG +G L EA +
Sbjct: 351 NEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKV 410
Query: 300 IMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANW 359
+ + +P P VWGALL +C+ HG+V+L E + L+ELEP ++G Y +LSNIYA+A W
Sbjct: 411 VSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRW 470
Query: 360 EGVAKLRKLMIDRGIKKSIACSWIEV-KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKE 418
E V ++RKLM +RGIK + S I++ + + H F+ GD SHP +IY L ++ R++
Sbjct: 471 EEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQM 530
Query: 419 AGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIA 478
GY P V D++ +EK + HSE+LAI FGLINT GT + I KNL++C+DCH A
Sbjct: 531 EGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSA 590
Query: 479 IKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
K IS++ REI VRD RYHHF++G CSC D+W
Sbjct: 591 TKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 624
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/545 (41%), Positives = 321/545 (58%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+G + +++LY+ C + A ++FD++ +R+L W +I A NG A+++Y
Sbjct: 135 GYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIY 194
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ + + D ++AC+ L + G IH +IR DV V +L+DMYAK
Sbjct: 195 RQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKN 254
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ A VF ++L ++ P +LV+V+
Sbjct: 255 GHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVL 314
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A + + L G+ +HG+ R R + TA++DMY+KCG + AR +F+Q+ + +
Sbjct: 315 LACSQVGFLKLGKSVHGYIVR-RLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSI 373
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNA+I Y +HG +AL LF +M++ V+PDH TF +LSA S GL ++GR +F M
Sbjct: 374 SWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIM 433
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
V +Y I PS +HY CMVDLL +GR++EA +LI M +P +W ALL+ C HG +
Sbjct: 434 VNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLI 493
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E+A +K++EL P D G Y ++SN +A A W+ VA++RK+M G+KK S +EV
Sbjct: 494 GEMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNG 553
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K HAFL D SH +EI L L+ MK GYVP TE V H++E + K M+C HSER
Sbjct: 554 KLHAFLMEDKSHHQYEEIMQVLGKLDYEMKAMGYVPKTEFVLHNLEEEVKERMLCNHSER 613
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGL+NT GTRLLITKNL++C DCH A KFISKI REI VRDV R+HHFKDG+CS
Sbjct: 614 LAIAFGLLNTGPGTRLLITKNLRVCGDCHEATKFISKIVNREIVVRDVKRFHHFKDGVCS 673
Query: 508 CGDYW 512
CGDYW
Sbjct: 674 CGDYW 678
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 199/430 (46%), Gaps = 74/430 (17%)
Query: 12 KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
KL+ Y+ + +A Q+FD+ PQ + WN +I AY+ G A+ LY+R+ G+ P
Sbjct: 44 KLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRP 103
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
D+ T+ LKAC+ + G + + DVFVGAA++++YAKC + A +VF
Sbjct: 104 DSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVF 163
Query: 132 DKILERD----------------PSEA-----------------TLVTVISASADIAALP 158
DK+ RD EA ++ +I A +
Sbjct: 164 DKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSK 223
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
G +HG+ R ++V V+T+LVDMYAK G +++A +F ++ K V+SW+A+I+G+A
Sbjct: 224 MGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFA 283
Query: 219 MHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
+G + AL L M+ +PD ++ V VL ACS+ G G+ +VR H D
Sbjct: 284 QNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHFDCVS 343
Query: 278 QHYTCMVDLLGHSGRL-------------------------------DEACDLIMQMR-- 304
T ++D+ G L +EA L +QMR
Sbjct: 344 S--TAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRET 401
Query: 305 -VKPDPGVWGALLNSCKLHGHVKLAELALEKLI---ELEPHDAGNYVILSNIYARAANWE 360
VKPD + +LL++ G V+ ++ +++P + +Y + ++ +RA E
Sbjct: 402 NVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEK-HYACMVDLLSRAGRVE 460
Query: 361 GVAKLRKLMI 370
+L + MI
Sbjct: 461 EAQELIESMI 470
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/539 (41%), Positives = 314/539 (58%), Gaps = 34/539 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+ L+ C + +A LF + R+ W ++ NG A++++ R+
Sbjct: 213 VMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAE 272
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ D +TF L AC AL+A EEG++IH + R +E +VFVG+AL+DMY+KC + A
Sbjct: 273 GVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLA 332
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
VF ++ R+ P + TL +VIS+ A++
Sbjct: 333 EAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANL 392
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
A+L +G + H + + V ALV +Y KCG ++ A LF+++ VSW A++
Sbjct: 393 ASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALV 452
Query: 215 TGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
TGYA G + + +DLFEKM + ++PD +TF+GVLSACSR GL ++G +F+SM +D+ I
Sbjct: 453 TGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDI 512
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P HYTCM+DL SGR EA + I QM PD W LL+SC+L G++++ + A E
Sbjct: 513 VPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAE 572
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
L+E +P + +YV+L +++A W VA LR+ M DR +KK CSWI+ KNK H F
Sbjct: 573 NLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFS 632
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
+ D SHP IY KL+WL +M E GY P SV HDV + +K +MI HSE+LAIAFG
Sbjct: 633 ADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFG 692
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LI P + I KNL++C DCH A KFISKIT R+I VRD R+H F DG CSCGD+W
Sbjct: 693 LIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 164/366 (44%), Gaps = 54/366 (14%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-EIGLVPDNFTFPFALKAC 83
+ +LF +P+R+ +N LI ++ G +++LY LL E + P T +
Sbjct: 97 DMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVA 156
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEAT 143
SALS G +H V+R + FVG+ L+DMYAK + +AR+VF ++ EA
Sbjct: 157 SALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEM------EAK 210
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
V + + L+ +C +++ A+ LF+ +
Sbjct: 211 TVVMYN-------------------------------TLITGLLRCKMIEDAKGLFQLMV 239
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRM 262
++ ++W M+TG +G +ALD+F +M+ E V D TF +L+AC +EG+
Sbjct: 240 DRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQ 299
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLG--HSGRLDEACDLIMQMRVKPDPGVWGALL---- 316
+ R ++ D +V + +VD+ S RL EA M R + W A++
Sbjct: 300 IHAYITRTWYED-NVFVGSALVDMYSKCRSIRLAEAVFRRMTCR---NIISWTAMIVGYG 355
Query: 317 -NSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIK 375
N+C +E+ ++ ++P D ++S+ A A+ E A+ L + G+
Sbjct: 356 QNACSEEAVRAFSEMQMDG---IKPDDFTLGSVISSC-ANLASLEEGAQFHCLALVSGLM 411
Query: 376 KSIACS 381
+ I S
Sbjct: 412 RYITVS 417
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/538 (41%), Positives = 318/538 (59%), Gaps = 34/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ LV +Y+ L +A ++FD + R+L L N LI + G ++ A+ L+Y L + G
Sbjct: 340 IGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEG 399
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L + T LK+ ++L A R++H ++ + D V LID Y KCSC+ +A
Sbjct: 400 LGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDAN 459
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+VF++ D P L ++++A A ++
Sbjct: 460 RVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 519
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
A QG+++H + +F + ALV YAKCG ++ A F L E+ VVSW+AMI
Sbjct: 520 AYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIG 579
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G A HGH +AL+LF +M DE + P+HIT VL AC+ GL DE + +F SM + ID
Sbjct: 580 GLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGID 639
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
+ +HY+CM+DLLG +G+LD+A +L+ M + + +WGALL + ++H +L +LA EK
Sbjct: 640 RTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEK 699
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L LEP +G +V+L+N YA A W VAK+RKLM D IKK A SWIEVK+K H F+
Sbjct: 700 LFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIV 759
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD SHP EIYAKL L M +AG+VP + HD++ EK ++ HSERLA+AF L
Sbjct: 760 GDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFAL 819
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++TP G + + KNL+IC DCH+A KFISKI REI +RD+NR+HHF+DG CSCGDYW
Sbjct: 820 LSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 168/373 (45%), Gaps = 40/373 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG+ A LV +Y + A +F+++P ++ WN LI NG AIEL
Sbjct: 231 MGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIEL 290
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
++ GLVP+ FT LKACS A + GR+IH +I+ ++D ++G L+DMYAK
Sbjct: 291 LLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK 350
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ +AR+VFD + RD + TL V
Sbjct: 351 NHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAV 410
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ ++A + A R++H + + F + V L+D Y KC + A +FE+ +
Sbjct: 411 LKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDI 470
Query: 208 VSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
++ +MIT + H A+ LF E ++ ++PD +L+AC+ +++G+
Sbjct: 471 IACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAH 530
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGH 324
+++ + + +V G +++A + P+ GV W A++ HGH
Sbjct: 531 LIKRQFMSDAFAG-NALVYTYAKCGSIEDA---ELAFSSLPERGVVSWSAMIGGLAQHGH 586
Query: 325 VKLAELALEKLIE 337
K A ++++
Sbjct: 587 GKRALELFGRMVD 599
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 175/392 (44%), Gaps = 44/392 (11%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ YS C A ++FD IP W+ L+ AY+ NG AI+ ++ + G+ +
Sbjct: 43 LISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
F P LK + G ++H + + +DVFV AL+ MY + +AR+VF+
Sbjct: 103 EFALPVVLK---CVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFN 159
Query: 133 KI-LERD---------------------------------PSEATLVTVISASADIAALP 158
+ ER+ P+E V++A +
Sbjct: 160 EADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIE 219
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
GR++H R ++ +V ALVDMY K G V +A +FE++ + VVSWNA+I+G
Sbjct: 220 AGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCV 279
Query: 219 MHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
++GH +A++L +MK + P+ T +L ACS G FD GR M++ + D
Sbjct: 280 LNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIK-ANADSDD 338
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+VD+ + LD+A + M D + AL++ C H + AL E
Sbjct: 339 YIGVGLVDMYAKNHFLDDARKVFDWM-FHRDLILCNALISGCS---HGGRHDEALSLFYE 394
Query: 338 LEPHDAG-NYVILSNIYARAANWEGVAKLRKL 368
L G N L+ + A+ E + R++
Sbjct: 395 LRKEGLGVNRTTLAAVLKSTASLEAASTTRQV 426
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 122/493 (24%), Positives = 202/493 (40%), Gaps = 89/493 (18%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRI-PQRNLFLWNVLIRAYAWNGPYEVAIEL 60
GFG +A LV +Y + +A ++F+ +RN WN L+ AY N AI++
Sbjct: 130 GFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQV 189
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ G+ P F F + AC+ IE GR++H V+R ++ DVF AL+DMY K
Sbjct: 190 FGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMK 249
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
V A +F+K+ + D P+ TL ++
Sbjct: 250 MGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSI 309
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A + A GR++HGF + + + + LVDMYAK + AR +F+ + + +
Sbjct: 310 LKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDL 369
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR----- 261
+ NA+I+G + G +AL LF +++ E + + T VL + + R
Sbjct: 370 ILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHAL 429
Query: 262 -----MFFESMVRDYHIDP--------------------SVQHYTCMVDLLGHSGRLDEA 296
F++ V + ID + T M+ L + A
Sbjct: 430 AVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGA 489
Query: 297 CDLIMQMRVK---PDPGVWGALLNSCKLHGHVKLAELALEKLIE---LEPHDAGNYVILS 350
L M+M K PDP V +LLN+C + + LI+ + AGN ++ +
Sbjct: 490 IKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYT 549
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
YA+ + E + +RG+ SW A + G A H +
Sbjct: 550 --YAKCGSIEDAELAFSSLPERGV-----VSW-------SAMIGGLAQHGHGKRALE--- 592
Query: 411 WLEGRMKEAGYVP 423
L GRM + G P
Sbjct: 593 -LFGRMVDEGINP 604
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/538 (41%), Positives = 318/538 (59%), Gaps = 34/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ LV +Y+ L +A ++FD + R+L L N LI + G ++ A+ L+Y L + G
Sbjct: 340 IGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEG 399
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L + T LK+ ++L A R++H ++ + D V LID Y KCSC+ +A
Sbjct: 400 LGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDAN 459
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+VF++ D P L ++++A A ++
Sbjct: 460 RVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 519
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
A QG+++H + +F + ALV YAKCG ++ A F L E+ VVSW+AMI
Sbjct: 520 AYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIG 579
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G A HGH +AL+LF +M DE + P+HIT VL AC+ GL DE + +F SM + ID
Sbjct: 580 GLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGID 639
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
+ +HY+CM+DLLG +G+LD+A +L+ M + + +WGALL + ++H +L +LA EK
Sbjct: 640 RTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEK 699
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L LEP +G +V+L+N YA A W VAK+RKLM D IKK A SWIEVK+K H F+
Sbjct: 700 LFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIV 759
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD SHP EIYAKL L M +AG+VP + HD++ EK ++ HSERLA+AF L
Sbjct: 760 GDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFAL 819
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++TP G + + KNL+IC DCH+A KFISKI REI +RD+NR+HHF+DG CSCGDYW
Sbjct: 820 LSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 168/373 (45%), Gaps = 40/373 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG+ A LV +Y + A +F+++P ++ WN LI NG AIEL
Sbjct: 231 MGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIEL 290
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
++ GLVP+ FT LKACS A + GR+IH +I+ ++D ++G L+DMYAK
Sbjct: 291 LLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK 350
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ +AR+VFD + RD + TL V
Sbjct: 351 NHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAV 410
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ ++A + A R++H + + F + V L+D Y KC + A +FE+ +
Sbjct: 411 LKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDI 470
Query: 208 VSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
++ +MIT + H A+ LF E ++ ++PD +L+AC+ +++G+
Sbjct: 471 IACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAH 530
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGH 324
+++ + + +V G +++A + P+ GV W A++ HGH
Sbjct: 531 LIKRQFMSDAFAG-NALVYTYAKCGSIEDA---ELAFSSLPERGVVSWSAMIGGLAQHGH 586
Query: 325 VKLAELALEKLIE 337
K A ++++
Sbjct: 587 GKRALELFGRMVD 599
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 174/392 (44%), Gaps = 44/392 (11%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ YS C A + FD IP W+ L+ AY+ NG AI+ ++ + G+ +
Sbjct: 43 LISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
F P LK + G ++H + + +DVFV AL+ MY + +AR+VF+
Sbjct: 103 EFALPVVLK---CVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFN 159
Query: 133 KI-LERD---------------------------------PSEATLVTVISASADIAALP 158
+ ER+ P+E V++A +
Sbjct: 160 EADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIE 219
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
GR++H R ++ +V ALVDMY K G V +A +FE++ + VVSWNA+I+G
Sbjct: 220 AGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCV 279
Query: 219 MHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
++GH +A++L +MK + P+ T +L ACS G FD GR M++ + D
Sbjct: 280 LNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIK-ANADSDD 338
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+VD+ + LD+A + M D + AL++ C H + AL E
Sbjct: 339 YIGVGLVDMYAKNHFLDDARKVFDWM-FHRDLILCNALISGCS---HGGRHDEALSLFYE 394
Query: 338 LEPHDAG-NYVILSNIYARAANWEGVAKLRKL 368
L G N L+ + A+ E + R++
Sbjct: 395 LRKEGLGVNRTTLAAVLKSTASLEAASTTRQV 426
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 122/493 (24%), Positives = 202/493 (40%), Gaps = 89/493 (18%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRI-PQRNLFLWNVLIRAYAWNGPYEVAIEL 60
GFG +A LV +Y + +A ++F+ +RN WN L+ AY N AI++
Sbjct: 130 GFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQV 189
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ G+ P F F + AC+ IE GR++H V+R ++ DVF AL+DMY K
Sbjct: 190 FGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMK 249
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
V A +F+K+ + D P+ TL ++
Sbjct: 250 MGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSI 309
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A + A GR++HGF + + + + LVDMYAK + AR +F+ + + +
Sbjct: 310 LKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDL 369
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR----- 261
+ NA+I+G + G +AL LF +++ E + + T VL + + R
Sbjct: 370 ILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHAL 429
Query: 262 -----MFFESMVRDYHIDP--------------------SVQHYTCMVDLLGHSGRLDEA 296
F++ V + ID + T M+ L + A
Sbjct: 430 AVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGA 489
Query: 297 CDLIMQMRVK---PDPGVWGALLNSCKLHGHVKLAELALEKLIE---LEPHDAGNYVILS 350
L M+M K PDP V +LLN+C + + LI+ + AGN ++ +
Sbjct: 490 IKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYT 549
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
YA+ + E + +RG+ SW A + G A H +
Sbjct: 550 --YAKCGSIEDAELAFSSLPERGV-----VSW-------SAMIGGLAQHGHGKRALE--- 592
Query: 411 WLEGRMKEAGYVP 423
L GRM + G P
Sbjct: 593 -LFGRMVDEGINP 604
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/547 (40%), Positives = 325/547 (59%), Gaps = 40/547 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP-QRNLFLWNVLIRAYAWNGPYEVAIEL 60
GF + T L YS C L +A +F RN+ W +I NG +A+ L
Sbjct: 332 GFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVL 391
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+ E ++P+ FT+ LKA +LS + +IH VI+ ++ FVG AL+ Y+K
Sbjct: 392 FSRMREDRVMPNEFTYSAMLKA--SLSILPP--QIHAQVIKTNYQHIPFVGTALLASYSK 447
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+A +F I ++D P+E T+ +V
Sbjct: 448 FGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSV 507
Query: 148 ISASA-DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
I A A A + QGR+ H S ++R+ + V +ALV MY++ G + A+ +FE+ ++
Sbjct: 508 IDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRD 567
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+VSWN+MI+GYA HG+S KA++ F +M+ +Q D +TF+ V+ C+ GL EG+ +F+
Sbjct: 568 LVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFD 627
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
SMVRD+ I+P+++HY CMVDL +G+LDE LI M VW LL +C++H +V
Sbjct: 628 SMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNV 687
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+L + + +KL+ LEPHD+ YV+LSNIYA A W+ ++RKLM R +KK CSWI++
Sbjct: 688 ELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQI 747
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
KNK H+F++ D SHP D+IY KLK + R+K+ GY P T V HD+ D+K M+ HS
Sbjct: 748 KNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHS 807
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
ERLA+AFGLI TP GT L I KNL++C DCH+ +K +S I +REI +RD +R+HHF G
Sbjct: 808 ERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGA 867
Query: 506 CSCGDYW 512
CSCGD+W
Sbjct: 868 CSCGDFW 874
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 134/276 (48%), Gaps = 35/276 (12%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
T LV +Y C + ++F+ +P++N+ W L+ A + + L++R+ G+
Sbjct: 138 GTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGI 197
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
P+ FTF L A ++ A++ G+R+H ++ + VFV +L++MYAKC V +A+
Sbjct: 198 WPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKS 257
Query: 130 VFDKILERD---------------------------------PSEATLVTVISASADIAA 156
VF+ + RD +++T TVI A++
Sbjct: 258 VFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQ 317
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR-VVSWNAMIT 215
L R+LH +H F L V TAL D Y+KCG + A N+F R VVSW A+I+
Sbjct: 318 LALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIIS 377
Query: 216 GYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSA 250
G +G A+ LF +M+ D V P+ T+ +L A
Sbjct: 378 GCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA 413
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 154/345 (44%), Gaps = 39/345 (11%)
Query: 30 FDRIPQRNLFLW-NVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSA 88
D IP+R+ + N ++ YA G ++ + G++ D+ T LKAC ++
Sbjct: 55 LDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPD 114
Query: 89 IEEGRRIHEDVIRNKWET-DVFVGAALIDMYAKCSCVVNARQVFDKILERD--------- 138
G ++H ++ + +V G +L+DMY KC V +VF+ + +++
Sbjct: 115 RVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLT 174
Query: 139 ------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFEL 174
P+ T +V+SA A AL G+ +H S +
Sbjct: 175 GCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRS 234
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
+V V +L++MYAKCGLV+ A+++F + + +VSWN ++ G ++ +AL LF + +
Sbjct: 235 SVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESR 294
Query: 235 DEV-QPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGR 292
+ + T+ V+ C+ R +++ +H+ +V T + D G
Sbjct: 295 ATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVM--TALADAYSKCGE 352
Query: 293 LDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
L +A ++ + W A+++ C +G + LA + ++ E
Sbjct: 353 LADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE 397
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/558 (41%), Positives = 331/558 (59%), Gaps = 50/558 (8%)
Query: 3 FGFHPVL--ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
FGF L ++ L+ +YS C L NA LFD IP+RN+ W LI Y N A+ +
Sbjct: 111 FGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMV 170
Query: 61 YYRLL---------EIGLVPDNFTFPFALKACSALS--AIEEGRRIHEDVIRNKWETDVF 109
+ L E+G D+ L ACS +S A+ EG +H I+ + +
Sbjct: 171 FKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEG--VHGVAIKVGLDKVMG 228
Query: 110 VGAALIDMYAKCSCVVNARQVFDKILERDP------------------------------ 139
V L+D YAKC V +R+VFD + E+D
Sbjct: 229 VENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAG 288
Query: 140 ----SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
+E TL T++ A A AL G LH + + NV + T+++DMY KCG ++A
Sbjct: 289 GGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMA 348
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRG 254
RN F+ ++EK V SW AMI GY MHG + +ALD+F +M V+P++ITF+ VL+ACS
Sbjct: 349 RNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHA 408
Query: 255 GLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGA 314
G +EG +F +M +Y+++P V+HY CMVDLLG +G + EA +LI M+V+ D +WG+
Sbjct: 409 GFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGS 468
Query: 315 LLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
LL +C++H V+LAE++ +L +L+P + G YV+L+NIYA A W+ V ++R L+ DRG+
Sbjct: 469 LLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGL 528
Query: 375 KKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVEN 434
K S +E+K + H FL GD HP ++IY L+ L +++EAGYVP SV HDV+
Sbjct: 529 VKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYVPNMASVLHDVDE 588
Query: 435 DEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRD 494
+EK ++ HSE+LA+AFG++N+ G+ + + KNL++C DCH IK ISKI REI VRD
Sbjct: 589 EEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCHTVIKLISKIVSREIIVRD 648
Query: 495 VNRYHHFKDGICSCGDYW 512
R+HHFKDG+CSCGDYW
Sbjct: 649 AKRFHHFKDGLCSCGDYW 666
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 171/349 (48%), Gaps = 47/349 (13%)
Query: 25 NAHQLFDRIPQR-NLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKAC 83
N LF++ R +++ WN LI A G ++ + + ++ + P+ TFP A+K+C
Sbjct: 33 NLTTLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSC 92
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER------ 137
SAL + G++ H+ + +E+D+FV +ALIDMY+KC + NAR +FD+I R
Sbjct: 93 SALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWT 152
Query: 138 ----------DPSEATLV--------------------------TVISASADIAALPQGR 161
D EA +V +V+SA + ++
Sbjct: 153 SLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSE 212
Query: 162 ELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHG 221
+HG + + + + V+ L+D YAKCG V ++R +F+ + EK VVSWN+MI YA +G
Sbjct: 213 GVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNG 272
Query: 222 HSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQH 279
ST A ++F M + + +T +L AC+ G G + +++ +++ +V
Sbjct: 273 LSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVN-NVIM 331
Query: 280 YTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
T ++D+ G+ + A + M+ K + W A++ +HG + A
Sbjct: 332 ATSIIDMYCKCGQAEMARNAFDGMKEK-NVRSWTAMIAGYGMHGFAREA 379
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG+ + ++AT ++ +Y C A FD + ++N+ W +I Y +G A+++
Sbjct: 323 MGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDV 382
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRR 94
+Y+++ G+ P+ TF L ACS +EEG R
Sbjct: 383 FYQMIWAGVKPNYITFISVLAACSHAGFLEEGWR 416
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/574 (37%), Positives = 335/574 (58%), Gaps = 69/574 (12%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++ T+LVH+YS C L+ A ++F+R+ +RN + WN +I Y NG + A+ L+ ++
Sbjct: 515 IVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLN 574
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC------ 121
G+ PD F+ L +C +LS ++GR +H ++RN E + + L+DMYAKC
Sbjct: 575 GIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYA 634
Query: 122 -------------------SCVVN------ARQVFDKILERDPS---------------- 140
S VN A+ +FD++ +R+ +
Sbjct: 635 WKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKK 694
Query: 141 -----------------EATLVTVISASADIAALPQGRELHGFSWRHRF-ELNVKVKTAL 182
T+VT+++ + + AL G +LH + F +V ++TAL
Sbjct: 695 ESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETAL 754
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDH 241
VDMY+KCG + AR +F+ + K +VSWNAMI+GY+ HG S +AL L+E+M K + P+
Sbjct: 755 VDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNE 814
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
+TF+ +LSACS GL +EG F SM DY+I+ +HYTCMVDLLG +GRL++A + +
Sbjct: 815 VTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVE 874
Query: 302 QMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEG 361
+M ++P+ WGALL +C++H + + LA ++L EL+P + G YVI+SNIYA A W+
Sbjct: 875 KMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKE 934
Query: 362 VAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGY 421
V +R++M +G+KK SWIE+ ++ F +G +HP +EIY L+ L + K GY
Sbjct: 935 VEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGY 994
Query: 422 VPGTESVFH---DVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIA 478
+P T + D++ +E+ + HSERLA++ GLI+ P + + + KNL+IC DCH A
Sbjct: 995 IPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTA 1054
Query: 479 IKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
KFISKIT R I RD NR+HHF++G CSCGDYW
Sbjct: 1055 TKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 1088
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 194/372 (52%), Gaps = 38/372 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + + LV Y+ + +A D I ++ WN +I Y +E A ++
Sbjct: 205 GLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIF 264
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+L+IG+ PDNFTF AL+ C AL + + G+++H +I ++ D FVG ALIDMYAKC
Sbjct: 265 DRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKC 324
Query: 122 SCVVNARQVFDKILERD--------PSEA-------------------------TLVTVI 148
+ +VFD++ ER+ +EA L +++
Sbjct: 325 DDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSIL 384
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
ASA +A + +GRELHG R+ ++ + +ALVDMY+KCG+V+ A +F L E+ V
Sbjct: 385 MASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEV 444
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
S+NA++ GY G + +AL+L+ M+ E +QPD TF +L+ C+ ++GR
Sbjct: 445 SYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAH 504
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
++R +I ++ T +V + GRL+ A ++ +M + + W +++ + +G +
Sbjct: 505 LIR-ANITKNIIVETELVHMYSECGRLNYAKEIFNRM-AERNAYSWNSMIEGYQQNGETQ 562
Query: 327 LAELALEKLIEL 338
A L L K ++L
Sbjct: 563 EA-LRLFKQMQL 573
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 202/448 (45%), Gaps = 70/448 (15%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+ +Y+ CD + ++FD + +RN WN +I A A G + A+ L+
Sbjct: 306 GFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLF 365
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+ E G + F L A + L+ I +GR +H ++RN +D+ +G+AL+DMY+KC
Sbjct: 366 LRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKC 425
Query: 122 SCVVNARQVFDKILERD----------------------------------PSEATLVTV 147
V A QVF +LER+ P + T T+
Sbjct: 426 GMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTL 485
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
++ A+ QGR++H R N+ V+T LV MY++CG + A+ +F ++ E+
Sbjct: 486 LTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNA 545
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
SWN+MI GY +G + +AL LF++M+ + ++PD + +LS+C +GR
Sbjct: 546 YSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNF 605
Query: 267 MVR------------------------------DYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+VR D I V MV +SGR ++A
Sbjct: 606 IVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDA 665
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE-PHDAGNYVILSNIYAR 355
+L QM + + +W ++L G K + +++E + +D V + N+ +
Sbjct: 666 KNLFDQMEQR-NTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSS 724
Query: 356 AANWEGVAKLRKLMIDRGIKKSIACSWI 383
E +L L+I +G + CS +
Sbjct: 725 LPALEHGDQLHSLIIKKGF---VNCSVV 749
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 177/379 (46%), Gaps = 44/379 (11%)
Query: 4 GFHP--VLATKLVHLYSACDCLHN---AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAI 58
G++P L TK++ LY+ CL + A +LF+ +P+RNL WN +I AYA Y +
Sbjct: 101 GYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVL 160
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
LY R+ G D FTFP +KAC A+ + R++ V++ ++FVG AL+D Y
Sbjct: 161 RLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGY 220
Query: 119 AK---------------CSCVVN----------------ARQVFDKILERD--PSEATLV 145
A+ + VV A +FD++L+ P T
Sbjct: 221 ARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFA 280
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+ + + + G+++H F+ + V AL+DMYAKC + +F+++ E+
Sbjct: 281 SALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGER 340
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF 264
V+WN++I+ A GH AL LF +M++ + + +L A + +GR
Sbjct: 341 NQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELH 400
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+VR+ ++ + + +VD+ G ++EA + + ++ + + ALL G
Sbjct: 401 GHLVRNL-LNSDIILGSALVDMYSKCGMVEEAHQVFRSL-LERNEVSYNALLAGYVQEGK 458
Query: 325 VKLAELALEKLIELEPHDA 343
AE ALE +++ D
Sbjct: 459 ---AEEALELYHDMQSEDG 474
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 138/333 (41%), Gaps = 45/333 (13%)
Query: 76 FPFA--LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN---ARQV 130
P++ ++ C ++ + G+ IH +I N + D ++ ++ +YA+ C+ + AR++
Sbjct: 72 LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKL 131
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F+++ ER+ + T +VI A + +
Sbjct: 132 FEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDM 191
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
R+L + N+ V ALVD YA+ G + A +++ VV+WNA+I GY
Sbjct: 192 GGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGY 251
Query: 218 AMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDP 275
+A +F++M K V PD+ TF L C D G+ ++ + D
Sbjct: 252 VKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDT 311
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
V + ++D+ +E+C + + + W +++++ GH A + ++
Sbjct: 312 FVGN--ALIDMYAKCDD-EESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRM 368
Query: 336 IELEPHDAGNYVILSNIYARAANWEGVAKLRKL 368
E N L +I +A + K R+L
Sbjct: 369 --QESGYKSNRFNLGSILMASAGLADIGKGREL 399
>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/370 (53%), Positives = 266/370 (71%), Gaps = 1/370 (0%)
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
+ ++ A A +AAL QG+++H + FEL+V V LVDMY KCG ++ A+ +F +L
Sbjct: 1 MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRM 262
E V SWNAMI+G A HG +A+ LFE+M + V+P+ ITFV VLS CS GL DEGR
Sbjct: 61 EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
+F+SM RD+ I P +HY+CMVDL G +G LDEA + I QM V+P+ VWG+LL +C++H
Sbjct: 121 YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVH 180
Query: 323 GHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSW 382
G+++LAE A+E+LIEL P + G YV+LSNIYA A W+ K+RK+M DR +KK CSW
Sbjct: 181 GNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSW 240
Query: 383 IEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMIC 442
IEV+NK H F+ GD+SHP +EIY L+ L +MK AGY+P T V HDVE ++K ++
Sbjct: 241 IEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILG 300
Query: 443 CHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFK 502
HSE+LAIAFG+I+TP GT + + KNL++C DCH A KFIS+I REI +RD +R+HHFK
Sbjct: 301 HHSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFK 360
Query: 503 DGICSCGDYW 512
DG CSCGDYW
Sbjct: 361 DGQCSCGDYW 370
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 121/246 (49%), Gaps = 28/246 (11%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP 139
L+AC++++A+E+G+++H D+I+ +E DV V L+DMY KC + +A++VF K+LE D
Sbjct: 5 LRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPD- 63
Query: 140 SEATLVTVISASADIAALPQ---GRELHGFSWRHRFELNVKV-KTALVDMYAKC---GLV 192
V S +A I+ L Q G+E + + VK + V + + C GLV
Sbjct: 64 -------VASWNAMISGLAQHGCGKEAV-LLFEQMLQTGVKPNQITFVVVLSGCSHAGLV 115
Query: 193 KVARNLFEQLREKRVVS-----WNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGV 247
RN F+ + +S ++ M+ + G +AL+ +M V+P+ + +
Sbjct: 116 DEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMP--VEPNASVWGSL 173
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR--- 304
L AC G + E ++ +P Y + ++ +GR D+A + M+
Sbjct: 174 LGACRVHGNIELAERAVEQLIELTPENPGT--YVLLSNIYAAAGRWDDAGKVRKMMKDRS 231
Query: 305 VKPDPG 310
VK +PG
Sbjct: 232 VKKEPG 237
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF ++ LV +Y C + +A ++F ++ + ++ WN +I A +G + A+ L
Sbjct: 27 IGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPDVASWNAMISGLAQHGCGKEAVLL 86
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYA 119
+ ++L+ G+ P+ TF L CS ++EGR + + R+ + ++D++
Sbjct: 87 FEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFG 146
Query: 120 KCSCVVNARQVFDKI 134
+ C+ A +++
Sbjct: 147 RAGCLDEALNFINQM 161
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/540 (41%), Positives = 323/540 (59%), Gaps = 38/540 (7%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ LV +Y+ L +A ++F+ IP+++L LWN LI + G + ++ L+ R+ + G
Sbjct: 342 IGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEG 401
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ T LK+ ++L AI + ++H + + +D V LID Y KC+C+ A
Sbjct: 402 SDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYAN 461
Query: 129 QVFD-----------------------------------KILERDPSEATLVTVISASAD 153
+VF+ K LE DP L ++++A A
Sbjct: 462 KVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDP--FVLSSLLNACAS 519
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
++A QG+++H + +F +V ALV YAKCG ++ A F L +K VVSW+AM
Sbjct: 520 LSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAM 579
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I G A HGH +ALD+F +M DE + P+HIT VL AC+ GL DE + +F SM +
Sbjct: 580 IGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFG 639
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
ID + +HY+CM+DLLG +G+LD+A +L+ M + + VWGALL + ++H +L +LA
Sbjct: 640 IDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAA 699
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
EKL LEP +G +V+L+N YA A W+ VAK+RKLM D +KK A SW+E+K++ H F
Sbjct: 700 EKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTF 759
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
+ GD SHP +IYAKL+ L M +AGYVP E HDV+ EK ++ HSERLA+AF
Sbjct: 760 IVGDKSHPRARDIYAKLEELGDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAF 819
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LI+TP G + + KNL+IC DCH+A KFISKI REI +RD+NR+HHF DG CSCGDYW
Sbjct: 820 ALISTPAGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFSDGACSCGDYW 879
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 169/381 (44%), Gaps = 70/381 (18%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQ-RNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+A LV +Y + A ++FD + RN WN ++ A+ N A+EL+ ++
Sbjct: 137 VANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWS 196
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ P+ F F + AC+ +E GR++H V+R ++ DVF AL+DMY+K + A
Sbjct: 197 GVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMA 256
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVIS--ASA 152
VF K+ + D P+ TL +++ A A
Sbjct: 257 ALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGA 316
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
A GR++HGF + + + + ALVDMYAK GL+ AR +FE + K ++ WNA
Sbjct: 317 GAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNA 376
Query: 213 MITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSR------------------ 253
+I+G + G ++L LF +M+ E + T VL + +
Sbjct: 377 LISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIG 436
Query: 254 --------GGLFDE----GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
GL D + + + V + H ++ +T M+ L ++A L M
Sbjct: 437 FLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFM 496
Query: 302 QMRVK---PDPGVWGALLNSC 319
+M K PDP V +LLN+C
Sbjct: 497 EMLRKGLEPDPFVLSSLLNAC 517
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 167/389 (42%), Gaps = 46/389 (11%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ YS C +A ++FD P W+ L+ AY+ N A+ + + G+ +
Sbjct: 43 LLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCN 102
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
F P LK C+ + + G ++H + D+FV AL+ MY V AR+VFD
Sbjct: 103 EFALPIVLK-CAPDAGL--GVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFD 159
Query: 133 KILERD-----------------------------------PSEATLVTVISASADIAAL 157
+ RD P+E V++A L
Sbjct: 160 EA-ARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDL 218
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
GR++H R ++ +V ALVDMY+K G + +A +F ++ + VVSWNA I+G
Sbjct: 219 EAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGC 278
Query: 218 AMHGHSTKALDLFEKMKDE-VQPDHITFVGVLS--ACSRGGLFDEGRMFFESMVRDYHID 274
+HGH AL+L +MK + P+ T +L A + G F GR M++ D
Sbjct: 279 VLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKAC-AD 337
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
+VD+ G LD+A + + + D +W AL++ C HG L+L
Sbjct: 338 SDDYIGVALVDMYAKYGLLDDARK-VFEWIPRKDLLLWNALISGCS-HGGCHGESLSLFC 395
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVA 363
+ E D N L+ + A+ E ++
Sbjct: 396 RMRKEGSDI-NRTTLAAVLKSTASLEAIS 423
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/545 (41%), Positives = 321/545 (58%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + LV LY+ C + A+ +F R+ R + W +I YA NG A+ ++
Sbjct: 203 GFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIF 262
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + + PD L+A + + +E G+ IH VI+ E + + +L +YAKC
Sbjct: 263 SEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKC 322
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
V+ AR F+++ P T+ + I
Sbjct: 323 GHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSI 382
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A A I +L R + + F +V V T+L+D YAKCG V +AR +F+++ +K VV
Sbjct: 383 AACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVV 442
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
W+AM+ GY +HG +++ LF M+ V P+ +TFVG+L+AC GL +EG F M
Sbjct: 443 VWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM 502
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
RDY I+P QHY C+VDLLG +G LD A + +M M ++P VWGALL++CK+H HV L
Sbjct: 503 -RDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTL 561
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E A E+L L+P++ G+YV LSN+YA + W+ VAK+R LM ++G+ K + S IE+
Sbjct: 562 GEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEING 621
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K AF +GD +HP EI+ +++ LE R+KEAG+VP TESV HD+ +E +C HSER
Sbjct: 622 KLQAFQAGDKTHPRSKEIFEEVEDLERRLKEAGFVPHTESVLHDLNYEETEETLCNHSER 681
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIA+GLI+TP GT L ITKNL+ CD+CH AIK ISK+ REI VRD R+HHFKDG CS
Sbjct: 682 LAIAYGLISTPPGTTLRITKNLRACDNCHAAIKLISKLVSREIVVRDACRFHHFKDGACS 741
Query: 508 CGDYW 512
CGDYW
Sbjct: 742 CGDYW 746
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 184/358 (51%), Gaps = 38/358 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + L KLV+ S + A +LFD+ P ++FLWN ++R Y+ +G + AIE+Y
Sbjct: 102 GLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMY 161
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+ + PD F+FP LKACSAL A+E GRR+H + R+ +E+DVFV L+ +YAKC
Sbjct: 162 ARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKC 221
Query: 122 SCVVNARQVFDKILER----------------DPSEA-----------------TLVTVI 148
+V A VF ++++R P EA LV+V+
Sbjct: 222 GEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVL 281
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A D+ L G+ +HG + E + +L +YAKCG V VAR F Q+ ++
Sbjct: 282 RAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLI 341
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
WNAMI+GY +G++ +A++LF MK + ++PD IT ++AC++ G + R E +
Sbjct: 342 FWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYI 401
Query: 268 -VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+ ++ D V T ++D G +D A + D VW A++ LHG
Sbjct: 402 SMSEFRNDVIVN--TSLIDTYAKCGSVDMA-RFVFDRIPDKDVVVWSAMMVGYGLHGQ 456
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 135/284 (47%), Gaps = 24/284 (8%)
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
++Y +LL GL F + S + + R++ + + DVF+ A++ Y
Sbjct: 93 QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFP----DPDVFLWNAIVRCY 148
Query: 119 AKCSCVVNARQVFDKILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
++ +A +++ ++ P + V+ A + + AL GR +HG +RH FE +V
Sbjct: 149 SRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDV 208
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KD 235
V+ LV +YAKCG + A +F +L ++ +VSW ++I+GYA +G +AL +F +M K
Sbjct: 209 FVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKT 268
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
V+PD I V VL A + + G+ +++ C DLL L
Sbjct: 269 NVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIK--------MGLECEFDLLISLTSLYA 320
Query: 296 ACDLIMQMRV------KPDPGVWGALLNSCKLHGHVKLAELALE 333
C +M R+ P W A+++ +G+ AE A+E
Sbjct: 321 KCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGY---AEEAIE 361
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/538 (40%), Positives = 333/538 (61%), Gaps = 36/538 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y++ + +A ++FD IP +++ WN +I YA G + A+EL+ +++ +
Sbjct: 158 TALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVR 217
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD T + AC+ ++IE GR++H + + + +++ + ALID+Y KC V A +
Sbjct: 218 PDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGL 277
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F+ + +D P++ T+++++ A A + A+
Sbjct: 278 FEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAI 337
Query: 158 PQGRELHGF-SWRHRFELNVKV-KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
GR +H + + R + N +T+L+DMYAKCG ++ A+ +F+ + + + SWNAMI
Sbjct: 338 EIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIF 397
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+AMHG + A D+F +M K+E++PD ITFVG+LSACS G+ D GR F SM DY I
Sbjct: 398 GFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKIT 457
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY CM+DLLGHSG EA ++I M ++PD +W +LL +CK+HG+V+L E +
Sbjct: 458 PKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQN 517
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
LI++EP + G+YV+LSNIYA A W VAK+R L+ D+G+KK CS IE+ + H F+
Sbjct: 518 LIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFII 577
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD HP EIY L+ +E ++EAG+VP T V ++E + K + HSE+LAIAFGL
Sbjct: 578 GDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGL 637
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I+T GT+L I KNL++C +CH A K ISKI +REI RD R+HHF+DG+CSC DYW
Sbjct: 638 ISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 183/392 (46%), Gaps = 73/392 (18%)
Query: 21 DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
D L A +F+ I + NL +WN + R +A + A+ LY ++ +GL+P+ +TFPF L
Sbjct: 36 DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLL 95
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY---------------------- 118
K+C+ A EG++IH V++ ++ D++V +LI MY
Sbjct: 96 KSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVV 155
Query: 119 ---------AKCSCVVNARQVFDKILERD------------------------------- 138
A + +A+++FD+I +D
Sbjct: 156 SYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTN 215
Query: 139 --PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
P E+T+V+V+SA A A++ GR++H + H F N+K+ AL+D+Y KCG V+ A
Sbjct: 216 VRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETAC 275
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGG 255
LFE L K V+SWN +I GY +AL LF++M + P+ +T + +L AC+ G
Sbjct: 276 GLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLG 335
Query: 256 LFDEGR---MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
+ GR ++ ++ + + H T ++D+ G + EA + + W
Sbjct: 336 AIEIGRWIHVYINKRLKG--VANASSHRTSLIDMYAKCGDI-EAAQQVFDSILNRSLSSW 392
Query: 313 GALLNSCKLHGHVKLAELALEKLI--ELEPHD 342
A++ +HG A ++ E+EP D
Sbjct: 393 NAMIFGFAMHGRANAAFDIFSRMRKNEIEPDD 424
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 148/331 (44%), Gaps = 40/331 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + + L+ LY C + A LF+ + +++ WN LI Y Y+ A+ L+
Sbjct: 250 GFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLF 309
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGA----ALIDM 117
+L G P++ T L AC+ L AIE GR IH V NK V + +LIDM
Sbjct: 310 QEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIH--VYINKRLKGVANASSHRTSLIDM 367
Query: 118 YAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHG--------FSWR 169
YAKC + A+QVFD IL R S A+ G +HG FS
Sbjct: 368 YAKCGDIEAAQQVFDSILNRSLSSWN------------AMIFGFAMHGRANAAFDIFSRM 415
Query: 170 HRFELNVKVKT--ALVDMYAKCGLVKVARNLFEQLREKRVVS-----WNAMITGYAMHGH 222
+ E+ T L+ + G++ + R++F ++E ++ + MI G
Sbjct: 416 RKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGL 475
Query: 223 STKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTC 282
+A ++ M E++PD + + +L AC G + G + +++++ +P Y
Sbjct: 476 FKEAEEMINTM--EMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPG--SYVL 531
Query: 283 MVDLLGHSGRLDEACD---LIMQMRVKPDPG 310
+ ++ +GR +E L+ +K PG
Sbjct: 532 LSNIYATAGRWNEVAKIRALLNDKGMKKVPG 562
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 148/329 (44%), Gaps = 45/329 (13%)
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
++ ++++ GL N+ ++ C LS +G V E ++ + + +A
Sbjct: 6 IHAQMIKTGLHNTNYALSKLIEFC-VLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHA 64
Query: 120 KCSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
S V+A ++ ++ P+ T ++ + A A +G+++HG + ++L++
Sbjct: 65 LSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLY 124
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH--------------- 222
V T+L+ MY + G ++ AR +F+Q + VVS+ A+ITGYA G+
Sbjct: 125 VHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKD 184
Query: 223 ----------------STKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+ +AL+LF E MK V+PD T V V+SAC++ + GR
Sbjct: 185 VVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQ-VH 243
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
S + D+ +++ ++DL G ++ AC L + K D W L+ + H+
Sbjct: 244 SWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYK-DVISWNTLIGG---YTHM 299
Query: 326 KLAELALEKLIEL-----EPHDAGNYVIL 349
L + AL E+ P+D IL
Sbjct: 300 NLYKEALLLFQEMLRSGESPNDVTMLSIL 328
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/540 (40%), Positives = 322/540 (59%), Gaps = 38/540 (7%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y + + +A +LFD IP +++ WN +I Y +G +E A+ + R+ E +
Sbjct: 197 TALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVS 256
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
P+ T L AC L ++E G+ I V + ++ + AL+DMY+KC + AR++
Sbjct: 257 PNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKL 316
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
FD + ++D P++ T + V+ A A + AL
Sbjct: 317 FDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGAL 376
Query: 158 PQGRELHGFSWRHRFEL----NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
G+ +H + ++ NV + T+++ MYAKCG V+VA +F + + + SWNAM
Sbjct: 377 DLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAM 436
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I+G AM+GH+ +AL LFE+M +E QPD ITFVGVLSAC++ G + G +F SM +DY
Sbjct: 437 ISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYG 496
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I P +QHY CM+DLL SG+ DEA L+ M ++PD +WG+LLN+C++HG V+ E
Sbjct: 497 ISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVA 556
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
E+L ELEP ++G YV+LSNIYA A W+ VAK+R + D+G+KK C+ IE+ H F
Sbjct: 557 ERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEF 616
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
L GD HP + I+ L ++ ++E G+VP T V +D++ + K + HSE+LAIAF
Sbjct: 617 LVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAF 676
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
GLI+T G+ + I KNL++C +CH A K ISKI REI RD NR+HHFKDG CSC D W
Sbjct: 677 GLISTKPGSTIRIVKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDRW 736
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 176/400 (44%), Gaps = 73/400 (18%)
Query: 23 LHNAHQLFDRIPQR--NLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
L A LF I + N+F+WN LIRA++ ++ L+ ++L GL P++ TFP
Sbjct: 75 LSYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLF 134
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP- 139
K+C+ A E +++H ++ V +LI MY++ + +AR VFDK RD
Sbjct: 135 KSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAV 194
Query: 140 SEATLVT----------------------VISASADIAALPQG----------------- 160
S L+T V+S +A IA Q
Sbjct: 195 SFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEAD 254
Query: 161 ------------------RELHGFSW-----RHR-FELNVKVKTALVDMYAKCGLVKVAR 196
R L W R R F N+++ ALVDMY+KCG + AR
Sbjct: 255 VSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTAR 314
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGG 255
LF+ + +K V+ WN MI GY +AL LFE M ++ V P+ +TF+ VL AC+ G
Sbjct: 315 KLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLG 374
Query: 256 LFDEGR---MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
D G+ + + ++ +V +T ++ + G ++ A + M + W
Sbjct: 375 ALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSR-SLASW 433
Query: 313 GALLNSCKLHGHVKLAELALEKLIE--LEPHDAGNYVILS 350
A+++ ++GH + A E++I +P D +LS
Sbjct: 434 NAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLS 473
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/541 (41%), Positives = 318/541 (58%), Gaps = 37/541 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++ KL+ LY+ L + ++FDR+ R+L WN +I+AY N AI L+ +
Sbjct: 284 VSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSR 343
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAKCSCVVNA 127
+ PD T S L I R + +R W D+ +G A++ MYAK V +A
Sbjct: 344 IQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSA 403
Query: 128 RQVFDKILERD-----------------------------------PSEATLVTVISASA 152
R VF+ + +D ++ T V+V+ A +
Sbjct: 404 RAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACS 463
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
AL QG +LHG ++ L+V V T+L DMY KCG + A +LF Q+ V WN
Sbjct: 464 QAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNT 523
Query: 213 MITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
+I + HGH KA+ LF++M DE V+PDHITFV +LSACS GL DEG FE M DY
Sbjct: 524 LIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDY 583
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
I PS++HY CMVDL G +G+L+ A + I M ++PD +WGALL++C++HG+V L ++A
Sbjct: 584 GITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIA 643
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHA 391
E L E+EP G +V+LSN+YA A WEGV ++R + +G++K+ S +EV NK
Sbjct: 644 SEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEV 703
Query: 392 FLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIA 451
F +G+ +HP +E+Y +L L ++K GYVP V DVE+DEK +++ HSERLA+A
Sbjct: 704 FYTGNQTHPMYEEMYRELTALHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMA 763
Query: 452 FGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
F LI TP T + I KNL++C DCH KFISKITEREI VRD NR+HHFK+G+CSCGDY
Sbjct: 764 FALITTPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDY 823
Query: 512 W 512
W
Sbjct: 824 W 824
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 200/419 (47%), Gaps = 49/419 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
GF + +A L+HLY + NA LFD +P R++ WN +I Y +G + A+ L
Sbjct: 179 FGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTL 238
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
L + D+ T L AC+ G IH I++ E+++FV LID+YA+
Sbjct: 239 SDGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ + ++VFD++ RD P TL+++
Sbjct: 295 FGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISL 354
Query: 148 ISASADIAALPQGRELHGFSWRHRFEL-NVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
S + + + R + GF+ R + L ++ + A+V MYAK GLV AR +F L K
Sbjct: 355 ASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKD 414
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKD---EVQPDHITFVGVLSACSRGGLFDEGRMF 263
V+SWN +I+GYA +G +++A++++ M++ E+ + T+V VL ACS+ G +G
Sbjct: 415 VISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKL 474
Query: 264 FESMVRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM-RVKPDPGVWGALLNSCKL 321
++++ ++D V T + D+ G GRLD+A L Q+ RV P W L+
Sbjct: 475 HGRLLKNGLYLDVFVG--TSLADMYGKCGRLDDALSLFYQIPRVNSVP--WNTLIACHGF 530
Query: 322 HGHVKLAELALEKLIE--LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
HGH + A + +++++ ++P +LS EG + D GI S+
Sbjct: 531 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSL 589
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 141/278 (50%), Gaps = 34/278 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY-YRLLEI 67
++ KLV+LY + A FD I R+++ WN++I Y G I + +L
Sbjct: 88 ISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSS 147
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
GL PD TFP LKAC ++ +G +IH ++ + DV+V A+LI +Y + VVNA
Sbjct: 148 GLQPDYRTFPSVLKACRNVT---DGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNA 204
Query: 128 RQVFDKILERDPS-----------------------------EATLVTVISASADIAALP 158
R +FD++ RD T+V+++SA +
Sbjct: 205 RILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAMDSVTVVSLLSACTEAGDFN 264
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
+G +H +S +H E + V L+D+YA+ G +K + +F+++ + ++SWN++I Y
Sbjct: 265 RGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYE 324
Query: 219 MHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGG 255
++ +A+ LF++M+ +QPD +T + + S S+ G
Sbjct: 325 LNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLG 362
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 142/323 (43%), Gaps = 45/323 (13%)
Query: 87 SAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD-------- 138
+ ++ + +H ++ + +V + A L+++Y V AR FD I RD
Sbjct: 65 TNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMI 124
Query: 139 --------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
P T +V+ A ++ G ++H + + F
Sbjct: 125 SGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVT---DGNKIHCLALKFGF 181
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
+V V +L+ +Y + G V AR LF+++ + + SWNAMI+GY G++ +AL L +
Sbjct: 182 MWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDG 241
Query: 233 MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGR 292
++ D +T V +LSAC+ G F+ G ++ + ++ + ++DL G
Sbjct: 242 LR---AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYAEFGS 297
Query: 293 LDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE--KLIELEPHDAGNYVILS 350
L + + +M V+ D W +++ + +L+ A L + +L ++P D + L+
Sbjct: 298 LKDCQKVFDRMYVR-DLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQP-DCLTLISLA 355
Query: 351 NIYARAANWEGVAKLRKLMIDRG 373
+I ++ ++ + +G
Sbjct: 356 SILSQLGEIRACRSVQGFTLRKG 378
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 107/241 (44%), Gaps = 23/241 (9%)
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE--K 232
NV + LV++Y G V +AR F+ + + V +WN MI+GY G+S++ + F
Sbjct: 85 NVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFM 144
Query: 233 MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM----VRDYHIDPSVQHYTCMVDLLG 288
+ +QPD+ TF VL AC + D ++ ++ + D ++ S+ H C
Sbjct: 145 LSSGLQPDYRTFPSVLKACRN--VTDGNKIHCLALKFGFMWDVYVAASLIHLYC------ 196
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
G + A L +M + D G W A+++ G+ K A L L L D+ V
Sbjct: 197 RYGAVVNARILFDEMPTR-DMGSWNAMISGYCQSGNAKEA-LTLSD--GLRAMDSVTVVS 252
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAK 408
L + A ++ + I G++ S + V NK + S +C +++ +
Sbjct: 253 LLSACTEAGDFNRGVTIHSYSIKHGLE-----SELFVSNKLIDLYAEFGSLKDCQKVFDR 307
Query: 409 L 409
+
Sbjct: 308 M 308
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/535 (40%), Positives = 316/535 (59%), Gaps = 35/535 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ +YS C L +A +F + R++ + +I YA G A++L+ + E G+ PD
Sbjct: 337 LLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 396
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+T L C+ ++EG+R+HE + N D+FV AL+DMYAKC + A VF
Sbjct: 397 VYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFS 456
Query: 133 KILERD----------------------------------PSEATLVTVISASADIAALP 158
++ +D P E T+ V+ A A ++A
Sbjct: 457 EMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFD 516
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
+GRE+HG+ R+ + + V +LVDMYAKCG + +AR LF+ + K +VSW MI GY
Sbjct: 517 KGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYG 576
Query: 219 MHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
MHG +A+ LF +M+ ++PD I+FV +L ACS GL DEG FF M + I+P+V
Sbjct: 577 MHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTV 636
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+HY C+VD+L +G L +A I M + PD +WGALL C++H VKLAE EK+ E
Sbjct: 637 EHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFE 696
Query: 338 LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDA 397
LEP + G YV+++NIYA A WE V +LRK + RG++K+ CSWIE+K + + F++GD+
Sbjct: 697 LEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDS 756
Query: 398 SHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINT 457
S+P ++I A L+ + RM E GY P T+ D E EK +C HSE+LA+A G+I++
Sbjct: 757 SNPETEKIEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISS 816
Query: 458 PDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
G + +TKNL++C DCH KF+SK+T REI +RD NR+H FKDG CSC +W
Sbjct: 817 GHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 170/339 (50%), Gaps = 35/339 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF L +KL +Y+ C L A ++FD++ WN+L+ A +G + +I L+
Sbjct: 124 GFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLF 183
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+++ G+ D++TF K+ S+L ++ G ++H ++++ + VG +L+ Y K
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKN 243
Query: 122 SCVVNARQVFDKILERDPSE---------------------------------ATLVTVI 148
V +AR+VFD++ ERD AT+V+V
Sbjct: 244 HRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVF 303
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+ AD + GR +H F + F + L+DMY+KCG + A+ +F ++ + VV
Sbjct: 304 AGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVV 363
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
S+ +MI GYA G + +A+ LFE+M++E + PD T VL+ C+R L DEG+ E
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHE-W 422
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK 306
+++ + + ++D+ G + EA + +MRVK
Sbjct: 423 IKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVK 461
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 167/392 (42%), Gaps = 68/392 (17%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + LV Y + +A ++FD + +R++ WN +I Y NG E + ++
Sbjct: 225 GFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVF 284
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++L G+ D T C+ I GR +H ++ + + L+DMY+KC
Sbjct: 285 VQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKC 344
Query: 122 SCVVNARQVFDKILER---------------------------------DPSEATLVTVI 148
+ +A+ VF ++ R P T+ V+
Sbjct: 345 GDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 404
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+ A L +G+ +H + + ++ V AL+DMYAKCG ++ A +F ++R K ++
Sbjct: 405 NCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDII 464
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
SWN +I GY+ + ++ +AL LF + + PD T VL AC+ FD+GR
Sbjct: 465 SWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGY 524
Query: 267 MVR-----DYHIDPS-------------------------VQHYTCMVDLLGHSGRLDEA 296
++R D H+ S + +T M+ G G EA
Sbjct: 525 IMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEA 584
Query: 297 CDLIMQMR---VKPDPGVWGALLNSCKLHGHV 325
L QMR ++PD + +LL +C G V
Sbjct: 585 IALFNQMRQAGIEPDEISFVSLLYACSHSGLV 616
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 138 DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
DP TL +V+ AD +L G+E+ F + F L+ + + L MY CG +K A
Sbjct: 93 DPR--TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASR 150
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGL 256
+F+Q++ ++ + WN ++ A G + ++ LF+KM V+ D TF V + S
Sbjct: 151 VFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 257 FDEGRMFFESMVRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
+ G +++ + SV + L H R+D A + +M + D W ++
Sbjct: 211 VNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNH--RVDSARKVFDEM-TERDVISWNSI 267
Query: 316 LNSCKLHGHVKLAELALEKLIEL 338
+N +G LAE L +++
Sbjct: 268 INGYVSNG---LAEKGLSVFVQM 287
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/537 (41%), Positives = 322/537 (59%), Gaps = 36/537 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++ L+++YS L +A +FD++ R+L WN +I AY N A+ + + G
Sbjct: 259 VSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGG 318
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAKCSCVVNA 127
+ PD T S LS R I VIR +W + DV +G AL++MYAK + A
Sbjct: 319 IRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCA 378
Query: 128 RQVFDKILERD----------------------------------PSEATLVTVISASAD 153
VFD++ +D P++ T V++I A +
Sbjct: 379 HTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSH 438
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+ AL QG ++H ++ L+V V T L+D+Y KCG ++ A +LF ++ V WNA+
Sbjct: 439 VGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAI 498
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I +HG +AL LF+ M E V+ DHITFV +LSACS GL DEG+ F+ M ++Y
Sbjct: 499 IASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYG 558
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I PS++HY CMVDLLG +G L++A +L+ M ++PD +WGALL++CK++G+ +L LA
Sbjct: 559 IKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLAS 618
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
++L+E++ + G YV+LSNIYA WEGV K+R L DRG++K+ S + V +KA F
Sbjct: 619 DRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVF 678
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
+G+ +HP EIY +LK L +MK GYVP V+ D+E DEK ++ HSERLAIAF
Sbjct: 679 YTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAF 738
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
G+I+TP + + I KNL++C DCH A K+IS+I+EREI VRD NR+HHFKDGICSC
Sbjct: 739 GIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGICSCA 795
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 181/361 (50%), Gaps = 42/361 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MGF +A LVHLYS L AH++F +P +++ WN +I + NG A+ +
Sbjct: 150 MGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGV 209
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
R+ G+ D T L C+ + G IH V+++ ++DVFV ALI+MY+K
Sbjct: 210 LNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSK 269
Query: 121 CSCVVNARQVFDKILER----------------DPSEAT--------------LVTVISA 150
+ +A+ VFD++ R DPS A L+TV+S
Sbjct: 270 FGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSL 329
Query: 151 SADIAALPQ---GRELHGFSWRHR-FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ + L R + GF R + +V + ALV+MYAK G + A +F+QL K
Sbjct: 330 TSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKD 389
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKD--EVQPDHITFVGVLSACSRGGLFDEGRMFF 264
+SWN ++TGY +G +++A+D + M++ + P+ T+V ++ A S G +G
Sbjct: 390 TISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIH 449
Query: 265 ESMVRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV-WGALLNSCKLH 322
++++ ++D V TC++DL G GRL++A L + + D V W A++ S +H
Sbjct: 450 AKLIKNSLYLDVFVA--TCLIDLYGKCGRLEDAMSLFYE--IPRDTSVPWNAIIASLGIH 505
Query: 323 G 323
G
Sbjct: 506 G 506
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 165/354 (46%), Gaps = 42/354 (11%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL+TKL++LY + + FD I ++N+F WN +I AY G Y A+ +L +
Sbjct: 55 VLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSM 114
Query: 68 ----GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
L PD +TFP LKAC +L +G+++H V + +E DVFV A+L+ +Y++
Sbjct: 115 CGGGHLRPDFYTFPPILKACVSLV---DGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGV 171
Query: 124 VVNARQVFDK---------------------------ILERDPSEATLVTVISASADIAA 156
+ A +VF +L R E + I+ ++ +
Sbjct: 172 LDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPV 231
Query: 157 LPQ------GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
Q G +H +H + +V V AL++MY+K G ++ A+ +F+Q+ + +VSW
Sbjct: 232 CAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSW 291
Query: 211 NAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
N++I Y + + AL F+ M+ ++PD +T V + S S+ R ++R
Sbjct: 292 NSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIR 351
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+D V +V++ G ++ A + Q+ K D W L+ +G
Sbjct: 352 REWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRK-DTISWNTLVTGYTQNG 404
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMH 220
++LH N+ + T L+++Y G + ++R+ F+ + +K + SWN++I+ Y
Sbjct: 39 KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98
Query: 221 GHSTKALDLFEKM-----KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
G +A++ ++ ++PD TF +L AC L D ++ V +
Sbjct: 99 GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV--SLVDGKKV--HCCVFKMGFED 154
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
V +V L G LD A + + M VK D G W A+++ +G+ A L ++
Sbjct: 155 DVFVAASLVHLYSRYGVLDVAHKVFVDMPVK-DVGSWNAMISGFCQNGNAAGALGVLNRM 213
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/556 (39%), Positives = 322/556 (57%), Gaps = 56/556 (10%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAY-------------AWNG------- 52
L+ +YS C L +A LFD++ +R++ W+ +IRAY +W
Sbjct: 150 LMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIR 209
Query: 53 --PYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFV 110
E L+ R++E + P++ T + +C + A++ G+R+H ++RN + + +
Sbjct: 210 CNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLAL 269
Query: 111 GAALIDMYAKCSCVVNARQVFDKILERD-------------------------------- 138
AL+DMY KC + +AR +FD + +D
Sbjct: 270 ATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGV 329
Query: 139 -PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
P+E T+V+++S A AL G+ H + + E++V +KTAL+DMYAKCG + A+
Sbjct: 330 RPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQR 389
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGL 256
LF + ++ + +WN M+ GY MHG+ KAL LF +M+ V+P+ ITF+G L ACS GL
Sbjct: 390 LFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGL 449
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
EG+ FE M+ D+ + P V+HY CMVDLLG +G LDEA +I M V P+ +WGA+L
Sbjct: 450 VVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAML 509
Query: 317 NSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKK 376
+CK+H + + ELA +L+ LEP + G V++SNIYA A W VA +RK + D GIKK
Sbjct: 510 AACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKK 569
Query: 377 SIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDE 436
S IEV H F GD +HP ++I L + ++KEAGY+P T V H+++ +E
Sbjct: 570 EPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEE 629
Query: 437 KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVN 496
K + HSE+LA+AFGLI+T GT + + KNL+ICDDCH K +SKI +R I VRD N
Sbjct: 630 KETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRN 689
Query: 497 RYHHFKDGICSCGDYW 512
R+HHF++G CSCG YW
Sbjct: 690 RFHHFREGSCSCGGYW 705
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 175/375 (46%), Gaps = 64/375 (17%)
Query: 22 CLHNAHQLFDRIPQRNL-FLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
CL QL I + + V + + Y + Y R L+I + D+F P L
Sbjct: 59 CLDQTQQLHAHITRTHFNHAQQVSFSPFESHPRYALNTYTYMRKLDIEV--DSFIIPSVL 116
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD-P 139
KACS +S G+ IH ++N +DVFV AL+ MY++C +V+AR +FDK+ ERD
Sbjct: 117 KACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVV 176
Query: 140 SEATLV-------------TVISASADIA------------------------------- 155
S +T++ +++S +A IA
Sbjct: 177 SWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITML 236
Query: 156 ----------ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
A+ G+ LH + R+ F +++ + TALVDMY KCG ++ AR +F+ ++ K
Sbjct: 237 SLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNK 296
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF 264
V++W AMI+ YA A LF +M+D V+P+ +T V +LS C+ G D G+ +F
Sbjct: 297 DVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGK-WF 355
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+ + ++ V T ++D+ G + A L + + D W ++ +HG+
Sbjct: 356 HAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSE-AIDRDICTWNVMMAGYGMHGY 414
Query: 325 VKLAELALEKLIELE 339
E AL+ E+E
Sbjct: 415 ---GEKALKLFTEME 426
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/557 (41%), Positives = 330/557 (59%), Gaps = 49/557 (8%)
Query: 3 FGFHPVL--ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
FGF L ++ L+ +YS C L +A LFD IP RN+ W +I Y N + A+ L
Sbjct: 1171 FGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLL 1230
Query: 61 YYRLLEIGL-------VP-DNFTFPFALKACSALSA--IEEGRRIHEDVIRNKWETDVFV 110
+ LE VP D+ L ACS +S I EG +H V++ ++ + V
Sbjct: 1231 FKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG--VHGFVVKKGFDGSIGV 1288
Query: 111 GAALIDMYAKCSCVVNARQVFDKILERDP------------------------------- 139
G L+D YAKC + +++VFD + E+D
Sbjct: 1289 GNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVG 1348
Query: 140 ---SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
+ TL V+ A A AL G+ +H + E NV V T+++DMY KCG V++A+
Sbjct: 1349 VRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAK 1408
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGG 255
F++++EK V SW AM+ GY MHG + +ALD+F KM + V+P++ITFV VL+ACS G
Sbjct: 1409 KTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAG 1468
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
L +EG +F +M Y I+P ++HY CMVDL G +G L+EA +LI +M++KPD VWG+L
Sbjct: 1469 LVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSL 1528
Query: 316 LNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIK 375
L +C++H +V L E+A +KL EL+P + G YV+LSN+YA A W V ++R LM +R +
Sbjct: 1529 LGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLV 1588
Query: 376 KSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVEND 435
K S +E+K + H FL GD HP+ + IY L+ L +++ GYVP SV HDV+ +
Sbjct: 1589 KPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDEE 1648
Query: 436 EKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDV 495
EK ++ HSE+LA+AFG++N+ GT + I KNL++C DCH IK ISK+ R+ VRD
Sbjct: 1649 EKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVVRDS 1708
Query: 496 NRYHHFKDGICSCGDYW 512
R+HHFKDG+CSCGDYW
Sbjct: 1709 KRFHHFKDGVCSCGDYW 1725
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 178/360 (49%), Gaps = 65/360 (18%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G +L KL+HLYS + A LF +I F WN++IRA NG E A+ LY
Sbjct: 54 GLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLY 113
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ G+ D FTFPF +KAC+ +I+ G+ +H +I+ + DVFV LID Y KC
Sbjct: 114 KNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKC 173
Query: 122 -----------------------------SC--VVNARQVFDKILERD------------ 138
SC + AR++FD+I ++
Sbjct: 174 GHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYI 233
Query: 139 ----PSEA-----------------TLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
P EA T+V++I A ++ L GR +H ++ ++ E+ V
Sbjct: 234 RNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVY 293
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-E 236
+ TAL+DMY+KCG +K A +FE + K + +WN+MIT +HG +AL+LF +M+
Sbjct: 294 LGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVN 353
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
V+PD ITF+GVL AC EG +F M + Y I P +HY CM +L S LDEA
Sbjct: 354 VKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 178/374 (47%), Gaps = 51/374 (13%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A + + + N+ WN +I A G A+ + L ++GL+P +FP +K+CSA
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 1154
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEAT-- 143
L + GR H+ +ETD+FV +ALIDMY+KC + +AR +FD+I R+ T
Sbjct: 1155 LCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSM 1214
Query: 144 ---------------------------------------LVTVISASADIAALPQGRELH 164
+V+V+SA + ++ +H
Sbjct: 1215 ITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVH 1274
Query: 165 GFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST 224
GF + F+ ++ V L+D YAKCG V++ +F+ + EK +SWN+MI YA G S
Sbjct: 1275 GFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSG 1334
Query: 225 KALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTC 282
+AL++F M V+ + +T VL AC+ G G+ + +++ ++ +V T
Sbjct: 1335 EALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIK-MDLEYNVCVGTS 1393
Query: 283 MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEP 340
++D+ GR++ A +M+ K + W A++ +HG K A K++ ++P
Sbjct: 1394 IIDMYCKCGRVEMAKKTFDRMKEK-NVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKP 1452
Query: 341 HDAGNYVILSNIYA 354
NY+ ++ A
Sbjct: 1453 ----NYITFVSVLA 1462
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 154/333 (46%), Gaps = 45/333 (13%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+ Y+ C + ++FD + +++ WN +I YA +G A+E++
Sbjct: 1281 GFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVF 1340
Query: 62 YRLLE-IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ +G+ + T L AC+ A+ G+ IH+ VI+ E +V VG ++IDMY K
Sbjct: 1341 HGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCK 1400
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK- 179
C V A++ FD++ E++ T A+ G +HG R + L++ K
Sbjct: 1401 CGRVEMAKKTFDRMKEKNVKSWT------------AMVAGYGMHG---RAKEALDIFYKM 1445
Query: 180 ---------TALVDMYAKC---GLVKVARNLFEQLREKRVVS-----WNAMITGYAMHGH 222
V + A C GLV+ + F ++ K + + M+ + G
Sbjct: 1446 VRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGC 1505
Query: 223 STKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP-SVQHYT 281
+A +L ++MK ++PD + + +L AC D G + + + + +DP + +Y
Sbjct: 1506 LNEAYNLIKRMK--MKPDFVVWGSLLGACRIHKNVDLGEIAAQKL---FELDPDNCGYYV 1560
Query: 282 CMVDLLGHSGRLDEACDLIMQMR----VKPDPG 310
+ +L +GR + + M M+ VKP PG
Sbjct: 1561 LLSNLYADAGRWADVERMRMLMKNRQLVKP-PG 1592
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
M ++ + T ++ +Y C + A + FDR+ ++N+ W ++ Y +G + A+++
Sbjct: 1382 MDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDI 1441
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMY 118
+Y+++ G+ P+ TF L ACS +EEG + +++K++ + + ++D++
Sbjct: 1442 FYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWF-NAMKHKYDIEPGIEHYGCMVDLF 1500
Query: 119 AKCSCVVNARQVFDKI 134
+ C+ A + ++
Sbjct: 1501 GRAGCLNEAYNLIKRM 1516
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/545 (38%), Positives = 321/545 (58%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + LV +Y + + ++F+ R+L WN L+ + N + + ++
Sbjct: 461 GFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIF 520
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++L G P+ +TF L++CS+LS ++ G+++H +++N + + FVG AL+DMYAK
Sbjct: 521 NQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKN 580
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +A +F+++++RD P+E TL + +
Sbjct: 581 RFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSL 640
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
S + IA L GR+LH + + ++ V +ALVDMYAKCG V+ A +F+ L + V
Sbjct: 641 SGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTV 700
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWN +I GY+ HG KAL FE M DE PD +TF+GVLSACS GL +EG+ F S+
Sbjct: 701 SWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSL 760
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ Y I P+++HY CMVD+LG +G+ E I +M++ + +W +L +CK+HG+++
Sbjct: 761 SKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEF 820
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E A KL ELEP NY++LSN++A W+ V +R LM RG+KK CSW+EV
Sbjct: 821 GERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNG 880
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ H FLS D SHP EI+ KL+ L ++ GY P T+ V H+V + EK ++ HSER
Sbjct: 881 QVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSER 940
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+AF L++T + I KNL+IC DCH +K IS+IT +E+ VRD+N +HHFK+G CS
Sbjct: 941 LALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCS 1000
Query: 508 CGDYW 512
C ++W
Sbjct: 1001 CQNFW 1005
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 170/347 (48%), Gaps = 44/347 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L LV++Y+ C + A ++F IP+R++ W LI + G A+ L+ + G
Sbjct: 165 LWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREG 224
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ + FT+ ALKACS +E G+++H + I+ +D+FVG+AL+D+YAKC +V A
Sbjct: 225 VEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAE 284
Query: 129 QVF------------------------DKIL---------ERDPSEATLVTVISASADIA 155
+VF +K+L E + S+ TL TV+ A+
Sbjct: 285 RVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSG 344
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L G+ +H + R EL+ + LVDMY+KCGL A +F ++ + VVSW+A+IT
Sbjct: 345 NLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIIT 404
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF-ESM---VRD 270
G S +A ++F++M+ V P+ T ++SA + D G +++ ES+ V
Sbjct: 405 CLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAAT-----DLGDLYYGESIHACVCK 459
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
Y + +V + G + + C + + D W ALL+
Sbjct: 460 YGFEYDNTVCNALVTMYMKIGSVQDGCR-VFEATTNRDLISWNALLS 505
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 178/394 (45%), Gaps = 44/394 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ + LV LY+ C + A ++F +P++N WN L+ +A G E + L+ R+
Sbjct: 266 VGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSE 325
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ FT LK C+ + G+ +H IR E D F+ L+DMY+KC +A
Sbjct: 326 INFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDAL 385
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+VF +I + D P++ TL +++SA+ D+
Sbjct: 386 KVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLG 445
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L G +H ++ FE + V ALV MY K G V+ +FE + ++SWNA+++
Sbjct: 446 DLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLS 505
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+ + L +F +M E P+ TF+ +L +CS D G+ +V++ +D
Sbjct: 506 GFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKN-SLD 564
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
+ T +VD+ + L++A + I +K D W ++ G E A++
Sbjct: 565 GNDFVGTALVDMYAKNRFLEDA-ETIFNRLIKRDLFAWTVIVAGYAQDGQ---GEKAVKC 620
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKL 368
I+++ + N + A++ G +++ L
Sbjct: 621 FIQMQREG-----VKPNEFTLASSLSGCSRIATL 649
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 131/291 (45%), Gaps = 38/291 (13%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
L+ C++ + EG+ IH VI++ D + +L+++YAKC A +VF +I ERD
Sbjct: 135 LRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDV 194
Query: 139 --------------------------------PSEATLVTVISASADIAALPQGRELHGF 166
+E T T + A + L G+++H
Sbjct: 195 VSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAE 254
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ + ++ V +ALVD+YAKCG + +A +F + ++ VSWNA++ G+A G + K
Sbjct: 255 AIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKV 314
Query: 227 LDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMV 284
L+LF +M E+ T VL C+ G G++ +R +D + C+V
Sbjct: 315 LNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFIS--CCLV 372
Query: 285 DLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
D+ G +A + +++ PD W A++ G + A +++
Sbjct: 373 DMYSKCGLAGDALKVFVRIE-DPDVVSWSAIITCLDQKGQSREAAEVFKRM 422
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/541 (41%), Positives = 332/541 (61%), Gaps = 40/541 (7%)
Query: 11 TKLVH---LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYA-WNGPYEVAIELYYRLLE 66
TKL++ L + +AH LFD+I +++ L+N++ R YA N PY +A L+ LL
Sbjct: 65 TKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPY-LAFSLFGELLC 123
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
GL+PD++TF LKAC++ A+ EG +H ++ ++++ LI+MYA+C+ +
Sbjct: 124 SGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNA 183
Query: 127 ARQVFDKILER---------------------------------DPSEATLVTVISASAD 153
AR VFD++ + +P++ T+++VI + A
Sbjct: 184 ARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCAL 243
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+ AL G+ +H + + F+ VKV TAL+DM+AKCG + A ++FE +R + +W+AM
Sbjct: 244 LGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAM 303
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I +A HG KA+ +FE+MK E V+PD ITF+G+L ACS GL ++GR +F SM + Y
Sbjct: 304 IVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYG 363
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I P ++HY CMVDLLG +G LDEA + + ++ +K P +W LL++C HG+V++A+ +
Sbjct: 364 ITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVI 423
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
E++ EL+ G+YVILSN+YAR WE V LRKLM DRG+ K CS +EV N H F
Sbjct: 424 ERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEF 483
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFH-DVENDEKANMICCHSERLAIA 451
SGD H E+ L L +K GYVP T V+H D+E + K ++ HSE+LA+A
Sbjct: 484 FSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMA 543
Query: 452 FGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
FGL+NTP GT + + KNL+IC DCH A K IS I R+I +RDV R+H F+DG CSCGD+
Sbjct: 544 FGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSCGDF 603
Query: 512 W 512
W
Sbjct: 604 W 604
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 143/319 (44%), Gaps = 20/319 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + L+++Y+ C+ ++ A +FD + Q + +N +I YA + A+ L
Sbjct: 159 LGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSL 218
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ L + P + T + +C+ L A++ G+ IHE V + ++ V V ALIDM+AK
Sbjct: 219 FRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAK 278
Query: 121 CSCVVNARQVFDKILERDPS--EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
C + +A +F+ + RD A +V + + A+ E+ R +
Sbjct: 279 CGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMK----REGVRPDEIT 334
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVS-----WNAMITGYAMHGHSTKALDLFEKM 233
L+ + GLV+ R F + + ++ + M+ GH +A + +K+
Sbjct: 335 FLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKL 394
Query: 234 KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS-VQHYTCMVDLLGHSGR 292
+ + P I + +LSACS G + + E R + +D + Y + +L GR
Sbjct: 395 EIKATP--ILWRTLLSACSTHGNVEMAKRVIE---RIFELDDAHGGDYVILSNLYARVGR 449
Query: 293 LDEACDLIMQMRVKPDPGV 311
++ L M+ D GV
Sbjct: 450 WEDVNHLRKLMK---DRGV 465
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/576 (38%), Positives = 329/576 (57%), Gaps = 65/576 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFL--------------------- 40
GFG + + LV +Y+ +++A + FD +P+RN+ +
Sbjct: 168 GFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLF 227
Query: 41 ----------WNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIE 90
W ++I NG A++++ + G D FTF L AC +L A+
Sbjct: 228 CGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALG 287
Query: 91 EGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER------------- 137
EG++IH VIR + +VFVG+AL+DMY+KC + +A VF ++ ++
Sbjct: 288 EGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYG 347
Query: 138 --------------------DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
+P + TL +VIS+ A++A+L +G + H + +
Sbjct: 348 QNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFIT 407
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDE 236
V AL+ +Y KCG + + LF ++ + VSW A++ GYA G + + + LFE+M
Sbjct: 408 VSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHG 467
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
++PD +TF+GVLSACSR GL ++G +FESM++++ I P V H TC++DLLG +GRL+EA
Sbjct: 468 LKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEA 527
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARA 356
+ I M PD W LL+SC++HG +++ + A + LI LEP + +YV+LS++YA
Sbjct: 528 RNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASK 587
Query: 357 ANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRM 416
W+ VA+LR+ M D+ ++K SWI+ K K H F + D S P +IYA+L+ L +M
Sbjct: 588 GKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKM 647
Query: 417 KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCH 476
E GYVP SV HDVE EK M+ HSE+LAIAFGLI P G + + KNL++C DCH
Sbjct: 648 IEEGYVPDMSSVLHDVEESEKIKMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCH 707
Query: 477 IAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
A KFISKIT+REI VRD R+H FKDG CSCGD+W
Sbjct: 708 NATKFISKITQREILVRDAVRFHLFKDGTCSCGDFW 743
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 155/377 (41%), Gaps = 103/377 (27%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAY-------------------- 48
L+ L+ Y L AH +FD IPQ NLF WN ++ Y
Sbjct: 42 LSNNLITAYYKLGNLAYAHHVFDHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRD 101
Query: 49 --AWN---------GPYEVAIELYYRLL-EIGLVPDNFTFPFALKACSALSAIEEGRRIH 96
+WN G A+ +Y +L + + + TF L CS ++ GR+I+
Sbjct: 102 GVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQIN 161
Query: 97 EDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAA 156
+++ + +DVFVG+ L+DMY K + +A++ FD++ ER
Sbjct: 162 GQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPER------------------- 202
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
NV + ++ +CG+++ ++ LF L+E+ +SW MITG
Sbjct: 203 ------------------NVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITG 244
Query: 217 YAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID- 274
+G +ALD+F +M+ D TF VL+AC EG+ ++R H D
Sbjct: 245 LMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDN 304
Query: 275 -----------------------------PSVQHYTCMVDLLGHSGRLDEACDLIMQMR- 304
+V +T M+ G +G +EA + +M+
Sbjct: 305 VFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQR 364
Query: 305 --VKPDPGVWGALLNSC 319
V+PD G++++SC
Sbjct: 365 NGVEPDDFTLGSVISSC 381
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/576 (37%), Positives = 330/576 (57%), Gaps = 65/576 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLI---------------- 45
GF + + + LV +YS + A ++FD +P++N+ ++N LI
Sbjct: 173 GFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLF 232
Query: 46 ---------------RAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIE 90
+ NG AI+++ + L D +TF L AC + A++
Sbjct: 233 FEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQ 292
Query: 91 EGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------------ 138
EG+++H +IR ++ ++FV +AL+DMY KC + +A VF K+ ++
Sbjct: 293 EGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYG 352
Query: 139 ---------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
P + TL +VIS+ A++A+L +G + H + +
Sbjct: 353 QNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFIT 412
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDE 236
V ALV +Y KCG ++ + LF ++ K V+W A+++GYA G + + + LFE M
Sbjct: 413 VSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHG 472
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
++PD +TF+GVLSACSR GL ++G FESM+ ++ I P HYTCM+DL +GR++EA
Sbjct: 473 LKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEA 532
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARA 356
+ I +M PD W LL+SC+ +G++ + + A E L+EL+PH+ +YV+LS++YA
Sbjct: 533 RNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAK 592
Query: 357 ANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRM 416
WE VA+LRK M D+G++K CSWI+ KN+ H F + D S+P D+IY++L+ L +M
Sbjct: 593 GKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKM 652
Query: 417 KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCH 476
+ GYVP SV HDV + EK M+ HSE+LAIAFGL+ P G + + KNL++C DCH
Sbjct: 653 IKEGYVPDMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCH 712
Query: 477 IAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
A K+ISKIT REI VRD R+H FKDG CSCGD+W
Sbjct: 713 NATKYISKITNREILVRDTARFHLFKDGTCSCGDFW 748
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 170/381 (44%), Gaps = 71/381 (18%)
Query: 6 HPVLAT--KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
HP L + ++ YS + LFD +P+R+ WN LI YA G +++ Y
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131
Query: 64 LL--EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK- 120
+L + + TF L S ++ GR+IH V++ + + VFVG+ L+DMY+K
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191
Query: 121 ------------------------------CSCVVNARQVFDKILERDP----------- 139
C V +++++F ++ ERD
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFT 251
Query: 140 ----------------------SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
+ T +V++A + AL +G+++H + R ++ N+
Sbjct: 252 QNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIF 311
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDE 236
V +ALVDMY KC +K A +F+++ K VVSW AM+ GY +G+S +A+ F M K
Sbjct: 312 VASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG 371
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
++PD T V+S+C+ +EG F + I + +V L G G ++++
Sbjct: 372 IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLIS-FITVSNALVTLYGKCGSIEDS 430
Query: 297 CDLIMQMRVKPDPGVWGALLN 317
L ++ K D W AL++
Sbjct: 431 HRLFNEISFK-DEVTWTALVS 450
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 156/378 (41%), Gaps = 104/378 (27%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAY-------------------- 48
L L+ Y+ + A ++FD++P NL+ WN ++ AY
Sbjct: 46 LLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRD 105
Query: 49 --AWN---------GPYEVAIELYYRLL--EIGLVPDNFTFPFALKACSALSAIEEGRRI 95
+WN G +++ Y +L + + TF L S ++ GR+I
Sbjct: 106 GVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQI 165
Query: 96 HEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIA 155
H V++ + + VFVG+ L+DMY+K + AR+VFD++ E+
Sbjct: 166 HGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEK------------------ 207
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
NV + L+ +CG V+ ++ LF ++RE+ +SW +MIT
Sbjct: 208 -------------------NVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMIT 248
Query: 216 GYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+ +G A+D+F +MK + +Q D TF VL+AC EG+ ++R + D
Sbjct: 249 GFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKD 308
Query: 275 ------------------------------PSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
+V +T M+ G +G +EA M+
Sbjct: 309 NIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQ 368
Query: 305 ---VKPDPGVWGALLNSC 319
++PD G++++SC
Sbjct: 369 KYGIEPDDFTLGSVISSC 386
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 76/193 (39%), Gaps = 40/193 (20%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP 139
LK C + + +H +I+ + F+ LI YAK + A +VFD++ P
Sbjct: 16 LKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPH--P 73
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF 199
+ + T++SA Y+K G V LF
Sbjct: 74 NLYSWNTILSA-----------------------------------YSKLGRVSEMEYLF 98
Query: 200 EQLREKRVVSWNAMITGYAMHG---HSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGL 256
+ + + VSWN++I+GYA G S KA +L K + ITF +L S+ G
Sbjct: 99 DAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGC 158
Query: 257 FDEGRMFFESMVR 269
GR +V+
Sbjct: 159 VKLGRQIHGHVVK 171
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/557 (41%), Positives = 329/557 (59%), Gaps = 49/557 (8%)
Query: 3 FGFHPVL--ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
FGF L ++ L+ +YS C L +A LFD IP RN+ W +I Y N + A+ L
Sbjct: 2044 FGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLL 2103
Query: 61 YYRLLEIGL-VPDNFTFPF-------ALKACSALSA--IEEGRRIHEDVIRNKWETDVFV 110
+ LE V D P L ACS +S I EG +H V++ ++ + V
Sbjct: 2104 FKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG--VHGFVVKKGFDGSIGV 2161
Query: 111 GAALIDMYAKCSCVVNARQVFDKILERDP------------------------------- 139
G L+D YAKC + +++VFD + E+D
Sbjct: 2162 GNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVG 2221
Query: 140 ---SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
+ TL V+ A A AL G+ +H + E NV V T+++DMY KCG V++A+
Sbjct: 2222 VRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAK 2281
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGG 255
F++++EK V SW AM+ GY MHG + +ALD+F KM + V+P++ITFV VL+ACS G
Sbjct: 2282 KTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAG 2341
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
L +EG +F +M Y I+P ++HY CMVDL G +G L+EA +LI +M++KPD VWG+L
Sbjct: 2342 LVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSL 2401
Query: 316 LNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIK 375
L +C++H +V L E+A +KL EL+P + G YV+LSN+YA A W V ++R LM +R +
Sbjct: 2402 LGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLV 2461
Query: 376 KSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVEND 435
K S +E+K + H FL GD HP+ + IY L+ L +++ GYVP SV HDV+ +
Sbjct: 2462 KPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVDEE 2521
Query: 436 EKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDV 495
EK ++ HSE+LA+AFG++N+ GT + I KNL++C DCH IK ISK+ R+ VRD
Sbjct: 2522 EKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVVRDS 2581
Query: 496 NRYHHFKDGICSCGDYW 512
R+HHFKDG+CSCGDYW
Sbjct: 2582 KRFHHFKDGVCSCGDYW 2598
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 178/360 (49%), Gaps = 65/360 (18%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G +L KL+HLYS + A LF +I F WN++IRA NG E A+ LY
Sbjct: 54 GLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLY 113
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ G+ D FTFPF +KAC+ +I+ G+ +H +I+ + DVFV LID Y KC
Sbjct: 114 KNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKC 173
Query: 122 -----------------------------SC--VVNARQVFDKILERD------------ 138
SC + AR++FD+I ++
Sbjct: 174 GHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYI 233
Query: 139 ----PSEA-----------------TLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
P EA T+V++I A ++ L GR +H ++ ++ E+ V
Sbjct: 234 RNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVY 293
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-E 236
+ TAL+DMY+KCG +K A +FE + K + +WN+MIT +HG +AL+LF +M+
Sbjct: 294 LGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVN 353
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
V+PD ITF+GVL AC EG +F M + Y I P +HY CM +L S LDEA
Sbjct: 354 VKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 177/371 (47%), Gaps = 51/371 (13%)
Query: 29 LFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSA 88
+ + + N+ WN +I A G A+ + L ++GL+P +FP +K+CSAL
Sbjct: 1971 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD 2030
Query: 89 IEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEAT----- 143
+ GR H+ +ETD+FV +ALIDMY+KC + +AR +FD+I R+ T
Sbjct: 2031 LVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITG 2090
Query: 144 ------------------------------------LVTVISASADIAALPQGRELHGFS 167
+V+V+SA + ++ +HGF
Sbjct: 2091 YVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFV 2150
Query: 168 WRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKAL 227
+ F+ ++ V L+D YAKCG V++ +F+ + EK +SWN+MI YA G S +AL
Sbjct: 2151 VKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEAL 2210
Query: 228 DLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
++F M V+ + +T VL AC+ G G+ + +++ ++ +V T ++D
Sbjct: 2211 EVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIK-MDLEYNVCVGTSIID 2269
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHDA 343
+ GR++ A +M+ K + W A++ +HG K A K++ ++P
Sbjct: 2270 MYCKCGRVEMAKKTFDRMKEK-NVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKP--- 2325
Query: 344 GNYVILSNIYA 354
NY+ ++ A
Sbjct: 2326 -NYITFVSVLA 2335
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 154/333 (46%), Gaps = 45/333 (13%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+ Y+ C + ++FD + +++ WN +I YA +G A+E++
Sbjct: 2154 GFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVF 2213
Query: 62 YRLLE-IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ +G+ + T L AC+ A+ G+ IH+ VI+ E +V VG ++IDMY K
Sbjct: 2214 HGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCK 2273
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
C V A++ FD++ E++ T A+ G +HG R + L++ K
Sbjct: 2274 CGRVEMAKKTFDRMKEKNVKSWT------------AMVAGYGMHG---RAKEALDIFYKM 2318
Query: 181 ----------ALVDMYAKC---GLVKVARNLFEQLREKRVVS-----WNAMITGYAMHGH 222
V + A C GLV+ + F ++ K + + M+ + G
Sbjct: 2319 VRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGC 2378
Query: 223 STKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP-SVQHYT 281
+A +L ++MK ++PD + + +L AC D G + + + + +DP + +Y
Sbjct: 2379 LNEAYNLIKRMK--MKPDFVVWGSLLGACRIHKNVDLGEIAAQKL---FELDPDNCGYYV 2433
Query: 282 CMVDLLGHSGRLDEACDLIMQMR----VKPDPG 310
+ +L +GR + + M M+ VKP PG
Sbjct: 2434 LLSNLYADAGRWADVERMRMLMKNRQLVKP-PG 2465
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 94/187 (50%), Gaps = 19/187 (10%)
Query: 84 SALSAIEEGRRIHEDVIRNKW------ETDVFVGAALIDMYAKCSCVVNARQVFDKI--L 135
S L + GR H ++ W +++V ++I A+ V A + F + L
Sbjct: 1952 SILFGVPSGREDHSNLA--TWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKL 2009
Query: 136 ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
P+ ++ I + + + L GR H ++ FE ++ V +AL+DMY+KCG +K A
Sbjct: 2010 GLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDA 2069
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE---------VQPDHITFVG 246
R LF+++ + VVSW +MITGY + + AL LF+ +E V D + V
Sbjct: 2070 RALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVS 2129
Query: 247 VLSACSR 253
VLSACSR
Sbjct: 2130 VLSACSR 2136
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
M ++ + T ++ +Y C + A + FDR+ ++N+ W ++ Y +G + A+++
Sbjct: 2255 MDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDI 2314
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMY 118
+Y+++ G+ P+ TF L ACS +EEG + +++K++ + + ++D++
Sbjct: 2315 FYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWF-NAMKHKYDIEPGIEHYGCMVDLF 2373
Query: 119 AKCSCVVNARQVFDKI 134
+ C+ A + ++
Sbjct: 2374 GRAGCLNEAYNLIKRM 2389
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/553 (40%), Positives = 323/553 (58%), Gaps = 66/553 (11%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV-PDNFTFPFALKACS 84
A LF RI + ++F+ N LIRAYA++ A+ Y + E +V PD TFP LKACS
Sbjct: 88 ARFLFYRIRKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACS 147
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA------------------------- 119
+ ++ G IH V + W ++V V L+ MYA
Sbjct: 148 EIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNI 207
Query: 120 ------KCSCVVNARQVFDKILERD---------------------------------PS 140
KC +AR++F+ + +RD P+
Sbjct: 208 MIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPN 267
Query: 141 EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
E+ LV +SA A + A+ QG+ + + R L V++ TAL+DMY+KCG V+ A +F
Sbjct: 268 ESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFH 327
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDE 259
+++EK V++W+AMI G A++G AL+LF +M+ + V+P+ +TF+G+L+ACS L DE
Sbjct: 328 KMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDE 387
Query: 260 GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC 319
G FF SM Y + P+ H+ CMVDL G +G LD+A +I M KP+ +WGALLN+C
Sbjct: 388 GCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNAC 447
Query: 320 KLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIA 379
++HG +L E ++L+EL+P+ G YV+LSNIYA W+ VA+LR++M +R + K+
Sbjct: 448 RIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPG 507
Query: 380 CSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKAN 439
CS+I++ + H F++GD+SHP + IYAKL + +K AGY P T V D++ +EK
Sbjct: 508 CSFIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKET 567
Query: 440 MICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYH 499
+C HSE+LAIAFGLI T GT + ITKNL++C DCH A K ISKI REI VRD R+H
Sbjct: 568 ALCHHSEKLAIAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNREIIVRDRCRFH 627
Query: 500 HFKDGICSCGDYW 512
HF+DG CSC D+W
Sbjct: 628 HFRDGSCSCMDFW 640
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 149/344 (43%), Gaps = 44/344 (12%)
Query: 33 IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFP--FALKACSALSAIE 90
IP L ++R + + +++ + + G+ DNF + A S +I
Sbjct: 27 IPTPQLLCKYPILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIP 86
Query: 91 EGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---PSEATLVTV 147
R + + + D+F+ LI YA ++A + ++ E P T +
Sbjct: 87 YARFLFYRIRK----PDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLL 142
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLV--------------- 192
+ A ++I +L G +H ++ + V V LV MYA CGL+
Sbjct: 143 LKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDG 202
Query: 193 ----------------KVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE 236
K AR +FE + ++ VVSW+ MI GY + L LF+ M E
Sbjct: 203 ASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGE 262
Query: 237 -VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
++P+ V LSAC+ G ++G+ + E + ++ +V+ T ++D+ G ++
Sbjct: 263 KIEPNESVLVNALSACAHLGAMEQGQ-WIERYMERKNVRLTVRLGTALIDMYSKCGSVER 321
Query: 296 ACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
A ++ +M+ K + W A++N ++G K A L L +E++
Sbjct: 322 ALEVFHKMKEK-NVLAWSAMINGLAINGQGKDA-LNLFSQMEMQ 363
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 122/276 (44%), Gaps = 40/276 (14%)
Query: 17 YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTF 76
Y C +A ++F+ +P R++ W+V+I Y ++ + L+ ++ + P+
Sbjct: 212 YLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVL 271
Query: 77 PFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILE 136
AL AC+ L A+E+G+ I + R V +G ALIDMY+KC V A +VF K+ E
Sbjct: 272 VNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKE 331
Query: 137 RD---------------------------------PSEATLVTVISASADIAALPQGRE- 162
++ P+E T + +++A + + +G
Sbjct: 332 KNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSF 391
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK-RVVSWNAMITGYAMHG 221
H + + + N +VD+Y + G++ A+ + + + K W A++ +HG
Sbjct: 392 FHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHG 451
Query: 222 HSTKALDLFEKMKDEVQPDH----ITFVGVLSACSR 253
+ + +++ E+ P+H + + +AC R
Sbjct: 452 DTELGEQVGKRLL-ELDPNHGGRYVLLSNIYAACGR 486
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 15/206 (7%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T L+ +YS C + A ++F ++ ++N+ W+ +I A NG + A+ L+ ++ G
Sbjct: 305 LGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQG 364
Query: 69 LVPDNFTFPFALKACSALSAIEEG-RRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
+ P+ TF L ACS ++EG H + + ++D+Y + + A
Sbjct: 365 VKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQA 424
Query: 128 RQVFDKILERDPSEATLVTVISAS---ADIAALPQ-GRELHGFSWRH--RFELNVKVKTA 181
+ V K + P+ A +++A D Q G+ L H R+ L
Sbjct: 425 QTVI-KSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNHGGRYVL------- 476
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRV 207
L ++YA CG L +RE++V
Sbjct: 477 LSNIYAACGRWDRVAELRRMMRERQV 502
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/524 (41%), Positives = 324/524 (61%), Gaps = 37/524 (7%)
Query: 26 AHQLFDRIPQR-NLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV-PDNFTFPFALKAC 83
AH++F +I + N+F+WN LIR YA G A LY + GLV PD T+PF +KA
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----- 138
+ ++ + G IH VIR+ + + ++V +L+ +YA C V +A +VFDK+ E+D
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 139 -----------PSEA-----------------TLVTVISASADIAALPQGRELHGFSWRH 170
P EA T+V+++SA A I AL G+ +H + +
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
N+ L+D+YA+CG V+ A+ LF+++ +K VSW ++I G A++G +A++LF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 231 EKMK--DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
+ M+ + + P ITFVG+L ACS G+ EG +F M +Y I+P ++H+ CMVDLL
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
+G++ +A + I M ++P+ +W LL +C +HG LAE A ++++LEP+ +G+YV+
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 431
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAK 408
LSN+YA W V K+RK M+ G+KK S +EV N+ H FL GD SHP D IYAK
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 491
Query: 409 LKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKN 468
LK + GR++ GYVP +V+ DVE +EK N + HSE++AIAF LI+TP+ + + + KN
Sbjct: 492 LKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKN 551
Query: 469 LKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L++C DCH+AIK +SK+ REI VRD +R+HHFK+G CSC DYW
Sbjct: 552 LRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 109/261 (41%), Gaps = 43/261 (16%)
Query: 154 IAALPQGRELHGFSWRHRF-----ELNVKVKTALVDMYAKCGLVKVARNLFEQLREK-RV 207
++++ + R++H FS RH EL + LV + + + A +F ++ + V
Sbjct: 27 VSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPM-SYAHKVFSKIEKPINV 85
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
WN +I GYA G+S A L+ +M+ V+PD T+ ++ A + G
Sbjct: 86 FIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHS 145
Query: 266 SMVRD-----YHIDPSVQH-------------------------YTCMVDLLGHSGRLDE 295
++R ++ S+ H + +++ +G+ +E
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 205
Query: 296 ACDLIMQMR---VKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE-PHDAGNYVILSN 351
A L +M +KPD +LL++C G + L + +I++ + + +L +
Sbjct: 206 ALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLD 265
Query: 352 IYARAANWEGVAKLRKLMIDR 372
+YAR E L M+D+
Sbjct: 266 LYARCGRVEEAKTLFDEMVDK 286
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/534 (40%), Positives = 328/534 (61%), Gaps = 36/534 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y++ + +A ++FD IP +++ WN LI YA G Y+ A+EL+ +++ +
Sbjct: 173 TALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVK 232
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD T L AC+ ++IE GR++H + + + +++ + ALID+Y KC V A +
Sbjct: 233 PDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGL 292
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F+ + +D P+E T+++++ A A + A+
Sbjct: 293 FEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAI 352
Query: 158 PQGRELHGFSWRHRFELN--VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
GR +H + + ++ ++T+L+DMYAKCG ++ A+ +F+ + + + SWNAMI
Sbjct: 353 DIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIF 412
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+AMHG + A D+F +M KD ++PD ITFVG+LSACS G+ D GR F SM DY I
Sbjct: 413 GFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKIT 472
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY CM+DLLGHSG EA ++I M + PD +W +LL +CK+HG+V+L E +
Sbjct: 473 PKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQN 532
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
LI++EP ++G+YV+LSNIYA A W VAK R L+ D+G+KK CS IE+ + H F+
Sbjct: 533 LIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFII 592
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD HP EIY L+ +E ++EAG+VP T V ++E + K + HSE+LAIAFGL
Sbjct: 593 GDKLHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGL 652
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
I+T GT+L I KNL++C +CH A K ISKI +REI RD R+HHF DG+CSC
Sbjct: 653 ISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFXDGVCSC 706
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 186/417 (44%), Gaps = 100/417 (23%)
Query: 21 DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
D L A +FD I + NL +WN + R +A + A+ LY ++ +GLVP+++TFPF L
Sbjct: 51 DGLTYAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLL 110
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS------------------ 122
KAC+ A EG++IH V++ + D++V +LI MY K
Sbjct: 111 KACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVV 170
Query: 123 -------------CVVNARQVFDKILERD------------------------------- 138
+ +A+++FD+I +D
Sbjct: 171 SYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTN 230
Query: 139 --PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
P E+T+VTV+SA A A++ GR++H + H F N+K+ AL+D+Y KCG V+ A
Sbjct: 231 VKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETAS 290
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGG 255
LFE L K V+SWN +I GY +AL LF++M + P+ +T + +L AC+ G
Sbjct: 291 GLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLG 350
Query: 256 LFDEGR-------------------------MFFE-------SMVRDYHIDPSVQHYTCM 283
D GR M+ + V D ++ S+ + M
Sbjct: 351 AIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAM 410
Query: 284 VDLLGHSGRLDEACDLIMQMR---VKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+ GR + A D+ +MR ++PD + LL++C G + L + E
Sbjct: 411 IFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTE 467
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 147/331 (44%), Gaps = 40/331 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + + L+ LY C + A LF+ + +++ WN LI Y Y+ A+ L+
Sbjct: 265 GFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLF 324
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR--NKWETDVFVGAALIDMYA 119
+L G P+ T L AC+ L AI+ GR IH + + + +LIDMYA
Sbjct: 325 QEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYA 384
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
KC + A+QVFD +L R S A+ G +HG + F++ +++
Sbjct: 385 KCGDIEAAQQVFDSMLNRSLSSWN------------AMIFGFAMHGRA-NPAFDIFSRMR 431
Query: 180 --------TALVDMYAKC---GLVKVARNLFEQLREKRVVS-----WNAMITGYAMHGHS 223
V + + C G++ + R++F + E ++ + MI G
Sbjct: 432 KDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLF 491
Query: 224 TKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP-SVQHYTC 282
+A ++ M E+ PD + + +L AC G + G F +++++ I+P + Y
Sbjct: 492 KEAEEMINSM--EMDPDGVIWCSLLKACKMHGNVELGESFAQNLIK---IEPKNSGSYVL 546
Query: 283 MVDLLGHSGRLDEACD---LIMQMRVKPDPG 310
+ ++ +GR +E L+ +K PG
Sbjct: 547 LSNIYATAGRWNEVAKRRALLNDKGMKKVPG 577
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 137/307 (44%), Gaps = 40/307 (13%)
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
++ ++++ GL N+ L S LS +G V + E ++ + + +A
Sbjct: 21 IHAKMIKTGLHNTNYALS-KLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGHA 79
Query: 120 KCSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
S V+A ++ ++ P+ T ++ A A A +G+++HG + +L++
Sbjct: 80 LSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLY 139
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH--------------- 222
V T+L+ MY K G + AR +F+Q + VVS+ A+I GYA +G+
Sbjct: 140 VHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKD 199
Query: 223 ----------------STKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+AL+LF E MK V+PD T V VLSAC++ + GR
Sbjct: 200 VVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQ-VH 258
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
S + D+ +++ ++DL G ++ A L + K D W L+ + H+
Sbjct: 259 SWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYK-DVISWNTLIGG---YTHM 314
Query: 326 KLAELAL 332
L + AL
Sbjct: 315 NLYKEAL 321
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/543 (40%), Positives = 323/543 (59%), Gaps = 39/543 (7%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A LV++YS C + A ++F+ + +L WN +I + A + E ++ L+ LL G
Sbjct: 323 VANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEG 382
Query: 69 LVPDNFTFP-----FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
L PD+FT A KAC L +++G++IH I+ +++D+ V + ++DMY KC
Sbjct: 383 LKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGD 442
Query: 124 VVNARQVFDKILERD---------------------------------PSEATLVTVISA 150
+VNA VF+ I D P E T T+I A
Sbjct: 443 MVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKA 502
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
S+ + AL QGR+LH + + V T+LVDMYAKCG ++ A LF+++ + + W
Sbjct: 503 SSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALW 562
Query: 211 NAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
NAM+ G A HG++ +A++LF+ MK ++PD ++F+G+LSACS GL E + SM
Sbjct: 563 NAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPN 622
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
DY I+P ++HY+C+VD LG +G + EA +I M K + ALL +C++ G V+ +
Sbjct: 623 DYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGK 682
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
+L LEP D+ YV+LSNIYA A W+ V RK+M + +KK SWI+VKN
Sbjct: 683 RVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNML 742
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLA 449
H F+ D SHP D IY K++ + ++E GYVP TE V DVE++EK + HSE+LA
Sbjct: 743 HLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLA 802
Query: 450 IAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
IA+GLI+TP T + + KNL++C DCH AIK+ISK+ EREI +RD NR+HHF+DG+CSCG
Sbjct: 803 IAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCG 862
Query: 510 DYW 512
DYW
Sbjct: 863 DYW 865
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 197/422 (46%), Gaps = 47/422 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + ++ LV++YS C + +A LFD + +R++ LWN++++ Y G + A +L
Sbjct: 212 IGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQL 271
Query: 61 YYRLLEIGLVPDNFTFPFALKAC--SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
+ GL PD F+ L C + +E G+++H +++ ++DV V +L++MY
Sbjct: 272 FSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMY 331
Query: 119 AKCSCVVNARQVFDKILERD---------------------------------PSEATLV 145
+K C AR+VF+ + D P TL
Sbjct: 332 SKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLA 391
Query: 146 TVISASADIAA-----LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
++ A+A A L QG+++H + + F+ ++ V + ++DMY KCG + A +F
Sbjct: 392 SITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFN 451
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDE 259
+ V+W +MI+G +G+ +AL ++ +M+ V PD TF ++ A S ++
Sbjct: 452 YISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQ 511
Query: 260 GRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
GR ++++ D DP V T +VD+ G +++A L +M V+ + +W A+L
Sbjct: 512 GRQLHANVIKLDCVSDPFVG--TSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNAMLVG 568
Query: 319 CKLHGHVKLAELALEKLIE--LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKK 376
HG+ + A + + +EP ILS E L + D GI+
Sbjct: 569 LAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEP 628
Query: 377 SI 378
I
Sbjct: 629 EI 630
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 122/496 (24%), Positives = 204/496 (41%), Gaps = 98/496 (19%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAW-----NGPYEVAIELYYR 63
L+ L+ +YS C L +A Q+FD P+R+L WN ++ AYA +G + + L +R
Sbjct: 114 LSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHL-FR 172
Query: 64 LLEIGL-VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
LL L T LK C + +H I+ E DVFV AL+++Y+KC
Sbjct: 173 LLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCG 232
Query: 123 CVVNARQVFDKILERD---------------------------------PSEATLVTVIS 149
+ +AR +FD + ERD P E ++ +++
Sbjct: 233 RMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILN 292
Query: 150 AS--ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
A L G+++HG + + + +V V +LV+MY+K G AR +F ++ +
Sbjct: 293 GCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDL 352
Query: 208 VSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVL-----SACSRGGLFDEGR 261
+SWN+MI+ A ++++LF + + + ++PDH T + AC L D+G+
Sbjct: 353 ISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGK 412
Query: 262 MFFESMVR-----DYHID-------------------------PSVQHYTCMVDLLGHSG 291
++ D H++ P +T M+ +G
Sbjct: 413 QIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNG 472
Query: 292 RLDEACDL---IMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE-PHDAGNYV 347
D+A + + Q RV PD + L+ + ++ +I+L+ D
Sbjct: 473 NEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGT 532
Query: 348 ILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYA 407
L ++YA+ N E +L K M R I W +A L G A H N +E
Sbjct: 533 SLVDMYAKCGNIEDAYRLFKKMNVRNI-----ALW-------NAMLVGLAQHGNAEEAVN 580
Query: 408 KLKWLEGRMKEAGYVP 423
K MK G P
Sbjct: 581 LFK----SMKSHGIEP 592
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P + T LV +Y+ C + +A++LF ++ RN+ LWN ++ A +G E A+ L+ +
Sbjct: 528 PFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKS 587
Query: 67 IGLVPDNFTFPFALKACSALSAIEEG-RRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G+ PD +F L ACS E +H E ++ + L+D + V
Sbjct: 588 HGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQ 647
Query: 126 NARQVFDKILERDPSEAT 143
A DK++E P +A+
Sbjct: 648 EA----DKVIETMPFKAS 661
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/546 (40%), Positives = 313/546 (57%), Gaps = 35/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G H + T L+ LY+ C + A LFDR+ +L +N LI Y+ NG ++EL+
Sbjct: 251 GLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELF 310
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
L+ +GL P + T + S +H V++ + + V AL +Y +
Sbjct: 311 KELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRF 370
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ + +AR+ FD + E+ P+ T+ + +
Sbjct: 371 NDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSAL 430
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A + AL G+ +H + ELNV V TAL+DMY KCG + AR +F+ + K VV
Sbjct: 431 SACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVV 490
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWN MI+GY +HG +AL L++ M D + P TF+ VL ACS GGL EG F SM
Sbjct: 491 SWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSM 550
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM-RVKPDPGVWGALLNSCKLHGHVK 326
DY I P ++H TCMVDLLG +G+L EA +LI + + PG+WGALL +C +H
Sbjct: 551 TSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGD 610
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
LA+LA +KL ELEP + G YV+LSN+Y + A +R+ R + K+ C+ IE+
Sbjct: 611 LAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIG 670
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
++ H F++GD +HP D IY L+ L +M EAGY P TE+ +DVE +EK +M+ HSE
Sbjct: 671 DRPHVFMAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKVHSE 730
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LAIAFGL+NT GT + I KNL++C DCH A K ISK+T+R I VRD +R+HHF+DG+C
Sbjct: 731 KLAIAFGLLNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVC 790
Query: 507 SCGDYW 512
SCGDYW
Sbjct: 791 SCGDYW 796
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 180/415 (43%), Gaps = 45/415 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF +A+ L LY ++A ++FD +P + LWN L+ + + A+E +
Sbjct: 153 GFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGSE----ALEAF 208
Query: 62 YRLLEIGLV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
R+ G V PD+ T L A + ++ GR +H + V LI +YAK
Sbjct: 209 VRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAK 268
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + AR +FD++ D PS +TLV +
Sbjct: 269 CGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVAL 328
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
I + P LH + + N V TAL +Y + + AR F+ + EK +
Sbjct: 329 IPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTM 388
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
SWNAMI+GYA +G + A+ LF++M+ V+P+ +T LSAC++ G G+ +
Sbjct: 389 ESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGK-WVHK 447
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
++ + ++ +V T ++D+ G + EA + M K + W +++ LHG
Sbjct: 448 IIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNK-NVVSWNVMISGYGLHGQGA 506
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANW---EGVAKLRKLMIDRGIKKSI 378
A + +++ H + LS +YA + EG R + D GI I
Sbjct: 507 EALKLYKDMMDAHLHPTSS-TFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGI 560
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/534 (41%), Positives = 309/534 (57%), Gaps = 37/534 (6%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFT 75
+YS A +FD +P RNL WN + +G AI + + L + P+ T
Sbjct: 153 MYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAIT 212
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI- 134
F L AC+ + ++E GR++H ++R+++ DV V LID Y KC +V++ VF +I
Sbjct: 213 FCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIG 272
Query: 135 ---------------------------------LERDPSEATLVTVISASADIAALPQGR 161
E +P++ + +V+SA A++ L GR
Sbjct: 273 SGRRNVVSWCSLLAALVQNHEEERACMVFLQARKEVEPTDFMISSVLSACAELGGLELGR 332
Query: 162 ELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHG 221
+H + + E N+ V +ALVD+Y KCG ++ A +F ++ E+ +V+WNAMI GYA G
Sbjct: 333 SVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLG 392
Query: 222 HSTKALDLFEKMKDE---VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
AL LF++M + ++T V VLSACSR G + G FESM Y I+P +
Sbjct: 393 DVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAE 452
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
HY C+VDLLG SG +D A + I +M + P VWGALL +CK+HG KL ++A EKL EL
Sbjct: 453 HYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLFEL 512
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDAS 398
+P D+GN+V+ SN+ A A WE +RK M D GIKK++ SW+ VKN+ H F + D+
Sbjct: 513 DPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWVAVKNRVHVFQAKDSF 572
Query: 399 HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTP 458
H EI A L L G MK+AGYVP D+E +EKA+ + HSE++A+AFGLI P
Sbjct: 573 HEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKASEVWYHSEKIALAFGLITLP 632
Query: 459 DGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
G + ITKNL+IC DCH AIKFISKI REI VRD NR+H FKDG CSC DYW
Sbjct: 633 RGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFHRFKDGWCSCKDYW 686
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 172/384 (44%), Gaps = 43/384 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L LV++YS D ++A + R + W LI N + A+ + +
Sbjct: 45 LCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRREC 104
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
++P++FTFP KA ++L G+++H ++ DVFVG + DMY+K AR
Sbjct: 105 VLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEAR 164
Query: 129 QVFDKILER---------------------------------DPSEATLVTVISASADIA 155
+FD++ R +P+ T ++A ADI
Sbjct: 165 NMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIV 224
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR--VVSWNAM 213
+L GR+LHGF R R+ +V V L+D Y KCG + + +F ++ R VVSW ++
Sbjct: 225 SLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSL 284
Query: 214 ITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+ + +A +F + + EV+P VLSAC+ G + GR ++ +
Sbjct: 285 LAALVQNHEEERACMVFLQARKEVEPTDFMISSVLSACAELGGLELGRS-VHALALKACV 343
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
+ ++ + +VDL G G ++ A + +M + + W A++ + H+ ++AL
Sbjct: 344 EENIFVGSALVDLYGKCGSIEYAEQVFREMPER-NLVTWNAMIGG---YAHLGDVDMALS 399
Query: 334 KLIELEPHDAG---NYVILSNIYA 354
E+ G +YV L ++ +
Sbjct: 400 LFQEMTSGSCGIALSYVTLVSVLS 423
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL--E 66
+ + LV LY C + A Q+F +P+RNL WN +I YA G ++A+ L+ +
Sbjct: 349 VGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGS 408
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDV 99
G+ T L ACS A+E G +I E +
Sbjct: 409 CGIALSYVTLVSVLSACSRAGAVERGLQIFESM 441
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 160 GRELHGFSWR-HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
GR +H R H L + LV+MY+K L A+ + + VV+W ++I+G
Sbjct: 26 GRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGCV 85
Query: 219 MHGHSTKALDLFEKMKDE-VQPDHITFVGVLSA 250
+ T AL F M+ E V P+ TF V A
Sbjct: 86 HNRRFTSALLHFSNMRRECVLPNDFTFPCVFKA 118
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/540 (41%), Positives = 318/540 (58%), Gaps = 38/540 (7%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ LV +Y+ L +A ++FD + R+L LWN LI + G ++ A ++Y L + G
Sbjct: 247 IGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEG 306
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L + T LK+ ++L A R++H + + D V LID Y KCSC+ +A
Sbjct: 307 LGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAI 366
Query: 129 QVFD-----------------------------------KILERDPSEATLVTVISASAD 153
+VF+ K LE DP L ++++A A
Sbjct: 367 RVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP--FVLSSLLNACAS 424
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
++A QG+++H + +F + ALV YAKCG ++ A F L E+ VVSW+AM
Sbjct: 425 LSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAM 484
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I G A HGH +AL+LF +M DE + P+HIT VL AC+ GL DE + +F SM +
Sbjct: 485 IGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFG 544
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
ID + +HY+CM+DLLG +G+LD+A +L+ M + + VWGALL + ++H +L +LA
Sbjct: 545 IDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAA 604
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
EKL LEP +G +V+L+N YA + W VAK+RKLM D IKK A SW+EVK+K H F
Sbjct: 605 EKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTF 664
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
+ GD SHP EIY+KL L M +AGY+P + HD++ EK ++ HSERLA+AF
Sbjct: 665 IVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAF 724
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L++TP G + + KNL+IC DCH+A KFIS I REI +RD+NR+HHF+DG CSCGDYW
Sbjct: 725 ALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 784
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 166/373 (44%), Gaps = 40/373 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG+ A LV +Y + A +F+++P ++ WN LI NG AIEL
Sbjct: 138 MGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIEL 197
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
++ GLVP+ F LKAC+ A + GR+IH +I+ ++D ++G L+DMYAK
Sbjct: 198 LLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK 257
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ +A +VFD + RD + TL V
Sbjct: 258 NHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAV 317
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ ++A + A R++H + + F + V L+D Y KC + A +FE+ +
Sbjct: 318 LKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDI 377
Query: 208 VSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
++ +MIT + H A+ LF E ++ ++PD +L+AC+ +++G+
Sbjct: 378 IAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAH 437
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGH 324
+++ + + +V G +++A + P+ GV W A++ HGH
Sbjct: 438 LIKRQFMSDAFAG-NALVYTYAKCGSIEDA---ELAFSSLPERGVVSWSAMIGGLAQHGH 493
Query: 325 VKLAELALEKLIE 337
K A ++++
Sbjct: 494 GKRALELFGRMVD 506
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 201/493 (40%), Gaps = 89/493 (18%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRI-PQRNLFLWNVLIRAYAWNGPYEVAIEL 60
GFG +A LV +Y + +A ++FD +RN WN L+ AY N AI++
Sbjct: 37 GFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQV 96
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ G+ P F F + AC+ I+ GR++H V+R +E DVF AL+DMY K
Sbjct: 97 FGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVK 156
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
V A +F+K+ + D P+ L ++
Sbjct: 157 MGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSI 216
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A A A GR++HGF + + + + LVDMYAK + A +F+ + + +
Sbjct: 217 LKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDL 276
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSR----------GGL 256
+ WNA+I+G + G +A +F ++ E + + T VL + + L
Sbjct: 277 ILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHAL 336
Query: 257 FDEGRMFFESMVRDYHIDP--------------------SVQHYTCMVDLLGHSGRLDEA 296
++ F++ V + ID + T M+ L + A
Sbjct: 337 AEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGA 396
Query: 297 CDLIMQMRVK---PDPGVWGALLNSCKLHGHVKLAELALEKLIE---LEPHDAGNYVILS 350
L M+M K PDP V +LLN+C + + LI+ + AGN ++ +
Sbjct: 397 IKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYT 456
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
YA+ + E + +RG+ SW A + G A H +
Sbjct: 457 --YAKCGSIEDAELAFSSLPERGV-----VSW-------SAMIGGLAQHGHGKRALE--- 499
Query: 411 WLEGRMKEAGYVP 423
L GRM + G P
Sbjct: 500 -LFGRMVDEGINP 511
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 148/337 (43%), Gaps = 44/337 (13%)
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ + F P LK + + G ++H + + +DVFV AL+ MY + +A
Sbjct: 5 GVCCNEFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDA 61
Query: 128 RQVFDKI-LERD---------------------------------PSEATLVTVISASAD 153
R+VFD+ ER+ P+E V++A
Sbjct: 62 RRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTG 121
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+ GR++H R +E +V ALVDMY K G V +A +FE++ + VVSWNA+
Sbjct: 122 SRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNAL 181
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I+G ++GH +A++L +MK + P+ +L AC+ G FD GR M++ +
Sbjct: 182 ISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIK-AN 240
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
D +VD+ + LD+A + M + D +W AL++ C H + A
Sbjct: 241 ADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHR-DLILWNALISGCS---HGGRHDEAF 296
Query: 333 EKLIELEPHDAG-NYVILSNIYARAANWEGVAKLRKL 368
L G N L+ + A+ E + R++
Sbjct: 297 SIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQV 333
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/613 (38%), Positives = 333/613 (54%), Gaps = 102/613 (16%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQR------------------------- 36
G G V+ + L+H+Y D L +A +FD++PQ
Sbjct: 104 GLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELF 163
Query: 37 ----------NLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSAL 86
NL WN +I + +G Y A+ ++ + GL PD + L A L
Sbjct: 164 YQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDL 223
Query: 87 SAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK---------------------CSCVV 125
G +IH VI+ D FV +ALIDMY K C+ +V
Sbjct: 224 DMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALV 283
Query: 126 ----------NARQVFDKILERD-----------------------------------PS 140
NA +VF + D P+
Sbjct: 284 TGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPN 343
Query: 141 EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
T+ ++ A +IAAL G+ H FS R+ +V V +AL+DMYAKCG + +R F+
Sbjct: 344 SVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFD 403
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDE 259
+ + +VSWN+++ GYAMHG + +A+++FE M+ Q PDH++F VLSAC++GGL +E
Sbjct: 404 MMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEE 463
Query: 260 GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC 319
G +F+SM R++ ++ ++HY+CMV LLG SGRL+EA +I QM +PD VWGALL+SC
Sbjct: 464 GWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSC 523
Query: 320 KLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIA 379
++H V L E+A +++ ELEP + GNY++LSNIYA A W V +R +M RG+KK+
Sbjct: 524 RVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPG 583
Query: 380 CSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKAN 439
SWIE+KNK H L+GD+SHP +I KL L MK++GYVP T+ V DVE +K
Sbjct: 584 YSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQ 643
Query: 440 MICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYH 499
++C HSE+LA+ GL+NT G L + KNL+IC DCH IKFIS +REI VRD NR+H
Sbjct: 644 ILCGHSEKLAVVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFH 703
Query: 500 HFKDGICSCGDYW 512
FK G+CSCGDYW
Sbjct: 704 QFKGGVCSCGDYW 716
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 154/356 (43%), Gaps = 61/356 (17%)
Query: 58 IELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDM 117
I ++ +L G+VPD+ P +K C+ALSA++ G+++H + + D V ++L+ M
Sbjct: 59 IRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHM 118
Query: 118 YAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
Y + + +AR VFDK LPQ V
Sbjct: 119 YVQFDHLKDARNVFDK-----------------------LPQP--------------GVV 141
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLR----EKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
+AL+ +A+ G VK + LF Q R E +VSWN MI+G+ G A+ +F+ M
Sbjct: 142 TSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNM 201
Query: 234 KDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE--SMVRDYHIDPSVQHYTCMVDLLGHS 290
E ++PD + VL A G D M + V + P + ++D+ G
Sbjct: 202 HLEGLKPDGTSVSSVLPAV---GDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKC 258
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
E + +M + D G AL+ +G L + ALE + + D N V +
Sbjct: 259 ACASEMSGVFNEMD-EVDVGACNALVTGLSRNG---LVDNALEVFKQFKGMDL-NVVSWT 313
Query: 351 NIYARAA----NWEGVAKLRKLMIDRGIKK---SIACSWIEVKNKAHAFLSGDASH 399
++ A + + E + R++ I+ G+K +I C N A A L G A+H
Sbjct: 314 SMIASCSQNGKDMEALELFREMQIE-GVKPNSVTIPCLLPACGNIA-ALLHGKAAH 367
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 115 IDMYAKCSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
I +++K + + +VF +L + P L TVI A ++AL G+++H F+
Sbjct: 46 IQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGL 105
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
L+ V ++L+ MY + +K ARN+F++L + VV+ +A+I+ +A G + +LF +
Sbjct: 106 GLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQ 165
Query: 233 MKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
+D V+ + +++ G++S +R G + + + F++M H++ T + +L G
Sbjct: 166 TRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNM----HLEGLKPDGTSVSSVLPAVG 221
Query: 292 RLDEA-------CDLIMQMRVKPDPGVWGALLN 317
LD C +I Q + PD V AL++
Sbjct: 222 DLDMPLMGIQIHCYVIKQ-GLGPDKFVVSALID 253
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/538 (40%), Positives = 316/538 (58%), Gaps = 34/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ LV +Y+ L +A ++FD + R+L LWN LI + G ++ A ++Y L + G
Sbjct: 340 IGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEG 399
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L + T LK+ ++L A R++H + + D V LID Y KCSC+ +A
Sbjct: 400 LGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAI 459
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+VF++ D P L ++++A A ++
Sbjct: 460 RVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 519
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
A QG+++H + +F + ALV YAKCG ++ A F L E+ VVSW+AMI
Sbjct: 520 AYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIG 579
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G A HGH +AL+LF +M DE + P+HIT VL AC+ GL DE + +F SM + ID
Sbjct: 580 GLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGID 639
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
+ +HY+CM+DLLG +G+LD+A +L+ M + + VWGALL + ++H +L +LA EK
Sbjct: 640 RTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEK 699
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L LEP +G +V+L+N YA + W VAK+RKLM D IKK A SW+EVK+K H F+
Sbjct: 700 LFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIV 759
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD SHP EIY+KL L M +AGY+P + HD++ EK ++ HSERLA+AF L
Sbjct: 760 GDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFAL 819
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++TP G + + KNL+IC DCH+A KFIS I REI +RD+NR+HHF+DG CSCGDYW
Sbjct: 820 LSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 178/401 (44%), Gaps = 44/401 (10%)
Query: 4 GFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
GF L L+ YS C A ++FD IP W+ L+ AY+ NG AI+ ++
Sbjct: 34 GFLASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHG 93
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
+ G+ + F P LK + + G ++H + + +DVFV AL+ MY
Sbjct: 94 MRAEGVCCNEFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 150
Query: 124 VVNARQVFDKI-LERD---------------------------------PSEATLVTVIS 149
+ +AR+VFD+ ER+ P+E V++
Sbjct: 151 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 210
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A + GR++H R +E +V ALVDMY K G V +A +FE++ + VVS
Sbjct: 211 ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVS 270
Query: 210 WNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WNA+I+G ++GH +A++L +MK + P+ +L AC+ G FD GR M+
Sbjct: 271 WNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMI 330
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ + D +VD+ + LD+A + M + D +W AL++ C H
Sbjct: 331 K-ANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHR-DLILWNALISGCS---HGGRH 385
Query: 329 ELALEKLIELEPHDAG-NYVILSNIYARAANWEGVAKLRKL 368
+ A L G N L+ + A+ E + R++
Sbjct: 386 DEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQV 426
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 166/373 (44%), Gaps = 40/373 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG+ A LV +Y + A +F+++P ++ WN LI NG AIEL
Sbjct: 231 MGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIEL 290
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
++ GLVP+ F LKAC+ A + GR+IH +I+ ++D ++G L+DMYAK
Sbjct: 291 LLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK 350
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ +A +VFD + RD + TL V
Sbjct: 351 NHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAV 410
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ ++A + A R++H + + F + V L+D Y KC + A +FE+ +
Sbjct: 411 LKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDI 470
Query: 208 VSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
++ +MIT + H A+ LF E ++ ++PD +L+AC+ +++G+
Sbjct: 471 IAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAH 530
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGH 324
+++ + + +V G +++A + P+ GV W A++ HGH
Sbjct: 531 LIKRQFMSDAFAG-NALVYTYAKCGSIEDA---ELAFSSLPERGVVSWSAMIGGLAQHGH 586
Query: 325 VKLAELALEKLIE 337
K A ++++
Sbjct: 587 GKRALELFGRMVD 599
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 201/493 (40%), Gaps = 89/493 (18%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRI-PQRNLFLWNVLIRAYAWNGPYEVAIEL 60
GFG +A LV +Y + +A ++FD +RN WN L+ AY N AI++
Sbjct: 130 GFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQV 189
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ G+ P F F + AC+ I+ GR++H V+R +E DVF AL+DMY K
Sbjct: 190 FGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVK 249
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
V A +F+K+ + D P+ L ++
Sbjct: 250 MGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSI 309
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A A A GR++HGF + + + + LVDMYAK + A +F+ + + +
Sbjct: 310 LKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDL 369
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSR----------GGL 256
+ WNA+I+G + G +A +F ++ E + + T VL + + L
Sbjct: 370 ILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHAL 429
Query: 257 FDEGRMFFESMVRDYHIDP--------------------SVQHYTCMVDLLGHSGRLDEA 296
++ F++ V + ID + T M+ L + A
Sbjct: 430 AEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGA 489
Query: 297 CDLIMQMRVK---PDPGVWGALLNSCKLHGHVKLAELALEKLIE---LEPHDAGNYVILS 350
L M+M K PDP V +LLN+C + + LI+ + AGN ++ +
Sbjct: 490 IKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYT 549
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
YA+ + E + +RG+ SW A + G A H +
Sbjct: 550 --YAKCGSIEDAELAFSSLPERGV-----VSW-------SAMIGGLAQHGHGKRALE--- 592
Query: 411 WLEGRMKEAGYVP 423
L GRM + G P
Sbjct: 593 -LFGRMVDEGINP 604
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF 199
S T+ ++ A AL G LH + F ++ L+ Y+KC AR +F
Sbjct: 3 SAGTISQQLTRYAAAQALLPGAHLHANLLKSGFL--ASLRNHLISFYSKCRRPCCARRVF 60
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE 236
+++ + VSW++++T Y+ +G A+ F M+ E
Sbjct: 61 DEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAE 97
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/577 (40%), Positives = 328/577 (56%), Gaps = 68/577 (11%)
Query: 4 GFHPVL--ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF P L +L+ +Y+ CD L ++ +LFD +P+R+L WN+LI YA G + A L+
Sbjct: 100 GFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLF 159
Query: 62 YRLLE----------IGLV----------------------PDNFTFPFALKACSALSAI 89
++ E G V + FT AL A +A+ +
Sbjct: 160 DKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCL 219
Query: 90 EEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----------- 138
G+ IH ++R ++D V +AL DMY KC + AR +FDK+++RD
Sbjct: 220 RIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRY 279
Query: 139 ----------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
P+E T V++A A+ + G+++HG+ R F+
Sbjct: 280 FQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFS 339
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KD 235
+ALV MY+KCG + A +F++ + + SW ++I GYA +G +A+ FE + K
Sbjct: 340 FAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKS 399
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
QPDHITFVGVLSAC+ GL D+G +F S+ Y + + HY C++DLL SG+ DE
Sbjct: 400 GTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDE 459
Query: 296 ACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYAR 355
A ++I +M +KPD +W +LL C++HG++KLA+ A E L E+EP + YV L+NIYA
Sbjct: 460 AENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYAT 519
Query: 356 AANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGR 415
A W VAK+RK M DRG+ K SWI +K H FL GD SHP EI L L R
Sbjct: 520 AGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKR 579
Query: 416 MKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDC 475
MKE G+VP T V HDVE+++K + HSE+LA+AFG+I+TP+GT + + KNL+ C DC
Sbjct: 580 MKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPEGTPIKVFKNLRTCVDC 639
Query: 476 HIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
H AIKFISKIT R+I VRD NR+H F+DG CSC DYW
Sbjct: 640 HTAIKFISKITNRKIIVRDSNRFHFFEDGHCSCRDYW 676
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 126/305 (41%), Gaps = 92/305 (30%)
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
P + +++C +++G+++H+ + + + +F+ L++MYAKC +++++++
Sbjct: 68 PSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKL 127
Query: 131 FDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCG 190
FD++ ERD SW L+ YAK G
Sbjct: 128 FDEMPERDLC--------------------------SW-----------NILISGYAKMG 150
Query: 191 LVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-------------- 236
L++ A++LF+++ E+ SW AMI+GY H +AL+LF MK
Sbjct: 151 LLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSAL 210
Query: 237 -----------------------VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+ D + + + + G +E R F+ MV
Sbjct: 211 AAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMV----- 265
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDL---IMQMRVKPDPGVWGALLNSC----------K 320
D + +T M+D GR E DL +++ ++P+ + +LN+C K
Sbjct: 266 DRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKK 325
Query: 321 LHGHV 325
+HG++
Sbjct: 326 VHGYM 330
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF A+ LVH+YS C + +A ++F PQ +LF W LI YA NG + AI
Sbjct: 333 VGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRY 392
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ L++ G PD+ TF L AC+ +++G
Sbjct: 393 FELLVKSGTQPDHITFVGVLSACAHAGLVDKG 424
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/547 (40%), Positives = 324/547 (59%), Gaps = 40/547 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP-QRNLFLWNVLIRAYAWNGPYEVAIEL 60
GF + T L YS C L +A +F RN+ W +I NG +A+ L
Sbjct: 332 GFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVL 391
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+ E ++P+ FT+ LKA +LS + +IH VI+ ++ VG AL+ Y+K
Sbjct: 392 FSRMREDRVMPNEFTYSAMLKA--SLSILPP--QIHAQVIKTNYQHIPSVGTALLASYSK 447
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+A +F I ++D P+E T+ +V
Sbjct: 448 FGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSV 507
Query: 148 ISASA-DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
I A A A + QGR+ H S ++R+ + V +ALV MY++ G + A+ +FE+ ++
Sbjct: 508 IDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRD 567
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+VSWN+MI+GYA HG+S KA++ F +M+ +Q D +TF+ V+ C+ GL EG+ +F+
Sbjct: 568 LVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFD 627
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
SMVRD+ I+P+++HY CMVDL +G+LDE LI M VW LL +C++H +V
Sbjct: 628 SMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNV 687
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+L + + +KL+ LEPHD+ YV+LSNIYA A W+ ++RKLM R +KK CSWI++
Sbjct: 688 ELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQI 747
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
KNK H+F++ D SHP D+IY KLK + R+K+ GY P T V HD+ D+K M+ HS
Sbjct: 748 KNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHS 807
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
ERLA+AFGLI TP GT L I KNL++C DCH+ +K +S I +REI +RD +R+HHF G
Sbjct: 808 ERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGA 867
Query: 506 CSCGDYW 512
CSCGD+W
Sbjct: 868 CSCGDFW 874
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 178/394 (45%), Gaps = 42/394 (10%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
T LV +Y C + ++F+ +P++N+ W L+ A + + L++R+ G+
Sbjct: 138 GTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGI 197
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
P+ FTF L A ++ A++ G+R+H ++ + VFV +L++MYAKC V +A+
Sbjct: 198 WPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKS 257
Query: 130 VFDKILERD---------------------------------PSEATLVTVISASADIAA 156
VF+ + RD +++T TVI A++
Sbjct: 258 VFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQ 317
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR-VVSWNAMIT 215
L R+LH +H F L V TAL D Y+KCG + A N+F R VVSW A+I+
Sbjct: 318 LALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIIS 377
Query: 216 GYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G +G A+ LF +M+ D V P+ T+ +L A ++ + + +Y
Sbjct: 378 GCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLS---ILPPQIHAQVIKTNYQHI 434
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
PSV T ++ G ++A I +M + D W A+L+ G + A K
Sbjct: 435 PSVG--TALLASYSKFGSTEDALS-IFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNK 491
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKL 368
+ ++ + I S I A A GV + R+
Sbjct: 492 M-AIQGIKPNEFTISSVIDACACPSAGVDQGRQF 524
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 154/345 (44%), Gaps = 39/345 (11%)
Query: 30 FDRIPQRNLFLW-NVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSA 88
D IP+R+ + N ++ YA G ++ + G++ D+ T LKAC ++
Sbjct: 55 LDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPD 114
Query: 89 IEEGRRIHEDVIRNKWET-DVFVGAALIDMYAKCSCVVNARQVFDKILERD--------- 138
G ++H ++ + +V G +L+DMY KC V +VF+ + +++
Sbjct: 115 RVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLT 174
Query: 139 ------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFEL 174
P+ T +V+SA A AL G+ +H S +
Sbjct: 175 GCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRS 234
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
+V V +L++MYAKCGLV+ A+++F + + +VSWN ++ G ++ +AL LF + +
Sbjct: 235 SVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESR 294
Query: 235 DEV-QPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGR 292
+ + T+ V+ C+ R +++ +H+ +V T + D G
Sbjct: 295 ATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVM--TALADAYSKCGE 352
Query: 293 LDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
L +A ++ + W A+++ C +G + LA + ++ E
Sbjct: 353 LADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE 397
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/539 (39%), Positives = 319/539 (59%), Gaps = 35/539 (6%)
Query: 9 LATKLVHLYSACDCLHNA-HQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+ L+ +Y C + A ++FD + + + WN L+ YA N A++LY ++ +
Sbjct: 245 VGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDS 304
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
GL PD FT L ACS + ++ G IH +RN D F+G +L+ +Y C A
Sbjct: 305 GLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAA 364
Query: 128 RQVFDKILER---------------------------------DPSEATLVTVISASADI 154
+ +FD + R P E ++ V A + +
Sbjct: 365 QVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQL 424
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
+AL G+ELH F+ + ++ V ++++DMYAK G + +++ +F++LREK V SWN +I
Sbjct: 425 SALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVII 484
Query: 215 TGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
GY +HG +AL+LFEKM + ++PD TF G+L ACS GL ++G +F M+ ++I
Sbjct: 485 AGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNI 544
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
+P ++HYTC+VD+LG +GR+D+A LI +M PD +W +LL+SC++HG++ L E
Sbjct: 545 EPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVAN 604
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
KL+ELEP NYV++SN++A + W+ V ++R M D G++K CSWIEV K H FL
Sbjct: 605 KLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFL 664
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD P +E+ + LE ++ GY P T SV HD+E ++K ++ HSE+LAI+FG
Sbjct: 665 IGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFG 724
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+NT G + + KNL+IC DCH A KFISK+ R+I VRD R+HHF+DGICSCGDYW
Sbjct: 725 LLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 783
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 182/373 (48%), Gaps = 40/373 (10%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL T+++ +YS C ++ +FD++ ++NLF WN ++ AY N +E A+ ++ L+ +
Sbjct: 142 VLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISV 201
Query: 68 GL-VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
PDNFT P +KAC+ L + G+ IH + +DVFVG ALI MY KC V
Sbjct: 202 TEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEE 261
Query: 127 A-RQVFDKILER---------------------------------DPSEATLVTVISASA 152
A ++VFD + + DP T+ +++ A +
Sbjct: 262 AVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACS 321
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+ +L G E+HGF+ R+ ++ + +L+ +Y CG A+ LF+ + + +VSWN
Sbjct: 322 RMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNV 381
Query: 213 MITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
MI GY+ +G +A++LF +M D +QP I + V ACS+ G+
Sbjct: 382 MIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKE-LHCFALKA 440
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
H+ + + ++D+ G + + + ++R K D W ++ +HG K A
Sbjct: 441 HLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREK-DVASWNVIIAGYGIHGRGKEALEL 499
Query: 332 LEKLIE--LEPHD 342
EK++ L+P D
Sbjct: 500 FEKMLRLGLKPDD 512
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 11/299 (3%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P + L+ LY C A LFD + R+L WNV+I Y+ NG + AI L+
Sbjct: 340 GLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLF 399
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++L G+ P ACS LSA+ G+ +H ++ D+FV +++IDMYAK
Sbjct: 400 RQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKG 459
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
C+ ++++FD++ E+D A+ +I+ + EL R + + T
Sbjct: 460 GCIGLSQRIFDRLREKDV--ASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTG 517
Query: 182 LVDMYAKCGLVKVARNLFEQLR-----EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE 236
++ + GLV+ F Q+ E ++ + ++ G AL L E+M +
Sbjct: 518 ILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGD 577
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
PD + +LS+C G G ++ P ++Y + +L SG+ D+
Sbjct: 578 --PDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKP--ENYVLISNLFAGSGKWDD 632
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 99/211 (46%), Gaps = 37/211 (17%)
Query: 80 LKACSALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYAKCSCVVNARQVFDK----- 133
L+AC IE GRR+HE V ++ D + +I MY+ C ++R VFDK
Sbjct: 112 LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKN 171
Query: 134 -----------------------------ILERDPSEATLVTVISASADIAALPQGRELH 164
+ E P TL VI A A + L G+ +H
Sbjct: 172 LFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIH 231
Query: 165 GFSWRHRFELNVKVKTALVDMYAKCGLVKVA-RNLFEQLREKRVVSWNAMITGYAMHGHS 223
G + + +V V AL+ MY KCGLV+ A + +F+ + K V SWNA++ GYA +
Sbjct: 232 GMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDP 291
Query: 224 TKALDLFEKMKDE-VQPDHITFVGVLSACSR 253
KALDL+ +M D + PD T +L ACSR
Sbjct: 292 RKALDLYLQMTDSGLDPDWFTIGSLLLACSR 322
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 6/193 (3%)
Query: 128 RQVFDKILERDPSEATLVTVISASADIAALPQGRELHGF-SWRHRFELNVKVKTALVDMY 186
R+ D +L+ + ++ A + GR LH S +F + + T ++ MY
Sbjct: 92 RESDDVVLDSAQRSEAMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMY 151
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD--EVQPDHITF 244
+ CG +R +F++LR K + WNA+++ Y + A+ +F ++ E +PD+ T
Sbjct: 152 SMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTL 211
Query: 245 VGVLSACSRGGLFDEG-RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
V+ AC+ GL D G M + V ++ + G G ++EA + +
Sbjct: 212 PCVIKACA--GLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDL 269
Query: 304 RVKPDPGVWGALL 316
W ALL
Sbjct: 270 MDTKTVSSWNALL 282
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/524 (41%), Positives = 323/524 (61%), Gaps = 37/524 (7%)
Query: 26 AHQLFDRIPQR-NLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV-PDNFTFPFALKAC 83
AH++F +I + N+F+WN LIR YA G A+ LY + G V PD T+PF LKA
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAV 131
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----- 138
++ + G IH VIR+ + + ++V +L+ +YA C V +A +VFDK+ E+D
Sbjct: 132 GKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 139 -----------PSEA-----------------TLVTVISASADIAALPQGRELHGFSWRH 170
P EA T+V+++SA A I AL G+ H + +
Sbjct: 192 SVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKV 251
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
N+ L+D+YA+CG V+ A+ LF+++ +K VSW ++I G A++G +A++LF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELF 311
Query: 231 EKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
+ M K+ + P ITFVG+L ACS G+ EG +F M +Y I+P ++H+ CMVDLL
Sbjct: 312 KNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLA 371
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
+G++ +A + I++M ++P+ +W LL +C +HG LAELA K+++LEP+ +G+YV+
Sbjct: 372 RAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVL 431
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAK 408
LSN+YA W V K+RK M+ G++K S +EV N+ H FL GD SHP D IYAK
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAK 491
Query: 409 LKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKN 468
LK + R++ GYVP +V+ DVE +EK N + HSE++AIAF LI+TP+ + + KN
Sbjct: 492 LKEMTDRLRLEGYVPQISNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKN 551
Query: 469 LKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LK+C DCH+AIK +SK+ REI VRD +R+HHFK+G CSC DYW
Sbjct: 552 LKVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/536 (41%), Positives = 312/536 (58%), Gaps = 34/536 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ LYS C LFD+I Q +L +N +I Y +N E A+ L+ LL G
Sbjct: 253 TGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQR 312
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
++ T + + ++ R I ++ V AL +Y + + V ARQ+
Sbjct: 313 VNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQL 372
Query: 131 FDKILERD--------------------------------PSEATLVTVISASADIAALP 158
FD+ E+ P+ T+ +++SA A + AL
Sbjct: 373 FDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALS 432
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
G+ +HG R E NV V TALVDMYAKCG + AR LF+ + +K VV+WNAMITGY
Sbjct: 433 IGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYG 492
Query: 219 MHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
+HGH +AL LF E ++ + P +TF+ +L ACS GL EG F SM +Y P
Sbjct: 493 LHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMS 552
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+HY CMVD+LG +G+L A + I +M ++P P VWGALL +C +H + ++A +A ++L +
Sbjct: 553 EHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQ 612
Query: 338 LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDA 397
L+P + G YV+LSNIY+ N+ A +R+++ R + K+ C+ IE+ ++ + F SGD
Sbjct: 613 LDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDR 672
Query: 398 SHPNCDEIYAKLKWLEGRMKEAGYVPGT-ESVFHDVENDEKANMICCHSERLAIAFGLIN 456
SHP I+ L+ L G+M+EAGY T + HDVE++EK M+ HSE+LAIAFGLI+
Sbjct: 673 SHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLIS 732
Query: 457 TPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
T GT + I KNL++C DCH A KFISKITER I VRD NR+HHFK+GICSCGDYW
Sbjct: 733 TKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 166/360 (46%), Gaps = 35/360 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + + + +V LY A ++FD +P+R+ LWN +I ++ N +E +I ++
Sbjct: 143 GVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVF 202
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+L++GL D+ T L A + L G I + +DV+V LI +Y+KC
Sbjct: 203 VDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKC 262
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
R +FD+I + D + +TLV +I
Sbjct: 263 GKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLI 322
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
L R + S + L V TAL +Y + V+ AR LF++ EK +
Sbjct: 323 PVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLA 382
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
SWNAMI+GY +G + +A+ LF++M ++ P+ +T +LSAC++ G G+ + ++
Sbjct: 383 SWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGK-WVHGLI 441
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ ++ +V T +VD+ G + EA L + V + W A++ LHGH K A
Sbjct: 442 KSERLESNVYVSTALVDMYAKCGSIVEARQL-FDLMVDKNVVTWNAMITGYGLHGHGKEA 500
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 196/433 (45%), Gaps = 70/433 (16%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE-IGL 69
TKL H + + + QLF+++ + +LFL+NVLIR ++ NG + +I LY L + L
Sbjct: 50 TKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNL 109
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
PDNFT+ FA+ A S L G +H I + +++FVG+A++D+Y K + AR+
Sbjct: 110 RPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARK 169
Query: 130 VFDKILERDP---------------------------------SEATLVTVISASADIAA 156
VFD + ERD TL TV++A A++
Sbjct: 170 VFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQE 229
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
G + + + +V V T L+ +Y+KCG R LF+Q+ + ++S+NAMI+G
Sbjct: 230 YRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISG 289
Query: 217 YAMHGHSTKALDLFEKMKDEVQ-----------PDHITF---------------VGVLSA 250
Y + + A+ LF ++ Q P ++ F +G++
Sbjct: 290 YTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQ 349
Query: 251 CSRGGLFDE-----GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM-- 303
S + F + D + S+ + M+ +G D A L +M
Sbjct: 350 PSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP 409
Query: 304 RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYV--ILSNIYARAANWEG 361
++ P+P ++L++C G + + + + LI+ E ++ YV L ++YA+ +
Sbjct: 410 QLSPNPVTVTSILSACAQLGALSIGKW-VHGLIKSERLESNVYVSTALVDMYAKCGSIVE 468
Query: 362 VAKLRKLMIDRGI 374
+L LM+D+ +
Sbjct: 469 ARQLFDLMVDKNV 481
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 134/284 (47%), Gaps = 37/284 (13%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G P ++T L +Y + + A QLFD P+++L WN +I Y NG + AI L
Sbjct: 344 IGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISL 403
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ L P+ T L AC+ L A+ G+ +H + + E++V+V AL+DMYAK
Sbjct: 404 FQEMMP-QLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAK 462
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C +V ARQ+FD +++++ P+ T +++
Sbjct: 463 CGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSI 522
Query: 148 ISASADIAALPQGREL-HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-EK 205
+ A + + +G E+ H + + F+ + +VD+ + G + A E++ E
Sbjct: 523 LYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEP 582
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLS 249
W A++ G M +T+ ++ K ++ P+++ + +LS
Sbjct: 583 GPAVWGALL-GACMIHKNTEMANVASKRLFQLDPENVGYYVLLS 625
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/538 (40%), Positives = 312/538 (57%), Gaps = 35/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ + +H+Y C + +A LFD++ R++ WN +I A A+ L+ ++ G
Sbjct: 561 VGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREG 620
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+PD TF L A A+E + +H + D+ VG AL+ Y+KC V A+
Sbjct: 621 FIPDATTFINILSANVDEEALEWVKEVHSHAT-DAGLVDLRVGNALVHTYSKCGNVKYAK 679
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
QVFD ++ER+ P T V+++SA A
Sbjct: 680 QVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTG 739
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL +E+H + +++V ALV MYAKCG + AR++F+ + E+ V SW MI
Sbjct: 740 ALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIG 799
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G A HG +ALD F KMK E +P+ ++V VL+ACS GL DEGR F SM +DY I+
Sbjct: 800 GLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIE 859
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P+++HYTCMVDLLG +G L+EA I+ M ++PD WGALL +C +G++++AE A ++
Sbjct: 860 PTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKE 919
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
++L+P A YV+LSNIYA WE +R +M +GI+K SWIEV N+ H+F+
Sbjct: 920 RLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVV 979
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD SHP EIYA+L L R+K GYVP T V + + + K +C HSE+LAI +GL
Sbjct: 980 GDTSHPESKEIYAQLNDLIERLKAKGYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVYGL 1039
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++T + + KNL++C DCH A KFISKIT REI RD R+HHFKDG+CSCGDYW
Sbjct: 1040 MHTQSKDPIRVYKNLRVCSDCHTATKFISKITGREIVARDAKRFHHFKDGVCSCGDYW 1097
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 191/407 (46%), Gaps = 86/407 (21%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A KL+ +Y C L A Q+FD++ ++N+++W +I YA G E A+ +Y ++ +
Sbjct: 155 VANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQEC 214
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P+ T+ LKAC ++ G++IH +I++ +++DV V AL++MY KC + +A+
Sbjct: 215 GQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQ 274
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+FDK++ER+ P+ T V++++A+A
Sbjct: 275 LIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAG 334
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL +E+H + L+++V ALV MYAK G + AR +F+ + E+ + SW MI
Sbjct: 335 ALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIG 394
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSAC----------------------- 251
G A HG +A LF +M ++ P+ T++ +L+A
Sbjct: 395 GLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGF 454
Query: 252 --------------SRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
++ G D+ R+ F+ M D V + M+ L +G EA
Sbjct: 455 ISDLRIGNALIHMYAKCGSIDDARLVFDGMC-----DRDVISWNAMMGGLAQNGCGHEAF 509
Query: 298 DLIMQMRVK---PDPGVWGALLNSCKLHGHVKLAELALEKLIELEPH 341
+ +QM+ + PD + +LLN+ HG ALE + E+ H
Sbjct: 510 TVFLQMQQEGLVPDSTTYLSLLNT---HGSTD----ALEWVNEVHKH 549
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 190/434 (43%), Gaps = 82/434 (18%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+H+Y+ C + +A +FD + R++ WN ++ A NG A ++
Sbjct: 453 GFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVF 512
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ + GLVPD+ T+ L + A+E +H+ + +D VG+A I MY +C
Sbjct: 513 LQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRC 572
Query: 122 SCVVNARQVFDKI------------------------------LERD---PSEATLVTVI 148
+ +AR +FDK+ ++R+ P T + ++
Sbjct: 573 GSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINIL 632
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA+ D AL +E+H + ++++V ALV Y+KCG VK A+ +F+ + E+ V
Sbjct: 633 SANVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVT 691
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLF---------- 257
+W MI G A HG A F +M ++ + PD T+V +LSAC+ G
Sbjct: 692 TWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHA 751
Query: 258 -------------------------DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGR 292
D+ R F+ MV + V +T M+ L GR
Sbjct: 752 VSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMV-----ERDVFSWTVMIGGLAQHGR 806
Query: 293 LDEACDLIMQMR---VKPDPGVWGALLNSCKLHGHVKLAE---LALEKLIELEPHDAGNY 346
EA D ++M+ KP+ + A+L +C G V L++ + +EP +Y
Sbjct: 807 GLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEP-TMEHY 865
Query: 347 VILSNIYARAANWE 360
+ ++ RA E
Sbjct: 866 TCMVDLLGRAGLLE 879
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 206/449 (45%), Gaps = 83/449 (18%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + T LV++Y C + +A +FD++ +RN+ W V+I A G + A L+
Sbjct: 249 GFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLF 308
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ G +P+++T+ L A ++ A+E + +H + D+ VG AL+ MYAK
Sbjct: 309 LQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKS 368
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +AR VFD + ERD P+ T ++++
Sbjct: 369 GSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSIL 428
Query: 149 SAS--ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+AS A +AL + +H + F ++++ AL+ MYAKCG + AR +F+ + ++
Sbjct: 429 NASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRD 488
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSA--------------- 250
V+SWNAM+ G A +G +A +F +M+ E + PD T++ +L+
Sbjct: 489 VISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHK 548
Query: 251 -CSRGGL---FDEGRMFFESMVRDYHIDP--------SVQHYTCMVDLLGHSGRL---DE 295
GL F G F +R ID SV+H T ++G + + E
Sbjct: 549 HAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGRE 608
Query: 296 ACDLIMQMRVK---PDPGVWGALLNSCKLHGHVKLAELALEKLIELEPH--DAGNYVI-- 348
A L +QM+ + PD + +L++ + E ALE + E+ H DAG +
Sbjct: 609 ALSLFLQMQREGFIPDATTFINILSA-------NVDEEALEWVKEVHSHATDAGLVDLRV 661
Query: 349 ---LSNIYARAANWEGVAKLRKLMIDRGI 374
L + Y++ N + ++ M++R +
Sbjct: 662 GNALVHTYSKCGNVKYAKQVFDDMVERNV 690
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 151/329 (45%), Gaps = 77/329 (23%)
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
++ G+ D+F++ L+ C I +++H +I++ E +++V L+ +Y +C +
Sbjct: 110 VQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRL 169
Query: 125 VNARQVFDKILERD---------------------------------PSEATLVTVISAS 151
ARQVFDK+L+++ P+E T ++++ A
Sbjct: 170 QCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKAC 229
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
L G+++H + F+ +V+V+TALV+MY KCG ++ A+ +F+++ E+ V+SW
Sbjct: 230 CCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWT 289
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSA-------------------- 250
MI G A +G +A LF +M+ E P+ T+V +L+A
Sbjct: 290 VMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNA 349
Query: 251 ---------------CSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
++ G D+ R+ F+ M + + +T M+ L GR E
Sbjct: 350 GLALDLRVGNALVHMYAKSGSIDDARVVFDGMT-----ERDIFSWTVMIGGLAQHGRGQE 404
Query: 296 ACDLIMQMRVK---PDPGVWGALLNSCKL 321
A L +QM+ P+ + ++LN+ +
Sbjct: 405 AFSLFLQMQRNGCLPNLTTYLSILNASAI 433
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 122/263 (46%), Gaps = 63/263 (23%)
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMH 220
+++H + E N+ V L+ +Y +CG ++ AR +F++L +K + W MI GYA +
Sbjct: 138 KQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEY 197
Query: 221 GHSTKALDLFEKMKDEV-QPDHITFVGVLSACS--------------------------- 252
GH+ A+ +++KM+ E QP+ IT++ +L AC
Sbjct: 198 GHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVE 257
Query: 253 --------RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
+ G ++ ++ F+ MV + +V +T M+ L H GR EA L +QM+
Sbjct: 258 TALVNMYVKCGSIEDAQLIFDKMV-----ERNVISWTVMIGGLAHYGRGQEAFHLFLQMQ 312
Query: 305 VK---PDPGVWGALLNSC----------KLHGHVKLAELALEKLIELEPHDAGNYVILSN 351
+ P+ + ++LN+ ++H H A LAL+ + GN ++ +
Sbjct: 313 REGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRV-------GNALV--H 363
Query: 352 IYARAANWEGVAKLRKLMIDRGI 374
+YA++ + + + M +R I
Sbjct: 364 MYAKSGSIDDARVVFDGMTERDI 386
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/536 (41%), Positives = 312/536 (58%), Gaps = 34/536 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ LYS C LFD+I Q +L +N +I Y +N E A+ L+ LL G
Sbjct: 253 TGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQR 312
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
++ T + + ++ R I ++ V AL +Y + + V ARQ+
Sbjct: 313 VNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQL 372
Query: 131 FDKILERD--------------------------------PSEATLVTVISASADIAALP 158
FD+ E+ P+ T+ +++SA A + AL
Sbjct: 373 FDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALS 432
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
G+ +HG R E NV V TALVDMYAKCG + AR LF+ + +K VV+WNAMITGY
Sbjct: 433 IGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYG 492
Query: 219 MHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
+HGH +AL LF E ++ + P +TF+ +L ACS GL EG F SM +Y P
Sbjct: 493 LHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMS 552
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+HY CMVD+LG +G+L A + I +M ++P P VWGALL +C +H + ++A +A ++L +
Sbjct: 553 EHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQ 612
Query: 338 LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDA 397
L+P + G YV+LSNIY+ N+ A +R+++ R + K+ C+ IE+ ++ + F SGD
Sbjct: 613 LDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDR 672
Query: 398 SHPNCDEIYAKLKWLEGRMKEAGYVPGT-ESVFHDVENDEKANMICCHSERLAIAFGLIN 456
SHP I+ L+ L G+M+EAGY T + HDVE++EK M+ HSE+LAIAFGLI+
Sbjct: 673 SHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLIS 732
Query: 457 TPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
T GT + I KNL++C DCH A KFISKITER I VRD NR+HHFK+GICSCGDYW
Sbjct: 733 TKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 166/360 (46%), Gaps = 35/360 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + + + +V LY A ++FD +P+R+ LWN +I ++ N +E +I ++
Sbjct: 143 GVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVF 202
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+L++GL D+ T L A + L G I + +DV+V LI +Y+KC
Sbjct: 203 VDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKC 262
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
R +FD+I + D + +TLV +I
Sbjct: 263 GKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLI 322
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
L R + S + L V TAL +Y + V+ AR LF++ EK +
Sbjct: 323 PVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLA 382
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
SWNAMI+GY +G + +A+ LF++M ++ P+ +T +LSAC++ G G+ + ++
Sbjct: 383 SWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGK-WVHGLI 441
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ ++ +V T +VD+ G + EA L + V + W A++ LHGH K A
Sbjct: 442 KSERLESNVYVSTALVDMYAKCGSIVEARQL-FDLMVDKNVVTWNAMITGYGLHGHGKEA 500
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 196/433 (45%), Gaps = 70/433 (16%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE-IGL 69
TKL H + + + QLF+++ + +LFL+NVLIR ++ NG + +I LY L + L
Sbjct: 50 TKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNL 109
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
PDNFT+ FA+ A S L G +H I + +++FVG+A++D+Y K + AR+
Sbjct: 110 RPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARK 169
Query: 130 VFDKILERDP---------------------------------SEATLVTVISASADIAA 156
VFD + ERD TL TV++A A++
Sbjct: 170 VFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQE 229
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
G + + + +V V T L+ +Y+KCG R LF+Q+ + ++S+NAMI+G
Sbjct: 230 YRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISG 289
Query: 217 YAMHGHSTKALDLFEKMKDEVQ-----------PDHITF---------------VGVLSA 250
Y + + A+ LF ++ Q P ++ F +G++
Sbjct: 290 YTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQ 349
Query: 251 CSRGGLFDE-----GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM-- 303
S + F + D + S+ + M+ +G D A L +M
Sbjct: 350 PSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMP 409
Query: 304 RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYV--ILSNIYARAANWEG 361
++ P+P ++L++C G + + + + LI+ E ++ YV L ++YA+ +
Sbjct: 410 QLSPNPVTVTSILSACAQLGALSIGKW-VHGLIKSERLESNVYVSTALVDMYAKCGSIVE 468
Query: 362 VAKLRKLMIDRGI 374
+L LM+D+ +
Sbjct: 469 ARQLFDLMVDKNV 481
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 134/284 (47%), Gaps = 37/284 (13%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G P ++T L +Y + + A QLFD P+++L WN +I Y NG + AI L
Sbjct: 344 IGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISL 403
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ L P+ T L AC+ L A+ G+ +H + + E++V+V AL+DMYAK
Sbjct: 404 FQEMMP-QLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAK 462
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C +V ARQ+FD +++++ P+ T +++
Sbjct: 463 CGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSI 522
Query: 148 ISASADIAALPQGREL-HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-EK 205
+ A + + +G E+ H + + F+ + +VD+ + G + A E++ E
Sbjct: 523 LYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEP 582
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLS 249
W A++ G M +T+ ++ K ++ P+++ + +LS
Sbjct: 583 GPAVWGALL-GACMIHKNTEMANVASKRLFQLDPENVGYYVLLS 625
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/515 (40%), Positives = 319/515 (61%), Gaps = 6/515 (1%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G F+ + L+ +Y C CL A ++FD + +++ WN ++ YA N ++ A+E+
Sbjct: 148 VGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEI 207
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + G PD T + A + S+ E E + N ++ +I +Y K
Sbjct: 208 CREMEDYGQKPDGCTMASLMPAVANTSS--ENVLYVEKIFVNLERKNLISWNVMIRVYMK 265
Query: 121 CSCVVNARQVFDKI--LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
S A ++ ++ +P T +V+ A D++AL GR +H + + + N+ +
Sbjct: 266 NSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLL 325
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ 238
+ +L+DMYA+CG + A+ +F++++ + V SW ++I+ Y M G A+ LF +M + Q
Sbjct: 326 ENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQ 385
Query: 239 -PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
PD I FV +LSACS GL DEGR++F+ M DY I P ++HY C+VDLLG +GR+DEA
Sbjct: 386 APDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAY 445
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAA 357
++I QM ++P+ VW LL+SC++ ++ + LA + L++L P +G YV+LSNIYA+A
Sbjct: 446 NIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAG 505
Query: 358 NWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK 417
W+ V ++R +M + I+K+ S +E+ N+ H FL+GD SHP EIY +L L +MK
Sbjct: 506 RWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMK 565
Query: 418 EAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHI 477
E GYVP T+S HDVE ++K + HSE+LAI F L+NT + ++ ITKNL++C DCHI
Sbjct: 566 ELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTQE-YQIRITKNLRVCGDCHI 624
Query: 478 AIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
A K ISKI EREI VRD NR+HHFKDG+CSCGDYW
Sbjct: 625 AAKLISKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 166/330 (50%), Gaps = 23/330 (6%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
+P L KL+ Y+AC ++FD + RN+ +NV+IR+Y N Y+ + ++ ++
Sbjct: 52 NPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMV 111
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G PDN+T+P LKACS + G IH DV++ + ++FVG LI MY KC C+
Sbjct: 112 NGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLF 171
Query: 126 NARQVFDKILERDPSEATLVTVISASADIA----------ALPQGRELHGFSWRHRFELN 175
AR+VFD+++ +D V+S ++ +A AL RE+ + +
Sbjct: 172 EARRVFDEMIWKD--------VVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTM 223
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-K 234
+ A+ + ++ V +F L K ++SWN MI Y + T+A+DL+ +M K
Sbjct: 224 ASLMPAVANTSSEN--VLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEK 281
Query: 235 DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLD 294
V+PD ITF VL AC GR E V + P++ ++D+ G LD
Sbjct: 282 CRVEPDAITFASVLPACGDLSALLLGRRIHE-YVEKKKLCPNLLLENSLIDMYARCGCLD 340
Query: 295 EACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+A + +M+ + D W +L+++ + G
Sbjct: 341 DAKRVFDRMKFR-DVASWTSLISAYGMTGQ 369
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 83/211 (39%), Gaps = 37/211 (17%)
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF 199
S L + + DI L ++LH + N + L+ YA CG + R +F
Sbjct: 20 SFGLLAKALDQNPDIKTL---KKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVF 76
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACS-----R 253
+++ ++ VV +N MI Y + L +F +M + +PD+ T+ VL ACS R
Sbjct: 77 DEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLR 136
Query: 254 GGLFDEGR-------------------------MFFESMVRDYHIDPSVQHYTCMVDLLG 288
GL G +F V D I V + MV
Sbjct: 137 YGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYA 196
Query: 289 HSGRLDEACDLIMQMR---VKPDPGVWGALL 316
H+ R D+A ++ +M KPD +L+
Sbjct: 197 HNMRFDDALEICREMEDYGQKPDGCTMASLM 227
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/537 (40%), Positives = 315/537 (58%), Gaps = 34/537 (6%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
T L+ +Y+ C L A QLF+ + Q+ + W +I + E +L+ R+ E +
Sbjct: 235 TTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENI 294
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
P+ T + C A++ G+++H ++RN + + + AL+DMY KCS + NAR
Sbjct: 295 FPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARA 354
Query: 130 VFDKILERD---------------------------------PSEATLVTVISASADIAA 156
+FD RD P++ T+V+++S A A
Sbjct: 355 LFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGA 414
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
L G+ +H + + R E++ + TALVDMYAKCG + A LF + + + WNA+ITG
Sbjct: 415 LDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITG 474
Query: 217 YAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
+AMHG+ +ALD+F +M+ + V+P+ ITF+G+L ACS GL EG+ FE MV + + P
Sbjct: 475 FAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVP 534
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
++HY CMVDLLG +G LDEA ++I M +KP+ VWGAL+ +C+LH + +L ELA +L
Sbjct: 535 QIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQL 594
Query: 336 IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG 395
+E+EP + G V++SNIYA A W A +RK M G+KK S IEV H FL G
Sbjct: 595 LEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMG 654
Query: 396 DASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLI 455
D SHP I L + ++ EAGYVP T +V +++ +EK + HSE+LA+AFGLI
Sbjct: 655 DQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLI 714
Query: 456 NTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+T T + I KNL++C+DCH A K +SKI R I VRD NR+HHF++G CSCGDYW
Sbjct: 715 STAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 771
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 179/367 (48%), Gaps = 41/367 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ +Y C C+ A +FD++ +R++ W+ +IR+ + N +++A+EL + +
Sbjct: 131 VGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQ 190
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIR--NKWETDVFVGAALIDMYAKCSCVVN 126
+ P + + + + G+ +H VIR N V AL+DMYAKC +
Sbjct: 191 VRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGL 250
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISASAD 153
ARQ+F+ + ++ P+E T++++I
Sbjct: 251 ARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGF 310
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
AL G++LH + R+ F +++ + TALVDMY KC ++ AR LF+ + + V+ W AM
Sbjct: 311 TGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAM 370
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
++ YA +A +LF++M+ V+P +T V +LS C+ G D G+ + S +
Sbjct: 371 LSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGK-WVHSYIDKER 429
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
++ T +VD+ G ++ A L ++ + D +W A++ +HG+ E AL
Sbjct: 430 VEVDCILNTALVDMYAKCGDINAAGRLFIEA-ISRDICMWNAIITGFAMHGY---GEEAL 485
Query: 333 EKLIELE 339
+ E+E
Sbjct: 486 DIFAEME 492
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 139/282 (49%), Gaps = 38/282 (13%)
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
NF P LKAC +S + G+ IH V++ + DVFVG AL+ MY +C+CV AR VFD
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
K++ERD PSE +V++++ AD A +
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213
Query: 160 GRELHGFSWRHRFE--LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
G+ +H + R+ + V TAL+DMYAKCG + +AR LF L +K VVSW AMI G
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 273
Query: 218 AMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
+ LF +M++E + P+ IT + ++ C G G+ ++R+ S
Sbjct: 274 IRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRN-GFSVS 332
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
+ T +VD+ G + A L + + D +W A+L++
Sbjct: 333 LALATALVDMYGKCSDIRNARALFDSTQNR-DVMIWTAMLSA 373
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/538 (40%), Positives = 331/538 (61%), Gaps = 36/538 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y++ + NA +LFD IP +++ WN +I YA G Y+ A+EL+ +++ +
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD T + AC+ +IE GR++H + + + +++ + ALID+Y+KC + A +
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F+++ +D P++ T+++++ A A + A+
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 383
Query: 158 PQGRELHGF-SWRHRFELNVK-VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
GR +H + R + N ++T+L+DMYAKCG ++ A +F + K + SWNAMI
Sbjct: 384 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 443
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+AMHG + + DLF +M K +QPD ITFVG+LSACS G+ D GR F +M +DY +
Sbjct: 444 GFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMT 503
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY CM+DLLGHSG EA ++I M ++PD +W +LL +CK+HG+V+L E E
Sbjct: 504 PKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAEN 563
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
LI++EP + G+YV+LSNIYA A W VAK R L+ D+G+KK CS IE+ + H F+
Sbjct: 564 LIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFII 623
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD HP EIY L+ +E +++AG+VP T V ++E + K + HSE+LAIAFGL
Sbjct: 624 GDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGL 683
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I+T GT+L I KNL++C +CH A K ISKI +REI RD R+HHF+DG+CSC DYW
Sbjct: 684 ISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 182/403 (45%), Gaps = 100/403 (24%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +F I + NL +WN + R +A + A++LY ++ +GL+P+++TFPF LK+C+
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY--------------------------- 118
A +EG++IH V++ + D++V +LI MY
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 119 ----AKCSCVVNARQVFDKILERD---------------------------------PSE 141
A + NA+++FD+I +D P E
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
+T+VTV+SA A ++ GR++H + H F N+K+ AL+D+Y+KCG ++ A LFE+
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEG 260
L K V+SWN +I GY +AL LF++M + P+ +T + +L AC+ G D G
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Query: 261 RMFF------------ESMVRDYHID--------------------PSVQHYTCMVDLLG 288
R S +R ID S+ + M+
Sbjct: 387 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFA 446
Query: 289 HSGRLDEACDLIMQMR---VKPDPGVWGALLNSCKLHGHVKLA 328
GR D + DL +MR ++PD + LL++C G + L
Sbjct: 447 MHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG 489
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 139/307 (45%), Gaps = 40/307 (13%)
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
++ ++++IGL N+ ++ C LS EG V + E ++ + + +A
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFC-ILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHA 110
Query: 120 KCSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
S V+A +++ ++ P+ T V+ + A A +G+++HG + +L++
Sbjct: 111 LSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLY 170
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK----- 232
V T+L+ MY + G ++ A +F++ + VVS+ A+I GYA G+ A LF++
Sbjct: 171 VHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKD 230
Query: 233 ---------------------------MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
MK V+PD T V V+SAC++ G + GR
Sbjct: 231 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ-VH 289
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
+ D+ +++ ++DL G L+ AC L ++ K D W L+ + H+
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DVISWNTLIGG---YTHM 345
Query: 326 KLAELAL 332
L + AL
Sbjct: 346 NLYKEAL 352
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/540 (37%), Positives = 319/540 (59%), Gaps = 36/540 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T+L+ Y CDCL +A ++ D +P++N+ W +I Y+ G A+ ++ ++
Sbjct: 88 LRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSD 147
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P+ FTF L +C S + G++IH +++ +++ +FVG++L+DMYAK + AR
Sbjct: 148 GKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAR 207
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
++F+ + ERD P+ T ++++A + +A
Sbjct: 208 EIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLA 267
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L G++ H R ++ +L+DMY+KCG + A+ LF+ + E+ +SWNAM+
Sbjct: 268 LLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLV 327
Query: 216 GYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYH 272
GY+ HG + L+LF M+DE V+PD +T + VLS CS G + D G ++ MV +Y
Sbjct: 328 GYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYG 387
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I P +HY C+VD+LG +GR+DEA + I +M KP GV G+LL +C++H V + E
Sbjct: 388 IKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVG 447
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
+LIE+EP +AGNYVILSN+YA A WE V +R +M+ + + K SWI+ + H F
Sbjct: 448 HRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYF 507
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
+ D +HP +E+ AK+K + +MK+AGYVP V +DV+ ++K M+ HSE+LA+ F
Sbjct: 508 HANDRTHPRREEVLAKMKEISIKMKQAGYVPDISCVLYDVDEEQKEKMLLGHSEKLALTF 567
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
GLI T +G + + KNL+IC DCH K SK+ ERE+++RD NR+H GICSCGDYW
Sbjct: 568 GLITTGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVKGICSCGDYW 627
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 139/279 (49%), Gaps = 38/279 (13%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
L AC A+ EG+R+H +I+ ++ ++ L+ Y KC C+ +AR+V D++ E++
Sbjct: 58 LNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 117
Query: 139 --------------------------------PSEATLVTVISASADIAALPQGRELHGF 166
P+E T TV+++ + L G+++HG
Sbjct: 118 VSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGL 177
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ ++ ++ V ++L+DMYAK G ++ AR +FE L E+ VVS A+I GYA G +A
Sbjct: 178 IVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEA 237
Query: 227 LDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF-ESMVRDYHIDPSVQHYTCMV 284
L++F++++ E ++P+++T+ +L+A S L D G+ + R+ +Q+ ++
Sbjct: 238 LEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN--SLI 295
Query: 285 DLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
D+ G L A L M + W A+L HG
Sbjct: 296 DMYSKCGNLSYAQRLFDNMPERTAIS-WNAMLVGYSKHG 333
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 88/151 (58%), Gaps = 2/151 (1%)
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+++A D AL +G+ +H + R+ ++T L+ Y KC ++ AR + +++ EK
Sbjct: 57 LLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 116
Query: 207 VVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
VVSW AMI+ Y+ GHS++AL +F E M+ + +P+ TF VL++C R G+
Sbjct: 117 VVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHG 176
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+V+ ++ D + + ++D+ +G+++EA
Sbjct: 177 LIVK-WNYDSHIFVGSSLLDMYAKAGQIEEA 206
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 6/150 (4%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
F+ VL L+ +YS C L A +LFD +P+R WN ++ Y+ +G +EL +RL
Sbjct: 286 FYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLEL-FRL 344
Query: 65 L--EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYAK 120
+ E + PD T L CS + G I++ ++ ++ + D ++DM +
Sbjct: 345 MRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGR 404
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISA 150
+ A + F K + P+ L +++ A
Sbjct: 405 AGRIDEAFE-FIKRMPSKPTAGVLGSLLGA 433
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/534 (39%), Positives = 326/534 (61%), Gaps = 35/534 (6%)
Query: 14 VHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDN 73
V+++ L +A +LF+ + R++ WN++I Y N + A+ L+ RL + G+ ++
Sbjct: 248 VNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKAND 307
Query: 74 FTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS----------- 122
TF L ++L+++ +G+ IHE V ++ D V AL+ +Y +C
Sbjct: 308 ITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVD 367
Query: 123 ------------CVVNARQVFDK----------ILERDPSEATLVTVISASADIAALPQG 160
CV A+ F K + R P+ ATLV V+ A +AAL +G
Sbjct: 368 MGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKG 427
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMH 220
R++H +RF + + V+TAL++MY KCG + A ++FE++ ++ ++ WN+M+ YA H
Sbjct: 428 RQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQH 487
Query: 221 GHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQH 279
G+ + L LF +M+ D V+ D ++FV VLSA S G +G +F +M++D+ I P+ +
Sbjct: 488 GYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPEL 547
Query: 280 YTCMVDLLGHSGRLDEACDLIMQMR-VKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
Y C+VDLLG +GR+ EA D+++++ PD +W LL +C+ H A+ A E+++E
Sbjct: 548 YGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLER 607
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDAS 398
+P +G YV+LSN+YA A +W+GV ++RKLM RG+KK S IE+ N+ H FL GD S
Sbjct: 608 DPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRS 667
Query: 399 HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTP 458
HP IYA+L L M+ AGY+P T+ + HDVE++ K +M+ HSERLAIAFGLI+TP
Sbjct: 668 HPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLISTP 727
Query: 459 DGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
GT L + KNL++C DCH A K+ISK+ REI VRD +R+H+FKDG CSC DYW
Sbjct: 728 PGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 781
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 185/372 (49%), Gaps = 37/372 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + ++ L+ +Y+ C + A Q+F+ + ++++F W +I Y G Y+ A+ ++
Sbjct: 34 GFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMF 93
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
Y++ E ++P T+ L AC++ ++++G IH +++ +E DVFVG ALI+MY KC
Sbjct: 94 YQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKC 153
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
V A F ++ RD P++ TL TV
Sbjct: 154 GSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVF 213
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A D L +G+ ++G E +V+V + V+M+ GL+ AR LFE + ++ VV
Sbjct: 214 NAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVV 273
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WN +IT Y + + +A+ LF ++ +D V+ + ITFV +L+ + +G++ E +
Sbjct: 274 TWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHE-L 332
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
V++ D T ++ L G +A + + M K D W + + +G K
Sbjct: 333 VKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSK-DVITWTVMCVAYAQNGFRKE 391
Query: 328 AELALEKLIELE 339
A L L + ++LE
Sbjct: 392 A-LQLFQEMQLE 402
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 164/358 (45%), Gaps = 38/358 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + T L+++Y+ C + A F R+ R++ W +I A + + +A LY
Sbjct: 135 GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLY 194
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+ G+VP+ T A + + EG+ ++ V E+DV V + ++M+
Sbjct: 195 RRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNA 254
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +AR++F+ +++RD ++ T V ++
Sbjct: 255 GLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLML 314
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+ + +L +G+ +H ++ + V TAL+ +Y +C A +F + K V+
Sbjct: 315 NVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVI 374
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W M YA +G +AL LF++M+ E +P T V VL C+ +GR +
Sbjct: 375 TWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHI 434
Query: 268 VRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+ + + ++ V+ T ++++ G G++ EA + +M K D VW ++L + HG+
Sbjct: 435 IENRFRMEMVVE--TALINMYGKCGKMAEAMSVFEKM-AKRDILVWNSMLGAYAQHGY 489
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 130/282 (46%), Gaps = 38/282 (13%)
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD F L+ CS+ ++ GRR+H V +E + V LI MYA+C V A+QV
Sbjct: 2 PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61
Query: 131 FDKILERD----------------------------------PSEATLVTVISASADIAA 156
F+ ILER P++ T V +++A A +
Sbjct: 62 FE-ILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
L G E+HG + FE +V V TAL++MY KCG V+ A + F++L + VVSW AMI
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180
Query: 217 YAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
H A L+ +M+ D V P+ IT V +A EG+ F +V ++
Sbjct: 181 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGK-FVYGLVSSGVMES 239
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
V+ V++ G++G L +A L M V D W ++
Sbjct: 240 DVRVMNSAVNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVIT 280
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 3/191 (1%)
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P A V ++ + + GR +H FE N V L+ MYA+CG V A+ +
Sbjct: 2 PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLF 257
FE L K V +W MI Y G +AL +F +M++E V P +T+V +L+AC+
Sbjct: 62 FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 121
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
+G M + + V T ++++ G + A D ++ + D W A++
Sbjct: 122 KDG-MEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHR-DVVSWTAMIA 179
Query: 318 SCKLHGHVKLA 328
+C H LA
Sbjct: 180 ACVQHDQFALA 190
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 51/90 (56%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F V+ T L+++Y C + A +F+++ +R++ +WN ++ AYA +G Y+ ++L+
Sbjct: 439 FRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFN 498
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEG 92
++ G+ D +F L A S ++ +G
Sbjct: 499 QMQLDGVKADAVSFVSVLSALSHSGSVTDG 528
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/539 (40%), Positives = 323/539 (59%), Gaps = 36/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ LV +Y+ + +FD++P +++ W +I +A NG + A+EL+ + G
Sbjct: 456 VGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEG 515
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D L ACS L I + IH +IR K +D+ + ++D+Y +C V A
Sbjct: 516 IDLDVMMISSILLACSGLKLISSVKEIHSYIIR-KGLSDLVLQNGIVDVYGECGNVDYAA 574
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
++F+ I +D P +LV+++SA+A ++
Sbjct: 575 RMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLS 634
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL +G+E+HGF R F L + + LVDMYA+CG ++ +RN+F +R K +V W +MI
Sbjct: 635 ALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMIN 694
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
Y MHG A+DLF +M+DE + PDHI FV VL ACS GL +EGR F ESM +Y ++
Sbjct: 695 AYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLE 754
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P +HY C+VDLLG + L+EA + M V+P VW ALL +C++H + +L E+A +K
Sbjct: 755 PWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQK 814
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L+E++P + GNYV++SN+YA W+ V ++R M G+KK+ CSWIEV NK H F++
Sbjct: 815 LLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMA 874
Query: 395 GDASHPNCDEIYAKLKWLEGRM-KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
D SHP EIY+KL + ++ KE GYV T+ V H+ + +EK M+ HSERLAIA+G
Sbjct: 875 RDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYG 934
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++ TP+G L ITKNL++C DCH K ISK ERE+ +RD NR+HHFK G+CSCGD W
Sbjct: 935 MLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 993
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 154/313 (49%), Gaps = 36/313 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L+T+LV +Y C CL +A +LFD +P + +F WN +I AY NG ++ELY + G
Sbjct: 152 LSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSG 211
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D TFP LKAC L G +H I+ + + VFV +++ MY KC+ + AR
Sbjct: 212 IPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGAR 271
Query: 129 QVFDKILERD----------------------------------PSEATLVTVISASADI 154
Q+FD++ E++ P+ T V + A D
Sbjct: 272 QLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDS 331
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
+ + QG +H + + +NV V AL+ MYA+ G + A N+F + + +SWN+M+
Sbjct: 332 SFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSML 391
Query: 215 TGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+G+ +G +AL + +M+D Q PD + + +++A +R G G M + +
Sbjct: 392 SGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNG-MQIHAYAMKNGL 450
Query: 274 DPSVQHYTCMVDL 286
D +Q +VD+
Sbjct: 451 DSDLQVGNSLVDM 463
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 184/360 (51%), Gaps = 41/360 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQR-NLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+A +V +Y+ C+ L+ A QLFDR+P++ ++ WN +I AY+ NG A+ L+ + +
Sbjct: 253 VANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKA 312
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
L P+ +TF AL+AC S I++G IH V+++ + +VFV ALI MYA+ + A
Sbjct: 313 SLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEA 372
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
+F + + D P ++++I+ASA
Sbjct: 373 ANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARS 432
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
G ++H ++ ++ + +++V +LVDMYAK +K +F+++ +K VVSW +I
Sbjct: 433 GNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTII 492
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
G+A +G ++AL+LF +++ E + D + +L ACS L + ++R
Sbjct: 493 AGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS 552
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
D +Q+ +VD+ G G +D A + + K D W +++ SC +H LA ALE
Sbjct: 553 DLVLQN--GIVDVYGECGNVDYAARMFELIEFK-DVVSWTSMI-SCYVHN--GLANEALE 606
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 168/350 (48%), Gaps = 39/350 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A L+ +Y+ + A +F + + WN ++ + NG Y A++ Y+ + + G
Sbjct: 355 VANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAG 414
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
PD + A + G +IH ++N ++D+ VG +L+DMYAK +
Sbjct: 415 QKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMD 474
Query: 129 QVFDKILERDPSEATLV---------------------------------TVISASADIA 155
+FDK+ ++D T + +++ A + +
Sbjct: 475 CIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLK 534
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+ +E+H + R ++ ++ +VD+Y +CG V A +FE + K VVSW +MI+
Sbjct: 535 LISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMIS 593
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD-YHI 273
Y +G + +AL+LF MK+ V+PD I+ V +LSA + +G+ ++R + +
Sbjct: 594 CYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVL 653
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+ S+ + +VD+ G L+++ ++ +R K D +W +++N+ +HG
Sbjct: 654 EGSLA--STLVDMYARCGTLEKSRNVFNFIRNK-DLVLWTSMINAYGMHG 700
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 138/295 (46%), Gaps = 46/295 (15%)
Query: 71 PDNFT----FPFALKACSALSAIEEGRRIHEDVI-RNKWETDVFVGAALIDMYAKCSCVV 125
P F+ + L+ C + A+ EG+++H +I N VF+ L+ MY KC C+V
Sbjct: 108 PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLV 167
Query: 126 NARQVFDKI--------------------------LERD------PSEA-TLVTVISASA 152
+A ++FD + L R+ P +A T ++ A
Sbjct: 168 DAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACG 227
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR-VVSWN 211
+ G E+HG + + + V V ++V MY KC + AR LF+++ EK VVSWN
Sbjct: 228 LLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWN 287
Query: 212 AMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV-- 268
+MI+ Y+ +G S +AL LF +M K + P+ TFV L AC +G MF + V
Sbjct: 288 SMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQG-MFIHATVLK 346
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
Y+I+ V + ++ + G++ EA ++ M D W ++L+ +G
Sbjct: 347 SSYYINVFVAN--ALIAMYARFGKMGEAANIFYNMD-DWDTISWNSMLSGFVQNG 398
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF LA+ LV +Y+ C L + +F+ I ++L LW +I AY +G AI+L+
Sbjct: 650 GFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLF 709
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMYA 119
R+ + + PD+ F L ACS + EGRR E ++ +++ + + L+D+
Sbjct: 710 RRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLES-MKYEYQLEPWPEHYVCLVDLLG 768
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISA 150
+ + + A Q F K +E +P+ ++ A
Sbjct: 769 RANHLEEAYQ-FVKGMEVEPTAEVWCALLGA 798
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 17/208 (8%)
Query: 128 RQVFDKILERDPSEATL----VTVISASADIAALPQGRELHGFSWRHRFELN-VKVKTAL 182
+ + D + PS+ +L +V+ AL +G+++H N V + T L
Sbjct: 97 QSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRL 156
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DH 241
V MY KCG + A LF+ + K + +WNAMI Y +G +L+L+ +M+ P D
Sbjct: 157 VFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDA 216
Query: 242 ITFVGVLSACS-----RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
TF +L AC R G G E V + S+ V + L+ A
Sbjct: 217 CTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSI------VGMYTKCNDLNGA 270
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGH 324
L +M K D W +++++ +G
Sbjct: 271 RQLFDRMPEKEDVVSWNSMISAYSSNGQ 298
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/555 (40%), Positives = 332/555 (59%), Gaps = 45/555 (8%)
Query: 3 FGFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
FG+ +++ L+ +YS C L +A ++FD IP+RN+ W +IR Y NG A+ L
Sbjct: 105 FGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSL 164
Query: 61 YYRLL------EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAAL 114
+ LL + + D+ + ACS ++A IH VI+ ++ V VG L
Sbjct: 165 FKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTL 224
Query: 115 IDMYAKCS--CVVNARQVFDKILERD----------------PSEA-------------- 142
+D YAK V AR++FD+I+++D +EA
Sbjct: 225 LDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVT 284
Query: 143 ----TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
TL TV+ A + AL G+ +H R E +V V T+++DMY KCG V+ AR
Sbjct: 285 FNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLA 344
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLF 257
F++++ K V SW AMI GY MHGH+ KAL+LF M D V+P++ITFV VL+ACS GL
Sbjct: 345 FDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLH 404
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
D G +F +M + ++P ++HY CMVDLLG +G L +A DLI +M+++PD +W +LL
Sbjct: 405 DVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLA 464
Query: 318 SCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKS 377
+C++H +V+LAE+++ +L EL+P + G Y++LS+IYA + W+ V ++R M +RG+ K
Sbjct: 465 ACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKP 524
Query: 378 IACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEK 437
S +E+ + H FL GD HP ++IY L L ++ EAGYV T SV HDV+ +EK
Sbjct: 525 PGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEK 584
Query: 438 ANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNR 497
+ HSE+LAIAFG++NT G+ + + KNL++C DCH IK ISKI +RE VRD R
Sbjct: 585 EMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKR 644
Query: 498 YHHFKDGICSCGDYW 512
+HHFKDG CSCGDYW
Sbjct: 645 FHHFKDGFCSCGDYW 659
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 185/380 (48%), Gaps = 58/380 (15%)
Query: 24 HNAHQLFDR-IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
N LF+R + + ++F WN +I A +G A+ + + ++ L P +FP A+KA
Sbjct: 26 QNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKA 85
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI-------- 134
CS+L I G++ H+ +++D+FV +ALI MY+ C + +AR+VFD+I
Sbjct: 86 CSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSW 145
Query: 135 ------------------------LERDPSEAT-------LVTVISASADIAALPQGREL 163
+E + +AT +V+VISA + +AA +
Sbjct: 146 TSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESI 205
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGL--VKVARNLFEQLREKRVVSWNAMITGYAMHG 221
H F + F+ V V L+D YAK G V VAR +F+Q+ +K VS+N++++ YA G
Sbjct: 206 HSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSG 265
Query: 222 HSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQH 279
S +A D+F ++ E V + IT VL A S G G+ + ++R ++ V
Sbjct: 266 MSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIV 324
Query: 280 YTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
T ++D+ GR++ A +M+ K + W A++ +HGH K +EL
Sbjct: 325 GTSIIDMYCKCGRVETARLAFDRMKNK-NVRSWTAMIAGYGMHGHAA-------KALELF 376
Query: 340 PH--DAG---NYVILSNIYA 354
P D+G NY+ ++ A
Sbjct: 377 PAMIDSGVRPNYITFVSVLA 396
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG ++ T ++ +Y C + A FDR+ +N+ W +I Y +G A+EL
Sbjct: 316 MGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALEL 375
Query: 61 YYRLLEIGLVPDNFTFPFALKACS 84
+ +++ G+ P+ TF L ACS
Sbjct: 376 FPAMIDSGVRPNYITFVSVLAACS 399
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/537 (39%), Positives = 322/537 (59%), Gaps = 34/537 (6%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
A LV +YS C+ + +A + +D +P++++ WN LI Y+ G + A+ L+ ++ +
Sbjct: 322 AVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDI 381
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
+ T LK+ ++L AI+ ++IH I++ +D +V +L+D Y KC+ + A +
Sbjct: 382 DFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASK 441
Query: 130 VFDKILERD---------------------------------PSEATLVTVISASADIAA 156
+F++ D P ++++A A+++A
Sbjct: 442 IFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSA 501
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
QG++LH + + F ++ +LV+MYAKCG ++ A F ++ + +VSW+AMI G
Sbjct: 502 YEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGG 561
Query: 217 YAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
YA HGH +AL LF +M +D V P+HIT V VL AC+ GL +EG+ +FE M + I P
Sbjct: 562 YAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKP 621
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+ +HY CM+DLLG SG+L+EA +L+ + + D VWGALL + ++H +++L + A + L
Sbjct: 622 TQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKML 681
Query: 336 IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG 395
+LEP +G +V+L+NIYA A WE VAK+RK M D +KK SWIE+K+K + F+ G
Sbjct: 682 FDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVG 741
Query: 396 DASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLI 455
D SH DEIYAKL L + +AGY E H+V+ EK ++ HSE+LA+AFGLI
Sbjct: 742 DRSHSRSDEIYAKLDQLGDLLSKAGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGLI 801
Query: 456 NTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
TP G + + KNL+IC DCH KF+ KI REI VRD+NR+HHFKDG CSCGDYW
Sbjct: 802 ATPPGGPIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 167/351 (47%), Gaps = 38/351 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF P L LV LYS C A +L D + ++ W+ L+ Y NG E A+ ++
Sbjct: 11 GFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVF 70
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ +G+ + FTFP LKACS + GR++H + +E+D FV L+ MYAKC
Sbjct: 71 NEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKC 130
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ ++R++F I+ER+ P+E ++ ++
Sbjct: 131 GLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIIL 190
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A A + GR++HG + +L+ ALVDMY+K G ++ A +F+ + VV
Sbjct: 191 NACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVV 250
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNA+I G +H + AL L ++MK +P+ T L AC+ G + GR S+
Sbjct: 251 SWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSL 310
Query: 268 VR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
++ D H D + +VD+ +D+A M K D W AL++
Sbjct: 311 IKMDAHSD--LFAAVGLVDMYSKCEMMDDARRAYDSMP-KKDIIAWNALIS 358
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 194/442 (43%), Gaps = 70/442 (15%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF +A LV +Y+ C L ++ +LF I +RN+ WN L Y + A+ L+
Sbjct: 112 GFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLF 171
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ G++P+ F+ L AC+ L + GR+IH +++ + D F AL+DMY+K
Sbjct: 172 KEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKA 231
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ A VF I D P+ TL + +
Sbjct: 232 GEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSAL 291
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A A + GR+LH + ++ LVDMY+KC ++ AR ++ + +K ++
Sbjct: 292 KACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDII 351
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACS--------------- 252
+WNA+I+GY+ G A+ LF KM +++ + T VL + +
Sbjct: 352 AWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTIS 411
Query: 253 -RGGLFDEGRMFFESMVRDY----HIDPSVQ-----------HYTCMVDLLGHSGRLDEA 296
+ G++ + + S++ Y HID + + YT M+ G +EA
Sbjct: 412 IKSGIYSDFYV-INSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEA 470
Query: 297 CDLIMQMR---VKPDPGVWGALLNSC-KLHGHVKLAELALEKLIELEPHDAGNYVILSNI 352
L +QM+ +KPDP + +LLN+C L + + +L + + D L N+
Sbjct: 471 LKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNM 530
Query: 353 YARAANWEGVAKLRKLMIDRGI 374
YA+ + E + + +RGI
Sbjct: 531 YAKCGSIEDADRAFSEIPNRGI 552
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 170/364 (46%), Gaps = 40/364 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG A LV +YS + A +F I ++ WN +I + ++A+ L
Sbjct: 212 MGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALML 271
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ G P+ FT ALKAC+A+ E GR++H +I+ +D+F L+DMY+K
Sbjct: 272 LDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSK 331
Query: 121 CSCVVNARQVFDKILERDP---------------------------------SEATLVTV 147
C + +AR+ +D + ++D ++ TL TV
Sbjct: 332 CEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTV 391
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ + A + A+ +++H S + + V +L+D Y KC + A +FE+ + +
Sbjct: 392 LKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDL 451
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V++ +MIT Y+ +G +AL L+ +M+D +++PD +L+AC+ +++G+
Sbjct: 452 VAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVH 511
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGH 324
++ + + +V++ G +++A ++ P+ G+ W A++ HGH
Sbjct: 512 AIK-FGFMCDIFASNSLVNMYAKCGSIEDADRAFSEI---PNRGIVSWSAMIGGYAQHGH 567
Query: 325 VKLA 328
K A
Sbjct: 568 GKEA 571
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 117/234 (50%), Gaps = 5/234 (2%)
Query: 105 ETDVFVGAALIDMYAKCSCVVNARQVFDK--ILERDPSEATLVTVISASADIAALPQGRE 162
E DV ++L+ Y + V A VF++ +L +E T +V+ A + L GR+
Sbjct: 44 ELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRK 103
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
+HG + FE + V LV MYAKCGL+ +R LF + E+ VVSWNA+ + Y
Sbjct: 104 VHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSEL 163
Query: 223 STKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYT 281
+A+ LF++M + + P+ + +L+AC+ D GR M++ +D
Sbjct: 164 CGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLK-MGLDLDQFSAN 222
Query: 282 CMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+VD+ +G ++ A + Q PD W A++ C LH LA + L+++
Sbjct: 223 ALVDMYSKAGEIEGAV-AVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEM 275
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + LV++Y+ C + +A + F IP R + W+ +I YA +G + A+ L+
Sbjct: 516 GFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLF 575
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHE 97
++L G+ P++ T L AC+ + EG++ E
Sbjct: 576 NQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFE 611
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 162 ELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHG 221
ELH + F + ++ LV +Y+KC AR L ++ E VVSW+++++GY +G
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 222 HSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGR 261
+AL +F +M V+ + TF VL ACS + GR
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGR 102
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/540 (37%), Positives = 318/540 (58%), Gaps = 36/540 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T+L+ Y CDCL +A ++ D +P++N+ W +I Y+ G A+ ++ ++
Sbjct: 89 LRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSD 148
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P+ FTF L +C S + G++IH +++ +++ +FVG++L+DMYAK + AR
Sbjct: 149 GKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAR 208
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
++F+ + ERD P+ T ++++A + +A
Sbjct: 209 EIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLA 268
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L G++ H R ++ +L+DMY+KCG + AR LF+ + E+ +SWNAM+
Sbjct: 269 LLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLV 328
Query: 216 GYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYH 272
GY+ HG + L+LF M+DE V+PD +T + VLS CS G + D G F+ MV +Y
Sbjct: 329 GYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYG 388
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
P +HY C+VD+LG +GR+DEA + I +M KP GV G+LL +C++H V + E
Sbjct: 389 TKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVG 448
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
+LIE+EP +AGNYVILSN+YA A W V +R +M+ + + K SWI+ + H F
Sbjct: 449 RRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYF 508
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
+ D +HP +E+ AK+K + +MK+AGYVP V +DV+ ++K M+ HSE+LA+ F
Sbjct: 509 HANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTF 568
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
GLI T +G + + KNL+IC DCH K SK+ ERE+++RD NR+H DGICSCGDYW
Sbjct: 569 GLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 156/336 (46%), Gaps = 49/336 (14%)
Query: 27 HQLFDRIPQRNLFLWNVL-IRAYAWNGPYEVAIELYYRLLEIGLVPDNFTF---PFALKA 82
H+ F P N L +L I NG + A LLE+ ++ F L A
Sbjct: 9 HRSFSSSPT-NYVLQTILPISQLCSNGRLQEA------LLEMAMLGPEMGFHGYDALLNA 61
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---- 138
C A+ +G+R+H +I+ ++ ++ L+ Y KC C+ +AR+V D++ E++
Sbjct: 62 CLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSW 121
Query: 139 -----------------------------PSEATLVTVISASADIAALPQGRELHGFSWR 169
P+E T TV+++ + L G+++HG +
Sbjct: 122 TAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVK 181
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
++ ++ V ++L+DMYAK G +K AR +FE L E+ VVS A+I GYA G +AL++
Sbjct: 182 WNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEM 241
Query: 230 FEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF-ESMVRDYHIDPSVQHYTCMVDLL 287
F ++ E + P+++T+ +L+A S L D G+ + R+ +Q+ ++D+
Sbjct: 242 FHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN--SLIDMY 299
Query: 288 GHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
G L A L M + W A+L HG
Sbjct: 300 SKCGNLSYARRLFDNMPERTAIS-WNAMLVGYSKHG 334
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
F+ VL L+ +YS C L A +LFD +P+R WN ++ Y+ +G +EL +RL
Sbjct: 287 FYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLEL-FRL 345
Query: 65 L--EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMYAK 120
+ E + PD T L CS + G I + ++ ++ T ++DM +
Sbjct: 346 MRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGR 405
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISA 150
+ A + F K + P+ L +++ A
Sbjct: 406 AGRIDEAFE-FIKRMPSKPTAGVLGSLLGA 434
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/507 (41%), Positives = 314/507 (61%), Gaps = 34/507 (6%)
Query: 40 LWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDV 99
L N +IR Y + + ++ +Y ++ + G+ PD+ TFP LK+ + L E G+ IH +
Sbjct: 109 LCNSMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCI 168
Query: 100 IRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD--------------------- 138
I+ +E++V+V AL++MY CS V +ARQVFD+I +R+
Sbjct: 169 IQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVI 228
Query: 139 ------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
P E T+V V+ A A + AL QGR + + +R LNV V TAL+DMY
Sbjct: 229 DVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMY 288
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFV 245
AKCG+V A +F+ +R K V +WN +I+GYAM+G AL F +M ++ +PD +TF+
Sbjct: 289 AKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFL 348
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
GVL AC GL +EGR +F SM ++ + P ++HY CMVDLLG +G LDEA LI M +
Sbjct: 349 GVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSM 408
Query: 306 KPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKL 365
+PDP +W LL +C++HG+++L E A++KL+ELEP++ NYV+L+N+YAR W+ V ++
Sbjct: 409 QPDPIIWRELLGACRIHGNIQLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEV 468
Query: 366 RKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGT 425
R++M R ++K CS IE+ N + F+ + P +E+Y L + ++K AGYV T
Sbjct: 469 REMMDCRRVRKVPGCSSIEIDNVVYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGYVADT 528
Query: 426 ESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKI 485
+D+E +EK + + HSE+LA+AFGL+ +P G L I KNL+IC DCH K +SK+
Sbjct: 529 GMASYDIEEEEKEHSLMYHSEKLALAFGLLKSPSGLTLRIVKNLRICQDCHGFFKIVSKV 588
Query: 486 TEREITVRDVNRYHHFKDGICSCGDYW 512
R+I+VRD NR+HHF G CSC DYW
Sbjct: 589 YRRDISVRDRNRFHHFVGGACSCKDYW 615
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 149/324 (45%), Gaps = 26/324 (8%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MGF + ++T LV++Y C + +A Q+FD IP RN+ WN LI Y N + I++
Sbjct: 171 MGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDV 230
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + G P T L AC+ L A+ +GR I + + N+ +VFVG ALIDMYAK
Sbjct: 231 FREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAK 290
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGR---ELHGFSWRHRFELNVK 177
C V A ++F + R + T +IS A GR L FS +
Sbjct: 291 CGVVDEAEKIFKAM--RVKNVYTWNVLISGYA-----MNGRGESALQAFSRMIMEKFKPD 343
Query: 178 VKTALVDMYAKC--GLVKVARNLFEQLREK-----RVVSWNAMITGYAMHGHSTKALDLF 230
T L + A C GLV R F ++E+ R+ + M+ G +A L
Sbjct: 344 EVTFLGVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLI 403
Query: 231 EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV-QHYTCMVDLLGH 289
+ M +QPD I + +L AC G G + ++ ++P+ ++Y + +L
Sbjct: 404 QAM--SMQPDPIIWRELLGACRIHGNIQLGEFAIKKLLE---LEPNNGENYVLLANLYAR 458
Query: 290 SGRLDEACDLIMQM---RVKPDPG 310
R D+ ++ M RV+ PG
Sbjct: 459 DQRWDKVGEVREMMDCRRVRKVPG 482
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/533 (39%), Positives = 321/533 (60%), Gaps = 35/533 (6%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
H VL +V++Y+ C CL +A ++FD +P +++ W LI ++ N A+ L+ ++L
Sbjct: 122 HLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQML 181
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
+G P++FT LKA + ++ G ++H ++ +++ V+VG+AL+DMYA+C +
Sbjct: 182 RLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMD 241
Query: 126 NARQVFDKILER---------------------------------DPSEATLVTVISASA 152
A+ FD + + P+ T +V+SA A
Sbjct: 242 AAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACA 301
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
I AL QG+ +H + +L + L+DMYAK G + A+ +F++L + VVSWN
Sbjct: 302 SIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNT 361
Query: 213 MITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
M+TG A HG + LD FE+M + ++P+ I+F+ VL+ACS GL DEG +FE +++ Y
Sbjct: 362 MLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFE-LMKKY 420
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
++P V HY VDLLG G LD A I +M ++P VWGALL +C++H +++L A
Sbjct: 421 KVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYA 480
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHA 391
E+ EL+PHD+G ++LSNIYA A W VAK+RK+M + G+KK ACSW+E++N H
Sbjct: 481 AERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHL 540
Query: 392 FLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIA 451
F++ D +HP EI K + + G++KE GYVP T V V+ E+ + HSE+LA+A
Sbjct: 541 FVANDETHPRIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALA 600
Query: 452 FGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
F L+NTP G+ + I KN+++C DCH AIKF+SK+ +REI VRD NR+H F+DG
Sbjct: 601 FALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDG 653
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 159/319 (49%), Gaps = 39/319 (12%)
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAKCSCVVNA 127
LVPD + LK C+ L +E+GR +H ++ + + + + + +++MYAKC C+ +A
Sbjct: 83 LVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDA 142
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
R++FD++ +D P+ TL +++ AS
Sbjct: 143 RRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSE 202
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L G +LH F ++ ++ +V V +ALVDMYA+CG + A+ F+ + K VSWNA+I
Sbjct: 203 HGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALI 262
Query: 215 TGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+G+A G AL L KM + QP H T+ VLSAC+ G ++G+ M++ +
Sbjct: 263 SGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKS-GL 321
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
++D+ +G +D+A + ++ VKPD W +L C HG K E
Sbjct: 322 KLIAFIGNTLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTMLTGCAQHGLGKETLDRFE 380
Query: 334 KL--IELEPHDAGNYVILS 350
++ I +EP++ +L+
Sbjct: 381 QMLRIGIEPNEISFLCVLT 399
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 24/235 (10%)
Query: 97 EDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAA 156
+D++R K ++D G +D+ + S V + ++ K+L+ +
Sbjct: 58 KDLLR-KSQSDGGTGLYALDLIQRGSLVPDY-NLYSKLLKE-------------CTRLGK 102
Query: 157 LPQGRELHG-FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+ QGR +H H + ++ ++ +V+MYAKCG + AR +F+++ K +V+W A+I
Sbjct: 103 VEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIA 162
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G++ + AL LF +M + QP+H T +L A D G ++ Y
Sbjct: 163 GFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLK-YGYQ 221
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
SV + +VD+ G +D A M K + W AL++ GH + E
Sbjct: 222 SSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS-WNALIS-----GHARKGE 270
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 74/163 (45%), Gaps = 12/163 (7%)
Query: 221 GHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHY 280
G ALDL ++ + PD+ + +L C+R G ++GR+ +V + +D +
Sbjct: 69 GTGLYALDLIQR--GSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQ 126
Query: 281 TCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL-- 338
+V++ G LD+A + +M K D W AL+ + + A L +++ L
Sbjct: 127 NIIVNMYAKCGCLDDARRMFDEMPTK-DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGF 185
Query: 339 EPHDAGNYVILSNIYARAANWEGV---AKLRKLMIDRGIKKSI 378
+P N+ LS++ + + G+ +L + G + S+
Sbjct: 186 QP----NHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSV 224
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/545 (39%), Positives = 313/545 (57%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF ++ LV +Y C+H+ +L++ + R+L WN + G Y+ + ++
Sbjct: 445 GFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIF 504
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
Y +LE G +P+ +TF L +CS L + GR++H +I+N+ + + FV ALIDMYAKC
Sbjct: 505 YHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKC 564
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +A F+++ RD P+E TL +
Sbjct: 565 MYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCL 624
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
S + +A+L G++LH ++ ++ V +ALVDMYAKCG ++ A LFE L + +
Sbjct: 625 SGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTI 684
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WN +I GYA +G KAL F M DE + PD +TF G+LSACS GL +EG+ F SM
Sbjct: 685 AWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSM 744
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
RD+ I P+V H CMVD+LG G+ DE D I +M++ + +W +L + K+H ++ L
Sbjct: 745 YRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVL 804
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E A KL EL+P + +Y++LSNI+A W+ V ++R LM +G+KK CSW+E
Sbjct: 805 GEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANG 864
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ H F+S D SHP EI+ KL L+ + YVP TE V H+V EK + HSER
Sbjct: 865 QVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSER 924
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+ F LI+T ++ I KNL+IC DCH +K IS IT +EI VRDV R+HHFK+G CS
Sbjct: 925 LALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACS 984
Query: 508 CGDYW 512
C D+W
Sbjct: 985 CNDFW 989
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 163/332 (49%), Gaps = 39/332 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + LV LY+ C + A ++F +P++N WNVL+ YA G ++L
Sbjct: 242 LGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKL 301
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++E+ + + FT LK C+ +++G+ IH +I+ +E + F+G L+DMY+K
Sbjct: 302 FCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSK 361
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C ++A VF I + D P++ T+ ++
Sbjct: 362 CGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSL 421
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+SA+ + L G+ +H W++ FE +V V ALV MY K G V L+E + ++ +
Sbjct: 422 LSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDL 481
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFD--EGRMFF 264
+SWNA ++G G + L +F M +E P+ TF+ +L +CS LFD GR
Sbjct: 482 ISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS--CLFDVHYGRQVH 539
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
++++ +D + T ++D+ L++A
Sbjct: 540 AHIIKN-QLDDNNFVCTALIDMYAKCMYLEDA 570
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 157/343 (45%), Gaps = 36/343 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L LV++Y+ C A + ++P R++ W LI+ G +I L+ + G
Sbjct: 149 LWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEG 208
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
++P+ FT LKACS A++ G+++H + D+FVG+AL+D+YAKC + A
Sbjct: 209 IMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELAS 268
Query: 129 QVFDKILERDP---------------------------------SEATLVTVISASADIA 155
++F + E++ +E TL TV+ A+
Sbjct: 269 KMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSK 328
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L QG+ +H + +E N + LVDMY+KCGL A +F+ +++ +V W+A+IT
Sbjct: 329 NLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALIT 388
Query: 216 GYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G S +++ LF M+ + P+ T +LSA + G G+ + V Y +
Sbjct: 389 CLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQS-IHACVWKYGFE 447
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
V +V + +G + + L M V D W A L+
Sbjct: 448 TDVAVSNALVTMYMKNGCVHDGTKLYESM-VDRDLISWNAYLS 489
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 114/250 (45%), Gaps = 12/250 (4%)
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+++ A +L + +HG + + + +LV++YAKC AR + ++ ++
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR 176
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR-MF 263
VVSW A+I G G + ++ LF++M++E + P+ T L ACS D G+ M
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMH 236
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
++ +D V + +VDL G ++ A + + M + D W LLN G
Sbjct: 237 AQAFKLGLLLDLFVG--SALVDLYAKCGEIELASKMFIGMPEQNDV-TWNVLLNGYAQRG 293
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAK---LRKLMIDRGIKKS--I 378
V ++EL+ N L+ + AN + + + + L+I G + + I
Sbjct: 294 DVTGVLKLFCSMMELDV--KCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFI 351
Query: 379 ACSWIEVKNK 388
C +++ +K
Sbjct: 352 GCGLVDMYSK 361
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/508 (43%), Positives = 297/508 (58%), Gaps = 45/508 (8%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++A KLVH YS L +A+ LFD + R+ W+V++ +A G Y + L+
Sbjct: 396 IVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRC 455
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G PDN+T PF A +L
Sbjct: 456 GARPDNYTLPFCGNANESLV---------------------------------------- 475
Query: 128 RQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
+FDK+ E P + +VTV+ A A + A+ + R + + R +F+L+V + TA++DM
Sbjct: 476 --LFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDM 533
Query: 186 YAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITF 244
+AKCG V+ AR +F+++ EK V+SW+AMI Y HG KALDLF M + + P+ IT
Sbjct: 534 HAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITL 593
Query: 245 VGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
V +L ACS GL +EG FF M DY + V+HYTC+VDLLG +GRLDEA LI M
Sbjct: 594 VSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMT 653
Query: 305 VKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAK 364
V+ D G+WGA L +C+ H V LAE A L+EL+P + G+Y++LSNIYA A WE VAK
Sbjct: 654 VEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAK 713
Query: 365 LRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPG 424
R LM R +KK +WIEV NK+H F GD +HP EIY LK L +++ GYVP
Sbjct: 714 TRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPD 773
Query: 425 TESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISK 484
T V HDV+ + K ++ HSE+LAIAFGLI TP+ T + I KNL++C DCH K +S
Sbjct: 774 TNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSA 833
Query: 485 ITEREITVRDVNRYHHFKDGICSCGDYW 512
IT R I VRD NR+HHFK+G CSCGDYW
Sbjct: 834 ITGRVIIVRDANRFHHFKEGACSCGDYW 861
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 139/278 (50%), Gaps = 55/278 (19%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+A KL++ YS L +A+ LFD + R+ W+V++ +A G Y + L+
Sbjct: 114 VVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRC 173
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G PDN+T PF ++AC L ++ AL+DMY KC + +A
Sbjct: 174 GARPDNYTLPFVIRACRDLKNLQ---------------------MALVDMYVKCREIEDA 212
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
R +FDK+ ERD P + +VTV+ A A +
Sbjct: 213 RFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKL 272
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
A+ + R + + R +F+L+V + TA++DMYAKCG V+ AR +F+++ EK V+SW+AMI
Sbjct: 273 GAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMI 332
Query: 215 TGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSAC 251
Y HG KALDLF M + PD IT +L AC
Sbjct: 333 AAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYAC 370
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 179/383 (46%), Gaps = 66/383 (17%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L LV +Y C + +A LFD++ +R+L W V+I YA G ++ L+ ++ E G
Sbjct: 195 LQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEG 254
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+VPD + AC+ L A+ + R I + + R K++ DV +G A+IDMYAKC CV +AR
Sbjct: 255 VVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAR 314
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
++FD++ E++ P + TL +++ A +
Sbjct: 315 EIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCR 374
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L Q R++H + H N+ V LV Y+ + A LF+ + + VSW+ M+
Sbjct: 375 NLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVG 434
Query: 216 GYA----------------------------MHGHSTKALDLFEKMKDE-VQPDHITFVG 246
G+A G++ ++L LF+KM++E V PD + V
Sbjct: 435 GFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVT 494
Query: 247 VLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
V+ AC++ G + R + + R + +D V T M+D+ G ++ A ++ +M
Sbjct: 495 VVFACAKLGAMHKARTIDDYIQRKKFQLD--VILGTAMIDMHAKCGCVESAREIFDRMEE 552
Query: 306 KPDPGVWGALLNSCKLHGHVKLA 328
K + W A++ + HG + A
Sbjct: 553 K-NVISWSAMIAAYGYHGQGRKA 574
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 133/264 (50%), Gaps = 20/264 (7%)
Query: 79 ALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD 138
AL C L+ + R++H + ++ V LI Y+ + +A +FD + RD
Sbjct: 87 ALVNCRNLTQV---RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRD 143
Query: 139 P-SEATLVTVISASAD-IAALPQGREL---------HGFSWRHRFELNVK-VKTALVDMY 186
S + +V + D I REL + + R ++K ++ ALVDMY
Sbjct: 144 SVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMALVDMY 203
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFV 245
KC ++ AR LF++++E+ +V+W MI GYA G + ++L LFEKM++E V PD + V
Sbjct: 204 VKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMV 263
Query: 246 GVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
V+ AC++ G + R+ + + R + +D V T M+D+ G ++ A ++ +M
Sbjct: 264 TVVFACAKLGAMHKARIIDDYIQRKKFQLD--VILGTAMIDMYAKCGCVESAREIFDRME 321
Query: 305 VKPDPGVWGALLNSCKLHGHVKLA 328
K + W A++ + HG + A
Sbjct: 322 EK-NVISWSAMIAAYGYHGQGRKA 344
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 55/92 (59%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F +L T ++ +++ C C+ +A ++FDR+ ++N+ W+ +I AY ++G A++L+
Sbjct: 520 FQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFP 579
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRR 94
+L G++P+ T L ACS +EEG R
Sbjct: 580 MMLRSGILPNKITLVSLLYACSHAGLVEEGLR 611
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 23/201 (11%)
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
ISA + L Q R++H + H N+ V L+ Y+ + A LF+ + +
Sbjct: 85 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 144
Query: 208 VSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACS-----RGGLFD--- 258
VSW+ M+ G+A G F E ++ +PD+ T V+ AC + L D
Sbjct: 145 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMALVDMYV 204
Query: 259 ------EGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDP 309
+ R F+ M + + +T M+ G+ +E+ L +MR V PD
Sbjct: 205 KCREIEDARFLFDKMQ-----ERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDK 259
Query: 310 GVWGALLNSCKLHGHVKLAEL 330
++ +C G + A +
Sbjct: 260 VAMVTVVFACAKLGAMHKARI 280
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/555 (41%), Positives = 331/555 (59%), Gaps = 45/555 (8%)
Query: 3 FGFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
FG+ +++ L+ +YS C L +A ++FD IP+RN+ W +IR Y NG A+ L
Sbjct: 105 FGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSL 164
Query: 61 YYRLL------EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAAL 114
+ LL + + D+ + ACS + A IH VI+ ++ V VG L
Sbjct: 165 FKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTL 224
Query: 115 IDMYAKCS--CVVNARQVFDKILERD----------------PSEA-------------- 142
+D YAK V AR++FD+I+++D +EA
Sbjct: 225 LDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVT 284
Query: 143 ----TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
TL TV+ A + AL G+ +H R E +V V T+++DMY KCG V+ AR
Sbjct: 285 FNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKA 344
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLF 257
F++++ K V SW AMI GY MHGH+ KAL+LF M D V+P++ITFV VL+ACS GL
Sbjct: 345 FDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLH 404
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
EG +F +M + ++P ++HY CMVDLLG +G L +A DLI +M++KPD +W +LL
Sbjct: 405 VEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLA 464
Query: 318 SCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKS 377
+C++H +V+LAE+++ +L EL+ + G Y++LS+IYA A W+ V ++R +M +RG+ K
Sbjct: 465 ACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKP 524
Query: 378 IACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEK 437
S +E+ + H FL GD HP ++IY L L ++ EAGYV T SV HDV+ +EK
Sbjct: 525 PGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEK 584
Query: 438 ANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNR 497
+ HSE+LAIAFG++NT G+ + + KNL++C DCH IK ISKI +RE VRD R
Sbjct: 585 EMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKR 644
Query: 498 YHHFKDGICSCGDYW 512
+HHFKDG CSCGDYW
Sbjct: 645 FHHFKDGGCSCGDYW 659
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 184/380 (48%), Gaps = 58/380 (15%)
Query: 24 HNAHQLFDR-IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
N LF+R + + ++F WN +I A +G A+ + + ++ L P +FP A+KA
Sbjct: 26 QNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKA 85
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEA 142
CS+L I G++ H+ +++D+FV +ALI MY+ C + +AR+VFD+I +R+
Sbjct: 86 CSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSW 145
Query: 143 T---------------------------------------LVTVISASADIAALPQGREL 163
T LV+VISA + + A +
Sbjct: 146 TSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESI 205
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGL--VKVARNLFEQLREKRVVSWNAMITGYAMHG 221
H F + F+ V V L+D YAK G V VAR +F+Q+ +K VS+N++++ YA G
Sbjct: 206 HSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSG 265
Query: 222 HSTKALDLFEKM-KDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQH 279
S +A ++F ++ K++V + IT VL A S G G+ + ++R ++ V
Sbjct: 266 MSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIV 324
Query: 280 YTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
T ++D+ GR++ A +M+ K + W A++ +HGH K +EL
Sbjct: 325 GTSIIDMYCKCGRVETARKAFDRMKNK-NVRSWTAMIAGYGMHGHAA-------KALELF 376
Query: 340 PH--DAG---NYVILSNIYA 354
P D+G NY+ ++ A
Sbjct: 377 PAMIDSGVRPNYITFVSVLA 396
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG ++ T ++ +Y C + A + FDR+ +N+ W +I Y +G A+EL
Sbjct: 316 MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALEL 375
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRR 94
+ +++ G+ P+ TF L ACS EG R
Sbjct: 376 FPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWR 409
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/550 (40%), Positives = 327/550 (59%), Gaps = 41/550 (7%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F P A+ L+H+Y+ C +A + FD IP N + + Y N ++ L+
Sbjct: 121 FPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVRNNLVYPSLALFR 180
Query: 63 RLLEIGLVP--DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+L+ G D A A + + +H V++ + D V ++D YAK
Sbjct: 181 KLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYAK 240
Query: 121 CSC--VVNARQVFDKILERDP-----------------------------------SEAT 143
+ AR+VFD +E+D + T
Sbjct: 241 GGRRDLGAARKVFD-TMEKDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVT 299
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
L ++ A A + G+ +H R E NV V T++VDMY+KCG V++AR F++++
Sbjct: 300 LSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIK 359
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRM 262
EK ++SW+AMITGY MHGH +ALD+F +M + P++ITF+ VL+ACS GL D+GR
Sbjct: 360 EKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGRY 419
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
++ +M + + I+P V+HY CMVDLLG +G LDEA LI +M+VKPD +WGALL++C++H
Sbjct: 420 WYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSACRIH 479
Query: 323 GHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSW 382
+V+LAE++ ++L EL+ + G YV+LSNIYA A W+ V ++R L+ RGI+K S
Sbjct: 480 KNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVLVKTRGIEKPPGYSS 539
Query: 383 IEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMIC 442
+E+K + H F GD SHP EIY+ L L +M+EAGYVP T SV HD++ +EKA+ +
Sbjct: 540 VELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPNTGSVLHDLDEEEKASALH 599
Query: 443 CHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFK 502
HSE+LAIAF L+N+ G+ + + KNL++C DCH AIK I+KI +REI VRD+ R+HHFK
Sbjct: 600 IHSEKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITKIAQREIIVRDLQRFHHFK 659
Query: 503 DGICSCGDYW 512
DG CSCGDYW
Sbjct: 660 DGSCSCGDYW 669
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 9/197 (4%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG + + T +V +YS C + A + F +I ++N+ W+ +I Y +G + A+++
Sbjct: 326 MGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDI 385
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYA 119
+ + G P+ TF L ACS +++GR + + R E V ++D+
Sbjct: 386 FNEMCRSGQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLG 445
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL---NV 176
+ C+ A + K ++ P A ++SA + + EL S + FEL N
Sbjct: 446 RAGCLDEAYGLI-KEMKVKPDAAIWGALLSA----CRIHKNVELAEISAKRLFELDATNC 500
Query: 177 KVKTALVDMYAKCGLVK 193
L ++YA+ G+ K
Sbjct: 501 GYYVLLSNIYAEAGMWK 517
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/551 (37%), Positives = 335/551 (60%), Gaps = 47/551 (8%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE-I 67
+ + LV +Y C + + ++FD + R + LWN +I YA N E A+ L+ + E
Sbjct: 336 VGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESA 395
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
GL+ ++ T + AC A + IH V++ + D FV AL+DMY++ + A
Sbjct: 396 GLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIA 455
Query: 128 RQVFDKILERD--------------------------------------------PSEAT 143
+++F K+ +RD P+ T
Sbjct: 456 KRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSIT 515
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
L+T++ + A ++AL +G+E+H ++ ++ +V V +ALVDMYAKCG ++++R +F+Q+
Sbjct: 516 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 575
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRM 262
+ V++WN ++ Y MHG+S A+D+ M + V+P+ +TF+ V +ACS G+ +EG
Sbjct: 576 IRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLK 635
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPD-PGVWGALLNSCKL 321
F +M +DY ++PS HY C+VDLLG +GR+ EA LI + D G W +LL +C++
Sbjct: 636 IFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRI 695
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
H ++++ E+A + LI+LEP+ A +YV+L+NIY+ A W ++R+ M +G++K CS
Sbjct: 696 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCS 755
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMI 441
WIE ++ H F++GD+SHP +++ L+ L RM++ GY+P T V H+VE DEK ++
Sbjct: 756 WIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRKEGYIPDTSCVLHNVEEDEKEILL 815
Query: 442 CCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF 501
C HSE+LAIAFG++NT GT + + KNL++C+DCH+A KFISK+ +REI +RDV R+HHF
Sbjct: 816 CGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKVVDREIILRDVRRFHHF 875
Query: 502 KDGICSCGDYW 512
K+G CSCGDYW
Sbjct: 876 KNGTCSCGDYW 886
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 173/379 (45%), Gaps = 45/379 (11%)
Query: 2 GFGFHPV-LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
G+G V +A LV+LY C +++FDRI +RN WN LI + +E+A+E
Sbjct: 123 GYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEA 182
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEE---GRRIHEDVIRNKWETDVFVGAALIDM 117
+ +L+ + P +FT ACS E G+++H +R K E + F+ L+ M
Sbjct: 183 FRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLR-KGELNSFIINTLVAM 241
Query: 118 YAKCSCVVNARQVFDKILERD---------------------------------PSEATL 144
Y K + +++ + RD P T+
Sbjct: 242 YGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTI 301
Query: 145 VTVISASADIAALPQGRELHGFSWRH-RFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
+V+ A + + L G+ELH ++ ++ + N V +ALVDMY C V +F+ +
Sbjct: 302 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMF 361
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGR 261
++++ WNAMITGYA + + +AL LF +M++ + + T GV+ AC R G F +
Sbjct: 362 DRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKE 421
Query: 262 MFFESMV-RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
+V R D VQ+ ++D+ G++D A + +M + D W ++
Sbjct: 422 AIHGFVVKRGLDRDRFVQN--ALMDMYSRLGKIDIAKRIFGKMEDR-DLVTWNTIITGYV 478
Query: 321 LHGHVKLAELALEKLIELE 339
+ A L L K+ LE
Sbjct: 479 FSERHEDALLMLHKMQILE 497
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 149/337 (44%), Gaps = 43/337 (12%)
Query: 41 WNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVI 100
W L+R+ + A+ Y ++ +G+ PDNF FP LKA + L ++ G++IH V
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 101 RNKWETD-VFVGAALIDMYAKCSCVVNARQVFDKILER---------------------- 137
+ + D V V L+++Y KC +VFD+I ER
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180
Query: 138 -----------DPSEATLVTVISASADIA---ALPQGRELHGFSWRHRFELNVKVKTALV 183
+PS TLV+V A ++ L G+++H + R + ELN + LV
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLR-KGELNSFIINTLV 239
Query: 184 DMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHI 242
MY K G + ++ L + +V+WN +++ + +AL+ +M E V+PD
Sbjct: 240 AMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGF 299
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
T VL ACS + G+ +++ +D + + +VD+ + ++ C +
Sbjct: 300 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDG 359
Query: 303 MRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
M G+W A++ + + E AL IE+E
Sbjct: 360 M-FDRKIGLWNAMITG---YAQNEYDEEALLLFIEME 392
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 113/252 (44%), Gaps = 27/252 (10%)
Query: 98 DVIRNKWETDVFVGAAL--IDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIA 155
D++R+K +++ A L IDM +L P ++ A AD+
Sbjct: 63 DLLRSKVRSNLLREAVLTYIDMI---------------VLGIKPDNFAFPALLKAVADLQ 107
Query: 156 ALPQGRELHGFSWRHRFELN-VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
+ G+++H ++ + ++ V V LV++Y KCG +F+++ E+ VSWN++I
Sbjct: 108 DMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLI 167
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDE---GRMFFESMVRD 270
+ AL+ F M DE V+P T V V ACS + + G+ +R
Sbjct: 168 SSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRK 227
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS-CKLHGHVKLAE 329
++ + +V + G G+L + L+ + D W +L+S C+ ++ E
Sbjct: 228 GELNSFI--INTLVAMYGKMGKLASSKVLLGSFEGR-DLVTWNTVLSSLCQNEQFLEALE 284
Query: 330 LALEKLIE-LEP 340
E ++E +EP
Sbjct: 285 YLREMVLEGVEP 296
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/548 (41%), Positives = 318/548 (58%), Gaps = 38/548 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GFGF + T L+ LYS C ++ A LF RI + +L +N +I + NG E +++L
Sbjct: 238 IGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKL 297
Query: 61 YYRLLE----------IGLVPDNFTFPFALKACS------------------ALSAIEEG 92
+ LL +GL+P + F ACS A +AI
Sbjct: 298 FRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYN- 356
Query: 93 RRIHE-DVIRNKW----ETDVFVGAALIDMYAKCSCVVNARQVFDKIL--ERDPSEATLV 145
+++E D+ R+ + E V A+I Y + A +F +++ E P+ T+
Sbjct: 357 -KLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTIT 415
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
T++SA A + +L G+ +H E N+ V TALVDMYAKCG + A LF+ + EK
Sbjct: 416 TILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEK 475
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFF 264
V+WN MI GY +HG+ +AL L+ +M P +TF+ VL ACS GL EG F
Sbjct: 476 NTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIF 535
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+MV Y I+P ++HY CMVD+LG SG+L++A + I +M V+P P VWG LL +C +H
Sbjct: 536 HNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKD 595
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
+A LA E+L EL+P G YV+LSNIY+ N+ A +R+++ R + KS C+ IE
Sbjct: 596 TDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIE 655
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
V H F+SGD SH + +IYAKL+ L G+M+E GY T HDVE +EK + H
Sbjct: 656 VNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHDVEEEEKELAVNVH 715
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SE+LAIAFGLI T G + I KNL++C DCH A KFISKITER I VRD NR+HHFKDG
Sbjct: 716 SEKLAIAFGLITTEPGNEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDG 775
Query: 505 ICSCGDYW 512
ICSCGDYW
Sbjct: 776 ICSCGDYW 783
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 183/427 (42%), Gaps = 74/427 (17%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ F TKL +A LF +P+ ++FL+NVL+R ++ N +I LY
Sbjct: 39 GYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLY 98
Query: 62 YRLL-EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
L L PDNFT+ FA+ ACS + +H I + + ++VFVG+AL+D+Y K
Sbjct: 99 THLRRNTNLSPDNFTYAFAVAACSNDKHL---MLLHAHSIIDGYGSNVFVGSALVDLYCK 155
Query: 121 CSCVVNARQVFDKILERDP---------------------------------SEATLVTV 147
S VV AR+VFD + ERD +T+ V
Sbjct: 156 FSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAV 215
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A+A++ L G + + + F V T L+ +Y+KCG V AR LF ++ +
Sbjct: 216 LPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDL 275
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKM---KDEVQ--------PDHITFVGVLSACSRGGL 256
+++NAMI+G+ +G + ++ LF ++ + V P H F + ACS G
Sbjct: 276 IAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGF 335
Query: 257 FDEGRMFFESMVR--------------------DYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+ + V D + +V + M+ +G + A
Sbjct: 336 CVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETA 395
Query: 297 CDL---IMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYV--ILSN 351
L +M+ P+ +L++C G + + + LI+ E + YV L +
Sbjct: 396 ISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKW-VHHLIKSENLEPNIYVSTALVD 454
Query: 352 IYARAAN 358
+YA+ N
Sbjct: 455 MYAKCGN 461
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/524 (42%), Positives = 309/524 (58%), Gaps = 36/524 (6%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+A +FD +PQRNL WN I + AI + L + P++ TF L AC
Sbjct: 161 DACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACV 220
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER------- 137
+ + GR++H ++R ++ DV V LID Y KC +V+A VF++I R
Sbjct: 221 DMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWC 280
Query: 138 --------------------------DPSEATLVTVISASADIAALPQGRELHGFSWRHR 171
+P++ + +V+SA A++ L GR +H + +
Sbjct: 281 SMLAALVQNHEEERACMVFLQARKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKAC 340
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
E N+ V +ALVDMY KCG ++ A +F +L E+ +V+WNAMI GYA G AL LFE
Sbjct: 341 VEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFE 400
Query: 232 KM---KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
+M ++P ++T + +LS CSR G + G FESM +Y I+P +H+ C+VDLLG
Sbjct: 401 EMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLG 460
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
SG +D A + I M ++P VWGALL +C++HG +L ++A EKL EL+ D+GN+V+
Sbjct: 461 RSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVV 520
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAK 408
LSN+ A A WE +RK M D GIKK++ SWI VKN+ H F + D+SH EI A
Sbjct: 521 LSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAM 580
Query: 409 LKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKN 468
L L G MKEAGYVP T D+E++EKA+ + HSE++A+AFGLI P G + ITKN
Sbjct: 581 LGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQGVPIRITKN 640
Query: 469 LKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+IC DCH AIKFIS+I REI VRD +R+H FKDG CSC DYW
Sbjct: 641 LRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 684
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 173/405 (42%), Gaps = 40/405 (9%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L+ LV++YS D L++A + R + W LI N + A+ + +
Sbjct: 44 LSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDN 103
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P++FTFP KA + + G++IH ++ DVFVG + DMY K +A
Sbjct: 104 VQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDAC 163
Query: 129 QVFDKILER---------------------------------DPSEATLVTVISASADIA 155
+FD++ +R +P+ T ++A D+
Sbjct: 164 NMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMV 223
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL-REKRVVSWNAMI 214
L GR+LH F R ++ +V V L+D Y KCG + A +F ++ K VVSW +M+
Sbjct: 224 RLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSML 283
Query: 215 TGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
+ +A +F + + EV+P VLSAC+ G + GR V+ ++
Sbjct: 284 AALVQNHEEERACMVFLQARKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKAC-VE 342
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
++ + +VD+ G G ++ A + ++ + + W A++ G + +A E+
Sbjct: 343 DNIFVGSALVDMYGKCGSIENAEQVFSELPER-NLVTWNAMIGGYAHQGDIDMALRLFEE 401
Query: 335 LI----ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIK 375
+ + P ILS A G+ + ++ GI+
Sbjct: 402 MTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIE 446
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 136/329 (41%), Gaps = 44/329 (13%)
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWET-DVFVGAALIDMYAKCSCVVNARQ 129
P N A S +I GR IH +IR F+ L++MY+K + +A+
Sbjct: 5 PQNLLGSLLESAVSTHCSIL-GRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQH 63
Query: 130 VFDKI------------------------------LERD---PSEATLVTVISASADIAA 156
V + RD P++ T V ASA +
Sbjct: 64 VLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQI 123
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
G+++HG + + +V V + DMY K G A N+F+++ ++ + +WNA I+
Sbjct: 124 PMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISN 183
Query: 217 YAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHID 274
S A+ F E + +P+ ITF L+AC + GR +VR Y D
Sbjct: 184 AVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKED 243
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS-CKLHGHVKLAELALE 333
SV + ++D G G + A + ++ + + W ++L + + H + + L+
Sbjct: 244 VSVANG--LIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQ 301
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGV 362
E+EP D ++S++ + A G+
Sbjct: 302 ARKEVEPTD----FMISSVLSACAELGGL 326
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/545 (39%), Positives = 317/545 (58%), Gaps = 35/545 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F ++ ++ L+ YS D + +A +LFD +P+++ +NV+I YAW+G ++ A +L+
Sbjct: 281 FVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFR 340
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
L F F L S E GR+IH I ++++ VG +L+DMYAKC
Sbjct: 341 ELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCG 400
Query: 123 CVVNARQVFDKILERDP---------------------------------SEATLVTVIS 149
A +F + R +AT +++
Sbjct: 401 KFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLR 460
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
ASA IA+L G++LH F + F NV +AL+D+YAKCG +K A F+++ ++ +VS
Sbjct: 461 ASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVS 520
Query: 210 WNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WNAMI+ YA +G + L F++M +QPD ++F+GVLSACS GL +EG F SM
Sbjct: 521 WNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMT 580
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ Y +DP +HY +VD+L SGR +EA L+ +M + PD +W ++LN+C++H + +LA
Sbjct: 581 QIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELA 640
Query: 329 ELALEKLIELEP-HDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
A ++L +E DA YV +SNIYA A WE V+K+ K M DRG+KK A SW+E+K+
Sbjct: 641 RRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKH 700
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ H F + D HP +EI K+ L M+E GY P T H+ + K + HSER
Sbjct: 701 ETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSER 760
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAF LI+TP+G+ +L+ KNL+ C DCH AIK ISKI REITVRD R+HHF+DG CS
Sbjct: 761 LAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCS 820
Query: 508 CGDYW 512
CGD+W
Sbjct: 821 CGDFW 825
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 169/374 (45%), Gaps = 43/374 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G+ ++ LV Y + L A QLF +P+ + +N +I Y+ +G E A+ L
Sbjct: 178 LGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNL 237
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + GL P FTF L A L I G++IH VI+ + +VFV AL+D Y+K
Sbjct: 238 FVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSK 297
Query: 121 CSCVVNARQVFDKILERDPSEATLV---------------------------------TV 147
V++AR++FD++ E+D ++ T+
Sbjct: 298 HDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATM 357
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+S +++ GR++H + + + V +LVDMYAKCG + A +F L +
Sbjct: 358 LSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSA 417
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V W AMI+ Y G + L LF KM+ V D TF +L A + G+
Sbjct: 418 VPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSF 477
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGH 324
+++ + +V + ++D+ G + +A +M PD + W A++++ +G
Sbjct: 478 IIKSGFMS-NVFSGSALLDVYAKCGSIKDAVQTFQEM---PDRNIVSWNAMISAYAQNGE 533
Query: 325 VKLAELALEKLIEL 338
AE L+ E+
Sbjct: 534 ---AEATLKSFKEM 544
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 149/347 (42%), Gaps = 36/347 (10%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
+ V ++ Y L A +LFD + +R W +LI Y+ ++ A EL+ ++
Sbjct: 82 NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQ 141
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G PD TF L C+ + ++ +I+ +++ + VG L+D Y K + +
Sbjct: 142 RCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLD 201
Query: 126 NARQVFDKILERD---------------------------------PSEATLVTVISASA 152
A Q+F ++ E D P+E T V+ A+
Sbjct: 202 LACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANI 261
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+ + G+++H F + F NV V AL+D Y+K V AR LF+++ E+ VS+N
Sbjct: 262 GLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNV 321
Query: 213 MITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
+I+GYA G A DLF +++ F +LS S ++ GR +
Sbjct: 322 IISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTT 381
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
D + +VD+ G+ +EA ++I W A++++
Sbjct: 382 -ADSEILVGNSLVDMYAKCGKFEEA-EMIFTNLTHRSAVPWTAMISA 426
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + L+ +Y+ C + +A Q F +P RN+ WN +I AYA NG E ++ +
Sbjct: 482 GFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSF 541
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
++ GL PD+ +F L ACS +EEG
Sbjct: 542 KEMVLSGLQPDSVSFLGVLSACSHSGLVEEG 572
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
N ++ Y K G + AR LF+ + E+ V+W +I GY+ +A +LF +M+
Sbjct: 82 NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQ 141
Query: 235 D-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
+PD++TFV +LS C+ G ++ + D + +VD S RL
Sbjct: 142 RCGTEPDYVTFVTLLSGCN-GHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRL 200
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
D AC L +M + D + A++ G L E A+ +E++
Sbjct: 201 DLACQLFKEMP-EIDSVSYNAMITGYSKDG---LDEKAVNLFVEMQ 242
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/542 (40%), Positives = 332/542 (61%), Gaps = 37/542 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V T L+ Y++ + +A ++FD I +R++ WN +I Y N YE A+EL+ ++
Sbjct: 150 VSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRT 209
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVI-RNKWETDVFVGAALIDMYAKCSCVVN 126
+ PD T L AC+ +IE GR IH V + + + + + A I +Y+KC V
Sbjct: 210 NVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEI 269
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISASAD 153
A +F+ + +D P++ T+++V+ A A
Sbjct: 270 ASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAH 329
Query: 154 IAALPQGRELHGF-SWRHRFELN-VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+ A+ GR +H + R + N ++T+L+DMYAKCG ++ A +F + K + SWN
Sbjct: 330 LGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWN 389
Query: 212 AMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
AMI G+AMHG + A DLF +M K+ ++PD IT VG+LSACS GL D GR F+S+ +D
Sbjct: 390 AMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQD 449
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
Y+I P ++HY CM+DLLGH+G EA ++I M ++PD +W +LL +CK+HG+++LAE
Sbjct: 450 YNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAES 509
Query: 331 ALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAH 390
+KL+E+EP ++G+YV+LSNIYA A WE VA++R+++ +G+KK CS IE+ + H
Sbjct: 510 FAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVH 569
Query: 391 AFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAI 450
F+ GD HP EIY L+ ++ ++EAG+VP T V ++E + K + HSE+LAI
Sbjct: 570 EFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAI 629
Query: 451 AFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGD 510
AFGLI+T GT+L + KNL++C +CH A K ISKI +REI RD R+HHF+DG+CSC D
Sbjct: 630 AFGLISTKPGTKLTVVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCD 689
Query: 511 YW 512
YW
Sbjct: 690 YW 691
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 156/314 (49%), Gaps = 44/314 (14%)
Query: 21 DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
D L A +F+ + NL +WN ++R A + +E+Y R++ G VP+ +TFPF L
Sbjct: 31 DGLPYAVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLL 90
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPS 140
K+C+ EEGR+IH V++ E D + +LI MYA+ + +AR+VFD +RD
Sbjct: 91 KSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRD-- 148
Query: 141 EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
V+S TAL+ YA G V+ AR +F+
Sbjct: 149 ------VVSC-----------------------------TALITGYASRGDVRSARKVFD 173
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDE 259
+ E+ VVSWNAMITGY + +AL+LF E M+ V+PD T V VLSAC++ G +
Sbjct: 174 XITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIEL 233
Query: 260 GRMFFESMVRDYH-IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
GR ++V D+H S++ + L G ++ A L + K D W L+
Sbjct: 234 GRE-IHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCK-DVVSWNTLIGG 291
Query: 319 CKLHGHVKLAELAL 332
+ H+ L + AL
Sbjct: 292 ---YTHMNLYKEAL 302
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 123/280 (43%), Gaps = 44/280 (15%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + + LYS C + A LF+ + +++ WN LI Y Y+ A+ L+
Sbjct: 246 GFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLF 305
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAA----LIDM 117
+L G P++ T L AC+ L AI+ GR IH V +K V G+A LIDM
Sbjct: 306 QEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIH--VYIDKRLKGVTNGSALRTSLIDM 363
Query: 118 YAKCSCVVNARQVFDKILER---------------------------------DPSEATL 144
YAKC + A QVF+ ++ + +P + TL
Sbjct: 364 YAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITL 423
Query: 145 VTVISASADIAALPQGRELHGFSWRHRFELNVKVK--TALVDMYAKCGLVKVARNLFEQL 202
V ++SA + L GR + S + + K++ ++D+ GL K A + +
Sbjct: 424 VGLLSACSHSGLLDLGRHIFK-SVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMM 482
Query: 203 -REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDH 241
E V W +++ MHG+ A +K+ E++P++
Sbjct: 483 PMEPDGVIWCSLLKACKMHGNLELAESFAQKLM-EIEPEN 521
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/541 (39%), Positives = 320/541 (59%), Gaps = 34/541 (6%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
H L+ + Y+ C L++A ++F I + + WN LI +A NG A+ L +++
Sbjct: 384 HVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMT 443
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G PD FT L AC+ L +++ G+ IH V+RN ETD FVG +L+ Y C
Sbjct: 444 YSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKAS 503
Query: 126 NARQVFDKILERD---------------------------------PSEATLVTVISASA 152
+AR +FD++ +++ E +V+V A +
Sbjct: 504 SARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACS 563
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
++AL G+E HG+ + + V +++DMYAK G +K +R +F+ L++K V SWNA
Sbjct: 564 QLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNA 623
Query: 213 MITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
+I + +HGH +A++L+E+MK Q PD T++G+L AC GL +EG +F+ M
Sbjct: 624 IIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFN 683
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
I+P ++HY C++D+L +GRLD+A L+ +M + D +W +LL SC+ G +++ E
Sbjct: 684 LIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKV 743
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHA 391
+KL+ELEP A NYV+LSN+YA W+GV ++R++M + G++K CSWIEV + ++
Sbjct: 744 AKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYS 803
Query: 392 FLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIA 451
F+ GD+ P EI + LE R+ E GY P T SV H+V +EK +++ HSE+LAI+
Sbjct: 804 FVVGDSLQPKSAEIRVIWRRLEERISEIGYKPNTSSVLHEVGEEEKIDILRGHSEKLAIS 863
Query: 452 FGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
FGL+ T GT L I KNL+IC DCH A K ISK EREI VRD R+HHF+DG+CSC DY
Sbjct: 864 FGLLKTTKGTTLRIYKNLRICADCHNAAKLISKAVEREIVVRDNKRFHHFRDGLCSCCDY 923
Query: 512 W 512
W
Sbjct: 924 W 924
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 139/282 (49%), Gaps = 38/282 (13%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-E 66
VL T+L+ +Y+ C ++ +FD + +NL WN L+ Y NG Y ++++ L+ +
Sbjct: 80 VLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSD 139
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
PDNFTFP +KAC + + G IH VI+ DVFVG AL+ MY KC V
Sbjct: 140 TDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDE 199
Query: 127 ARQVFDKILE-------------------RD---------------PSEATLVTVISASA 152
A +VFD + E RD P T+VT++ A
Sbjct: 200 AMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCA 259
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+ G +HG + + V V A+V MY+KCG + A+ F + K VVSWN
Sbjct: 260 GEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNT 319
Query: 213 MITGYAMHGHSTKALDLFEKMK---DEVQPDHITFVGVLSAC 251
MI+ +++ G +A +L ++M+ +E++ + +T + VL AC
Sbjct: 320 MISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPAC 361
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 166/366 (45%), Gaps = 52/366 (14%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG + LV +Y C + A ++FD +P+ NL WN +I A++ NG + +L
Sbjct: 175 MGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDL 234
Query: 61 YYRLL-EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
+L E GL+PD T L C+ ++ G IH ++ +V V A++ MY+
Sbjct: 235 LMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYS 294
Query: 120 KCSCVVNARQVFDK----------------ILERDPSEA-------------------TL 144
KC + A+ F K LE D +EA T+
Sbjct: 295 KCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTI 354
Query: 145 VTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE 204
+ V+ A D L +ELHG+S+RH F+ +V++ A + YAKCG + A +F + +
Sbjct: 355 LNVLPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFILAYAKCGALNSAEKVFHGIGD 413
Query: 205 KRVVSWNAMITGYAMHGHSTKALD-LFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMF 263
K V SWNA+I G+A +G KAL LF+ QPD T +L AC+ G+
Sbjct: 414 KTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEI 473
Query: 264 FESMVR-----DYHIDPS-VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
++R D+ + S + HY H G+ A L +M+ K + W A+++
Sbjct: 474 HGYVLRNGLETDFFVGTSLLSHYI-------HCGKASSARVLFDRMKDK-NLVSWNAMIS 525
Query: 318 SCKLHG 323
+G
Sbjct: 526 GYSQNG 531
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 131/309 (42%), Gaps = 40/309 (12%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNK-WETDVFVGAALIDMYAKCSCVVNARQVFDKILERD 138
L+AC IE GRR+H+ V + + D + LI MYA C +++R VFD + ++
Sbjct: 50 LQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKN 109
Query: 139 ----------------------------------PSEATLVTVISASADIAALPQGRELH 164
P T +VI A I + G +H
Sbjct: 110 LIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIH 169
Query: 165 GFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST 224
G + L+V V ALV MY KCG V A +F+ + E +VSWN+MI ++ +G S
Sbjct: 170 GMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSR 229
Query: 225 KALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTC 282
+ DL +M E + PD +T V +L C+ G D G M + + V
Sbjct: 230 DSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIG-MGIHGLAVKLGLSEEVMVNNA 288
Query: 283 MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA-ELALEKLIELEPH 341
MV + G L+EA ++ K + W ++++ L G V A L E I+ E
Sbjct: 289 MVYMYSKCGYLNEAQMSFVKNNNK-NVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEM 347
Query: 342 DAGNYVILS 350
A IL+
Sbjct: 348 KANEVTILN 356
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/545 (42%), Positives = 319/545 (58%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + T LV LYS L +A ++FD IP++N+ W +I Y +G + A+ L+
Sbjct: 132 GFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLF 191
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
LLE+GL PD+FT L ACS + + GR I + + +VFV +L+DMYAKC
Sbjct: 192 RGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKC 251
Query: 122 SCVVNARQVFDKILERD----------------PSEA-----------------TLVTVI 148
+ AR+VFD ++E+D P EA +V V
Sbjct: 252 GSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVF 311
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA + + AL G G F N + TAL+D YAKCG V A+ +F+ +R K V
Sbjct: 312 SACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCV 371
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+NA+I+G AM GH A +F +M K +QPD TFVG+L C+ GL D+G +F M
Sbjct: 372 VFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGM 431
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ + P+++HY CMVDL +G L EA DLI M ++ + VWGALL C+LH +L
Sbjct: 432 SSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQL 491
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE L++LIELEP ++G+YV+LSNIY+ + W+ K+R + +G++K CSW+EV
Sbjct: 492 AEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDG 551
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
H FL GD SHP +IY KL+ L ++EAGY P TE V DVE +EK + CHSE+
Sbjct: 552 VVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEK 611
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+AF LI+T + + KNL++C DCH AIK +SK+T REI VRD NR+HHF +G CS
Sbjct: 612 LAVAFALISTGAKDVIRVVKNLRVCGDCHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCS 671
Query: 508 CGDYW 512
C DYW
Sbjct: 672 CRDYW 676
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 119/358 (33%), Positives = 181/358 (50%), Gaps = 37/358 (10%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +F + P N+FL+N LIR N + A+ +Y + + G PDNFTFPF LKAC+
Sbjct: 54 ATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTR 113
Query: 86 LS-AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------ 138
L G +H VI+ ++ DVFV L+ +Y+K + +AR+VFD+I E++
Sbjct: 114 LPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTA 173
Query: 139 ---------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHR 171
P TLV ++ A + + L GR + G+
Sbjct: 174 IICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESG 233
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
NV V T+LVDMYAKCG ++ AR +F+ + EK VV W+A+I GYA +G +ALD+F
Sbjct: 234 SVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFF 293
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+M+ E V+PD VGV SACSR G + G M D + V T ++D
Sbjct: 294 EMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLG-TALIDFYAKC 352
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
G + +A ++ MR K D V+ A+++ + GHV A +++++ GN +
Sbjct: 353 GSVAQAKEVFKGMRRK-DCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFV 409
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/546 (39%), Positives = 317/546 (58%), Gaps = 35/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
F ++ ++ L+ YS D + +A +LFD +P+++ +NV+I YAW+G ++ A +L+
Sbjct: 240 NFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLF 299
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
L F F L S E GR+IH I ++++ VG +L+DMYAKC
Sbjct: 300 RELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKC 359
Query: 122 SCVVNARQVFDKILERDP---------------------------------SEATLVTVI 148
A +F + R +AT +++
Sbjct: 360 GKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLL 419
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
ASA IA+L G++LH F + F NV +AL+D+YAKCG +K A F+++ ++ +V
Sbjct: 420 RASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIV 479
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNAMI+ YA +G + L F++M +QPD ++F+GVLSACS GL +EG F SM
Sbjct: 480 SWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSM 539
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ Y +DP +HY +VD+L SGR +EA L+ +M + PD +W ++LN+C++H + +L
Sbjct: 540 TQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQEL 599
Query: 328 AELALEKLIELEP-HDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
A A ++L +E DA YV +SNIYA A WE V+K+ K M DRG+KK A SW+E+K
Sbjct: 600 ARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIK 659
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
++ H F + D HP +EI K+ L M+E GY P T H+ + K + HSE
Sbjct: 660 HETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSE 719
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
RLAIAF LI+TP+G+ +L+ KNL+ C DCH AIK ISKI REITVRD R+HHF+DG C
Sbjct: 720 RLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFC 779
Query: 507 SCGDYW 512
SCGD+W
Sbjct: 780 SCGDFW 785
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 146/314 (46%), Gaps = 5/314 (1%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
+ V ++ Y L A +LFD + +R W +LI Y+ ++ A EL+ ++
Sbjct: 77 NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQ 136
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G PD TF L C+ + ++ +I+ +++ + VG L+D Y K + +
Sbjct: 137 RCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLD 196
Query: 126 NARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
A Q+F ++ E D T V+ A+ + + G+++H F + F NV V AL+D
Sbjct: 197 LACQLFKEMPEID--SFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDF 254
Query: 186 YAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITF 244
Y+K V AR LF+++ E+ VS+N +I+GYA G A DLF +++ F
Sbjct: 255 YSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPF 314
Query: 245 VGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
+LS S ++ GR + D + +VD+ G+ +EA ++I
Sbjct: 315 ATMLSIASNTLDWEMGRQIHAQTIVTT-ADSEILVGNSLVDMYAKCGKFEEA-EMIFTNL 372
Query: 305 VKPDPGVWGALLNS 318
W A++++
Sbjct: 373 THRSAVPWTAMISA 386
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 33/153 (21%)
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE------ 236
V + K G + AR LFE++ K VS N MI+GY G+ +A LF+ M +
Sbjct: 54 VGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWT 113
Query: 237 --------------------------VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
+PD++TFV +LS C+ G ++ +
Sbjct: 114 ILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCN-GHEMGNQITQVQTQIIK 172
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
D + +VD S RLD AC L +M
Sbjct: 173 LGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEM 205
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/547 (40%), Positives = 318/547 (58%), Gaps = 39/547 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ ++ L+++YS C L +A ++FDR+ R++ WN +I YA G A+EL+
Sbjct: 193 GYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELF 252
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+ P+ TF L AC+ L +E+GR IH V + +E+D+ +G L++MY KC
Sbjct: 253 QRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKC 312
Query: 122 SCVVN-ARQVFDKILERD---------------------------------PSEATLVTV 147
S + ARQVF+++ RD P+E TL V
Sbjct: 313 SSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNV 372
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+SA A + A QG+ +H R + +V ++ +L++MY +CG + +F +R+K +
Sbjct: 373 LSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSL 432
Query: 208 VSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSW+ +I YA HGHS L+ F E +++ + D +T V LSACS GG+ EG F S
Sbjct: 433 VSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLS 492
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
MV D+ + P +H+ CMVDLL +GRL+ A +LI M PD W +LL+ CKLH K
Sbjct: 493 MVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTK 552
Query: 327 LAELALEKLIELEPHDAGNYV-ILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
A +KL ELE D + V +LSN+YA A W+ V K R R +K+ CS+IE+
Sbjct: 553 RAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRN---RRAARKNPGCSYIEI 609
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
+ H F++GD SHP + I A++K L +MK+AGYVP V H+V+ +EK M+C HS
Sbjct: 610 NDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHS 669
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
E+LAIA+GLI+TP GT L I KNL+ C DCH A KFIS+I R+I VRD R+HHF++G
Sbjct: 670 EKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFENGS 729
Query: 506 CSCGDYW 512
CSC DYW
Sbjct: 730 CSCKDYW 736
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 199/413 (48%), Gaps = 48/413 (11%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
F +L T L+ +Y+ C L A + FD + ++ L WN LI Y+ NG + A+++Y +
Sbjct: 92 FDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDM 151
Query: 65 LEI---GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ PD TF AL AC+ + I +GR I + + + +D V ALI+MY+KC
Sbjct: 152 VSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKC 211
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +AR+VFD++ RD P+ T + ++
Sbjct: 212 GSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLL 271
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC-GLVKVARNLFEQLREKRV 207
+A ++ L QGR +H +E ++ + L++MY KC ++ AR +FE++R + V
Sbjct: 272 TACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDV 331
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
++WN +I Y +G + ALD+F++M+ + V P+ IT VLSAC+ G +G+ +
Sbjct: 332 ITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKA-VHA 390
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
++ V ++++ G LD+ + +R K W L+ + HGH
Sbjct: 391 LIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVS-WSTLIAAYAQHGH-- 447
Query: 327 LAELALEKLIEL--EPHDAGNYVILSNIYARAANW---EGVAKLRKLMIDRGI 374
+ LE EL E A + ++S + A + EGV ++ D G+
Sbjct: 448 -SRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGL 499
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 191/380 (50%), Gaps = 41/380 (10%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFT 75
+Y C + +A +F I N W +++ A+A NG Y A+ Y R++ GL PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAKCSCVVNARQVFDKI 134
F A+ CS+ +++G+ +H ++ + E D+ +G ALI MYA+C + AR+ FD++
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 135 LER------------------------------------DPSEATLVTVISASADIAALP 158
++ P T + + A + +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
QGRE+ + + + V+ AL++MY+KCG ++ AR +F++L+ + V++WN MI+GYA
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 219 MHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
G +T+AL+LF++M ++ +P+ +TF+G+L+AC+ ++GR + D + V
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLV 300
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+ S L+EA + +MR + D W L+ + +G K A L + K ++
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERMRTR-DVITWNILIVAYVQYGQAKDA-LDIFKQMQ 358
Query: 338 LEPHDAGNYVILSNIYARAA 357
LE + A N + LSN+ + A
Sbjct: 359 LE-NVAPNEITLSNVLSACA 377
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 115/237 (48%), Gaps = 13/237 (5%)
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRF-ELNVKVKTALVDMYAKCGLVKVARN 197
P A V I + L QG+ LH R E ++ + TAL+ MYA+C +++AR
Sbjct: 56 PDGAMFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARK 115
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM----KDEVQPDHITFVGVLSACSR 253
F+++ +K +V+WNA+I GY+ +G AL +++ M + ++PD ITF L AC+
Sbjct: 116 TFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTV 175
Query: 254 GGLFDEGR-MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
G +GR + ++ Y D VQ+ ++++ G L+ A + +++ + D W
Sbjct: 176 VGDISQGREIEARTVASGYASDSIVQN--ALINMYSKCGSLESARKVFDRLKNR-DVIAW 232
Query: 313 GALLNSCKLHGHVKLAELALEKLIELEPHDAG-NYVILSNIYARAANWEGVAKLRKL 368
+++ G A ALE + P+D N V + N E + + R +
Sbjct: 233 NTMISGYAKQG---AATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAI 286
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/538 (39%), Positives = 326/538 (60%), Gaps = 36/538 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T LV Y++ + +A +FD IP +++ WN +I Y G Y+ A+EL+ +++ +
Sbjct: 133 TALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVR 192
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD T + A + +IE GR++H + + + +++ + ALID Y+KC + A +
Sbjct: 193 PDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGL 252
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F + +D P++ T+++++ A A + A+
Sbjct: 253 FLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAI 312
Query: 158 PQGRELHGF-SWRHRFELNVK-VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
GR +H + R + N ++T+L+DMY+KCG ++ A +F + K + +WNAMI
Sbjct: 313 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIF 372
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+AMHG + A D+F +M K+E++PD ITFVG+LSACS G+ D GR F SM +Y I
Sbjct: 373 GFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKIT 432
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY CM+DLLGHSG EA ++I M ++PD +W +LL +CK+HG+V+L E +
Sbjct: 433 PKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQN 492
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L ++EP++ G+YV+LSNIYA A W VA++R L+ D+G+KK CS IE+ + H F+
Sbjct: 493 LFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFII 552
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD HP EIY L+ +E ++EAG+VP T V ++E + K + HSE+LAIAFGL
Sbjct: 553 GDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAIAFGL 612
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I+T T+L I KNL++C +CH A K ISKI +REI RD R+HHF+DG+CSC DYW
Sbjct: 613 ISTKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 670
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 178/371 (47%), Gaps = 71/371 (19%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +F+ I + NL +WN + R +A + A++LY ++ +GL+P+++TFPF LK+C+
Sbjct: 16 AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY--------------------------- 118
L A +EG +IH V++ +E D++V +LI MY
Sbjct: 76 LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135
Query: 119 ----AKCSCVVNARQVFDKILERD---------------------------------PSE 141
A + +AR +FD+I +D P E
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
+T+VTVISASA ++ GR++H + H F N+K+ AL+D Y+KCG ++ A LF
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLG 255
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEG 260
L K V+SWN +I GY +AL LF++M + P+ +T + +L AC+ G D G
Sbjct: 256 LSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIG 315
Query: 261 R---MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
R ++ + ++ S++ T ++D+ G ++ A + M K P W A++
Sbjct: 316 RWIHVYIDKRLKGVTNASSLR--TSLIDMYSKCGDIEAAHQVFNSMLHKSLPA-WNAMIF 372
Query: 318 SCKLHGHVKLA 328
+HG A
Sbjct: 373 GFAMHGRANAA 383
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 145/326 (44%), Gaps = 30/326 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + + L+ YS C + A LF + +++ WN+LI Y Y+ A+ L+
Sbjct: 225 GFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLF 284
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDV-IRNKWETDV-FVGAALIDMYA 119
+L G P++ T L AC+ L AI+ GR IH + R K T+ + +LIDMY+
Sbjct: 285 QEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYS 344
Query: 120 KCSCVVNARQVFDKILERD-PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
KC + A QVF+ +L + P+ ++ + GR F R N ++
Sbjct: 345 KCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAM--------HGRANAAFDIFSRMRKN-EI 395
Query: 179 K---TALVDMYAKC---GLVKVARNLFEQLREKRVVS-----WNAMITGYAMHGHSTKAL 227
K V + + C G++ + R++F + ++ + MI G +A
Sbjct: 396 KPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAE 455
Query: 228 DLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLL 287
++ M ++PD + + +L AC G + G F +++ + +P Y + ++
Sbjct: 456 EMISTMT--MEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPG--SYVLLSNIY 511
Query: 288 GHSGRLDEAC---DLIMQMRVKPDPG 310
+GR +E L+ +K PG
Sbjct: 512 ATAGRWNEVARIRGLLNDKGMKKVPG 537
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 82/183 (44%), Gaps = 8/183 (4%)
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSR 253
A ++FE ++E ++ WN M G+A+ AL L+ M + P+ TF +L +C++
Sbjct: 16 AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75
Query: 254 GGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
EG +++ Y +D V +T ++ + + RL++A + D +
Sbjct: 76 LKASKEGLQIHGHVLKLGYELDLYV--HTSLISMYVQNERLEDAHK-VFDRSSHRDVVSY 132
Query: 313 GALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDR 372
AL+ G++ E A E+ D ++ + + Y N++ +L K M+
Sbjct: 133 TALVTGYASRGYI---ESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKT 189
Query: 373 GIK 375
++
Sbjct: 190 NVR 192
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/539 (40%), Positives = 322/539 (59%), Gaps = 36/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ LV +Y+ + +FD++P +++ W +I +A NG + A+EL+ + G
Sbjct: 420 VGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEG 479
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D L ACS L I + IH +IR K +D+ + ++D+Y +C V A
Sbjct: 480 IDLDVMMISSILLACSGLKLISSVKEIHSYIIR-KGLSDLVLQNGIVDVYGECGNVDYAA 538
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
++F+ I +D P +LV+++SA+A ++
Sbjct: 539 RMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLS 598
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL +G+E+HGF R F L + + LVDMYA+CG ++ +RN+F +R K +V W +MI
Sbjct: 599 ALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMIN 658
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
Y MHG A+DLF +M+DE + PDHI FV VL ACS GL +EGR F ESM +Y ++
Sbjct: 659 AYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLE 718
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P +HY C+VDLLG + L+EA + M V+P VW ALL +C++H + +L E+A +K
Sbjct: 719 PWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQK 778
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L+E++P + GNYV++SN+Y+ W+ V +R M G+KK+ CSWIEV NK H F++
Sbjct: 779 LLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMA 838
Query: 395 GDASHPNCDEIYAKLKWLEGRM-KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
D SHP EIY+KL + ++ KE GYV T+ V H+ + +EK M+ HSERLAIA+G
Sbjct: 839 RDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYG 898
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++ TP+G L ITKNL++C DCH K ISK ERE+ +RD NR+HHFK G+CSCGD W
Sbjct: 899 MLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 957
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 155/313 (49%), Gaps = 36/313 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L+T+LV +Y C CL +A +LFD +P + +F WN +I AY NG ++ELY + G
Sbjct: 116 LSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSG 175
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D TFP LKAC L G +H I+ + + VFV +++ MY KC+ + AR
Sbjct: 176 IPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGAR 235
Query: 129 QVFDKILERD----------------------------------PSEATLVTVISASADI 154
Q+FD++ E++ P+ T V + A D
Sbjct: 236 QLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDS 295
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
+ + QG +H + + +NV V AL+ MYA+ G + A N+F + + +SWN+M+
Sbjct: 296 SFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSML 355
Query: 215 TGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+G+ +G +AL + +M+D Q PD + + +++A +R G G +++ +
Sbjct: 356 SGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKN-GL 414
Query: 274 DPSVQHYTCMVDL 286
D +Q +VD+
Sbjct: 415 DSDLQVGNSLVDM 427
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 184/360 (51%), Gaps = 41/360 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQR-NLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+A +V +Y+ C+ L+ A QLFDR+P++ ++ WN +I AY+ NG A+ L+ + +
Sbjct: 217 VANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKA 276
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
L P+ +TF AL+AC S I++G IH V+++ + +VFV ALI MYA+ + A
Sbjct: 277 SLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEA 336
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
+F + + D P ++++I+ASA
Sbjct: 337 ANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARS 396
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
G ++H ++ ++ + +++V +LVDMYAK +K +F+++ +K VVSW +I
Sbjct: 397 GNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTII 456
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
G+A +G ++AL+LF +++ E + D + +L ACS L + ++R
Sbjct: 457 AGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS 516
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
D +Q+ +VD+ G G +D A + + K D W +++ SC +H LA ALE
Sbjct: 517 DLVLQN--GIVDVYGECGNVDYAARMFELIEFK-DVVSWTSMI-SCYVHN--GLANEALE 570
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 168/350 (48%), Gaps = 39/350 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A L+ +Y+ + A +F + + WN ++ + NG Y A++ Y+ + + G
Sbjct: 319 VANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAG 378
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
PD + A + G +IH ++N ++D+ VG +L+DMYAK +
Sbjct: 379 QKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMD 438
Query: 129 QVFDKILERDPSEATLV---------------------------------TVISASADIA 155
+FDK+ ++D T + +++ A + +
Sbjct: 439 CIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLK 498
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+ +E+H + R ++ ++ +VD+Y +CG V A +FE + K VVSW +MI+
Sbjct: 499 LISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMIS 557
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD-YHI 273
Y +G + +AL+LF MK+ V+PD I+ V +LSA + +G+ ++R + +
Sbjct: 558 CYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVL 617
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+ S+ + +VD+ G L+++ ++ +R K D +W +++N+ +HG
Sbjct: 618 EGSLA--STLVDMYARCGTLEKSRNVFNFIRNK-DLVLWTSMINAYGMHG 664
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 138/295 (46%), Gaps = 46/295 (15%)
Query: 71 PDNFT----FPFALKACSALSAIEEGRRIHEDVI-RNKWETDVFVGAALIDMYAKCSCVV 125
P F+ + L+ C + A+ EG+++H +I N VF+ L+ MY KC C+V
Sbjct: 72 PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLV 131
Query: 126 NARQVFDKI--------------------------LERD------PSEA-TLVTVISASA 152
+A ++FD + L R+ P +A T ++ A
Sbjct: 132 DAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACG 191
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR-VVSWN 211
+ G E+HG + + + V V ++V MY KC + AR LF+++ EK VVSWN
Sbjct: 192 LLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWN 251
Query: 212 AMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV-- 268
+MI+ Y+ +G S +AL LF +M K + P+ TFV L AC +G MF + V
Sbjct: 252 SMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQG-MFIHATVLK 310
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
Y+I+ V + ++ + G++ EA ++ M D W ++L+ +G
Sbjct: 311 SSYYINVFVAN--ALIAMYARFGKMGEAANIFYNMD-DWDTISWNSMLSGFVQNG 362
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF LA+ LV +Y+ C L + +F+ I ++L LW +I AY +G AI+L+
Sbjct: 614 GFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLF 673
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMYA 119
R+ + + PD+ F L ACS + EGRR E ++ +++ + + A L+D+
Sbjct: 674 RRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLES-MKYEYQLEPWPEHYACLVDLLG 732
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISA 150
+ + + A Q F K +E +P+ ++ A
Sbjct: 733 RANHLEEAYQ-FVKGMEVEPTAEVWCALLGA 762
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 17/208 (8%)
Query: 128 RQVFDKILERDPSEATL----VTVISASADIAALPQGRELHGFSWRHRFELN-VKVKTAL 182
+ + D + PS+ +L +V+ AL +G+++H N V + T L
Sbjct: 61 QSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRL 120
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DH 241
V MY KCG + A LF+ + K + +WNAMI Y +G +L+L+ +M+ P D
Sbjct: 121 VFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDA 180
Query: 242 ITFVGVLSACS-----RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
TF +L AC R G G E V + S+ V + L+ A
Sbjct: 181 CTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSI------VGMYTKCNDLNGA 234
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGH 324
L +M K D W +++++ +G
Sbjct: 235 RQLFDRMPEKEDVVSWNSMISAYSSNGQ 262
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/549 (40%), Positives = 324/549 (59%), Gaps = 44/549 (8%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRI-PQRNLFLWNVLIRAYAWNGPYEVAIEL 60
G+ F + T L+ YS C + A +LF N+ W +I + N E A++L
Sbjct: 336 GYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDL 395
Query: 61 YYRLLEIGLVPDNFTFPFAL--KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
+ ++ G+ P++FT+ L K S LS ++H +I+ +E V AL+D Y
Sbjct: 396 FCQMSREGVRPNHFTYSTVLAGKPSSLLS------QLHAQIIKAYYEKVPSVATALLDAY 449
Query: 119 AKCSCVVNARQVFDKILERD---------------------------------PSEATLV 145
K VV + +VF I +D P+E T
Sbjct: 450 VKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFS 509
Query: 146 TVISA-SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE 204
+VI+A S+ A + G+++H + + + V +AL+ MY+K G ++ A +F + E
Sbjct: 510 SVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEE 569
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMF 263
+ +VSWN+MITGY HG + KAL++F+ M+++ P D +TF+GVL+AC+ GL +EG +
Sbjct: 570 RDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKY 629
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
F M++DYHID ++HY+CMVDL +G D+A D+I M P +W LL +C++H
Sbjct: 630 FNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHR 689
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
+++L +LA EKL+ L+P+DA YV+LSNI+A A NWE A +RKLM +R +KK CSWI
Sbjct: 690 NLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWI 749
Query: 384 EVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICC 443
E+KN+ +FL+GD SHP D +YAKL+ L ++K+ GY P T VFHDVE + K ++
Sbjct: 750 EIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQ 809
Query: 444 HSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKD 503
HSERLAIA+GLI P G + I KNL+IC DCH I+ IS I ER + VRD NR+HHFK
Sbjct: 810 HSERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKG 869
Query: 504 GICSCGDYW 512
G+CSCG YW
Sbjct: 870 GVCSCGGYW 878
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 181/420 (43%), Gaps = 49/420 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + T LV +Y + + +FD + +N+ W L+ YA NG + I L
Sbjct: 134 GFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLI 193
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ G+ P+ FTF L A + S IE G ++H +++N +E FV ALI MY K
Sbjct: 194 NQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKS 253
Query: 122 SCVVNARQVFDKILERDP---------------------------------SEATLVTVI 148
V +A VFD ++ RD S T +
Sbjct: 254 EMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTAL 313
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK-RV 207
+ L ++LH ++ +E ++TAL+ Y+KC V A LF V
Sbjct: 314 KLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNV 373
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V+W AMI G+ + ++ KA+DLF +M E V+P+H T+ VL+ L ++ +
Sbjct: 374 VTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL---SQLHAQI 430
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+ Y PSV T ++D +G + E+ + + K D W A+L +
Sbjct: 431 IKAYYEKVPSVA--TALLDAYVKTGNVVESARVFYSIPAK-DIVAWSAMLTGL---AQTR 484
Query: 327 LAELALEKLIEL-----EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
+E A+E I+L +P++ +++ + AA E ++ + G ++ S
Sbjct: 485 DSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVS 544
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 117/262 (44%), Gaps = 34/262 (12%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
AHQLFD P +++ +N L+ ++ N A+ L+ L GL D T ALK C
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER-------- 137
L GR++H +++ + DV VG +L+DMY K + R +FD++ +
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 138 -------------------------DPSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
+P+ T TV+ A AD + + G ++H ++ F
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
E V AL+ MY K +V A +F+ + + V+WN MI GYA G + +F +
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296
Query: 233 MK-DEVQPDHITFVGVLSACSR 253
M+ V+ F L CS+
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQ 318
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
GR++H S + F +V V T+LVDMY K + R +F+++ K VVSW ++++GYA
Sbjct: 123 GRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYAR 182
Query: 220 HGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
+G + + + L +M+ E V P+ TF VL A + + + G +V++
Sbjct: 183 NGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/538 (40%), Positives = 332/538 (61%), Gaps = 36/538 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y++ + +A ++FD IP +++ WN +I YA G + A+EL+ +++ +
Sbjct: 173 TALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVR 232
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD T + AC+ ++IE GR++H + + + +++ + ALID+Y KC V A +
Sbjct: 233 PDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGL 292
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F+ + +D P++ T+++++ A A + A+
Sbjct: 293 FEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAI 352
Query: 158 PQGRELHGF-SWRHRFELNVKV-KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
GR +H + + R + N +T+L+DMYAKCG ++ A+ +F+ + + + SWNAMI
Sbjct: 353 EIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIF 412
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+AMHG + A D+F +M K+E++PD ITFVG+LSACS G+ D GR F SM DY I
Sbjct: 413 GFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKIT 472
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY CM+DLLGHSG EA ++I M ++PD +W +LL +CK++ +V+L E +
Sbjct: 473 PKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQN 532
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
LI++EP + G+YV+LSNIYA A W VAK+R L+ D+G+KK CS IE+ + H F+
Sbjct: 533 LIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFII 592
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD HP EIY L+ +E ++EAG+VP T V ++E + K + HSE+LAIAFGL
Sbjct: 593 GDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGL 652
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I+T GT+L I KNL++C +CH A K ISKI +REI RD R+HHF+DG+CSC DYW
Sbjct: 653 ISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 183/392 (46%), Gaps = 73/392 (18%)
Query: 21 DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
D L A +F+ I + NL +WN + R +A + A+ LY ++ +GL+P+ +TFPF L
Sbjct: 51 DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLL 110
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY---------------------- 118
K+C+ A EG++IH V++ ++ D++V +LI MY
Sbjct: 111 KSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVV 170
Query: 119 ---------AKCSCVVNARQVFDKILERD------------------------------- 138
A + +A+++FD+I +D
Sbjct: 171 SYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTN 230
Query: 139 --PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
P E+T+V+V+SA A A++ GR++H + H F N+K+ AL+D+Y KCG V+ A
Sbjct: 231 VRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETAC 290
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGG 255
LFE L K V+SWN +I GY +AL LF++M + P+ +T + +L AC+ G
Sbjct: 291 GLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLG 350
Query: 256 LFDEGR---MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
+ GR ++ ++ + + H T ++D+ G + EA + + W
Sbjct: 351 AIEIGRWIHVYINKRLKG--VANASSHRTSLIDMYAKCGDI-EAAQQVFDSILNRSLSSW 407
Query: 313 GALLNSCKLHGHVKLAELALEKLI--ELEPHD 342
A++ +HG A ++ E+EP D
Sbjct: 408 NAMIFGFAMHGRANAAFDIFSRMRKNEIEPDD 439
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 148/329 (44%), Gaps = 45/329 (13%)
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
++ ++++ GL N+ ++ C LS +G V E ++ + + +A
Sbjct: 21 IHAQMIKTGLHNTNYALSKLIEFC-VLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHA 79
Query: 120 KCSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
S V+A ++ ++ P+ T ++ + A A +G+++HG + ++L++
Sbjct: 80 LSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLY 139
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH--------------- 222
V T+L+ MY + G ++ AR +F+Q + VVS+ A+ITGYA G+
Sbjct: 140 VHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKD 199
Query: 223 ----------------STKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+ +AL+LF E MK V+PD T V V+SAC++ + GR
Sbjct: 200 VVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQ-VH 258
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
S + D+ +++ ++DL G ++ AC L + K D W L+ + H+
Sbjct: 259 SWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYK-DVISWNTLIGG---YTHM 314
Query: 326 KLAELALEKLIEL-----EPHDAGNYVIL 349
L + AL E+ P+D IL
Sbjct: 315 NLYKEALLLFQEMLRSGESPNDVTMLSIL 343
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/547 (40%), Positives = 318/547 (58%), Gaps = 39/547 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ ++ L+++YS C L +A ++FDR+ R++ WN +I YA G A+EL+
Sbjct: 193 GYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELF 252
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+ P+ TF L AC+ L +E+GR IH V + +E+D+ +G L++MY KC
Sbjct: 253 QRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKC 312
Query: 122 SCVVN-ARQVFDKILERD---------------------------------PSEATLVTV 147
S + ARQVF+++ RD P+E TL V
Sbjct: 313 SSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNV 372
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+SA A + A QG+ +H R + +V ++ +L++MY +CG + +F +R+K +
Sbjct: 373 LSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSL 432
Query: 208 VSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSW+ +I YA HGHS L+ F E +++ + D +T V LSACS GG+ EG F S
Sbjct: 433 VSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLS 492
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
MV D+ + P +H+ CMVDLL +GRL+ A +LI M PD W +LL+ CKLH K
Sbjct: 493 MVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTK 552
Query: 327 LAELALEKLIELEPHDAGNYV-ILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
A +KL ELE D + V +LSN+YA A W+ V K R R +K+ CS+IE+
Sbjct: 553 RAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRN---RRAARKNPGCSYIEI 609
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
+ H F++GD SHP + I A++K L +MK+AGYVP V H+V+ +EK M+C HS
Sbjct: 610 NDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHS 669
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
E+LAIA+GLI+TP GT L I KNL+ C DCH A KFIS+I R+I VRD R+HHF++G
Sbjct: 670 EKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFENGS 729
Query: 506 CSCGDYW 512
CSC DYW
Sbjct: 730 CSCKDYW 736
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 198/413 (47%), Gaps = 48/413 (11%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
F +L T L+ +Y+ C L A + FD + ++ L WN LI Y+ NG + A+++Y +
Sbjct: 92 FDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDM 151
Query: 65 LEI---GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ PD TF AL ACS + I +GR I + + + +D V ALI+MY+KC
Sbjct: 152 VSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKC 211
Query: 122 SCVVNARQVFDKI-------------------------------LERDPSE--ATLVTVI 148
+ +AR+VFD++ DP T + ++
Sbjct: 212 GSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLL 271
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC-GLVKVARNLFEQLREKRV 207
+A ++ L QGR +H H +E ++ + L++MY KC ++ AR +FE+LR + V
Sbjct: 272 TACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDV 331
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
++WN +I Y +G + ALD+F++M+ + V P+ IT VLSAC+ G +G+ +
Sbjct: 332 ITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKA-VHA 390
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
++ V ++++ G LD+ + +R K W L+ + HGH
Sbjct: 391 LIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVS-WSTLIAAYAQHGH-- 447
Query: 327 LAELALEKLIEL--EPHDAGNYVILSNIYARAANW---EGVAKLRKLMIDRGI 374
+ LE EL E A + ++S + A + EGV ++ D G+
Sbjct: 448 -SRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGL 499
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 197/381 (51%), Gaps = 43/381 (11%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFT 75
+Y C + +A +F I N W +++ A+A NG Y A+ Y R++ GL PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNK-WETDVFVGAALIDMYAKCSCVVNARQVFDKI 134
F A+ CS+ +++G+ +H ++ + E D+ +G ALI MYA+C + AR+ FD++
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 135 LER------------------------------------DPSEATLVTVISASADIAALP 158
++ P T + + A + + +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
QGRE+ + + + V+ AL++MY+KCG ++ AR +F++L+ + V++WN MI+GYA
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 219 MHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
G +T+AL+LF++M ++ +P+ +TF+G+L+AC+ ++GR V+++ + +
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRK-VKEHGYESDL 299
Query: 278 QHYTCMVDLLGH-SGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
++++ S L+EA + ++R + D W L+ + +G K A L + K +
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERLRTR-DVITWNILIVAYVQYGQAKDA-LDIFKQM 357
Query: 337 ELEPHDAGNYVILSNIYARAA 357
+LE + A N + LSN+ + A
Sbjct: 358 QLE-NVAPNEITLSNVLSACA 377
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 119/245 (48%), Gaps = 15/245 (6%)
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRF-ELNVKVKTALVDMYAKCGLVKVARN 197
P A V I + L QG+ LH + E ++ + TAL+ MYA+C +++AR
Sbjct: 56 PDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARK 115
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM----KDEVQPDHITFVGVLSACSR 253
F+++ +K +V+WNA+I GY+ +G AL +++ M + ++PD ITF L ACS
Sbjct: 116 TFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSV 175
Query: 254 GGLFDEGR-MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
G +GR + ++ Y D VQ+ ++++ G L+ A + +++ + D W
Sbjct: 176 VGDISQGREIEARTVASGYASDSIVQN--ALINMYSKCGSLESARKVFDRLKNR-DVIAW 232
Query: 313 GALLNSCKLHGHVKLAELALEKLIELEPHDAG-NYVILSNIYARAANWEGVAKLRKLMID 371
+++ G A ALE + P+D N V + N E + + R I
Sbjct: 233 NTMISGYAKQG---AATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRA--IH 287
Query: 372 RGIKK 376
R +K+
Sbjct: 288 RKVKE 292
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/545 (39%), Positives = 317/545 (58%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G ++T L+ +YS + A LF +L WN ++ Y +G + A+ LY
Sbjct: 1067 GVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLY 1126
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ E G D T A KA L +++G++IH V++ + D+FV + ++DMY KC
Sbjct: 1127 ILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKC 1186
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +AR+VF +I D P E T T++
Sbjct: 1187 GEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLV 1246
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A + + AL QGR++H + + V T+LVDMYAKCG ++ AR LF++ +R+
Sbjct: 1247 KACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIA 1306
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNAMI G A HG++ +AL F+ MK V PD +TF+GVLSACS GL E F SM
Sbjct: 1307 SWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSM 1366
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
++Y I+P ++HY+C+VD L +GR++EA +I M + ++ LLN+C++ +
Sbjct: 1367 QKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRET 1426
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
+ EKL+ LEP D+ YV+LSN+YA A WE VA R +M +KK SW+++KN
Sbjct: 1427 GKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKN 1486
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K H F++GD SH D IY K++++ R++E GYVP T+ DVE ++K + HSE+
Sbjct: 1487 KVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYVPDTDFALVDVEEEDKECSLYYHSEK 1546
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIA+GL+ TP T L + KNL++C DCH AIK+ISK+ +REI +RD NR+HHF++GICS
Sbjct: 1547 LAIAYGLMKTPPSTTLRVIKNLRVCGDCHSAIKYISKVFKREIVLRDANRFHHFRNGICS 1606
Query: 508 CGDYW 512
CGDYW
Sbjct: 1607 CGDYW 1611
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 174/386 (45%), Gaps = 17/386 (4%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + +A LV++Y+ + A LFD + R++ LWNV+++AY A+ L
Sbjct: 789 IGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLL 848
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR----NKWETDVFVGAALID 116
+ G PD+ T + I E ++ + + +DV V +
Sbjct: 849 FSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALS 908
Query: 117 MYAKCSCVVNARQVF-DKILERDPSEA-TLVTVISASADIAALPQGRELHGFSWRHRFEL 174
+ + A F D I R + T V +++ A + L G+++HG R +
Sbjct: 909 RFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQ 968
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF-EKM 233
V V L++MY K G V AR++F Q+ E ++SWN MI+G + G ++ +F +
Sbjct: 969 VVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLL 1028
Query: 234 KDEVQPDHITFVGVLSACS--RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
+D + PD T VL ACS GG + ++ +M +D V T ++D+ G
Sbjct: 1029 RDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVS--TALIDVYSKRG 1086
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSN 351
+++EA + + + D W A+++ + G A L L L++ E + + + L N
Sbjct: 1087 KMEEA-EFLFVNQDGFDLASWNAIMHGYIVSGDFPKA-LRLYILMQ-ESGERSDQITLVN 1143
Query: 352 IYARAANWEGVAKLRKL---MIDRGI 374
A G+ + +++ ++ RG
Sbjct: 1144 AAKAAGGLVGLKQGKQIHAVVVKRGF 1169
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 180/450 (40%), Gaps = 85/450 (18%)
Query: 37 NLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIH 96
++ +WN + + G A++ + ++ + D TF L + L+ +E G++IH
Sbjct: 899 DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIH 958
Query: 97 EDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------------------ 138
V+R+ + V VG LI+MY K V AR VF ++ E D
Sbjct: 959 GIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEE 1018
Query: 139 ---------------PSEATLVTVISASADI-AALPQGRELHGFSWRHRFELNVKVKTAL 182
P + T+ +V+ A + + ++H + + L+ V TAL
Sbjct: 1019 CSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTAL 1078
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDH 241
+D+Y+K G ++ A LF + SWNA++ GY + G KAL L+ M++ + D
Sbjct: 1079 IDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQ 1138
Query: 242 ITFVGVLSACSRGGL--FDEGR--------------MFFESMVRDYHI------------ 273
IT V A GGL +G+ +F S V D ++
Sbjct: 1139 ITLVNAAKAA--GGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVF 1196
Query: 274 ----DPSVQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWGALLNSCKLHGHVK 326
P +T M+ +G+ + A QMR V+PD + L+ +C L ++
Sbjct: 1197 SEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALE 1256
Query: 327 LAELALEKLIELE-PHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+++L D L ++YA+ N E L K R I SW
Sbjct: 1257 QGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRI-----ASW--- 1308
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGR 415
+A + G A H N E K+++ R
Sbjct: 1309 ----NAMIVGLAQHGNAKEALQFFKYMKSR 1334
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 143/340 (42%), Gaps = 30/340 (8%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEVAIE 59
G HP + L+ +Y+ C L +A +LFD P R+L WN ++ A A +
Sbjct: 686 GHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGF 745
Query: 60 LYYRLLEIGLVPDN-FTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
+RLL +V T K C ++ +H ++ + DVFV AL+++Y
Sbjct: 746 HLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIY 805
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
AK + AR +FD + RD ++ + A + + + FS HR
Sbjct: 806 AKFGLIREARVLFDGMAVRD----VVLWNVMMKAYVDTCLEYEAMLLFSEFHR----TGF 857
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKR--------------VVSWNAMITGYAMHGHST 224
+ V + +VK +N+ E + K V+ WN ++ + G +
Sbjct: 858 RPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAW 917
Query: 225 KALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
+A+D F M V D +TFV +L+ + + G+ ++R +D V C+
Sbjct: 918 EAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRS-GLDQVVSVGNCL 976
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+++ +G + A + QM + D W +++ C L G
Sbjct: 977 INMYVKAGSVSRARSVFGQMN-EVDLISWNTMISGCTLSG 1015
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 37/202 (18%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP 139
L+ A S + G+R H ++ + D FV LI MYAKC + +AR++FD + +
Sbjct: 663 LRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNR 722
Query: 140 SEAT---LVTVISASAD--------------------------------IAALPQGRE-L 163
T +++ ++A AD ++A P E L
Sbjct: 723 DLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESL 782
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
HG++ + + +V V ALV++YAK GL++ AR LF+ + + VV WN M+ Y
Sbjct: 783 HGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLE 842
Query: 224 TKALDLFEKM-KDEVQPDHITF 244
+A+ LF + + +PD +T
Sbjct: 843 YEAMLLFSEFHRTGFRPDDVTL 864
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/538 (40%), Positives = 325/538 (60%), Gaps = 39/538 (7%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+++Y LH+A +FD++P RN+ W +I AY+ + A+E +L G
Sbjct: 2 LINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREG 61
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P+ FT+ L+AC L + R++H +I+ ++DVFV +ALID+Y++ + NA
Sbjct: 62 VRPNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENAL 118
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+VFD+++ D + TL +V+ A +A
Sbjct: 119 RVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLA 178
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L GR++H + ++ ++ + AL+DMY KCG ++ A +F ++ EK V+SW+ MI
Sbjct: 179 LLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIA 236
Query: 216 GYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G A +G+S +AL LFE MK ++P+++T VGVL ACS GL +EG +F SM + ID
Sbjct: 237 GLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGID 296
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P +HY CM+DLLG +GRL EA DLI +M +PD W ALLN+C++H +V +A A ++
Sbjct: 297 PGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQ 356
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
++ L+P DAG YV+LSNIYA W VA++R+ M +RGIKK CSWIEV + HAF+
Sbjct: 357 ILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFIL 416
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD SHP EI +L L ++ GYVP T V D+E ++ + + HSE+LAI FGL
Sbjct: 417 GDRSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGL 476
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++ P G + I KNL+IC DCH+ K ++K+ +R I +RD RYHHF+DG+CSCGD+W
Sbjct: 477 MSLPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+L L+ +Y C L +A+ +F R+ ++++ W+ +I A NG + A++L+ + +
Sbjct: 198 ILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVL 257
Query: 68 GLVPDNFTFPFALKACSALSAIEEG 92
G+ P+ T L ACS +EEG
Sbjct: 258 GIKPNYVTIVGVLFACSHAGLVEEG 282
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/538 (39%), Positives = 322/538 (59%), Gaps = 34/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ LY+ C +A + F +P+ ++ W+ +I +A +G E A+E++ ++
Sbjct: 184 VGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAF 243
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
++P+ FTF L+A + + +++ + IH ++ TDVFV AL+ YAKC C+ +
Sbjct: 244 VIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSM 303
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
++F+ + +R+ +E T +++ A A +A
Sbjct: 304 ELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLA 363
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL G ++H + + + +V V AL+DMYAKCG +K AR +F+ L + VSWNA+I
Sbjct: 364 ALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIIC 423
Query: 216 GYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GY+MHG +A+ +F MK+ + +PD +TFVGVLSACS G DEG+ +F SM +DY I+
Sbjct: 424 GYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIE 483
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HYTCMV L+G SG LD+A I + +P +W ALL +C +H V+L ++ ++
Sbjct: 484 PCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQR 543
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
++ELEP D ++V+LSNIYARA W VA +RK M +G+KK SWIE + H F
Sbjct: 544 VLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTV 603
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
D SH + I L++L + ++AGY P +V DVE+DEK ++ HSERLA+AFGL
Sbjct: 604 ADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLALAFGL 663
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ P G + I KNL+IC DCH IK ISKI R+I VRD+NR+HHF++G CSC DYW
Sbjct: 664 VRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCADYW 721
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 169/358 (47%), Gaps = 38/358 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G+G + + T L+ YS C+ A ++FD I +++ W +I +YA N + A+E
Sbjct: 75 VGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEF 134
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ G P+NFTF LKAC L + G+ +H V++ +E D++VG L+++Y +
Sbjct: 135 FSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTR 194
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C +A + F + + D P++ T +V
Sbjct: 195 CGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSV 254
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ ASADI +L + +HG + + +V V AL+ YAKCG ++ + LFE L ++
Sbjct: 255 LQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRND 314
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSWN +I Y G +AL LF M + +VQ +T+ +L AC+ + G
Sbjct: 315 VSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCL 374
Query: 267 MVRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+ Y D +V + ++D+ G + +A + M D W A++ +HG
Sbjct: 375 TAKTIYGQDVAVGN--ALIDMYAKCGSIKDA-RFMFDMLDLRDKVSWNAIICGYSMHG 429
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 118/256 (46%), Gaps = 34/256 (13%)
Query: 29 LFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSA 88
+FD +P+RN + LI YA + + A EL+ RL G + F F LK ++
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 89 IEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---------- 138
E GR +H V++ + ++ F+G ALID Y+ CV AR+VFD+I +D
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 139 -----------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELN 175
P+ T V+ A + G+ +H + +E +
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD 235
+ V L+++Y +CG A F + + V+ W+ MI+ +A G S KAL++F +M+
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241
Query: 236 E-VQPDHITFVGVLSA 250
V P+ TF VL A
Sbjct: 242 AFVIPNQFTFSSVLQA 257
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 123/272 (45%), Gaps = 50/272 (18%)
Query: 113 ALIDMYAKCSCVVNARQVFDKIL----ERDPSEATLVTVISASADIAALPQGRELHGFSW 168
LI YA+ + + A ++F ++ E +P T V + S + A L GR +HG
Sbjct: 16 TLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWAEL--GRIVHGCVL 73
Query: 169 RHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALD 228
+ + N + TAL+D Y+ G V +AR +F+++ K +VSW MI YA + ++AL+
Sbjct: 74 KVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALE 133
Query: 229 LFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV-----RDYHI--------- 273
F +M+ +P++ TF GVL AC FD G+ S++ RD ++
Sbjct: 134 FFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYT 193
Query: 274 ----------------DPSVQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWGA 314
V ++ M+ SG+ ++A ++ QMR V P+ + +
Sbjct: 194 RCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSS 253
Query: 315 LLN----------SCKLHGHVKLAELALEKLI 336
+L S +HGH A L+ + +
Sbjct: 254 VLQASADIESLDLSKTIHGHALKAGLSTDVFV 285
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
+G + L+ +Y+ C + +A +FD + R+ WN +I Y+ +G AI+++
Sbjct: 380 YGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFN 439
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRR 94
+ E PD TF L ACS ++EG++
Sbjct: 440 LMKETKCKPDELTFVGVLSACSNTGRLDEGKQ 471
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/545 (38%), Positives = 322/545 (59%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF V L+ +Y+ C L A ++FD ++ WN LI Y +G Y+ +E
Sbjct: 352 GFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLE-S 410
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++++++ PD+ TF L S L+ I +GR IH DVI+ +E ++ +G +L+D+YAKC
Sbjct: 411 FKMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKC 470
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ + +VF + D P EAT++ ++
Sbjct: 471 GEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGIL 530
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+ +A QG+E+HG+ ++ FE NV + AL++MY+KCG ++ +F+ ++EK VV
Sbjct: 531 PMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVV 590
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W A+I+ + M+G KAL F+ M+ V PD + F+ + ACS G+ EG FF+ M
Sbjct: 591 TWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRM 650
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
DY+++P ++HY C+VDLL SG L +A + I+ M +KPD +WGALL++C+ G+ +
Sbjct: 651 KTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNI 710
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
A+ +K++EL D G YV++SNIYA W+ V +R M +G+KK SWIE++
Sbjct: 711 AQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQK 770
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ + F +GD S D++ L++L M + GYV + HDVE D+K +M+C HSER
Sbjct: 771 RVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSER 830
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGL+NT G+ LL+ KNL++C DCH K+I+KI +REI VRD NR+H FKDG CS
Sbjct: 831 LAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHRFKDGACS 890
Query: 508 CGDYW 512
CGD+W
Sbjct: 891 CGDHW 895
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 124/495 (25%), Positives = 218/495 (44%), Gaps = 71/495 (14%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRI-PQRNLFLWNVLIRAYAWNGPYEVAIEL 60
G + + KL+ Y+ ++ +F I P N++LWN +IRA NG + A+
Sbjct: 49 GLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGY 108
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
Y + E L PD FTFP + +C+ + +E G +HE + +E+D+++G ALIDMY++
Sbjct: 109 YTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSR 168
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ NAR VF+++ RD P T+ +V
Sbjct: 169 FVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSV 228
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A + A+ +G +HG + +V + L+ MY K ++ AR +F ++ K
Sbjct: 229 LLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDS 288
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
V+WN MI GYA G ++ LF M D PD ++ + AC + G G+
Sbjct: 289 VTWNTMICGYAQLGRHEASVKLFMDMIDGFVPDMLSITSTIRACGQSGDLQVGK-----F 343
Query: 268 VRDYHIDPSVQHYTC----MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
V Y I + T ++D+ G L A ++ + K D W +L+N G
Sbjct: 344 VHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCK-DSVTWNSLINGYTQSG 402
Query: 324 HVK--LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
+ K L + K+ E +P D+ +V+L +I+++ A+ I++G + I C
Sbjct: 403 YYKEGLESFKMMKM-ERKP-DSVTFVLLLSIFSQLAD-----------INQG--RGIHCD 447
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMI 441
I+ +A + + ++YAK ++ +K Y+ HD+ +
Sbjct: 448 VIKFGFEAELIIGN-----SLLDVYAKCGEMDDLLKVFSYMSA-----HDIISWNTVIAS 497
Query: 442 CCHSERLAIAFGLIN 456
H + + F +IN
Sbjct: 498 SVHFDDCTVGFQMIN 512
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 141/293 (48%), Gaps = 32/293 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MGF + L+ +YS L NA +F+ + R+ WN LI Y NG +E A+++
Sbjct: 150 MGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDM 209
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
Y++ G+VPD FT L AC +L A++EG +H + + DV +G L+ MY K
Sbjct: 210 YHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFK 269
Query: 121 CSCVVNARQVFDKILERD--------------------------------PSEATLVTVI 148
+ AR+VF K+ +D P ++ + I
Sbjct: 270 FERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVPDMLSITSTI 329
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A L G+ +H + FE + L+DMYAKCG + A+ +F+ + K V
Sbjct: 330 RACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSV 389
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGR 261
+WN++I GY G+ + L+ F+ MK E +PD +TFV +LS S+ ++GR
Sbjct: 390 TWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTFVLLLSIFSQLADINQGR 442
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 138 DPSE----ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVK 193
+PS+ ++L+ +S++ + PQ R +H L+V L+ YA+
Sbjct: 15 EPSQEFLRSSLLKTLSSAKNT---PQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPI 71
Query: 194 VARNLFEQLR-EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSAC 251
+ ++F + V WN++I +G T+AL + +M+++ +QPD TF V+++C
Sbjct: 72 SSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSC 131
Query: 252 SR 253
+R
Sbjct: 132 AR 133
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/538 (39%), Positives = 331/538 (61%), Gaps = 36/538 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y++ + +A ++FD IP +++ WN +I YA G Y+ A+EL+ +++ +
Sbjct: 136 TALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVR 195
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD T L AC+ ++E GR++H + + + +++ + ALID+Y+KC V A +
Sbjct: 196 PDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGL 255
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F+ + +D P++ T+V+++ A A + A+
Sbjct: 256 FEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAI 315
Query: 158 PQGRELHGFSWRHRFELN--VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
GR +H + + ++ ++T+L+DMYAKCG ++ A +F + K + SWNAMI
Sbjct: 316 DIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIF 375
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+AMHG + DLF +M K+ ++PD ITFVG+LSACS G D GR F+SM +DY I
Sbjct: 376 GFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDIT 435
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY CM+DLLGHSG EA ++I M ++PD +W +LL +C+ HG+++LAE
Sbjct: 436 PKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARN 495
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L+++EP + G+YV+LSNIYA A W+ VAK+R L+ +G+KK CS IE+ ++ H F+
Sbjct: 496 LMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIV 555
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD HP EIY L+ +E ++EAG+VP T V ++E + K + HSE+LAIAFGL
Sbjct: 556 GDKLHPRNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGL 615
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I+T GT+L I KNL++C +CH A K +SKI +REI RD R+HHF+DG+CSC D+W
Sbjct: 616 ISTKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 161/313 (51%), Gaps = 43/313 (13%)
Query: 21 DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
D A +F I + N +WN ++R YA + A++LY ++ +GL+P+++TFPF L
Sbjct: 14 DGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLL 73
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPS 140
K+C+ A EEG++IH V++ +E D++V +LI MYA+ + +A +VFD+ RD
Sbjct: 74 KSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRD-- 131
Query: 141 EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
V TAL+ YA G ++ A+ +F+
Sbjct: 132 -----------------------------------VVSYTALITGYASSGNIRSAQEMFD 156
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDE 259
++ K VVSWNAMI+GYA G +AL+LF E MK V+PD T V VLSAC++ +
Sbjct: 157 EIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVEL 216
Query: 260 GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC 319
GR S + D+ +++ ++DL G+++ AC L + K D W L+
Sbjct: 217 GRQ-VHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCK-DVVSWNTLIGG- 273
Query: 320 KLHGHVKLAELAL 332
+ H+ L + AL
Sbjct: 274 --YTHMNLYKEAL 284
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 139/309 (44%), Gaps = 29/309 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + + L+ LYS C + A LF+ + +++ WN LI Y Y+ A+ L+
Sbjct: 228 GFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLF 287
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVF----VGAALIDM 117
+L G P++ T L AC+ L AI+ GR IH V +K DV + +LIDM
Sbjct: 288 QEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIH--VYIDKKLKDVTNAPSLRTSLIDM 345
Query: 118 YAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALP-QGRELHGFSWRHRFELN- 175
YAKC + A QVF+ +L + S S +A I GR GF R N
Sbjct: 346 YAKCGDIEAAHQVFNSMLHKSLS--------SWNAMIFGFAMHGRANAGFDLFSRMRKNG 397
Query: 176 -VKVKTALVDMYAKC---GLVKVARNLFEQLRE-----KRVVSWNAMITGYAMHGHSTKA 226
V + + C G + + R++F+ + + ++ + MI G +A
Sbjct: 398 IEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEA 457
Query: 227 LDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDL 286
++ + M ++PD + + +L AC R G + F ++++ +P Y + ++
Sbjct: 458 KEMIKTMP--MEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPG--SYVLLSNI 513
Query: 287 LGHSGRLDE 295
+G DE
Sbjct: 514 YATAGEWDE 522
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/503 (42%), Positives = 311/503 (61%), Gaps = 34/503 (6%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L + ++F+ +P+R++ WN +I A NG +E A+ + + L PD+FT L
Sbjct: 146 LGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPI 205
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---- 138
+ + +G+ IH IRN ++ DVF+G++LIDMYAKC+ V ++ +VF + + D
Sbjct: 206 FAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISW 265
Query: 139 -----------------------------PSEATLVTVISASADIAALPQGRELHGFSWR 169
P+ + +++ A A + L G++LHG+ R
Sbjct: 266 NSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIR 325
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
RF+ NV + +ALVDMYAKCG ++ AR +F+++ +VSW AMI GYA+HGH+ A+ L
Sbjct: 326 SRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISL 385
Query: 230 FEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
F++M+ E V+P+++ F+ VL+ACS GL DE +F SM +DY I P ++HY + DLLG
Sbjct: 386 FKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLG 445
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
GRL+EA + I M ++P VW LL +C++H +++LAE +KL ++P + G YV+
Sbjct: 446 RVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVL 505
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAK 408
LSNIY+ A W+ KLR M D+G+KK ACSWIE+KNK HAF++GD SHP D I
Sbjct: 506 LSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEA 565
Query: 409 LKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKN 468
LK L +M+ GYV T V HDVE ++K ++C HSERLAI FG+I+TP GT + +TKN
Sbjct: 566 LKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKN 625
Query: 469 LKICDDCHIAIKFISKITEREIT 491
L++C DCH A KFISKI REI
Sbjct: 626 LRVCVDCHTATKFISKIVGREIV 648
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 128/280 (45%), Gaps = 24/280 (8%)
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC-S 122
+L G PD+ FP LK+C+ + + G +H +IR D++ AL++MY+K S
Sbjct: 1 MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWS 60
Query: 123 CVVNARQVF--DKILERDPSEATLVTVISASAD--------IAALPQGRELHGFSWRHRF 172
Q F K+L P E + S S D +A + Q +L+ S +
Sbjct: 61 LEEGGVQRFCDSKMLGGIP-EPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMS-NILY 118
Query: 173 ELNVKVKT----ALVDMYAK----CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST 224
++N K D+Y+K + R +FE + ++ +VSWN +I+G A +G
Sbjct: 119 QVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHE 178
Query: 225 KALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
AL + +M + +++PD T VL + +G+ +R+ + D V + +
Sbjct: 179 DALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGY-DADVFIGSSL 237
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+D+ R+D++C + M + D W +++ C +G
Sbjct: 238 IDMYAKCTRVDDSCR-VFYMLPQHDGISWNSIIAGCVQNG 276
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/539 (38%), Positives = 325/539 (60%), Gaps = 35/539 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL ++++Y+ C L A LFD++P +++ W VLI Y+ +G A+ L+ ++L +
Sbjct: 141 VLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHL 200
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G P+ FT LKA + GR++H ++ ++ +V VG++L+DMYA+ + + A
Sbjct: 201 GFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREA 260
Query: 128 RQVFDKILER---------------------------------DPSEATLVTVISASADI 154
+ +F+ + + +P+ T +V +A A
Sbjct: 261 KVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASS 320
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
+L QG+ +H + + + L+DMYAK G +K A+ +F +L ++ +VSWN++I
Sbjct: 321 GSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSII 380
Query: 215 TGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+GYA HG +AL LFE+M K +VQP+ ITF+ VL+ACS GL DEG+ +FE +++ + I
Sbjct: 381 SGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFE-LMKKHKI 439
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
+ V H+ +VDLLG +GRL+EA I +M +KP VWGALL SC++H ++ L A E
Sbjct: 440 EAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAE 499
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
++ EL+PHD+G +V+LSNIYA A AK+RK+M + G+KK ACSW+E++N+ H F+
Sbjct: 500 QIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFV 559
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
+ D SHP +EI + + G++KE GYVP T V + ++ + HSE+LA+AF
Sbjct: 560 ANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFA 619
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++ TP G + I KN++IC DCH A KF S++ REI VRD NR+HHF G+CSC DYW
Sbjct: 620 VLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 92/193 (47%), Gaps = 8/193 (4%)
Query: 138 DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
+P +++ + L QGR +H FE ++ + +++MYAKCG ++ A++
Sbjct: 102 EPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQD 161
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGL 256
LF+++ K +VSW +I+GY+ G +++AL LF KM QP+ T +L A G
Sbjct: 162 LFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPS 221
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
GR ++ Y D +V + ++D+ + EA +I + W AL+
Sbjct: 222 DHHGRQLHAFSLK-YGYDMNVHVGSSLLDMYARWAHMREA-KVIFNSLAAKNVVSWNALI 279
Query: 317 NSCKLHGHVKLAE 329
GH + E
Sbjct: 280 A-----GHARKGE 287
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/540 (38%), Positives = 322/540 (59%), Gaps = 35/540 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL T L+ +Y+ C L A ++F+ + ++N W+ +I Y + A+ LY +L I
Sbjct: 246 VLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCI 305
Query: 68 -GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
GL P T L+AC+ L+ ++ G+++H +I++ + D VG +LI MYAKC + N
Sbjct: 306 YGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDN 365
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISASAD 153
A D+++ +D P T++ ++ A +
Sbjct: 366 AVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSH 425
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+AAL G HG++ F + + A++DMY+KCG + ++R +F++++ + ++SWN M
Sbjct: 426 LAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTM 485
Query: 214 ITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I GY +HG +AL LF++++ ++PD +T + VLSACS GL EG+ +F SM ++++
Sbjct: 486 IIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFN 545
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I P + HY CMVDLL +G LDEA I +M P+ +WGALL +C+ H ++++ E
Sbjct: 546 IKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVS 605
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
+K+ L P GN+V++SNIY+ W+ A +R + G KKS CSW+E+ H F
Sbjct: 606 KKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVF 665
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
+ G SHP I KL+ L +MK+ GY + V HDVE +EK ++ HSE++AIAF
Sbjct: 666 IGGHQSHPQSASINKKLQELLVQMKKLGYRADSSFVLHDVEEEEKEQILLYHSEKVAIAF 725
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
G++NT +R+L+TKNL+IC DCH AIKFI+ +TEREITVRD +R+HHFKDGIC+C D+W
Sbjct: 726 GILNTSPSSRILVTKNLRICVDCHSAIKFITLLTEREITVRDASRFHHFKDGICNCQDFW 785
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 190/364 (52%), Gaps = 41/364 (11%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
AT+L + + + + A +FD+IP+ ++ LWN++IR YAW+GP++ +I LY +L++G+
Sbjct: 44 ATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGV 103
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
P NFTFPF LKACS+L A++ GR IH D++V AL+ MYAKC + A+
Sbjct: 104 TPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQT 163
Query: 130 VFDKILERD-----------------------------------PSEATLVTVISASADI 154
+F+ I +D P+ +TLV+++
Sbjct: 164 LFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQA 223
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
AL QG+ +H + R+ F NV ++TAL+DMYAKC L+ AR +F + +K V W+AMI
Sbjct: 224 NALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMI 283
Query: 215 TGYAMHGHSTKALDLFEKMK--DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD-Y 271
GY +H + AL L++ M + P T +L AC++ G+ M++
Sbjct: 284 GGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGM 343
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
+D +V + ++ + G +D A + +M K D + A+++ C +G+ + A L
Sbjct: 344 DLDTTVGN--SLISMYAKCGIMDNAVGFLDEMIAK-DTVSYSAIISGCVQNGYAEKALLI 400
Query: 332 LEKL 335
++
Sbjct: 401 FRQM 404
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 189/390 (48%), Gaps = 43/390 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQ--RNLFLWNVLIRAYAWNGPYEVAI 58
+G ++T L+H+Y+ C L+ A LF+ I R++ WN +I A++++ + I
Sbjct: 136 LGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTI 195
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
++ + G+ P++ T L +A+ +G+ IH IRN + +V + AL+DMY
Sbjct: 196 HSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMY 255
Query: 119 AKCSCVVNARQVFDKILER----------------------------------DPSEATL 144
AKC + AR++F+ + ++ +P+ ATL
Sbjct: 256 AKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATL 315
Query: 145 VTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE 204
T++ A A + L +G++LH + +L+ V +L+ MYAKCG++ A +++
Sbjct: 316 ATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIA 375
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMF 263
K VS++A+I+G +G++ KAL +F +M+ + P T + +L ACS G
Sbjct: 376 KDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCC 435
Query: 264 F-ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
++VR + D S+ ++D+ G++ + ++ +M+ + D W ++ +H
Sbjct: 436 HGYTVVRGFTNDTSI--CNAIIDMYSKCGKITISREIFDRMQNR-DIISWNTMIIGYGIH 492
Query: 323 GHVKLAELALEKL--IELEPHDAGNYVILS 350
G A ++L + L+P D +LS
Sbjct: 493 GLCVEALSLFQELQALGLKPDDVTLIAVLS 522
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + ++ +YS C + + ++FDR+ R++ WN +I Y +G A+ L+
Sbjct: 443 GFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLF 502
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
L +GL PD+ T L ACS + EG+
Sbjct: 503 QELQALGLKPDDVTLIAVLSACSHSGLVTEGK 534
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 8/169 (4%)
Query: 161 RELHGFSWR---HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
R++ FS HR + T L + +++AR++F+Q+ + VV WN MI Y
Sbjct: 23 RQIRSFSPHPHPHRVSDSDAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTY 82
Query: 218 AMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFF-ESMVRDYHIDP 275
A G +++ L+ M + V P + TF +L ACS GR+ + + +D
Sbjct: 83 AWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDL 142
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP-DPGVWGALLNSCKLHG 323
V T ++ + G L +A L + + D W A++ + H
Sbjct: 143 YVS--TALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHA 189
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/518 (38%), Positives = 322/518 (62%), Gaps = 14/518 (2%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ +YS C L A ++F+++ +RN+ W +I Y +G + AI L ++ + G
Sbjct: 288 FSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEG 347
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D L AC+ +++ G+ +H+ + N E+++FV AL+DMY KC + A
Sbjct: 348 VKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGAN 407
Query: 129 QVFDKILERD------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
VF ++ +D P T+ ++ A A ++AL +G+E+HG+ R+ + +
Sbjct: 408 SVFSTMVVKDIISWNTMIGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDR 467
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE 236
V ALVD+Y KCG++ +AR LF+ + K +VSW MI+GY MHG+ +A+ F +M+D
Sbjct: 468 HVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDA 527
Query: 237 -VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
++PD ++F+ +L ACS GL ++G FF M D++I+P ++HY CMVDLL +G L +
Sbjct: 528 GIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSK 587
Query: 296 ACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYAR 355
A + I + + PD +WGALL C+++ ++LAE E++ ELEP + G YV+L+NIYA
Sbjct: 588 AYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAE 647
Query: 356 AANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG-DASHPNCDEIYAKLKWLEG 414
A WE V ++R+ + +G++K+ CSWIE+K K + F+SG ++SHP+ +I + LK +
Sbjct: 648 AEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRR 707
Query: 415 RMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDD 474
+MKE GY P T+ + + +K +C HSE+LA+AFGL+ P + +TKNL++C D
Sbjct: 708 KMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGD 767
Query: 475 CHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
CH KF+SK T REI +RD NR+HHFK+G CSC +W
Sbjct: 768 CHEMAKFMSKETRREIVLRDSNRFHHFKNGYCSCRGFW 805
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 191/432 (44%), Gaps = 51/432 (11%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL KLV LY+ C L ++FD + ++N++LWN ++ YA G ++ +I L+ ++E
Sbjct: 135 VLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEK 194
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHE--DVIRNKWETDVFVGAALIDMYAKCSCVV 125
G+ EG+R ++ + DV ++I Y
Sbjct: 195 GI---------------------EGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTE 233
Query: 126 NARQVFDKI--LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALV 183
+++ ++ L D AT+++V+ A+ L G+ +H + + FE + L+
Sbjct: 234 RGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLL 293
Query: 184 DMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHI 242
DMY+KCG + A +FE++ E+ VVSW +MI GY G S A+ L ++M+ E V+ D +
Sbjct: 294 DMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVV 353
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
+L AC+R G D G+ + ++ +++ ++ ++D+ G +D A +
Sbjct: 354 ATTSILHACARSGSLDNGKDVHD-YIKANNMESNLFVCNALMDMYTKCGSMDGANSVFST 412
Query: 303 MRVKPDPGVWGALLNSCKLHGHVKLAEL-ALEKLIELEPHDAGNYVILSNIYAR---AAN 358
M VK D W ++ K L A L LE + IL N Y+ AN
Sbjct: 413 MVVK-DIISWNTMIGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVAN 471
Query: 359 WE-------GVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKW 411
GV L +L+ D K + SW +SG H +E A
Sbjct: 472 ALVDLYVKCGVLGLARLLFDMIPSKDLV-SWT-------VMISGYGMHGYGNEAIATFN- 522
Query: 412 LEGRMKEAGYVP 423
M++AG P
Sbjct: 523 ---EMRDAGIEP 531
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 122/273 (44%), Gaps = 21/273 (7%)
Query: 32 RIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEE 91
R R + +N I + G E A+EL + L + T+ L+ C+ ++ +
Sbjct: 60 RTIDRQVTDYNAKILHFCQLGNLENAMELVCMCQKSEL--ETKTYSSVLQLCAGSKSLTD 117
Query: 92 GRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISAS 151
G+++H + N D +G L+ +YA C + R+VFD + +++ ++S
Sbjct: 118 GKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNF--MVSEY 175
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
A I F+ ++ + +V+ + + A LF++L ++ V+SWN
Sbjct: 176 AKIG---------------DFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWN 220
Query: 212 AMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
+MI+GY +G + + L+++++M + D T + VL C+ G G+ S+
Sbjct: 221 SMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKA-VHSLAIK 279
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
+ + ++D+ G LD A + +M
Sbjct: 280 STFERRINFSNTLLDMYSKCGDLDGALRVFEKM 312
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 34/262 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ +A LV LY C L A LFD IP ++L W V+I Y +G AI +
Sbjct: 462 GYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATF 521
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMYA 119
+ + G+ PD +F L ACS +E+G R +++N + + + A ++D+ +
Sbjct: 522 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY-IMKNDFNIEPKLEHYACMVDLLS 580
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHR-----FEL 174
+ + A + + TL A+ A L R H + FEL
Sbjct: 581 RTGNLSKAYEFIE----------TLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFEL 630
Query: 175 ---NVKVKTALVDMYAKCGLVKVARNLFEQ-----LREKRVVSW-------NAMITG-YA 218
N L ++YA+ + + + E+ LR+ SW N ++G +
Sbjct: 631 EPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNS 690
Query: 219 MHGHSTKALDLFEKMKDEVQPD 240
H HS K L +KM+ +++ +
Sbjct: 691 SHPHSKKIESLLKKMRRKMKEE 712
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/577 (36%), Positives = 330/577 (57%), Gaps = 65/577 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + T L+ YS C + A ++FD I +++ W ++ +A N ++ A++L
Sbjct: 168 LGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKL 227
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ +G P+NFTF KAC L A + G+ +H +++++E D++VG AL+D+Y K
Sbjct: 228 FSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTK 287
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ +AR+ F++I ++D P++ T +V
Sbjct: 288 SGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASV 347
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A A + L G ++H + +V V AL+D+YAKCG ++ + LF + +
Sbjct: 348 LQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRND 407
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKD-------------------------------- 235
V+WN +I G+ G KAL LF M +
Sbjct: 408 VTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSL 467
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
V+PD +TFVGVLSAC+ GL D+G+ +F SM++D+ I+P ++HYTCMV LLG G LD+
Sbjct: 468 TVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDK 527
Query: 296 ACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYAR 355
A LI ++ +P VW ALL +C +H ++L ++ ++++E+EP D +V+LSN+YA
Sbjct: 528 AVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYAT 587
Query: 356 AANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGR 415
A W+ VA +RK M +G+KK SWIE + H+F GD SHP I L+WL +
Sbjct: 588 AKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMK 647
Query: 416 MKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDC 475
K+AGY+P V DVE++EK ++ HSERLA++FG+I TP G+ + I KNL+IC DC
Sbjct: 648 TKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDC 707
Query: 476 HIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
H AIK ISK+ +REI VRD+NR+HHF++G+CSCGDYW
Sbjct: 708 HAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 744
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 169/352 (48%), Gaps = 43/352 (12%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+++Y D L +A +LFD +P+RN + LI+ YA + + AIEL+ RL G +
Sbjct: 79 LLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELN 138
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
F F LK + E G IH + + E++ FVG ALID Y+ C V AR+VFD
Sbjct: 139 PFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFD 198
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
IL +D P+ T +V A + A
Sbjct: 199 GILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDV 258
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G+ +HG + + R+EL++ V AL+D+Y K G + AR FE++ +K V+ W+ MI YA
Sbjct: 259 GKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQ 318
Query: 220 HGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSV 277
S +A+++F +M+ V P+ TF VL AC+ + G +++ H D V
Sbjct: 319 SDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFV 378
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+ ++D+ GR++ + +L + + D W ++ GHV+L +
Sbjct: 379 SN--ALMDVYAKCGRMENSMELFAESPHRNDV-TWNTVIV-----GHVQLGD 422
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 161/376 (42%), Gaps = 59/376 (15%)
Query: 79 ALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD 138
AL+ C G+ +H ++++ D+F L++MY K + +A ++FD++ ER+
Sbjct: 44 ALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERN 103
Query: 139 PSEATLVTVISASADIAAL-----------PQGRELHGFSWRHRFEL------------- 174
+ VT+I A+ +G EL+ F + +L
Sbjct: 104 T--ISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGI 161
Query: 175 -----------NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
N V TAL+D Y+ CG V VAR +F+ + K +VSW M+T +A +
Sbjct: 162 HACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCF 221
Query: 224 TKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD-YHIDPSVQHYT 281
+AL LF +M+ +P++ TF V AC FD G+ ++ Y +D V
Sbjct: 222 KEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVG--V 279
Query: 282 CMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPH 341
++DL SG +D+A ++ K D W ++ + ++ A+E ++
Sbjct: 280 ALLDLYTKSGDIDDARRAFEEIP-KKDVIPWSFMIAR---YAQSDQSKEAVEMFFQMR-- 333
Query: 342 DAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPN 401
++L N + A+ + A + L + I C I++ + F+S
Sbjct: 334 ---QALVLPNQFTFASVLQACATMEGL----NLGNQIHCHVIKIGLHSDVFVSNALM--- 383
Query: 402 CDEIYAKLKWLEGRMK 417
++YAK +E M+
Sbjct: 384 --DVYAKCGRMENSME 397
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/510 (43%), Positives = 308/510 (60%), Gaps = 65/510 (12%)
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN- 126
G+ P+ FT +KAC++++++E+G++ H +I+ +E+DV V AL+ MYA+C + +
Sbjct: 5 GVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDA 64
Query: 127 ------------------------------ARQVFDKILERDPSEATLV----------- 145
A ++F ++ ERD T V
Sbjct: 65 GHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGD 124
Query: 146 ----------------------TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALV 183
+V+SA AD+AAL GR+ H + + F L++ V +ALV
Sbjct: 125 ESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALV 184
Query: 184 DMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHI 242
DMYAK G ++ A +F+++ ++ VSWN++ITG A HG A+ LFE+M + ++P+ I
Sbjct: 185 DMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEI 244
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
+FVGVLSACS GL +EGR +F M ++Y I P V HYTCM+DLLG +G LDEA + I
Sbjct: 245 SFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFING 304
Query: 303 MRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGV 362
M V+PD VWGALL +C++HG+ +LA+ E L+ +E AG YV+LSNIYA A W+
Sbjct: 305 MPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDA 364
Query: 363 AKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYV 422
AK+RKLM DRG+ K SWIEVK HAF++G+ SHP EI+ L+ L +MK AGYV
Sbjct: 365 AKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAAGYV 424
Query: 423 PGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFI 482
P V DVE+DEK + HSE+LAIAFG+INT GT + + KNL++C DCH IKFI
Sbjct: 425 PNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTVIKFI 484
Query: 483 SKITEREITVRDVNRYHHFKDGICSCGDYW 512
S R+I VRD NR+HHFKDG CSCGDYW
Sbjct: 485 SLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 131/299 (43%), Gaps = 66/299 (22%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MGF V+ T LVH+Y+ C L +A +FD++ +R+ WN +I +A N + A++L
Sbjct: 39 MGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKL 98
Query: 61 YYRLLE-------------------------------IGLVPDNFTFPFALKACSALSAI 89
+Y + E G+ D F L AC+ L+A+
Sbjct: 99 FYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAAL 158
Query: 90 EEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----------- 138
E GR+ H V+++ + D+ VG+AL+DMYAK + +A QVFDK+ +R+
Sbjct: 159 ELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGC 218
Query: 139 ----------------------PSEATLVTVISASADIAALPQGRELHGF-SWRHRFELN 175
P+E + V V+SA + + +GR + + +
Sbjct: 219 AQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPD 278
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLR-EKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
V T ++D+ + G + A N + E V W A++ +HG++ A + E +
Sbjct: 279 VSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHL 337
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/518 (39%), Positives = 322/518 (62%), Gaps = 14/518 (2%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ +YS C L A ++F+++ +RN+ W +I Y +G + AI+L ++ + G
Sbjct: 288 FSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEG 347
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D L AC+ +++ G+ +H+ + N E+++FV AL+DMYAKC + A
Sbjct: 348 VKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAAN 407
Query: 129 QVFDKILERD------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
VF ++ +D P T+ V+ A A ++AL +G+E+HG+ R+ + +
Sbjct: 408 SVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDR 467
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE 236
V ALVD+Y KCG++ +AR LF+ + K +VSW MI GY MHG+ +A+ F +M+D
Sbjct: 468 HVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDA 527
Query: 237 -VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
++PD ++F+ +L ACS GL ++G FF M D++I+P ++HY CMVDLL +G L +
Sbjct: 528 GIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSK 587
Query: 296 ACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYAR 355
A + I + + PD +WGALL C+ + ++LAE E++ ELEP ++G YV+L+NIYA
Sbjct: 588 AYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAE 647
Query: 356 AANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG-DASHPNCDEIYAKLKWLEG 414
A WE V +LR+ + +G++K+ CSWIE+K K + F+SG ++SHP+ I + LK +
Sbjct: 648 AEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRR 707
Query: 415 RMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDD 474
+MKE G+ P T+ + + +K +C HSE+LA+AFGL+ P + +TKNL++C D
Sbjct: 708 KMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGD 767
Query: 475 CHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
CH KF+SK T REI +RD NR+HHFKDG CSC +W
Sbjct: 768 CHEMAKFMSKETRREIVLRDPNRFHHFKDGYCSCRGFW 805
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 152/322 (47%), Gaps = 28/322 (8%)
Query: 4 GFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
G L KLV Y+ C L ++FD + ++N++LWN ++ YA G ++ +I L+
Sbjct: 131 GVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKI 190
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHE--DVIRNKWETDVFVGAALIDMYAKC 121
++E G+ EG+R ++ + DV ++I Y
Sbjct: 191 MVEKGI---------------------EGKRPESAFELFDKLCDRDVISWNSMISGYVSN 229
Query: 122 SCVVNARQVFDKI--LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
++ ++ L D AT+++V+ A+ L G+ +H + + FE +
Sbjct: 230 GLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFS 289
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQ 238
L+DMY+KCG + A +FE++ E+ VVSW +MI GY G S A+ L ++M+ E V+
Sbjct: 290 NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVK 349
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
D + +L AC+R G D G+ + ++ +++ ++ ++D+ G ++ A
Sbjct: 350 LDVVAITSILHACARSGSLDNGKDVHD-YIKANNMESNLFVCNALMDMYAKCGSMEAANS 408
Query: 299 LIMQMRVKPDPGVWGALLNSCK 320
+ M VK D W ++ K
Sbjct: 409 VFSTMVVK-DIISWNTMIGELK 429
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 30/300 (10%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
F P+ ++ + SA HQ+ D +N I + G E A+EL
Sbjct: 42 FSPIFSSCIPIRISATPTRTIDHQVTD---------YNAKILHFCQLGDLENAMELICMC 92
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
+ L + T+ L+ C+ L + +G+++H + N D +G L+ YA C +
Sbjct: 93 KKSEL--ETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDL 150
Query: 125 VNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVD 184
R+VFD + +++ ++S A I F+ ++ + +V+
Sbjct: 151 KEGRRVFDTMEKKNVYLWNF--MVSEYAKIG---------------DFKESICLFKIMVE 193
Query: 185 MYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHIT 243
+ + A LF++L ++ V+SWN+MI+GY +G + + L ++++M + D T
Sbjct: 194 KGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLAT 253
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
+ VL C+ G G+ S+ + + ++D+ G LD A + +M
Sbjct: 254 IISVLVGCANSGTLSLGKA-VHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKM 312
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 110/262 (41%), Gaps = 34/262 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ +A LV LY C L A LFD IP ++L W V+I Y +G AI +
Sbjct: 462 GYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATF 521
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYA 119
+ + G+ PD +F L ACS +E+G R +++N + E + A ++D+ +
Sbjct: 522 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY-IMKNDFNIEPKLEHYACMVDLLS 580
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHR-----FEL 174
+ + A + + TL A+ A L R H + FEL
Sbjct: 581 RTGNLSKAYEFIE----------TLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFEL 630
Query: 175 ---NVKVKTALVDMYAKCGLVKVARNLFEQ-----LREKRVVSW-------NAMITG-YA 218
N L ++YA+ + + L E+ LR+ SW N ++G +
Sbjct: 631 EPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNS 690
Query: 219 MHGHSTKALDLFEKMKDEVQPD 240
H HS L +KM+ +++ +
Sbjct: 691 SHPHSKNIESLLKKMRRKMKEE 712
>gi|115441047|ref|NP_001044803.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|15408890|dbj|BAB64281.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113534334|dbj|BAF06717.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|125572632|gb|EAZ14147.1| hypothetical protein OsJ_04076 [Oryza sativa Japonica Group]
Length = 660
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 239/555 (43%), Positives = 330/555 (59%), Gaps = 49/555 (8%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F P L+T+L+ Y++ L A Q+FD P +++F+WN L++A A E A+
Sbjct: 110 FRSDPFLSTRLIDAYASLGELPAARQVFDEAPVKSIFVWNALLKALALADHGEEALA--- 166
Query: 63 RLLEIG--LVP-DNFTFPFALKACSALS-----AIEEGRRIHEDVIRNKWETDVFVGAAL 114
RL ++G VP D++++ LKAC A S A R IH +R + V L
Sbjct: 167 RLADMGRLRVPVDSYSYAHGLKACIAASTSHVPASALVREIHAHAVRRGYGLHTHVATTL 226
Query: 115 IDMYAKCSCVVNARQVFDKILERD-----------------------------------P 139
ID YAK V A VF + ER+ P
Sbjct: 227 IDCYAKLGIVSYAESVFATMPERNVVSWTAMIGCYAKNERPGDAILLFQEMVASDEDLVP 286
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF 199
+ T+V ++ A A + AL QG+ LH + R F+ V V AL+ MY KCG ++ R++F
Sbjct: 287 NSVTIVCILHAFAGVNALGQGKLLHAYILRRGFDSLVSVLNALMAMYMKCGCLEAGRHIF 346
Query: 200 EQL-REKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLF 257
+ + K VVSWN +I+GY MHG +A+ +FE M V P+ ITF+ VL ACS GL
Sbjct: 347 DLIGHRKDVVSWNTLISGYGMHGFGHEAVQVFEDMTQMGVSPNIITFISVLGACSHAGLV 406
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
DEG+ FESMV DY++ P +HY CMVDLLG +G LDEA +LI M ++P P VWG+LL
Sbjct: 407 DEGKRLFESMV-DYNVTPRAEHYACMVDLLGRAGHLDEAVELIQGMHIRPSPQVWGSLLG 465
Query: 318 SCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKS 377
+C++H HV+ AE+A +L +LEP +AGNYV+L++IYARA V L+ L+ + ++K
Sbjct: 466 ACRIHRHVEYAEMACSQLFDLEPRNAGNYVLLADIYARAKLHSEVGVLKDLLEEHALEKV 525
Query: 378 IACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEK 437
CSWIEVK + H F+S D +P +E+ A + +MK GYVP T +V +D+E +EK
Sbjct: 526 PGCSWIEVKKRLHMFVSVDNKNPQIEELQALIGEFVTQMKNDGYVPDTGAVLYDIEEEEK 585
Query: 438 ANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNR 497
++ HSE+LA+AFGLINT G + ITKNL++C+DCH KFISK EREI VRDVNR
Sbjct: 586 EKILLGHSEKLAVAFGLINTGRGEVIRITKNLRLCEDCHSVTKFISKYAEREIIVRDVNR 645
Query: 498 YHHFKDGICSCGDYW 512
+HHF+DGICSCGDYW
Sbjct: 646 FHHFRDGICSCGDYW 660
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/515 (40%), Positives = 320/515 (62%), Gaps = 6/515 (1%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + L+ LY C CL A + D + +++ WN ++ YA N ++ A+++
Sbjct: 162 VGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDI 221
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + PD T L A + S+ E E++ N + + +I +Y K
Sbjct: 222 CREMDGVRQKPDACTMASLLPAVTNTSS--ENVLYVEEMFMNLEKKSLVSWNVMISVYMK 279
Query: 121 CSCVVNARQVFDKI--LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
S + ++ ++ E +P T +V+ A D++AL GR +H + R + N+ +
Sbjct: 280 NSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLL 339
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ 238
+ +L+DMYA+CG ++ A+ +F++++ + V SW ++I+ Y M G A+ LF +M++ Q
Sbjct: 340 ENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQ 399
Query: 239 -PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
PD I FV +LSACS GL +EG+ +F+ M DY I P ++H+ C+VDLLG SGR+DEA
Sbjct: 400 SPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAY 459
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAA 357
++I QM +KP+ VWGALL+SC+++ ++ + LA +KL++L P ++G YV+LSNIYA+A
Sbjct: 460 NIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAG 519
Query: 358 NWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK 417
W V +R LM R I+K S +E+ N+ H FL+GD HP EIY +L L G+MK
Sbjct: 520 RWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMK 579
Query: 418 EAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHI 477
E GYVP T+S HDVE ++K + HSE+LAI F ++NT + + + ITKNL++C DCHI
Sbjct: 580 ELGYVPKTDSALHDVEEEDKECHLAVHSEKLAIVFAILNTQE-SPIRITKNLRVCGDCHI 638
Query: 478 AIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
A K ISKI +REI +RD NR+HHFKDGICSCGDYW
Sbjct: 639 AAKLISKIVQREIVIRDTNRFHHFKDGICSCGDYW 673
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 167/335 (49%), Gaps = 23/335 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+ F +P L KL+ Y+A A +FD IP+RN+ +NV+IR+Y N Y+ A+ +
Sbjct: 61 LSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLV 120
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ G PD++T+P LKACS + G ++H V + + ++FVG LI +Y K
Sbjct: 121 FRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGK 180
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQG----------RELHGFSWRH 170
C C+ AR V D++ +D V+S ++ +A Q RE+ G +
Sbjct: 181 CGCLPEARCVLDEMQSKD--------VVSWNSMVAGYAQNMQFDDALDICREMDGVRQKP 232
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
+ A+ + ++ V +F L +K +VSWN MI+ Y + K++DL+
Sbjct: 233 DACTMASLLPAVTNTSSEN--VLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLY 290
Query: 231 EKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGH 289
+M K EV+PD IT VL AC GR E + R + P++ ++D+
Sbjct: 291 LQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERK-KLCPNMLLENSLIDMYAR 349
Query: 290 SGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
G L++A + +M+ + D W +L+++ + G
Sbjct: 350 CGCLEDAKRVFDRMKFR-DVASWTSLISAYGMTGQ 383
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
L V+ DI L + +H + F N + L+ YA G +ARN+F+ +
Sbjct: 38 LGKVLDQYPDIKTL---KNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIP 94
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACS-----RGGLF 257
E+ V+ +N MI Y + AL +F M PDH T+ VL ACS R GL
Sbjct: 95 ERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQ 154
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
G +F +D ++ ++ L G G L EA ++ +M+ K D W +++
Sbjct: 155 LHGAVF------KVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSK-DVVSWNSMV 206
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/545 (40%), Positives = 327/545 (60%), Gaps = 41/545 (7%)
Query: 4 GFHPV--LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P+ L L+++Y + L++AHQLFD++PQRN+ W +I AY+ ++ A+EL
Sbjct: 91 GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELL 150
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+L + P+ +T+ L++C+ +S + R +H +I+ E+DVFV +ALID++AK
Sbjct: 151 VLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKL 207
Query: 122 SCVVNARQVFDKILERDP---------------------------------SEATLVTVI 148
+A VFD+++ D +ATL +V+
Sbjct: 208 GEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVL 267
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A +A L G + H + ++ ++ + ALVDMY KCG ++ A +F Q++E+ V+
Sbjct: 268 RACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVI 325
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W+ MI+G A +G+S +AL LFE+MK +P++IT VGVL ACS GL ++G +F SM
Sbjct: 326 TWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSM 385
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ Y IDP +HY CM+DLLG +G+LD+A L+ +M +PD W LL +C++ ++ L
Sbjct: 386 KKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVL 445
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE A +K+I L+P DAG Y +LSNIYA + W+ V ++R M DRGIKK CSWIEV
Sbjct: 446 AEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNK 505
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ HAF+ GD SHP E+ KL L R+ GYVP T V D+E ++ + + HSE+
Sbjct: 506 QIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEK 565
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+AFGL+ P + I KNL+IC DCH+ K SK+ R I +RD RYHHF+DG CS
Sbjct: 566 LALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCS 625
Query: 508 CGDYW 512
CGDYW
Sbjct: 626 CGDYW 630
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 132/299 (44%), Gaps = 35/299 (11%)
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
GL D+ T+ +K C + A+ EG I + N +F+ LI+MY K + + +A
Sbjct: 56 GLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDA 115
Query: 128 RQVFDK------------------------------ILERDPSEATLVTVISASADIAAL 157
Q+FD+ ++ RD + T S +
Sbjct: 116 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGM 175
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
R LH + E +V V++AL+D++AK G + A ++F+++ + WN++I G+
Sbjct: 176 SDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGF 235
Query: 218 AMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
A + S AL+LF++MK + T VL AC+ L + G ++ V D
Sbjct: 236 AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG---MQAHVHIVKYDQD 292
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+ +VD+ G L++A + QM+ + D W +++ +G+ + A E++
Sbjct: 293 LILNNALVDMYCKCGSLEDALRVFNQMKER-DVITWSTMISGLAQNGYSQEALKLFERM 350
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/538 (40%), Positives = 331/538 (61%), Gaps = 36/538 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y++ + +A +LFD IP +++ WN +I YA G Y+ A+EL+ ++++ +
Sbjct: 134 TALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVR 193
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD T+ L AC+ +IE GR++H V + +++++ + ALID+Y+KC V A +
Sbjct: 194 PDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGL 253
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F + +D P++ T+++V+ A A + A+
Sbjct: 254 FQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAI 313
Query: 158 PQGRELHGF-SWRHRFELNVK-VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
GR +H + R + N ++T+L+DMYAKCG ++ A +F + K + SWNAMI
Sbjct: 314 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIF 373
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+AMHG + + DLF +M K ++PD ITFVG+LSACS G+ D GR F SM +DY +
Sbjct: 374 GFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMT 433
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY CM+DLLGHSG EA ++I M ++PD +W +LL +CK+HG+V+LAE +
Sbjct: 434 PKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQN 493
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
LI++EP + +Y++LSNIYA A WE VA++R L+ + +KK CS IEV + F+
Sbjct: 494 LIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVV 553
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD HP EIY L+ +E ++EAG+VP T V ++E + K + HSE+LAIAFGL
Sbjct: 554 GDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGL 613
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I+T GT+L I KNL++C +CH A K +SKI +REI RD R+HHF+DG+CSC DYW
Sbjct: 614 ISTKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFHHFRDGVCSCNDYW 671
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 161/313 (51%), Gaps = 43/313 (13%)
Query: 21 DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
D L A +F+ I + N +WN +IR +A + ++ LY ++ +GL+P+++TFPF L
Sbjct: 12 DGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLL 71
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPS 140
K+C+ EG++IH V++ ++ D++V +LI MY + + +A +VFD+ RD
Sbjct: 72 KSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRD-- 129
Query: 141 EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
V TAL+ YA G ++ A+ LF+
Sbjct: 130 -----------------------------------VVSYTALITGYASRGDIRSAQKLFD 154
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEK-MKDEVQPDHITFVGVLSACSRGGLFDE 259
++ K VVSWNAMI+GYA G +AL+LFE+ MK V+PD T+V VLSAC+ G +
Sbjct: 155 EIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIEL 214
Query: 260 GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC 319
GR S V D+ D +++ ++DL G ++ AC L + K D W L+
Sbjct: 215 GRQ-VHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYK-DVISWNTLIGG- 271
Query: 320 KLHGHVKLAELAL 332
+ H+ L + AL
Sbjct: 272 --YTHMNLYKEAL 282
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 142/312 (45%), Gaps = 35/312 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + L+ LYS C + A LF + +++ WN LI Y Y+ A+ L+
Sbjct: 226 GFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLF 285
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDV-IRNKWETDV-FVGAALIDMYA 119
+L G P++ T L AC+ L AI+ GR IH + R K T+ + +LIDMYA
Sbjct: 286 QEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYA 345
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
KC + A QVF+ +L + S A+ G +HG + F+L +++
Sbjct: 346 KCGDIEAAHQVFNSMLHKSLSSWN------------AMIFGFAMHGRA-DASFDLFSRMR 392
Query: 180 --------TALVDMYAKC---GLVKVARNLFEQLRE-----KRVVSWNAMITGYAMHGHS 223
V + + C G++ + R++F + + ++ + MI G
Sbjct: 393 KIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLF 452
Query: 224 TKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
+A ++ M E++PD + + +L AC G + F +++++ +PS Y +
Sbjct: 453 KEAEEMINTM--EMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPS--SYILL 508
Query: 284 VDLLGHSGRLDE 295
++ +GR ++
Sbjct: 509 SNIYASAGRWED 520
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 83/182 (45%), Gaps = 6/182 (3%)
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSR 253
A ++FE ++E + WN MI G+A+ +L L+ M + P+ TF +L +C++
Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76
Query: 254 GGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWG 313
F EG+ +++ D + +T ++ + + RL++A + D +
Sbjct: 77 SKTFTEGQQIHGQVLK-LGFDLDLYVHTSLISMYVQNWRLEDAYK-VFDRSSHRDVVSYT 134
Query: 314 ALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRG 373
AL+ G ++ A+ + E+ D ++ + + YA ++ +L + M+
Sbjct: 135 ALITGYASRGDIRSAQKLFD---EIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMN 191
Query: 374 IK 375
++
Sbjct: 192 VR 193
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/535 (40%), Positives = 313/535 (58%), Gaps = 35/535 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ +YS C L +A +F + R++ + +I YA G A++L+ + E G+ PD
Sbjct: 186 LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 245
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+T L C+ ++EG+R+HE + N D+FV AL+DMYAKC + A VF
Sbjct: 246 VYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFS 305
Query: 133 KILERD----------------------------------PSEATLVTVISASADIAALP 158
++ +D P E T+ V+ A A ++A
Sbjct: 306 EMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFD 365
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
+GRE+HG+ R+ + + V +LVDMYAKCG + +A LF+ + K +VSW MI GY
Sbjct: 366 KGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYG 425
Query: 219 MHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
MHG +A+ LF +M+ ++ D I+FV +L ACS GL DEG FF M + I+P+V
Sbjct: 426 MHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTV 485
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+HY C+VD+L +G L +A I M + PD +WGALL C++H VKLAE EK+ E
Sbjct: 486 EHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE 545
Query: 338 LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDA 397
LEP + G YV+++NIYA A WE V +LRK + RG++K+ CSWIE+K + + F++GD+
Sbjct: 546 LEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDS 605
Query: 398 SHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINT 457
S+P + I A L+ + RM E GY P T+ D E EK +C HSE+LA+A G+I++
Sbjct: 606 SNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISS 665
Query: 458 PDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
G + +TKNL++C DCH KF+SK+T REI +RD NR+H FKDG CSC +W
Sbjct: 666 GHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 720
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 167/343 (48%), Gaps = 40/343 (11%)
Query: 30 FDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAI 89
FD + WN+L+ A +G + +I L+ +++ G+ D++TF K+ S+L ++
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 90 EEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSE-------- 141
G ++H ++++ + VG +L+ Y K V +AR+VFD++ ERD
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 142 -------------------------ATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
AT+V+V + AD + GR +H + F
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE 236
+ L+DMY+KCG + A+ +F ++ ++ VVS+ +MI GYA G + +A+ LFE+M++E
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240
Query: 237 -VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
+ PD T VL+ C+R L DEG+ E +++ + + ++D+ G + E
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHE-WIKENDLGFDIFVSNALMDMYAKCGSMQE 299
Query: 296 ACDLIMQMRVKPDPGVW----GALLNSCKLHGHVKLAELALEK 334
A + +MRVK D W G +C + + L L LE+
Sbjct: 300 AELVFSEMRVK-DIISWNTIIGGYSKNCYANEALSLFNLLLEE 341
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 175/389 (44%), Gaps = 40/389 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + LV Y + +A ++FD + +R++ WN +I Y NG E + ++
Sbjct: 74 GFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVF 133
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++L G+ D T C+ I GR +H ++ + + L+DMY+KC
Sbjct: 134 VQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKC 193
Query: 122 SCVVNARQVFDKILER---------------------------------DPSEATLVTVI 148
+ +A+ VF ++ +R P T+ V+
Sbjct: 194 GDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 253
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+ A L +G+ +H + + ++ V AL+DMYAKCG ++ A +F ++R K ++
Sbjct: 254 NCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDII 313
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
SWN +I GY+ + ++ +AL LF + +E PD T VL AC+ FD+GR
Sbjct: 314 SWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGY 373
Query: 267 MVRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
++R+ Y D V + +VD+ G L A L + K D W ++ +HG
Sbjct: 374 IMRNGYFSDRHVAN--SLVDMYAKCGALLLAHMLFDDIASK-DLVSWTVMIAGYGMHGFG 430
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYA 354
K A +AL + +A +S +YA
Sbjct: 431 KEA-IALFNQMRQAGIEADEISFVSLLYA 458
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/555 (40%), Positives = 331/555 (59%), Gaps = 45/555 (8%)
Query: 3 FGFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
FG+ +++ L+ +YS C L +A ++FD IP+R++ W +IR Y NG A+ L
Sbjct: 105 FGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSL 164
Query: 61 YYRLL------EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAAL 114
+ LL + + D+ + ACS + A IH VI+ ++ V VG L
Sbjct: 165 FKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTL 224
Query: 115 IDMYAKCS--CVVNARQVFDKILERD----------------PSEA-------------- 142
+D YAK V AR++FD+I+++D +EA
Sbjct: 225 LDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVT 284
Query: 143 ----TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
TL TV+ A + AL G+ +H R E +V V T+++DMY KCG V+ AR
Sbjct: 285 FNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKA 344
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLF 257
F++++ K V SW AMI GY MHGH+ KAL+LF M D V+P++ITFV VL+ACS GL
Sbjct: 345 FDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLH 404
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
EG +F +M + ++P ++HY CMVDLLG +G L +A DLI +M++KPD +W +LL
Sbjct: 405 VEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLA 464
Query: 318 SCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKS 377
+C++H +V+LAE+++ +L EL+ + G Y++LS+IYA A W+ V ++R +M +RG+ K
Sbjct: 465 ACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKP 524
Query: 378 IACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEK 437
S +E+ + H FL GD HP ++IY L L ++ EAGYV T SV HDV+ +EK
Sbjct: 525 PGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEK 584
Query: 438 ANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNR 497
+ HSE+LAIAFG++NT G+ + + KNL++C DCH IK ISKI +RE VRD R
Sbjct: 585 EMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKR 644
Query: 498 YHHFKDGICSCGDYW 512
+HHFKDG CSCGDYW
Sbjct: 645 FHHFKDGGCSCGDYW 659
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 184/380 (48%), Gaps = 58/380 (15%)
Query: 24 HNAHQLFDR-IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
N LF+R + + ++F WN +I A +G A+ + + ++ L P +FP A+KA
Sbjct: 26 QNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKA 85
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEA 142
CS+L I G++ H+ +++D+FV +ALI MY+ C + +AR+VFD+I +RD
Sbjct: 86 CSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSW 145
Query: 143 T---------------------------------------LVTVISASADIAALPQGREL 163
T LV+VISA + + A +
Sbjct: 146 TSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESI 205
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGL--VKVARNLFEQLREKRVVSWNAMITGYAMHG 221
H F + F+ V V L+D YAK G V VAR +F+Q+ +K VS+N++++ YA G
Sbjct: 206 HSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSG 265
Query: 222 HSTKALDLFEKM-KDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQH 279
S +A ++F ++ K++V + IT VL A S G G+ + ++R ++ V
Sbjct: 266 MSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIV 324
Query: 280 YTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
T ++D+ GR++ A +M+ K + W A++ +HGH K +EL
Sbjct: 325 GTSIIDMYCKCGRVETARKAFDRMKNK-NVRSWTAMIAGYGMHGHAA-------KALELF 376
Query: 340 PH--DAG---NYVILSNIYA 354
P D+G NY+ ++ A
Sbjct: 377 PAMIDSGVRPNYITFVSVLA 396
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG ++ T ++ +Y C + A + FDR+ +N+ W +I Y +G A+EL
Sbjct: 316 MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALEL 375
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRR 94
+ +++ G+ P+ TF L ACS EG R
Sbjct: 376 FPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWR 409
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/538 (39%), Positives = 323/538 (60%), Gaps = 35/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+HLY C + +A ++FD +P R++ W LI YA N + A+ L +L
Sbjct: 101 LDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGR 160
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P+ FTF LKA A ++ G +IH ++ W DV+VG+AL+DMYA+C + A
Sbjct: 161 FKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAI 220
Query: 129 QVFDKI------------------------------LERDPSEATLVT---VISASADIA 155
VFD++ ++R+ EAT T V SA A I
Sbjct: 221 AVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIG 280
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL QG+ +H + L+ V ++DMYAK G + AR +F+++ +K VV+WN+M+T
Sbjct: 281 ALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLT 340
Query: 216 GYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
+A +G +A+ FE+M+ V + ITF+ +L+ACS GGL EG+ +F+ M+++Y+++
Sbjct: 341 AFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFD-MMKEYNLE 399
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P + HY +VDLLG +G L++A I +M +KP VWGALL SC++H + K+ + A +
Sbjct: 400 PEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADH 459
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
+ EL+P D G V+L NIYA W+ A++RK+M G+KK ACSW+E++N H F++
Sbjct: 460 VFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVA 519
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
D +HP +EIY K + + ++++AGYVP T+ V V+ E+ + HSE++A+AF L
Sbjct: 520 NDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFAL 579
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
IN P G + I KN++IC DCH A ++ISK+ +REI VRD NR+HHF G CSCGDYW
Sbjct: 580 INMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSCGDYW 637
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 140/290 (48%), Gaps = 36/290 (12%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
+ AC+ ++++ R IH + +++ VF+ +LI +Y KC V +AR+VFD + RD
Sbjct: 71 ITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDM 130
Query: 139 ---------------PSEA-----------------TLVTVISASADIAALPQGRELHGF 166
P EA T +++ A+ A+ G ++H
Sbjct: 131 CSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHAL 190
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ ++ + +V V +AL+DMYA+CG + +A +F+QL K VSWNA+I G+A G
Sbjct: 191 TVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETT 250
Query: 227 LDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
L +F +M ++ + H T+ V SA + G ++G+ M++ + T ++D
Sbjct: 251 LLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNT-ILD 309
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+ SG + +A + ++ K D W ++L + +G + A E++
Sbjct: 310 MYAKSGSMIDARKVFDRVD-KKDVVTWNSMLTAFAQYGLGREAVTHFEEM 358
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 9/194 (4%)
Query: 128 RQVFDKILERDPSEATLV--TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
R D + R+ + + ++I+A A +L R +H +F +V + +L+ +
Sbjct: 49 RDTLDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHL 108
Query: 186 YAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITF 244
Y KCG V AR +F+ + + + SW ++I GYA + +AL L M + +P+ TF
Sbjct: 109 YCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTF 168
Query: 245 VGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
+L A G V+ D+H D V + ++D+ GR+D A + Q+
Sbjct: 169 ASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVG--SALLDMYARCGRMDMAIAVFDQL 226
Query: 304 RVKPDPGV-WGALL 316
K GV W AL+
Sbjct: 227 ESK--NGVSWNALI 238
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/535 (40%), Positives = 313/535 (58%), Gaps = 35/535 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ +YS C L +A +F + R++ + +I YA G A++L+ + E G+ PD
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 396
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+T L C+ ++EG+R+HE + N D+FV AL+DMYAKC + A VF
Sbjct: 397 VYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFS 456
Query: 133 KILERD----------------------------------PSEATLVTVISASADIAALP 158
++ +D P E T+ V+ A A ++A
Sbjct: 457 EMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFD 516
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
+GRE+HG+ R+ + + V +LVDMYAKCG + +A LF+ + K +VSW MI GY
Sbjct: 517 KGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYG 576
Query: 219 MHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
MHG +A+ LF +M+ ++ D I+FV +L ACS GL DEG FF M + I+P+V
Sbjct: 577 MHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTV 636
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+HY C+VD+L +G L +A I M + PD +WGALL C++H VKLAE EK+ E
Sbjct: 637 EHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE 696
Query: 338 LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDA 397
LEP + G YV+++NIYA A WE V +LRK + RG++K+ CSWIE+K + + F++GD+
Sbjct: 697 LEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDS 756
Query: 398 SHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINT 457
S+P + I A L+ + RM E GY P T+ D E EK +C HSE+LA+A G+I++
Sbjct: 757 SNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISS 816
Query: 458 PDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
G + +TKNL++C DCH KF+SK+T REI +RD NR+H FKDG CSC +W
Sbjct: 817 GHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 182/371 (49%), Gaps = 40/371 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF L +KL +Y+ C L A ++FD + WN+L+ A +G + +I L+
Sbjct: 124 GFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 183
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+++ G+ D++TF K+ S+L ++ G ++H ++++ + VG +L+ Y K
Sbjct: 184 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 243
Query: 122 SCVVNARQVFDKILERDPSE---------------------------------ATLVTVI 148
V +AR+VFD++ ERD AT+V+V
Sbjct: 244 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 303
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+ AD + GR +H + F + L+DMY+KCG + A+ +F ++ ++ VV
Sbjct: 304 AGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVV 363
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
S+ +MI GYA G + +A+ LFE+M++E + PD T VL+ C+R L DEG+ E
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE-W 422
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN----SCKLHG 323
+++ + + ++D+ G + EA + +MRVK D W ++ +C +
Sbjct: 423 IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGGYSKNCYANE 481
Query: 324 HVKLAELALEK 334
+ L L LE+
Sbjct: 482 ALSLFNLLLEE 492
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 150/371 (40%), Gaps = 74/371 (19%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFT 75
L + DC+ ++ FDR ++ N +R + +G E A++L + + P T
Sbjct: 44 LRTVSDCV-DSITTFDR----SVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--T 96
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI- 134
L+ C+ ++++G+ + + N + D +G+ L MY C + A +VFD++
Sbjct: 97 LCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVK 156
Query: 135 LERDPSEATLVTVISASADIA--------------------------------ALPQGRE 162
+E+ L+ ++ S D + ++ G +
Sbjct: 157 IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQ 216
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
LHGF + F V +LV Y K V AR +F+++ E+ V+SWN++I GY +G
Sbjct: 217 LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGL 276
Query: 223 STKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRM---------------FFES 266
+ K L +F +M ++ D T V V + C+ L GR F +
Sbjct: 277 AEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNT 336
Query: 267 MVRDYH---------------IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPD 308
++ Y D SV YT M+ G EA L +M + PD
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 396
Query: 309 PGVWGALLNSC 319
A+LN C
Sbjct: 397 VYTVTAVLNCC 407
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/548 (41%), Positives = 314/548 (57%), Gaps = 38/548 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF F + T L+ ++S C+ + A LF I + +L +N LI ++ NG E A++
Sbjct: 233 LGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKY 292
Query: 61 YYRLL----------EIGLVPDNFTFPFALKAC------------------SALSAIEEG 92
+ LL +GL+P + F AC +AL+ I
Sbjct: 293 FRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYS- 351
Query: 93 RRIHE-DVIRNKW----ETDVFVGAALIDMYAKCSCVVNARQVFDKIL--ERDPSEATLV 145
R++E D+ R + E V A+I YA+ A +F +++ E P+ T+
Sbjct: 352 -RLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTIT 410
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+++SA A + AL G+ +H E N+ V TAL+DMYAKCG + A LF+ EK
Sbjct: 411 SILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEK 470
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFF 264
V+WN MI GY +HG+ +AL LF +M QP +TF+ VL ACS GL EG F
Sbjct: 471 NTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIF 530
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+MV Y I+P +HY CMVD+LG +G+L++A + I +M V+P P VWG LL +C +H
Sbjct: 531 HAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKD 590
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
LA +A E+L EL+P + G YV+LSNIY+ N+ A +R+ + R + K+ C+ IE
Sbjct: 591 TNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIE 650
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
V H F+ GD SH IYAKL+ L G+M+E GY T + HDVE +EK M H
Sbjct: 651 VNGTPHVFVCGDRSHSQTTSIYAKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNVH 710
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SE+LAIAFGLI T GT + I KNL++C DCH A KFISKITER I VRD NR+HHFKDG
Sbjct: 711 SEKLAIAFGLITTEPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKDG 770
Query: 505 ICSCGDYW 512
ICSCGDYW
Sbjct: 771 ICSCGDYW 778
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 177/387 (45%), Gaps = 37/387 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + +A+ LV LY + A ++FD++P R+ LWN +I N Y+ +++++
Sbjct: 133 GFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVF 192
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ G+ D+ T L A + + ++ G I ++ + D +V LI +++KC
Sbjct: 193 KDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKC 252
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
V AR +F I + D S +T+V +I
Sbjct: 253 EDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLI 312
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
S+ L + GF + L V TAL +Y++ + +AR LF++ EK V
Sbjct: 313 PVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVA 372
Query: 209 SWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WNAMI+GYA G + A+ LF E M E P+ +T +LSAC++ G G+ + +
Sbjct: 373 AWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQ-L 431
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
++ +++ ++ T ++D+ G + EA L + + + W ++ LHG+
Sbjct: 432 IKSKNLEQNIYVSTALIDMYAKCGNISEASQL-FDLTSEKNTVTWNTMIFGYGLHGYGDE 490
Query: 328 AELALEKLIELEPHDAGNYVILSNIYA 354
A +++ L + LS +YA
Sbjct: 491 ALKLFNEMLHL-GFQPSSVTFLSVLYA 516
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 193/432 (44%), Gaps = 75/432 (17%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE-IGL 69
TKL +A LF +P+ ++FL+NVLI+ ++++ P +I Y LL+ L
Sbjct: 44 TKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFS-PDASSISFYTHLLKNTTL 102
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
PDNFT+ FA+ SA G +H + + +++++FV +AL+D+Y K S V AR+
Sbjct: 103 SPDNFTYAFAI---SASPDDNLGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARK 159
Query: 130 VFDKILERDP---------------------------------SEATLVTVISASADIAA 156
VFDK+ +RD T+ TV+ A A++
Sbjct: 160 VFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQE 219
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
+ G + + + F + V T L+ +++KC V AR LF +R+ +VS+NA+I+G
Sbjct: 220 VKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISG 279
Query: 217 YAMHGHSTKALDLFEKMKDEVQ-PDHITFVGV-----------LSACSRGGLFDEGRMFF 264
++ +G + A+ F ++ Q T VG+ L+ C +G G +
Sbjct: 280 FSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQ 339
Query: 265 ESM-------------------VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM-- 303
S+ + D + +V + M+ SG + A L +M
Sbjct: 340 PSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMT 399
Query: 304 -RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYV--ILSNIYARAANWE 360
P+P ++L++C G + + ++ +LI+ + + YV L ++YA+ N
Sbjct: 400 TEFTPNPVTITSILSACAQLGALSFGK-SVHQLIKSKNLEQNIYVSTALIDMYAKCGNIS 458
Query: 361 GVAKLRKLMIDR 372
++L L ++
Sbjct: 459 EASQLFDLTSEK 470
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/541 (39%), Positives = 327/541 (60%), Gaps = 37/541 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+ L++LY+ C L A +LFD + R++ W LI Y+ + + A+ L +L I
Sbjct: 51 VMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRI 110
Query: 68 GLVPDNFTFPFALKACSALSAIE--EGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
GL P+ FT LKA S + + + +GR++H +R ++++V+V A++DMYA+C +
Sbjct: 111 GLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLE 170
Query: 126 NARQVFDKILERD---------------------------------PSEATLVTVISASA 152
A+ +FD ++ ++ P+ T +V+ A A
Sbjct: 171 EAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACA 230
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+ +L QG+ +H + +L V L+DMYAK G ++ A+ +F++L ++ VVSWN+
Sbjct: 231 SMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNS 290
Query: 213 MITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
M+TGY+ HG AL FE+M + + P+ ITF+ VL+ACS GL DEGR +F+ M++ Y
Sbjct: 291 MLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFD-MMKKY 349
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
+++P + HY MVDLLG +G LD A I +M +KP VWGALL +C++H +++L A
Sbjct: 350 NVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYA 409
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHA 391
E + EL+ H G +V+L NIYA A W AK+RK+M + G+KK ACSW+E++N+ H
Sbjct: 410 AECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHV 469
Query: 392 FLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIA 451
F++ D +HP EI+ + + ++KE GYVP + V ++ E+ + HSE+LA+A
Sbjct: 470 FVADDDAHPQRREIHNMWEQISDKIKEIGYVPDSSHVLLCMDQQEREAKLQYHSEKLALA 529
Query: 452 FGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
F L+NTP G+ + I KN++IC DCH A KF+SK+ EREI VRD NR+HHF DG CSC DY
Sbjct: 530 FALLNTPPGSTIRIKKNIRICGDCHSAFKFVSKLVEREIIVRDTNRFHHFCDGACSCEDY 589
Query: 512 W 512
W
Sbjct: 590 W 590
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 160/309 (51%), Gaps = 40/309 (12%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
LK C+ L+ + EG+ IH ++ +++ D+ + L+++YAKC +V AR++FD++ RD
Sbjct: 22 LKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDV 81
Query: 139 --------------------------------PSEATLVTVISASADIAA--LPQGRELH 164
P++ TL +++ A++ + + + QGR+LH
Sbjct: 82 VTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLH 141
Query: 165 GFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST 224
G R+ ++ NV V A++DMYA+C ++ A+ +F+ + K VSWNA+I GYA G
Sbjct: 142 GLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGD 201
Query: 225 KALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
KA LF M ++ V+P H T+ VL AC+ G ++G+ M++ + T +
Sbjct: 202 KAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNT-L 260
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI--ELEPH 341
+D+ SG +++A + ++ K D W ++L HG K+A E+++ + P+
Sbjct: 261 LDMYAKSGSIEDAKKVFDRL-AKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPN 319
Query: 342 DAGNYVILS 350
D +L+
Sbjct: 320 DITFLCVLT 328
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 5/174 (2%)
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
T++ + L +G+ +H RF ++ ++ L+++YAKCG + AR LF+++ +
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 206 RVVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFD--EGRM 262
VV+W A+ITGY+ H AL L E ++ ++P+ T +L A S G D +GR
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
+R Y D +V ++D+ L+EA LI + V + W AL+
Sbjct: 140 LHGLCLR-YGYDSNVYVSCAILDMYARCHHLEEA-QLIFDVMVSKNEVSWNALI 191
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/514 (42%), Positives = 310/514 (60%), Gaps = 11/514 (2%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G HP+L KL Y++ L + LF R ++F W +I +A G A +L+
Sbjct: 57 GLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGDVVSAQQLF 116
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ E LV A+ C A + R+ D + E D +ID Y +
Sbjct: 117 DTMPEKSLVSLT-----AMLTCYAKHGELDAARVLFDGME---ERDGVCWNVMIDGYTQN 168
Query: 122 SCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
A +F ++L+ P+E T+++V+SA + AL GR +H + + + NV V
Sbjct: 169 GMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVG 228
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQ 238
TALVDMY+KCG ++ AR +F+++ +K VV+WN+MI GYAMHG S +AL LF+ M + +
Sbjct: 229 TALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLH 288
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
P +ITF+G+LSAC G EG F M +Y I+P ++HY CMV+LLG +G +++A +
Sbjct: 289 PTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYE 348
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN 358
L+ M ++PDP +WG LL +C+LHG + L E +E L++ ++G Y++LSNIYA N
Sbjct: 349 LVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGN 408
Query: 359 WEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKE 418
W+GVA+LR +M D G+KK CS IEV NK H FL+G +HP EIY L+ + G +K
Sbjct: 409 WDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKS 468
Query: 419 AGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIA 478
GY P T+ V HD+ EK + HSE+LAIAFGLINT GT + I KNL++C DCH
Sbjct: 469 HGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEV 528
Query: 479 IKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
K ISKIT R+I VRD NR+HHF +G CSCGDYW
Sbjct: 529 TKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 562
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 14/183 (7%)
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF 199
S L +I S I+ L Q +H +RH + + + L YA G + + LF
Sbjct: 29 STNRLAVLIDKSKTISHLLQ---IHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALF 85
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDE 259
+ + V W A+I G+A+ G A LF+ M ++ ++ +L+ ++ G D
Sbjct: 86 GRTQNPSVFFWTAIIHGHALRGDVVSAQQLFDTMPEK---SLVSLTAMLTCYAKHGELDA 142
Query: 260 GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM---RVKPDPGVWGALL 316
R+ F+ M + + M+D +G +EA L +M + KP+ ++L
Sbjct: 143 ARVLFDGMEERDGVC-----WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVL 197
Query: 317 NSC 319
++C
Sbjct: 198 SAC 200
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/519 (41%), Positives = 305/519 (58%), Gaps = 46/519 (8%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G F +AT L+ LY C +++A ++FD + R++ WN L+ Y +G + A+ +
Sbjct: 200 IGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAI 259
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+ +V W T +I Y++
Sbjct: 260 FERMPWRNIV--------------------------------SWTT-------MISGYSQ 280
Query: 121 CSCVVNARQVFDKILERD----PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
A +FD++++ D P+ T+++V+ A A ++ L +GR++H + R N
Sbjct: 281 SGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNA 340
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLR--EKRVVSWNAMITGYAMHGHSTKALDLFEKM- 233
V AL MYAKCG + ARN F++L EK +++WN MIT YA +GH +A+ F +M
Sbjct: 341 SVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMI 400
Query: 234 KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
+ +QPD ITF G+LS CS GL D G +F M Y I+P V+HY C+ DLLG +GRL
Sbjct: 401 QAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRL 460
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIY 353
EA L+ +M + P +WG+LL +C+ H ++++AE A KL LEP + GNYV+LSN+Y
Sbjct: 461 AEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMY 520
Query: 354 ARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLE 413
A A W+ V KLR ++ +G KKS CSWIE+ KAH FL GD SHP EIY L+ L
Sbjct: 521 AEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALP 580
Query: 414 GRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICD 473
+MK AGY P T V HD+ +EK + HSE+LA+AFG++NTP T L +TKNL+IC
Sbjct: 581 EKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICG 640
Query: 474 DCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
DCH A+ FIS+I RE+ VRD+NR+HHFK G CSCGDYW
Sbjct: 641 DCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 679
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 164/347 (47%), Gaps = 46/347 (13%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P ++ +K+V Y++ + ++ +F+ I + + L+N +IRAYA G E + Y
Sbjct: 100 GLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATY 159
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + G D FTFPF LK+ L ++ G+ +H ++R + D++V +LI +Y KC
Sbjct: 160 FSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKC 219
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
+ +A +VFD + RD S SW A
Sbjct: 220 GEINDAGKVFDNMTIRDVS--------------------------SWN-----------A 242
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE---VQ 238
L+ Y K G + A +FE++ + +VSW MI+GY+ G + +AL LF++M E V+
Sbjct: 243 LLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVR 302
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
P+ +T + VL AC++ + GR E R ++ + + + G L +A +
Sbjct: 303 PNWVTIMSVLPACAQLSTLERGRQIHELACR-MGLNSNASVLIALTAMYAKCGSLVDARN 361
Query: 299 LIMQM-RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHD 342
++ R + + W ++ + +GH A ++I+ ++P D
Sbjct: 362 CFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDD 408
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/549 (38%), Positives = 326/549 (59%), Gaps = 38/549 (6%)
Query: 2 GFGFHPVLATKLVHLYSAC---DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYE-VA 57
G + LV +Y+ C + +A ++FDR+P N+ W +I Y +G + A
Sbjct: 175 GLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREA 234
Query: 58 IELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDM 117
IEL+ +++ + P++FTF LKAC+ LS I G +++ V++ + + VG +LI M
Sbjct: 235 IELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISM 294
Query: 118 YAKCSCVVNARQVFDKILERD----------------PSEA-----------------TL 144
Y++C + NAR+ FD + E++ EA T
Sbjct: 295 YSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTF 354
Query: 145 VTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE 204
+++S ++ I A+ +G ++H + F+ N+ + AL+ MY++CG ++ A +F ++ +
Sbjct: 355 ASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGD 414
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMF 263
V+SW +MITG+A HG +T+AL+ F KM + V P+ +T++ VLSACS GL EG
Sbjct: 415 GNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKH 474
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
F+SM ++ I P ++HY C+VDLLG SG L+EA +L+ M K D V L +C++HG
Sbjct: 475 FKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHG 534
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
++ L + A E ++E +PHD Y++LSN++A A WE VA++RK M +R + K CSWI
Sbjct: 535 NMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWI 594
Query: 384 EVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICC 443
EV+NK H F GD SHP EIY +L L ++KE GY+P T+ V HDVE ++K +
Sbjct: 595 EVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEEQKEQYLFQ 654
Query: 444 HSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKD 503
HSE++A+A+G I+T + + KNL++C DCH A K+ S + +EI +RD NR+HHFKD
Sbjct: 655 HSEKIAVAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDANRFHHFKD 714
Query: 504 GICSCGDYW 512
G CSC DYW
Sbjct: 715 GTCSCNDYW 723
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 184/394 (46%), Gaps = 46/394 (11%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L +A+++FDR+P RN+ W ++I + G A++L+ ++ G VPD FT + A
Sbjct: 95 LESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSA 154
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC---SCVVNARQVFDKI----- 134
C+ + + GR+ H V+++ + DV VG +L+DMYAKC V +AR+VFD++
Sbjct: 155 CAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNV 214
Query: 135 ---------------LERD--------------PSEATLVTVISASADIAALPQGRELHG 165
+R+ P+ T +V+ A A+++ + G +++
Sbjct: 215 MSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYA 274
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
+ R V +L+ MY++CG ++ AR F+ L EK +VS+N ++ YA +S +
Sbjct: 275 LVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEE 334
Query: 226 ALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMV 284
A +LF +++ + TF +LS S G +G +++ ++ ++
Sbjct: 335 AFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKS-GFKSNLHICNALI 393
Query: 285 DLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGHVKLAELALEKLIE--LEP 340
+ G ++ A + +M D V W +++ HG A K++E + P
Sbjct: 394 SMYSRCGNIEAAFQVFNEM---GDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSP 450
Query: 341 HDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
++ +LS EG+ + + ++ GI
Sbjct: 451 NEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGI 484
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 133/258 (51%), Gaps = 40/258 (15%)
Query: 35 QRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRR 94
+R+L W+ LI YA N AI ++ +LE G P+ + F +ACS I G+
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 95 IHEDVIRNKW-ETDVFVGAALIDMYAKCSC-VVNARQVFDKILERD-------------- 138
I +++ + E+DV VG ALIDM+ K + + +A +VFD++ +R+
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 139 -------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
P TL V+SA A++ L GR+ H + +L+V V
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183
Query: 180 TALVDMYAKC---GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK-ALDLF-EKMK 234
+LVDMYAKC G V AR +F+++ V+SW A+ITGY G + A++LF E ++
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243
Query: 235 DEVQPDHITFVGVLSACS 252
+V+P+H TF VL AC+
Sbjct: 244 GQVKPNHFTFSSVLKACA 261
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/504 (41%), Positives = 319/504 (63%), Gaps = 17/504 (3%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +FDRI + N F+WN +IR Y+ + E A+ LY+ +L + + +TFPF LKACS+
Sbjct: 71 ARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSS 130
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPS----- 140
+SA+EE ++IH +I+ + ++++ +L+++Y+K + +AR +FD++ +RD
Sbjct: 131 MSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTEALNLF 190
Query: 141 -----------EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC 189
LV+ + A AD+ L QG+ +H + +H E++ + L+DMYAKC
Sbjct: 191 HRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKC 250
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVL 248
G ++ A +F ++ EK V W AMI+GYA+HG +AL+ F KM+ V+P+ +TF G+L
Sbjct: 251 GDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGIL 310
Query: 249 SACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPD 308
+ACS GL E ++ FESM R + PS++HY CMVDLLG +G L EA +LI M VKP+
Sbjct: 311 TACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPN 370
Query: 309 PGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKL 368
+WGALLN+C +HG+++L + + LI+++P G Y+ L++I+A A W A++R+
Sbjct: 371 AAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQ 430
Query: 369 MIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESV 428
M ++G+ K CS I V AH FL+GD SHP EI L+ + R++E GY P +
Sbjct: 431 MKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDL 490
Query: 429 FHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITER 488
D+E+ EK I HSE+LA+ FGLI+T G + I KNL++C+DCH IK ISK+ R
Sbjct: 491 LLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAR 550
Query: 489 EITVRDVNRYHHFKDGICSCGDYW 512
EI +RD R+H FKDG C+CGDYW
Sbjct: 551 EILMRDRTRFHLFKDGNCTCGDYW 574
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P+L L+ +Y+ C L A ++F ++ ++ + +W +I YA +G A+E + ++
Sbjct: 237 PILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQT 296
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR-NKWETDVFVGAALIDMYAKCSCVV 125
G+ P+ TF L ACS + E + + E + R + ++ + ++D+ + +
Sbjct: 297 AGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLK 356
Query: 126 NARQVFDKI 134
A ++ + +
Sbjct: 357 EAEELIENM 365
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 116/293 (39%), Gaps = 56/293 (19%)
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAK--CGLVKVARNLFEQLREKRVVSWNAMITGYA 218
R++HG + L+ + L+ A G + AR +F+++ WN MI GY+
Sbjct: 35 RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYS 94
Query: 219 MHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
+AL L+ M P + TF +L ACS +E + +++ +
Sbjct: 95 NSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIK-MGFGSEI 153
Query: 278 QHYTCMVDLLGHSG--------------RLDEACDLIMQMR---VKPDPGVWGALLNSCK 320
++++ SG R EA +L +M+ +K D + L +C
Sbjct: 154 YTTNSLLNVYSKSGDIKSARLLFDQVDQRDTEALNLFHRMQTAGIKLDNVALVSTLQACA 213
Query: 321 ----------LHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMI 370
+H ++K E+ ++ ++ +L ++YA+ + E ++ + M
Sbjct: 214 DLGVLDQGKWIHAYIKKHEIEIDPILG---------CVLIDMYAKCGDLEEAIEVFRKME 264
Query: 371 DRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVP 423
++G+ W A +SG A H E L+W +M+ AG P
Sbjct: 265 EKGVS-----VWT-------AMISGYAIHGRGRE---ALEWFM-KMQTAGVEP 301
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/544 (40%), Positives = 319/544 (58%), Gaps = 36/544 (6%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
F +A LV +Y+ L +A ++FD +P+R+L LWN LI + +G + + L++R+
Sbjct: 339 FDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRM 398
Query: 65 LEIGLVPD--NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+ GL D T LK+ ++ AI R++H + +D V LID Y KC
Sbjct: 399 RKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCG 458
Query: 123 CVVNARQVF-----DKILER----------------------------DPSEATLVTVIS 149
+ A +VF D I+ +P L ++++
Sbjct: 459 QLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLN 518
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A ++A QG+++H + +F +V ALV YAKCG ++ A F L E+ +VS
Sbjct: 519 ACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVS 578
Query: 210 WNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
W+AMI G A HGH +ALDLF +M DE V P+HIT VLSAC+ GL D+ + +FESM
Sbjct: 579 WSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMK 638
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ ID + +HY CM+D+LG +G+L++A +L+ M + + VWGALL + ++H +L
Sbjct: 639 ETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELG 698
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
+A EKL LEP +G +V+L+N YA A W+ +AK+RKLM D +KK A SW+E+K+K
Sbjct: 699 RMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDK 758
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
H F+ GD SHP +IY KL L M +AGYVP E HDV+ EK ++ HSERL
Sbjct: 759 VHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERL 818
Query: 449 AIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
A+AF LI+TP G + + KNL+IC DCH+A K+ISKI REI +RD+NR+HHF +G CSC
Sbjct: 819 AVAFALISTPSGAPIRVKKNLRICRDCHVAFKYISKIVSREIIIRDINRFHHFTNGTCSC 878
Query: 509 GDYW 512
GDYW
Sbjct: 879 GDYW 882
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 180/408 (44%), Gaps = 53/408 (12%)
Query: 4 GFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
G + L+ LYS C A +FD IP W+ L+ AY+ NG A+ +
Sbjct: 34 GLLAGFSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRA 93
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
+ G+ + F P LK C+ + G ++H + + DVFV AL+ +Y
Sbjct: 94 MRGRGVPCNEFALPVVLK-CA--PDVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGM 150
Query: 124 VVNARQVFDKIL----ERD---------------------------------PSEATLVT 146
V AR++FD+ + ER+ P+E
Sbjct: 151 VDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSC 210
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V++A L GR++HG R +E +V ALVDMY+K G +++A +FE++
Sbjct: 211 VVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAAD 270
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
VVSWNA I+G HGH +AL+L +MK + P+ T VL AC+ G F+ GR
Sbjct: 271 VVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHG 330
Query: 266 SMVRDY-HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK---L 321
MV+ D V +VD+ G LD+A + + D +W AL++ C
Sbjct: 331 FMVKAVADFDEFVA--VGLVDMYAKHGFLDDARK-VFDFMPRRDLILWNALISGCSHDGR 387
Query: 322 HGHVKLAELALEKLIELEPHDAG-NYVILSNIYARAANWEGVAKLRKL 368
HG V L+L + E D N L+++ A+ E + R++
Sbjct: 388 HGEV----LSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQV 431
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 176/391 (45%), Gaps = 45/391 (11%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
A LV +YS + A +F+++P ++ WN I +G A+EL ++ GL
Sbjct: 243 ANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGL 302
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
VP+ FT LKAC+ A GR+IH +++ + D FV L+DMYAK + +AR+
Sbjct: 303 VPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARK 362
Query: 130 VFDKI-----------------------------------LERDPSEATLVTVISASADI 154
VFD + L+ D + TL +V+ ++A
Sbjct: 363 VFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASS 422
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
A+ R++H + + + V L+D Y KCG + A +F++ R ++S M+
Sbjct: 423 EAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMM 482
Query: 215 TGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
T + H A+ LF +M + ++PD +L+AC+ +++G+ +++
Sbjct: 483 TALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIK-RQF 541
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGHVKLAELA 331
V +V G +++A M P+ G+ W A++ HGH K A
Sbjct: 542 TSDVFAGNALVYAYAKCGSIEDA---DMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDL 598
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGV 362
++ L+ A N++ L+++ + A N G+
Sbjct: 599 FHRM--LDEGVAPNHITLTSVLS-ACNHAGL 626
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/518 (38%), Positives = 321/518 (61%), Gaps = 14/518 (2%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ +YS C L A ++F+++ +RN+ W +I Y +G + AI+L ++ + G
Sbjct: 288 FSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEG 347
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D L AC+ +++ G+ +H+ + N E+++FV AL+DMYAKC + A
Sbjct: 348 VKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAAN 407
Query: 129 QVFDKILERD------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
VF ++ +D P T+ V+ A A ++AL +G+E+HG+ R+ + +
Sbjct: 408 SVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDR 467
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE 236
V ALVD+Y KCG++ +AR LF+ + K +VSW MI GY MHG+ +A+ F +M+D
Sbjct: 468 HVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDA 527
Query: 237 -VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
++PD ++F+ +L ACS GL ++G FF M D++I+P ++HY CMVDLL +G L +
Sbjct: 528 GIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSK 587
Query: 296 ACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYAR 355
A + + + + PD +WGALL C+ + ++LAE E++ ELEP + G YV+L+NIYA
Sbjct: 588 AYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAE 647
Query: 356 AANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG-DASHPNCDEIYAKLKWLEG 414
A WE V +LR+ + +G++K+ CSWIE+K K + F+SG ++SHP+ I + LK +
Sbjct: 648 AEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRR 707
Query: 415 RMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDD 474
+MKE G+ P T+ + + +K +C HSE+LA+AFGL+ P + +TKNL++C D
Sbjct: 708 KMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGD 767
Query: 475 CHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
CH KF+SK T REI +RD NR+HHFKDG CSC +W
Sbjct: 768 CHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 152/322 (47%), Gaps = 28/322 (8%)
Query: 4 GFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
G L KLV Y+ C L ++FD + ++N++LWN ++ YA G ++ +I L+
Sbjct: 131 GVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKI 190
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHE--DVIRNKWETDVFVGAALIDMYAKC 121
++E G+ EG+R ++ + DV ++I Y
Sbjct: 191 MVEKGI---------------------EGKRPESAFELFDKLCDRDVISWNSMISGYVSN 229
Query: 122 SCVVNARQVFDKI--LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
++ ++ L D AT+++V+ A+ L G+ +H + + FE +
Sbjct: 230 GLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFS 289
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQ 238
L+DMY+KCG + A +FE++ E+ VVSW +MI GY G S A+ L ++M+ E V+
Sbjct: 290 NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVK 349
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
D + +L AC+R G D G+ + ++ +++ ++ ++D+ G ++ A
Sbjct: 350 LDVVAITSILHACARSGSLDNGKDVHD-YIKANNMESNLFVCNALMDMYAKCGSMEAANS 408
Query: 299 LIMQMRVKPDPGVWGALLNSCK 320
+ M VK D W ++ K
Sbjct: 409 VFSTMVVK-DIISWNTMIGELK 429
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 30/300 (10%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
F P+ ++ + SA HQ+ D +N I + G E A+EL
Sbjct: 42 FSPIFSSCIPIRISATPTRTIDHQVTD---------YNAKILHFCQLGDLENAMELICMC 92
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
+ L + T+ L+ C+ L + +G+++H + N D +G L+ YA C +
Sbjct: 93 QKSEL--ETKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDL 150
Query: 125 VNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVD 184
R+VFD + +++ ++S A I F+ ++ + +V+
Sbjct: 151 KEGRRVFDTMEKKNVYLWNF--MVSEYAKIG---------------DFKESICLFKIMVE 193
Query: 185 MYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHIT 243
+ + A LF++L ++ V+SWN+MI+GY +G + + L ++++M + D T
Sbjct: 194 KGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLAT 253
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
+ VL C+ G G+ S+ + + ++D+ G LD A + +M
Sbjct: 254 IISVLVGCANSGTLSLGKA-VHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKM 312
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 34/262 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ +A LV LY C L A LFD IP ++L W V+I Y +G AI +
Sbjct: 462 GYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATF 521
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMYA 119
+ + G+ PD +F L ACS +E+G R +++N + + + A ++D+ +
Sbjct: 522 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY-IMKNDFNIEPKLEHYACMVDLLS 580
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHR-----FEL 174
+ + A + + TL A+ A L R H + FEL
Sbjct: 581 RTGNLSKAYEFME----------TLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFEL 630
Query: 175 ---NVKVKTALVDMYAKCGLVKVARNLFEQ-----LREKRVVSW-------NAMITG-YA 218
N L ++YA+ + + L E+ LR+ SW N ++G +
Sbjct: 631 EPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNS 690
Query: 219 MHGHSTKALDLFEKMKDEVQPD 240
H HS L +KM+ +++ +
Sbjct: 691 SHPHSKNIESLLKKMRRKMKEE 712
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/536 (39%), Positives = 317/536 (59%), Gaps = 47/536 (8%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
++ Y+ L A +LF+ +P R++F W ++ + NG + A ++ + E V
Sbjct: 252 MITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSW 311
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDV-IRN--KWETDVFVGAALIDMYAKCSCVVNARQ 129
N +++ IE+ R + + + RN W T ++ YA+C + A+
Sbjct: 312 NAMIAGYVQS----QQIEKARELFDQMPSRNTSSWNT-------MVTGYAQCGNIDQAKI 360
Query: 130 VFDKILERD---------------------------------PSEATLVTVISASADIAA 156
+FD++ +RD + + L +S+ A+IAA
Sbjct: 361 LFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAA 420
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
L G++LHG + F+ AL+ MY KCG ++ A ++FE + EK +VSWN MI G
Sbjct: 421 LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480
Query: 217 YAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
YA HG +AL LFE MK ++PD +T VGVLSACS GL D+G +F SM ++Y I +
Sbjct: 481 YARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITAN 540
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
+HYTCM+DLLG +GRLDEA +L+ M PD WGALL + ++HG +L E A EK+
Sbjct: 541 AKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVF 600
Query: 337 ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGD 396
E+EP ++G YV+LSN+YA + W V ++R M D+G+KK SW+E++NK H F GD
Sbjct: 601 EMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGD 660
Query: 397 ASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLIN 456
SHP + IYA L+ L+ +K+ G+V T+ V HDVE +EK +M+ HSE+LA+AFG+++
Sbjct: 661 CSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILS 720
Query: 457 TPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
P G + + KNL++C+DCH AIK ISKIT+R+I VRD NR+HHF +G CSCGDYW
Sbjct: 721 IPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 149/321 (46%), Gaps = 38/321 (11%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L A LF+++P++++ WN ++ +A NG E A +++ ++L V + ++ L A
Sbjct: 138 LSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQML----VKNEISWNGLLSA 193
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEA 142
IE+ RR+ + +K + ++ L+ Y + + +AR +FD++ RD +
Sbjct: 194 YVQNGRIEDARRLFD----SKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRD--KI 247
Query: 143 TLVTVISASADIAALPQGRELHG-------FSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
+ +I+ A L + R L F+W TA+V + + G++ A
Sbjct: 248 SWNIMITGYAQNGLLSEARRLFEELPIRDVFAW-----------TAMVSGFVQNGMLDEA 296
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGG 255
+FE++ EK VSWNAMI GY KA +LF++M T V + C G
Sbjct: 297 TRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQC---G 353
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
D+ ++ F+ M + I + M+ SG+ +EA L ++M K D G+
Sbjct: 354 NIDQAKILFDEMPQRDCIS-----WAAMISGYAQSGQSEEALHLFIKM--KRDGGILNRS 406
Query: 316 LNSCKLHGHVKLAELALEKLI 336
+C L ++A L L K +
Sbjct: 407 ALACALSSCAEIAALELGKQL 427
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDH 241
++ Y K G + AR LF Q+ EK VVSWNAM++G+A +G +A +F++M + +
Sbjct: 128 MLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM---LVKNE 184
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
I++ G+LSA + G ++ R F+S +D + + C++ RLD+A L
Sbjct: 185 ISWNGLLSAYVQNGRIEDARRLFDS-----KMDWEIVSWNCLMGGYVRKKRLDDARSLFD 239
Query: 302 QMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+M V+ D W ++ +G + A E+L
Sbjct: 240 RMPVR-DKISWNIMITGYAQNGLLSEARRLFEEL 272
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHI 242
+ Y + G + A ++F +R + V++NAMI+GY + A +FEKM D D I
Sbjct: 67 ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDR---DLI 123
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
++ +LS + G R F M + V + M+ +G ++EA + Q
Sbjct: 124 SWNVMLSGYVKNGNLSAARALFNQMP-----EKDVVSWNAMLSGFAQNGFVEEARKIFDQ 178
Query: 303 MRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
M VK + W LL++ +G ++ A + ++ E
Sbjct: 179 MLVKNEIS-WNGLLSAYVQNGRIEDARRLFDSKMDWE 214
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 10/210 (4%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+ +Y C + A +F+ I ++++ WN +I YA +G + A+ L
Sbjct: 435 GFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALAL- 493
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWET-DVFVGAALIDMYAK 120
+ +++ + PD+ T L ACS +++G + +N T + +ID+ +
Sbjct: 494 FESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGR 553
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL---NVK 177
+ A + K + P AT ++ AS + EL + FE+ N
Sbjct: 554 AGRLDEALNLM-KSMPFYPDAATWGALLGAS----RIHGDTELGEKAAEKVFEMEPDNSG 608
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ L ++YA G + R + ++R+K V
Sbjct: 609 MYVLLSNLYAASGRWREVREMRSKMRDKGV 638
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/534 (39%), Positives = 326/534 (61%), Gaps = 35/534 (6%)
Query: 14 VHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDN 73
++++ L +A +LF+ + R++ WN++I Y N + A+ L+ RL + G+ ++
Sbjct: 249 MNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKAND 308
Query: 74 FTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS----------- 122
TF L ++L+++ +G+ IHE V ++ DV V AL+ +Y +C
Sbjct: 309 ITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVD 368
Query: 123 ------------CVVNARQVFDK----------ILERDPSEATLVTVISASADIAALPQG 160
CV A+ F K + R P+ ATLV V+ A +AAL +G
Sbjct: 369 MGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKG 428
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMH 220
R++H + F + + V+TAL++MY KCG + AR++FE++ ++ ++ WN+M+ YA H
Sbjct: 429 RQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQH 488
Query: 221 GHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQH 279
G+ + L LF +M+ D + D ++FV VLSA S G +G +F +M++D+ I P+ +
Sbjct: 489 GYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPEL 548
Query: 280 YTCMVDLLGHSGRLDEACDLIMQMR-VKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
Y C+VDLLG +GR+ EA D+++++ PD +W LL +C+ H A+ A E+++E
Sbjct: 549 YGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLER 608
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDAS 398
+P +G YV+LSN+YA A +W+GV ++RKLM RG+KK S IE+ N+ H FL GD S
Sbjct: 609 DPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRS 668
Query: 399 HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTP 458
HP IYA+L L M+ AGY+P T+ + HDVE++ K +M+ HSERLAIAFGL++TP
Sbjct: 669 HPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLMSTP 728
Query: 459 DGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
GT L + KNL++C DCH A K+ISK+ REI VRD +R+H+FKDG CSC DYW
Sbjct: 729 PGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 782
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 185/372 (49%), Gaps = 37/372 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + ++ L+ +Y+ C + A Q+F+ + ++++F W +I Y G Y+ A+ ++
Sbjct: 35 GFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMF 94
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
Y++ E ++P T+ L AC++ ++++G IH +++ +E DVFVG ALI+MY KC
Sbjct: 95 YQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKC 154
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
V A F ++ RD P++ TL TV
Sbjct: 155 GSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVF 214
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A D L +G+ ++ E +V+V + ++M+ GL+ AR LFE + ++ VV
Sbjct: 215 NAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVV 274
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WN +IT Y + + +A+ LF ++ +D ++ + ITFV +L+ + +G++ E +
Sbjct: 275 TWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHE-L 333
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
V++ D V T ++ L G +A + + M K D W + + +G K
Sbjct: 334 VKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSK-DVITWTVMCVAYAQNGFRKE 392
Query: 328 AELALEKLIELE 339
A L L + ++LE
Sbjct: 393 A-LQLFQEMQLE 403
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 188/413 (45%), Gaps = 40/413 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + T L+++Y+ C + A F R+ R++ W +I A + + +A LY
Sbjct: 136 GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLY 195
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+ G+VP+ T A + EG+ I+ V E+DV V + ++M+
Sbjct: 196 RRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNA 255
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +AR++F+ +++RD ++ T V ++
Sbjct: 256 GLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLML 315
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+ + +L +G+ +H ++ +V V TAL+ +Y +C A +F + K V+
Sbjct: 316 NVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVI 375
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W M YA +G +AL LF++M+ E +P T V VL C+ +GR +
Sbjct: 376 TWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHI 435
Query: 268 VRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV- 325
+ + + ++ V+ T ++++ G G++ EA + +M K D VW ++L + HG+
Sbjct: 436 IENGFRMEMVVE--TALINMYGKCGKMAEARSVFEKM-AKRDILVWNSMLGAYAQHGYYD 492
Query: 326 KLAELALEKLIELEPHDAGNYV-ILSNIYARAANWEGVAKLRKLMIDRGIKKS 377
+ +L + ++ E DA ++V +LS + + +G ++ D I +
Sbjct: 493 ETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPT 545
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 131/282 (46%), Gaps = 38/282 (13%)
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD F L+ CS+ ++ GRR+H V +E + V LI MYA+C V A+QV
Sbjct: 3 PDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 62
Query: 131 FDKILERD----------------------------------PSEATLVTVISASADIAA 156
F+ ILER P++ T V +++A A +
Sbjct: 63 FE-ILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
L G E+HG + FE +V V TAL++MY KCG V+ A + F++L + VVSW AMI
Sbjct: 122 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 181
Query: 217 YAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
H A L+ +M+ D V P+ IT V +A EG+ F S+V ++
Sbjct: 182 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGK-FIYSLVSSRVMES 240
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
V+ +++ G++G L +A L M V D W ++
Sbjct: 241 DVRVMNSAMNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVIT 281
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 3/191 (1%)
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P A V ++ + + GR +H FE N V L+ MYA+CG V A+ +
Sbjct: 3 PDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 62
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLF 257
FE L K V +W MI Y G +AL +F +M++E V P +T+V +L+AC+
Sbjct: 63 FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 122
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
+G M + + V T ++++ G + A D ++ + D W A++
Sbjct: 123 KDG-MEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHR-DVVSWTAMIA 180
Query: 318 SCKLHGHVKLA 328
+C H LA
Sbjct: 181 ACVQHDQFALA 191
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/498 (44%), Positives = 306/498 (61%), Gaps = 15/498 (3%)
Query: 23 LHNAHQLFDRIPQRN--LFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
H A Q+F + ++ F+WN ++A A AI L+YRL + + PD FT L
Sbjct: 109 FHYAQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVL 168
Query: 81 KACSALSAIEEGRRIH---EDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER 137
+AC L + GR +H E V W ++I Y +C A +F K+ E
Sbjct: 169 RACLNLLDLSNGRILHGVVEKVGFRSW-------TSMIAGYVQCGKAKEAIHLFAKMEEA 221
Query: 138 DP--SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
+E T+V V++A AD+ AL G +H +S RH F+ NV++ L+DMY KCG ++ A
Sbjct: 222 GVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEA 281
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRG 254
+FE++ E+ VVSW+AMI G AMHG + +AL LF M ++P+ +TF+G+L ACS
Sbjct: 282 CKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHM 341
Query: 255 GLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGA 314
GL EGR FF SM RDY I P ++HY CMVDLL +G L EA + I+ M +KP+ VWGA
Sbjct: 342 GLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGA 401
Query: 315 LLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
LL +C++H +V++AE A++ L+EL+P + G YV+LSNIYA A WE A++RK M DR +
Sbjct: 402 LLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQV 461
Query: 375 KKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVEN 434
KK+ S I V H F++G+ SHP+ ++I+ + + L M+ GYVP T V D+E
Sbjct: 462 KKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEE 521
Query: 435 DEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRD 494
EK + HSE+LA+ FGL+NTP T + I KNL+IC+DCH A K IS I REI VRD
Sbjct: 522 GEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRD 581
Query: 495 VNRYHHFKDGICSCGDYW 512
NR+H F D CSC DYW
Sbjct: 582 RNRFHCFNDNSCSCRDYW 599
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 55/101 (54%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + ++ L+ +Y C CL A ++F+ + +R + W+ +I A +G E A+ L+
Sbjct: 257 GFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLF 316
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN 102
+ ++G+ P+ TF L ACS + I EGRR + R+
Sbjct: 317 SDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRD 357
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/541 (40%), Positives = 322/541 (59%), Gaps = 44/541 (8%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ +Y L A +F + R+L WN +I G A++++ + G+ PD
Sbjct: 210 LIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPD 269
Query: 73 NFTFPFALKACSALSAIEEGRR---IHEDVIRNKWETD-VFVGAALIDMYAKCSCVVNAR 128
T + SA++ +GR +H V+R W+ D + G A++DMYAK S + A+
Sbjct: 270 VLTL---VSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQ 326
Query: 129 QVFDKILERDPS----------------------------------EATLVTVISASADI 154
++FD + +D + T V+V+ A + +
Sbjct: 327 RMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHL 386
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
AL QG +H S + ++V V T L+D+YAKCG + A LFE++ + WNA+I
Sbjct: 387 GALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAII 446
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+G +HGH +AL LF +M+ E ++PDH+TFV +L+ACS GL D+GR FF+ M Y I
Sbjct: 447 SGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDI 506
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P +HY CM D+LG +G+LDEA + I M +KPD VWGALL +C++HG+V++ ++A +
Sbjct: 507 VPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQ 566
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
L EL+P + G YV++SN+YA+ W+GV ++R L+ + ++K+ S IEVK + F
Sbjct: 567 NLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFY 626
Query: 394 SGDAS--HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIA 451
SG+ + HP +EI A+L+ L +++ GYV V DVE+DEK +++ HSERLAIA
Sbjct: 627 SGNQTEPHPQHEEIQAELRSLLAKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIA 686
Query: 452 FGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
FG+INTP T L I KNL++C DCH A K+IS+ITEREI VRD NR+HHFKDG CSCGD+
Sbjct: 687 FGIINTPSRTPLHIYKNLRVCGDCHNATKYISQITEREIIVRDSNRFHHFKDGHCSCGDF 746
Query: 512 W 512
W
Sbjct: 747 W 747
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 161/350 (46%), Gaps = 40/350 (11%)
Query: 12 KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
LVH Y + A+++FD + +R++ WN ++ N A+ L+ R++ G+
Sbjct: 108 SLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAG 167
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
D T L C L +H +++ + ++FV ALID+Y K + A+ VF
Sbjct: 168 DTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVF 227
Query: 132 DKILERD---------------------------------PSEATLVTVISASADIAALP 158
+ RD P TLV++ SA A
Sbjct: 228 HGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGR 287
Query: 159 QGRELHGFSWRHRFEL-NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
+ LH + R +++ ++ A+VDMYAK ++ A+ +F+ + + VSWN +ITGY
Sbjct: 288 SAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGY 347
Query: 218 AMHGHSTKALDLFEKMK--DEVQPDHITFVGVLSACSRGGLFDEG-RMFFESMVRDYHID 274
+G + +A++ + M+ + ++ TFV VL A S G +G RM S+ ++D
Sbjct: 348 MQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVD 407
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
V TC++DL G+L EA L +M + G W A+++ +HGH
Sbjct: 408 VYVG--TCLIDLYAKCGKLAEAMLLFEKMP-RRSTGPWNAIISGLGVHGH 454
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 143/321 (44%), Gaps = 24/321 (7%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE- 66
+ +V +Y+ + A ++FD +P ++ WN LI Y NG A+E Y + +
Sbjct: 307 IAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKH 366
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
GL TF L A S L A+++G R+H I+ DV+VG LID+YAKC +
Sbjct: 367 EGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAE 426
Query: 127 ARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
A +F+K+ R S +IS + G E R + E V +
Sbjct: 427 AMLLFEKMPRR--STGPWNAIISG---LGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLL 481
Query: 187 AKC---GLVKVARNLFEQLREKRVV-----SWNAMITGYAMHGHSTKALDLFEKMKDEVQ 238
A C GLV R+ F+ ++ + + M G +A + + M ++
Sbjct: 482 AACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMP--IK 539
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP-SVQHYTCMVDLLGHSGR---LD 294
PD + +L AC G + G++ +++ + +DP +V +Y M ++ G+ +D
Sbjct: 540 PDSAVWGALLGACRIHGNVEMGKVASQNL---FELDPENVGYYVLMSNMYAKVGKWDGVD 596
Query: 295 EACDLIMQMRVKPDPGVWGAL 315
E L+ + ++ PG W ++
Sbjct: 597 EVRSLVRRQNLQKTPG-WSSI 616
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 168/383 (43%), Gaps = 57/383 (14%)
Query: 42 NVLIRAYAWNGPYEVAIELYYRLLEIG--LVPDNFTFPFALKACSALSAIEEGRRIHEDV 99
N LI A++ +A L +L PD FTFP ++A + ++ + +H
Sbjct: 37 NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNASAAQ---LHACA 93
Query: 100 IR-NKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD-PSEATLVTVISASADIA-- 155
+R VF +L+ Y + + A +VFD++ ERD P+ +++ + +A A
Sbjct: 94 LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEA 153
Query: 156 ---------------------ALPQ----GRE-----LHGFSWRHRFELNVKVKTALVDM 185
LP G + +H ++ +H + + V AL+D+
Sbjct: 154 VGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDV 213
Query: 186 YAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITF 244
Y K G+++ A+ +F + + +V+WN++I+G G + AL +F+ M+ V PD +T
Sbjct: 214 YGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTL 273
Query: 245 VGVLSACSRGGLFDEGR----MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
V + SA ++GG +GR + M R + +D + +VD+ ++ A +
Sbjct: 274 VSLASAIAQGG---DGRSAKSLHCYVMRRGWDVDDIIAG-NAIVDMYAKLSNIEAAQRMF 329
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDA-----GNYVILSNIYAR 355
M V+ D W L+ +G LA A+E+ ++ H+ G +V + Y+
Sbjct: 330 DSMPVQ-DSVSWNTLITGYMQNG---LANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSH 385
Query: 356 AANWEGVAKLRKLMIDRGIKKSI 378
+ ++ L I G+ +
Sbjct: 386 LGALQQGMRMHALSIKIGLNVDV 408
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 14/221 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + T L+ LY+ C L A LF+++P+R+ WN +I +G A+ L
Sbjct: 402 IGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTL 461
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMY 118
+ R+ + G+ PD+ TF L ACS +++GR DV++ ++ A + DM
Sbjct: 462 FSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFF-DVMQVTYDIVPIAKHYACMADML 520
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL---N 175
+ + A F + + P A ++ A + G+ + ++ FEL N
Sbjct: 521 GRAGQLDEAFN-FIQNMPIKPDSAVWGALLGACRIHGNVEMGK----VASQNLFELDPEN 575
Query: 176 VKVKTALVDMYAKCGL---VKVARNLFEQLREKRVVSWNAM 213
V + +MYAK G V R+L + ++ W+++
Sbjct: 576 VGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSI 616
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/519 (41%), Positives = 305/519 (58%), Gaps = 46/519 (8%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G F +AT L+ LY C +++A ++FD + R++ WN L+ Y +G + A+ +
Sbjct: 163 IGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAI 222
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+ +V W T +I Y++
Sbjct: 223 FERMPWRNIV--------------------------------SWTT-------MISGYSQ 243
Query: 121 CSCVVNARQVFDKILERD----PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
A +FD++++ D P+ T+++V+ A A ++ L +GR++H + R N
Sbjct: 244 SGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNA 303
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLR--EKRVVSWNAMITGYAMHGHSTKALDLFEKM- 233
V AL MYAKCG + ARN F++L EK +++WN MIT YA +GH +A+ F +M
Sbjct: 304 SVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMI 363
Query: 234 KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
+ +QPD ITF G+LS CS GL D G +F M Y I+P V+HY C+ DLLG +GRL
Sbjct: 364 QAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRL 423
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIY 353
EA L+ +M + P +WG+LL +C+ H ++++AE A KL LEP + GNYV+LSN+Y
Sbjct: 424 AEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMY 483
Query: 354 ARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLE 413
A A W+ V KLR ++ +G KKS CSWIE+ KAH FL GD SHP EIY L+ L
Sbjct: 484 AEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALP 543
Query: 414 GRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICD 473
+MK AGY P T V HD+ +EK + HSE+LA+AFG++NTP T L +TKNL+IC
Sbjct: 544 EKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICG 603
Query: 474 DCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
DCH A+ FIS+I RE+ VRD+NR+HHFK G CSCGDYW
Sbjct: 604 DCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 642
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 157/350 (44%), Gaps = 55/350 (15%)
Query: 4 GFHPVLA-TKLVHLYSACDCLHNAHQLFDRIPQRNL----FLWNVLIRAYAWNGPYEVAI 58
G P+L+ + + + L HQ+ + R L + + ++ YA +G + ++
Sbjct: 66 GPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSV 125
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
++ + D FTFPF LK+ L ++ G+ +H ++R + D++V +LI +Y
Sbjct: 126 SVFNG------IGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILY 179
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
KC + +A +VFD + RD S SW
Sbjct: 180 GKCGEINDAGKVFDNMTIRDVS--------------------------SWN--------- 204
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-- 236
AL+ Y K G + A +FE++ + +VSW MI+GY+ G + +AL LF++M E
Sbjct: 205 --ALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDS 262
Query: 237 -VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
V+P+ +T + VL AC++ + GR E R ++ + + + G L +
Sbjct: 263 GVRPNWVTIMSVLPACAQLSTLERGRQIHELACR-MGLNSNASVLIALTAMYAKCGSLVD 321
Query: 296 ACDLIMQM-RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHD 342
A + ++ R + + W ++ + +GH A ++I+ ++P D
Sbjct: 322 ARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDD 371
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/549 (40%), Positives = 321/549 (58%), Gaps = 46/549 (8%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDR------IPQRNLFLWNVLIRAYAWNGPYEVAIE 59
+P L KL+ L+S C + A ++F+ +P+ +W + Y+ NG + A+
Sbjct: 108 NPTLKGKLITLFSVCRRVDEARRVFEDGGEDVDLPES---VWVAMGIGYSRNGYPKEALL 164
Query: 60 LYYRLL-EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
LYY ++ + G + NF F ALKACS L ++ GR +H V++ + D V AL+ +Y
Sbjct: 165 LYYEMVCQFGQL-GNFAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLY 223
Query: 119 AKCSCVVNARQVFDKILERDP---------------------------------SEATLV 145
++ C A +VFD + R+ S TL
Sbjct: 224 SEDGCFDEALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLT 283
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
T++ A + AL G+E+H + + + V +LVDMYAKCG + R +F ++ K
Sbjct: 284 TILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGK 343
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
+ SWN +ITGYA++G T+A++ F++M PD ITF+ +LS CS GL D+G F
Sbjct: 344 DLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLF 403
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
E M DY I P+V+HY C+VD+LG +GR+ EA +++ M KP +WG+LLNSC+LHG+
Sbjct: 404 EMMKMDYGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGN 463
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
V LAE ++L ELEP++AGNYV+LSNIYA A WE V +R+ M RG+ K CSW++
Sbjct: 464 VPLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQ 523
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKL-KWLEGRMKEAGYVPGTESVFHDVENDEKANMICC 443
+K+K H F++G ++ Y K+ K L M+E GYVP T V HDV + +A +C
Sbjct: 524 IKSKIHTFVAGGSNEFRNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCG 583
Query: 444 HSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKD 503
HSERLA F LINT G + ITKNL++C DCH +K +SK+T R I +RD NR+HHFKD
Sbjct: 584 HSERLATMFALINTASGMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKD 643
Query: 504 GICSCGDYW 512
G+CSC DYW
Sbjct: 644 GVCSCKDYW 652
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 5/131 (3%)
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS---WNAMITGYAMHGHSTKA 226
H N +K L+ +++ C V AR +FE E + W AM GY+ +G+ +A
Sbjct: 103 HNLLNNPTLKGKLITLFSVCRRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEA 162
Query: 227 LDLFEKMKDEV-QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
L L+ +M + Q + F L ACS G GR +++ DP ++
Sbjct: 163 LLLYYEMVCQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATE-DPDQVVNNALLR 221
Query: 286 LLGHSGRLDEA 296
L G DEA
Sbjct: 222 LYSEDGCFDEA 232
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/538 (38%), Positives = 324/538 (60%), Gaps = 38/538 (7%)
Query: 13 LVHLYSACDC---LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPY-EVAIELYYRLLEIG 68
L+++Y+ C + A ++FD+I N+F W +I Y G Y E A++L+ ++
Sbjct: 312 LINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTH 371
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
++P++FTF LKAC+ L+A+ G ++ ++ + + V +LI MYA+ + +AR
Sbjct: 372 VIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDAR 431
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+ FD + E++ S T +++S +A I
Sbjct: 432 KAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIG 491
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+ +G ++H + +LN V AL+ MY++CG ++ A +FE + ++ V+SW ++IT
Sbjct: 492 TIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIIT 551
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+A HG +T+AL+LF KM +E V+P+ +T++ VLSACS GL +EG F+SM ++ +
Sbjct: 552 GFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVI 611
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY CMVD+LG SG L EA I M K D VW L +C++HG+++L + A +
Sbjct: 612 PRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKM 671
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
+IE EPHD Y++LSN+YA + W+ V+ +RK M ++ + K CSW+EV+NK H F
Sbjct: 672 IIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYV 731
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD SHP EIY +L+ L ++K+ GYVP + V HDVE ++K ++ HSE++A+AFGL
Sbjct: 732 GDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGL 791
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I+T + + KNL+IC DCH AIK+IS T REI VRD NR+HH KDG CSC +YW
Sbjct: 792 ISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 152/334 (45%), Gaps = 50/334 (14%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRI-PQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
V L+ LYS C A +F + R+L W+ ++ +A N A+ + ++E
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAKCSC-V 124
G P+ + F A +ACS + G I V++ + ++DV VG LIDM+ K +
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDL 221
Query: 125 VNARQVFDKILER---------------------------------DPSEATLVTVISAS 151
V+A +VF+K+ ER +P TL VISA
Sbjct: 222 VSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISAC 281
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC---GLVKVARNLFEQLREKRVV 208
A++ L G++LH + RH L+ V L++MYAKC G + AR +F+Q+ + V
Sbjct: 282 ANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVF 341
Query: 209 SWNAMITGYAMH-GHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
SW AMITGY G+ +ALDLF M V P+H TF L AC+ G F
Sbjct: 342 SWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTH 401
Query: 267 MVRDYHIDPSVQHYTC----MVDLLGHSGRLDEA 296
V+ C ++ + SGR+D+A
Sbjct: 402 AVK-----LGFSSVNCVANSLISMYARSGRIDDA 430
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 179/393 (45%), Gaps = 44/393 (11%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L +A ++F+++P+RN W ++I G AI+L+ ++ G PD FT + A
Sbjct: 221 LVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISA 280
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS---CVVNARQVFDKILERD- 138
C+ + + G+++H IR+ D VG LI+MYAKCS + AR++FD+IL+ +
Sbjct: 281 CANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNV 340
Query: 139 ---------------------------------PSEATLVTVISASADIAALPQGRELHG 165
P+ T + + A A++AAL G ++
Sbjct: 341 FSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFT 400
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
+ + F V +L+ MYA+ G + AR F+ L EK ++S+N +I YA + +S +
Sbjct: 401 HAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEE 460
Query: 226 ALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD-YHIDPSVQHYTCM 283
AL+LF +++D+ + TF +LS + G +G +++ ++ SV + +
Sbjct: 461 ALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCN--AL 518
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPH 341
+ + G ++ A + M + + W +++ HG A K++E + P+
Sbjct: 519 ISMYSRCGNIESAFQVFEDMEDR-NVISWTSIITGFAKHGFATQALELFHKMLEEGVRPN 577
Query: 342 DAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
+LS EG + + + G+
Sbjct: 578 LVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGV 610
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 152/400 (38%), Gaps = 77/400 (19%)
Query: 51 NGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFV 110
NG AI ++ G PD T+ LK C + + G +HE + ++ + D
Sbjct: 44 NGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVT 103
Query: 111 GAALIDMYAKC--------------------------SCVVNARQVFDKILE-------- 136
+LI +Y+KC SC N F +L
Sbjct: 104 LNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG 163
Query: 137 RDPSEATLVTVISASADIAALPQGRELHGFSWRHRF-ELNVKVKTALVDMYAKC-GLVKV 194
P+E A + + G + GF + + + +V V L+DM+ K G +
Sbjct: 164 YYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVS 223
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSR 253
A +FE++ E+ V+W MIT G++ +A+DLF E + +PD T GV+SAC+
Sbjct: 224 AFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACAN 283
Query: 254 GGLFDEGRMFFESMVR---------------------------------DYHIDPSVQHY 280
L G+ +R D +D +V +
Sbjct: 284 MELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSW 343
Query: 281 TCMVDLLGHSGRLD-EACDLIMQM---RVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
T M+ G D EA DL M V P+ + + L +C +++ E +
Sbjct: 344 TAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAV 403
Query: 337 ELEPHDAGNYVI--LSNIYARAANWEGVAKLRKLMIDRGI 374
+L + N V L ++YAR+ + K ++ ++ +
Sbjct: 404 KL-GFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNL 442
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/545 (36%), Positives = 325/545 (59%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ + L+++Y+ C L + ++F + ++ WN +I Y NG ++ A++L+
Sbjct: 346 GYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF 405
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++++ + PD+ T+ L + L + G+ +H D+ + + +++ V L+DMYAKC
Sbjct: 406 -KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKC 464
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ ++ +VF+ + RD P AT+++++
Sbjct: 465 GEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSIL 524
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+ +AA QG+E+HG ++ E +V V L++MY+KCG ++ + +F+ ++ K VV
Sbjct: 525 PVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVV 584
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W A+I+ M+G KA+ F +M+ + PDH+ FV ++ ACS GL +EG +F M
Sbjct: 585 TWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRM 644
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+DY I+P ++HY C+VDLL S LD+A D I+ M +KPD +WGALL++C++ G ++
Sbjct: 645 KKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEI 704
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE E++IEL P D G YV++SNIYA W+ V +RK + RG+KK CSW+E++N
Sbjct: 705 AERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQN 764
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K + F +G +E+ L L G M + GY+ + V HD++ DEK +++C HSER
Sbjct: 765 KVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSER 824
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGL+NT GT L + KNL++C+DCH K+ISKI +RE+ VRD NR+H FKDG CS
Sbjct: 825 LAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACS 884
Query: 508 CGDYW 512
CGDYW
Sbjct: 885 CGDYW 889
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 174/351 (49%), Gaps = 34/351 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MGFG + L+ +Y + L A ++F+ +P R++ WN LI Y NG + A+E+
Sbjct: 144 MGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEI 203
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
YYR +G+VPD++T L+AC L ++EEG IH + + + DV V L+ MY K
Sbjct: 204 YYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCK 263
Query: 121 CSCVVNARQVFDKILERD--------------------------------PSEATLVTVI 148
+ +++ R++FDK++ RD P T+ +++
Sbjct: 264 FNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSIL 323
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A + L G+ +H + +E + L++MYAKCG + ++ +F ++ K V
Sbjct: 324 QACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSV 383
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
SWN+MI Y +G +A+ LF+ MK +V+PD +T+V +LS ++ G G+ +
Sbjct: 384 SWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLA 443
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC 319
+ + ++ +VD+ G + ++ + M+ + D W ++ SC
Sbjct: 444 K-MGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR-DIITWNTIIASC 492
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 170/351 (48%), Gaps = 39/351 (11%)
Query: 34 PQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
P N++LWN +IRA NG + A+ LY I L PD +TFP + AC+ L E +
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 94 RIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD--------------- 138
IH+ V+ + +D+++G ALIDMY + + + AR+VF+++ RD
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195
Query: 139 ------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
P T+ +V+ A + ++ +G +HG + + +V V
Sbjct: 196 YWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNN 255
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPD 240
L+ MY K + R +F+++ + VSWN MI GY+ G +++ LF +M ++ +PD
Sbjct: 256 GLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPD 315
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
+T +L AC G + G+ + M+ Y D + + ++++ G L + ++
Sbjct: 316 LLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASN--ILINMYAKCGNLLASQEV 373
Query: 300 IMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPH-DAGNYVIL 349
M+ K D W +++N +G A + L K+++ + D+ YV+L
Sbjct: 374 FSGMKCK-DSVSWNSMINVYIQNGSFDEA-MKLFKMMKTDVKPDSVTYVML 422
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/539 (40%), Positives = 317/539 (58%), Gaps = 37/539 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y++ L A +LFD IP R++ WN +I YA +G E A+ + + +
Sbjct: 198 TALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVT 257
Query: 71 PDNFTFPFALKACS-ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
P+ T L AC+ + S+++ G + + +++ + LIDMY KC + A
Sbjct: 258 PNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASN 317
Query: 130 VFDKILER---------------------------------DPSEATLVTVISASADIAA 156
+F+KI ++ DP++ T ++++ A A++ A
Sbjct: 318 LFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGA 377
Query: 157 LPQGRELHGFSWRHRFEL--NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L G+ +H + ++ + V + T+L+DMYAKCG + VA+ +F+ + K + +WNAMI
Sbjct: 378 LDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMI 437
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+G+AMHGH+ AL LF +M E PD ITFVGVL+AC GL GR +F SM++DY +
Sbjct: 438 SGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKV 497
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P + HY CM+DL G +G DEA L+ M +KPD +W +LL +C++H ++LAE +
Sbjct: 498 SPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAK 557
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
L ELEP + YV+LSNIYA A WE VAK+R + D +KK CS IEV + H FL
Sbjct: 558 HLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFL 617
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD HP +EIY L ++ R+++AG+VP T V +D++ + K ++ HSE+LAIAFG
Sbjct: 618 VGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFG 677
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LI+T GT + I KNL++C +CH A K ISKI REI RD NR+HHFKDG CSC DYW
Sbjct: 678 LISTKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 192/439 (43%), Gaps = 91/439 (20%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L A LF I N +WN +IR + + +A+E Y ++ G P+ +TFP K+
Sbjct: 78 LSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKS 137
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEA 142
C+ + EG+++H V++ E + FV +LI+MYA+ +VNAR VFDK RD
Sbjct: 138 CTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSF 197
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T AL+ YA G + AR LF+++
Sbjct: 198 T-------------------------------------ALITGYASKGFLDEARELFDEI 220
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGR 261
+ VVSWNAMI+GYA G +A+ FE+M+ +V P+ T + VLSAC++ G +
Sbjct: 221 PVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLG 280
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL---------------------- 299
+ S + D + +++ ++D+ G L+EA +L
Sbjct: 281 NWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHM 340
Query: 300 ------------IMQMRVKPDPGVWGALLNSCKLHGHVKLAELA---LEKLIELEPHDAG 344
+MQ + P+ + ++L +C G + L + ++K ++ +
Sbjct: 341 SCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVA 400
Query: 345 NYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDE 404
+ L ++YA+ G + K + D KS+A +W +A +SG A H + D
Sbjct: 401 LWTSLIDMYAKC----GDLAVAKRIFDCMNTKSLA-TW-------NAMISGFAMHGHTDT 448
Query: 405 IYAKLKWLEGRMKEAGYVP 423
L RM G+VP
Sbjct: 449 ALG----LFSRMTSEGFVP 463
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/557 (39%), Positives = 324/557 (58%), Gaps = 46/557 (8%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+G +A+ L+ +YS C L++A +LFD IP+RN+ W +I Y N A+ L+
Sbjct: 116 GYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLF 175
Query: 62 YRLLEIG-----------LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFV 110
L + + D+ + AC+ + +H ++ +E + V
Sbjct: 176 KEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAV 235
Query: 111 GAALIDMYAKCSCVVNARQVFDKILERDP------------------------------- 139
G L+D YAKC + +R+VFD + E D
Sbjct: 236 GNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGE 295
Query: 140 ---SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
+ TL V+ A A AL G+ +H + E N+ V T++VDMY KCG V++AR
Sbjct: 296 VRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMAR 355
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGG 255
F++L+ K V SW M+ GY MHGH +A+ +F E ++ ++P++ITFV VL+ACS G
Sbjct: 356 KAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAG 415
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
L EG +F M ++ ++P ++HY+CMVDLLG +G L EA LI +M+VKPD VWG+L
Sbjct: 416 LLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSL 475
Query: 316 LNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIK 375
L +C++H +V+L E++ KL +L+P + G YV+LSNIYA A W+ V ++R LM + G+
Sbjct: 476 LGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLL 535
Query: 376 KSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVEND 435
K+ S +E K + H FL GD HP ++IY L L +++E GY+P SV +DV+ +
Sbjct: 536 KTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSVLYDVDVE 595
Query: 436 EKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDV 495
EK ++ HSE+LA+AFG++N+ G+ + I KNL+IC DCH AIK ISKI REI +RD
Sbjct: 596 EKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLISKIVNREIVIRDS 655
Query: 496 NRYHHFKDGICSCGDYW 512
R+HHFKDG+CSCGDYW
Sbjct: 656 KRFHHFKDGLCSCGDYW 672
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 183/382 (47%), Gaps = 61/382 (15%)
Query: 25 NAHQLFDR-IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKAC 83
N +F + + + +++ WN +I +A +G A+ + + ++ L P+ TFP +K+C
Sbjct: 37 NLRSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSC 96
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEAT 143
S+L + G++IH+ + +D+FV +ALIDMY+KC + +AR++FD+I ER+ T
Sbjct: 97 SSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWT 156
Query: 144 --------------------------------------------LVTVISASADIAALPQ 159
L VISA A +
Sbjct: 157 SMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSV 216
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
+HG + + FE + V L+D YAKCG + V+R +F+ + E V SWN++I YA
Sbjct: 217 TECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQ 276
Query: 220 HGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
+G S +A LF M + EV+ + +T VL AC+ G G+ + +V+ ++ ++
Sbjct: 277 NGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVK-MELEDNL 335
Query: 278 QHYTCMVDLLGHSGRLD---EACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
T +VD+ GR++ +A D + + VK W ++ +HGH K A +
Sbjct: 336 VVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKS----WTVMVAGYGMHGHGKEAMKVFYE 391
Query: 335 LIE--LEPHDAGNYVILSNIYA 354
+I ++P NY+ ++ A
Sbjct: 392 MIRCGIKP----NYITFVSVLA 409
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/546 (39%), Positives = 319/546 (58%), Gaps = 36/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + ++ L+ +Y+ C C+ + FD + ++L W YA N Y A+EL
Sbjct: 291 GFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELL 350
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+L G+ D L AC L+ + + + IH IR +D + +ID+Y +C
Sbjct: 351 RQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGL-SDPVLQNTIIDVYGEC 409
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ A ++F+ I +D P TLV+++
Sbjct: 410 GIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSIL 469
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA ++ L +G+E+HGF R F L + LVDMYA+CG V+ A +F + + ++
Sbjct: 470 SAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLI 529
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
W AMI+ Y MHG+ A++LF +MKDE + PDHITF+ +L ACS GL +EG+ F E M
Sbjct: 530 LWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIM 589
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+Y ++P +HYTC+VDLLG L+EA ++ M+ +P P VW ALL +C++H + ++
Sbjct: 590 KCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEI 649
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E+A EKL+EL+ + GNYV++SN++A W+ V ++R M G+ K+ CSWIEV N
Sbjct: 650 GEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGN 709
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMK-EAGYVPGTESVFHDVENDEKANMICCHSE 446
K HAFLS D HP CD+IY KL + ++K E GYV T+ V H+V +EK M+ HSE
Sbjct: 710 KIHAFLSRDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSE 769
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
RLAIA+GL+ T +GT + +TKNL++C DCH +S+ ERE+ VRD +R+HHFKDG+C
Sbjct: 770 RLAIAYGLLATAEGTPIRVTKNLRVCGDCHSFCTLVSRFFERELIVRDASRFHHFKDGMC 829
Query: 507 SCGDYW 512
SCGD+W
Sbjct: 830 SCGDFW 835
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 191/400 (47%), Gaps = 50/400 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRN-LFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+ LV LY+ C+ ++ A +LFDR+ RN + WN +I AY+ NG A+ L+ +L+
Sbjct: 95 VVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKA 154
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+V + +TF AL+AC S I+ G +IH ++++ DV+V AL+ MY + + A
Sbjct: 155 GVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEA 214
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
+F + +D P + +++++I AS +
Sbjct: 215 AVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRL 274
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L G+E+H ++ ++ F+ N+ V L+DMYAKC + F+ + K ++SW
Sbjct: 275 GYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAA 334
Query: 215 TGYAMHGHSTKALDLFEKMKDEVQPDHITFVG-VLSACSRGGLFDEGRMFFESMVRDYHI 273
GYA + +AL+L +++ E T +G +L AC + + +R
Sbjct: 335 AGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS 394
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
DP +Q+ ++D+ G G +D A + + K D W +++ SC +H LA ALE
Sbjct: 395 DPVLQN--TIIDVYGECGIIDYAVRIFESIECK-DVVSWTSMI-SCYVHN--GLANKALE 448
Query: 334 -----KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKL 368
K LEP +YV L +I + + + K +++
Sbjct: 449 VFSSMKETGLEP----DYVTLVSILSAVCSLSTLKKGKEI 484
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 171/362 (47%), Gaps = 46/362 (12%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFT 75
+Y C + +A +FD++ +R++F WN ++ Y NG A+E+Y + +G+ D++T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL 135
FP LKAC + + G IH I+ ++ VFV +L+ +YAKC+ + AR++FD++
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 136 ERDP-----------------SEA-----------------TLVTVISASADIAALPQGR 161
R+ +EA T + A D + + G
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180
Query: 162 ELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHG 221
++H + L+V V ALV MY + G + A +F L K +V+WN+M+TG+ +G
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240
Query: 222 HSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHY 280
++AL+ F +++ +++PD ++ + ++ A R G G+ +++ D ++
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKN-GFDSNILVG 299
Query: 281 TCMVDL------LGHSGRLDEACDLIMQMR-VKPDPGVWGALLNSCKLHGHVKLAELALE 333
++D+ + + GR A DL+ + G N C L L +L +E
Sbjct: 300 NTLIDMYAKCCCMSYGGR---AFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQME 356
Query: 334 KL 335
+
Sbjct: 357 GM 358
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/551 (37%), Positives = 331/551 (60%), Gaps = 47/551 (8%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE-I 67
+ + LV +Y C + + ++FD + R + LWN +I Y+ N + A+ L+ + E
Sbjct: 253 VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESA 312
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
GL+ ++ T + AC A IH V++ + D FV L+DMY++ + A
Sbjct: 313 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIA 372
Query: 128 RQVFDKILERD--------------------------------------------PSEAT 143
++F K+ +RD P+ T
Sbjct: 373 MRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSIT 432
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
L+T++ + A ++AL +G+E+H ++ ++ +V V +ALVDMYAKCG ++++R +F+Q+
Sbjct: 433 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 492
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRM 262
+K V++WN +I Y MHG+ +A+DL M + V+P+ +TF+ V +ACS G+ DEG
Sbjct: 493 QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 552
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM-RVKPDPGVWGALLNSCKL 321
F M DY ++PS HY C+VDLLG +GR+ EA L+ M R G W +LL + ++
Sbjct: 553 IFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRI 612
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
H ++++ E+A + LI+LEP+ A +YV+L+NIY+ A W+ ++R+ M ++G++K CS
Sbjct: 613 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 672
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMI 441
WIE ++ H F++GD+SHP +++ L+ L RM++ GYVP T V H+VE DEK ++
Sbjct: 673 WIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILL 732
Query: 442 CCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF 501
C HSE+LAIAFG++NT GT + + KNL++C+DCH+A KFISKI +REI +RDV R+H F
Sbjct: 733 CGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRF 792
Query: 502 KDGICSCGDYW 512
K+G CSCGDYW
Sbjct: 793 KNGTCSCGDYW 803
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 175/379 (46%), Gaps = 45/379 (11%)
Query: 2 GFGFHPV-LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
G+G V +A LV+LY C +++FDRI +RN WN LI + +E+A+E
Sbjct: 40 GYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEA 99
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEE---GRRIHEDVIRNKWETDVFVGAALIDM 117
+ +L+ + P +FT + ACS L E G+++H +R K E + F+ L+ M
Sbjct: 100 FRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAM 158
Query: 118 YAKCSCVVNARQVFDKILERD---------------------------------PSEATL 144
Y K + +++ + RD P E T+
Sbjct: 159 YGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTI 218
Query: 145 VTVISASADIAALPQGRELHGFSWRH-RFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
+V+ A + + L G+ELH ++ ++ + N V +ALVDMY C V R +F+ +
Sbjct: 219 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF 278
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGR 261
++++ WNAMI GY+ + H +AL LF M++ + + T GV+ AC R G F
Sbjct: 279 DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKE 338
Query: 262 MFFESMV-RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
+V R D VQ+ ++D+ G++D A + +M + D W ++
Sbjct: 339 AIHGFVVKRGLDRDRFVQN--TLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMITGYV 395
Query: 321 LHGHVKLAELALEKLIELE 339
H + A L L K+ LE
Sbjct: 396 FSEHHEDALLLLHKMQNLE 414
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 122/261 (46%), Gaps = 39/261 (14%)
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETD-VFVGAALIDMYAKCS 122
++ +G+ PDN+ FP LKA + L +E G++IH V + + D V V L+++Y KC
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 123 CVVNARQVFDKILER---------------------------------DPSEATLVTVIS 149
+VFD+I ER +PS TLV+V++
Sbjct: 61 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120
Query: 150 ASADIA---ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
A +++ L G+++H + R + ELN + LV MY K G + ++ L +
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRD 179
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+V+WN +++ + +AL+ +M E V+PD T VL ACS + G+
Sbjct: 180 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 239
Query: 266 SMVRDYHIDPSVQHYTCMVDL 286
+++ +D + + +VD+
Sbjct: 240 YALKNGSLDENSFVGSALVDM 260
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/549 (40%), Positives = 323/549 (58%), Gaps = 44/549 (8%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRI-PQRNLFLWNVLIRAYAWNGPYEVAIEL 60
G+ F + T L+ YS C + A +LF N+ W +I + N + A++L
Sbjct: 336 GYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDL 395
Query: 61 YYRLLEIGLVPDNFTFPFAL--KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
+ ++ G+ P++FT+ L K S LS ++H +I+ +E V AL+D Y
Sbjct: 396 FCQMSREGVRPNHFTYSTVLAGKPSSLLS------QLHAQIIKAYYEKVPSVATALLDAY 449
Query: 119 AKCSCVVNARQVFDKILERD---------------------------------PSEATLV 145
K VV + +VF I +D P+E T
Sbjct: 450 VKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFS 509
Query: 146 TVISA-SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE 204
+VI+A S+ A + G+++H + + + V +AL+ MY+K G ++ A +F + E
Sbjct: 510 SVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEE 569
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMF 263
+ +VSWN+MITGY HG + KAL++F+ M+++ P D +TF+GVL+AC+ GL +EG +
Sbjct: 570 RDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKY 629
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
F M++DYHID +HY+CMVDL +G D+A D+I M P +W LL +C++H
Sbjct: 630 FNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHR 689
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
+++L +LA EKL+ L+P+DA YV+LSNI+A A NWE A +RKLM +R +KK CSWI
Sbjct: 690 NLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWI 749
Query: 384 EVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICC 443
E+KN+ +FL+GD SHP D +YAKL+ L ++K+ GY P T VFHDVE + K ++
Sbjct: 750 EIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQ 809
Query: 444 HSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKD 503
HSERLAIA+GLI P G + I KNL+IC DCH I+ IS I ER + VRD NR+HHFK
Sbjct: 810 HSERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKG 869
Query: 504 GICSCGDYW 512
G+CSCG YW
Sbjct: 870 GVCSCGGYW 878
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 181/420 (43%), Gaps = 49/420 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + T LV +Y + + +FD + +N+ W L+ YA NG + I L
Sbjct: 134 GFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLI 193
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ G+ P+ FTF L A + S IE G ++H +++N +E FV ALI MY K
Sbjct: 194 NQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKS 253
Query: 122 SCVVNARQVFDKILERDP---------------------------------SEATLVTVI 148
V +A VFD ++ RD S T +
Sbjct: 254 EMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTAL 313
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK-RV 207
+ L ++LH ++ +E ++TAL+ Y+KC V A LF V
Sbjct: 314 KLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNV 373
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V+W AMI G+ + ++ KA+DLF +M E V+P+H T+ VL+ L ++ +
Sbjct: 374 VTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL---SQLHAQI 430
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+ Y PSV T ++D +G + E+ + + K D W A+L +
Sbjct: 431 IKAYYEKVPSVA--TALLDAYVKTGNVVESARVFYSIPAK-DIVAWSAMLTGL---AQTR 484
Query: 327 LAELALEKLIEL-----EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
+E A+E I+L +P++ +++ + AA E ++ + G ++ S
Sbjct: 485 DSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVS 544
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 117/262 (44%), Gaps = 34/262 (12%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
AHQLFD P +++ +N L+ ++ N A+ L+ L GL D T ALK C
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER-------- 137
L GR++H +++ + DV VG +L+DMY K + R +FD++ +
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 138 -------------------------DPSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
+P+ T TV+ A AD + + G ++H ++ F
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
E V AL+ MY K +V A +F+ + + V+WN MI GYA G + +F +
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296
Query: 233 MK-DEVQPDHITFVGVLSACSR 253
M+ V+ F L CS+
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQ 318
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
GR++H S + F +V V T+LVDMY K + R +F+++ K VVSW ++++GYA
Sbjct: 123 GRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYAR 182
Query: 220 HGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
+G + + + L +M+ E V P+ TF VL A + + + G +V++
Sbjct: 183 NGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/583 (36%), Positives = 329/583 (56%), Gaps = 71/583 (12%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MGFG + L+ +Y + L A ++F+ +P R++ WN LI Y NG + A+E+
Sbjct: 144 MGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEI 203
Query: 61 YYRLLEIGL------VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAAL 114
YY+ +++ + PD T L+AC L +E G+ +H+ +I + +E D L
Sbjct: 204 YYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNIL 263
Query: 115 IDMYAKCSCVVNARQ-------------------------------VFDKILERD----- 138
I+MYAKC ++ +++ VF+ + RD
Sbjct: 264 INMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWN 323
Query: 139 ----------------------------PSEATLVTVISASADIAALPQGRELHGFSWRH 170
P AT+++++ + +AA QG+E+HG ++
Sbjct: 324 TIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKL 383
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
E +V V L++MY+KCG ++ + +F+ ++ K VV+W A+I+ M+G KA+ F
Sbjct: 384 GLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAF 443
Query: 231 EKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGH 289
+M+ + PDH+ FV ++ ACS GL +EG +F M +DY I+P ++HY C+VDLL
Sbjct: 444 GEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSR 503
Query: 290 SGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVIL 349
S LD+A D I+ M +KPD +WGALL++C++ G ++AE E++IEL P D G YV++
Sbjct: 504 SALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLV 563
Query: 350 SNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKL 409
SNIYA W+ V +RK + RG+KK CSW+E++NK + F +G +E+ L
Sbjct: 564 SNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLL 623
Query: 410 KWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNL 469
L G M + GY+ + V HD++ DEK +++C HSERLAIAFGL+NT GT L + KNL
Sbjct: 624 GMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNL 683
Query: 470 KICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++C+DCH K+ISKI +RE+ VRD NR+H FKDG CSCGDYW
Sbjct: 684 RVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 726
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 160/373 (42%), Gaps = 73/373 (19%)
Query: 34 PQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
P N++LWN +IRA NG + A+ LY I L PD +TFP + AC+ L E +
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 94 RIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD--------------- 138
IH+ V+ + +D+++G ALIDMY + + + AR+VF+++ RD
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195
Query: 139 ------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFEL 174
P T+ +++ A + L G+ +H + +E
Sbjct: 196 YWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYEC 255
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
+ L++MYAKCG + ++ +F ++ K VSWN+MI Y +G +L +FE MK
Sbjct: 256 DTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMK 315
Query: 235 --------------------------------DEVQPDHITFVGVLSACSRGGLFDEGRM 262
+ V PD T + +L CS +G+
Sbjct: 316 ARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKE 375
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
+ + ++ V ++++ G L + + M+ K D W AL+++C ++
Sbjct: 376 IHGCIFK-LGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISACGMY 433
Query: 323 GHVKLAELALEKL 335
G K A A ++
Sbjct: 434 GEGKKAVRAFGEM 446
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 7/189 (3%)
Query: 140 SEATLVTVIS-ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
S TL + IS A A A Q +LH +V L+ YA + ++
Sbjct: 11 SRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSV 70
Query: 199 FEQLR-EKRVVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGL 256
F V WN++I +G ++AL L+ E + +QPD TF V++AC+ GL
Sbjct: 71 FRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACA--GL 128
Query: 257 FD-EGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
D E V D + ++D+ LD+A + +M ++ D W +L
Sbjct: 129 LDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR-DVVSWNSL 187
Query: 316 LNSCKLHGH 324
++ +G+
Sbjct: 188 ISGYNANGY 196
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/574 (40%), Positives = 319/574 (55%), Gaps = 71/574 (12%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
+PVL KL Y++ + ++ LF + +LFL+ I + NG + A LY +LL
Sbjct: 61 YPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLL 120
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
+ P+ FTF LK+CS S G+ IH V++ D +V L+D+YAK VV
Sbjct: 121 SSQINPNEFTFSSILKSCSTKS----GKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVV 176
Query: 126 NARQVF-------------------------------DKILERD---------------- 138
+A++VF D++ ERD
Sbjct: 177 SAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGF 236
Query: 139 ------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
P E T+V +SA + I AL GR +H F R LNVKV T
Sbjct: 237 PSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCT 296
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK--DEVQ 238
AL+DMY+KCG ++ A +F K +V+WNAMITGYAMHG+S AL LF++M+ +Q
Sbjct: 297 ALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQ 356
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
P ITF+G L AC+ GL +EG FESM ++Y I P ++HY C+V LLG +G+L A +
Sbjct: 357 PTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYE 416
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN 358
+I M ++ D +W ++L SCKLHG L + E LI ++G YV+LSNIYA +
Sbjct: 417 IIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALVGD 476
Query: 359 WEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKE 418
+EGVAK+R LM ++GI K S IE+ NK H F +GD H EIY L+ + R+K
Sbjct: 477 YEGVAKVRNLMKEKGIVKEPGISTIEIDNKVHEFRAGDREHLKSKEIYTMLRKMSERIKS 536
Query: 419 AGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIA 478
GYVP T +V HD+E EK + HSERLAIA+GLI+T G+ L I KNL++C DCH
Sbjct: 537 HGYVPNTNTVLHDLEETEKERSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTV 596
Query: 479 IKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
K ISKIT R+I +RD NR+HHF DG CSC D+W
Sbjct: 597 TKLISKITGRKIVMRDRNRFHHFSDGSCSCDDFW 630
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/551 (37%), Positives = 331/551 (60%), Gaps = 47/551 (8%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE-I 67
+ + LV +Y C + + ++FD + R + LWN +I Y+ N + A+ L+ + E
Sbjct: 340 VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESA 399
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
GL+ ++ T + AC A IH V++ + D FV L+DMY++ + A
Sbjct: 400 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIA 459
Query: 128 RQVFDKILERD--------------------------------------------PSEAT 143
++F K+ +RD P+ T
Sbjct: 460 MRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSIT 519
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
L+T++ + A ++AL +G+E+H ++ ++ +V V +ALVDMYAKCG ++++R +F+Q+
Sbjct: 520 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRM 262
+K V++WN +I Y MHG+ +A+DL M + V+P+ +TF+ V +ACS G+ DEG
Sbjct: 580 QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 639
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM-RVKPDPGVWGALLNSCKL 321
F M DY ++PS HY C+VDLLG +GR+ EA L+ M R G W +LL + ++
Sbjct: 640 IFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRI 699
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
H ++++ E+A + LI+LEP+ A +YV+L+NIY+ A W+ ++R+ M ++G++K CS
Sbjct: 700 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 759
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMI 441
WIE ++ H F++GD+SHP +++ L+ L RM++ GYVP T V H+VE DEK ++
Sbjct: 760 WIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILL 819
Query: 442 CCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF 501
C HSE+LAIAFG++NT GT + + KNL++C+DCH+A KFISKI +REI +RDV R+H F
Sbjct: 820 CGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRF 879
Query: 502 KDGICSCGDYW 512
K+G CSCGDYW
Sbjct: 880 KNGTCSCGDYW 890
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 175/379 (46%), Gaps = 45/379 (11%)
Query: 2 GFGFHPV-LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
G+G V +A LV+LY C +++FDRI +RN WN LI + +E+A+E
Sbjct: 127 GYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEA 186
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEE---GRRIHEDVIRNKWETDVFVGAALIDM 117
+ +L+ + P +FT + ACS L E G+++H +R K E + F+ L+ M
Sbjct: 187 FRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAM 245
Query: 118 YAKCSCVVNARQVFDKILERD---------------------------------PSEATL 144
Y K + +++ + RD P E T+
Sbjct: 246 YGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTI 305
Query: 145 VTVISASADIAALPQGRELHGFSWRH-RFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
+V+ A + + L G+ELH ++ ++ + N V +ALVDMY C V R +F+ +
Sbjct: 306 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF 365
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGR 261
++++ WNAMI GY+ + H +AL LF M++ + + T GV+ AC R G F
Sbjct: 366 DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKE 425
Query: 262 MFFESMV-RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
+V R D VQ+ ++D+ G++D A + +M + D W ++
Sbjct: 426 AIHGFVVKRGLDRDRFVQN--TLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMITGYV 482
Query: 321 LHGHVKLAELALEKLIELE 339
H + A L L K+ LE
Sbjct: 483 FSEHHEDALLLLHKMQNLE 501
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 150/333 (45%), Gaps = 50/333 (15%)
Query: 41 WNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVI 100
W L+R+ + A+ Y ++ +G+ PDN+ FP LKA + L +E G++IH V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 101 RNKWETD-VFVGAALIDMYAKCSCVVNARQVFDKILER---------------------- 137
+ + D V V L+++Y KC +VFD+I ER
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 138 -----------DPSEATLVTVISASADIA---ALPQGRELHGFSWRHRFELNVKVKTALV 183
+PS TLV+V++A +++ L G+++H + R + ELN + LV
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLV 243
Query: 184 DMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHI 242
MY K G + ++ L + +V+WN +++ + +AL+ +M E V+PD
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGH-----SGRLDEAC 297
T VL ACS + G+ +++ +D + + +VD+ + SGR
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGR--RVF 361
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
D + ++ G+W A++ + H K A L
Sbjct: 362 DGMFDRKI----GLWNAMIAGYSQNEHDKEALL 390
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/561 (38%), Positives = 322/561 (57%), Gaps = 57/561 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T+L+ LY+ CD L +AH +FD +P+RN+ W +I AY+ G A+ L++ ++I
Sbjct: 280 LRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKIS 339
Query: 69 LV---------------------PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETD 107
L P+ FTF L +C++ GR+IH +I+ +E
Sbjct: 340 LTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDH 399
Query: 108 VFVGAALIDMYAKCSCVVNARQVFDKILERD----------------------------- 138
VFVG++L+DMYAK + AR VF+ + ERD
Sbjct: 400 VFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQG 459
Query: 139 ----PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV 194
+ T V++A + +AAL G+++H R V ++ +L+DMY+KCG +
Sbjct: 460 EGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTY 519
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACS 252
+R +F+ + E+ V+SWNAM+ GY+ HG + L LF M++E V+PD +T + VLS CS
Sbjct: 520 SRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCS 579
Query: 253 RGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV 311
GGL D+G F M ++P ++HY C+VDLLG SGR++EA + I +M +P +
Sbjct: 580 HGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAI 639
Query: 312 WGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMID 371
WG+LL +C++H +V + E A ++L+E+EP +AGNYVILSN+YA A WE V+ LR LM+
Sbjct: 640 WGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLK 699
Query: 372 RGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHD 431
+ + K S IE+ H F + D SHP +EI K+K L KE GYVP V HD
Sbjct: 700 KTVTKEPGRSSIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHD 759
Query: 432 VENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREIT 491
V+ ++K ++ HSE+LA++FGLI +P + + KNL+IC DCH K+ISK+ RE++
Sbjct: 760 VDEEQKEKILLGHSEKLALSFGLIASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVS 819
Query: 492 VRDVNRYHHFKDGICSCGDYW 512
+RD NR+H G CSC DYW
Sbjct: 820 LRDKNRFHRIVGGKCSCEDYW 840
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 84/163 (51%), Gaps = 23/163 (14%)
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
A +G+ +H + R+ +V ++T L+ +Y KC + A N+F+++ E+ VVSW AMI+
Sbjct: 258 AFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMIS 317
Query: 216 GYAMHGHSTKALDLF--------------EKMKDE--------VQPDHITFVGVLSACSR 253
Y+ G++++AL+LF +K+K +P+ TF VL++C+
Sbjct: 318 AYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTS 377
Query: 254 GGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
F GR S++ + + V + ++D+ G++ EA
Sbjct: 378 SLGFILGRQ-IHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEA 419
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/551 (37%), Positives = 331/551 (60%), Gaps = 47/551 (8%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE-I 67
+ + LV +Y C + + ++FD + R + LWN +I Y+ N + A+ L+ + E
Sbjct: 340 VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESA 399
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
GL+ ++ T + AC A IH V++ + D FV L+DMY++ + A
Sbjct: 400 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIA 459
Query: 128 RQVFDKILERD--------------------------------------------PSEAT 143
++F K+ +RD P+ T
Sbjct: 460 MRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSIT 519
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
L+T++ + A ++AL +G+E+H ++ ++ +V V +ALVDMYAKCG ++++R +F+Q+
Sbjct: 520 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRM 262
+K V++WN +I Y MHG+ +A+DL M + V+P+ +TF+ V +ACS G+ DEG
Sbjct: 580 QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 639
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM-RVKPDPGVWGALLNSCKL 321
F M DY ++PS HY C+VDLLG +GR+ EA L+ M R G W +LL + ++
Sbjct: 640 IFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRI 699
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
H ++++ E+A + LI+LEP+ A +YV+L+NIY+ A W+ ++R+ M ++G++K CS
Sbjct: 700 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 759
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMI 441
WIE ++ H F++GD+SHP +++ L+ L RM++ GYVP T V H+VE DEK ++
Sbjct: 760 WIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILL 819
Query: 442 CCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF 501
C HSE+LAIAFG++NT GT + + KNL++C+DCH+A KFISKI +REI +RDV R+H F
Sbjct: 820 CGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRF 879
Query: 502 KDGICSCGDYW 512
K+G CSCGDYW
Sbjct: 880 KNGTCSCGDYW 890
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 175/379 (46%), Gaps = 45/379 (11%)
Query: 2 GFGFHPV-LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
G+G V +A LV+LY C +++FDRI +RN WN LI + +E+A+E
Sbjct: 127 GYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEA 186
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEE---GRRIHEDVIRNKWETDVFVGAALIDM 117
+ +L+ + P +FT + ACS L E G+++H +R K E + F+ L+ M
Sbjct: 187 FRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAM 245
Query: 118 YAKCSCVVNARQVFDKILERD---------------------------------PSEATL 144
Y K + +++ + RD P E T+
Sbjct: 246 YGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTI 305
Query: 145 VTVISASADIAALPQGRELHGFSWRH-RFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
+V+ A + + L G+ELH ++ ++ + N V +ALVDMY C V R +F+ +
Sbjct: 306 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF 365
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGR 261
++++ WNAMI GY+ + H +AL LF M++ + + T GV+ AC R G F
Sbjct: 366 DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKE 425
Query: 262 MFFESMV-RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
+V R D VQ+ ++D+ G++D A + +M + D W ++
Sbjct: 426 AIHGFVVKRGLDRDRFVQN--TLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMITGYV 482
Query: 321 LHGHVKLAELALEKLIELE 339
H + A L L K+ LE
Sbjct: 483 FSEHHEDALLLLHKMQNLE 501
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 150/333 (45%), Gaps = 50/333 (15%)
Query: 41 WNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVI 100
W L+R+ + A+ Y ++ +G+ PDN+ FP LKA + L +E G++IH V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 101 RNKWETD-VFVGAALIDMYAKCSCVVNARQVFDKILER---------------------- 137
+ + D V V L+++Y KC +VFD+I ER
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 138 -----------DPSEATLVTVISASADIA---ALPQGRELHGFSWRHRFELNVKVKTALV 183
+PS TLV+V++A +++ L G+++H + R + ELN + LV
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLV 243
Query: 184 DMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHI 242
MY K G + ++ L + +V+WN +++ + +AL+ +M E V+PD
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGH-----SGRLDEAC 297
T VL ACS + G+ +++ +D + + +VD+ + SGR
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGR--RVF 361
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
D + ++ G+W A++ + H K A L
Sbjct: 362 DGMFDRKI----GLWNAMIAGYSQNEHDKEALL 390
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/532 (39%), Positives = 326/532 (61%), Gaps = 36/532 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T ++ Y++ + A ++FD IP +++ WN +I YA G Y+ A+EL+ ++++ +
Sbjct: 148 TAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVK 207
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD T L C+ +E GR+IH + + + +++ + ALID+Y+KC + A +
Sbjct: 208 PDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGL 267
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F+ + +D P++ T+++++ A A + A+
Sbjct: 268 FEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAI 327
Query: 158 PQGRELHGFSWRHRFEL--NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
GR +H + + + N ++T+L+DMYAKCG ++ A +F+ + K + S NAMI
Sbjct: 328 DIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIF 387
Query: 216 GYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+AMHG + A DL +MK D ++PD ITFVG+LSACS GL D GR F+SM DY I+
Sbjct: 388 GFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIE 447
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY CM+DLLG SG EA +LI M ++PD +WG+LL +CK+H +++L EL +K
Sbjct: 448 PKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQK 507
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L+++EP + G+YV+LSNIYA +A W+ VA++R L+ D+G+KK CS IE+ + H FL
Sbjct: 508 LMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLI 567
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD HP EIY L+ ++ + E G+V T V ++E + K + HSE+LAIAFGL
Sbjct: 568 GDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEMEEELKEGALSYHSEKLAIAFGL 627
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
I+T GT+L I KNL++C +CH A K ISKI +REI RD +R+HHFKDG+C
Sbjct: 628 ISTKPGTKLRIVKNLRVCRNCHEATKLISKIYKREIIARDRSRFHHFKDGMC 679
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 190/425 (44%), Gaps = 70/425 (16%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +F I + N WN +IR +A + A+ LY ++ +GL P+++TFPF K+C+
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLV 145
A +EG++IH +++ D+ V +LI MYA+ V +A +VFD RD
Sbjct: 91 SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRD------- 143
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
V TA++ YA G + A+ +F+++ K
Sbjct: 144 ------------------------------VVSYTAMITGYASRGNMDKAQKMFDEIPIK 173
Query: 206 RVVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
VVSWNAMI+GYA G +AL+LF E MK +V+PD T VLS C+ G + GR
Sbjct: 174 DVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQ-I 232
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
S + ++ +++ ++DL G ++ A L ++ K D W L+ H
Sbjct: 233 HSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYK-DVISWNTLIGGYAYINH 291
Query: 325 VKLAELALEKLIEL--EPHDAGNYVILSNIYARAA----NWEGV---AKLRKLMIDRGIK 375
K A L +++++L P+D IL A W V KL+ ++ + ++
Sbjct: 292 HKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQ 351
Query: 376 KSI-----ACSWIEVKNKA------------HAFLSGDASHPNCDEIYAKLKWLEGRMKE 418
S+ C IE N+ +A + G A H D + L RMK+
Sbjct: 352 TSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLL----SRMKK 407
Query: 419 AGYVP 423
G P
Sbjct: 408 DGIEP 412
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 160/340 (47%), Gaps = 50/340 (14%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ +Y+ + +AH++FD R++ + +I YA G + A +++
Sbjct: 117 TSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMF--------- 167
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
D I K DV A+I YA+ A ++
Sbjct: 168 ---------------------------DEIPIK---DVVSWNAMISGYAEIGRYKEALEL 197
Query: 131 FDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
F+++++ D P E+T+ TV+S + GR++H + H F N+K+ AL+D+Y+K
Sbjct: 198 FNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSK 257
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGV 247
CG ++ A LFE L+ K V+SWN +I GYA H +AL +F++M K P+ +T + +
Sbjct: 258 CGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSI 317
Query: 248 LSACSRGGLFDEGR---MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
L AC+ G D GR ++ + ++ + S+Q T ++D+ G + EA + +
Sbjct: 318 LPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQ--TSLIDMYAKCGNI-EAANQVFDTI 374
Query: 305 VKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHD 342
+ A++ +HG A L ++ + +EP D
Sbjct: 375 LNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDD 414
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 150/331 (45%), Gaps = 40/331 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + L L+ LYS C + AH LF+ + +++ WN LI YA+ ++ A+ ++
Sbjct: 240 GFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVF 299
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWE---TDVFVGAALIDMY 118
+L++G P++ T L AC+ L AI+ GR IH I K + T+ + +LIDMY
Sbjct: 300 QEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHV-YIDKKLKGIITNTSLQTSLIDMY 358
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
AKC + A QVFD IL + S A+ G +HG + F+L ++
Sbjct: 359 AKCGNIEAANQVFDTILNKSLSSCN------------AMIFGFAMHGRA-DAAFDLLSRM 405
Query: 179 K--------TALVDMYAKC---GLVKVARNLFEQLR-----EKRVVSWNAMITGYAMHGH 222
K V + + C GL + R +F+ + E ++ + MI G
Sbjct: 406 KKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGL 465
Query: 223 STKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTC 282
+A +L M ++PD + + +L AC + G + + +++ +P Y
Sbjct: 466 FKEAEELINSMT--MEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPG--SYVL 521
Query: 283 MVDLLGHSGRLDEAC---DLIMQMRVKPDPG 310
+ ++ S R D+ L+ +K PG
Sbjct: 522 LSNIYATSARWDDVARVRTLLNDKGLKKVPG 552
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/536 (39%), Positives = 316/536 (58%), Gaps = 47/536 (8%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
++ Y+ L A +LF+ +P R++F W ++ + NG + A ++ + E V
Sbjct: 252 MITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSW 311
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDV-IRN--KWETDVFVGAALIDMYAKCSCVVNARQ 129
N +++ IE+ R + + + RN W T ++ YA+C + A+
Sbjct: 312 NAMIAGYVQS----QQIEKARELFDQMPSRNTSSWNT-------MVTGYAQCGNIDQAKI 360
Query: 130 VFDKILERD---------------------------------PSEATLVTVISASADIAA 156
+FD++ +RD + + L +S+ A+IAA
Sbjct: 361 LFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAA 420
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
L G++LHG + F+ AL+ MY KCG ++ A ++FE + EK +VSWN MI G
Sbjct: 421 LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480
Query: 217 YAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
YA HG +AL LFE MK ++PD +T VGVLSACS G D+G +F SM ++Y I +
Sbjct: 481 YARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITAN 540
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
+HYTCM+DLLG +GRLDEA +L+ M PD WGALL + ++HG +L E A EK+
Sbjct: 541 AKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVF 600
Query: 337 ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGD 396
E+EP ++G YV+LSN+YA + W V ++R M D+G+KK SW+E++NK H F GD
Sbjct: 601 EMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGD 660
Query: 397 ASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLIN 456
SHP + IYA L+ L+ +K+ G+V T+ V HDVE +EK +M+ HSE+LA+AFG+++
Sbjct: 661 CSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILS 720
Query: 457 TPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
P G + + KNL++C+DCH AIK ISKIT+R+I VRD NR+HHF +G CSCGDYW
Sbjct: 721 IPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 149/321 (46%), Gaps = 38/321 (11%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L A LF+++P++++ WN ++ +A NG E A +++ ++L V + ++ L A
Sbjct: 138 LSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQML----VKNEISWNGLLSA 193
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEA 142
IE+ RR+ + +K + ++ L+ Y + + +AR +FD++ RD +
Sbjct: 194 YVQNGRIEDARRLFD----SKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRD--KI 247
Query: 143 TLVTVISASADIAALPQGRELHG-------FSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
+ +I+ A L + R L F+W TA+V + + G++ A
Sbjct: 248 SWNIMITGYAQNGLLSEARRLFEELPIRDVFAW-----------TAMVSGFVQNGMLDEA 296
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGG 255
+FE++ EK VSWNAMI GY KA +LF++M T V + C G
Sbjct: 297 TRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQC---G 353
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
D+ ++ F+ M + I + M+ SG+ +EA L ++M K D G+
Sbjct: 354 NIDQAKILFDEMPQRDCIS-----WAAMISGYAQSGQSEEALHLFIKM--KRDGGILNRS 406
Query: 316 LNSCKLHGHVKLAELALEKLI 336
+C L ++A L L K +
Sbjct: 407 ALACALSSCAEIAALELGKQL 427
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDH 241
++ Y K G + AR LF Q+ EK VVSWNAM++G+A +G +A +F++M + +
Sbjct: 128 MLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM---LVKNE 184
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
I++ G+LSA + G ++ R F+S +D + + C++ RLD+A L
Sbjct: 185 ISWNGLLSAYVQNGRIEDARRLFDS-----KMDWEIVSWNCLMGGYVRKKRLDDARSLFD 239
Query: 302 QMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+M V+ D W ++ +G + A E+L
Sbjct: 240 RMPVR-DKISWNIMITGYAQNGLLSEARRLFEEL 272
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHI 242
+ Y + G + A ++F +R + V++NAMI+GY + A +FEKM D D I
Sbjct: 67 ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDR---DLI 123
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
++ +LS + G R F M + V + M+ +G ++EA + Q
Sbjct: 124 SWNVMLSGYVKNGNLSAARALFNQMP-----EKDVVSWNAMLSGFAQNGFVEEARKIFDQ 178
Query: 303 MRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
M VK + W LL++ +G ++ A + ++ E
Sbjct: 179 MLVKNEIS-WNGLLSAYVQNGRIEDARRLFDSKMDWE 214
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 10/210 (4%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+ +Y C + A +F+ I ++++ WN +I YA +G + A+ L
Sbjct: 435 GFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALAL- 493
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWET-DVFVGAALIDMYAK 120
+ +++ + PD+ T L ACS +++G + +N T + +ID+ +
Sbjct: 494 FESMKMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGR 553
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL---NVK 177
+ A + K + P AT ++ AS + EL + FE+ N
Sbjct: 554 AGRLDEALNLM-KSMPFYPDAATWGALLGAS----RIHGDTELGEKAAEKVFEMEPDNSG 608
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ L ++YA G + R + ++R+K V
Sbjct: 609 MYVLLSNLYAASGRWREVREMRSKMRDKGV 638
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/518 (38%), Positives = 320/518 (61%), Gaps = 14/518 (2%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ +YS C L A ++F+++ +RN+ W +I Y +G + AI L ++ + G
Sbjct: 150 FSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEG 209
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D L AC+ +++ G+ +H+ + N +++FV AL+DMYAKC + A
Sbjct: 210 VKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGAN 269
Query: 129 QVFDKILERD------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
VF ++ +D P T+ ++ A A ++AL +G+E+HG+ R+ + +
Sbjct: 270 SVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDR 329
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE 236
V ALVD+Y KCG++ +AR LF+ + K +VSW MI GY MHG+ +A+ F +M+D
Sbjct: 330 HVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDA 389
Query: 237 -VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
++PD ++F+ +L ACS GL ++G FF M D++I+P ++HY CMVDLL +G L +
Sbjct: 390 GIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSK 449
Query: 296 ACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYAR 355
A I + + PD +WGALL C+++ ++LAE E++ ELEP + G YV+L+NIYA
Sbjct: 450 AYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAE 509
Query: 356 AANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG-DASHPNCDEIYAKLKWLEG 414
A WE V ++R+ + +G++K+ CSWIE+K + + F+SG ++SHP+ +I + LK +
Sbjct: 510 AEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRR 569
Query: 415 RMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDD 474
+MKE GY P T+ + + +K +C HSE+LA+AFGL+ P + +TKNL++C D
Sbjct: 570 KMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGD 629
Query: 475 CHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
CH KF+SK T REI +RD NR+HHFKDG CSC +W
Sbjct: 630 CHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 667
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 148/314 (47%), Gaps = 28/314 (8%)
Query: 12 KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
KLV Y+ C L ++FD + ++N++LWN ++ YA G ++ +I L+ ++E G+
Sbjct: 1 KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI-- 58
Query: 72 DNFTFPFALKACSALSAIEEGRRIHE--DVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
EG+R ++ + DV ++I Y
Sbjct: 59 -------------------EGKRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLG 99
Query: 130 VFDKI--LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYA 187
++ ++ L D AT+++V+ A L G+ +H + + FE + L+DMY+
Sbjct: 100 IYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYS 159
Query: 188 KCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVG 246
KCG + A +FE++ E+ VVSW +MI GY G S A+ L ++M+ E V+ D +
Sbjct: 160 KCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITS 219
Query: 247 VLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK 306
+L AC+R G D G+ + ++ ++ ++ ++D+ G ++ A + M VK
Sbjct: 220 ILHACARSGSLDNGKDVHD-YIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVK 278
Query: 307 PDPGVWGALLNSCK 320
D W ++ K
Sbjct: 279 -DIISWNTMVGELK 291
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 111/262 (42%), Gaps = 34/262 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ +A LV LY C L A LFD IP ++L W V+I Y +G AI +
Sbjct: 324 GYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATF 383
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYA 119
+ + G+ PD +F L ACS +E+G R +++N + E + A ++D+ +
Sbjct: 384 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY-IMKNDFNIEPKLEHYACMVDLLS 442
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHR-----FEL 174
+ + A + + TL A+ A L R H + FEL
Sbjct: 443 RTGNLSKAYKFIE----------TLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFEL 492
Query: 175 ---NVKVKTALVDMYAKCGLVKVARNLFEQ-----LREKRVVSW-------NAMITG-YA 218
N L ++YA+ + + + E+ LR+ SW N ++G +
Sbjct: 493 EPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNS 552
Query: 219 MHGHSTKALDLFEKMKDEVQPD 240
H HS K L +KM+ +++ +
Sbjct: 553 SHPHSKKIESLLKKMRRKMKEE 574
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/545 (40%), Positives = 326/545 (59%), Gaps = 41/545 (7%)
Query: 4 GFHPV--LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P+ L L+++Y + L++AHQLFD++PQRN+ W +I AY+ ++ A+EL
Sbjct: 91 GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELL 150
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+L + P+ +T+ L++C+ +S + R +H +I+ E+DVFV +ALID++AK
Sbjct: 151 VLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKL 207
Query: 122 SCVVNARQVFDKILERDP---------------------------------SEATLVTVI 148
+A VFD+++ D +ATL +V+
Sbjct: 208 GEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVL 267
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A +A L G + H + ++ ++ + ALVDMY KCG ++ A +F Q++E+ V+
Sbjct: 268 RACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVI 325
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W+ MI+G A +G+S +AL LFE+MK +P++IT VGVL ACS GL ++G +F SM
Sbjct: 326 TWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSM 385
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ Y IDP +HY CM+DLLG +G+LD+A L+ +M +PD W LL +C++ ++ L
Sbjct: 386 KKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVL 445
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE A +K+I L+P DAG Y +LSNIYA + W+ V ++R M DRGIKK CSWIEV
Sbjct: 446 AEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNK 505
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ HAF+ GD SHP E+ KL L R+ GYVP T V D+E ++ + + HSE+
Sbjct: 506 QIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEK 565
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+AFGL+ P + I KNL+IC DCH+ K SK+ R I +R RYHHF+DG CS
Sbjct: 566 LALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCS 625
Query: 508 CGDYW 512
CGDYW
Sbjct: 626 CGDYW 630
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 132/299 (44%), Gaps = 35/299 (11%)
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
GL D+ T+ +K C + A+ EG I + N +F+ LI+MY K + + +A
Sbjct: 56 GLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDA 115
Query: 128 RQVFDK------------------------------ILERDPSEATLVTVISASADIAAL 157
Q+FD+ ++ RD + T S +
Sbjct: 116 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGM 175
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
R LH + E +V V++AL+D++AK G + A ++F+++ + WN++I G+
Sbjct: 176 SDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGF 235
Query: 218 AMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
A + S AL+LF++MK + T VL AC+ L + G ++ V D
Sbjct: 236 AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG---MQAHVHIVKYDQD 292
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+ +VD+ G L++A + QM+ + D W +++ +G+ + A E++
Sbjct: 293 LILNNALVDMYCKCGSLEDALRVFNQMKER-DVITWSTMISGLAQNGYSQEALKLFERM 350
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/505 (43%), Positives = 302/505 (59%), Gaps = 34/505 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+AT L+ +Y C ++FD ++ N L+ + N A+ L+ + G
Sbjct: 193 VATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRG 252
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ + ++ + C ++ GR + +D++ R
Sbjct: 253 IELNVVSWTSIVACC-----VQNGRDLEA-----------------VDLF---------R 281
Query: 129 QVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
++ + +E P+ T+ V+ A A+IAAL GR H FS R F ++ V +ALVDMYAK
Sbjct: 282 EMQSEGIE--PNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAK 339
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGV 247
CG V+ AR +FE + + VVSWNAMI GYAMHG + A+ LF M+ + PD +TF V
Sbjct: 340 CGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCV 399
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
L ACS+ G +EGR +F M + I P ++HY CMV LLG +G+LD+A D+I QM +P
Sbjct: 400 LGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEP 459
Query: 308 DPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRK 367
D +WG+LL SC++HG+V LAE+A E L +LEP +AGNYV+LSNIYA W+GV +LR
Sbjct: 460 DGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRD 519
Query: 368 LMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTES 427
+M G+KK CSWIE+KNK H L+GD+SHP I KLK L M+ G+ P T+
Sbjct: 520 MMKTVGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDY 579
Query: 428 VFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITE 487
V HDVE EK +++ HSE+LA+A GLI+T GT L + KNL+IC DCH A+KFIS
Sbjct: 580 VLHDVEEQEKDDILSVHSEKLAVALGLISTSHGTPLQVIKNLRICGDCHEAMKFISSFER 639
Query: 488 REITVRDVNRYHHFKDGICSCGDYW 512
REI VRD NR+HHFKDG CSC DYW
Sbjct: 640 REIYVRDTNRFHHFKDGKCSCADYW 664
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 146/357 (40%), Gaps = 73/357 (20%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A+ L+H Y +A + D +P R + W+ LI A+A +G E A L R+ G
Sbjct: 57 VASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDG 116
Query: 69 LVPDNFT-----------------------------FPFALKACSALSAIEE------GR 93
+ P+ T P A ALSA+ + G
Sbjct: 117 VEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGE 176
Query: 94 RIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASAD 153
++H V++ D V ALIDMY KC +VFD E++ + V S +A
Sbjct: 177 QLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFD--------ESSHMDVASCNAL 228
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+A L + N +V AL ++ R + E VVSW ++
Sbjct: 229 VAGLSR---------------NAQVSEAL----------RLFREFVGRGIELNVVSWTSI 263
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF-ESMVRDY 271
+ +G +A+DLF +M+ E ++P+ +T VL A + GR S+ + +
Sbjct: 264 VACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGF 323
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
H D V + +VD+ GR+ +A +I + + W A++ +HG + A
Sbjct: 324 HHDIYVG--SALVDMYAKCGRVRDA-RMIFEAMPYRNVVSWNAMIGGYAMHGEAENA 377
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFH + + LV +Y+ C + +A +F+ +P RN+ WN +I YA +G E A+ L+
Sbjct: 322 GFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLF 381
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
+ PD TF L ACS EEGR
Sbjct: 382 RSMQSSKEKPDLVTFTCVLGACSQAGWTEEGR 413
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 99/212 (46%), Gaps = 9/212 (4%)
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DE 236
V ++L+ Y + G AR++ + + + VV W+A+I +A HG + A L E+M+ D
Sbjct: 57 VASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDG 116
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL--- 293
V+P+ IT+ G++S +R G + + M + + P +C + +G G +
Sbjct: 117 VEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFL-PDATGVSCALSAVGDVGDVAVG 175
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIY 353
++ +++ + D V AL++ ++G A+ + E D + L
Sbjct: 176 EQLHGYVVKAGCRLDACVATALID---MYGKCGRADEIVRVFDESSHMDVASCNALVAGL 232
Query: 354 ARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+R A +L + + RGI+ ++ SW +
Sbjct: 233 SRNAQVSEALRLFREFVGRGIELNVV-SWTSI 263
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 89/238 (37%), Gaps = 48/238 (20%)
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
L + PD P ALK+CSAL ++ D FV ++L+ Y +
Sbjct: 14 LRHVSFPPDPRLLPSALKSCSALRLARALHAAAAVAGVSR---DAFVASSLLHAYLRFGA 70
Query: 124 VVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALV 183
+AR V D + R TV+ SA IAA
Sbjct: 71 TADARSVLDGMPHR--------TVVGWSALIAA--------------------------- 95
Query: 184 DMYAKCGLVKVARNLFEQLR----EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQ 238
+A G + A L E++R E V++WN +++G G + A+ +M E
Sbjct: 96 --HASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFL 153
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDE 295
PD LSA G G +V+ +D V T ++D+ G GR DE
Sbjct: 154 PDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVA--TALIDMYGKCGRADE 209
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/540 (39%), Positives = 323/540 (59%), Gaps = 28/540 (5%)
Query: 1 MGFGFHPVLATKLVHLYSACD---CLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVA 57
MGF ++ LV +Y+ + + A+++F+R+ + ++ W LI Y +G E
Sbjct: 283 MGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENK 342
Query: 58 IE-LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
+ L+ +L + P++ T+ LKAC+ +S + GR++H VI++ VG AL+
Sbjct: 343 VMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVS 402
Query: 117 MYAKCSCVVNARQVFDKILERDP-----------------------SEATLVTVISASAD 153
MYA+ C+ AR+VF+++ ER S +T ++ISA+A
Sbjct: 403 MYAESGCMEEARRVFNQLYERSMISCITEGRDAPLDHRIGRMDMGISSSTFASLISAAAS 462
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+ L +G++LH + + F + V +LV MY++CG ++ A F +L+++ V+SW +M
Sbjct: 463 VGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSM 522
Query: 214 ITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I+G A HG++ +AL LF M V+P+ +T++ VLSACS GL EG+ +F SM RD+
Sbjct: 523 ISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHG 582
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
+ P ++HY CMVDLL SG + EA + I +M +K D VW LL +C+ H ++++ E+A
Sbjct: 583 LIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAA 642
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
+ +IELEP D YV+LSN+YA A W+ VA++R M D + K SW+EV+N H F
Sbjct: 643 KNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEF 702
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
+GD SHP +IY KL L G +K GYVP T V HD+ ++ K + HSE++A+AF
Sbjct: 703 RAGDTSHPRAQDIYGKLDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAF 762
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
GLI T + I KNL++C DCH AIK++SK T REI +RD NR+H KDG CSCG+YW
Sbjct: 763 GLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 161/339 (47%), Gaps = 46/339 (13%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQ-RNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
V+A L+ LYS C + +A +FD + R++ W + A NG ++ L +LE
Sbjct: 85 VVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEMLE 144
Query: 67 IGLVPDNFTFPFALKAC--SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
GL+P+ +T AC L + G + W TD+ VG+ALIDM A+ +
Sbjct: 145 SGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGTDIAVGSALIDMLARNGDL 204
Query: 125 VNARQVFDKILER---------------------------------DPSEATLVTVISAS 151
+AR+VFD ++E+ +P T+ ++ISA
Sbjct: 205 ASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMISAC 264
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV---ARNLFEQLREKRVV 208
++ ++ G +LH + R F + V LVDMYAK + + A +FE++R+ V+
Sbjct: 265 TELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVI 324
Query: 209 SWNAMITGYAMHG-HSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
SW A+I+GY G K + LF +M +E ++P+HIT+ +L AC+ D GR
Sbjct: 325 SWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAH 384
Query: 267 MVRDYHIDPSVQHY--TCMVDLLGHSGRLDEACDLIMQM 303
+++ + + H +V + SG ++EA + Q+
Sbjct: 385 VIKS---NQAAAHTVGNALVSMYAESGCMEEARRVFNQL 420
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 177/412 (42%), Gaps = 52/412 (12%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
+G + + L+ + + L +A ++FD + ++ + +W +LI Y E A+E++
Sbjct: 184 WGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFL 243
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
LE G PD +T + AC+ L ++ G ++H +R + +D V L+DMYAK +
Sbjct: 244 DFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSN 303
Query: 123 ---CVVNARQVFDKILERD----------------------------------PSEATLV 145
+ A +VF+++ + D P+ T
Sbjct: 304 IEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYS 363
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+++ A A+I+ GR++H + V ALV MYA+ G ++ AR +F QL E+
Sbjct: 364 SILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYER 423
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
++S IT G +M + TF ++SA + G+ +G+
Sbjct: 424 SMISC---IT----EGRDAPLDHRIGRMDMGISSS--TFASLISAAASVGMLTKGQQLHA 474
Query: 266 SMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
++ + D V + +V + G L++AC +++ + + W ++++ HG+
Sbjct: 475 MTLKAGFGSDRFVSN--SLVSMYSRCGYLEDACRSFNELKDR-NVISWTSMISGLAKHGY 531
Query: 325 VKLAELALEKLI--ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
+ A +I ++P+D +LS EG R + D G+
Sbjct: 532 AERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGL 583
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 157 LPQGRELHGFSWRHRF-ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR-VVSWNAMI 214
L GR LH R + + V +L+ +Y++CG V ARN+F+ +R R +VSW AM
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 215 TGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSAC 251
+ A +G ++L L E ++ + P+ T V AC
Sbjct: 124 SCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHAC 161
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/572 (39%), Positives = 315/572 (55%), Gaps = 62/572 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF H + T L++LYS A +FD P + LWN +IRAY + Y A+E+Y
Sbjct: 79 GFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMY 137
Query: 62 YRLLEIG-LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN---KWET---------DV 108
Y ++E G L D F + S + ++ R + + + + W D
Sbjct: 138 YCMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDP 197
Query: 109 FVGAALIDM---------------YAKCSCVVNARQVFDKI------------------- 134
+V + D YA C V ++FDK+
Sbjct: 198 YVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVTWNVIIAAYMQNGH 257
Query: 135 ------------LER-DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
LE P+ T V+V+ A+A +AA +G H + F N V +
Sbjct: 258 AKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNS 317
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPD 240
L+DMYAKCG + + LF ++ K VSWNAM++GYA+HGH +A+ LF M++ +VQ D
Sbjct: 318 LIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQID 377
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
++FV VLSAC GL +EGR F SM YHI P ++HY CMVDLLG +G DE I
Sbjct: 378 SVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFI 437
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
M V+PD GVWGALL SC++H +VKL E+AL+ L++LEP + ++V+LS+IYA++ W
Sbjct: 438 KVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWA 497
Query: 361 GVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAG 420
K R M D G+KK+ CSW+E+KNK HAF GD SHP + ++ L +M++ G
Sbjct: 498 DAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIG 557
Query: 421 YVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIK 480
YVP V +VE ++K + HSERLAI F L+NTP G+ + I KNL++C DCH K
Sbjct: 558 YVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTK 617
Query: 481 FISKITEREITVRDVNRYHHFKDGICSCGDYW 512
FISKIT R I VRD R+HHF+DGICSC DYW
Sbjct: 618 FISKITTRRIIVRDATRFHHFEDGICSCNDYW 649
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 139/334 (41%), Gaps = 81/334 (24%)
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA---KCSCVVNARQVFD 132
+P L +C L+ + + IH +I + ++ + LI++Y+ KC AR VFD
Sbjct: 55 YPRLLSSCKHLNPLLQ---IHAQIIVSGFKHHHSI-THLINLYSLFHKCDL---ARSVFD 107
Query: 133 KILERDPSEATLVTVISASADIAALPQGRELHG-FSWRHRFELNVKVKTALVDMYAKCGL 191
+PS ++I A + E++ + E +V + LVDMY+K G
Sbjct: 108 ST--PNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGD 165
Query: 192 VKVARNLFEQLREKRVVSWNAMI-------------------------------TGYAMH 220
+K AR +F+++ ++ VV+WNAMI GYA +
Sbjct: 166 LKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHN 225
Query: 221 GHSTKALDLFEKMK-------------------------------DEVQPDHITFVGVLS 249
G + L+LF+KMK + P+ +TFV VL
Sbjct: 226 GCFVEVLELFDKMKLGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLP 285
Query: 250 ACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
A + F EG F +++ + ++ ++D+ G+LD + L +M K D
Sbjct: 286 AAAYLAAFREGMAFHACIIQMGFLSNTLVG-NSLIDMYAKCGQLDYSEKLFNEMDHK-DT 343
Query: 310 GVWGALLNSCKLHGH----VKLAELALEKLIELE 339
W A+L+ +HGH + L L E ++++
Sbjct: 344 VSWNAMLSGYAVHGHGDRAIALFSLMQESQVQID 377
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MGF + ++ L+ +Y+ C L + +LF+ + ++ WN ++ YA +G + AI L
Sbjct: 306 MGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIAL 365
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRI-HEDVIRNKWETDVFVGAALIDMYA 119
+ + E + D+ +F L AC +EEGR+I H + + D+ A ++D+
Sbjct: 366 FSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLG 425
Query: 120 KCSCVVNARQVFDKILERDP 139
+ + + F K++ +P
Sbjct: 426 RAG-LFDETLGFIKVMPVEP 444
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/545 (38%), Positives = 324/545 (59%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + ++A V Y+ C L A ++F + + + WN LI A NG A+ LY
Sbjct: 266 GFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLY 325
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ GLVPD FT L A + L ++ G+ +H V+R+ E D F+G +L+ +Y C
Sbjct: 326 IQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHC 385
Query: 122 SCVVNARQVFDKILER---------------------------------DPSEATLVTVI 148
+AR +FD + E+ PS+ +V+V+
Sbjct: 386 GESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVL 445
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A + +AL G+E H ++ + +V V + +DMYAK G +K +R++F+ L+ K +
Sbjct: 446 GACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLA 505
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNA+I Y +HG ++++LFE+M+ Q PD TF+G+L+ CS GL +EG +F M
Sbjct: 506 SWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEM 565
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ I+P ++HY C++D+LG +GRLD+A L+ +M +PD VW +LL+ C+ G +++
Sbjct: 566 QNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEI 625
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
++ EKL+ELEP + NYV LSN+YA + W+ V ++R+++ D G++K CSWIE+
Sbjct: 626 GQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGG 685
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K H+F++GD P E+ + LE +M + GY P T +V HDV+ ++K + HSE+
Sbjct: 686 KVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKIGYKPNTSAVLHDVDEEKKIEKLRGHSEK 745
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAI FGL+NT GT L I KNL+IC DCH A KF+S++T REI +RD R+HHFKDG+CS
Sbjct: 746 LAICFGLLNTTKGTTLRIFKNLRICVDCHNASKFMSEVTGREIIIRDNKRFHHFKDGLCS 805
Query: 508 CGDYW 512
CGDYW
Sbjct: 806 CGDYW 810
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 173/397 (43%), Gaps = 43/397 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG + L+ +Y + A ++F +P RNL WN +I ++ NG + ++
Sbjct: 60 MGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDM 119
Query: 61 YYRLL--EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
++ E GL+PD T L C+ ++ G RIH ++ DV V +L+DMY
Sbjct: 120 LVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMY 179
Query: 119 AKCSCVVNARQVFDK---------------------ILER-------------DPSEATL 144
+KC + A+ +FDK I E + +E T+
Sbjct: 180 SKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTV 239
Query: 145 VTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE 204
+ ++ A +I+ L +ELHG+S RH F+ + V V YAKCG++ A +F +
Sbjct: 240 LNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMET 299
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMF 263
K V SWNA+I G A +G KAL+L+ +M + PD T +L A + G+
Sbjct: 300 KTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEV 359
Query: 264 FESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
++R ID + ++ L H G A L M K W A+++ +
Sbjct: 360 HGFVLRHGLEIDSFIG--ISLLSLYIHCGESSSARLLFDGMEEKSSVS-WNAMISGYSQN 416
Query: 323 GHVKLAELALEKLIE--LEPHDAGNYVILSNIYARAA 357
G + A + KL+ +P D +L ++A
Sbjct: 417 GLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSA 453
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 114/239 (47%), Gaps = 38/239 (15%)
Query: 51 NGPYEVAIELYYRLL-EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVF 109
N Y AI+++ +L+ + DNFTFP +KAC+ G IH VI+ DVF
Sbjct: 8 NELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVF 67
Query: 110 VGAALIDMYAKCSCVVNARQVFDKILERD------------------------------- 138
VG ALI MY K V A +VF + R+
Sbjct: 68 VGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGE 127
Query: 139 ----PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV 194
P ATLVTV+ A + G +HG + + +V+V +LVDMY+KCG +
Sbjct: 128 EGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTE 187
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE--KMKDEVQPDHITFVGVLSAC 251
A+ LF++ K VSWN MI G G+ +A +LF +M+++++ + +T + +L AC
Sbjct: 188 AQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPAC 246
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 114/277 (41%), Gaps = 22/277 (7%)
Query: 95 IHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADI 154
+H V RN+ +D IDM+ K + D E + T VI A
Sbjct: 1 MHVAVHRNELYSDA------IDMFVKL--------ITDT--EFNADNFTFPCVIKACTGS 44
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
G +HG + L+V V AL+ MY K G V A +F + + +VSWN++I
Sbjct: 45 LDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSII 104
Query: 215 TGYAMHGHSTKALDLFEKM---KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
+G++ +G S D+ +M ++ + PD T V VL C+R G + +
Sbjct: 105 SGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMG-IRIHGLAVKL 163
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
+ V+ +VD+ G L EA ++ + + W ++ G++
Sbjct: 164 GLSEDVRVNNSLVDMYSKCGYLTEA-QMLFDKNNRKNAVSWNTMIGGLCTKGYI-FEAFN 221
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKL 368
L + ++++ N V + NI + L++L
Sbjct: 222 LFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKEL 258
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/522 (40%), Positives = 310/522 (59%), Gaps = 35/522 (6%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +F +I + F +N +IR + E A+ LY +LE G+ PDNFT+PF LKACS
Sbjct: 84 ACSIFRQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSL 143
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
L A++EG +IH V E DVFV LI MY KC + +A VF+++ E+
Sbjct: 144 LVALKEGVQIHAHVFNAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSI 203
Query: 139 ---------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHR 171
E+ LV+ +SA + + GR +HG R+
Sbjct: 204 IGAHASVEMWHECLMLLGDMSREGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNI 263
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
ELNV VKT+L+DMY KCG ++ +F+ + K S+ MI G A+HG +AL +F
Sbjct: 264 SELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREALRVFS 323
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
M +E + PD + +VGVLSACS GL EG F M ++ I P++QHY CMVDL+G +
Sbjct: 324 DMLEEGLTPDDVVYVGVLSACSHAGLVKEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGRA 383
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
G L EA DLI M +KP+ VW +LL++CK+H ++++ E+A + + +L H+ G+Y++L+
Sbjct: 384 GMLKEAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEIGEIAADNIFKLNKHNPGDYLVLA 443
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
N+YARA W VA++R M+++ + ++ S +E + F+S D S P C+ IY ++
Sbjct: 444 NMYARAQKWANVARIRTEMVEKNLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQ 503
Query: 411 WLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLK 470
+E ++K GY P V DV+ DEK + HS++LAIAF LI T +G+ + I++NL+
Sbjct: 504 QMEWQLKFEGYTPDMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSPVRISRNLR 563
Query: 471 ICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+C+DCH KFIS I EREITVRD NR+HHFKDG CSC DYW
Sbjct: 564 MCNDCHTYTKFISVIYEREITVRDSNRFHHFKDGTCSCKDYW 605
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+ T L+ +Y C L +F + +N + + V+I A +G A+ ++ +LE
Sbjct: 269 VVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREALRVFSDMLEE 328
Query: 68 GLVPDNFTFPFALKACSALSAIEEG 92
GL PD+ + L ACS ++EG
Sbjct: 329 GLTPDDVVYVGVLSACSHAGLVKEG 353
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/536 (40%), Positives = 312/536 (58%), Gaps = 34/536 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
+ L+H+Y++C + A +FD + + +WN ++ AY NG + +E++ +LE+G+
Sbjct: 159 SSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVA 218
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
D T + AC + + G+ + V + + AL+DMYAKC + AR++
Sbjct: 219 FDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRL 278
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
FD + RD P++ T+V+V+SA A + AL
Sbjct: 279 FDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGAL 338
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
G+ +H + R R L + TALVD YAKCG + A FE + K +W A+I G
Sbjct: 339 ETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGM 398
Query: 218 AMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
A +G +AL+LF M++ ++P +TF+GVL ACS L +EGR F+SM RDY I P
Sbjct: 399 ATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPR 458
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
V+HY CMVDLLG +G +DEA I M ++P+ +W ALL+SC +H +V + E AL+++I
Sbjct: 459 VEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQII 518
Query: 337 ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGD 396
L P +G+YV+LSNIYA A W+ A +RK M DRGI+K+ CS IE+ F + D
Sbjct: 519 SLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGVVFEFFAED 578
Query: 397 ASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLIN 456
+ HP EIY K++ + GR+K AGYVP T V +VE EK + HSE+LAIAFGL+
Sbjct: 579 SDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVEEREKEVSVSHHSEKLAIAFGLMK 638
Query: 457 TPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
G + ++KNL++C DCH A K ISK+ +REI VRD N +HHFKDG CSC DYW
Sbjct: 639 LDPGATIRLSKNLRVCADCHSATKLISKVYDREIVVRDRNIFHHFKDGTCSCNDYW 694
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 170/383 (44%), Gaps = 40/383 (10%)
Query: 34 PQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV--PDNFTFPFALKACSALSAIEE 91
P + +NVL+RA+ G E A+ L+ +L D T ALK+CS + A++
Sbjct: 79 PPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDV 138
Query: 92 GRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP------------ 139
GR + ++ D FV ++LI MYA C V AR VFD E
Sbjct: 139 GRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLK 198
Query: 140 ---------------------SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
E TLV+V++A I G+ + G N K+
Sbjct: 199 NGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKL 258
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEV 237
TAL+DMYAKCG + AR LF+ ++ + VV+W+AMI+GY +AL LF +M+ V
Sbjct: 259 VTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARV 318
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
+P+ +T V VLSAC+ G + G+ + S VR + + T +VD G +D+A
Sbjct: 319 EPNDVTMVSVLSACAVLGALETGK-WVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAV 377
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHDAGNYVILSNIYAR 355
+ M VK + W AL+ +G + A + E +EP D +L
Sbjct: 378 EAFESMPVK-NSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHS 436
Query: 356 AANWEGVAKLRKLMIDRGIKKSI 378
EG + D GIK +
Sbjct: 437 CLVEEGRRHFDSMARDYGIKPRV 459
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+L T LV Y+ C C+ +A + F+ +P +N + W LI+ A NG A+EL+ + E
Sbjct: 358 ILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREA 417
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN-KWETDVFVGAALIDMYAKCSCVVN 126
G+ P + TF L ACS +EEGRR + + R+ + V ++D+ + V
Sbjct: 418 GIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDE 477
Query: 127 ARQVFDKILERDPSEATLVTVISASA 152
A Q F + + +P+ ++S+ A
Sbjct: 478 AYQ-FIRTMPIEPNAVIWRALLSSCA 502
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/546 (39%), Positives = 317/546 (58%), Gaps = 37/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+ ++S+ C A +F ++ ++L W +I Y NG E A+E Y
Sbjct: 326 GFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETY 385
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+VPD T L AC+ L +++G +HE R + V V +LIDMY+KC
Sbjct: 386 TIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKC 445
Query: 122 SCVVNARQVFDKI--------------------------------LERDPSEATLVTVIS 149
C+ A +VF +I L P+ TLV+V+S
Sbjct: 446 RCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLS 505
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A A I AL G+E+H + R + + AL+DMY +CG ++ A N F EK V S
Sbjct: 506 ACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVAS 564
Query: 210 WNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WN ++TGYA G A++LF KM + +V PD ITF +L ACSR G+ +G +FESM
Sbjct: 565 WNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESME 624
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+HI P+++HY +VDLLG +GRL++A + I +M + PDP +WGALLN+C+++ +V+L
Sbjct: 625 HKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELG 684
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
ELA + + E++ G Y++L N+YA + W+ VA++RK+M + + CSW+EV +
Sbjct: 685 ELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQ 744
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
HAFL+GD HP EI A L+ +M+ G +S D++ KA + C HSERL
Sbjct: 745 VHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRRDDIDAS-KAEIFCGHSERL 803
Query: 449 AIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
AIAFGLINT GT + +TKNL +C++CH +KFISK+ R I+VRD ++HHFKDG+CSC
Sbjct: 804 AIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSC 863
Query: 509 GD--YW 512
GD YW
Sbjct: 864 GDEGYW 869
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 187/379 (49%), Gaps = 41/379 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+ ++ L A +F ++ +R+LF WNVL+ YA G ++ A+ LY+R+L +G
Sbjct: 131 LGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVG 190
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD +TFP L+ C L + GR +H VIR +E+DV V ALI MY KC + +AR
Sbjct: 191 IRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSAR 250
Query: 129 QVFDKILER---------------------------------DPSEATLVTVISASADIA 155
VFD++ R DP T+ +VISA +
Sbjct: 251 LVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALG 310
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
GRE+HG+ + F V V +L+ M++ G A +F ++ K +VSW AMI+
Sbjct: 311 DERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMIS 370
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GY +G KA++ + M+ E V PD IT VLSAC+ GL D+G M E R +
Sbjct: 371 GYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRT-GLT 429
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGHVKLAELAL 332
V ++D+ +D+A ++ ++ P+ V W +++ +L+ A
Sbjct: 430 SYVIVANSLIDMYSKCRCIDKALEVFHRI---PNKNVISWTSIILGLRLNYRSFEALFFF 486
Query: 333 EKLI-ELEPHDAGNYVILS 350
+++I L+P+ +LS
Sbjct: 487 QQMILSLKPNSVTLVSVLS 505
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 165/370 (44%), Gaps = 38/370 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+ +Y C + +A +FDR+P+R+ WN +I Y N + L+
Sbjct: 225 GFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLF 284
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + E + PD T + AC AL GR +H VI+ + +V V +LI M++
Sbjct: 285 FMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSV 344
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
C A VF K+ +D P E T+ +V+
Sbjct: 345 GCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVL 404
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A + L +G LH F+ R V V +L+DMY+KC + A +F ++ K V+
Sbjct: 405 SACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVI 464
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
SW ++I G ++ S +AL F++M ++P+ +T V VLSAC+R G G+ +
Sbjct: 465 SWTSIILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHAL 524
Query: 269 RD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
R D + + ++D+ GR++ A + + D W LL G L
Sbjct: 525 RTGLGFDGFLPN--ALLDMYVRCGRMEPAWNQFNS--CEKDVASWNILLTGYAQQGKGGL 580
Query: 328 AELALEKLIE 337
A K+IE
Sbjct: 581 AVELFHKMIE 590
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 143/332 (43%), Gaps = 39/332 (11%)
Query: 42 NVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR 101
N LI G E A+ + E+ + + T+ L+ C A EG R+H V +
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 102 NKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----------------------- 138
V +G AL+ M+ + +V A VF K+ ERD
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182
Query: 139 ----------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
P T V+ + L +GRE+H R+ FE +V V AL+ MY K
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGV 247
CG + AR +F+++ + +SWNAMI+GY + + L LF M++ V PD +T V
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
+SAC G GR +++ + V ++ + G DEA + +M K
Sbjct: 303 ISACEALGDERLGREVHGYVIKTGFV-AEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFK- 360
Query: 308 DPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
D W A+++ + +G L E A+E +E
Sbjct: 361 DLVSWTAMISGYEKNG---LPEKAVETYTIME 389
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/533 (41%), Positives = 319/533 (59%), Gaps = 36/533 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++ L+++YS L +A +FD++ R+L WN +I AY N A+ + + G
Sbjct: 259 VSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGG 318
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAKCSCVVNA 127
+ PD T S LS R I VIR +W + DV +G AL++MYAK + A
Sbjct: 319 IRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCA 378
Query: 128 RQVFDKILERD----------------------------------PSEATLVTVISASAD 153
VFD++ +D P++ T V++I A +
Sbjct: 379 HTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSH 438
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+ AL QG ++H ++ L+V V T L+D+Y KCG ++ A +LF ++ V WNA+
Sbjct: 439 VGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAI 498
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I +HG +AL LF+ M E V+ DHITFV +LSACS GL DEG+ F+ M ++Y
Sbjct: 499 IASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYG 558
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I PS++HY CMVDLLG +G L++A +L+ M ++PD +WGALL++CK++G+ +L LA
Sbjct: 559 IKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLAS 618
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
++L+E++ + G YV+LSNIYA WEGV K+R L DRG++K+ S + V +KA F
Sbjct: 619 DRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVF 678
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
+G+ +HP EIY +LK L +MK GYVP V+ D+E DEK ++ HSERLAIAF
Sbjct: 679 YTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAF 738
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
G+I+TP + + I KNL++C DCH A K+IS+I+EREI VRD NR+HHFKDGI
Sbjct: 739 GIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGI 791
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 181/361 (50%), Gaps = 42/361 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MGF +A LVHLYS L AH++F +P +++ WN +I + NG A+ +
Sbjct: 150 MGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGV 209
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
R+ G+ D T L C+ + G IH V+++ ++DVFV ALI+MY+K
Sbjct: 210 LNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSK 269
Query: 121 CSCVVNARQVFDKILER----------------DPSEAT--------------LVTVISA 150
+ +A+ VFD++ R DPS A L+TV+S
Sbjct: 270 FGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSL 329
Query: 151 SADIAALPQ---GRELHGFSWRHR-FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ + L R + GF R + +V + ALV+MYAK G + A +F+QL K
Sbjct: 330 TSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKD 389
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKD--EVQPDHITFVGVLSACSRGGLFDEGRMFF 264
+SWN ++TGY +G +++A+D + M++ + P+ T+V ++ A S G +G
Sbjct: 390 TISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIH 449
Query: 265 ESMVRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV-WGALLNSCKLH 322
++++ ++D V TC++DL G GRL++A L + + D V W A++ S +H
Sbjct: 450 AKLIKNSLYLDVFVA--TCLIDLYGKCGRLEDAMSLFYE--IPRDTSVPWNAIIASLGIH 505
Query: 323 G 323
G
Sbjct: 506 G 506
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 165/354 (46%), Gaps = 42/354 (11%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL+TKL++LY + + FD I ++N+F WN +I AY G Y A+ +L +
Sbjct: 55 VLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSM 114
Query: 68 ----GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
L PD +TFP LKAC +L +G+++H V + +E DVFV A+L+ +Y++
Sbjct: 115 CGGGHLRPDFYTFPPILKACVSLV---DGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGV 171
Query: 124 VVNARQVFDK---------------------------ILERDPSEATLVTVISASADIAA 156
+ A +VF +L R E + I+ ++ +
Sbjct: 172 LDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPV 231
Query: 157 LPQ------GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
Q G +H +H + +V V AL++MY+K G ++ A+ +F+Q+ + +VSW
Sbjct: 232 CAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSW 291
Query: 211 NAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
N++I Y + + AL F+ M+ ++PD +T V + S S+ R ++R
Sbjct: 292 NSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIR 351
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+D V +V++ G ++ A + Q+ K D W L+ +G
Sbjct: 352 REWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRK-DTISWNTLVTGYTQNG 404
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMH 220
++LH N+ + T L+++Y G + ++R+ F+ + +K + SWN++I+ Y
Sbjct: 39 KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98
Query: 221 GHSTKALDLFEKM-----KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
G +A++ ++ ++PD TF +L AC L D ++ V +
Sbjct: 99 GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV--SLVDGKKV--HCCVFKMGFED 154
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
V +V L G LD A + + M VK D G W A+++ +G+ A L ++
Sbjct: 155 DVFVAASLVHLYSRYGVLDVAHKVFVDMPVK-DVGSWNAMISGFCQNGNAAGALGVLNRM 213
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/568 (38%), Positives = 322/568 (56%), Gaps = 68/568 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQ--RNLFLWNVLIRAYAWNGPY-EVAIELYYRL- 64
+A+ LV +Y++ + + +A ++FD +P+ R L +WN +I YA +G E AIEL+ R+
Sbjct: 298 VASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRME 357
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
E G P T L AC+ +H V++ ++ FV AL+DMYA+ +
Sbjct: 358 AEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRM 417
Query: 125 VNARQVFDKILERD---------------------------------------------- 138
A +F I RD
Sbjct: 418 DEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTS 477
Query: 139 -------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGL 191
P+ TL+T++ A +AA +G+E+HG++ RH E ++ V +ALVDMYAKCG
Sbjct: 478 VDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGC 537
Query: 192 VKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLS 249
+ +AR +F++L + V++WN +I Y MHG +AL LF++M E P+ +TF+ L+
Sbjct: 538 LALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALA 597
Query: 250 ACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
ACS GL D G F+ M RDY +P+ + C+VD+LG +GRLDEA +I M P
Sbjct: 598 ACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMA----P 653
Query: 310 G-----VWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAK 364
G W +L +C+LH +VKL +A E+L ELEP +A +YV+L NIY+ A WE +
Sbjct: 654 GEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTE 713
Query: 365 LRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPG 424
+R +M RG+ K CSWIE+ H F++G+++HP +++A + L RM+ GYVP
Sbjct: 714 VRGMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPESAQVHAHMDALWERMRREGYVPD 773
Query: 425 TESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISK 484
T V HDV+ EKA M+ HSE+LAIAFGL+ P G + + KNL++C+DCH A KFIS+
Sbjct: 774 TSCVLHDVDEAEKAAMLRYHSEKLAIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKFISR 833
Query: 485 ITEREITVRDVNRYHHFKDGICSCGDYW 512
+ REI +RDV R+HHF+DG CSCGDYW
Sbjct: 834 MVGREIVLRDVRRFHHFRDGTCSCGDYW 861
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 129/301 (42%), Gaps = 61/301 (20%)
Query: 13 LVHLYSACDCLHNAHQLF--DRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
L+ +Y+ + +A +LF +L WN +I G E A+++ Y ++ +G+
Sbjct: 198 LLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVR 257
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIR-NKWETDVFVGAALIDMYAKCSCVVNARQ 129
PD TF AL ACS L + GR +H V++ + + FV +AL+DMYA V +AR+
Sbjct: 258 PDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARR 317
Query: 130 VFDKILERD-------------------------------------PSEATLVTVISASA 152
VFD + E PSE T+ V+ A A
Sbjct: 318 VFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACA 377
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+HG+ + N V+ AL+DMYA+ G + A +F + + +VSWN
Sbjct: 378 RSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNT 437
Query: 213 MITGYAMHGHSTKALDLFEKMK---------------------DEVQPDHITFVGVLSAC 251
+ITG + G ++A L +M+ P++IT + +L C
Sbjct: 438 LITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGC 497
Query: 252 S 252
+
Sbjct: 498 A 498
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 140/334 (41%), Gaps = 45/334 (13%)
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYAKC-------- 121
D+F P A+K+ +AL R IH +R V AL+ YA+C
Sbjct: 47 DHFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALA 106
Query: 122 ---------------SCVVNARQVF-----------DKILERDPSEATLVTVISASADIA 155
+ +++A +F D + + + S TLV+V+ A + +A
Sbjct: 107 LFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDMLADHEVSSFTLVSVLLACSHLA 166
Query: 156 ALPQ--GRELHGFSWRHRFELNVKVK---TALVDMYAKCGLVKVARNLF--EQLREKRVV 208
GRE H F+ +H F + + AL+ MYA+ GLV A+ LF +V
Sbjct: 167 DQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLV 226
Query: 209 SWNAMITGYAMHGHSTKALD-LFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WN MI+ G +A+ L++ + V+PD +TF L ACSR L GR +
Sbjct: 227 TWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFV 286
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI-MQMRVKPDPGVWGALLNSCKLHGHVK 326
++D + + + +VD+ + ++ A + M G+W A++ HG +
Sbjct: 287 LKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMD 346
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
+ L +E E A + ++ + A E
Sbjct: 347 EEAIELFSRMEAEAGCAPSETTMAGVLPACARSE 380
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/491 (43%), Positives = 303/491 (61%), Gaps = 36/491 (7%)
Query: 58 IELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDM 117
I +Y R+L + P+ FT+P ++AC AIEEG++IH V++ + D F LI M
Sbjct: 79 IFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHM 138
Query: 118 YAKCSCVVNARQVFDKILERDPSEAT---------------------------------- 143
Y + AR+VFD + +RD + +
Sbjct: 139 YVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKF 198
Query: 144 -LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
+++SA + AL QG+ +HG+ + EL+ K+ T ++DMY KCG ++ A +F +L
Sbjct: 199 VAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNEL 258
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR 261
+K + SWN MI G AMHG A++LF++M+ E V PD ITFV VLSAC+ GL +EG+
Sbjct: 259 PQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGK 318
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
+F+ M + P ++H+ CMVDLLG +G L+EA LI +M V PD GV GAL+ +C++
Sbjct: 319 HYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRI 378
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
HG+ +L E +K+IELEPH++G YV+L+N+YA A WE VAK+RKLM DRG+KK+ S
Sbjct: 379 HGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFS 438
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMI 441
IE ++ F++G +HP EIYAKL + ++ GYVP T+ V HD++ +EK N +
Sbjct: 439 MIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPL 498
Query: 442 CCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF 501
HSE+LAIAFGL+ T G L I+KNL+IC DCH A K ISK+ +REI +RD NR+HHF
Sbjct: 499 YYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHF 558
Query: 502 KDGICSCGDYW 512
+ G CSC DYW
Sbjct: 559 RMGGCSCKDYW 569
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G LAT ++ +Y C CL A ++F+ +PQ+ + WN +I A +G E AIEL+
Sbjct: 227 GIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELF 286
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHE---DVIRNKWETDVFVGAALIDMY 118
+ + PD TF L AC+ +EEG+ + +V+ K + F ++D+
Sbjct: 287 KEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHF--GCMVDLL 344
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISA 150
+ + AR++ ++ + +P L ++ A
Sbjct: 345 GRAGLLEEARKLINE-MPVNPDAGVLGALVGA 375
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/538 (38%), Positives = 324/538 (60%), Gaps = 38/538 (7%)
Query: 13 LVHLYSACDC---LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPY-EVAIELYYRLLEIG 68
L+++Y+ C + A ++FD+I N+F W +I Y G Y E A++L+ ++
Sbjct: 312 LINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTH 371
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
++P++FTF LKAC+ L+A+ G ++ ++ + + V +LI MYA+ + +AR
Sbjct: 372 VIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDAR 431
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+ FD + E++ S T +++S +A I
Sbjct: 432 KAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIG 491
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+ +G ++H + +LN V AL+ MY++CG ++ A +FE + ++ V+SW ++IT
Sbjct: 492 TIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIIT 551
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+A HG +T+AL+LF KM +E V+P+ +T++ VLSACS GL +EG F+SM ++ +
Sbjct: 552 GFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVI 611
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY C+VD+LG SG L EA I M K D VW L +C++HG+++L + A +
Sbjct: 612 PRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKM 671
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
+IE EPHD Y++LSN+YA + W+ V+ +RK M ++ + K CSW+EV+NK H F
Sbjct: 672 IIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYV 731
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD SHP EIY +L+ L ++K+ GYVP + V HDVE ++K ++ HSE++A+AFGL
Sbjct: 732 GDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGL 791
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I+T + + KNL+IC DCH AIK+IS T REI VRD NR+HH KDG CSC +YW
Sbjct: 792 ISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 152/334 (45%), Gaps = 50/334 (14%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRI-PQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
V L+ LYS C A +F + R+L W+ ++ +A N A+ + ++E
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAKCSC-V 124
G P+ + F A +ACS + G I VI+ + ++DV VG LIDM+ K +
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDL 221
Query: 125 VNARQVFDKILER---------------------------------DPSEATLVTVISAS 151
V+A +VF+K+ ER +P TL VISA
Sbjct: 222 VSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISAC 281
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC---GLVKVARNLFEQLREKRVV 208
A++ L G++LH + RH L+ V L++MYAKC G + AR +F+Q+ + V
Sbjct: 282 ANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVF 341
Query: 209 SWNAMITGYAMH-GHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
SW AMITGY G+ +ALDLF M V P+H TF L AC+ G F
Sbjct: 342 SWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTH 401
Query: 267 MVRDYHIDPSVQHYTC----MVDLLGHSGRLDEA 296
V+ C ++ + SGR+D+A
Sbjct: 402 AVK-----LGFSSVNCVANSLISMYARSGRIDDA 430
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 151/400 (37%), Gaps = 77/400 (19%)
Query: 51 NGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFV 110
NG AI ++ G PD T+ LK C + + G +HE + ++ + D
Sbjct: 44 NGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVT 103
Query: 111 GAALIDMYAKC--------------------------SCVVNARQVFDKILE-------- 136
+LI +Y+KC SC N F +L
Sbjct: 104 LNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENG 163
Query: 137 RDPSEATLVTVISASADIAALPQGRELHGFSWRHRF-ELNVKVKTALVDMYAKC-GLVKV 194
P+E A + + G + GF + + + +V V L+DM+ K G +
Sbjct: 164 YYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVS 223
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSR 253
A +FE++ E+ V+W MIT G++ +A+DLF M +PD T GV+SAC+
Sbjct: 224 AFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACAN 283
Query: 254 GGLFDEGRMFFESMVR---------------------------------DYHIDPSVQHY 280
L G+ +R D +D +V +
Sbjct: 284 MELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSW 343
Query: 281 TCMVDLLGHSGRLD-EACDLIMQM---RVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
T M+ G D EA DL M V P+ + + L +C +++ E +
Sbjct: 344 TAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAV 403
Query: 337 ELEPHDAGNYVI--LSNIYARAANWEGVAKLRKLMIDRGI 374
+L + N V L ++YAR+ + K ++ ++ +
Sbjct: 404 KL-GFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNL 442
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/545 (36%), Positives = 325/545 (59%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ + L+++Y+ C L + ++F + ++ WN +I Y NG ++ A++L+
Sbjct: 405 GYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF 464
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++++ + PD+ T+ L + L + G+ +H D+ + + +++ V L+DMYAKC
Sbjct: 465 -KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKC 523
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ ++ +VF+ + RD P AT+++++
Sbjct: 524 GEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSIL 583
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+ +AA QG+E+HG ++ E +V V L++MY+KCG ++ + +F+ ++ K VV
Sbjct: 584 PVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVV 643
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W A+I+ M+G KA+ F +M+ + PDH+ FV ++ ACS GL +EG +F M
Sbjct: 644 TWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRM 703
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+DY I+P ++HY C+VDLL S LD+A D I+ M +KPD +WGALL++C++ G ++
Sbjct: 704 KKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEI 763
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
A+ E++IEL P D G YV++SN+YA W+ V +RK + RG+KK CSW+E++N
Sbjct: 764 AQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQN 823
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K + F +G +E+ L L G M + GY+ + V HD++ DEK +++C HSER
Sbjct: 824 KVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSER 883
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGL+NT GT L + KNL++C+DCH K+ISKI +RE+ VRD NR+H FKDG CS
Sbjct: 884 LAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIXQRELLVRDANRFHVFKDGACS 943
Query: 508 CGDYW 512
CGDYW
Sbjct: 944 CGDYW 948
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 174/351 (49%), Gaps = 34/351 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MGFG + L+ +Y + L A ++F+ +P R++ WN LI Y NG + A+E+
Sbjct: 203 MGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEI 262
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
YYR +G+VPD++T L+AC L ++EEG IH + + + DV V L+ MY K
Sbjct: 263 YYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCK 322
Query: 121 CSCVVNARQVFDKILERD--------------------------------PSEATLVTVI 148
+ +++ R++FDK++ RD P T+ +++
Sbjct: 323 FNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSIL 382
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A + L G+ +H + +E + L++MYAKCG + ++ +F ++ K V
Sbjct: 383 QACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSV 442
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
SWN+MI Y +G +A+ LF+ MK +V+PD +T+V +LS ++ G G+ +
Sbjct: 443 SWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLA 502
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC 319
+ + ++ +VD+ G + ++ + M+ + D W ++ SC
Sbjct: 503 K-MGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR-DIITWNTIIASC 551
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 169/351 (48%), Gaps = 39/351 (11%)
Query: 34 PQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
P N++ WN +IRA NG + A+ LY I L PD +TFP + AC+ L E +
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 194
Query: 94 RIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD--------------- 138
IH+ V+ + +D+++G ALIDMY + + + AR+VF+++ RD
Sbjct: 195 SIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 254
Query: 139 ------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
P T+ +V+ A + ++ +G +HG + + +V V
Sbjct: 255 YWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNN 314
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPD 240
L+ MY K + R +F+++ + VSWN MI GY+ G +++ LF +M ++ +PD
Sbjct: 315 GLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKPD 374
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
+T +L AC G + G+ + M+ Y D + + ++++ G L + ++
Sbjct: 375 LLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASN--ILINMYAKCGNLLASQEV 432
Query: 300 IMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPH-DAGNYVIL 349
M+ K D W +++N +G A + L K+++ + D+ YV+L
Sbjct: 433 FSGMKCK-DSVSWNSMINVYIQNGSFDEA-MKLFKMMKTDVKPDSVTYVML 481
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/515 (40%), Positives = 311/515 (60%), Gaps = 5/515 (0%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + LV +Y C CL A ++ D++P R++ WN ++ YA +G ++ A+E+
Sbjct: 166 VGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEI 225
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + L D T +L +++E + IH ++ + ++ +I +Y
Sbjct: 226 CKEMDSLNLNHDAGTMA-SLSPVVCYTSLENVQYIH-NMFERMTKKNLISWNVMIAIYVN 283
Query: 121 CSCVVNARQVFDKILE--RDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
S A +F ++ E P T+ +++ A D++AL GR LH + + + N+ +
Sbjct: 284 NSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLL 343
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ 238
+ AL+DMYAKCG ++ AR++F+++R + VVSW +M++ Y G A+ LF KM D Q
Sbjct: 344 ENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQ 403
Query: 239 -PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
PD I FV VLSACS GL D+GR +F M Y I P ++H+ CMVDL G +G ++EA
Sbjct: 404 NPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAY 463
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAA 357
I QM ++P+ VWGALL++C++H + + +A + L +L P +G YV+LSNIYA+A
Sbjct: 464 SFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAG 523
Query: 358 NWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK 417
W+ V +R M GIKK S +E+ + H FL+GD HP IY +L L G+MK
Sbjct: 524 MWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMK 583
Query: 418 EAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHI 477
E GY+P TES HDVE ++K + HSE+LAI F ++NT GT + ITKNL++C DCHI
Sbjct: 584 ELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHI 643
Query: 478 AIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
AIK ISKI R I VRD NR+HHF +GICSCGDYW
Sbjct: 644 AIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 169/315 (53%), Gaps = 7/315 (2%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P LA KL+ YSA A +FDR ++N+ +NV+IR+Y N Y A+ ++ +L
Sbjct: 71 PTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLS 130
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
PD++TFP LKACS L + G ++H+ +++ +T++F+G AL+ MY KC C+
Sbjct: 131 CAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLRE 190
Query: 127 ARQVFDKILERD-PSEATLVTVISASADI-AALPQGRELHGFSWRHRFELNVKVKTALVD 184
AR+V D++ RD S ++V + S AL +E+ + H + + V
Sbjct: 191 ARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNH--DAGTMASLSPVV 248
Query: 185 MYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHIT 243
Y V+ N+FE++ +K ++SWN MI Y + +A+ LF +M++ ++PD +T
Sbjct: 249 CYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVT 308
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
+L AC GR + + + ++ P++ ++D+ G L+EA D+ +M
Sbjct: 309 IASLLPACGDLSALFLGRRLHKYIEKG-NLQPNLLLENALLDMYAKCGCLEEARDVFDKM 367
Query: 304 RVKPDPGVWGALLNS 318
R++ D W +++++
Sbjct: 368 RLR-DVVSWTSMMSA 381
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/545 (38%), Positives = 315/545 (57%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G ++T L+ +YS + A LF +L WN ++ Y +G + A+ LY
Sbjct: 1038 GVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLY 1097
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ E G + T A KA L +++G++I V++ + D+FV + ++DMY KC
Sbjct: 1098 ILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKC 1157
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +AR++F++I D P E T T++
Sbjct: 1158 GEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLV 1217
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A + + AL QGR++H + + + V T+LVDMYAKCG ++ AR LF++ R+
Sbjct: 1218 KACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIA 1277
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNAMI G A HG++ +AL FE+MK V PD +TF+GVLSACS GL E F SM
Sbjct: 1278 SWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSM 1337
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ Y I+P ++HY+C+VD L +GR+ EA +I M + ++ LLN+C++ +
Sbjct: 1338 QKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRET 1397
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
+ EKL+ LEP D+ YV+LSN+YA A WE VA R +M +KK SW+++KN
Sbjct: 1398 GKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKN 1457
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K H F++GD SH D IY K++++ R++E GY+P T+ DVE ++K + HSE+
Sbjct: 1458 KVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYLPDTDFALVDVEEEDKECSLYYHSEK 1517
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIA+GL+ TP T L + KNL++C DCH AIK+ISK+ ERE+ +RD NR+HHF+ G+CS
Sbjct: 1518 LAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISKVFEREVVLRDANRFHHFRSGVCS 1577
Query: 508 CGDYW 512
CGDYW
Sbjct: 1578 CGDYW 1582
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 185/404 (45%), Gaps = 49/404 (12%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + +A LV++Y+ + A LFD + R++ LWNV+++AY G A+ L
Sbjct: 756 IGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLL 815
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN--KWETDVFV------GA 112
+ GL PD+ T C+ ++ + + E ++ + T +F+ G+
Sbjct: 816 FSEFNRTGLRPDDVTL------CTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGS 869
Query: 113 ALI-------------DMYAKCSC---VVNARQVFDKILERDPSEATLVTVISASADIAA 156
+I + + C ++N+R D + T V ++S A +
Sbjct: 870 DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGL--------TFVVMLSVVAGLNC 921
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
L G+++HG R + V V L++MY K G V AR +F Q+ E +VSWN MI+G
Sbjct: 922 LELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISG 981
Query: 217 YAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSR--GGLFDEGRMFFESMVRDYHI 273
A+ G ++ +F + ++ + PD T VL ACS GG ++ +M +
Sbjct: 982 CALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVL 1041
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
D V T ++D+ SG+++EA + + + D W A+++ + G A L L
Sbjct: 1042 DSFVS--TTLIDVYSKSGKMEEA-EFLFVNQDGFDLASWNAMMHGYIVSGDFPKA-LRLY 1097
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGV---AKLRKLMIDRGI 374
L++ E + N + L+N A G+ +++ +++ RG
Sbjct: 1098 ILMQ-ESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGF 1140
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 145/344 (42%), Gaps = 37/344 (10%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEVAIE 59
G HP L L+ +YS C L +A +LFD P R+L WN ++ A+A +
Sbjct: 656 GHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKARDGFHL- 714
Query: 60 LYYRLLEIGLVP-DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
+RLL V T K C ++ +H ++ + DVFV AL+++Y
Sbjct: 715 --FRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIY 772
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
AK + AR +FD + RD L V+ A + G E F +
Sbjct: 773 AKFGRIREARVLFDGMGLRD---VVLWNVMMK----AYVDTGLEYEALLLFSEFN-RTGL 824
Query: 179 KTALVDMYAKCGLVKVARNLFE-QLREKR-----------------VVSWNAMITGYAMH 220
+ V + +VK +N+ E QL++ + V++WN ++ +
Sbjct: 825 RPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQR 884
Query: 221 GHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQH 279
G + +A+D F M V D +TFV +LS + + G+ +VR +D V
Sbjct: 885 GETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRS-GLDQVVSV 943
Query: 280 YTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
C++++ +G + A + QM + D W +++ C L G
Sbjct: 944 GNCLINMYVKTGSVSRARTVFWQMN-EVDLVSWNTMISGCALSG 986
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 37/209 (17%)
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
+P F+ L+ A S + G+R H ++ + D F+ LI MY+KC + +AR+
Sbjct: 626 IPQWFSI---LRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARK 682
Query: 130 VFDKILERDPSEATLVTVISASAD--------------------------------IAAL 157
+FD + T ++SA AD ++A
Sbjct: 683 LFDTTPDTSRDLVTWNAILSAHADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSAS 742
Query: 158 PQGRE-LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
P E LHG++ + + +V V ALV++YAK G ++ AR LF+ + + VV WN M+
Sbjct: 743 PSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKA 802
Query: 217 YAMHGHSTKALDLFEKM-KDEVQPDHITF 244
Y G +AL LF + + ++PD +T
Sbjct: 803 YVDTGLEYEALLLFSEFNRTGLRPDDVTL 831
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/536 (39%), Positives = 312/536 (58%), Gaps = 34/536 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
+ L+H+Y++C + A LFD + + + +WN +I AY NG + +E++ +LE+G+
Sbjct: 158 SSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVA 217
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
D T + AC + + G+ + E V + + ALIDMYAKC + AR++
Sbjct: 218 FDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRL 277
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
FD + RD P++ T+V+V+SA A + AL
Sbjct: 278 FDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGAL 337
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
G+ +H + R R L + + TALVD YAKCG + A FE + K +W A+I G
Sbjct: 338 ETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGM 397
Query: 218 AMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
A +G +AL+LF M K ++P +TF+GVL ACS L +EGR F+SM +DY I P
Sbjct: 398 ATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPR 457
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
+HY C+VDLLG +G +DEA I M ++P+ +W ALL+SC +H +V++ E AL++++
Sbjct: 458 AEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIV 517
Query: 337 ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGD 396
L P +G+Y++LSNIYA W+ A +RK M DRGI+K+ CS IE+ F + D
Sbjct: 518 SLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVEFFAED 577
Query: 397 ASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLIN 456
+ HP EIY K++ + R+K AGY+P T V +V+ EK + HSE+LAIAFGL+
Sbjct: 578 SDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEKEVSVSHHSEKLAIAFGLMK 637
Query: 457 TPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
G + ++KNL++C DCH A K ISK+ REI VRD NR+HHFKDG CSC DYW
Sbjct: 638 LDPGATIRLSKNLRVCTDCHSATKLISKVYNREIVVRDRNRFHHFKDGTCSCNDYW 693
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 173/379 (45%), Gaps = 39/379 (10%)
Query: 34 PQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV-PDNFTFPFALKACSALSAIEEG 92
P + +NVL+RA G E A+ L+ +L++ V PD T ALK+CS + ++ G
Sbjct: 79 PPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVG 138
Query: 93 RRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP------------- 139
R I ++ D FV ++LI MYA C V A+ +FD + E
Sbjct: 139 RGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKN 198
Query: 140 --------------------SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
E TLV+V++A I G+ + + N +
Sbjct: 199 GNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLM 258
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQ 238
TAL+DMYAKCG + AR LF+ ++ + VV+W+AMI+GY +AL LF +M+ EV+
Sbjct: 259 TALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVE 318
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
P+ +T V VLSAC+ G + G+ + S +R + ++ T +VD G +D+A +
Sbjct: 319 PNDVTMVSVLSACAVLGALETGK-WVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVE 377
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVK--LAELALEKLIELEPHDAGNYVILSNIYARA 356
M VK + W AL+ +G + L + + +EP D +L
Sbjct: 378 AFESMPVK-NSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSC 436
Query: 357 ANWEGVAKLRKLMIDRGIK 375
EG + D GIK
Sbjct: 437 LVEEGRRHFDSMTQDYGIK 455
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+L T LV Y+ C C+ +A + F+ +P +N + W LI+ A NG A+EL+ + +
Sbjct: 357 ILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKA 416
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRR 94
+ P + TF L ACS +EEGRR
Sbjct: 417 SIEPTDVTFIGVLMACSHSCLVEEGRR 443
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/550 (37%), Positives = 327/550 (59%), Gaps = 38/550 (6%)
Query: 1 MGFGFHPVLATKLVHLYSAC---DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV- 56
+G + LV +Y+ C + ++ ++F+++P+ N+ W +I AYA +G +
Sbjct: 85 LGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKE 144
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
AIEL+ +++ + P++F+F LKAC LS G +++ ++ + VG +LI
Sbjct: 145 AIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLIS 204
Query: 117 MYAKCSCVVNARQVFDKILERD---------------------------------PSEAT 143
MYA+ + +AR+ FD + E++ S T
Sbjct: 205 MYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFT 264
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
+++S +A I A+ +G ++HG + ++ N + AL+ MY++CG ++ A +F ++
Sbjct: 265 FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME 324
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRM 262
++ V+SW +MITG+A HG +T+AL++F KM + +P+ IT+V VLSACS G+ EG+
Sbjct: 325 DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK 384
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
F SM +++ I P ++HY CMVDLLG SG L EA + I M + D VW LL +C++H
Sbjct: 385 HFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVH 444
Query: 323 GHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSW 382
G+ +L A E ++E EP D Y++LSN++A A W+ V K+RK M +R + K CSW
Sbjct: 445 GNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSW 504
Query: 383 IEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMIC 442
IEV+N+ H F G+ SHP +IY +L L ++KE GY+P T+ V HD+E ++K +
Sbjct: 505 IEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLF 564
Query: 443 CHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFK 502
HSE++A+AFGLI+T + I KNL++C DCH AIK+IS T REI VRD NR+HH K
Sbjct: 565 QHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIK 624
Query: 503 DGICSCGDYW 512
+G+CSC DYW
Sbjct: 625 NGVCSCNDYW 634
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 180/390 (46%), Gaps = 44/390 (11%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A+++FD++P+RNL W ++I +A G AI+L+ + G VPD FT+ L AC+
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC---VVNARQVFDKILERD---- 138
L + G+++H VIR DV VG +L+DMYAKC+ V ++R+VF+++ E +
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 139 ------------------------------PSEATLVTVISASADIAALPQGRELHGFSW 168
P+ + +V+ A +++ G +++ ++
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188
Query: 169 RHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALD 228
+ V +L+ MYA+ G ++ AR F+ L EK +VS+NA++ GYA + S +A
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 248
Query: 229 LFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDL 286
LF ++ D + TF +LS + G +G +++ Y + + ++ +
Sbjct: 249 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI--CNALISM 306
Query: 287 LGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHDAG 344
G ++ A + +M + + W +++ HG A K++E +P++
Sbjct: 307 YSRCGNIEAAFQVFNEMEDR-NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEIT 365
Query: 345 NYVILSNIYARAANWEGVAKLRKLMIDRGI 374
+LS EG + + GI
Sbjct: 366 YVAVLSACSHVGMISEGQKHFNSMYKEHGI 395
>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/549 (39%), Positives = 323/549 (58%), Gaps = 38/549 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G P+L+ L++ YS +++ Q+F P ++ W+ +I ++A N +++
Sbjct: 49 LGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQNDLPLLSLNY 108
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ +L G+ PD+ FP A K+C LS++ + +H ++ + D+FVG+++IDMYAK
Sbjct: 109 FRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAK 168
Query: 121 CSCVVNARQVFDKILERDP-----------------------------------SEATLV 145
C + A VFD++ R+ ++ TL
Sbjct: 169 CGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLS 228
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+V+ L GR +HG S++ F+ + V ++L+ +Y+KCG+V+ A ++FE++ +
Sbjct: 229 SVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVR 288
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKD--EVQPDHITFVGVLSACSRGGLFDEGRMF 263
+ WNAM+ A H H+ K +LF+KMK ++ + ITF+ VL ACS GL ++G+ +
Sbjct: 289 NLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYY 348
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
FE +++DY I+P QHY+ MVDLLG +G+L++A LI +M ++P VWGALL C+LHG
Sbjct: 349 FE-LMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHG 407
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
+ KLA +++ EL +G +V+LSN YA A WE AK RK+M DRGIKK SW+
Sbjct: 408 NTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMMRDRGIKKETGLSWV 467
Query: 384 EVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICC 443
E N+ H F +GD SH EIY KL L M +AGYV T V +V+ +EK+ I
Sbjct: 468 EEGNRIHTFAAGDRSHAKSVEIYDKLDELGEEMDKAGYVADTSFVLKEVDGEEKSRSIRY 527
Query: 444 HSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKD 503
HSERLAIAFG I P G + + KNL++C DCH AIKFISK T R I VRD NR+H F+D
Sbjct: 528 HSERLAIAFGFITFPHGQPIRVMKNLRVCGDCHTAIKFISKCTGRVIIVRDNNRFHRFED 587
Query: 504 GICSCGDYW 512
G C+CGDYW
Sbjct: 588 GKCTCGDYW 596
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 99/233 (42%), Gaps = 16/233 (6%)
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+LP+G +LH + + + L++ Y+K L + +F K +W+++I+
Sbjct: 35 SLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVIS 94
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFF-ESMVRDYHI 273
+A + +L+ F M + V PD F +C +M ++ YH+
Sbjct: 95 SFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHL 154
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE---- 329
D V + ++D+ G + A ++ +M + + W L ++G+V+L E
Sbjct: 155 DIFVG--SSVIDMYAKCGDICYAHNVFDEMPYR-NVVSWSGL-----IYGYVQLGEDDES 206
Query: 330 LALEKLIELEPHDAG-NYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
L L K +E + G N LS++ R + ++ +L+ K S S
Sbjct: 207 LRLFKRFLVEEENEGVNDFTLSSVL-RVCGGSTLLQMGRLIHGLSFKTSFDSS 258
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/545 (40%), Positives = 323/545 (59%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + LV LY+ C + A +FD + R + W +I YA NG A+ ++
Sbjct: 184 GFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMF 243
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ G+ PD L+A + + +E+GR IH VI+ E + + +L YAKC
Sbjct: 244 SQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKC 303
Query: 122 SCVVNARQVFDKI-------------------------------LERD--PSEATLVTVI 148
V A+ FD++ + R+ P T+ + +
Sbjct: 304 GLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAV 363
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
ASA + +L + + + + + ++ V T+L+DMYAKCG V+ AR +F++ +K VV
Sbjct: 364 LASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVV 423
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
W+AMI GY +HG +A++L+ MK V P+ +TF+G+L+AC+ GL EG F M
Sbjct: 424 MWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM 483
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+D+ I P +HY+C+VDLLG +G L EAC IM++ ++P VWGALL++CK++ V L
Sbjct: 484 -KDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTL 542
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E A KL L+P++ G+YV LSN+YA + W+ VA +R LM ++G+ K + S IE+
Sbjct: 543 GEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEING 602
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K AF GD SHP EI+ +L+ LE R+KE G+VP TESV HD+ +EK + HSER
Sbjct: 603 KLQAFHVGDKSHPMAKEIFDELQRLERRLKEVGFVPYTESVLHDLNYEEKEENLSFHSER 662
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
+A+A+GLI+T GT L ITKNL+ C +CH AIK ISK+ EREI VRD NR+HHFKDG+CS
Sbjct: 663 IAVAYGLISTAPGTTLRITKNLRACVNCHSAIKLISKLVEREIIVRDANRFHHFKDGLCS 722
Query: 508 CGDYW 512
CGDYW
Sbjct: 723 CGDYW 727
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 172/358 (48%), Gaps = 38/358 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + L TKLV+ S + A +LFD ++F+WN +IR+Y+ N Y +E+Y
Sbjct: 83 GLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMY 142
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ PD FTFP+ LKAC+ L IH +I+ + +DVFV L+ +YAKC
Sbjct: 143 RWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKC 202
Query: 122 SCVVNARQVFDKILER---------------------------------DPSEATLVTVI 148
+ A+ VFD + R P LV+++
Sbjct: 203 GHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSIL 262
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A D+ L QGR +HGF + E + +L YAKCGLV VA++ F+Q++ V+
Sbjct: 263 RAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVI 322
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITF-VGVLSACSRGGLFDEGRMFFES 266
WNAMI+GYA +GH+ +A++LF M ++PD +T VL++ G L E + +
Sbjct: 323 MWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSL--ELAQWMDD 380
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
V + + T ++D+ G ++ A + D +W A++ LHG
Sbjct: 381 YVSKSNYGSDIFVNTSLIDMYAKCGSVEFA-RRVFDRNSDKDVVMWSAMIMGYGLHGQ 437
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/555 (39%), Positives = 323/555 (58%), Gaps = 65/555 (11%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L+ A ++FD+IP + +++N + R Y I +Y R+L + P+ FT+P ++A
Sbjct: 70 LNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRA 129
Query: 83 CSALSAIEEGRRIHEDVIR-------------------------------NKWETDVFVG 111
C AIEEG++IH V++ N + DV
Sbjct: 130 CCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSW 189
Query: 112 AALIDMYAKCSCVVNARQVFDKILERDP-------------------------------- 139
+LI Y++ V AR+VF+ + ER+
Sbjct: 190 TSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVV 249
Query: 140 -SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
+ +++SA + AL QG+ +HG+ + EL+ K+ T ++DMY KCG ++ A +
Sbjct: 250 LDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEV 309
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLF 257
F +L +K + SWN MI G AMHG A++LF++M+ E V PD ITFV VLSAC+ GL
Sbjct: 310 FNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLV 369
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
+EG+ +F+ M + P ++H+ CMVDLLG +G L+EA LI +M V PD GV GAL+
Sbjct: 370 EEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVG 429
Query: 318 SCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKS 377
+C++HG+ +L E +K+IELEPH++G YV+L+N+YA A WE VAK+RKLM DRG+KK+
Sbjct: 430 ACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKA 489
Query: 378 IACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEK 437
S IE ++ F++G +HP EIYAKL + ++ GYVP T+ V HD++ +EK
Sbjct: 490 PGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEK 549
Query: 438 ANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNR 497
N + HSE+LAIAFGL+ T G L I+KNL+IC DCH A K ISK+ +REI +RD NR
Sbjct: 550 ENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNR 609
Query: 498 YHHFKDGICSCGDYW 512
+HHF+ G CSC DYW
Sbjct: 610 FHHFRMGGCSCKDYW 624
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G LAT ++ +Y C CL A ++F+ +PQ+ + WN +I A +G E AIEL+
Sbjct: 282 GIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELF 341
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHE---DVIRNKWETDVFVGAALIDMY 118
+ + PD TF L AC+ +EEG+ + +V+ K + F ++D+
Sbjct: 342 KEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHF--GCMVDLL 399
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISA 150
+ + AR++ ++ + +P L ++ A
Sbjct: 400 GRAGLLEEARKLINE-MPVNPDAGVLGALVGA 430
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/574 (40%), Positives = 315/574 (54%), Gaps = 71/574 (12%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
+PVL KL Y++ + ++ LF + +LFL+ I + NG + A LY +LL
Sbjct: 63 YPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLL 122
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
+ P+ FTF LK+CS S G+ IH V++ D +V L+D+YAK VV
Sbjct: 123 SSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVV 178
Query: 126 NARQV-------------------------------FDKILERD---------------- 138
+A++V FD + ERD
Sbjct: 179 SAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGF 238
Query: 139 ------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
P E T+V +SA + I AL GR +H F R LNVKV T
Sbjct: 239 PNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCT 298
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK--DEVQ 238
L+DMY+KCG ++ A +F K +V+WNAMI GYAMHG+S AL LF +M+ +Q
Sbjct: 299 GLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQ 358
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
P ITF+G L AC+ GL +EG FESM ++Y I P ++HY C+V LLG +G+L A +
Sbjct: 359 PTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYE 418
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN 358
I M + D +W ++L SCKLHG L + E LI L ++G YV+LSNIYA +
Sbjct: 419 TIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGD 478
Query: 359 WEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKE 418
+EGVAK+R LM ++GI K S IE++NK H F +GD H EIY L+ + R+K
Sbjct: 479 YEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKS 538
Query: 419 AGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIA 478
GYVP T +V D+E EK + HSERLAIA+GLI+T G+ L I KNL++C DCH
Sbjct: 539 HGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTV 598
Query: 479 IKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
K ISKIT R+I +RD NR+HHF DG CSCGD+W
Sbjct: 599 TKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/536 (39%), Positives = 316/536 (58%), Gaps = 35/536 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
+ L+HLY+ + +A ++FDR+P+R+ W+ ++ + G AI++Y R+ E G+
Sbjct: 147 SSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVK 206
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
D ++AC+A + G +H ++R+ DV +L+DMYAK + A +V
Sbjct: 207 GDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRV 266
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F ++ R+ P LV+ + A ++I L
Sbjct: 267 FGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFL 326
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
GR +HGF R RF+ N + TA +DMY+KCG + A+ LF + ++ ++ WNAMI
Sbjct: 327 KLGRSVHGFIVR-RFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACC 385
Query: 218 AMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
HG AL LF++M + ++PDH TF +LSA S GL +EG+++F MV + I P+
Sbjct: 386 GAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPA 445
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
+HY C+VDLL SG ++EA DL+ M+ +P +W ALL+ C + ++L E + ++
Sbjct: 446 EKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNIL 505
Query: 337 ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGD 396
EL+P D G ++SN+YA W+ V ++RKLM D G KK CS IE++ HAFL D
Sbjct: 506 ELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAFLMED 565
Query: 397 ASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLIN 456
SHP +EI +K+ L+ M++ GY+P TE V+HD+E + K + HSE+LAIAFGL+N
Sbjct: 566 QSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAFGLLN 625
Query: 457 TPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
T GTRL+I KNL++C DCH AIK+ISKI +REI VRD R+HHFKDG+CSC DYW
Sbjct: 626 TGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 148/327 (45%), Gaps = 39/327 (11%)
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+R L PD+ TF AL AC+ L + G + + ++ DVFV ++L+ +YA+
Sbjct: 97 FRALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARW 156
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +A +VFD++ RD E ++ VI
Sbjct: 157 GAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVI 216
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A + G +HG RH ++V T+LVDMYAK GL+ VA +F + + V
Sbjct: 217 QACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDV 276
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SW+AMI+G+A +G S +AL LF M+ +QPD V L ACS G GR +
Sbjct: 277 SWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFI 336
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
VR + + + T +D+ G L A ++ M D +W A++ C HG +
Sbjct: 337 VRRFDFNCILG--TAAIDMYSKCGSLASA-QMLFNMISDRDLILWNAMIACCGAHGRGQD 393
Query: 328 AELALEKLIE--LEPHDAGNYVILSNI 352
A +++ E + P A +LS +
Sbjct: 394 ALTLFQEMNETGMRPDHATFASLLSAL 420
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 136/287 (47%), Gaps = 45/287 (15%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G V AT LV +Y+ L A ++F + RN W+ +I +A NG + A+ L+
Sbjct: 239 GMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLF 298
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ PD+ AL ACS + ++ GR +H ++R +++ + +G A IDMY+KC
Sbjct: 299 RNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR-RFDFNCILGTAAIDMYSKC 357
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +A+ +F+ I +RD P AT +++
Sbjct: 358 GSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLL 417
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVK--TALVDMYAKCGLVKVARNLFEQLR-EK 205
SA + + +G+ G H F++ K LVD+ A+ GLV+ A +L ++ E
Sbjct: 418 SALSHSGLVEEGKLWFGCMVNH-FKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEP 476
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKD---EVQPDHITFVGVLS 249
V W A+++G + K L+L E + D E+QPD + + ++S
Sbjct: 477 TVAIWVALLSGCL----NNKKLELGESIADNILELQPDDVGVLALVS 519
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/523 (41%), Positives = 317/523 (60%), Gaps = 37/523 (7%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYA-WNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
A LF+ + + ++ ++N + R Y+ + P EV L+ +LE G++PDN+TFP LKAC+
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEV-FSLFVEILEDGILPDNYTFPSLLKACA 140
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER------- 137
A+EEGR++H ++ + +V+V LI+MY +C V +AR VFD+I+E
Sbjct: 141 VAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNA 200
Query: 138 --------------------------DPSEATLVTVISASADIAALPQGRELHGFSWRHR 171
P+E TL++V+S+ A + +L G+ +H ++ +H
Sbjct: 201 MITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHS 260
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
F VKV TAL+DM+AKCG + A ++FE++R K +W+AMI YA HG + K++ +FE
Sbjct: 261 FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFE 320
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+M+ E VQPD ITF+G+L+ACS G +EGR +F MV + I PS++HY MVDLL +
Sbjct: 321 RMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXA 380
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
G L++A + I ++ + P P +W LL +C H ++ LAE E++ EL+ G+YVILS
Sbjct: 381 GNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILS 440
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
N+YAR WE V LRK+M DR K CS IEV N H F SGD +++ L
Sbjct: 441 NLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALD 500
Query: 411 WLEGRMKEAGYVPGTESVFHDVEND-EKANMICCHSERLAIAFGLINTPDGTRLLITKNL 469
+ +K +GYVP T V H ND EK + HSE+LAI FGL+NTP GT + + KNL
Sbjct: 501 EMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNL 560
Query: 470 KICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++C DCH A K IS I R++ RDV R+HHF+DG CSCGD+W
Sbjct: 561 RVCRDCHNAAKLISLIFGRKVVXRDVQRFHHFEDGKCSCGDFW 603
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/556 (41%), Positives = 326/556 (58%), Gaps = 46/556 (8%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPY-EVAIEL 60
G FH ++++ L S+ +A +F+ IP +FL+N LI + A P+ +A L
Sbjct: 36 GLIFHTYPLSRIL-LISSTIVFTHALSIFNHIPNPTIFLYNTLISSLANIKPHTHIAFSL 94
Query: 61 YYRLL-EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWET-DVFVGAALIDMY 118
Y R+L L P+ FTFP KAC + + GR +H V++ T D FV AAL++ Y
Sbjct: 95 YSRVLTHTTLKPNGFTFPSLFKACGSQPWLRHGRALHTHVLKFLEPTCDPFVQAALLNYY 154
Query: 119 AKCSCVVNARQVFDKILERD---------------------------------------- 138
AKC V R +F++I + D
Sbjct: 155 AKCGKVGACRYLFNQISKPDLASWNSILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLI 214
Query: 139 -PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
+E TLV +ISA A++ AL QG H + +H +LN V TAL+DMY+KCG + +A
Sbjct: 215 KANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQ 274
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGL 256
LF+QL + + +NAMI G+A+HG+ +ALDLF+KM E + PD +T V + +CS GL
Sbjct: 275 LFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGL 334
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
+EG FESM Y ++P ++HY C+VDLLG +GRL EA + ++ M +KP+ +W +LL
Sbjct: 335 VEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKPNAVIWRSLL 394
Query: 317 NSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKK 376
+ ++HG++++ E+ L+ LI+LEP +GNYV+LSN+YA W+ V ++RKLM D GI K
Sbjct: 395 GAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRKLMKDHGINK 454
Query: 377 SIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDE 436
S +EV H FL GD +HP EIY KL+ + R+ E G+ P T V D+E +E
Sbjct: 455 VPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRLHEYGHKPRTLEVLFDIEEEE 514
Query: 437 KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVN 496
K + + HSERLAIAF LI + + I KNL++C DCH + K ISKI EREI VRD N
Sbjct: 515 KEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCHTSSKLISKIYEREIIVRDRN 574
Query: 497 RYHHFKDGICSCGDYW 512
R+HHFK+G CSC DYW
Sbjct: 575 RFHHFKEGACSCSDYW 590
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/569 (38%), Positives = 322/569 (56%), Gaps = 69/569 (12%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-EIGLVP 71
L+ LY A F+++P R++ WN +I Y+ G A+ ++ ++L E L P
Sbjct: 214 LISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKP 273
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV------- 124
DNFT L AC+ L + G++IH ++R + ET VG ALI MYAK V
Sbjct: 274 DNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIV 333
Query: 125 -------VN-------------------ARQVFDKILERD-------------------- 138
+N AR++F+K+ +RD
Sbjct: 334 EHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDA 393
Query: 139 -------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
P+ TL ++S S+ + L G+++H + + V AL+ M
Sbjct: 394 LELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAM 453
Query: 186 YAKCGLVKVARNLFEQLR-EKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHIT 243
YAK G + VA+ +F+ +K +VSW +MI A HG +A++LFE+M ++PDHIT
Sbjct: 454 YAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHIT 513
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
+VGVLSAC+ GL ++GR ++ M + I+P++ HY CM+DL G +G L EA I M
Sbjct: 514 YVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESM 573
Query: 304 RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVA 363
++PD WG+LL SCK+H + LA++A E+L+ ++P ++G Y+ L+N+Y+ WE A
Sbjct: 574 PIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAA 633
Query: 364 KLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVP 423
+ RKLM DRG++K SWI +KN+ HAF D HP DEIY + + +K+ G++P
Sbjct: 634 QTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIP 693
Query: 424 GTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFIS 483
TESV HD+E + K ++ HSE+LAIAFGL+NTP+ T L I KNL++C+DCH AIKFIS
Sbjct: 694 DTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFIS 753
Query: 484 KITEREITVRDVNRYHHFKDGICSCGDYW 512
K+ REI VRD R+HHFKDG CSC DYW
Sbjct: 754 KLVGREIIVRDATRFHHFKDGSCSCRDYW 782
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 174/402 (43%), Gaps = 81/402 (20%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+ Y+ L AH +FD +P ++ F WN LI YA G +EV+ L Y +
Sbjct: 47 LMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEM---- 102
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
PD C +S W T + VG Y + NA
Sbjct: 103 --PD----------CDPVS----------------W-TAIIVG------YNQFGLFDNAI 127
Query: 129 QVFDKILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
+F K++ PS+ T+ V+S+ A L GR++H F + V V T+L++MY
Sbjct: 128 WMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMY 187
Query: 187 AKCG---LVKV----------------------------ARNLFEQLREKRVVSWNAMIT 215
AKCG + KV A + FE++ ++ +VSWN+MI+
Sbjct: 188 AKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMIS 247
Query: 216 GYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
GY+ G++ +AL +F KM +E ++PD+ T +LSAC+ + G+ ++R
Sbjct: 248 GYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRA-ET 306
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGHVKLAELA 331
+ S ++ + SG + E LI++ + + + +LL+ G+VK A
Sbjct: 307 ETSGAVGNALISMYAKSGGV-EIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREI 365
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRG 373
K L D + + Y + W +L +LM++ G
Sbjct: 366 FNK---LRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEG 404
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 129/314 (41%), Gaps = 45/314 (14%)
Query: 65 LEIGLVPDNFTFPFA--LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+E+G P + F FA L+ + GR +H +I+ V++ L+ YAK
Sbjct: 1 MEVGNSPTSSEF-FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTG 59
Query: 123 CVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
+ A VFD++ P ++T FSW L
Sbjct: 60 SLRFAHHVFDEM----PLKST----------------------FSW-----------NTL 82
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDH 241
+ YAK G +V+R L ++ + VSW A+I GY G A+ +F KM E V P
Sbjct: 83 ISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQ 142
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
T VLS+C+ D GR S V + V T ++++ G A +
Sbjct: 143 FTVSNVLSSCAANQTLDIGRK-IHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFD 201
Query: 302 QMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEG 361
+M VK + W AL++ G +LA EK+ + + + ++S + N E
Sbjct: 202 RMTVK-NISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNS--MISGYSQQGYNLEA 258
Query: 362 VAKLRKLMIDRGIK 375
+A K++ + +K
Sbjct: 259 LAIFSKMLNEPSLK 272
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/550 (37%), Positives = 327/550 (59%), Gaps = 38/550 (6%)
Query: 1 MGFGFHPVLATKLVHLYSAC---DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV- 56
+G + LV +Y+ C + ++ ++F+++P+ N+ W +I AYA +G +
Sbjct: 80 LGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKE 139
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
AIEL+ +++ + P++F+F LKAC LS G +++ ++ + VG +LI
Sbjct: 140 AIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLIS 199
Query: 117 MYAKCSCVVNARQVFDKILERD---------------------------------PSEAT 143
MYA+ + +AR+ FD + E++ S T
Sbjct: 200 MYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFT 259
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
+++S +A I A+ +G ++HG + ++ N + AL+ MY++CG ++ A +F ++
Sbjct: 260 FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME 319
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRM 262
++ V+SW +MITG+A HG +T+AL++F KM + +P+ IT+V VLSACS G+ EG+
Sbjct: 320 DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK 379
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
F SM +++ I P ++HY CMVDLLG SG L EA + I M + D VW LL +C++H
Sbjct: 380 HFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVH 439
Query: 323 GHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSW 382
G+ +L A E ++E EP D Y++LSN++A A W+ V K+RK M +R + K CSW
Sbjct: 440 GNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSW 499
Query: 383 IEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMIC 442
IEV+N+ H F G+ SHP +IY +L L ++KE GY+P T+ V HD+E ++K +
Sbjct: 500 IEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLF 559
Query: 443 CHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFK 502
HSE++A+AFGLI+T + I KNL++C DCH AIK+IS T REI VRD NR+HH K
Sbjct: 560 QHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIK 619
Query: 503 DGICSCGDYW 512
+G+CSC DYW
Sbjct: 620 NGVCSCNDYW 629
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 180/390 (46%), Gaps = 44/390 (11%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A+++FD++P+RNL W ++I +A G AI+L+ + G VPD FT+ L AC+
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC---VVNARQVFDKILERD---- 138
L + G+++H VIR DV VG +L+DMYAKC+ V ++R+VF+++ E +
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 139 ------------------------------PSEATLVTVISASADIAALPQGRELHGFSW 168
P+ + +V+ A +++ G +++ ++
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183
Query: 169 RHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALD 228
+ V +L+ MYA+ G ++ AR F+ L EK +VS+NA++ GYA + S +A
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 243
Query: 229 LFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDL 286
LF ++ D + TF +LS + G +G +++ Y + + ++ +
Sbjct: 244 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI--CNALISM 301
Query: 287 LGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHDAG 344
G ++ A + +M + + W +++ HG A K++E +P++
Sbjct: 302 YSRCGNIEAAFQVFNEMEDR-NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEIT 360
Query: 345 NYVILSNIYARAANWEGVAKLRKLMIDRGI 374
+LS EG + + GI
Sbjct: 361 YVAVLSACSHVGMISEGQKHFNSMYKEHGI 390
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/538 (38%), Positives = 310/538 (57%), Gaps = 34/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T L+ +Y C+ L A ++FD + + ++ W +I AY + L+ ++L G
Sbjct: 264 LCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEG 323
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P+ T +K C A+E G+ +H +RN + + + A IDMY KC V +AR
Sbjct: 324 MFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSAR 383
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
VFD +D P+E T+V+++ A
Sbjct: 384 SVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAG 443
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+L G+ +H + + + ++ +KT+ VDMYA CG + A LF + ++ + WNAMI+
Sbjct: 444 SLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMIS 503
Query: 216 GYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+AMHGH AL+LFE+M+ V P+ ITF+G L ACS GL EG+ F MV ++
Sbjct: 504 GFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFT 563
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P V+HY CMVDLLG +G LDEA +LI M ++P+ V+G+ L +CKLH ++KL E A ++
Sbjct: 564 PKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQ 623
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
+ LEPH +G V++SNIYA A W VA +R+ M D GI K S IEV H F+
Sbjct: 624 FLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIM 683
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD HP+ ++Y + + ++++AGY P V H+++ ++K + + HSE+LA+A+GL
Sbjct: 684 GDREHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGL 743
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I+T G + I KNL++CDDCH A K +SKI REI VRD NR+HHFK+G CSC DYW
Sbjct: 744 ISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 181/374 (48%), Gaps = 43/374 (11%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFH + L+ +YS L A LFD+I +++ W+ +IR+Y +G + A++L
Sbjct: 154 GFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLL 213
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK--WETDVFVGAALIDMYA 119
+ + + P + L+ ++ G+ +H V+RN ++ V + ALIDMY
Sbjct: 214 RDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYV 273
Query: 120 KCSCVVNARQVFDKILERD---------------------------------PSEATLVT 146
KC + AR+VFD + + P+E T+++
Sbjct: 274 KCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLS 333
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ AL G+ LH F+ R+ F L++ + TA +DMY KCG V+ AR++F+ + K
Sbjct: 334 LVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKD 393
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
++ W+AMI+ YA + +A D+F M ++P+ T V +L C++ G + G+ +
Sbjct: 394 LMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGK-WIH 452
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
S + I + T VD+ + G +D A L + + D +W A+++ +HGH
Sbjct: 453 SYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDR-DISMWNAMISGFAMHGH- 510
Query: 326 KLAELALEKLIELE 339
E ALE E+E
Sbjct: 511 --GEAALELFEEME 522
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 146/318 (45%), Gaps = 38/318 (11%)
Query: 37 NLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIH 96
N + + LI +Y N A ++Y + DNF P LKAC + + G+ +H
Sbjct: 88 NAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVH 147
Query: 97 EDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------------------ 138
V++N + DVFV ALI MY++ + AR +FDKI +D
Sbjct: 148 GFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLD 207
Query: 139 ---------------PSEATLVTVISASADIAALPQGRELHGFSWRHR--FELNVKVKTA 181
PSE ++++ A++A L G+ +H + R+ + V + TA
Sbjct: 208 EALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTA 267
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPD 240
L+DMY KC + AR +F+ L + ++SW AMI Y + + + LF KM E + P+
Sbjct: 268 LIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPN 327
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
IT + ++ C G + G++ +R+ S+ T +D+ G G + A +
Sbjct: 328 EITMLSLVKECGTAGALELGKLLHAFTLRN-GFTLSLVLATAFIDMYGKCGDVRSARSVF 386
Query: 301 MQMRVKPDPGVWGALLNS 318
+ K D +W A+++S
Sbjct: 387 DSFKSK-DLMMWSAMISS 403
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 2/144 (1%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+L T V +Y+ C + AH+LF R++ +WN +I +A +G E A+EL+ + +
Sbjct: 465 ILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEAL 524
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRI-HEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
G+ P++ TF AL ACS ++EG+R+ H+ V + V ++D+ + +
Sbjct: 525 GVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDE 584
Query: 127 ARQVFDKILERDPSEATLVTVISA 150
A ++ + R P+ A + ++A
Sbjct: 585 AHELIKSMPMR-PNIAVFGSFLAA 607
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 3/147 (2%)
Query: 104 WETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLV--TVISASADIAALPQGR 161
+ ++ + + LI Y K +C +A +++ + D V +V+ A I + G+
Sbjct: 85 YSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQ 144
Query: 162 ELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHG 221
E+HGF ++ F +V V AL+ MY++ G + +AR LF+++ K VVSW+ MI Y G
Sbjct: 145 EVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSG 204
Query: 222 HSTKALDLFEKMK-DEVQPDHITFVGV 247
+ALDL M V+P I + +
Sbjct: 205 LLDEALDLLRDMHVMRVKPSEIGMISI 231
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/540 (38%), Positives = 324/540 (60%), Gaps = 28/540 (5%)
Query: 1 MGFGFHPVLATKLVHLYSACD---CLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVA 57
MG ++ LV +Y+ + + A+++F+R+P+ ++ W LI Y +G E
Sbjct: 283 MGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENK 342
Query: 58 I-ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
+ L+ +L + P++ T+ LK+C+++S + GR++H VI++ + VG AL+
Sbjct: 343 VMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVS 402
Query: 117 MYAKCSCVVNARQVFDKILERDP-----------------------SEATLVTVISASAD 153
MYA+ C+ AR+VF+++ ER S +T ++ISA+A
Sbjct: 403 MYAESGCMEEARRVFNQLYERSMIPCITEGRDFPLDHRIVRMDVGISSSTFASLISAAAS 462
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+ L +G++LH S + F + V +LV MY++CG ++ A F +L+++ V+SW +M
Sbjct: 463 VGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSM 522
Query: 214 ITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I+G A HG++ +AL LF M V+P+ +T++ VLSACS GL EG+ +F SM RD+
Sbjct: 523 ISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHG 582
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
+ P ++HY CMVDLL SG + EA + I +M +K D VW LL +C+ H ++++ E+
Sbjct: 583 LIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITA 642
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
+ ++ELEP D YV+LSN+YA A W+ VA++R M D + K SW+EV+N H F
Sbjct: 643 KNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEF 702
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
+GD SHP +IY KL L ++K GYVP T V HD+ ++ K + HSE++A+AF
Sbjct: 703 RAGDTSHPRAQDIYGKLDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAF 762
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
GLI T + I KNL++C DCH AIK++SK T REI +RD NR+H KDG CSCG+YW
Sbjct: 763 GLITTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 157/337 (46%), Gaps = 42/337 (12%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQ-RNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
V+A L+ LYS C + +A +FD + R++ W + A NG ++ L +LE
Sbjct: 85 VVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLIGEMLE 144
Query: 67 IGLVPDNFTFPFALKAC--SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
GL+P+ +T A AC L + G + W TDV VG+ALIDM A+ +
Sbjct: 145 SGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGLWGTDVAVGSALIDMLARNGDL 204
Query: 125 VNARQVFDKILER---------------------------------DPSEATLVTVISAS 151
+AR+VFD ++E+ +P T+ ++ISA
Sbjct: 205 ASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSSMISAC 264
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGL---VKVARNLFEQLREKRVV 208
++ ++ G +LH + R + V LVDMYAK + + A +FE++ + V+
Sbjct: 265 TELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVI 324
Query: 209 SWNAMITGYAMHG-HSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
SW A+I+GY G K + LF +M +E ++P+HIT+ +L +C+ D GR
Sbjct: 325 SWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAH 384
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
+++ +V + SG ++EA + Q+
Sbjct: 385 VIKSNQASAHTVG-NALVSMYAESGCMEEARRVFNQL 420
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 174/412 (42%), Gaps = 52/412 (12%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
+G + + L+ + + L +A ++FD + ++ + +W +LI Y E A+EL+
Sbjct: 184 WGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFL 243
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
LE G PD +T + AC+ L ++ G ++H +R +D V L+DMYAK +
Sbjct: 244 DFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSN 303
Query: 123 ---CVVNARQVFDKILERD----------------------------------PSEATLV 145
+ A +VF+++ + D P+ T
Sbjct: 304 IGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYS 363
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+++ + A I+ GR++H + V ALV MYA+ G ++ AR +F QL E+
Sbjct: 364 SILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYER 423
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
++ + + H +D V TF ++SA + G+ +G+
Sbjct: 424 SMIPCITEGRDFPLD-HRIVRMD--------VGISSSTFASLISAAASVGMLTKGQQLHA 474
Query: 266 -SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
S+ + D V + +V + G L++AC +++ + + W ++++ HG+
Sbjct: 475 MSLKAGFGSDRFVSN--SLVSMYSRCGYLEDACRSFNELKDR-NVISWTSMISGLAKHGY 531
Query: 325 VKLAELALEKLI--ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
+ A +I ++P+D +LS EG R + D G+
Sbjct: 532 AERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGL 583
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 160 GRELHGFSWR-HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR-VVSWNAMITGY 217
GR LH R + + V +L+ +Y++CG V ARN+F+ +R R +VSW AM +
Sbjct: 67 GRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCL 126
Query: 218 AMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSAC 251
A +G +L L E ++ + P+ T AC
Sbjct: 127 ARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHAC 161
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/561 (37%), Positives = 323/561 (57%), Gaps = 57/561 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL-LEI 67
+ + LV +Y C + + +FD + R + LWN +I YA + E A+ L+ +
Sbjct: 254 VGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAA 313
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
GL + T + A I IH VI+ ET+ ++ ALIDMY++ + +
Sbjct: 314 GLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTS 373
Query: 128 RQVFDKILERD------------------------------------------------- 138
+++FD + +RD
Sbjct: 374 KRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFK 433
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P+ TL+TV+ A ++AL +G+E+H ++ R+ V V +ALVDMYAKCG + +AR +
Sbjct: 434 PNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRV 493
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM------KDEVQPDHITFVGVLSACS 252
F+Q+ + V++WN +I Y MHG ++L+LFE M EV+P +TF+ + ++CS
Sbjct: 494 FDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCS 553
Query: 253 RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP-GV 311
G+ DEG F M ++ I+P+ HY C+VDL+G +G+++EA L+ M D G
Sbjct: 554 HSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGA 613
Query: 312 WGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMID 371
W +LL +C+++ ++++ E+A E L++L+P A +YV+LSNIY+ A W+ LR+ M
Sbjct: 614 WSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKA 673
Query: 372 RGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHD 431
G+KK CSWIE ++ H FL+GD SHP ++++ L+ L R+K+ GYVP T V HD
Sbjct: 674 MGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYVPDTACVLHD 733
Query: 432 VENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREIT 491
++ +EK ++C HSE+LAIAFG++NTP GT + + KNL++C+DCH A KFISKI +REI
Sbjct: 734 IDEEEKETILCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHTASKFISKIEDREII 793
Query: 492 VRDVNRYHHFKDGICSCGDYW 512
+RD R+HHFKDG CSCGDYW
Sbjct: 794 LRDARRFHHFKDGTCSCGDYW 814
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 193/430 (44%), Gaps = 73/430 (16%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI-GLVP 71
L+ +Y+ L +A L R+L WN +I +++ N + A+ ++ RL+ + G+ P
Sbjct: 156 LMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEAL-MFLRLMVLEGVKP 214
Query: 72 DNFTFPFALKACSALSAIEEGRRIH------EDVIRNKWETDVFVGAALIDMYAKCSCVV 125
D TF L ACS L + G+ IH +DVI N FVG+AL+DMY C V
Sbjct: 215 DGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENS-----FVGSALVDMYCNCGQVE 269
Query: 126 NARQVFDKILERD----------------------------------PSEATLVTVISAS 151
+ R VFD +L+R + T+ +++ A
Sbjct: 270 SGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAY 329
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+ + +HG+ + E N ++ AL+DMY++ G +K ++ +F+ + ++ +VSWN
Sbjct: 330 VRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWN 389
Query: 212 AMITGYAMHGHSTKALDLFEKMK-------------DEVQ----PDHITFVGVLSACSRG 254
+IT Y + G S+ AL L +M+ DE Q P+ IT + VL C+
Sbjct: 390 TIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASL 449
Query: 255 GLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGA 314
+G+ +R+ + V + +VD+ G L+ A + QM ++ + W
Sbjct: 450 SALAKGKEIHAYAIRNL-LASQVTVGSALVDMYAKCGCLNLARRVFDQMPIR-NVITWNV 507
Query: 315 LLNSCKLHGHVKLAELALEKLI-------ELEPHDAGNYVILSNIYARAANWEGVAKLRK 367
++ + +HG K + E ++ E++P + + ++ EG++ K
Sbjct: 508 IIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHK 567
Query: 368 LMIDRGIKKS 377
+ + GI+ +
Sbjct: 568 MKNEHGIEPA 577
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 130/273 (47%), Gaps = 42/273 (15%)
Query: 2 GFG-FHPV-LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIE 59
G+G F V + LV++Y C L +A+++FDRI +R+ WN +I A +EVAI+
Sbjct: 40 GYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIK 99
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSAL---SAIEEGRRIHEDVIR-NKWETDVFVGAALI 115
+ +L G P +FT ACS L + G++IH R W T F AL+
Sbjct: 100 AFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHWRT--FSNNALM 157
Query: 116 DMYAKCSCVVNARQVFDKILERD---------------------------------PSEA 142
MYAK + +A+ + +RD P
Sbjct: 158 AMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGV 217
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFEL-NVKVKTALVDMYAKCGLVKVARNLFEQ 201
T +V+ A + + L G+E+H ++ R + N V +ALVDMY CG V+ R +F+
Sbjct: 218 TFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDS 277
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
+ ++++ WNAMI GYA H KAL LF +M+
Sbjct: 278 VLDRKIGLWNAMIAGYAQSEHDEKALMLFIEME 310
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 161/354 (45%), Gaps = 49/354 (13%)
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWET--DVFVGAALIDMYAKCSCVV 125
G PDNF FP LKA + + + G++IH V + + + V + L++MY KC +
Sbjct: 5 GFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLG 64
Query: 126 NARQVFDKILERD---------------------------------PSEATLVTVISASA 152
+A +VFD+I ERD PS TLV++ A +
Sbjct: 65 DAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACS 124
Query: 153 DIA---ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
++ L G+++HG +R + AL+ MYAK G + A++L ++ +V+
Sbjct: 125 NLRKRDGLWLGKQIHGCCFR-KGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVT 183
Query: 210 WNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WN+MI+ ++ + +AL M E V+PD +TF VL ACS L G+ +
Sbjct: 184 WNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYAL 243
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
R + + + +VD+ + G++ E+ L+ + G+W A++ H
Sbjct: 244 RTDDVIENSFVGSALVDMYCNCGQV-ESGRLVFDSVLDRKIGLWNAMIAGYAQSEH---D 299
Query: 329 ELALEKLIELEPHDA--GNYVILSNIYARAANWEGVAK---LRKLMIDRGIKKS 377
E AL IE+E N +S+I EG+++ + +I RG++ +
Sbjct: 300 EKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETN 353
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/523 (41%), Positives = 318/523 (60%), Gaps = 37/523 (7%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYA-WNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
A LF+ + + ++ ++N + R Y+ + P EV L+ +LE G++PDN+TFP LKAC+
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEV-FSLFVEILEDGILPDNYTFPSLLKACA 140
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER------- 137
A+EEGR++H ++ + +V+V LI+MY +C V +AR VFD+I+E
Sbjct: 141 VAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNA 200
Query: 138 --------------------------DPSEATLVTVISASADIAALPQGRELHGFSWRHR 171
P+E TL++V+S+ A + +L G+ +H ++ +H
Sbjct: 201 MITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHS 260
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
F VKV TAL+DM+AKCG + A ++FE++R K +W+AMI YA HG + K++ +FE
Sbjct: 261 FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFE 320
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+M+ E VQPD ITF+G+L+ACS G +EGR +F MV + I PS++HY MVDLL +
Sbjct: 321 RMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRA 380
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
G L++A + I ++ + P P +W LL +C H ++ LAE E++ EL+ G+YVILS
Sbjct: 381 GNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILS 440
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
N+YAR WE V LRK+M DR K CS IEV N H F SGD +++ L
Sbjct: 441 NLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALD 500
Query: 411 WLEGRMKEAGYVPGTESVFHDVEND-EKANMICCHSERLAIAFGLINTPDGTRLLITKNL 469
+ +K +GYVP T V H ND EK + HSE+LAI FGL+NTP GT + + KNL
Sbjct: 501 EMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNL 560
Query: 470 KICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++C DCH A K IS I R++ +RDV R+HHF+DG CSCGD+W
Sbjct: 561 RVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/542 (39%), Positives = 315/542 (58%), Gaps = 35/542 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+ ++S+ C A +F ++ ++L W +I Y NG E A+E Y
Sbjct: 326 GFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETY 385
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+VPD T L AC+ L +++G +HE R + V V +LIDMY+KC
Sbjct: 386 TIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKC 445
Query: 122 SCVVNARQVFDKI--------------------------------LERDPSEATLVTVIS 149
C+ A +VF +I L P+ TLV+V+S
Sbjct: 446 RCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLS 505
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A A I AL G+E+H + R + + AL+DMY +CG ++ A N F EK V S
Sbjct: 506 ACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVAS 564
Query: 210 WNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WN ++TGYA G A++LF KM + +V PD ITF +L ACSR G+ +G +FESM
Sbjct: 565 WNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESME 624
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+HI P+++HY +VDLLG +GRL++A + I +M + PDP +WGALLN+C+++ +V+L
Sbjct: 625 HKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELG 684
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
ELA + + E++ G Y++L N+YA + W+ VA++RK+M + + CSW+EV +
Sbjct: 685 ELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQ 744
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
HAFL+GD HP EI A L+ +M+ G +S D++ KA + C HSERL
Sbjct: 745 VHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRRDDIDAS-KAEIFCGHSERL 803
Query: 449 AIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
AIAFGLINT GT + +TKNL +C++CH +KFISK+ R I+VRD ++HHFKDG+CSC
Sbjct: 804 AIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSC 863
Query: 509 GD 510
GD
Sbjct: 864 GD 865
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 187/379 (49%), Gaps = 41/379 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+ ++ L A +F ++ +R+LF WNVL+ YA G ++ A+ LY+R+L +G
Sbjct: 131 LGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVG 190
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD +TFP L+ C L + GR +H VIR +E+DV V ALI MY KC + +AR
Sbjct: 191 IRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSAR 250
Query: 129 QVFDKILER---------------------------------DPSEATLVTVISASADIA 155
VFD++ R DP T+ +VISA +
Sbjct: 251 LVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALG 310
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
GRE+HG+ + F V V +L+ M++ G A +F ++ K +VSW AMI+
Sbjct: 311 DERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMIS 370
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GY +G KA++ + M+ E V PD IT VLSAC+ GL D+G M E R +
Sbjct: 371 GYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRT-GLT 429
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGHVKLAELAL 332
V ++D+ +D+A ++ ++ P+ V W +++ +L+ A
Sbjct: 430 SYVIVANSLIDMYSKCRCIDKALEVFHRI---PNKNVISWTSIILGLRLNYRSFEALFFF 486
Query: 333 EKLI-ELEPHDAGNYVILS 350
+++I L+P+ +LS
Sbjct: 487 QQMILSLKPNSVTLVSVLS 505
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 165/370 (44%), Gaps = 38/370 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+ +Y C + +A +FDR+P+R+ WN +I Y N + L+
Sbjct: 225 GFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLF 284
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + E + PD T + AC AL GR +H VI+ + +V V +LI M++
Sbjct: 285 FMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSV 344
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
C A VF K+ +D P E T+ +V+
Sbjct: 345 GCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVL 404
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A + L +G LH F+ R V V +L+DMY+KC + A +F ++ K V+
Sbjct: 405 SACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVI 464
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
SW ++I G ++ S +AL F++M ++P+ +T V VLSAC+R G G+ +
Sbjct: 465 SWTSIILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHAL 524
Query: 269 RD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
R D + + ++D+ GR++ A + + D W LL G L
Sbjct: 525 RTGLGFDGFLPN--ALLDMYVRCGRMEPAWNQFNS--CEKDVASWNILLTGYAQQGKGGL 580
Query: 328 AELALEKLIE 337
A K+IE
Sbjct: 581 AVELFHKMIE 590
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 143/332 (43%), Gaps = 39/332 (11%)
Query: 42 NVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR 101
N LI G E A+ + E+ + + T+ L+ C A EG R+H V +
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 102 NKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----------------------- 138
V +G AL+ M+ + +V A VF K+ ERD
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182
Query: 139 ----------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
P T V+ + L +GRE+H R+ FE +V V AL+ MY K
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGV 247
CG + AR +F+++ + +SWNAMI+GY + + L LF M++ V PD +T V
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
+SAC G GR +++ + V ++ + G DEA + +M K
Sbjct: 303 ISACEALGDERLGREVHGYVIKTGFV-AEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFK- 360
Query: 308 DPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
D W A+++ + +G L E A+E +E
Sbjct: 361 DLVSWTAMISGYEKNG---LPEKAVETYTIME 389
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/541 (39%), Positives = 310/541 (57%), Gaps = 34/541 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF ++ LV +Y C+H+ +L++ + R+L WN + G Y+ + ++
Sbjct: 445 GFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIF 504
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
Y +LE G +P+ +TF L +CS L + GR++H +I+N+ + + FV ALIDMYAKC
Sbjct: 505 YHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKC 564
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +A F+++ RD P+E TL +
Sbjct: 565 MYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCL 624
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
S + +A+L G++LH ++ ++ V +ALVDMYAKCG ++ A LFE L + +
Sbjct: 625 SGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTI 684
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WN +I GYA +G KAL F M DE + PD +TF G+LSACS GL +EG+ F SM
Sbjct: 685 AWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSM 744
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
RD+ I P+V H CMVD+LG G+ DE D I +M++ + +W +L + K+H ++ L
Sbjct: 745 YRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVL 804
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E A KL EL+P + +Y++LSNI+A W+ V ++R LM +G+KK CSW+E
Sbjct: 805 GEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANG 864
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ H F+S D SHP EI+ KL L+ + YVP TE V H+V EK + HSER
Sbjct: 865 QVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSER 924
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+ F LI+T ++ I KNL+IC DCH +K IS IT +EI VRDV R+HHFK+G CS
Sbjct: 925 LALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACS 984
Query: 508 C 508
C
Sbjct: 985 C 985
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 163/332 (49%), Gaps = 39/332 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + LV LY+ C + A ++F +P++N WNVL+ YA G ++L
Sbjct: 242 LGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKL 301
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++E+ + + FT LK C+ +++G+ IH +I+ +E + F+G L+DMY+K
Sbjct: 302 FCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSK 361
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C ++A VF I + D P++ T+ ++
Sbjct: 362 CGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSL 421
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+SA+ + L G+ +H W++ FE +V V ALV MY K G V L+E + ++ +
Sbjct: 422 LSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDL 481
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFD--EGRMFF 264
+SWNA ++G G + L +F M +E P+ TF+ +L +CS LFD GR
Sbjct: 482 ISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS--CLFDVHYGRQVH 539
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
++++ +D + T ++D+ L++A
Sbjct: 540 AHIIKN-QLDDNNFVCTALIDMYAKCMYLEDA 570
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 157/343 (45%), Gaps = 36/343 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L LV++Y+ C A + ++P R++ W LI+ G +I L+ + G
Sbjct: 149 LWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEG 208
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
++P+ FT LKACS A++ G+++H + D+FVG+AL+D+YAKC + A
Sbjct: 209 IMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELAS 268
Query: 129 QVFDKILERDP---------------------------------SEATLVTVISASADIA 155
++F + E++ +E TL TV+ A+
Sbjct: 269 KMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSK 328
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L QG+ +H + +E N + LVDMY+KCGL A +F+ +++ +V W+A+IT
Sbjct: 329 NLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALIT 388
Query: 216 GYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G S +++ LF M+ + P+ T +LSA + G G+ + V Y +
Sbjct: 389 CLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQS-IHACVWKYGFE 447
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
V +V + +G + + L M V D W A L+
Sbjct: 448 TDVAVSNALVTMYMKNGCVHDGTKLYESM-VDRDLISWNAYLS 489
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 114/250 (45%), Gaps = 12/250 (4%)
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+++ A +L + +HG + + + +LV++YAKC AR + ++ ++
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR 176
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR-MF 263
VVSW A+I G G + ++ LF++M++E + P+ T L ACS D G+ M
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMH 236
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
++ +D V + +VDL G ++ A + + M + D W LLN G
Sbjct: 237 AQAFKLGLLLDLFVG--SALVDLYAKCGEIELASKMFIGMPEQNDV-TWNVLLNGYAQRG 293
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAK---LRKLMIDRGIKKS--I 378
V ++EL+ N L+ + AN + + + + L+I G + + I
Sbjct: 294 DVTGVLKLFCSMMELDV--KCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFI 351
Query: 379 ACSWIEVKNK 388
C +++ +K
Sbjct: 352 GCGLVDMYSK 361
>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/522 (40%), Positives = 310/522 (59%), Gaps = 35/522 (6%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +F +I + F +N +IR + E A+ LY +LE G+ PDNFT+PF LKACS
Sbjct: 84 ACSIFSQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSL 143
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
L A++EG +IH V + E DVFV LI MY KC + +A VF+++ E+
Sbjct: 144 LVALKEGVQIHAHVFKAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSI 203
Query: 139 ---------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHR 171
E+ LV+ +SA + + GR +HG R+
Sbjct: 204 IGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNLGRCIHGILLRNI 263
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
ELNV VKT+L+DMY KCG ++ +F+ + K S+ MI G A+HG +A+ +F
Sbjct: 264 SELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREAVRVFS 323
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
M +E + PD + +VGVLSACS GL +EG F M ++ I P++QHY CMVDL+G +
Sbjct: 324 DMLEEGLTPDDVVYVGVLSACSHAGLVNEGLQCFNRMQFEHMIKPTIQHYGCMVDLMGRA 383
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
G L EA DLI M +KP+ VW +LL++CK+H ++++ E+A E + L H+ G+Y++L+
Sbjct: 384 GMLKEAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEIGEIAAENIFRLNKHNPGDYLVLA 443
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
N+YARA W VA++R M ++ + ++ S +E + F+S D S P C+ IY ++
Sbjct: 444 NMYARAKKWANVARIRTEMAEKHLVQTPGFSLVEANRNVYKFVSQDKSQPICETIYDMIQ 503
Query: 411 WLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLK 470
+E ++K GY P V DV+ DEK + HS++LAIAF LI T +G+ + I++NL+
Sbjct: 504 QMEWQLKFEGYTPDMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSPIRISRNLR 563
Query: 471 ICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+C+DCH KFIS I EREITVRD NR+HHFKDG CSC DYW
Sbjct: 564 MCNDCHTYTKFISVIYEREITVRDRNRFHHFKDGTCSCKDYW 605
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+ T L+ +Y C L +F + +N + + V+I A +G A+ ++ +LE
Sbjct: 269 VVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREAVRVFSDMLEE 328
Query: 68 GLVPDNFTFPFALKACSALSAIEEG 92
GL PD+ + L ACS + EG
Sbjct: 329 GLTPDDVVYVGVLSACSHAGLVNEG 353
Score = 38.5 bits (88), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 5/134 (3%)
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFV 245
++ G ++ A ++F Q+ E +N MI G +AL L+ E ++ ++PD+ T+
Sbjct: 76 SRWGSMEYACSIFSQIEEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYP 135
Query: 246 GVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
VL ACS EG + + +D VQ+ ++ + G G ++ A + QM
Sbjct: 136 FVLKACSLLVALKEGVQIHAHVFKAGLEVDVFVQN--GLISMYGKCGAIEHAGVVFEQMD 193
Query: 305 VKPDPGVWGALLNS 318
K W +++ +
Sbjct: 194 EK-SVASWSSIIGA 206
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/545 (39%), Positives = 317/545 (58%), Gaps = 37/545 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
FG + L+ +YS+ L A +F R+ +++ W +I + + A+E Y
Sbjct: 330 FGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYK 389
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+ G++PD T L AC+ + ++ G R+HE I+ + V V +LIDMY+KC
Sbjct: 390 MMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCK 449
Query: 123 CVVNARQVFDKILERD--------------------------------PSEATLVTVISA 150
CV NA +VF I ++ P+ TL++V+SA
Sbjct: 450 CVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESMKPNSVTLISVLSA 509
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
A I AL +G+E+H + R + + A++DMY +CG A N F ++K V +W
Sbjct: 510 CARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAW 568
Query: 211 NAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
N ++TGYA G + A++LF+KM + E+ PD ITF+ +L ACS+ G+ EG +F M
Sbjct: 569 NILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKN 628
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
Y++ P+++HY C+VD+LG +G+LD+A D I M ++PD +WGALLN+C++H +V+L E
Sbjct: 629 KYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGE 688
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
+A +++ E + G Y++L N+YA NW+ V+K+R LM +RG+ CSW+E+K K
Sbjct: 689 IAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKV 748
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLA 449
HAFLSGD SH EI L +MKE G+ S ++E+ +A++ C HSER A
Sbjct: 749 HAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKSSFTSEIESS-RADIFCGHSERQA 807
Query: 450 IAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
IAFGLINT G + +TKNL +C CH +KFIS I REI+VRDV YHHFKDG+CSCG
Sbjct: 808 IAFGLINTAPGMPIWVTKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCG 867
Query: 510 D--YW 512
D YW
Sbjct: 868 DEGYW 872
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 151/295 (51%), Gaps = 34/295 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+ ++ L +A +F ++ +R++F WNVL+ YA G ++ A+ LY+R+L
Sbjct: 134 LGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAE 193
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P+ +TFP LK C+ +S I G+ IH VIR +E+DV VG ALI MY KC + NAR
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNAR 253
Query: 129 QVFDKILER---------------------------------DPSEATLVTVISASADIA 155
+FDK+ +R DP T+ TV SA +
Sbjct: 254 MLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLD 313
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
GR +HG+ + F ++ + +L+ MY+ G ++ A +F ++ K VVSW AMI
Sbjct: 314 NERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIA 373
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
H KA++ ++ M+ E + PD IT V VLSAC+ G D G E ++
Sbjct: 374 SLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIK 428
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 171/375 (45%), Gaps = 40/375 (10%)
Query: 3 FGFHPVL--ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
FGF + L+ +Y C + NA LFD++P+R+ WN +I Y NG +EL
Sbjct: 227 FGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLEL 286
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + E+ + PD T AC L GR +H V+++++ D+ + +LI MY+
Sbjct: 287 FSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSS 346
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ A VF ++ +D P E TLV+V
Sbjct: 347 LGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSV 406
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+SA A I L G LH + + +V V +L+DMY+KC V A +F + K V
Sbjct: 407 LSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNV 466
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
VSW ++I G ++ S +AL F +MK+ ++P+ +T + VLSAC+R G G+
Sbjct: 467 VSWTSLILGLRINNRSFEALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHA 526
Query: 268 VRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+R D + + ++D+ GR A + K D W LL G K
Sbjct: 527 LRTGVGFDGFLPN--AILDMYVRCGRKVPALNQFNSQ--KKDVTAWNILLTGYAQQGQAK 582
Query: 327 LAELALEKLIELEPH 341
LA +K++ELE H
Sbjct: 583 LAVELFDKMLELEIH 597
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 156/336 (46%), Gaps = 45/336 (13%)
Query: 42 NVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR 101
N+ +R G E A++ +LE+ + + + L+ C A +EG R++E V
Sbjct: 66 NLELRELCLQGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSS 125
Query: 102 NKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----------------------- 138
+K V +G AL+ M+ + +++A VF K+ ERD
Sbjct: 126 SKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNL 185
Query: 139 ----------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
P+ T +V+ A ++ + +G+E+H R FE +V V AL+ MY K
Sbjct: 186 YHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVK 245
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGV 247
CG + AR LF+++ ++ +SWNAMI+GY +G + L+LF M++ V PD IT V
Sbjct: 246 CGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTV 305
Query: 248 LSACSRGGLFDEGRM--FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
SAC L D R+ V + ++ + GRL+EA + +M
Sbjct: 306 ASACE---LLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMES 362
Query: 306 KPDPGVWGALLNSCKLHGHVKLAELALE--KLIELE 339
K D W A++ S H KL A+E K++ELE
Sbjct: 363 K-DVVSWTAMIASLVSH---KLPFKAVETYKMMELE 394
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 28/255 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G GF L ++ +Y C A F+ ++++ WN+L+ YA G ++A+EL+
Sbjct: 530 GVGFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELF 588
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMYA 119
++LE+ + PD TF L ACS + EG + ++++NK+ + A ++D+
Sbjct: 589 DKMLELEIHPDEITFISLLCACSKSGMVTEGLE-YFNIMKNKYNLTPNLKHYACVVDILG 647
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELN---V 176
+ + +A + R P A +++A + + EL + + FE + V
Sbjct: 648 RAGQLDDAYDFIQDMPIR-PDAAIWGALLNA----CRIHRNVELGEIAAKRVFEKDNKSV 702
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRV-----VSW-------NAMITGYAMHGHST 224
L ++YA CG + +RE+ + SW +A ++G H S
Sbjct: 703 GYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSK 762
Query: 225 K---ALDLF-EKMKD 235
+ LD F KMK+
Sbjct: 763 EINGVLDGFCSKMKE 777
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/545 (38%), Positives = 320/545 (58%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF F+ + + L+ +Y+ L AH + + + ++ W LI YA + + A++ +
Sbjct: 445 GFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHF 504
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+L G+ DN F A+ AC+ + A+ +GR+IH + + D+ +G AL+ +YA+C
Sbjct: 505 KEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARC 564
Query: 122 SCVVNARQVFDKI------------------------------LERDPSEATLVT---VI 148
+ A F+KI + R EA+ T +
Sbjct: 565 GRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAV 624
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA+A+IA + QG+++H + F+ +++V AL+ YAKCG ++ AR F ++ EK V
Sbjct: 625 SAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDV 684
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNAMITGY+ HG+ +A++LFEKMK + P+H+TFVGVLSACS GL +G +FESM
Sbjct: 685 SWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESM 744
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+++ + P HY C+VDL+ +G L A I +M ++PD +W LL++C +H +V++
Sbjct: 745 SKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEV 804
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E A + L+ELEP D+ YV+LSN+YA + W+ + R++M +RG+KK SWIEVKN
Sbjct: 805 GEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKN 864
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
HAF GD HP D+IY L L + E GY S+ +DVE ++K + HSE+
Sbjct: 865 SVHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEK 924
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAI FGL++ D + + KNL++C DCH IKF+SKI+ R I VRD R+HHF+ GICS
Sbjct: 925 LAITFGLLSLSDTVPIHVMKNLRVCKDCHSWIKFVSKISNRAIIVRDAYRFHHFEGGICS 984
Query: 508 CGDYW 512
C DYW
Sbjct: 985 CKDYW 989
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 174/371 (46%), Gaps = 36/371 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G ++ L+ LY C + AH++F N+ LWNV++ A+ + ++
Sbjct: 344 GISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIF 403
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ GL+P+ FT+P L+ C+++ A++ G +IH VI+ ++ +V+V + LIDMYAK
Sbjct: 404 RQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKH 463
Query: 122 SCVVNARQVFDKILERDPSEATLV---------------------------------TVI 148
+ A + + E D T + + I
Sbjct: 464 GKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAI 523
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A I AL QGR++H S+ + ++ + ALV +YA+CG +K A FE++ K +
Sbjct: 524 SACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSI 583
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWN +I+G+A G+ AL +F +M + +++ TF +SA + +G+ +M
Sbjct: 584 SWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQ-IHAM 642
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ D ++ ++ G +++A +M K D W A++ HG+
Sbjct: 643 IIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVS-WNAMITGYSQHGYGNE 701
Query: 328 AELALEKLIEL 338
A EK+ ++
Sbjct: 702 AVNLFEKMKQV 712
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 188/417 (45%), Gaps = 41/417 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + LV LYS +A ++F ++ ++ +N LI A G + A+EL+
Sbjct: 243 GSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELF 302
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ L PD T L AC++ A+ +G ++H VI+ +D+ V AL+D+Y C
Sbjct: 303 TKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNC 362
Query: 122 SCVVNARQVF---------------------DKILER------------DPSEATLVTVI 148
S + A ++F D + E P++ T +++
Sbjct: 363 SDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSIL 422
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+ AL G ++H + F+ NV V + L+DMYAK G + A + L E VV
Sbjct: 423 RTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVV 482
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF-ES 266
SW A+I+GYA H +AL F++M + +Q D+I F +SAC+ ++GR +S
Sbjct: 483 SWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQS 542
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
V Y D S+ + +V L GR+ EA ++ K D W L++ G+ +
Sbjct: 543 YVSGYSEDLSIGN--ALVSLYARCGRIKEAYLEFEKIDAK-DSISWNGLISGFAQSGYCE 599
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARA--ANWEGVAKLRKLMIDRGIKKSIACS 381
A L + + +A + S + A A AN + ++ ++I RG I S
Sbjct: 600 DA-LKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVS 655
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 123/532 (23%), Positives = 214/532 (40%), Gaps = 113/532 (21%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GFG VL KLV +Y A L ++F+ +P R++ W+ +I + ++L
Sbjct: 39 LGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDL 98
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALS-AIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
+ ++E + P +F L+ACS I +IH +I + + LI +YA
Sbjct: 99 FSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYA 158
Query: 120 KCSCVVNARQVFDKILERD---------------------------------PSEATLVT 146
K +++AR+VFD + +D P+ +
Sbjct: 159 KNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSS 218
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V+S I G +LH +++ L V ALV +Y++ A +F +++ K
Sbjct: 219 VLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKD 278
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGR---- 261
VS+N++I+G A G S AL+LF KMK D ++PD +T +LSAC+ G +G
Sbjct: 279 EVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHS 338
Query: 262 ----------MFFESMVRDYHIDPS----------------VQHYTCMVDLLGHSGRLDE 295
M E + D +++ S V + M+ G L E
Sbjct: 339 YVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSE 398
Query: 296 ACDLIMQMRVK---PDPGVWGALLNSCKLHGHVKLAELALEKLIE--------------- 337
+ + QM++K P+ + ++L +C G + L E ++I+
Sbjct: 399 SFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLID 458
Query: 338 -----------------LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKS--- 377
L D ++ L + YA+ + K K M++RGI+
Sbjct: 459 MYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIG 518
Query: 378 -----IACSWIEVKNK-----AHAFLSGDASHPNCDEIYAKLKWLEGRMKEA 419
AC+ I+ N+ A +++SG + + L GR+KEA
Sbjct: 519 FSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEA 570
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/515 (40%), Positives = 310/515 (60%), Gaps = 5/515 (0%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + LV +Y C CL A ++ D++P R++ WN ++ YA +G ++ A+E+
Sbjct: 166 VGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEI 225
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + L D T +L +++E + IH ++ + ++ +I +Y
Sbjct: 226 CKEMDSLNLNHDAGTMA-SLSPVVCYTSLENVQYIH-NMFERMTKKNLISWNVMIAIYVN 283
Query: 121 CSCVVNARQVFDKILE--RDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
S A +F ++ E P T+ +++ A D++AL GR LH + + N+ +
Sbjct: 284 NSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLL 343
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ 238
+ AL+DMYAKCG ++ AR++F+++R + VVSW +M++ Y G A+ LF KM D Q
Sbjct: 344 ENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQ 403
Query: 239 -PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
PD I FV VLSACS GL D+GR +F M Y I P ++H+ CMVDL G +G ++EA
Sbjct: 404 NPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAY 463
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAA 357
I QM ++P+ VWGALL++C++H + + +A + L +L P +G YV+LSNIYA+A
Sbjct: 464 SFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAG 523
Query: 358 NWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK 417
W+ V +R M GIKK S +E+ + H FL+GD HP IY +L L G+MK
Sbjct: 524 MWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMK 583
Query: 418 EAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHI 477
E GY+P TES HDVE ++K + HSE+LAI F ++NT GT + ITKNL++C DCHI
Sbjct: 584 ELGYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHI 643
Query: 478 AIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
AIK ISKI R I VRD NR+HHF +GICSCGDYW
Sbjct: 644 AIKLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 169/315 (53%), Gaps = 7/315 (2%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P LA KL+ YSA A +FDR ++N+ +NV+IR+Y N Y A+ ++ +L
Sbjct: 71 PTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLS 130
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
PD++TFP LKACS L + G ++H+ +++ +T++F+G AL+ MY KC C+
Sbjct: 131 CAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLRE 190
Query: 127 ARQVFDKILERD-PSEATLVTVISASADI-AALPQGRELHGFSWRHRFELNVKVKTALVD 184
AR+V D++ RD S ++V + S AL +E+ + H + + V
Sbjct: 191 ARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNH--DAGTMASLSPVV 248
Query: 185 MYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHIT 243
Y V+ N+FE++ +K ++SWN MI Y + +A+ LF +M++ ++PD +T
Sbjct: 249 CYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVT 308
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
+L AC GR + + + ++ P++ ++D+ G L+EA D+ +M
Sbjct: 309 IASLLPACGDLSALFLGRRLHKYIEKG-NLRPNLLLENALLDMYAKCGCLEEARDVFDKM 367
Query: 304 RVKPDPGVWGALLNS 318
R++ D W +++++
Sbjct: 368 RLR-DVVSWTSMMSA 381
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/538 (39%), Positives = 314/538 (58%), Gaps = 34/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+AT L+ +YS + A LF +L WN ++ Y + A+EL+ + + G
Sbjct: 1043 VATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSG 1102
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
D T A KAC L +++G++IH I+ +++D+ V + ++DMY KC +VNA
Sbjct: 1103 EKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAG 1162
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
VF+ I D P E T T+I AS+ +
Sbjct: 1163 IVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVT 1222
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL QGR+LH + + V T+LVDMYAKCG ++ A LF+++ + + WNAM+
Sbjct: 1223 ALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLV 1282
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G A HG++ +A++LF+ MK ++PD ++F+G+LSACS GL E + SM DY I+
Sbjct: 1283 GLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIE 1342
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY+C+VD LG +G + EA +I M K + ALL +C++ G V+ + +
Sbjct: 1343 PEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAAR 1402
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L LEP D+ YV+LSNIYA A W+ V RK+M + +KK SWI+VKN H F+
Sbjct: 1403 LFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVV 1462
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
D SHP D IY K++ + ++E GYVP TE V DVE++EK + HSE+LAIA+GL
Sbjct: 1463 DDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGL 1522
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I+TP T + + KNL++C DCH AIK+ISK+ EREI +RD NR+HHF+DG+CSCGDYW
Sbjct: 1523 ISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 1580
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 161/333 (48%), Gaps = 26/333 (7%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + ++ LV++YS C + +A LFD + +R++ LWN++++ Y G + A +L
Sbjct: 756 IGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQL 815
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR-------NKWETDVFVGAA 113
+ GL PD F+ L S ++ +EG+ + + V + DVF
Sbjct: 816 FSEFHRSGLRPDEFSVQLILNGVSEVN-WDEGKWLADQVQAYAAKLSLSDDNPDVFCWNK 874
Query: 114 LI-------DMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGF 166
+ D + C VN L D TL+ V++A A L G+++HG
Sbjct: 875 KLSECLWAGDNWGAIECFVNMNG-----LNIDYDAVTLLVVLAAVAGTDDLELGKQVHGI 929
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ + + +V V +LV+MY+K G AR +F ++ ++SWN+MI+ A ++
Sbjct: 930 AVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEES 989
Query: 227 LDLF-EKMKDEVQPDHITFVGVLSACSR--GGLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
++LF + + + ++PDH T VL ACS GL ++ ++ D V T +
Sbjct: 990 VNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVA--TTL 1047
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
+D+ SG+++EA + + Q + D W A++
Sbjct: 1048 IDVYSKSGKMEEA-EFLFQNKDDLDLACWNAMM 1079
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 40/209 (19%)
Query: 92 GRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------------- 138
G+ H ++ + D F+ L+ MY+KC + +ARQVFD ERD
Sbjct: 640 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 699
Query: 139 -------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFE 173
+ TL V+ + L +HG++ + E
Sbjct: 700 SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLE 759
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
+V V ALV++Y+KCG ++ AR LF+ +RE+ VV WN M+ GY G +A LF +
Sbjct: 760 WDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEF 819
Query: 234 -KDEVQPDHITFVGVLSACSRGGLFDEGR 261
+ ++PD + +L+ S +DEG+
Sbjct: 820 HRSGLRPDEFSVQLILNGVSEVN-WDEGK 847
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 71/136 (52%), Gaps = 7/136 (5%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAW-----NGPYEVAIELYYR 63
L+ L+ +YS C L +A Q+FD P+R+L WN ++ AYA +G + + L +R
Sbjct: 658 LSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHL-FR 716
Query: 64 LLEIGL-VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
LL L T LK C + +H I+ E DVFV AL+++Y+KC
Sbjct: 717 LLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCG 776
Query: 123 CVVNARQVFDKILERD 138
+ +AR +FD + ERD
Sbjct: 777 RMRDARLLFDWMRERD 792
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P + T LV +Y+ C + +A++LF ++ RN+ LWN ++ A +G E A+ L+ +
Sbjct: 1243 PFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKS 1302
Query: 67 IGLVPDNFTFPFALKACSALSAIEEG-RRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G+ PD +F L ACS E +H E ++ + L+D + V
Sbjct: 1303 HGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLV- 1361
Query: 126 NARQVFDKILERDPSEAT 143
Q DK++E P +A+
Sbjct: 1362 ---QEADKVIETMPFKAS 1376
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 24/163 (14%)
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMH-----GHSTKALDLFEKMKDE 236
L+ MY+KCG + AR +F+ E+ +V+WNA++ YA G++ + L LF ++
Sbjct: 662 LLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRAS 721
Query: 237 V-QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQH----YTCMVDLLGHSG 291
+ +T VL C + G ++ V Y I ++ +V++ G
Sbjct: 722 LGSTTRMTLAPVLKLC-----LNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCG 776
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
R+ +A L MR + D +W +L G+V +L LEK
Sbjct: 777 RMRDARLLFDWMRER-DVVLWNMMLK-----GYV---QLGLEK 810
>gi|356529748|ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 604
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/522 (40%), Positives = 313/522 (59%), Gaps = 35/522 (6%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +F +I + F +N +IR + E A+ LY +LE G+ PDNFT+PF LKACS
Sbjct: 83 ACSIFRQIEEPGSFEYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYPFVLKACSL 142
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
L A++EG +IH V + E DVFV LI+MY KC + +A VF+++ E+
Sbjct: 143 LGALKEGVQIHAHVFKAGLEGDVFVQNGLINMYGKCGAIEHASVVFEQMDEKSVASWSSI 202
Query: 139 ---------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHR 171
E+ LV+ +SA + + GR +HG R+
Sbjct: 203 IGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNFGRCIHGILLRNI 262
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
ELNV VKT+L+DMY K G ++ +F+ + +K S+ +ITG A+HG +AL +F
Sbjct: 263 SELNVAVKTSLIDMYVKSGSLEKGLCVFQNMAQKNRYSYTVIITGLAIHGRGREALSVFS 322
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
M +E + PD + +VGVLSACS GL +EG F + ++ I P++QHY CMVDL+G +
Sbjct: 323 DMLEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFNRLQFEHKIKPTIQHYGCMVDLMGRA 382
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
G L A DLI M +KP+ VW +LL++CK+H ++++ E+A E + +L H+ G+Y++L+
Sbjct: 383 GMLKGAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEIGEIAAENIFKLNQHNPGDYLVLA 442
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
N+YARA W VA++R M ++ + ++ S +E + F+S D S P C+ IY ++
Sbjct: 443 NMYARAKKWADVARIRTEMAEKHLVQTPGFSLVEANRNVYKFVSQDKSQPQCETIYDMIQ 502
Query: 411 WLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLK 470
+E ++K GY P V DV+ DEK + HS++LAIAF LI T +G+R+ I++N++
Sbjct: 503 QMEWQLKFEGYTPDMSQVLLDVDEDEKRQRLKHHSQKLAIAFALIQTSEGSRIRISRNIR 562
Query: 471 ICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+C+DCH KFIS I EREITVRD NR+HHFKDG CSC DYW
Sbjct: 563 MCNDCHTYTKFISVIYEREITVRDRNRFHHFKDGTCSCKDYW 604
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T L+ +Y L +F + Q+N + + V+I A +G A+ ++ +LE G
Sbjct: 269 VKTSLIDMYVKSGSLEKGLCVFQNMAQKNRYSYTVIITGLAIHGRGREALSVFSDMLEEG 328
Query: 69 LVPDNFTFPFALKACSALSAIEEG 92
L PD+ + L ACS + EG
Sbjct: 329 LAPDDVVYVGVLSACSHAGLVNEG 352
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 3/133 (2%)
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFV 245
++ G ++ A ++F Q+ E +N MI G + +AL L+ E ++ ++PD+ T+
Sbjct: 75 SRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMNLEEALLLYVEMLERGIEPDNFTYP 134
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
VL ACS G EG + + V ++ V ++++ G G ++ A + QM
Sbjct: 135 FVLKACSLLGALKEG-VQIHAHVFKAGLEGDVFVQNGLINMYGKCGAIEHASVVFEQMDE 193
Query: 306 KPDPGVWGALLNS 318
K W +++ +
Sbjct: 194 K-SVASWSSIIGA 205
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/537 (39%), Positives = 322/537 (59%), Gaps = 35/537 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+HLY C + +A ++FD +P R++ W LI YA N + A+ L +L
Sbjct: 101 LDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGR 160
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P+ FTF LKA A ++ G +IH ++ W DV+VG+AL+DMYA+C + A
Sbjct: 161 FKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAI 220
Query: 129 QVFDKI------------------------------LERDPSEATLVT---VISASADIA 155
VFD++ ++R+ EAT T V SA A I
Sbjct: 221 AVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIG 280
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL QG+ +H + L+ V ++DMYAK G + AR +F+++ +K VV+WN+M+T
Sbjct: 281 ALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLT 340
Query: 216 GYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
+A +G +A+ FE+M+ V + ITF+ +L+ACS GGL EG+ +F+ M+++Y+++
Sbjct: 341 AFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFD-MMKEYNLE 399
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P + HY +VDLLG +G L++A I +M +KP VWGALL SC++H + K+ + A +
Sbjct: 400 PEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADH 459
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
+ EL+P D G V+L NIYA W+ A++RK+M G+KK ACSW+E++N H F++
Sbjct: 460 VFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVA 519
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
D +HP +EIY K + + ++++AGYVP T+ V V+ E+ + HSE++A+AF L
Sbjct: 520 NDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFAL 579
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
IN P G + I KN++IC DCH A ++ISK+ +REI VRD NR+HHF G CSCGDY
Sbjct: 580 INMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSCGDY 636
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 140/290 (48%), Gaps = 36/290 (12%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
+ AC+ ++++ R IH + +++ VF+ +LI +Y KC V +AR+VFD + RD
Sbjct: 71 ITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDM 130
Query: 139 ---------------PSEA-----------------TLVTVISASADIAALPQGRELHGF 166
P EA T +++ A+ A+ G ++H
Sbjct: 131 CSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHAL 190
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ ++ + +V V +AL+DMYA+CG + +A +F+QL K VSWNA+I G+A G
Sbjct: 191 TVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETT 250
Query: 227 LDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
L +F +M ++ + H T+ V SA + G ++G+ M++ + T ++D
Sbjct: 251 LLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNT-ILD 309
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+ SG + +A + ++ K D W ++L + +G + A E++
Sbjct: 310 MYAKSGSMIDARKVFDRVD-KKDVVTWNSMLTAFAQYGLGREAVTHFEEM 358
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 7/174 (4%)
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
++I+A A +L R +H +F +V + +L+ +Y KCG V AR +F+ + +
Sbjct: 69 SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
+ SW ++I GYA + +AL L M + +P+ TF +L A G
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188
Query: 265 ESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV-WGALL 316
V+ D+H D V + ++D+ GR+D A + Q+ K GV W AL+
Sbjct: 189 ALTVKYDWHDDVYVG--SALLDMYARCGRMDMAIAVFDQLESK--NGVSWNALI 238
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/505 (41%), Positives = 305/505 (60%), Gaps = 34/505 (6%)
Query: 42 NVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR 101
N +IR Y + ++ ++ + + ++PD+ TFP LKA + L G+ IH VI+
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117
Query: 102 NKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----------------------- 138
+ DV+ AL+ +Y C + +A Q+FD++ ER+
Sbjct: 118 MGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDA 177
Query: 139 ----------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
PSE T+V V+SA + + A QG+ +H F + +R LNV V TAL+DMYAK
Sbjct: 178 FRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAK 237
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGV 247
CG V +FE++REK V +WN +I+GYAM+G AL F +M + +PD +TF+GV
Sbjct: 238 CGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGV 297
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
L AC GL EGR F SM + + + P ++HY CMVDLLG +G L+EA +LI M ++P
Sbjct: 298 LCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEP 357
Query: 308 DPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRK 367
DP +W ALL +C++HG+ KL E +++LIELEP++ NYV+LSNIY+R W V KLR
Sbjct: 358 DPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRG 417
Query: 368 LMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTES 427
+M RGI+K CS IE+ N + F++ + P + IY +L L ++KE GYV GT+
Sbjct: 418 MMSLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTDM 477
Query: 428 VFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITE 487
+D+E +EK + + HSE+LA+AFGL+N+P L I KNL+IC DCH K +S + +
Sbjct: 478 ALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVYK 537
Query: 488 REITVRDVNRYHHFKDGICSCGDYW 512
R I VRD NR+HHF +G CSC DYW
Sbjct: 538 RYIVVRDRNRFHHFYEGFCSCRDYW 562
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 130/277 (46%), Gaps = 38/277 (13%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MGF +T LVHLY C + +A QLFD +P+RN WN LI Y N + AI+
Sbjct: 118 MGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDA 177
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ +L G P T L ACS L A +G+ IHE + N+ +VFVG ALIDMYAK
Sbjct: 178 FRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAK 237
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C V +VF++I E++ P E T + V
Sbjct: 238 CGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGV 297
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVK--TALVDMYAKCGLVKVARNLFEQLR-E 204
+ A + +GR S + +F L +++ +VD+ + GL++ A L + + E
Sbjct: 298 LCACCHQGLVTEGR-WQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIE 356
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDH 241
+ W A++ +HG +TK + K E++P++
Sbjct: 357 PDPIIWRALLCACRVHG-NTKLGEYIIKRLIELEPNN 392
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/541 (39%), Positives = 312/541 (57%), Gaps = 35/541 (6%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
+ V+ L+ AC + +A QLF R +++ W +I+ A NG + AIE + +
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLF-RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
GL D + F L AC L AI EG++IH +IR ++ ++VG+ALIDMY KC C+
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLH 322
Query: 126 NARQVFDKILER---------------------------------DPSEATLVTVISASA 152
A+ VFD++ ++ DP TL ISA A
Sbjct: 323 YAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACA 382
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
++++L +G + HG + V V +LV +Y KCG + + LF ++ + VSW A
Sbjct: 383 NVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTA 442
Query: 213 MITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
M++ YA G + + + LF+KM + ++PD +T GV+SACSR GL ++G+ +F+ M +Y
Sbjct: 443 MVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEY 502
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
I PS+ HY+CM+DL SGRL+EA I M PD W LL++C+ G++++ + A
Sbjct: 503 GIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWA 562
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHA 391
E LIEL+PH Y +LS+IYA W+ VA+LR+ M ++ +KK SWI+ K K H+
Sbjct: 563 AESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHS 622
Query: 392 FLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIA 451
F + D S P D+IYAKL+ L ++ + GY P T V HDVE K M+ HSERLAIA
Sbjct: 623 FSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIA 682
Query: 452 FGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
FGLI P G + + KNL++C DCH A K IS +T REI VRD R+H FKDG CSCGD+
Sbjct: 683 FGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDF 742
Query: 512 W 512
W
Sbjct: 743 W 743
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 151/317 (47%), Gaps = 16/317 (5%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F H + + L+ +Y C CLH A +FDR+ Q+N+ W ++ Y G E A++++
Sbjct: 301 FQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFL 360
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+ G+ PD++T A+ AC+ +S++EEG + H I + V V +L+ +Y KC
Sbjct: 361 DMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCG 420
Query: 123 CVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
+ ++ ++F+++ RD T ++SA A + +L +H + + T +
Sbjct: 421 DIDDSTRLFNEMNVRDAVSWT--AMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGV 478
Query: 183 VDMYAKCGLVKVARNLFEQLREK-----RVVSWNAMITGYAMHGHSTKALDLFEKMKDEV 237
+ ++ GLV+ + F+ + + + ++ MI ++ G +A+ M
Sbjct: 479 ISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGM--PF 536
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP-SVQHYTCMVDLLGHSGRLDEA 296
PD I + +LSAC G + G+ ES++ +DP YT + + G+ D
Sbjct: 537 PPDAIGWTTLLSACRNKGNLEIGKWAAESLI---ELDPHHPAGYTLLSSIYASKGKWDSV 593
Query: 297 CDLIMQMR---VKPDPG 310
L MR VK +PG
Sbjct: 594 AQLRRGMREKNVKKEPG 610
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 143/342 (41%), Gaps = 73/342 (21%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-EIGLVP 71
L+ YS + F+++P R+ WNVLI Y+ +G A++ Y ++ +
Sbjct: 78 LLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANL 137
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
T LK S+ + G++IH VI+ +E+ + VG+ L+ MYA C+ +A++VF
Sbjct: 138 TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVF 197
Query: 132 DKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGL 191
+ +R N + +L+ CG+
Sbjct: 198 YGLDDR-------------------------------------NTVMYNSLMGGLLACGM 220
Query: 192 VKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSA 250
++ A LF + EK VSW AMI G A +G + +A++ F +MK + ++ D F VL A
Sbjct: 221 IEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPA 279
Query: 251 CSRGGLFDEGRMFFESMVR------------------------------DYHIDPSVQHY 280
C G +EG+ ++R D +V +
Sbjct: 280 CGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSW 339
Query: 281 TCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWGALLNSC 319
T MV G +GR +EA + + M+ + PD G +++C
Sbjct: 340 TAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 112/248 (45%), Gaps = 20/248 (8%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + ++ LV LY C + ++ +LF+ + R+ W ++ AYA G I+L+
Sbjct: 401 GLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLF 460
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMYA 119
++++ GL PD T + ACS +E+G+R + ++ +++ +G + +ID+++
Sbjct: 461 DKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFK-LMTSEYGIVPSIGHYSCMIDLFS 519
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELN---V 176
+ + A + F + P T++SA + L G+ ++ EL+
Sbjct: 520 RSGRLEEAMR-FINGMPFPPDAIGWTTLLSACRNKGNLEIGK----WAAESLIELDPHHP 574
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRV--------VSWNAMITGYAMHGHSTKALD 228
T L +YA G L +REK V + W + ++ S+ LD
Sbjct: 575 AGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLD 634
Query: 229 -LFEKMKD 235
++ K+++
Sbjct: 635 QIYAKLEE 642
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/522 (40%), Positives = 315/522 (60%), Gaps = 35/522 (6%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +F +I Q F +N +IR Y E A+ LYY +LE G+ DNFT+P KAC++
Sbjct: 38 ACSIFRQIDQPGTFEFNTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALFKACAS 97
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
L +IEEG +IH + + E D+FV +LI+MY KC + + VF+ + RD
Sbjct: 98 LRSIEEGMQIHGYIFKRGLEGDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAI 157
Query: 139 ---------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHR 171
P E+ LV+V+SA + AL GR H R+
Sbjct: 158 IAAHASLGMWSECLSVFGEMSREGSCRPEESILVSVLSACTHLGALDLGRCTHVTLLRNI 217
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
E+NV V+T+L+DMY KCG ++ +LF+++ +K +S++ MITG AMHG +AL +F
Sbjct: 218 REMNVIVQTSLIDMYVKCGCIEKGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFS 277
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
M +E ++PD + ++GVLSAC+ GL DEG F M ++ I+P++QHY C+V L+G +
Sbjct: 278 DMLEEGLKPDDVVYLGVLSACNHAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRA 337
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
G L++A + I M +KP+ VW LL++CK H ++++ E+A + L EL + G+YV+LS
Sbjct: 338 GMLNKALEHIRSMPIKPNEVVWRGLLSACKFHHNLEIGEIAAKSLGELNSSNPGDYVVLS 397
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
N+YARA WE VAK+R M +G ++ S ++V+ K + F+S D SHP C +Y +
Sbjct: 398 NMYARAKRWEDVAKIRTEMARKGFTQTPGFSLVQVERKIYKFVSQDMSHPQCKGMYEMIH 457
Query: 411 WLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLK 470
+E ++K GY P T V DV+ +EK + HS++LA+AF LI+T G + I +NL+
Sbjct: 458 QMEWQLKFEGYSPDTSQVLFDVDEEEKRQRLKAHSQKLAMAFALIHTSQGAPIRIARNLR 517
Query: 471 ICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+C+DCH K IS I +REITVRD NR+HHFKDG CSC DYW
Sbjct: 518 MCNDCHTYTKLISVIYQREITVRDRNRFHHFKDGTCSCRDYW 559
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++ T L+ +Y C C+ LF R+ ++N ++V+I A +G A++++ +LE
Sbjct: 223 IVQTSLIDMYVKCGCIEKGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEE 282
Query: 68 GLVPDNFTFPFALKACSALSAIEEG 92
GL PD+ + L AC+ ++EG
Sbjct: 283 GLKPDDVVYLGVLSACNHAGLVDEG 307
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 5/129 (3%)
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVL 248
G + A ++F Q+ + +N MI GY + AL L+ +M + V+ D+ T+ +
Sbjct: 33 GSMDYACSIFRQIDQPGTFEFNTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALF 92
Query: 249 SACSRGGLFDEGRMFFESMV-RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
AC+ +EG + R D VQ+ ++++ G G+++ +C + M +
Sbjct: 93 KACASLRSIEEGMQIHGYIFKRGLEGDLFVQN--SLINMYGKCGKIELSCSVFEHMD-RR 149
Query: 308 DPGVWGALL 316
D W A++
Sbjct: 150 DVASWSAII 158
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/523 (42%), Positives = 320/523 (61%), Gaps = 37/523 (7%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWN-GPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
A LFD + + ++ ++N + R Y+ + P EV L+ +LE L+PDN+TFP LKAC+
Sbjct: 84 ARHLFDAMSEPDIVIFNSIARGYSRSTNPLEV-FNLFVEILEDDLLPDNYTFPSLLKACA 142
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER------- 137
A+EEGR++H ++ + +V+V LI+MY +C V AR VFD+I+E
Sbjct: 143 VAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNA 202
Query: 138 --------------------------DPSEATLVTVISASADIAALPQGRELHGFSWRHR 171
P+E TL++V+S+ A + +L G+ +H ++ +H
Sbjct: 203 MITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHG 262
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
F VKV TAL+DM+AKCG + A ++FE +R K +W+AMI YA HG + ++ +FE
Sbjct: 263 FCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFE 322
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+M+ E VQPD ITF+G+L+ACS GL +EGR +F MV ++ I PS++HY MVDLLG +
Sbjct: 323 RMRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRA 382
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
G L++A + I ++ + P P +W LL +C H +++LAE E+++EL+ G+YVILS
Sbjct: 383 GHLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLELAEKVSERILELDDSHGGDYVILS 442
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
N+YAR WE V LRK+M DR K CS IEV N H F SGD +++ L
Sbjct: 443 NLYARNKKWEAVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALD 502
Query: 411 WLEGRMKEAGYVPGTESVFH-DVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNL 469
+ +K AGYVP T V H D+ + EK + HSE+LAIAFGL+NTP GT + + KNL
Sbjct: 503 EMVKELKLAGYVPDTSMVVHADMGDQEKEITLRYHSEKLAIAFGLLNTPPGTTIRVVKNL 562
Query: 470 KICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++C DCH A K IS I R++ +RDV R+HHF+DG CSC D+W
Sbjct: 563 RVCRDCHSAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCRDFW 605
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 119/262 (45%), Gaps = 43/262 (16%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+++Y+ C+ + A +FDRI + + +N +I YA A+ L+ + L P+
Sbjct: 172 LINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPN 231
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
T L +C+ L +++ G+ IHE ++ + V V ALIDM+AKC + +A +F+
Sbjct: 232 EITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFE 291
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
+ +D P E T + +++A + + +
Sbjct: 292 NMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLLNACSHTGLVEE 351
Query: 160 GRELHGFSWR-HRFEL--NVKVKTALVDMYAKCGLVKVARNLFEQLR-EKRVVSWNAMIT 215
GRE FSW H F + ++K ++VD+ + G ++ A ++L + W ++
Sbjct: 352 GREY--FSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTPMLWRILLA 409
Query: 216 GYAMHGHSTKALDLFEKMKDEV 237
+ H + L+L EK+ + +
Sbjct: 410 ACSSHNN----LELAEKVSERI 427
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + T L+ +++ C L +A +F+ + ++ W+ +I AYA +G E ++ ++
Sbjct: 262 GFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMF 321
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
R+ + PD TF L ACS +EEGR
Sbjct: 322 ERMRSENVQPDEITFLGLLNACSHTGLVEEGR 353
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/539 (38%), Positives = 325/539 (60%), Gaps = 36/539 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL ++++Y+ C L A LFD++P +++ W VLI Y+ +G A+ L+ ++L +
Sbjct: 141 VLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHL 200
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G P+ FT LKA + GR++H ++ ++ +V VG++L+DMYA+ + + A
Sbjct: 201 GFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREA 260
Query: 128 RQVFDKILER---------------------------------DPSEATLVTVISASADI 154
+ +F+ + + +P+ T +V+ A A
Sbjct: 261 KVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASS 319
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
+L QG+ +H + + + L+DMYAK G +K A+ +F +L ++ +VSWN++I
Sbjct: 320 GSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSII 379
Query: 215 TGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+GYA HG +AL LFE+M K +VQP+ ITF+ VL+ACS GL DEG+ +FE +++ + I
Sbjct: 380 SGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFE-LMKKHKI 438
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
+ V H+ +VDLLG +GRL+EA I +M +KP VWGALL +C++H ++ L A E
Sbjct: 439 EAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAE 498
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
++ EL+PHD+G +V+LSNIYA A AK+RK+M + G+KK ACSW+E++N+ H F+
Sbjct: 499 QIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFV 558
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
+ D SHP +EI + + G++KE GYVP T V + ++ + HSE+LA+AF
Sbjct: 559 ANDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFA 618
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++ TP G + I KN++IC DCH A KF S++ REI VRD NR+HHF G+CSC DYW
Sbjct: 619 VLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 92/193 (47%), Gaps = 8/193 (4%)
Query: 138 DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
+P +++ + L QGR +H FE ++ + +++MYAKCG ++ A++
Sbjct: 102 EPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQD 161
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGL 256
LF+++ K +VSW +I+GY+ G +++AL LF KM QP+ T +L A G
Sbjct: 162 LFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPS 221
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
GR ++ Y D +V + ++D+ + EA +I + W AL+
Sbjct: 222 DHHGRQLHAFSLK-YGYDMNVHVGSSLLDMYARWAHMREA-KVIFNSLAAKNVVSWNALI 279
Query: 317 NSCKLHGHVKLAE 329
GH + E
Sbjct: 280 A-----GHARKGE 287
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/539 (40%), Positives = 314/539 (58%), Gaps = 52/539 (9%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
++ Y+ + A QLFD P ++F W ++ Y N E A EL+ R+ E V
Sbjct: 251 IITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSW 310
Query: 73 NFTFPFALKACSALSAIEEGRRIHE-----DVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
N + L+ +G R+ DV+ + +V +I YA+C + A
Sbjct: 311 N----------AMLAGYVQGERVEMAKELFDVMPCR---NVSTWNTMITGYAQCGKISEA 357
Query: 128 RQVFDKILERDP---------------------------------SEATLVTVISASADI 154
+ +FDK+ +RDP + ++ + +S AD+
Sbjct: 358 KNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADV 417
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
AL G++LHG + +E V AL+ MY KCG ++ A +LF+++ K +VSWN MI
Sbjct: 418 VALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMI 477
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
GY+ HG +AL FE MK E ++PD T V VLSACS GL D+GR +F +M +DY +
Sbjct: 478 AGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGV 537
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P+ QHY CMVDLLG +G L+EA +L+ M +PD +WG LL + ++HG+ +LAE A +
Sbjct: 538 RPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAAD 597
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
K+ +EP ++G YV+LSN+YA + W V KLR M D+G+KK SWIE++NK H F
Sbjct: 598 KIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFS 657
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD HP DEI+A L+ L+ RMK+AGYV T V HDVE +EK M+ HSERLA+A+G
Sbjct: 658 VGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYG 717
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++ G + + KNL++C+DCH AIK+++K+T R I +RD NR+HHFKDG CSCGDYW
Sbjct: 718 IMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIILRDNNRFHHFKDGSCSCGDYW 776
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 164/369 (44%), Gaps = 52/369 (14%)
Query: 17 YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTF 76
Y+ C+ +A ++FDR+P++N WN L+ AY N E A L+ LV N
Sbjct: 162 YAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLL 221
Query: 77 PFALKACSALSAIEEGRRIHEDV-IRN--KWET------------------------DVF 109
+K I E R+ + + +R+ W T DVF
Sbjct: 222 GGFVKK----KKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVF 277
Query: 110 VGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWR 169
A++ Y + V AR++FD++ ER+ +S +A +A QG + +
Sbjct: 278 TWTAMVSGYIQNRMVEEARELFDRMPERNE--------VSWNAMLAGYVQGERVE--MAK 327
Query: 170 HRFEL----NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
F++ NV ++ YA+CG + A+NLF+++ ++ VSW AMI GY+ GHS +
Sbjct: 328 ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYE 387
Query: 226 ALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCM 283
AL LF M+ E + + +F LS C+ + G+ +V+ Y V + +
Sbjct: 388 ALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGN--AL 445
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPH 341
+ + G ++EA DL +M K D W ++ HG + A E + L+P
Sbjct: 446 LLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPD 504
Query: 342 DAGNYVILS 350
DA +LS
Sbjct: 505 DATMVAVLS 513
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 146/342 (42%), Gaps = 49/342 (14%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A ++F R+P+ + +N +I Y NG +E+A L+ + E LV N ++ +
Sbjct: 78 ALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNL 137
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLV 145
A E R+ E DV ++ YA+ CV +AR+VFD++ E++ + +
Sbjct: 138 GKARELFERMPE--------RDVCSWNTILSGYAQNGCVDDARRVFDRMPEKN--DVSWN 187
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
++SA + L + L G R + L+ + K + AR F+ ++ +
Sbjct: 188 ALLSAYVQNSKLEEACVLFG----SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVR 243
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDH--ITFVGVLSACSRGGLFDEGRMF 263
VVSWN +ITGYA +G +A LF++ P H T+ ++S + + +E R
Sbjct: 244 DVVSWNTIITGYAQNGEIDEARQLFDE-----SPVHDVFTWTAMVSGYIQNRMVEEAREL 298
Query: 264 FESMVRDYHID--------------------------PSVQHYTCMVDLLGHSGRLDEAC 297
F+ M + +V + M+ G++ EA
Sbjct: 299 FDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAK 358
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
+L +M K DP W A++ GH A L L L+E E
Sbjct: 359 NLFDKM-PKRDPVSWAAMIAGYSQSGHSYEA-LRLFVLMERE 398
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
++K + Y + G A +F+++ VS+NAMI+GY +G A LF++M
Sbjct: 58 DIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMP 117
Query: 235 DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLD 294
+ D +++ ++ R + R FE M + V + ++ +G +D
Sbjct: 118 ER---DLVSWNVMIKGYVRNRNLGKARELFERMP-----ERDVCSWNTILSGYAQNGCVD 169
Query: 295 EACDLIMQMRVKPDPGVWGALLNS 318
+A + +M K D W ALL++
Sbjct: 170 DARRVFDRMPEKNDVS-WNALLSA 192
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/569 (38%), Positives = 322/569 (56%), Gaps = 69/569 (12%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-EIGLVP 71
L+ LY A F+++P R++ WN +I Y+ G A+ ++ ++L E L P
Sbjct: 214 LISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKP 273
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV------- 124
DNFT L AC+ L + G++IH ++R + ET VG ALI MYAK V
Sbjct: 274 DNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIV 333
Query: 125 -------VN-------------------ARQVFDKILERD-------------------- 138
+N AR++F+K+ +RD
Sbjct: 334 EHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDA 393
Query: 139 -------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
P+ TL ++S S+ + L G+++H + + V AL+ M
Sbjct: 394 LELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAM 453
Query: 186 YAKCGLVKVARNLFEQLR-EKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHIT 243
YAK G + VA+ +F+ +K +VSW +MI A HG +A++LFE+M ++PDHIT
Sbjct: 454 YAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHIT 513
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
+VGVLSAC+ GL ++GR ++ M + I+P++ HY CM+DL G +G L EA I M
Sbjct: 514 YVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESM 573
Query: 304 RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVA 363
++PD WG+LL SCK+H + LA++A E+L+ ++P ++G Y+ L+N+Y+ WE A
Sbjct: 574 PIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAA 633
Query: 364 KLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVP 423
+ RKLM DRG++K SWI +KN+ HAF D HP DEIY + + +K+ G++P
Sbjct: 634 QTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIP 693
Query: 424 GTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFIS 483
TESV HD+E + K ++ HSE+LAIAFGL+NTP+ T L I KNL++C+DCH AIKFIS
Sbjct: 694 DTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAIKFIS 753
Query: 484 KITEREITVRDVNRYHHFKDGICSCGDYW 512
K+ REI VRD R+HHFKDG CSC DYW
Sbjct: 754 KLVGREIIVRDATRFHHFKDGSCSCRDYW 782
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 174/402 (43%), Gaps = 81/402 (20%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+ Y+ L AH +FD +P ++ F WN LI YA G +EV+ L Y +
Sbjct: 47 LMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEM---- 102
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
PD C +S W T + VG Y + NA
Sbjct: 103 --PD----------CDPVS----------------W-TAIIVG------YNQFGLFDNAI 127
Query: 129 QVFDKILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
+F K++ PS+ T+ V+S+ A L GR++H F + V V T+L++MY
Sbjct: 128 WMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMY 187
Query: 187 AKCG---LVKV----------------------------ARNLFEQLREKRVVSWNAMIT 215
AKCG + KV A + FE++ ++ +VSWN+MI+
Sbjct: 188 AKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMIS 247
Query: 216 GYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
GY+ G++ +AL +F KM +E ++PD+ T +LSAC+ + G+ ++R
Sbjct: 248 GYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRA-ET 306
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGHVKLAELA 331
+ S ++ + SG + E LI++ + + + +LL+ G+VK A
Sbjct: 307 ETSGAVGNALISMYAKSGGV-EIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREI 365
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRG 373
K L D + + Y + W +L +LM++ G
Sbjct: 366 FNK---LRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEG 404
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 112/274 (40%), Gaps = 43/274 (15%)
Query: 65 LEIGLVPDNFTFPFA--LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+E+G P + F FA L+ + GR +H +I+ V++ L+ YAK
Sbjct: 1 MEVGNSPTSSEF-FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTG 59
Query: 123 CVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
+ A VFD++ P ++T FSW L
Sbjct: 60 SLRFAHHVFDEM----PLKST----------------------FSW-----------NTL 82
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDH 241
+ YAK G +V+R L ++ + VSW A+I GY G A+ +F KM E V P
Sbjct: 83 ISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQ 142
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
T VLS+C+ D GR S V + V T ++++ G A +
Sbjct: 143 FTVSNVLSSCAANQTLDIGRK-IHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFD 201
Query: 302 QMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+M VK + W AL++ G +LA EK+
Sbjct: 202 RMTVK-NISTWNALISLYMQSGQFELAASQFEKM 234
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 104/231 (45%), Gaps = 10/231 (4%)
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ S I GR +H + L V + L+ YAK G ++ A ++F+++ K
Sbjct: 16 ILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKS 75
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
SWN +I+GYA G+ + L +M D D +++ ++ ++ GLFD F
Sbjct: 76 TFSWNTLISGYAKQGNFEVSRRLLYEMPD---CDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLD---EACDLIMQMRVKPDPGVWGALLNSCKLHG 323
M+ + + PS + ++ + LD + ++++ + V +LLN G
Sbjct: 133 MISE-RVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCG 191
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
+A++ +++ + + L ++Y ++ +E A + M DR I
Sbjct: 192 DPVIAKVVFDRMT---VKNISTWNALISLYMQSGQFELAASQFEKMPDRDI 239
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/505 (41%), Positives = 305/505 (60%), Gaps = 34/505 (6%)
Query: 42 NVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR 101
N +IR Y + ++ ++ + + ++PD+ TFP LKA + L G+ IH VI+
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117
Query: 102 NKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----------------------- 138
+ DV+ AL+ +Y C + +A Q+FD++ ER+
Sbjct: 118 MGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDA 177
Query: 139 ----------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
PSE T+V V+SA + + A QG+ +H F + +R LNV V TAL+DMYAK
Sbjct: 178 FRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAK 237
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGV 247
CG V +FE++REK V +WN +I+GYAM+G AL F +M + +PD +TF+GV
Sbjct: 238 CGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGV 297
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
L AC GL EGR F SM + + + P ++HY CMVDLLG +G L+EA +LI M ++P
Sbjct: 298 LCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIEP 357
Query: 308 DPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRK 367
DP +W ALL +C++HG+ KL E +++LIELEP++ NYV+LSNIY+R W V KLR
Sbjct: 358 DPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRG 417
Query: 368 LMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTES 427
+M RGI+K CS IE+ N + F++ + P + IY +L L ++KE GYV GT+
Sbjct: 418 MMNLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTDM 477
Query: 428 VFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITE 487
+D+E +EK + + HSE+LA+AFGL+N+P L I KNL+IC DCH K +S + +
Sbjct: 478 ALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVYK 537
Query: 488 REITVRDVNRYHHFKDGICSCGDYW 512
R I VRD NR+HHF +G CSC DYW
Sbjct: 538 RYIVVRDRNRFHHFYEGFCSCRDYW 562
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 130/277 (46%), Gaps = 38/277 (13%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MGF +T LVHLY C + +A QLFD +P+RN WN LI Y N + AI+
Sbjct: 118 MGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDA 177
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ +L G P T L ACS L A +G+ IHE + N+ +VFVG ALIDMYAK
Sbjct: 178 FRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAK 237
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C V +VF++I E++ P E T + V
Sbjct: 238 CGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGV 297
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVK--TALVDMYAKCGLVKVARNLFEQLR-E 204
+ A + +GR S + +F L +++ +VD+ + GL++ A L + + E
Sbjct: 298 LCACCHQGLVTEGR-WQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIE 356
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDH 241
+ W A++ +HG +TK + K E++P++
Sbjct: 357 PDPIIWRALLCACRVHG-NTKLGEYIIKRLIELEPNN 392
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/546 (39%), Positives = 314/546 (57%), Gaps = 35/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + +++ YS D + LFD +P+ + +NV+I +Y+ YE ++ +
Sbjct: 280 GFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFF 339
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ +G NF F L + LS+++ GR++H + ++ + VG +L+DMYAKC
Sbjct: 340 REMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKC 399
Query: 122 SCVVNARQVFDKILERDP---------------------------------SEATLVTVI 148
A +F + +R ++T TV+
Sbjct: 400 EMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVL 459
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
ASA A+L G++LH F R NV + LVDMYAKCG +K A +FE++ ++ V
Sbjct: 460 KASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAV 519
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNA+I+ +A +G A+ F KM + +QPD ++ +GVL+ACS G ++G +F++M
Sbjct: 520 SWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAM 579
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
Y I P +HY CM+DLLG +GR EA L+ +M +PD +W ++LN+C++H + L
Sbjct: 580 SPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSL 639
Query: 328 AELALEKLIELEP-HDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
AE A EKL +E DA YV +SNIYA A WE V ++K M +RGIKK A SW+EV
Sbjct: 640 AERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVN 699
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
+K H F S D +HPN DEI K+ L ++ GY P T SV DV+ K + HSE
Sbjct: 700 HKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSE 759
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
RLA+AF LI+TP+G +++ KNL+ C DCH AIK ISKI +REITVRD +R+HHF +G+C
Sbjct: 760 RLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVC 819
Query: 507 SCGDYW 512
SCGDYW
Sbjct: 820 SCGDYW 825
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 181/380 (47%), Gaps = 44/380 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDC--LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAI 58
+GF +P L V L S C+ L A LF+ IP+++ +N LI Y +G Y +I
Sbjct: 176 LGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESI 235
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
L+ ++ + G P +FTF LKA L G+++H + + D VG ++D Y
Sbjct: 236 HLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFY 295
Query: 119 AKCSCVVNARQVFDKILE---------------RDPSEATL------------------V 145
+K V+ R +FD++ E D EA+L
Sbjct: 296 SKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFA 355
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
T++S +A++++L GR+LH + + + V +LVDMYAKC + + A +F+ L ++
Sbjct: 356 TMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQR 415
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
VSW A+I+GY G L LF KM+ ++ D TF VL A + G+
Sbjct: 416 TTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLH 475
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLH 322
++R +++ +V + +VD+ G + +A + +M PD W AL+++ +
Sbjct: 476 AFIIRSGNLE-NVFSGSGLVDMYAKCGSIKDAVQVFEEM---PDRNAVSWNALISAHADN 531
Query: 323 GHVKLAELALEKLIE--LEP 340
G + A A K+IE L+P
Sbjct: 532 GDGEAAIGAFAKMIESGLQP 551
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 105/249 (42%), Gaps = 37/249 (14%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG--LVPDNFTFPFAL 80
+ +A LFD +P R + W +L+ YA N ++ A +L+ ++ +PD+ TF L
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVF--VGAALIDMYAKCSCVVNARQVFDKILERD 138
C+ ++H ++ ++T+ F V L+ Y + + A +F++I E+D
Sbjct: 155 PGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKD 214
Query: 139 ---------------------------------PSEATLVTVISASADIAALPQGRELHG 165
PS+ T V+ A + G++LH
Sbjct: 215 SVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHA 274
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
S F + V ++D Y+K V R LF+++ E VS+N +I+ Y+
Sbjct: 275 LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEA 334
Query: 226 ALDLFEKMK 234
+L F +M+
Sbjct: 335 SLHFFREMQ 343
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 97/234 (41%), Gaps = 50/234 (21%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +++D +P +N N +I + G A +L+ +PD + +
Sbjct: 67 ARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLF------DAMPDRTVVTWTI----- 115
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----PSE 141
L+ YA+ S A ++F ++ P
Sbjct: 116 ----------------------------LMGWYARNSHFDEAFKLFRQMCRSSSCTLPDH 147
Query: 142 ATLVTVISASADIAALPQGR--ELHGFSWRHRFELN--VKVKTALVDMYAKCGLVKVARN 197
T T++ D A+PQ ++H F+ + F+ N + V L+ Y + + +A
Sbjct: 148 VTFTTLLPGCND--AVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACV 205
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEV-QPDHITFVGVLSA 250
LFE++ EK V++N +ITGY G T+++ LF KM+ QP TF GVL A
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 70/165 (42%), Gaps = 40/165 (24%)
Query: 91 EGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISA 150
+ RR+ +I+ ++TD +++ + V AR+V+D++ P + T+ T
Sbjct: 31 DTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEM----PHKNTVST---- 82
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
++ + K G V AR+LF+ + ++ VV+W
Sbjct: 83 -----------------------------NTMISGHVKTGDVSSARDLFDAMPDRTVVTW 113
Query: 211 NAMITGYAMHGHSTKALDLFEKM---KDEVQPDHITFVGVLSACS 252
++ YA + H +A LF +M PDH+TF +L C+
Sbjct: 114 TILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCN 158
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 16/133 (12%)
Query: 137 RDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
R PS AT + A I + F+ + +V+ + G V AR
Sbjct: 22 RQPSPATFLDTRRVDARII-------------KTGFDTDTCRSNFIVEDLLRRGQVSAAR 68
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGL 256
+++++ K VS N MI+G+ G + A DLF+ M D +T+ ++ +R
Sbjct: 69 KVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTV---VTWTILMGWYARNSH 125
Query: 257 FDEGRMFFESMVR 269
FDE F M R
Sbjct: 126 FDEAFKLFRQMCR 138
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/545 (40%), Positives = 308/545 (56%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF H L T L+ L+S C + A LF I +++L N +I + NG E ++ L+
Sbjct: 61 GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
LL G + T + S IH ++ + V AL +Y +
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRL 180
Query: 122 SCVVNARQVFDKILER---------------------------------DPSEATLVTVI 148
+ ++ ARQ+FD+ E+ +P+ T+ +++
Sbjct: 181 NEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSIL 240
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A I AL G +H +RFE NV V TAL+DMYAKCG + VAR LF+ + EK V
Sbjct: 241 SACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEV 300
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WNAMI+GY +HGH +AL LF M V+P +TF+ VL ACS GL EG F +M
Sbjct: 301 TWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTM 360
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
V D+ +P +HY CMVD+LG +G+L +A + I M V+P P VWGALL +C +H L
Sbjct: 361 VHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNL 420
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
A +A EKL EL+P + G YV++SNIY+ + A +R++ + + K+ C+ IE+
Sbjct: 421 AHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQ 480
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
H F SGD SHP IYA+L L G+M EAG+ T +V HD+E +EK + HSE+
Sbjct: 481 VPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKVHSEK 540
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGLI+T G + I KNL++C DCH KF+SKIT+R I VRD NR+HHFKDG+CS
Sbjct: 541 LAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFKDGLCS 600
Query: 508 CGDYW 512
CGDYW
Sbjct: 601 CGDYW 605
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 120/264 (45%), Gaps = 25/264 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G H ++T L +Y + + A QLFD ++ L WN +I NG + AI L
Sbjct: 161 LGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISL 220
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + + + P+ T L AC+ + A+ G +H + N++E++V+V ALIDMYAK
Sbjct: 221 FQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAK 280
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRF--ELNVKV 178
C + AR++FD + E++ E T +IS G HG F L+ V
Sbjct: 281 CGSITVARELFDLMPEKN--EVTWNAMISG--------YGLHGHGQEALKLFYDMLSSSV 330
Query: 179 K----TALVDMYA--KCGLVKVARNLFEQLR-----EKRVVSWNAMITGYAMHGHSTKAL 227
K T L +YA GLVK +F + E + M+ G KAL
Sbjct: 331 KPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKAL 390
Query: 228 DLFEKMKDEVQPDHITFVGVLSAC 251
+ + M V+P + +L AC
Sbjct: 391 EFIKAMP--VEPGPPVWGALLGAC 412
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 136/298 (45%), Gaps = 40/298 (13%)
Query: 114 LIDMYAKCSCVVNARQVF-DKILERDP--SEATLVTVISASADIAALPQGRELHGFSWRH 170
+I + K SC ++ +VF D +L P T++ V+ A A++ L G ++ + +
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
F +V + T L+ +++KCG V++AR LF ++R+K ++S NAMI+G+ +G + ++ LF
Sbjct: 61 GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120
Query: 231 -EKMKDEVQPDHITFVGVLSA----------------CSRGGLFDEG------------- 260
E + + T VG++ C + G+
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRL 180
Query: 261 -RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWGALL 316
M F + D + ++ + M+ +G D A L M+ V P+P ++L
Sbjct: 181 NEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSIL 240
Query: 317 NSCKLHGHVKLAELALEKLIELEPHDAGNYV--ILSNIYARAANWEGVAKLRKLMIDR 372
++C G + L E + LI+ ++ YV L ++YA+ + +L LM ++
Sbjct: 241 SACAQIGALSLGEW-VHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEK 297
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/541 (40%), Positives = 315/541 (58%), Gaps = 35/541 (6%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
+ V+ L+ AC + +A QLF R +++ W+ +I+ A NG + AIE + +
Sbjct: 201 NTVMYNTLMGGLLACGMIEDALQLF-RGMEKDSVSWSAMIKGLAQNGMEKEAIECFREMK 259
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
GL D + F L AC L AI +GR+IH +IR + ++VG+ALIDMY KC C+
Sbjct: 260 IEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLH 319
Query: 126 NARQVFDKILER---------------------------------DPSEATLVTVISASA 152
A+ VFD++ ++ DP TL ISA A
Sbjct: 320 YAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACA 379
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+I++L +G + HG + + V +LV +Y KCG + + LF ++ + VSW A
Sbjct: 380 NISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTA 439
Query: 213 MITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
M++ YA G + +A+ LF+KM + ++PD +T GV+SACSR GL ++G+ +FE M+ +Y
Sbjct: 440 MVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEY 499
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
I PS HY+CM+DL SGR++EA I M +PD W LL++C+ G++++ + A
Sbjct: 500 GIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWA 559
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHA 391
E LIEL+PH Y +LS+IYA W+ VA+LR+ M ++ ++K SWI+ K K H+
Sbjct: 560 AESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHS 619
Query: 392 FLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIA 451
F + D S P D+IYAKL+ L ++ + GY P T V HDVE K M+ CHSERLAIA
Sbjct: 620 FSADDESSPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVEEAVKIKMLNCHSERLAIA 679
Query: 452 FGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
FGLI P G + + KNL++C DCH A K IS +T REI VRD R+H FKDG CSCGD+
Sbjct: 680 FGLIFVPSGLPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDF 739
Query: 512 W 512
W
Sbjct: 740 W 740
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 144/344 (41%), Gaps = 73/344 (21%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-EIGL 69
L+ YS L + F+++P R+ WNVLI Y+ +G A++ Y ++ +
Sbjct: 73 NNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSS 132
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
T LK S+ + G++IH VI+ +E+ + VG+ L+DMY+K C+ +A++
Sbjct: 133 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKK 192
Query: 130 VFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC 189
VF + +R N + L+ C
Sbjct: 193 VFYGLDDR-------------------------------------NTVMYNTLMGGLLAC 215
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVL 248
G+++ A LF + EK VSW+AMI G A +G +A++ F +MK E ++ D F VL
Sbjct: 216 GMIEDALQLFRGM-EKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVL 274
Query: 249 SACSRGGLFDEGRMFFESMVR------------------------------DYHIDPSVQ 278
AC G ++GR ++R D +V
Sbjct: 275 PACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 334
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWGALLNSC 319
+T MV G +GR EA + + M+ + PD G +++C
Sbjct: 335 SWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISAC 378
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/565 (37%), Positives = 323/565 (57%), Gaps = 65/565 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEVAIELYYRL-L 65
+A+ LV +Y++ + + A ++FD +P R L LWN ++ YA G E A+EL+ R+
Sbjct: 309 VASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEA 368
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
E G+VP T L AC+ +H V++ + FV AL+D+YA+ +
Sbjct: 369 EAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDME 428
Query: 126 NARQVFDKILERD----------------------------------------------- 138
AR +F I RD
Sbjct: 429 AARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDE 488
Query: 139 ----PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV 194
P+ TL+T++ A +AA +G+E+HG++ RH + ++ V +ALVDMYAKCG + +
Sbjct: 489 EPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLAL 548
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACS 252
+R +F++L ++ V++WN +I Y MHG +A+ LF++M +E +P+ +TF+ L+ACS
Sbjct: 549 SRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACS 608
Query: 253 RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPG-- 310
G+ D G F SM R++ + P+ + C VD+LG +GRLDEA +I M +PG
Sbjct: 609 HSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSM----EPGEQ 664
Query: 311 ---VWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRK 367
W + L +C+LH +V L E+A E+L +LEP +A +YV+L NIY+ A WE +++R
Sbjct: 665 QVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRN 724
Query: 368 LMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTES 427
M RG+ K CSWIE+ H F++G+++HP ++A + L RM+ GY P T S
Sbjct: 725 RMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMDALWERMRNQGYTPDTSS 784
Query: 428 VFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITE 487
V HD+E EKA ++ HSE+LAIAFGL+ TP G + + KNL++C+DCH A KFIS++
Sbjct: 785 VLHDIEESEKAAILRYHSEKLAIAFGLLRTPPGATIRVAKNLRVCNDCHEAAKFISRMVG 844
Query: 488 REITVRDVNRYHHFKDGICSCGDYW 512
REI +RDV R+HHF DG CSCGDYW
Sbjct: 845 REIVLRDVRRFHHFVDGACSCGDYW 869
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 158/370 (42%), Gaps = 52/370 (14%)
Query: 4 GFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
GF P +A L+ Y+ C L A LF+ +P R+ +N LI A + A++
Sbjct: 93 GFTPAVANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRD 152
Query: 64 LLEIGLVPDNFTFPFALKACSALSA-IEEGRRIHEDVIRNKW--ETDVFVGAALIDMYAK 120
+L G +FT L ACS L+ + GR H ++N + + F AL+ MYA+
Sbjct: 153 MLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYAR 212
Query: 121 CSCVVNARQVFDKILERD--------------------------------------PSEA 142
V +A+ +F + D P
Sbjct: 213 LGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGI 272
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHR-FELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
T + + A + + L GRE+H + + N V +ALVDMYA V VAR +F+
Sbjct: 273 TFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDM 332
Query: 202 LR--EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLF 257
+ +++ WNAM+ GYA G +AL+LF +M+ E V P T GVL AC+R F
Sbjct: 333 VPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETF 392
Query: 258 DEGRMFFESMV--RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
G+ V R +P VQ+ ++DL G + EA I D W L
Sbjct: 393 -AGKEAVHGYVLKRGMADNPFVQN--ALMDLYARLGDM-EAARWIFAAIEPRDVVSWNTL 448
Query: 316 LNSCKLHGHV 325
+ C + GH+
Sbjct: 449 ITGCVVQGHI 458
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 54/274 (19%)
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYAKCSCVVNARQ 129
D+F P A K+ +AL ++ R IH +R V AL+ YA+C + A
Sbjct: 58 DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALA 117
Query: 130 VFDKILERDP---------------------------------SEATLVTVISASADIAA 156
+F+ + RD S TLV+V+ A + +A
Sbjct: 118 LFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAE 177
Query: 157 -LPQGRELHGFSWRH-------RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR-- 206
L GRE H F+ ++ RF N AL+ MYA+ GLV A+ LF +
Sbjct: 178 DLRLGREAHAFALKNGFLDGDERFAFN-----ALLSMYARLGLVDDAQMLFGSVDTTDSP 232
Query: 207 ---VVSWNAMITGYAMHGHSTKALD-LFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRM 262
VV+WN M++ G +A++ +++ + V+PD ITF L ACS+ + GR
Sbjct: 233 GGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGRE 292
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+++D + + + +VD+ R+ A
Sbjct: 293 MHAYVLKDSDLAANSFVASALVDMYASHERVGVA 326
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/545 (41%), Positives = 322/545 (59%), Gaps = 40/545 (7%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+ T ++ +Y C L +A F+ + +N WN ++ Y +G A+EL+ + E
Sbjct: 67 VVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCER 126
Query: 68 GLV--PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWE--TDVFVGAALIDMYAKCSC 123
PD F+F A++ACS L +E+GR IHE + R E DV VG AL++MY+KC
Sbjct: 127 SRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGD 186
Query: 124 VVNARQVFDKI-----------------------------------LERDPSEATLVTVI 148
+ AR+VFD I + P + T VTVI
Sbjct: 187 LEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVI 246
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A+++AL QGR +H F+ N+ V ALV MY KCG + A ++F ++ K +
Sbjct: 247 DVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEI 306
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWN +I+ YA HGHS +AL L+++M + V+P +TFVG+LSACS GGL +G +F M
Sbjct: 307 SWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRM 366
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
D+ I PSV H+ C++DLLG GRL EA ++ M ++ + W +LL +CK HG +K
Sbjct: 367 QDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKR 426
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
A +++++ P +G YV+LSNIYA A W+ V K+RK+M RG+KKS SWIE+ +
Sbjct: 427 GVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGD 486
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
H F+SGD SHP +EIY +L + MK GYVP T SVFHD+E +EK +++ CHSE+
Sbjct: 487 VVHEFVSGDRSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDLLVCHSEK 546
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAI +G + P + L I KNL++C DCH A KF+S+IT R+I VRD R+H F++G CS
Sbjct: 547 LAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRDAARFHLFENGSCS 606
Query: 508 CGDYW 512
C DYW
Sbjct: 607 CRDYW 611
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 177/376 (47%), Gaps = 46/376 (12%)
Query: 47 AYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSA--IEEGRRIHEDVIRNKW 104
A++ NG + A+ + R+ + G PD TF L A + + A I++GR IH +
Sbjct: 3 AFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGL 62
Query: 105 ETDVFVGAALIDMYAKCSCVVNARQVFD-----------------KILERD--------- 138
+V VG A+I MY KC + +AR F+ K+ RD
Sbjct: 63 LPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFRE 122
Query: 139 ---------PSEATLVTVISASADIAALPQGRELHGFSWRHRFEL--NVKVKTALVDMYA 187
P + + I A +++ L QGRE+H R EL +V V TAL++MY+
Sbjct: 123 MCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYS 182
Query: 188 KCGLVKVARNLFEQLR-EKRVVSWNAMITGYAMHGHSTKALDLFEKMKD--EVQPDHITF 244
KCG ++ AR +F+ +R + V WNAMI YA HG +ALDL+ M D ++ P TF
Sbjct: 183 KCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTF 242
Query: 245 VGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
V V+ C+ +GR + VR + D ++ +V + G G LDEA D+ M+
Sbjct: 243 VTVIDVCAELSALKQGRA-IHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMK 301
Query: 305 VKPDPGVWGALLNSCKLHGHVKLAELALEK--LIELEPHDAGNYVILSNIYARAANWEGV 362
+K D W +++S HGH A L ++ L ++P + +LS +G+
Sbjct: 302 LK-DEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGL 360
Query: 363 AKLRKLMIDRGIKKSI 378
++ D IK S+
Sbjct: 361 DYFYRMQDDHRIKPSV 376
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F + +++ LVH+Y C CL A +F + ++ WN +I +YA++G + A+ LY
Sbjct: 270 FDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQ 329
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ G+ P TF L ACS + +G
Sbjct: 330 EMDLQGVKPTEVTFVGLLSACSHGGLVADG 359
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/511 (43%), Positives = 304/511 (59%), Gaps = 46/511 (9%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ +Y C + +A +LFD++ R++ WN LI Y G EIG
Sbjct: 218 VGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEG-------------EIG 264
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D F R H +++ W A+I Y + A
Sbjct: 265 VAEDLFE-----------------RMEHRNIV--SW-------TAMISGYTQNGFAEQAL 298
Query: 129 QVFDKIL----ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVD 184
+FD++L E P+ T+V+V+ A A AAL +GR +H F+ LN V+TAL
Sbjct: 299 GLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAG 358
Query: 185 MYAKCGLVKVARNLFEQLRE--KRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDH 241
MYAKC + AR F+ + + K +++WN MIT YA HG +A+ +FE M + VQPD
Sbjct: 359 MYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDA 418
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
+TF+G+LS CS GL D G F M + ++P V+HY C+VDLLG +GRL EA +LI
Sbjct: 419 VTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELIS 478
Query: 302 QMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEG 361
QM ++ P VWGALL +C+ H ++++AELA +L LEP ++GNYV+LSN+YA A WE
Sbjct: 479 QMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEE 538
Query: 362 VAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGY 421
V KLR L+ +G+KKS CSWIE+ K+H F+ D SHP EIY L+ L ++K AGY
Sbjct: 539 VKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGY 598
Query: 422 VPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKF 481
+P T V HD+ +EK + HSE+LAIAFGL+NT G L +TKNL+IC DCH A KF
Sbjct: 599 IPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKF 658
Query: 482 ISKITEREITVRDVNRYHHFKDGICSCGDYW 512
ISKI EREI VRD+NR+H FKDG CSCGDYW
Sbjct: 659 ISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 689
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 168/331 (50%), Gaps = 51/331 (15%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVA---I 58
G P LA K+V +Y++ L +A +FDRI + L+N +IRAY +G +
Sbjct: 107 GLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXL 166
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
E Y R+ +GL+ DNFT PF LK+C+ LS + GR +H +R E D +VGA+LIDMY
Sbjct: 167 EAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMY 226
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
KC + +AR++FDK++ RD + SW
Sbjct: 227 VKCGVIGDARKLFDKMIVRDMA--------------------------SW---------- 250
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM---KD 235
AL+ Y K G + VA +LFE++ + +VSW AMI+GY +G + +AL LF++M
Sbjct: 251 -NALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGS 309
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMF--FESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
E++P+ +T V VL AC++ + GR F + + H++ SVQ T + + L
Sbjct: 310 EMKPNWVTIVSVLPACAQSAALERGRRIHDFANGI-GLHLNSSVQ--TALAGMYAKCYSL 366
Query: 294 DEA-CDLIMQMRVKPDPGVWGALLNSCKLHG 323
EA C M + + W ++ + HG
Sbjct: 367 VEARCCFDMIAQNGKNLIAWNTMITAYASHG 397
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 6/145 (4%)
Query: 2 GFGFH--PVLATKLVHLYSACDCLHNAHQLFDRIPQ--RNLFLWNVLIRAYAWNGPYEVA 57
G G H + T L +Y+ C L A FD I Q +NL WN +I AYA +G A
Sbjct: 343 GIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEA 402
Query: 58 IELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDV-IRNKWETDVFVGAALID 116
+ ++ +L G+ PD TF L CS I+ G D+ + E V A ++D
Sbjct: 403 VSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVD 462
Query: 117 MYAKCSCVVNARQVFDKI-LERDPS 140
+ + +V A+++ ++ ++ PS
Sbjct: 463 LLGRAGRLVEAKELISQMPMQAGPS 487
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 92/225 (40%), Gaps = 16/225 (7%)
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
K S + R + IL+ P ++ + + G++ H H + N +
Sbjct: 56 KPSLNLQLRILLQPILQHFPHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLA 115
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHG---HSTKALDLFEKMKD- 235
+V MYA G + A +F+++ + +N++I Y HG L+ + +M
Sbjct: 116 AKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFL 175
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-----DYHIDPSVQHYTCMVDLLGHS 290
+ D+ T VL +C+ GR +R D+++ S ++D+
Sbjct: 176 GLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGAS------LIDMYVKC 229
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
G + +A L +M V+ D W AL+ G + +AE E++
Sbjct: 230 GVIGDARKLFDKMIVR-DMASWNALIAGYMKEGEIGVAEDLFERM 273
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/563 (38%), Positives = 320/563 (56%), Gaps = 63/563 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQ--RNLFLWNVLIRAYAWNGPYEVAIELYYRL-L 65
+A+ LV +Y+ + + +A ++FD +P+ R L +WN +I YA G E A+EL+ R+
Sbjct: 320 VASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEA 379
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
E G P T L AC+ +H V++ + FV AL+DMYA+ +
Sbjct: 380 EAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMD 439
Query: 126 NARQVFDKILERD----------------------------------------------- 138
AR++F I RD
Sbjct: 440 VARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHR 499
Query: 139 --PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
P+ TL+T++ A +AA +G+E+HG++ RH E ++ V +ALVDMYAKCG + +R
Sbjct: 500 CMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASR 559
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK--DEVQPDHITFVGVLSACSRG 254
+F++L + V++WN +I Y MHG +A+ LF++M E P+ +TF+ L+ACS
Sbjct: 560 AVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHS 619
Query: 255 GLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPG---- 310
GL D G F M RD+ + P+ + C+VD+LG +GRLDEA +I M +PG
Sbjct: 620 GLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSM----EPGEQQV 675
Query: 311 -VWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLM 369
W +LL +C+LH +V+L E+A E+L ELEP +A +YV+L NIY+ A W+ +R M
Sbjct: 676 SAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRM 735
Query: 370 IDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVF 429
+G+ K CSWIE+ H F++G++SHP E++A + L RM+ GY P T V
Sbjct: 736 RRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHAHMDALWERMRREGYAPDTSCVL 795
Query: 430 HDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITERE 489
HDV+ DEKA M+ HSE+LAIAFGL+ P G + + KNL++C+DCH A KF+SK+ R+
Sbjct: 796 HDVDEDEKAAMLRYHSEKLAIAFGLLRAPPGAAIRVAKNLRVCNDCHEAAKFMSKMVGRD 855
Query: 490 ITVRDVNRYHHFKDGICSCGDYW 512
I +RDV R+HHF+DG CSCGDYW
Sbjct: 856 IVLRDVRRFHHFRDGSCSCGDYW 878
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 156/371 (42%), Gaps = 62/371 (16%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQR------NLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
L+ +Y+ + +A LF ++ WN +I G A+E+ Y ++
Sbjct: 216 LLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVS 275
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK-WETDVFVGAALIDMYAKCSCVV 125
+G+ PD TF AL ACS L + GR +H V+++ + FV +AL+DMYA V
Sbjct: 276 LGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVA 335
Query: 126 NARQVFDKILERD------------------------------------PSEATLVTVIS 149
+AR+VFD + E PSE T+ V+
Sbjct: 336 SARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLP 395
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A A +HG+ + N V+ AL+DMYA+ G + VAR +F + + VVS
Sbjct: 396 ACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVS 455
Query: 210 WNAMITGYAMHGHSTKALDLFEKMK-----------------DEVQPDHITFVGVLSACS 252
WN +ITG + GH+ +A L +M+ P++IT + +L C+
Sbjct: 456 WNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCA 515
Query: 253 RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
G+ VR + ++ + + +VD+ G L A + + + W
Sbjct: 516 ALAAPARGKEIHGYAVR-HALESDIAVGSALVDMYAKCGCL-AASRAVFDRLPRRNVITW 573
Query: 313 GALLNSCKLHG 323
L+ + +HG
Sbjct: 574 NVLIMAYGMHG 584
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 140/346 (40%), Gaps = 57/346 (16%)
Query: 36 RNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP-DNFTFPFALKACSALSAIEEGRR 94
R+ +N LI A +E A++ +L G +FT L ACS L ++GRR
Sbjct: 131 RDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPG-DDGRR 189
Query: 95 I----HEDVIRNKW---ETDVFVGAALIDMYAKCSCVVNARQVFDKI------------- 134
+ H ++ + + F AL+ MYA+ V +A+ +F
Sbjct: 190 LGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVT 249
Query: 135 --------------------------LERDPSEATLVTVISASADIAALPQGRELHGFSW 168
L P T + + A + + L GRE+H
Sbjct: 250 WNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVL 309
Query: 169 RHR-FELNVKVKTALVDMYAKCGLVKVARNLFEQLRE--KRVVSWNAMITGYAMHGHSTK 225
+ N V +ALVDMYA V AR +F+ + E +++ WNAMI GYA G +
Sbjct: 310 KDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEE 369
Query: 226 ALDLFEKMKDEV--QPDHITFVGVLSACSRG-GLFDEGRMFFESMVRDYHIDPSVQHYTC 282
AL+LF +M+ E P T GVL AC+R G + M + R + VQ+
Sbjct: 370 ALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQN--A 427
Query: 283 MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
++D+ G +D A I M D W L+ C + GH A
Sbjct: 428 LMDMYARLGEMDVA-RRIFAMIDPRDVVSWNTLITGCVVQGHAAEA 472
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 154/368 (41%), Gaps = 76/368 (20%)
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYAKC-------- 121
D+F P A+K+ +AL R +H +R VG AL+ YA+C
Sbjct: 62 DHFALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALA 121
Query: 122 ---------------SCVVNARQVF-----------DKILE--RDPSEATLVTVISASAD 153
+ +++A +F D + E D S TLV+V+ A +
Sbjct: 122 LFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSH 181
Query: 154 IAA---LPQGRELHGFSW--------RHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
+ GRE H F+ R RF N AL+ MYA+ GLV A++LF
Sbjct: 182 LPGDDGRRLGREAHAFALKRGFLDEGRERFPFN-----ALLSMYARLGLVDDAQSLFRTT 236
Query: 203 REK------RVVSWNAMITGYAMHGHSTKALD-LFEKMKDEVQPDHITFVGVLSACSRGG 255
VV+WN MI+ G +A++ L++ + V+PD +TF L ACSR
Sbjct: 237 AAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLE 296
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP----GV 311
+ GR +++D + + + +VD+ + ++ A + + P+P G+
Sbjct: 297 MLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMV---PEPSRQLGM 353
Query: 312 WGALLNSCKLHGHVKLAELALEKL--IELEPHDAGNYVILSNIY---ARAANWEGVAKLR 366
W A++ + + E ALE +E E A + +S + AR+ + G +
Sbjct: 354 WNAMICG---YAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMH 410
Query: 367 KLMIDRGI 374
++ RG+
Sbjct: 411 GYVVKRGM 418
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/545 (39%), Positives = 321/545 (58%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P++ L++ YS + Q+F+ +++ W+ +I ++A N +AI+ +
Sbjct: 84 GLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQNEEPVLAIQYF 143
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R++ L PD+ FP A KAC+ L + G+ +H VI+ ++ DVFVG++L+DMYAKC
Sbjct: 144 CRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKC 203
Query: 122 SCVVNARQVFDKILER---------------------------------DPSEATLVTVI 148
+ AR VFD++ R D ++ TL +VI
Sbjct: 204 GDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVI 263
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
L G+++HG ++ ++L+ V ++L+ +Y+KCGL++ A +F+++ K +
Sbjct: 264 RVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLG 323
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
WNAM+ A H H+ +A DLF KM++ ++P+ ITF+ VL ACS GL +EG+ +F ++
Sbjct: 324 MWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGLVEEGKKYF-AL 382
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
++ Y I+P QHY MVDLLG +G+L EA +I M +P VWGA + C++HG+ L
Sbjct: 383 MKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGAFITGCRIHGNTDL 442
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
A A +K+ EL +G +V+LSN YA A +E AK RK++ DRG+KK SWIE N
Sbjct: 443 AAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKMLRDRGVKKETGLSWIEEGN 502
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ H F +GD H EIY KL+ L M+ AGYV T V +V ++EK I HSER
Sbjct: 503 RVHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGYVADTSFVLREVGSEEKNQTIRYHSER 562
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGLI+ P G + I KNL++C DCH AIKFISK++ R I VRD NR+H F+DG CS
Sbjct: 563 LAIAFGLISIPLGRPIRIMKNLRVCGDCHNAIKFISKLSGRVIIVRDNNRFHRFEDGKCS 622
Query: 508 CGDYW 512
C DYW
Sbjct: 623 CADYW 627
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 85/184 (46%), Gaps = 4/184 (2%)
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+L +G+++H + ++ V L++ Y+K L ++ +FE+ K +W+++I+
Sbjct: 69 SLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVIS 128
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD-YHI 273
+A + A+ F +M E + PD F AC+ G D G+ +++ Y +
Sbjct: 129 SFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDV 188
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
D V + +VD+ G + EA ++ +M + G + +L H + L E
Sbjct: 189 DVFVG--SSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKE 246
Query: 334 KLIE 337
L+E
Sbjct: 247 ALLE 250
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/545 (38%), Positives = 317/545 (58%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+G + + +++LY+ C + +A ++FDR+ +R+ W+ ++ + G AIE+Y
Sbjct: 133 GYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMY 192
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+ GL D ++AC+A G +H ++R+ + DV + +L+DMYAK
Sbjct: 193 MRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKN 252
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
AR+VF+ + R+ P+ +V +
Sbjct: 253 GLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGAL 312
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A +D+ L G+ +HGF R EL+ V TA++DMY+KCG + A+ LF+++ + ++
Sbjct: 313 LACSDLGLLKLGKSIHGFILR-TLELDRMVGTAVIDMYSKCGSLSSAQMLFDKVVSRDLI 371
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWN MI HG AL LF++MK +EV+PDH TF +LSA S GL +EG+ +F M
Sbjct: 372 SWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEEGKFWFNCM 431
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
V +Y I+P +H C+VDLL SG ++EA L+ + KP + ALL+ C + ++L
Sbjct: 432 VNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTISILVALLSGCLNNNKLEL 491
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E EK++EL+P D G ++SN+YA A NW V ++RKLM D G KK+ CS IE++
Sbjct: 492 GESTAEKILELQPGDVGVLALVSNLYAAAKNWYKVREVRKLMKDHGSKKAPGCSSIEIRG 551
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
H F+ D SHP +I + L+ M++ GY+P TE V+HD+E K ++ HSER
Sbjct: 552 ALHTFVMEDQSHPQHRQILQMVMKLDSEMRKMGYIPKTEFVYHDLEEGVKEQLLSRHSER 611
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA AFGL+NT GTRL++ KNL++C DCH AIK++SKI +REI VRD R+HHFKDG CS
Sbjct: 612 LATAFGLLNTSPGTRLVVIKNLRVCGDCHDAIKYMSKIADREIVVRDAKRFHHFKDGACS 671
Query: 508 CGDYW 512
CGDYW
Sbjct: 672 CGDYW 676
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 162/354 (45%), Gaps = 40/354 (11%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQR--NLFLWNVLIRAYAWNGPYEVAIELYYR 63
H +L++ L Y+ L A P ++ WN L+ A++ A+ ++ R
Sbjct: 35 HHILSSCLATAYARAGDLAAAESTLATAPTSPSSIPAWNALLAAHSRGASPHEALRVF-R 93
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
L PD+ TF AL AC+ L + G + + + D+FV ++++++YAKC
Sbjct: 94 ALPPAARPDSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGA 153
Query: 124 VVNARQVFDKILERD---------------------------------PSEATLVTVISA 150
+ +A +VFD++ +RD E +V V+ A
Sbjct: 154 MDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQA 213
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
A G +HG+ RH +++V + T+LVDMYAK GL AR +FE + + VSW
Sbjct: 214 CAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSW 273
Query: 211 NAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
+A+I+ A +G++ +AL LF M+ + P+ VG L ACS GL G+ ++R
Sbjct: 274 SALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILR 333
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+D V T ++D+ G L A ++ V D W ++ C HG
Sbjct: 334 TLELDRMVG--TAVIDMYSKCGSLSSA-QMLFDKVVSRDLISWNVMIACCGAHG 384
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/536 (40%), Positives = 309/536 (57%), Gaps = 36/536 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
LV++YS D ++A L P R++ W LI NG + A+ + + + P+
Sbjct: 48 LVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPN 107
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+FTFP A KA +L + G+++H ++ +DVFVG + DMY+K AR++FD
Sbjct: 108 DFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFD 167
Query: 133 KILER---------------------------------DPSEATLVTVISASADIAALPQ 159
++ ER +P++ + +V+SA A ++ L
Sbjct: 168 EMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEV 227
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G+ +H + + N+ V +ALVDMY KCG ++ A F+++ E+ +V+WNAMI GYA
Sbjct: 228 GKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAH 287
Query: 220 HGHSTKALDLFEKM---KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
G + A+ LF++M V P+++TFV VLSACSR G + G FESM Y I+P
Sbjct: 288 QGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPG 347
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
+HY C+VDLLG +G +++A I +M ++P VWGALL + K+ G +L ++A + L
Sbjct: 348 AEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLF 407
Query: 337 ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGD 396
EL+P D+GN+V+LSN++A A WE +RK M D GIKK CSWI N H F + D
Sbjct: 408 ELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKD 467
Query: 397 ASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLIN 456
SH EI A L L G M+ AGY+P T D+E +EKA + HSE++A+AFGLI+
Sbjct: 468 TSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLIS 527
Query: 457 TPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
P G + ITKNL+IC DCH AIKFIS I REI VRD N +H F+D CSC DYW
Sbjct: 528 IPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 583
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL--E 66
+ + LV +Y C + +A + FD +P+RNL WN +I YA G ++A+ L+ +
Sbjct: 246 VGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGS 305
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYAKCSCV 124
+ P+ TF L ACS ++ G I E +R ++ E A ++D+ + V
Sbjct: 306 HRVAPNYVTFVCVLSACSRAGSVNVGMEIFES-MRGRYGIEPGAEHYACVVDLLGRAGMV 364
Query: 125 VNARQVFDKILERDPSEATLVTVISAS 151
A Q K+ R P+ + ++ AS
Sbjct: 365 EQAYQFIKKMPIR-PTVSVWGALLGAS 390
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/540 (38%), Positives = 320/540 (59%), Gaps = 34/540 (6%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P + L+ +Y+ C + +A F+ IP ++ L + +I YA + E A EL+ RL+
Sbjct: 298 PHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMR 357
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
++P+ ++ L+AC+ + ++ G++IH I+ E+D+FVG AL+D YAKC+ + +
Sbjct: 358 SSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDS 417
Query: 127 ARQVFDKILERDP---------------------------------SEATLVTVISASAD 153
+ ++F + + + ++ T +V+ A A
Sbjct: 418 SLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACAS 477
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
A++ ++H + F + + +L+D YAKCG ++ A +F+ L E+ ++SWNA+
Sbjct: 478 TASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAI 537
Query: 214 ITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I+GYA+HG + AL+LF++M K V+ + ITFV +LS CS GL + G F+SM D+
Sbjct: 538 ISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHG 597
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I PS++HYTC+V LLG +GRL++A I + P VW ALL+SC +H +V L +
Sbjct: 598 IKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSA 657
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
EK++E+EP D YV+LSN+YA A + + VA LRK M + G++K SW+E+K + HAF
Sbjct: 658 EKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAF 717
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
G HP+ I A L+WL + GY+P V HDV+ ++K M+ HSERLA+A+
Sbjct: 718 SVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAY 777
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
GL+ TP G + I KNL+ C DCH A ISKI +REI VRD+NR+HHF+DG CSCGDYW
Sbjct: 778 GLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 837
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 188/415 (45%), Gaps = 40/415 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + + L+ YS C + +A +F+ I +++ +W ++ Y+ N E A +
Sbjct: 191 LGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRV 250
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ G P+ F LKA L ++ G+ IH I+ +T+ VG AL+DMYAK
Sbjct: 251 FSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAK 310
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + +AR F+ I D P+E +L +V
Sbjct: 311 CGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSV 370
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A ++ L G+++H + + E ++ V AL+D YAKC + + +F LR+
Sbjct: 371 LQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANE 430
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSAC-SRGGLFDEGRMFFE 265
VSWN ++ G++ G +AL +F +M+ P +T+ VL AC S + G++
Sbjct: 431 VSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCS 490
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
++ D + + ++D G + +A + Q ++ D W A+++ LHG
Sbjct: 491 IEKSTFNNDTVIGN--SLIDTYAKCGYIRDALK-VFQHLMERDIISWNAIISGYALHGQA 547
Query: 326 KLAELALEKL--IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
A +++ +E +D +LS + G++ + ID GIK S+
Sbjct: 548 ADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSM 602
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 138/297 (46%), Gaps = 34/297 (11%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
A L+++Y L +A +LFDR+P+RN+ + L++A+A G +E A L+ RL G
Sbjct: 99 ANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGH 158
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
+ F LK A+ A +H + + + FVG+ LID Y+ CS V +A
Sbjct: 159 EVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEH 218
Query: 130 VFDKILERD---------------------------------PSEATLVTVISASADIAA 156
VF+ I+ +D P+ L +V+ A+ + +
Sbjct: 219 VFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPS 278
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
+ G+ +HG + + + V AL+DMYAKCG +K AR FE + V+ + MI+
Sbjct: 279 VVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISR 338
Query: 217 YAMHGHSTKALDLFEK-MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
YA + +A +LF + M+ V P+ + VL AC+ D G+ ++ H
Sbjct: 339 YAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGH 395
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 139/351 (39%), Gaps = 89/351 (25%)
Query: 54 YEVAIE-LYYRLLEIGLVP-----DNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--E 105
Y A++ L L + ++P D+F L+ C A GR +H V+R
Sbjct: 34 YAAALQWLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGR 93
Query: 106 TDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASA------------- 152
D+F L++MY K + +AR++FD++ ER+ + VT++ A A
Sbjct: 94 LDLFCANVLLNMYGKLGPLASARRLFDRMPERN--MVSFVTLVQAHAQRGDFEAAAALFR 151
Query: 153 ------------------------DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
D A L G +H +W+ + N V + L+D Y+
Sbjct: 152 RLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGG--VHSCAWKLGHDHNAFVGSGLIDAYSL 209
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGV 247
C LV A ++F + K V W AM++ Y+ + A +F KM+ +P+ V
Sbjct: 210 CSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSV 269
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
L A + S+V I + C + L +
Sbjct: 270 LKAA----------VCLPSVVLGKGI------HGCAIKTLNDT----------------- 296
Query: 308 DPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN 358
+P V GALL+ G +K A LA E + P+D + ++LS + +R A
Sbjct: 297 EPHVGGALLDMYAKCGDIKDARLAFEMI----PYD--DVILLSFMISRYAQ 341
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/547 (38%), Positives = 332/547 (60%), Gaps = 35/547 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + L+++YS C + +A + F+ +P ++L WN +I A N A++L
Sbjct: 72 IGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQNAEDREALKL 131
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
++ G + FT L C+ AI E ++H I+ +++ FVG AL+ +YAK
Sbjct: 132 LIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAK 191
Query: 121 CSCVVNARQVFDKILERDP----------------SEATLV-----------------TV 147
CS + +A Q+F+ + E++ EA L+ +
Sbjct: 192 CSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSA 251
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR- 206
+SA A +A L +G+++H S + F N+ V ++L+DMYAKCG ++ A +F+ + E R
Sbjct: 252 VSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRS 311
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+V WNAMI+G+A H + +A+ LFEKM+ PD +T+V VL+ACS GL +EG+ +F+
Sbjct: 312 IVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFD 371
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
MVR +++ PSV HY+CM+D+LG +G + +A DLI +M +WG+LL SCK++G++
Sbjct: 372 LMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYGNI 431
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+ AE+A + L E+EP++AGN+++L+NIYA W+ VA+ RKL+ + ++K SWIE+
Sbjct: 432 EFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLLRETDVRKERGTSWIEI 491
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
KNK H+F G+ +HP D+IYAKL L +K+ Y T + HDVE + K ++ HS
Sbjct: 492 KNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYKVDTSNDLHDVEENRKQMLLRHHS 551
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
E+LAI FGL+ P + I KNL+IC DCH +K +SK T REI VRD NR+HHFKDG
Sbjct: 552 EKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLVSKSTSREIIVRDTNRFHHFKDGF 611
Query: 506 CSCGDYW 512
CSCG++W
Sbjct: 612 CSCGEFW 618
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 128/292 (43%), Gaps = 35/292 (11%)
Query: 78 FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI--- 134
+ L+ C+ + GR H +IR E D+ LI+MY+KCS V +AR+ F+++
Sbjct: 48 YLLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVK 107
Query: 135 ---------------------------LERDPS---EATLVTVISASADIAALPQGRELH 164
++R+ + E T+ +V+ A A+ + +LH
Sbjct: 108 SLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLH 167
Query: 165 GFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST 224
FS + + N V TAL+ +YAKC +K A +FE + EK V+W++M+ GY +G
Sbjct: 168 AFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHE 227
Query: 225 KALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
+AL +F + D +SAC+ EG+ ++ ++ + +
Sbjct: 228 EALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQ-VHAISHKSGFGSNIYVSSSL 286
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+D+ G + EA + + +W A+++ H A + EK+
Sbjct: 287 IDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKM 338
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/542 (40%), Positives = 325/542 (59%), Gaps = 41/542 (7%)
Query: 4 GFHPV--LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P+ L L+++Y + L++AHQLFD++PQRN+ W +I AY+ ++ A+EL
Sbjct: 43 GHQPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELL 102
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+L G+ P+ +T+ L+AC+ +S + R +H +I+ E+DV+V +ALID++AK
Sbjct: 103 VLMLRDGVRPNVYTYSSVLRACNGMSDV---RMLHCGIIKEGLESDVYVRSALIDVFAKL 159
Query: 122 SCVVNARQVFDKILERDP---------------------------------SEATLVTVI 148
+A VFD+++ D +ATL +V+
Sbjct: 160 GEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVL 219
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A +A L G + H + ++ ++ + ALVDMY KCG ++ AR +F Q++E+ V+
Sbjct: 220 RACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVI 277
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W+ MI+G A +G+S +AL LFE MK +P++IT VGVL ACS GL ++G +F SM
Sbjct: 278 TWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSM 337
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ Y I+P +HY CM+DLLG +G+LD+A L+ +M +PD W LL +C++ ++ L
Sbjct: 338 KKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVL 397
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE A +K+I L+P DAG Y +LSNIYA + W+ V ++RK M D GIKK CSWIEV
Sbjct: 398 AEYAAKKVIALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNK 457
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ HAF+ GD SHP E+ KL L R+ GYVP T V D+E ++ + + HSE+
Sbjct: 458 QIHAFIIGDESHPQIVEVNKKLNQLIHRLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEK 517
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+AFGL+ P + I KNL+IC DCH+ K SK+ R I +RD RYHHF+DG CS
Sbjct: 518 LALAFGLMTLPSEKVIRIRKNLRICGDCHVFCKLASKLENRNIVIRDPIRYHHFQDGKCS 577
Query: 508 CG 509
CG
Sbjct: 578 CG 579
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 139/301 (46%), Gaps = 45/301 (14%)
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
GL D+ T+ +K C + A+ EG I + N + +F+ LI+MY K + + +A
Sbjct: 8 GLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDA 67
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
Q+FD++ +R+ P+ T +V+ A +
Sbjct: 68 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGM 127
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
+ + R LH + E +V V++AL+D++AK G + A ++F+++ + WN++I
Sbjct: 128 SDV---RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSII 184
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
G+A + S AL+LF++MK + T VL AC+ L + G ++ V
Sbjct: 185 GGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG---MQAHVHIVKY 241
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH----VKLAE 329
D + +VD+ G L++A + QM+ + D W +++ +G+ +KL E
Sbjct: 242 DQDLILNNALVDMYCKCGSLEDARRVFNQMKER-DVITWSTMISGLAQNGYSQEALKLFE 300
Query: 330 L 330
L
Sbjct: 301 L 301
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/550 (37%), Positives = 326/550 (59%), Gaps = 38/550 (6%)
Query: 1 MGFGFHPVLATKLVHLYSAC---DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV- 56
+G + LV +Y+ C + ++ ++F+++P+ N+ W +I AY +G +
Sbjct: 278 LGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKE 337
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
AIEL+ +++ + P++F+F LKAC LS G +++ ++ + VG +LI
Sbjct: 338 AIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLIS 397
Query: 117 MYAKCSCVVNARQVFDKILERD---------------------------------PSEAT 143
MYA+ + +AR+ FD + E++ S T
Sbjct: 398 MYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFT 457
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
+++S +A I A+ +G ++HG + ++ N + AL+ MY++CG ++ A +F ++
Sbjct: 458 FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME 517
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRM 262
++ V+SW +MITG+A HG +T+AL++F KM + +P+ IT+V VLSACS G+ EG+
Sbjct: 518 DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK 577
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
F SM +++ I P ++HY CMVDLLG SG L EA + I M + D VW LL +C++H
Sbjct: 578 HFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVH 637
Query: 323 GHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSW 382
G+ +L A E ++E EP D Y++LSN++A A W+ V K+RK M +R + K CSW
Sbjct: 638 GNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSW 697
Query: 383 IEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMIC 442
IEV+N+ H F G+ SHP +IY +L L ++KE GY+P T+ V HD+E ++K +
Sbjct: 698 IEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLF 757
Query: 443 CHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFK 502
HSE++A+AFGLI+T + I KNL++C DCH AIK+IS T REI VRD NR+HH K
Sbjct: 758 QHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIK 817
Query: 503 DGICSCGDYW 512
+G+CSC DYW
Sbjct: 818 NGVCSCNDYW 827
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 161/340 (47%), Gaps = 50/340 (14%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP-QRNLFLWNVLIRAYAWNGPYEVAIEL 60
G V+ L+ LYS C A +F+ + +R+L W+ ++ +A N AI
Sbjct: 74 GLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWT 133
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYA 119
+ +LE+G P+ + F ++ACS + G I+ V++ + E DV VG LIDM+
Sbjct: 134 FLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFV 193
Query: 120 KCSC-VVNARQVFDKILERD---------------------------------PSEATLV 145
K S + +A +VFDK+ ER+ P T
Sbjct: 194 KGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYS 253
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC---GLVKVARNLFEQL 202
+V+SA ++ L G++LH R L+V V +LVDMYAKC G V +R +FEQ+
Sbjct: 254 SVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM 313
Query: 203 REKRVVSWNAMITGYAMHGHSTK-ALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEG 260
E V+SW A+IT Y G K A++LF KM ++P+H +F VL AC G L D
Sbjct: 314 PEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC--GNLSDP- 370
Query: 261 RMFFESMVRDYHIDPSVQHYTC----MVDLLGHSGRLDEA 296
+ V Y + + C ++ + SGR+++A
Sbjct: 371 --YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 408
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 183/393 (46%), Gaps = 44/393 (11%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L +A+++FD++P+RNL W ++I +A G AI+L+ + G VPD FT+ L A
Sbjct: 199 LGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSA 258
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC---VVNARQVFDKILERD- 138
C+ L + G+++H VIR DV VG +L+DMYAKC+ V ++R+VF+++ E +
Sbjct: 259 CTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 318
Query: 139 ---------------------------------PSEATLVTVISASADIAALPQGRELHG 165
P+ + +V+ A +++ G +++
Sbjct: 319 MSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS 378
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
++ + V +L+ MYA+ G ++ AR F+ L EK +VS+NA++ GYA + S +
Sbjct: 379 YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEE 438
Query: 226 ALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCM 283
A LF ++ D + TF +LS + G +G +++ Y + + + +
Sbjct: 439 AFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN--AL 496
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPH 341
+ + G ++ A + +M + + W +++ HG A K++E +P+
Sbjct: 497 ISMYSRCGNIEAAFQVFNEMEDR-NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPN 555
Query: 342 DAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
+ +LS EG + + GI
Sbjct: 556 EITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 588
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 156/381 (40%), Gaps = 79/381 (20%)
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD T+ LK+C + G+ +H ++++ E D V LI +Y+KC AR +
Sbjct: 42 PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLI 101
Query: 131 FDKI-LERD---------------------------------PSEATLVTVISASADIAA 156
F+ + +RD P+E VI A ++
Sbjct: 102 FEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANY 161
Query: 157 LPQGRELHGFSWRHRF-ELNVKVKTALVDMYAK-CGLVKVARNLFEQLREKRVVSWNAMI 214
G ++GF + + E +V V L+DM+ K G + A +F+++ E+ +V+W MI
Sbjct: 162 AWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMI 221
Query: 215 TGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR---- 269
T +A G + A+DLF M+ PD T+ VLSAC+ GL G+ ++R
Sbjct: 222 TRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLA 281
Query: 270 ------------------DYHIDPS-----------VQHYTCMVDLLGHSGRLD-EACDL 299
D +D S V +T ++ SG D EA +L
Sbjct: 282 LDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIEL 341
Query: 300 IMQM---RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL---EPHDAGNYVILSNIY 353
+M ++P+ + ++L +C E ++L + GN +I ++Y
Sbjct: 342 FCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLI--SMY 399
Query: 354 ARAANWEGVAKLRKLMIDRGI 374
AR+ E K ++ ++ +
Sbjct: 400 ARSGRMEDARKAFDILFEKNL 420
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/515 (40%), Positives = 312/515 (60%), Gaps = 6/515 (1%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + LV +Y C L A ++ D +P R++ WN ++ YA NG + A++L
Sbjct: 166 LGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKL 225
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ L PD T L A + S + +D+ E + +I +Y
Sbjct: 226 CREMEDLKLKPDAGTMGSLLPAVTNTSC--DNVLYVKDMFVKLKEKSLISWNVMIAVYVN 283
Query: 121 CSCVVNARQVFDKILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
+ A ++ ++ +P ++ +V+ A D++A GR +H + R + N+ +
Sbjct: 284 NAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLL 343
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-V 237
+ AL+DMYAKCG +K AR +F+Q+ + VVSW +MI+ Y M G A+ LF+KM+D
Sbjct: 344 ENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGF 403
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
PD I FV VL+ACS GL DEGR F M +Y I P ++HY CMVDLLG +G++DEA
Sbjct: 404 TPDWIAFVSVLAACSHAGLVDEGRYCFNLMA-EYGITPGIEHYNCMVDLLGRAGKIDEAY 462
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAA 357
L QM ++P+ VWG+LL++C+++ + +A LA + L +L P +G YV+LSNIYA+A
Sbjct: 463 HLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAG 522
Query: 358 NWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK 417
W+ V +R +M +GIKK S +E+ + + FL+GD SH EIY L L GRMK
Sbjct: 523 RWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRMK 582
Query: 418 EAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHI 477
E GY+P T+S HDVE ++K + HSE+LAI F ++NT G+ + ITKN+++C DCH+
Sbjct: 583 ELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCHV 642
Query: 478 AIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
A K ISKI EREI +RD +R+HHF+DG+CSCGDYW
Sbjct: 643 ATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 167/333 (50%), Gaps = 7/333 (2%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
+P L KL+ Y+AC +FD I +N+ +NV+IR+Y NG Y+ A+ ++ +
Sbjct: 70 NPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMA 129
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G PDN+T+P LKACS + G +IH V++ + ++++G L+ MY KC +
Sbjct: 130 NQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLD 189
Query: 126 NARQVFDKILERD-PSEATLVTVISASADIA-ALPQGRELHGFSWRHRFELNVKVKTALV 183
AR+V D++ RD S ++V + + AL RE+ + + A+
Sbjct: 190 AARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVT 249
Query: 184 DMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHI 242
+ C V +++F +L+EK ++SWN MI Y + +A+DL+ +M+ V+PD +
Sbjct: 250 N--TSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAV 307
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
+ VL AC GR E + R + P++ ++D+ G L EA + Q
Sbjct: 308 SISSVLPACGDLSAAVLGRRIHEYVERK-KLRPNLLLENALIDMYAKCGCLKEARAVFDQ 366
Query: 303 MRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
M + D W +++++ + G K A +K+
Sbjct: 367 MMFR-DVVSWTSMISAYGMSGQGKDAVALFKKM 398
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/550 (37%), Positives = 326/550 (59%), Gaps = 38/550 (6%)
Query: 1 MGFGFHPVLATKLVHLYSAC---DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV- 56
+G + LV +Y+ C + ++ ++F+++P+ N+ W +I AY +G +
Sbjct: 260 LGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKE 319
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
AIEL+ +++ + P++F+F LKAC LS G +++ ++ + VG +LI
Sbjct: 320 AIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLIS 379
Query: 117 MYAKCSCVVNARQVFDKILERD---------------------------------PSEAT 143
MYA+ + +AR+ FD + E++ S T
Sbjct: 380 MYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFT 439
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
+++S +A I A+ +G ++HG + ++ N + AL+ MY++CG ++ A +F ++
Sbjct: 440 FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEME 499
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRM 262
++ V+SW +MITG+A HG +T+AL++F KM + +P+ IT+V VLSACS G+ EG+
Sbjct: 500 DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK 559
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
F SM +++ I P ++HY CMVDLLG SG L EA + I M + D VW LL +C++H
Sbjct: 560 HFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVH 619
Query: 323 GHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSW 382
G+ +L A E ++E EP D Y++LSN++A A W+ V K+RK M +R + K CSW
Sbjct: 620 GNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSW 679
Query: 383 IEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMIC 442
IEV+N+ H F G+ SHP +IY +L L ++KE GY+P T+ V HD+E ++K +
Sbjct: 680 IEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLF 739
Query: 443 CHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFK 502
HSE++A+AFGLI+T + I KNL++C DCH AIK+IS T REI VRD NR+HH K
Sbjct: 740 QHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIK 799
Query: 503 DGICSCGDYW 512
+G+CSC DYW
Sbjct: 800 NGVCSCNDYW 809
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 161/340 (47%), Gaps = 50/340 (14%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP-QRNLFLWNVLIRAYAWNGPYEVAIEL 60
G V+ L+ LYS C A +F+ + +R+L W+ ++ +A N AI
Sbjct: 56 GLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWT 115
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYA 119
+ +LE+G P+ + F ++ACS + G I+ V++ + E DV VG LIDM+
Sbjct: 116 FLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFV 175
Query: 120 KCSC-VVNARQVFDKILERD---------------------------------PSEATLV 145
K S + +A +VFDK+ ER+ P T
Sbjct: 176 KGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYS 235
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC---GLVKVARNLFEQL 202
+V+SA ++ L G++LH R L+V V +LVDMYAKC G V +R +FEQ+
Sbjct: 236 SVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM 295
Query: 203 REKRVVSWNAMITGYAMHGHSTK-ALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEG 260
E V+SW A+IT Y G K A++LF KM ++P+H +F VL AC G L D
Sbjct: 296 PEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC--GNLSDP- 352
Query: 261 RMFFESMVRDYHIDPSVQHYTC----MVDLLGHSGRLDEA 296
+ V Y + + C ++ + SGR+++A
Sbjct: 353 --YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 390
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 183/393 (46%), Gaps = 44/393 (11%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L +A+++FD++P+RNL W ++I +A G AI+L+ + G VPD FT+ L A
Sbjct: 181 LGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSA 240
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC---VVNARQVFDKILERD- 138
C+ L + G+++H VIR DV VG +L+DMYAKC+ V ++R+VF+++ E +
Sbjct: 241 CTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 300
Query: 139 ---------------------------------PSEATLVTVISASADIAALPQGRELHG 165
P+ + +V+ A +++ G +++
Sbjct: 301 MSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS 360
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
++ + V +L+ MYA+ G ++ AR F+ L EK +VS+NA++ GYA + S +
Sbjct: 361 YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEE 420
Query: 226 ALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCM 283
A LF ++ D + TF +LS + G +G +++ Y + + + +
Sbjct: 421 AFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN--AL 478
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPH 341
+ + G ++ A + +M + + W +++ HG A K++E +P+
Sbjct: 479 ISMYSRCGNIEAAFQVFNEMEDR-NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPN 537
Query: 342 DAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
+ +LS EG + + GI
Sbjct: 538 EITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 570
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 156/381 (40%), Gaps = 79/381 (20%)
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD T+ LK+C + G+ +H ++++ E D V LI +Y+KC AR +
Sbjct: 24 PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLI 83
Query: 131 FDKI-LERD---------------------------------PSEATLVTVISASADIAA 156
F+ + +RD P+E VI A ++
Sbjct: 84 FEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANY 143
Query: 157 LPQGRELHGFSWRHRF-ELNVKVKTALVDMYAK-CGLVKVARNLFEQLREKRVVSWNAMI 214
G ++GF + + E +V V L+DM+ K G + A +F+++ E+ +V+W MI
Sbjct: 144 AWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMI 203
Query: 215 TGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR---- 269
T +A G + A+DLF M+ PD T+ VLSAC+ GL G+ ++R
Sbjct: 204 TRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLA 263
Query: 270 ------------------DYHIDPS-----------VQHYTCMVDLLGHSGRLD-EACDL 299
D +D S V +T ++ SG D EA +L
Sbjct: 264 LDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIEL 323
Query: 300 IMQM---RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL---EPHDAGNYVILSNIY 353
+M ++P+ + ++L +C E ++L + GN +I ++Y
Sbjct: 324 FCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLI--SMY 381
Query: 354 ARAANWEGVAKLRKLMIDRGI 374
AR+ E K ++ ++ +
Sbjct: 382 ARSGRMEDARKAFDILFEKNL 402
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/546 (39%), Positives = 318/546 (58%), Gaps = 35/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G H + T L+ LYS C + +A LFD + + +L +N LI Y+ NG ++ L+
Sbjct: 242 GLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLF 301
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
L+ +GL P++ T + S + +H V+++ + + V A+ ++ +
Sbjct: 302 TELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRL 361
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ + +AR+ FD + E+ P+ T+ + +
Sbjct: 362 NDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTL 421
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A + AL G+ LH E NV V TAL+DMYAKCG + AR +F + K VV
Sbjct: 422 SACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVV 481
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNAMI GY +HG +AL L++ M D + P TF+ VL ACS GGL +EG F SM
Sbjct: 482 SWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSM 541
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM-RVKPDPGVWGALLNSCKLHGHVK 326
DY I+P ++H TCMVDLLG +G+L EA +LI + + PGVWGALL +C +H
Sbjct: 542 TDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSD 601
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
LA+LA +KL EL+P ++G YV+LSN++ + A +R+ R + K+ + IE+
Sbjct: 602 LAKLASQKLFELDPENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIG 661
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
NK H F++GD +HP + IY+ L+ L +M EAGY P TE+ +DVE +EK +M+ HSE
Sbjct: 662 NKPHVFMAGDRAHPQSEAIYSYLEKLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSE 721
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LAIAFGL++T GT + I KNL++C DCH A KFISK+T+R I VRD +R+HHF+DG+C
Sbjct: 722 KLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVC 781
Query: 507 SCGDYW 512
SCGDYW
Sbjct: 782 SCGDYW 787
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 163/351 (46%), Gaps = 41/351 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A+ L LY + +A ++FD +P + LWN L+ + + A+E + R++ G
Sbjct: 151 VASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSE----AVESFARMVCDG 206
Query: 69 LV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
V PD T L A + ++ + GR +H + V LI +Y+KC V +A
Sbjct: 207 SVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESA 266
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
R +FD + + D P+ +TLV +I +
Sbjct: 267 RCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPF 326
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
+ LHGF + F N V TA+ ++ + ++ AR F+ + EK + SWNAMI
Sbjct: 327 GHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMI 386
Query: 215 TGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+GYA +G + A+ LFE+M K V+P+ IT LSAC++ G G+ + ++ + +
Sbjct: 387 SGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGK-WLHRIITEEDL 445
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+P+V T ++D+ G + EA + M K + W A++ LHG
Sbjct: 446 EPNVYVMTALIDMYAKCGSISEARRIFNTMDNK-NVVSWNAMIAGYGLHGQ 495
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 193/447 (43%), Gaps = 88/447 (19%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAH--QLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+ P AT L+ Y++ H +LF P+ + FL N L+R+ P
Sbjct: 47 YPLDPAPATSLLLRYASLRA-PTGHLLRLFRGFPRPDRFLRNALLRSLPSLRP------- 98
Query: 61 YYRLLEIGLVPDNFTFPFALKACSAL-------SAIEEGRRIHEDVIRNKWETDVFVGAA 113
RLL PD+F+F FA + +AL ++ R +H + + D FV +A
Sbjct: 99 --RLLFP--CPDSFSFAFAATSLAALCSRGGGAASSSAARALHALAVAAGYAADTFVASA 154
Query: 114 LIDMYAKCSCVVNARQVFDKILERD------------------------------PSEAT 143
L +Y S V +AR+VFD + D P T
Sbjct: 155 LAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSEAVESFARMVCDGSVRPDATT 214
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
L +V+ A+A++A + GR +H F+ + + V T L+ +Y+KCG V+ AR LF+ +
Sbjct: 215 LASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMME 274
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVG-----------VLSAC 251
+ +V++NA+I+GY+++G +++LF E M + P+ T V +L+ C
Sbjct: 275 KPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQC 334
Query: 252 SRGGLFDEGRMF-----------------FESMVRDYHIDP--SVQHYTCMVDLLGHSGR 292
G + G ES + + P +++ + M+ +G
Sbjct: 335 LHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGL 394
Query: 293 LDEACDLIMQM---RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI- 348
+ A L QM V+P+P + L++C G + L + L ++I E + YV+
Sbjct: 395 TEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKW-LHRIITEEDLEPNVYVMT 453
Query: 349 -LSNIYARAANWEGVAKLRKLMIDRGI 374
L ++YA+ + ++ M ++ +
Sbjct: 454 ALIDMYAKCGSISEARRIFNTMDNKNV 480
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/518 (38%), Positives = 319/518 (61%), Gaps = 14/518 (2%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ +YS C L A ++F+++ +RN+ W +I Y +G + AI L ++ + G
Sbjct: 288 FSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEG 347
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D L AC+ +++ G+ +H+ + N +++FV AL+DMYAKC + A
Sbjct: 348 VKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGAN 407
Query: 129 QVFDKILERD------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
VF ++ +D P T+ ++ A A ++AL +G+E+HG+ R+ + +
Sbjct: 408 SVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDR 467
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE 236
V ALVD+Y KCG++ +AR LF+ + K +VSW MI GY MHG+ +A+ F +M+D
Sbjct: 468 HVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDA 527
Query: 237 -VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
++PD ++F+ +L ACS GL ++G FF M D++I+P ++HY CMVDLL +G L +
Sbjct: 528 GIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSK 587
Query: 296 ACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYAR 355
A I + + PD +WGALL C+++ ++LAE E++ ELEP + G YV+L+NIYA
Sbjct: 588 AYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAE 647
Query: 356 AANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG-DASHPNCDEIYAKLKWLEG 414
A E V ++R+ + +G++K+ CSWIE+K + + F+SG ++SHP+ +I + LK +
Sbjct: 648 AEKREEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRR 707
Query: 415 RMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDD 474
+MKE GY P T+ + + +K +C HSE+LA+AFGL+ P + +TKNL++C D
Sbjct: 708 KMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGD 767
Query: 475 CHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
CH KF+SK T REI +RD NR+HHFKDG CSC +W
Sbjct: 768 CHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 151/322 (46%), Gaps = 28/322 (8%)
Query: 4 GFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
G L KLV Y+ C L ++FD + ++N++LWN ++ YA G ++ +I L+
Sbjct: 131 GVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKI 190
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHE--DVIRNKWETDVFVGAALIDMYAKC 121
++E G+ EG+R ++ + DV ++I Y
Sbjct: 191 MVEKGI---------------------EGKRPESASELFDKLCDRDVISWNSMISGYVSN 229
Query: 122 SCVVNARQVFDKI--LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
++ ++ L D AT+++V+ A+ L G+ +H + + FE +
Sbjct: 230 GLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFS 289
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQ 238
L+DMY+KCG + A +FE++ E+ VVSW +MI GY G S A+ L ++M+ E V+
Sbjct: 290 NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVK 349
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
D + +L AC+R G D G+ + ++ ++ ++ ++D+ G ++ A
Sbjct: 350 LDVVAITSILHACARSGSLDNGKDVHD-YIKANNMASNLFVCNALMDMYAKCGSMEGANS 408
Query: 299 LIMQMRVKPDPGVWGALLNSCK 320
+ M VK D W ++ K
Sbjct: 409 VFSTMVVK-DIISWNTMVGELK 429
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 30/300 (10%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
F P+ + + SA HQ+ D +N I + G E A+EL
Sbjct: 42 FSPIFRSCIPVRISATPTRTIDHQVTD---------YNAKILHFCQLGDLENAMELVCMC 92
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
+ L + T+ L+ C+ L ++ +G+++H + N D +G L+ YA C +
Sbjct: 93 QKSEL--ETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDL 150
Query: 125 VNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVD 184
R+VFD + +++ ++S A I F+ ++ + +V+
Sbjct: 151 KEGRRVFDTMEKKNVYLWNF--MVSEYAKIG---------------DFKESICLFKIMVE 193
Query: 185 MYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHIT 243
+ + A LF++L ++ V+SWN+MI+GY +G + + L ++++M + D T
Sbjct: 194 KGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLAT 253
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
+ VL C+ G G+ S+ + + ++D+ G LD A + +M
Sbjct: 254 IISVLVGCANSGTLSLGKA-VHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKM 312
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 111/262 (42%), Gaps = 34/262 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ +A LV LY C L A LFD IP ++L W V+I Y +G AI +
Sbjct: 462 GYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATF 521
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYA 119
+ + G+ PD +F L ACS +E+G R +++N + E + A ++D+ +
Sbjct: 522 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY-IMKNDFNIEPKLEHYACMVDLLS 580
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHR-----FEL 174
+ + A + + TL A+ A L R H + FEL
Sbjct: 581 RTGNLSKAYKFIE----------TLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFEL 630
Query: 175 ---NVKVKTALVDMYAKCGLVKVARNLFEQ-----LREKRVVSW-------NAMITG-YA 218
N L ++YA+ + + + E+ LR+ SW N ++G +
Sbjct: 631 EPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNS 690
Query: 219 MHGHSTKALDLFEKMKDEVQPD 240
H HS K L +KM+ +++ +
Sbjct: 691 SHPHSKKIESLLKKMRRKMKEE 712
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/534 (38%), Positives = 319/534 (59%), Gaps = 34/534 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L++LY+ C A ++FD + R++ WN +I Y N A++L+ R+ G
Sbjct: 97 LINLYTKCGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMT 156
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
FT L AC+A AI E +++H I+ ++ FVG A +D+YAKC+ + +A VF+
Sbjct: 157 EFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFE 216
Query: 133 KILERDP---------------------------------SEATLVTVISASADIAALPQ 159
+ E+ +E T+ +++S A +A + +
Sbjct: 217 NMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIE 276
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G ++H +H F N+ V T+LVD+YAKCG ++ + +F + EK VV WNAMI ++
Sbjct: 277 GTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSR 336
Query: 220 HGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
H HS +A+ LFEKM+ + P+ +T++ +LSACS GL +EGR +F ++ D +P+V
Sbjct: 337 HAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVL 396
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
HY+CMVD+LG SG+ DEA L+ +M +P +WG+LL S ++H +++LA +A E+L L
Sbjct: 397 HYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRL 456
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDAS 398
EP + GN+V+LSN+YA + NWE V RK + D G KK + SWIE K K H F++G+
Sbjct: 457 EPENGGNHVLLSNVYAASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGERE 516
Query: 399 HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTP 458
HP ++Y KL+ + M++ + T+ HDV D+K ++ HSE+LA AFGLI+ P
Sbjct: 517 HPGITDVYNKLEEIYHEMRKISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLISLP 576
Query: 459 DGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ I KNL+IC DCH +K +S ITER++ VRD+NR+HHFKDG CSCGD+W
Sbjct: 577 PNIPITIYKNLRICGDCHSFMKIVSCITERQVIVRDINRFHHFKDGSCSCGDFW 630
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 151/344 (43%), Gaps = 40/344 (11%)
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
D FT L+ C+ ++ G+ H I TD LI++Y KC AR+VF
Sbjct: 55 DVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVF 114
Query: 132 D---------------------------KILER------DPSEATLVTVISASADIAALP 158
D K+ R +E TL + + A A A+
Sbjct: 115 DAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAII 174
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
+ ++LH + + + + V TA +D+YAKC ++K A +FE + EK V+W+++ G+
Sbjct: 175 ECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFV 234
Query: 219 MHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPS 276
+G + L LF+ + E +Q T +LS C+ L EG +V+ +H +
Sbjct: 235 QNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLF 294
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL- 335
V T +VD+ G+++++ ++ M K + +W A++ S H H A + EK+
Sbjct: 295 VA--TSLVDVYAKCGQIEKSYEVFADMEEK-NVVLWNAMIASFSRHAHSWEAMILFEKMQ 351
Query: 336 -IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
+ + P++ ILS EG L+ DR + ++
Sbjct: 352 QVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNV 395
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 124/280 (44%), Gaps = 38/280 (13%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T + +Y+ C+ + +A +F+ +P++ W+ L + NG +E + L+ G
Sbjct: 194 VGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREG 253
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ FT L C++L+ I EG ++H ++++ + ++FV +L+D+YAKC + +
Sbjct: 254 MQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSY 313
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+VF + E++ P+E T ++++SA +
Sbjct: 314 EVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTG 373
Query: 156 ALPQGRELHGFSWRHRF-ELNVKVKTALVDMYAKCGLVKVARNLFEQLR-EKRVVSWNAM 213
+ +GR R E NV + +VD+ + G A L +++ E W ++
Sbjct: 374 LVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSL 433
Query: 214 ITGYAMHGH---STKALDLFEKMKDEVQPDHITFVGVLSA 250
+ +H + + A + +++ E +H+ V +A
Sbjct: 434 LGSSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAA 473
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 4 GFHPVL--ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFH L AT LV +Y+ C + ++++F + ++N+ LWN +I +++ + A+ L+
Sbjct: 288 GFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILF 347
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAK 120
++ ++G+ P+ T+ L ACS +EEGR ++ ++ E +V + ++D+ +
Sbjct: 348 EKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGR 407
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISAS 151
A ++ DK + +P+ + +++ +S
Sbjct: 408 SGKTDEAWKLLDK-MPFEPTASMWGSLLGSS 437
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 4/184 (2%)
Query: 135 LERDPSEA-TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVK 193
+ERD + TL ++ A +L G+ HG + + L+++Y KCG
Sbjct: 49 VERDLIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQND 108
Query: 194 VARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACS 252
AR +F+ + + ++SWN MI GY + +AL LF +M E Q T L AC+
Sbjct: 109 CARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACA 168
Query: 253 RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
E + ++ +D S T +D+ + +AC + M K W
Sbjct: 169 AKYAIIECKQLHTIAIK-LALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSV-TW 226
Query: 313 GALL 316
+L
Sbjct: 227 SSLF 230
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/564 (36%), Positives = 321/564 (56%), Gaps = 60/564 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-EI 67
+ T LV +Y C +FD + +R + +WN L+ YA N + A+ L+ ++ E
Sbjct: 572 VGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISES 631
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
P+ TF L AC + IH +++ + D +V AL+DMY++ V +
Sbjct: 632 EFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEIS 691
Query: 128 RQVFDKILERD------------------------------------------------- 138
+ +F ++ +RD
Sbjct: 692 KTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVP 751
Query: 139 --PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
P+ TL+TV+ A +AAL +G+E+H ++ + + ++V V +ALVDMYAKCG + +A
Sbjct: 752 FKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLAS 811
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-------KDEVQPDHITFVGVLS 249
+F+Q+ + V++WN +I Y MHG +AL+LF M ++ ++P+ +T++ + +
Sbjct: 812 RVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFA 871
Query: 250 ACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
ACS G+ DEG F +M + ++P HY C+VDLLG SGR+ EA +LI M +
Sbjct: 872 ACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNK 931
Query: 310 -GVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKL 368
W +LL +C++H V+ E+A + L LEP+ A +YV++SNIY+ A W+ +RK
Sbjct: 932 VDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKK 991
Query: 369 MIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESV 428
M + G++K CSWIE ++ H FLSGDASHP E++ L+ L RM++ GYVP V
Sbjct: 992 MKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKEGYVPDISCV 1051
Query: 429 FHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITER 488
H+V+++EK M+C HSERLAIAFGL+NTP GT + + KNL++C+DCH+A K ISKI +R
Sbjct: 1052 LHNVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISKIVDR 1111
Query: 489 EITVRDVNRYHHFKDGICSCGDYW 512
EI +RDV R+HHF +G CSCGDYW
Sbjct: 1112 EIILRDVRRFHHFANGTCSCGDYW 1135
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 173/388 (44%), Gaps = 46/388 (11%)
Query: 3 FGFHP----VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAI 58
FG P +A LV++Y C L A Q+FD IP R+ WN +I +E+++
Sbjct: 359 FGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSL 418
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSAL-SAIEEGRRIHEDVIRNKWETDVFVGAALIDM 117
L+ +L + P +FT ACS + + G+++H +RN + + AL+ M
Sbjct: 419 HLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTM 477
Query: 118 YAKCSCVVNARQVFDKILERD---------------------------------PSEATL 144
YA+ V +A+ +F +D P TL
Sbjct: 478 YARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTL 537
Query: 145 VTVISASADIAALPQGRELHGFSWRHRFEL-NVKVKTALVDMYAKCGLVKVARNLFEQLR 203
+V+ A + + L GRE+H ++ R+ + N V TALVDMY C K R +F+ +
Sbjct: 538 ASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVV 597
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ--PDHITFVGVLSACSRGGLFDEGR 261
+ V WNA++ GYA + +AL LF +M E + P+ TF VL AC R +F +
Sbjct: 598 RRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKE 657
Query: 262 MFFESMV-RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
+V R + D VQ+ ++D+ GR++ + + +M K D W ++ C
Sbjct: 658 GIHGYIVKRGFGKDKYVQN--ALMDMYSRMGRVEISKTIFGRMN-KRDIVSWNTMITGCI 714
Query: 321 LHGHVKLAELALEKLIELEPHDAGNYVI 348
+ G A L ++ + D + +
Sbjct: 715 VCGRYDDALNLLHEMQRRQGEDGSDTFV 742
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 148/321 (46%), Gaps = 39/321 (12%)
Query: 33 IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ +R+ W L+R+ + + AI Y +L PDNF FP LKA +A+ + G
Sbjct: 290 VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLG 349
Query: 93 RRIHEDVIR--NKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER------------- 137
++IH V + + + V V +L++MY KC + ARQVFD I +R
Sbjct: 350 KQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLC 409
Query: 138 --------------------DPSEATLVTVISASADI-AALPQGRELHGFSWRHRFELNV 176
DP+ TLV+V A + + + G+++H ++ R+ +L
Sbjct: 410 RFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRT 468
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKAL-DLFEKMKD 235
ALV MYA+ G V A+ LF K +VSWN +I+ + + +AL ++ + D
Sbjct: 469 YTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVD 528
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
V+PD +T VL ACS+ GR +R+ + + T +VD+ + + +
Sbjct: 529 GVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKK 588
Query: 296 ACDLIMQMRVKPDPGVWGALL 316
L+ V+ VW ALL
Sbjct: 589 G-RLVFDGVVRRTVAVWNALL 608
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 146/342 (42%), Gaps = 39/342 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + L+ +YS + + +F R+ +R++ WN +I G Y+ A+ L
Sbjct: 667 GFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLL 726
Query: 62 YRLLE------------------IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK 103
+ + + P++ T L C+AL+A+ +G+ IH ++ K
Sbjct: 727 HEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQK 786
Query: 104 WETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGREL 163
DV VG+AL+DMYAKC C+ A +VFD++ R+ T +I A + EL
Sbjct: 787 LAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRN--VITWNVLIMAYGMHGKGEEALEL 844
Query: 164 H------GFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-----EKRVVSWNA 212
G S R N A+ + G+V +LF ++ E R +
Sbjct: 845 FRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYAC 904
Query: 213 MITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
++ G +A +L M + + +L AC + G + + + +
Sbjct: 905 LVDLLGRSGRVKEAYELINTMPSNLNKVD-AWSSLLGACRIHQSVEFGEIAAKHL---FV 960
Query: 273 IDPSV-QHYTCMVDLLGHSGRLDEACDL---IMQMRVKPDPG 310
++P+V HY M ++ +G D+A + + +M V+ +PG
Sbjct: 961 LEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPG 1002
>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/546 (39%), Positives = 332/546 (60%), Gaps = 34/546 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + L+++YS C + +A +LFD +P R+L WN ++ ++ NG E A+ L
Sbjct: 76 VGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVL 135
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ + G FT + AC+A + E +++H ++ +++VFVG AL+D+YAK
Sbjct: 136 FMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAK 195
Query: 121 CSCVVNARQVFDKILER-DPSEATLVT------------VISASADIAALP--------- 158
C V +A VF+ + ER D + +++V V+ A L
Sbjct: 196 CGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSA 255
Query: 159 -----------QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+G+++ S + N+ V ++L+DMYAKCG+++ A +F + EK V
Sbjct: 256 LSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNV 315
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V WNA+++G++ H S +A+ FEKM+ + P+ IT++ VLSACS GL ++GR +F+
Sbjct: 316 VLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDL 375
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M+R +++ P+V HY+CMVD+LG +G L EA D I +M +WG+LL SC+++ +++
Sbjct: 376 MIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLE 435
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
LAE+A + L E+EPH+AGN+V+LSNIYA WE VA+ R L+ + KK SWIE+K
Sbjct: 436 LAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIK 495
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
+K H+F+ G+ +HP EIY KL+ L G MK+ GY TE HDVE K ++ HSE
Sbjct: 496 HKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQELLRHHSE 555
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LA+ FG++ P G + I KNL+IC DCH +K S ITEREI VRD NR+HHFK+G C
Sbjct: 556 KLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTNRFHHFKNGYC 615
Query: 507 SCGDYW 512
SCG++W
Sbjct: 616 SCGEFW 621
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 3/181 (1%)
Query: 137 RDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
R + L ++ +SA A +G H R + L++MY+KCGLV+ AR
Sbjct: 43 RATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESAR 102
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGG 255
LF+++ + +VSWN M+ + +G KAL LF +M+ E T V+ AC+
Sbjct: 103 KLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKC 162
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
E + ++ +D +V T ++D+ G + +A +L+ + + W ++
Sbjct: 163 CVFECKQLHGFALKTA-LDSNVFVGTALLDVYAKCGLVKDA-NLVFECMPERSDVTWSSM 220
Query: 316 L 316
+
Sbjct: 221 V 221
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/546 (40%), Positives = 320/546 (58%), Gaps = 35/546 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + LV LY+ C + A +F+ + RN+ W +I Y NG A+ +
Sbjct: 198 LGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRI 257
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ + + PD L+A + + +E+G+ IH V++ E + + +L MYAK
Sbjct: 258 FGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAK 317
Query: 121 CSCVVNARQVFDKI-------------------------------LERD--PSEATLVTV 147
C V+ AR FD++ + ++ T+ +
Sbjct: 318 CGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSA 377
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
I A A + +L + + + + + +V V TAL+DM+AKCG V +AR +F++ +K V
Sbjct: 378 ILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDV 437
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V W+AMI GY +HG A+DLF MK V P+ +TFVG+L+AC+ GL +EG F S
Sbjct: 438 VVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHS 497
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M + Y I+ QHY C+VDLLG SG L+EA D I M ++P VWGALL +CK++ HV
Sbjct: 498 M-KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVT 556
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
L E A E+L L+P + G+YV LSN+YA + W+ VAK+R LM ++G+ K + S IE+
Sbjct: 557 LGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEIN 616
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
K AF GD SHP EI+ +L+ LE R+KEAG++P ESV HD+ +EK +C HSE
Sbjct: 617 GKLQAFRVGDKSHPRFKEIFEELESLERRLKEAGFIPHIESVLHDLNQEEKEETLCNHSE 676
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
RLAIA+GLI+T GT L ITKNL+ C +CH A K ISK+ REI VRD NR+HHFK+G+C
Sbjct: 677 RLAIAYGLISTAPGTTLRITKNLRACINCHSATKLISKLVNREIVVRDANRFHHFKNGVC 736
Query: 507 SCGDYW 512
SC DYW
Sbjct: 737 SCRDYW 742
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/350 (32%), Positives = 181/350 (51%), Gaps = 38/350 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L TK V+ + A ++FD P+ ++FLWN +IR Y+ + + AIE+Y R+ G
Sbjct: 105 LVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASG 164
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD FT P LKACS + +E G+R+H + R +E+DVFV L+ +YAKC V AR
Sbjct: 165 VNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQAR 224
Query: 129 QVFDKILERD----------------PSEA-----------------TLVTVISASADIA 155
VF+ + +R+ P EA LV+V+ A D+
Sbjct: 225 IVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVE 284
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L QG+ +HG + E + +L MYAKCG V VAR+ F+Q+ V+ WNAMI+
Sbjct: 285 DLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMIS 344
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHI 273
GYA +G++ +A+ LF++M ++ D IT + AC++ G D + + + + +Y
Sbjct: 345 GYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRN 404
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
D V T ++D+ G +D A + + + D VW A++ LHG
Sbjct: 405 DVFVN--TALIDMFAKCGSVDLARE-VFDRTLDKDVVVWSAMIVGYGLHG 451
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/539 (39%), Positives = 318/539 (58%), Gaps = 36/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV-AIELYYRLLEI 67
+ L+ +YS C L +A +FD +P +++ +WN +I Y+ N Y++ A+ L+ + +
Sbjct: 326 VGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYS-NCGYDIEAMSLFTNMYKE 384
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
GL + T LK+ + A ++H I++ ++ D +V +L+D Y KC + +A
Sbjct: 385 GLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDA 444
Query: 128 RQVFD-------------------------------KILERD--PSEATLVTVISASADI 154
+VF+ ++ +RD P ++ +A A++
Sbjct: 445 AKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANL 504
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
+A QG+++H + +V +LV+MYAKCG + A +F ++ + +VSW+AMI
Sbjct: 505 SAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMI 564
Query: 215 TGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
G A HGH KAL LF +M K+ + P+HIT V VLSAC+ GL E R FF M + + I
Sbjct: 565 GGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGI 624
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P+ +HY CMVD+LG GRLDEA L+ +M + VWGALL + ++H +++L A E
Sbjct: 625 TPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAE 684
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
L+ LEP +G +++L+NIYA W+ VAK+R+ M + +KK SWIE+K+K + F+
Sbjct: 685 MLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFI 744
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD SHP EIY KL L R+ AGYVP E+ HDVE EK ++ HSE+LA+AFG
Sbjct: 745 VGDRSHPRSKEIYVKLDDLRERLTSAGYVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFG 804
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LI TP G + + KNL++C DCH A KFISK+ REI VRD+NR+HHF+DG CSCGDYW
Sbjct: 805 LIATPPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHFRDGSCSCGDYW 863
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 178/364 (48%), Gaps = 40/364 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G+ P A L+ +Y+ C A +F IP+ ++ WN +I + ++A++L
Sbjct: 217 LGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKL 276
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
++ + P FT ALKAC+A+ ++ GR++H +++ E D FVG LIDMY+K
Sbjct: 277 LGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSK 336
Query: 121 CSCVVNARQVFDKILERDP---------------------------------SEATLVTV 147
C + +AR VFD + +D ++ TL T+
Sbjct: 337 CGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTI 396
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ ++A A ++H S + ++ + V +L+D Y KC L++ A +FE + +
Sbjct: 397 LKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDL 456
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V++ +MIT Y+ +G +AL ++ +M+D +++PD F + +AC+ +++G+
Sbjct: 457 VAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVH 516
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGH 324
+++ + V +V++ G +D+A + ++ + G+ W A++ HGH
Sbjct: 517 VLK-CGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWR---GIVSWSAMIGGLAQHGH 572
Query: 325 VKLA 328
+ A
Sbjct: 573 GRKA 576
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 172/413 (41%), Gaps = 107/413 (25%)
Query: 14 VHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDN 73
V+LYS C C A +L + +L W+ LI Y NG E A+ YY + +G +
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 74 FTFPFALKACSALSAIEEGRRIH------------------------------ED----- 98
FTF LK CS +E G++IH ED
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 99 -----VIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD--------------- 138
+I+ +++D F AL+DMYAK C A VF +I + D
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 139 ------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
PS TL + + A A I + GR+LH + E + V
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGV 328
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQP 239
L+DMY+KCGL++ AR +F+ + K V+ WN++I+GY+ G+ +A+ LF M K+ ++
Sbjct: 329 GLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEF 388
Query: 240 DHITFVGVLSACS----------------RGGLFDEGRM------------FFESMVRDY 271
+ T +L + + + G +G + E + +
Sbjct: 389 NQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVF 448
Query: 272 HIDPS--VQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWGALLNSC 319
+ P+ + YT M+ G +EA + ++M+ +KPD ++ +L N+C
Sbjct: 449 EVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNAC 501
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 98/240 (40%), Gaps = 57/240 (23%)
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF------------ 230
V++Y+KC +VAR L E +VSW+A+I+GY +G +AL +
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 231 -----------------------------EKMKDEVQPDHITFVGVLSACSRGGLFDE-- 259
E + + P+ + VL+AC+ GL DE
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACA--GLEDENY 206
Query: 260 GRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
G +++ Y DP + ++D+ SG + A + ++ KPD W A++
Sbjct: 207 GMKVHGYLIKLGYDSDPFSAN--ALLDMYAKSGCPEAAIAVFYEIP-KPDIVSWNAVIAG 263
Query: 319 CKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
C LH LA L K+ G+Y + +++ ++ + A + + + R + ++
Sbjct: 264 CVLHEKNDLALKLLGKM--------GSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSAL 315
>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
Length = 635
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/550 (39%), Positives = 313/550 (56%), Gaps = 40/550 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF L LV +Y C L A +F P+RN+F W +++ A+A NG Y A+ L
Sbjct: 87 GFKSSRYLCNLLVEMYGKCGSLQAAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLL 146
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ P++ TF L A +ALS ++ GR +H + + D+FV LI+MYAKC
Sbjct: 147 EIMDLEGISPNSITFIELLGAVAALSWLDRGRALHRRIACCGFLADIFVANCLINMYAKC 206
Query: 122 SCVVNARQVFDKILER---------------------------------DPSEATLVTVI 148
+ +A VF+ + R +P+E T VTV+
Sbjct: 207 RSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDALKVFLLMTLDGVEPTEVTFVTVV 266
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
ADIA GRE+HG R E NV V AL++MY KC AR +F+ ++ K ++
Sbjct: 267 DVCADIAVFGIGREVHGV-IDARSEANVCVGNALINMYGKCASPDEARKVFDAMQRKDII 325
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE------VQPDHITFVGVLSACSRGGLFDEGRM 262
+WN+MI Y +G+ +AL+++++M++ + D ITF+GVL ACS GL +
Sbjct: 326 TWNSMIAVYGQNGYGFQALEIYKRMQESRMTILGITHDDITFIGVLFACSHAGLVKDSCK 385
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
+ SM+ DY P+ C++DLLG +G LDEA + I M PD +W LL +C H
Sbjct: 386 LYSSMIGDYGFKPTSLQCGCLIDLLGRAGWLDEAEEFINSMPYHPDHTIWTILLGACITH 445
Query: 323 GHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSW 382
V+ A A ++++ L P D+G+YV LSN+YA A W+ +A++RKLM RG+ K S
Sbjct: 446 ADVERAARAADRIMALRPTDSGSYVALSNLYALAERWDDMARMRKLMDQRGVFKMAGKSS 505
Query: 383 IEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMIC 442
IE+ H F++GD SHP EIY +L+ +EG ++E GYVP ++V H+ + K M C
Sbjct: 506 IEIGGVLHEFIAGDTSHPRKREIYEELRRIEGVIRERGYVPDIKAVLHNAAREAKEKMCC 565
Query: 443 CHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFK 502
HSERLAIAFG+I++P GT L I KNL++C DCH A K ISK + R+I VRD NR+H F+
Sbjct: 566 FHSERLAIAFGMISSPGGTELRIMKNLRVCPDCHSATKIISKFSGRKIIVRDANRFHEFR 625
Query: 503 DGICSCGDYW 512
+G CSC DYW
Sbjct: 626 NGSCSCEDYW 635
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 127/280 (45%), Gaps = 37/280 (13%)
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
P + L+ C + +AI EG+RIH ++ +++ ++ L++MY KC + A+ V
Sbjct: 55 PSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKSV 114
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F R+ P+ T + ++ A A ++ L
Sbjct: 115 FHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALSWL 174
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
+GR LH F ++ V L++MYAKC + A ++FE L + V++W A++ Y
Sbjct: 175 DRGRALHRRIACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAY 234
Query: 218 AMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
A++G AL +F M D V+P +TFV V+ C+ +F GR V D + +
Sbjct: 235 ALNGFFRDALKVFLLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREVHG--VIDARSEAN 292
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
V ++++ G DEA + M+ K D W +++
Sbjct: 293 VCVGNALINMYGKCASPDEARKVFDAMQRK-DIITWNSMI 331
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/515 (39%), Positives = 316/515 (61%), Gaps = 6/515 (1%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + L+ +Y C L A Q+ D IP R++ WN ++ YA NG + A+EL
Sbjct: 149 IGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALEL 208
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + L P++ T L A + + + +++ + V +I MY
Sbjct: 209 CREMEALNLKPNDCTMASLLPAVT--NTTSDNVLYVKEMFLKLTKKSVISWNVMIAMYVN 266
Query: 121 CSCVVNARQVFDKILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
S A ++ ++ +P ++V+V+ A D++AL GR +H F+ R + N+ +
Sbjct: 267 NSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLL 326
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-V 237
+ AL+DMYAKCG ++ AR +F Q++ + VVSW ++I+ Y G A+ +F +M++ +
Sbjct: 327 ENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGL 386
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
PD I FV VL+ACS GL D+GR +F M + I P ++H+ C+VDLLG +G++DEA
Sbjct: 387 NPDSIAFVSVLAACSHAGLLDDGRYYFNLMA-ECGITPKLEHFACVVDLLGRAGKIDEAY 445
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAA 357
I QM ++PD VWG LL++C+++ ++ + LA +KL+ L P +G YV+LSNIYA+A
Sbjct: 446 GFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAG 505
Query: 358 NWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK 417
W VA +R +M +GIKK S +E+ + H FL+GD SHP +IY +L L G+MK
Sbjct: 506 RWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVGKMK 565
Query: 418 EAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHI 477
E GY+P T+S HDVE ++K + HSE+LA+AF +INT GT + +TKNL++C DCH+
Sbjct: 566 ELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKNLRVCGDCHV 625
Query: 478 AIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
A K ISKI EREI +RD +R+HHF++G CSCGDYW
Sbjct: 626 AAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 163/317 (51%), Gaps = 7/317 (2%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
++P + KL+ +Y+AC A +FD I +N+ +NV+IR+Y N Y+ A+ +Y +
Sbjct: 52 WNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTM 111
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
G VPD +T+P LKA S ++ G +IH V++ + +++VG LI MY KC +
Sbjct: 112 YTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSL 171
Query: 125 VNARQVFDKILERD-PSEATLVTVISASADIA-ALPQGRELHGFSWRHRFELNVKVKTAL 182
A+QV D+I RD S ++V+V + + AL RE+ + + + A+
Sbjct: 172 KEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAV 231
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDH 241
+ + V + +F +L +K V+SWN MI Y + +A+ L+ +M+ + V+PD
Sbjct: 232 TNTTSDN--VLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDV 289
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
++ V VL A GR + R + P++ ++D+ G L +A +
Sbjct: 290 VSIVSVLPAYGDLSALSLGRRVHKFAERK-KLLPNLLLENALIDMYAKCGCLRDARAVFN 348
Query: 302 QMRVKPDPGVWGALLNS 318
QM+ + D W +++++
Sbjct: 349 QMQFR-DVVSWTSIISA 364
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/545 (38%), Positives = 316/545 (57%), Gaps = 37/545 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
FG + L+ +YS+ L A +F R+ +++ W +I + + A+E Y
Sbjct: 330 FGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYK 389
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+ G++PD T L AC+ + ++ G R+HE I+ + V V +LIDMY+KC
Sbjct: 390 MMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCK 449
Query: 123 CVVNARQVFDKILERD--------------------------------PSEATLVTVISA 150
CV NA +VF I ++ P+ TL++V+SA
Sbjct: 450 CVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESMKPNSVTLISVLSA 509
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
A I AL +G+E+H + R + + A++DMY +CG A N F ++K V +W
Sbjct: 510 CARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAW 568
Query: 211 NAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
N ++TGYA G + A++LF+KM + E+ PD ITF+ +L ACS+ G+ EG +F M
Sbjct: 569 NILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKN 628
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
Y++ P+++HY C+VD+LG +G+LD+A D I M ++PD +WGALLN+C++H +V+L E
Sbjct: 629 KYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGE 688
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
+A +++ E + G Y++L N+YA NW+ V+K+R LM +RG+ CSW+E+K K
Sbjct: 689 IAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKV 748
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLA 449
HAFLSGD SH EI L +MKE G+ S ++E+ +A++ C HSER A
Sbjct: 749 HAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKSSFTSEIESS-RADIFCGHSERQA 807
Query: 450 IAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
IAFGLINT G + + KNL +C CH +KFIS I REI+VRDV YHHFKDG+CSCG
Sbjct: 808 IAFGLINTAPGMPIWVXKNLYMCHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCG 867
Query: 510 D--YW 512
D YW
Sbjct: 868 DEGYW 872
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 151/295 (51%), Gaps = 34/295 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+ ++ L +A +F ++ +R++F WNVL+ YA G ++ A+ LY+R+L
Sbjct: 134 LGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAE 193
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P+ +TFP LK C+ +S I G+ IH VIR +E+DV VG ALI MY KC + NAR
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNAR 253
Query: 129 QVFDKILER---------------------------------DPSEATLVTVISASADIA 155
+FDK+ +R DP T+ TV SA +
Sbjct: 254 MLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLD 313
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
GR +HG+ + F ++ + +L+ MY+ G ++ A +F ++ K VVSW AMI
Sbjct: 314 NERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIA 373
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
H KA++ ++ M+ E + PD IT V VLSAC+ G D G E ++
Sbjct: 374 SLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIK 428
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 171/375 (45%), Gaps = 40/375 (10%)
Query: 3 FGFHPVL--ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
FGF + L+ +Y C + NA LFD++P+R+ WN +I Y NG +EL
Sbjct: 227 FGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLEL 286
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + E+ + PD T AC L GR +H V+++++ D+ + +LI MY+
Sbjct: 287 FSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSS 346
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ A VF ++ +D P E TLV+V
Sbjct: 347 LGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSV 406
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+SA A I L G LH + + +V V +L+DMY+KC V A +F + K V
Sbjct: 407 LSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNV 466
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
VSW ++I G ++ S +AL F +MK+ ++P+ +T + VLSAC+R G G+
Sbjct: 467 VSWTSLILGLRINNRSFEALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHA 526
Query: 268 VRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+R D + + ++D+ GR A + K D W LL G K
Sbjct: 527 LRTGVGFDGFLPN--AILDMYVRCGRKVPALNQFNSQ--KKDVTAWNILLTGYAQQGQAK 582
Query: 327 LAELALEKLIELEPH 341
LA +K++ELE H
Sbjct: 583 LAVELFDKMLELEIH 597
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 156/336 (46%), Gaps = 45/336 (13%)
Query: 42 NVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR 101
N+ +R G E A++ +LE+ + + + L+ C A +EG R++E V
Sbjct: 66 NLELRELCLQGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSS 125
Query: 102 NKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----------------------- 138
+K V +G AL+ M+ + +++A VF K+ ERD
Sbjct: 126 SKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNL 185
Query: 139 ----------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
P+ T +V+ A ++ + +G+E+H R FE +V V AL+ MY K
Sbjct: 186 YHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVK 245
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGV 247
CG + AR LF+++ ++ +SWNAMI+GY +G + L+LF M++ V PD IT V
Sbjct: 246 CGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTV 305
Query: 248 LSACSRGGLFDEGRM--FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
SAC L D R+ V + ++ + GRL+EA + +M
Sbjct: 306 ASACE---LLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMES 362
Query: 306 KPDPGVWGALLNSCKLHGHVKLAELALE--KLIELE 339
K D W A++ S H KL A+E K++ELE
Sbjct: 363 K-DVVSWTAMIASLVSH---KLPFKAVETYKMMELE 394
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 28/255 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G GF L ++ +Y C A F+ ++++ WN+L+ YA G ++A+EL+
Sbjct: 530 GVGFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELF 588
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMYA 119
++LE+ + PD TF L ACS + EG + ++++NK+ + A ++D+
Sbjct: 589 DKMLELEIHPDEITFISLLCACSKSGMVTEGLE-YFNIMKNKYNLTPNLKHYACVVDILG 647
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELN---V 176
+ + +A + R P A +++A + + EL + + FE + V
Sbjct: 648 RAGQLDDAYDFIQDMPIR-PDAAIWGALLNA----CRIHRNVELGEIAAKRVFEKDNKSV 702
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRV-----VSW-------NAMITGYAMHGHST 224
L ++YA CG + +RE+ + SW +A ++G H S
Sbjct: 703 GYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSK 762
Query: 225 K---ALDLF-EKMKD 235
+ LD F KMK+
Sbjct: 763 EINGVLDGFCSKMKE 777
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/551 (38%), Positives = 323/551 (58%), Gaps = 39/551 (7%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNL---FLWNVLIRAYAWNGPYEVA 57
+GF +P++ TK S D + A L + + FL++ +IRAYA + +
Sbjct: 33 LGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVEDARVYDAFLFSTIIRAYAESSQSKHN 92
Query: 58 IELYYRL-LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
YY L L G+ P+ + FPF LKAC+ L + G+ +H +++ ++ D+FV ++
Sbjct: 93 AIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVH 152
Query: 117 MYAKCSCVVN-ARQVFDKILERDP---------------------------------SEA 142
MY CS + AR++FD++ + DP +
Sbjct: 153 MYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDV 212
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T+V+V+SA D+ AL G+ + + + R V++ ALVDM+AKCG V A LF +
Sbjct: 213 TMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNM 272
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR 261
++ +VSW ++I G AMHG +A+ LFE+MK + P+ I F+G+LSACS GL + GR
Sbjct: 273 SKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGR 332
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
+F M R + I P ++HY CMVDLL +G + EA + + +M ++P+P +W L+++C++
Sbjct: 333 QYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISACRV 392
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
HG +KL E ++LI EP NYV+LSNIY + +WE +K+R M +GI+K +
Sbjct: 393 HGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKIRVAMGKKGIQKVPGST 452
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMI 441
IE+ N+ H F+ GD SH +EI + + MK AGY P T VF D++ ++K + +
Sbjct: 453 MIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKRAGYAPTTTEVFLDIDEEDKEDAL 512
Query: 442 CCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF 501
HSE+LAIAF L+NTP G+ + ITKNL++C DCH A KFISKI REI +RD +R+HHF
Sbjct: 513 SRHSEKLAIAFALLNTPPGSPIRITKNLRVCGDCHSASKFISKIYNREIVMRDRSRFHHF 572
Query: 502 KDGICSCGDYW 512
+DG CSCGD+W
Sbjct: 573 RDGQCSCGDFW 583
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/398 (52%), Positives = 266/398 (66%), Gaps = 8/398 (2%)
Query: 123 CVVNARQVFDKILER-------DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELN 175
CV N R + L R +P+ T+ V+ A A++AAL GR H FS R F +
Sbjct: 264 CVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHD 323
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-K 234
V V +ALVDMYAKCG + AR +F+ + + VVSWNAMI GYAMHG + A+ LF M K
Sbjct: 324 VYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQK 383
Query: 235 DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLD 294
+ +PD +TF VL ACS+ GL +EGR +F M + + I P ++HY CMV LLG SG+LD
Sbjct: 384 CKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLD 443
Query: 295 EACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYA 354
EA DLI +M +PD +WG+LL SC+++G+V LAE+A EKL +LEP +AGNYV+LSNIYA
Sbjct: 444 EAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYA 503
Query: 355 RAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEG 414
W+GV ++R M + G+KK CSWIE+KNK H L+GD SHP I KL L
Sbjct: 504 SKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPMMTAITEKLNQLTI 563
Query: 415 RMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDD 474
M G+ P + V HDVE EK N++ HSE+LA+A GLI+T GT L + KNL+IC D
Sbjct: 564 EMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAVALGLISTRPGTPLRVIKNLRICGD 623
Query: 475 CHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
CH A+KFIS +REI+VRD NR+HHFKDG CSCGDYW
Sbjct: 624 CHEAMKFISSFEQREISVRDTNRFHHFKDGKCSCGDYW 661
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 125/284 (44%), Gaps = 35/284 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P +A+ L+H Y A +FDR+P++N+ W+ LI Y+ G E A L
Sbjct: 47 GLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLL 106
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ G+ P+ T+ +S + R + V AL+ M+++
Sbjct: 107 EQMRSAGVEPNVITWN------GLVSGLNRSGRALDAV------------TALVRMHSE- 147
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
F P + +SA D+ + G+++HG+ + L+ V TA
Sbjct: 148 -------GFF-------PDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTA 193
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPD 240
L+DMY KCG +F + V S NA++ G + + ++AL LF E + V+ +
Sbjct: 194 LIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELN 253
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMV 284
+++ +++ C + G E F +M + ++P+ C++
Sbjct: 254 VVSWTSIVACCVQNGRDLEAVDLFRTM-QSIGVEPNSVTIPCVL 296
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 37 NLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIH 96
N+ W ++ NG A++L+ + IG+ P++ T P L A + ++A+ GR H
Sbjct: 253 NVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAH 312
Query: 97 EDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAA 156
+R + DV+VG+AL+DMYAKC +AR +FD + R+ V+S +A I
Sbjct: 313 CFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRN--------VVSWNAMIG- 363
Query: 157 LPQGRELHGFS----------WRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
G +HG + + + + ++ T ++ ++ GL + R F ++++
Sbjct: 364 ---GYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGH 420
Query: 207 VVS-----WNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSAC 251
+S + M+T G +A DL +M E PD + +L +C
Sbjct: 421 GISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFE--PDSCIWGSLLGSC 468
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + LV +Y+ C +A +FD +P RN+ WN +I YA +G A++L+
Sbjct: 319 GFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLF 378
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRR 94
+ + PD TF L ACS EEGRR
Sbjct: 379 CSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRR 411
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A P R LH + + V ++L+ Y + G AR++F+++ EK VV
Sbjct: 25 SALKSCPAQPLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVV 84
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGG 255
W+A+I GY+ G + A L E+M+ V+P+ IT+ G++S +R G
Sbjct: 85 GWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSG 132
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 93/243 (38%), Gaps = 48/243 (19%)
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
LY+ L + PD P ALK+C A R +H + + D FV ++L+ Y
Sbjct: 6 SLYHFLRHVSFPPDPHLLPSALKSCPAQPL---ARALHAAAVVSGLAEDPFVASSLLHSY 62
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
+ AR VFD++ E+ NV
Sbjct: 63 IRLGATGAARSVFDRMPEK-------------------------------------NVVG 85
Query: 179 KTALVDMYAKCGLVKVARNLFEQLR----EKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
+AL+ Y+ G + A L EQ+R E V++WN +++G G + A+ +M
Sbjct: 86 WSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMH 145
Query: 235 DE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGR 292
E PD LSA G+ +V+ +D V T ++D+ G GR
Sbjct: 146 SEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACV--VTALIDMYGKCGR 203
Query: 293 LDE 295
DE
Sbjct: 204 ADE 206
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/530 (40%), Positives = 305/530 (57%), Gaps = 33/530 (6%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFT 75
+YS A +LFD +P RN+ +WN I +G AI+ + +G PD T
Sbjct: 102 MYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLIT 161
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL 135
F L AC+ ++ GR++H VIR+ +E DV V +ID+Y KC V A VF+ +
Sbjct: 162 FCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMG 221
Query: 136 ERDP-SEATLV--------------------------------TVISASADIAALPQGRE 162
R+ S T+V +VISA A I+ L GR
Sbjct: 222 RRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRS 281
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
+H + + E ++ V +ALVDMY KCG ++ +F ++ E+ +VSWNAMI+GYA G
Sbjct: 282 VHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGD 341
Query: 223 STKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTC 282
A+ LFE+M+ E +++T + VLSACSRGG G FESM Y I+P +HY C
Sbjct: 342 VDMAMTLFEEMQSEAVANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYAC 401
Query: 283 MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHD 342
+ D+LG +G ++ A + + +M ++P VWGALLN+C+++G +L ++A + L +L+P D
Sbjct: 402 IADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKD 461
Query: 343 AGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNC 402
+GN+V+LSN++A A W+ +RK M D GIKK CSW+ KNK H F + D SH
Sbjct: 462 SGNHVLLSNMFAAAGRWDEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERN 521
Query: 403 DEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTR 462
EI A L L M+ AGY+P T +D+E +EK + HSE++A+AFGLI P G
Sbjct: 522 SEIQAMLVKLRTEMQAAGYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVP 581
Query: 463 LLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ ITKNL+IC DCH A KFIS I REI VRD NR+H F+D CSC D+W
Sbjct: 582 IRITKNLRICGDCHSAFKFISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 156/368 (42%), Gaps = 39/368 (10%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFT 75
+YS D + A L P R + W LI NG + A+ + ++ + P++FT
Sbjct: 1 MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL 135
FP A KA +AL G++IH ++ D FVG + DMY+K A+++FD++
Sbjct: 61 FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120
Query: 136 ER---------------------------------DPSEATLVTVISASADIAALPQGRE 162
R +P T ++A AD L GR+
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
LHG R FE +V V ++D+Y KC V++A +F + + VSW M+ +
Sbjct: 181 LHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDE 240
Query: 223 STKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYT 281
KA +F K+ ++ V+SA + + GR V+ ++ + +
Sbjct: 241 KEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKAC-VEGDIFVGS 299
Query: 282 CMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPH 341
+VD+ G G +++ C+ + + + W A+++ G V +A E E++
Sbjct: 300 ALVDMYGKCGSIED-CEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFE---EMQSE 355
Query: 342 DAGNYVIL 349
NYV L
Sbjct: 356 AVANYVTL 363
>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/546 (39%), Positives = 332/546 (60%), Gaps = 34/546 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + L+++YS C + +A +LFD +P R+L WN ++ ++ NG E A+ L
Sbjct: 49 VGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVL 108
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ + G FT + AC+A + E +++H ++ +++VFVG AL+D+YAK
Sbjct: 109 FMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAK 168
Query: 121 CSCVVNARQVFDKILER-DPSEATLVT------------VISASADIAALP--------- 158
C V +A VF+ + ER D + +++V V+ A L
Sbjct: 169 CGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSA 228
Query: 159 -----------QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+G+++ S + N+ V ++L+DMYAKCG+++ A +F + EK V
Sbjct: 229 LSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNV 288
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V WNA+++G++ H S +A+ FEKM+ + P+ IT++ VLSACS GL ++GR +F+
Sbjct: 289 VLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDL 348
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M+R +++ P+V HY+CMVD+LG +G L EA D I +M +WG+LL SC+++ +++
Sbjct: 349 MIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLE 408
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
LAE+A + L E+EPH+AGN+V+LSNIYA WE VA+ R L+ + KK SWIE+K
Sbjct: 409 LAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIK 468
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
+K H+F+ G+ +HP EIY KL+ L G MK+ GY TE HDVE K ++ HSE
Sbjct: 469 HKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQELLRHHSE 528
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LA+ FG++ P G + I KNL+IC DCH +K S ITEREI VRD NR+HHFK+G C
Sbjct: 529 KLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTNRFHHFKNGYC 588
Query: 507 SCGDYW 512
SCG++W
Sbjct: 589 SCGEFW 594
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 3/181 (1%)
Query: 137 RDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
R + L ++ +SA A +G H R + L++MY+KCGLV+ AR
Sbjct: 16 RATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESAR 75
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGG 255
LF+++ + +VSWN M+ + +G KAL LF +M+ E T V+ AC+
Sbjct: 76 KLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKC 135
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
E + ++ +D +V T ++D+ G + +A +L+ + + W ++
Sbjct: 136 CVFECKQLHGFALKTA-LDSNVFVGTALLDVYAKCGLVKDA-NLVFECMPERSDVTWSSM 193
Query: 316 L 316
+
Sbjct: 194 V 194
>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Glycine max]
Length = 650
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/548 (39%), Positives = 324/548 (59%), Gaps = 44/548 (8%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLF----DRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
+P L TKL+ LYS C ++ A ++F ++ P+ + W + Y+ NG A+ LY
Sbjct: 106 NPTLKTKLITLYSVCGRVNEARRVFQIDDEKPPEEPV--WVAMAIGYSRNGFSHEALLLY 163
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK-WETDVFVGAALIDMYAK 120
+L + P NF F ALKACS L GR IH ++++ E D V AL+ +Y +
Sbjct: 164 RDMLSCCVKPGNFAFSMALKACSDLDNALVGRAIHAQIVKHDVGEADQVVNNALLGLYVE 223
Query: 121 CSCVVNARQVFDKILERDP---------------------------------SEATLVTV 147
C +VF+++ +R+ S TL T+
Sbjct: 224 IGCFDEVLKVFEEMPQRNVVSWNTLIAGFAGQGRVFETLSAFRVMQREGMGFSWITLTTM 283
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A + AL G+E+HG + R +V + +L+DMYAKCG + +F+++ K +
Sbjct: 284 LPVCAQVTALHSGKEIHGQILKSRKNADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKDL 343
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
SWN M+ G++++G +AL LF++M + ++P+ ITFV +LS CS GL EG+ F +
Sbjct: 344 TSWNTMLAGFSINGQIHEALCLFDEMIRYGIEPNGITFVALLSGCSHSGLTSEGKRLFSN 403
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+++D+ + PS++HY C+VD+LG SG+ DEA + + ++P +WG+LLNSC+L+G+V
Sbjct: 404 VMQDFGVQPSLEHYACLVDILGRSGKFDEALSVAENIPMRPSGSIWGSLLNSCRLYGNVA 463
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
LAE+ E+L E+EP++ GNYV+LSNIYA A WE V ++R++M G+KK CSWI++K
Sbjct: 464 LAEVVAERLFEIEPNNPGNYVMLSNIYANAGMWEDVKRVREMMALTGMKKDAGCSWIQIK 523
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKW--LEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
+K H F++G +S C Y K+ W L +K GYVP T V HD+ + KA +C H
Sbjct: 524 HKIHTFVAGGSSDFRCSAEYKKI-WNELSNAVKNLGYVPNTGVVLHDINEEMKAVWVCEH 582
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SERLA F LINT G + ITKNL++C DCH +K +SK+T R I +RD NR+HHF++G
Sbjct: 583 SERLAAVFALINTGAGMPIRITKNLRVCVDCHSWMKAVSKVTRRLIVLRDTNRFHHFENG 642
Query: 505 ICSCGDYW 512
CSC DYW
Sbjct: 643 SCSCKDYW 650
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 156 ALPQGRELHGFSWR--HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK--RVVSWN 211
+L GR+LH R +R N +KT L+ +Y+ CG V AR +F+ EK W
Sbjct: 85 SLEHGRKLHLHLLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQIDDEKPPEEPVWV 144
Query: 212 AMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACS 252
AM GY+ +G S +AL L+ M V+P + F L ACS
Sbjct: 145 AMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACS 186
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/569 (38%), Positives = 322/569 (56%), Gaps = 69/569 (12%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-EIGLVP 71
++ L+ C + A F+ + +R++ WN +I +G A++ + +L + L P
Sbjct: 179 MISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKP 238
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV------- 124
D F+ AL AC+ L + G++IH ++R ++ VG ALI MYAK V
Sbjct: 239 DRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRII 298
Query: 125 --------------------------VNARQVFDKILERD-------------------- 138
ARQ+F+ + + D
Sbjct: 299 EQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDA 358
Query: 139 -------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
P+ TL ++SAS+ + +L G+++H + R L+ V AL M
Sbjct: 359 IEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTM 418
Query: 186 YAKCGLVKVARNLFEQLREKR-VVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHIT 243
YAK G + AR +F LR+ R VSW +MI A HG +A++LFE+M ++PDHIT
Sbjct: 419 YAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHIT 478
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
+VGVLSAC+ GGL ++GR +F+ M + IDP++ HY CMVDL G +G L EA + M
Sbjct: 479 YVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENM 538
Query: 304 RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVA 363
++PD WG+LL+SCK++ +V LA++A E+L+ +EP+++G Y L+N+Y+ W+ A
Sbjct: 539 PMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAA 598
Query: 364 KLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVP 423
K+RKLM RG+KK SW++++NK H F D HP DEIY + + +K+ G+ P
Sbjct: 599 KIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAP 658
Query: 424 GTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFIS 483
TESV HD+E + K ++ HSE+LAIAFG+I+TP+ T L I KNL++C+DCH AIKFIS
Sbjct: 659 DTESVLHDLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFIS 718
Query: 484 KITEREITVRDVNRYHHFKDGICSCGDYW 512
K+ +REI VRD R+HHFKDG CSC DYW
Sbjct: 719 KLVDREIIVRDATRFHHFKDGSCSCKDYW 747
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 147/323 (45%), Gaps = 46/323 (14%)
Query: 17 YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTF 76
Y+ L AHQ+FD IP R+ W +I Y G +E AI+++ +++ ++P FT
Sbjct: 51 YAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTL 110
Query: 77 PFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILE 136
L +C+A + G+++H V++ V V +L++MYAK + A+ VFD++
Sbjct: 111 TNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKL 170
Query: 137 RDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
R+ S SW A++ ++ CG V +A
Sbjct: 171 RNTS--------------------------SW-----------NAMISLHMNCGRVDLAL 193
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK-MKD-EVQPDHITFVGVLSACSRG 254
FE L E+ +VSWN+MI G HG +AL F +KD ++PD + LSAC+
Sbjct: 194 AQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANL 253
Query: 255 GLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP-DPGVWG 313
G+ +VR D S ++ + SG ++ A +I Q + D +
Sbjct: 254 EKLSFGKQIHGYIVRTM-FDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFT 312
Query: 314 ALLNSCKLHGHVKLAELALEKLI 336
ALLN G+VKL ++ + I
Sbjct: 313 ALLN-----GYVKLGDITPARQI 330
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 132/275 (48%), Gaps = 40/275 (14%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G F L L++LY+ +AH LF+ +P + F WN ++ YA G E A
Sbjct: 4 LGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA--- 60
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+++ ++ V D+ ++ + + + E+ +I D+++
Sbjct: 61 -HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVK------------------- 100
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
DK+L P++ TL V+++ A + G+++H F + V V
Sbjct: 101 -----------DKVL---PTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVAN 146
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPD 240
+L++MYAK G +K+A+ +F++++ + SWNAMI+ + G AL FE + + D
Sbjct: 147 SLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSER---D 203
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
+++ +++ C++ G +E FF S+++D + P
Sbjct: 204 IVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKP 238
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/539 (38%), Positives = 321/539 (59%), Gaps = 35/539 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+ L+ +Y+ C L A +LFD +P R++ W +I YA N A+ L+ R+L
Sbjct: 110 VIQNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSD 169
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G P+ FT +K C +++ GR+IH + ++VFVG++L+DMYA+C + A
Sbjct: 170 GAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEA 229
Query: 128 RQVFDKI------------------------------LERD---PSEATLVTVISASADI 154
VFDK+ ++R+ P+E T ++S+ + +
Sbjct: 230 MLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSM 289
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L QG+ LH + +L V L+ MYAK G ++ A +F++L + VVS N+M+
Sbjct: 290 GCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSML 349
Query: 215 TGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
GYA HG +A F++M + ++P+ ITF+ VL+ACS L DEG+ +F ++R Y+I
Sbjct: 350 IGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYF-GLMRKYNI 408
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
+P V HY +VDLLG +G LD+A I +M ++P +WGALL + K+H + ++ A +
Sbjct: 409 EPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQ 468
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
++ EL+P G + +L+NIYA A WE VAK+RK+M D G+KK ACSW+EV+N H F+
Sbjct: 469 RVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFV 528
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
+ D +HP ++I+ + L ++KE GYVP T V V+ EK + HSE+LA++F
Sbjct: 529 ANDVAHPQKEKIHKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFA 588
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+NTP G+ + I KN+++C DCH AIK++S + +REI VRD NR+HHF DG CSCGDYW
Sbjct: 589 LLNTPPGSTIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 155/318 (48%), Gaps = 38/318 (11%)
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L PD + LK C+ L ++EG+ +H V+ + ++ D+ + +L+ MYA+C + AR
Sbjct: 70 LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGAR 129
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
++FD++ RD P+E TL +++ +A
Sbjct: 130 RLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMA 189
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+ GR++H W++ NV V ++LVDMYA+CG + A +F++L K VSWNA+I
Sbjct: 190 SYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIA 249
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GYA G +AL LF +M+ E +P T+ +LS+CS G ++G+ +++
Sbjct: 250 GYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKL 309
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
T ++ + SG + +A + + VK D ++L HG K A ++
Sbjct: 310 VGYVGNT-LLHMYAKSGSIRDA-EKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDE 367
Query: 335 LIE--LEPHDAGNYVILS 350
+I +EP+D +L+
Sbjct: 368 MIRFGIEPNDITFLSVLT 385
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/511 (43%), Positives = 304/511 (59%), Gaps = 46/511 (9%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ +Y C + +A +LFD++ R++ WN LI Y G EIG
Sbjct: 144 VGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEG-------------EIG 190
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D F R H +++ W A+I Y + A
Sbjct: 191 VAEDLFE-----------------RMEHRNIV--SW-------TAMISGYTQNGFAEQAL 224
Query: 129 QVFDKIL----ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVD 184
+FD++L E P+ T+V+V+ A A AAL +GR +H F+ LN V+TAL
Sbjct: 225 GLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAG 284
Query: 185 MYAKCGLVKVARNLFEQLRE--KRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDH 241
MYAKC + AR F+ + + K +++WN MIT YA HG +A+ +FE M + VQPD
Sbjct: 285 MYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDA 344
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
+TF+G+LS CS GL D G F M + ++P V+HY C+VDLLG +GRL EA +LI
Sbjct: 345 VTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELIS 404
Query: 302 QMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEG 361
QM ++ P VWGALL +C+ H ++++AELA +L LEP ++GNYV+LSN+YA A WE
Sbjct: 405 QMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEE 464
Query: 362 VAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGY 421
V KLR L+ +G+KKS CSWIE+ K+H F+ D SHP EIY L+ L ++K AGY
Sbjct: 465 VKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGY 524
Query: 422 VPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKF 481
+P T V HD+ +EK + HSE+LAIAFGL+NT G L +TKNL+IC DCH A KF
Sbjct: 525 IPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRICGDCHAATKF 584
Query: 482 ISKITEREITVRDVNRYHHFKDGICSCGDYW 512
ISKI EREI VRD+NR+H FKDG CSCGDYW
Sbjct: 585 ISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 615
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 138/272 (50%), Gaps = 46/272 (16%)
Query: 58 IELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDM 117
+E Y R+ +GL+ DNFT PF LK+C+ LS + GR +H +R E D +VGA+LIDM
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151
Query: 118 YAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
Y KC + +AR++FDK++ RD + SW
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMA--------------------------SW--------- 176
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM---K 234
AL+ Y K G + VA +LFE++ + +VSW AMI+GY +G + +AL LF++M
Sbjct: 177 --NALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDG 234
Query: 235 DEVQPDHITFVGVLSACSRGGLFDEGRMF--FESMVRDYHIDPSVQHYTCMVDLLGHSGR 292
E++P+ +T V VL AC++ + GR F + + H++ SVQ T + +
Sbjct: 235 SEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGI-GLHLNSSVQ--TALAGMYAKCYS 291
Query: 293 LDEA-CDLIMQMRVKPDPGVWGALLNSCKLHG 323
L EA C M + + W ++ + HG
Sbjct: 292 LVEARCCFDMIAQNGKNLIAWNTMITAYASHG 323
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 6/145 (4%)
Query: 2 GFGFH--PVLATKLVHLYSACDCLHNAHQLFDRIPQ--RNLFLWNVLIRAYAWNGPYEVA 57
G G H + T L +Y+ C L A FD I Q +NL WN +I AYA +G A
Sbjct: 269 GIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEA 328
Query: 58 IELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDV-IRNKWETDVFVGAALID 116
+ ++ +L G+ PD TF L CS I+ G D+ + E V A ++D
Sbjct: 329 VSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVD 388
Query: 117 MYAKCSCVVNARQVFDKI-LERDPS 140
+ + +V A+++ ++ ++ PS
Sbjct: 389 LLGRAGRLVEAKELISQMPMQAGPS 413
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/576 (37%), Positives = 325/576 (56%), Gaps = 65/576 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G ++ + T LV +Y C L A +FD P+ ++ WN++I AY G +E + L+
Sbjct: 148 GLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLF 207
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + ++P T L ACS L + G+++H V K E+++ + A+IDMYA C
Sbjct: 208 LVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADC 267
Query: 122 ---------------------SCVVN----------ARQVFDKILERD------------ 138
+ +V+ AR FDK+ E+D
Sbjct: 268 GEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYI 327
Query: 139 ---------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
P E T+V+V++A A + AL G + + R++ + ++
Sbjct: 328 RSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLF 387
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDE 236
V+ AL+DMY KCG V A ++F ++ ++ +W AMI G A++GH KALD+F M K
Sbjct: 388 VRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKAS 447
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+ PD IT++GVLSAC+ GL D+GR +F M + I+P++ HY C+VDLL +GRL EA
Sbjct: 448 ILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEA 507
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARA 356
++I M +K + VWGALL C+++ +AE+ +++++ELEP + YV+L NIYA
Sbjct: 508 YEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAAC 567
Query: 357 ANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRM 416
W + +LR++M+D+GIKK+ CS IE+ + H F++GD SHP I AKL + +
Sbjct: 568 KRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDL 627
Query: 417 KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCH 476
K AGY P VF D+ ++K N + HSE+LAIAFGLIN+P G + ITKNL++C DCH
Sbjct: 628 KLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCH 687
Query: 477 IAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
K +SK+ RE+ VRD R+HHFK G+CSC DYW
Sbjct: 688 NMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 182/394 (46%), Gaps = 77/394 (19%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHN------AHQLFDRIPQRNLFLWNVLIRAYAWNGPYE 55
G +PVL +++ + C C H A +LFD IP+ NLF+WN +IR Y+ +
Sbjct: 45 GLNANPVLQNRVM---TFC-CTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQ 100
Query: 56 VAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALI 115
+ + LY +L G+ PD +TFPF K + A+E GR++H V+++ + +VFV AL+
Sbjct: 101 LGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALV 160
Query: 116 DMYAKCSCVVNARQVFDKILERD---------------------------------PSEA 142
MY C + AR VFD + D P+
Sbjct: 161 QMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTV 220
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC------------- 189
TLV V+SA + + L G+++H + + E N+ ++ A++DMYA C
Sbjct: 221 TLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSM 280
Query: 190 ------------------GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
G + VARN F+++ EK VSW AMI GY +AL+LF
Sbjct: 281 NNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFR 340
Query: 232 KMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
M+ V+PD T V VL+AC+ G + G + + + I + ++D+
Sbjct: 341 NMQATNVKPDEFTMVSVLTACAHLGALELGE-WIRTYIDRNKIKNDLFVRNALIDMYFKC 399
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
G +D+A + +M + D W A++ ++GH
Sbjct: 400 GDVDKAESIFREMSQR-DKFTWTAMIVGLAVNGH 432
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/539 (38%), Positives = 323/539 (59%), Gaps = 35/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T L+++Y+AC L +A LF+R+ RN +W +I Y N A+ LY ++ E G
Sbjct: 116 IETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDG 175
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
PD T + AC+ L + G ++H + + +G+AL++MYAKC + AR
Sbjct: 176 FSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTAR 235
Query: 129 QVFDKILERD----------------------------------PSEATLVTVISASADI 154
QVFDK+ ++D P+E T++ VISA A +
Sbjct: 236 QVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQL 295
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L GR +H + R + +V + +L+DM++KCG + A+ +F+ + K ++SWN+M+
Sbjct: 296 GDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMV 355
Query: 215 TGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
G+A+HG +AL F M+ ++QPD ITF+GVL+ACS GL EG+ F + Y +
Sbjct: 356 NGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGV 415
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
+HY CMVDLL +G L EA + I M ++PD +WG++L +C+++ +++L E A
Sbjct: 416 RLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAAR 475
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
L++LEP + G Y++LSNIYA+ W V K+R+LM ++GI+K+ CS + + N AH+FL
Sbjct: 476 FLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFL 535
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
+GD SHP EI L+ + ++K AGYV T V ++++++K + HSE+LA+ +G
Sbjct: 536 AGDCSHPEIAEISIMLRQVREKLKLAGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYG 595
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+ + G R++I KNL++C DCH IK +SKI +R+IT+RD NR+HHFKDG CSC DYW
Sbjct: 596 LLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 194/385 (50%), Gaps = 50/385 (12%)
Query: 2 GFGFH-PVLATKLVHLYSACDC-LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIE 59
GF H P L + H+ S + A+ +F + ++ WN ++RA+ + A++
Sbjct: 5 GFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQ 64
Query: 60 LYYRLLEIGL-VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
Y +LE VPD FTFP LK C+ L + G+ +H V++ +D+++ L++MY
Sbjct: 65 SYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMY 124
Query: 119 AKCSCVVNARQVFDKILERD---------------------------------PSEATLV 145
A C + +AR +F+++ R+ P E T+
Sbjct: 125 AACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMA 184
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKV----KTALVDMYAKCGLVKVARNLFEQ 201
T++SA A++ L G +LH H E+++K+ +ALV+MYAKCG +K AR +F++
Sbjct: 185 TLVSACAELKDLGVGMKLHS----HIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDK 240
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMK--DEVQPDHITFVGVLSACSRGGLFDE 259
L +K V +W+A+I GY + ST+AL LF ++ ++P+ +T + V+SAC++ G +
Sbjct: 241 LSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLET 300
Query: 260 GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC 319
GR + + R SV ++D+ G +D A + M K D W +++N
Sbjct: 301 GRWVHDYITRTQK-GHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYK-DLISWNSMVNGF 358
Query: 320 KLHGHVK--LAELALEKLIELEPHD 342
LHG + LA+ L + +L+P +
Sbjct: 359 ALHGLGREALAQFRLMQTTDLQPDE 383
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/523 (40%), Positives = 310/523 (59%), Gaps = 36/523 (6%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A QLFD + + FLWN +++ Y NG + A+ +Y ++ +G+ PD FTFPF +KAC+
Sbjct: 88 ARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIKACAE 147
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
L+ + G +H V+++ E V L+ MY K + A +F ++ERD
Sbjct: 148 LAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWNAL 207
Query: 139 --------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
P T+V+ +SA + L G E++ F+
Sbjct: 208 IAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAREEGI 267
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
+ N+ V A +DM AKCG + A NLF+++ ++ V+SW+ +I GYA++G S KAL LF +
Sbjct: 268 DSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALALFSR 327
Query: 233 MKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR--DYHIDPSVQHYTCMVDLLGH 289
MK++ VQP+++TF+ VLSACS G +EG +F M + D +I P +HY CMVDLLG
Sbjct: 328 MKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMVDLLGR 387
Query: 290 SGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVIL 349
SG L+EA + I M ++ DPG+WGALL +C +H ++KL + + L EL P A +V+L
Sbjct: 388 SGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQNIKLGQHVADLLFELAPEIASYHVLL 447
Query: 350 SNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKL 409
SN+YA A W V K+R+ M +G +K A S +E + H GD SHP I AKL
Sbjct: 448 SNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQSASILAKL 507
Query: 410 KWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNL 469
+ L +MK GY+P T+SVFHDVE++EK + + HSE+LAIAF LIN + + KNL
Sbjct: 508 EDLLKQMKSMGYIPETDSVFHDVEDEEKESTLSTHSEKLAIAFSLINGSPKFPIRVMKNL 567
Query: 470 KICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+IC DCH K +S+IT REI +RD NR+HHFK+GICSC D+W
Sbjct: 568 RICGDCHTFCKLVSRITMREIIMRDKNRFHHFKNGICSCKDFW 610
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVL 248
G + AR LF+++ + R WN ++ GY +G KA+ ++ KM+ V+PD TF V+
Sbjct: 83 GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142
Query: 249 SACS 252
AC+
Sbjct: 143 KACA 146
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/538 (39%), Positives = 327/538 (60%), Gaps = 36/538 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y++ + +A ++FD IP +++ WN +I YA G + A++L+ +++ +
Sbjct: 173 TALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVK 232
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD T + AC+ +I+ GR++H + + +++ + ALID+Y+KC V A +
Sbjct: 233 PDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGL 292
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F + +D P++ T+++++ A A + A+
Sbjct: 293 FQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAI 352
Query: 158 PQGRELHGF-SWRHRFELNVK-VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
GR +H + R + N ++T+L+DMYAKCG ++ A +F + + + + NAMI
Sbjct: 353 DFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIF 412
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+AMHG + A D+F +M K+ ++PD ITFVG+LSACS G+ D GR F SM ++Y I
Sbjct: 413 GFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKIT 472
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY CM+DLLGH G EA ++I M ++PD +W +LL +CK+HG+V+L E +K
Sbjct: 473 PKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQK 532
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
LI++EP + G+YV+LSNIYA A W VA +R L+ D+G+KK CS IE+ + H F+
Sbjct: 533 LIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFII 592
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD HP EIY L+ +E ++EAG+VP T V ++E + K + HSE+LAIAFGL
Sbjct: 593 GDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFGL 652
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I+T GT+L I KNL++C +CH A K ISKI +REI RD R+HHF+DG+CSC DYW
Sbjct: 653 ISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 190/417 (45%), Gaps = 100/417 (23%)
Query: 21 DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
D L A +F+ I + NL +WN + R +A + AI+LY ++ +GL+P+++TFPF L
Sbjct: 51 DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLL 110
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS------------------ 122
K+C+ L +EG++IH V++ +E D++V +LI MY K
Sbjct: 111 KSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVV 170
Query: 123 -------------CVVNARQVFDKILERD------------------------------- 138
+ +A+++FD+I +D
Sbjct: 171 SYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTN 230
Query: 139 --PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
P E+T+VTV+SA A ++ GR++H + H N+K+ AL+D+Y+KCG V+ A
Sbjct: 231 VKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETAC 290
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGG 255
LF+ L K V+SWN MI GY +AL LF++M + P+ +T + +L AC++ G
Sbjct: 291 GLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLG 350
Query: 256 LFDEGRMFF------------ESMVRDYHID---------------PSVQHYT---CMVD 285
D GR S +R ID S+ H T C
Sbjct: 351 AIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAM 410
Query: 286 LLGHS--GRLDEACDLIMQMR---VKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+ G + GR + A D+ +MR ++PD + LL++C G + L + +
Sbjct: 411 IFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQ 467
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 147/329 (44%), Gaps = 45/329 (13%)
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
++ ++++ GL N+ L+ C LS +G V E ++ + + +A
Sbjct: 21 IHAQMIKTGLHNTNYALSRLLEFC-ILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGHA 79
Query: 120 KCSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
S V+A +++ ++ P+ T ++ + A + +G+++HG + +EL++
Sbjct: 80 LSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLY 139
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH--------------- 222
V T+L+ MY K G K A +F+ + VVS+ A+ITGYA G+
Sbjct: 140 VHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKD 199
Query: 223 ----------------STKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+ +ALDLF E MK V+PD T V V+SAC++ G GR
Sbjct: 200 VVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQ-VH 258
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
S + D+ + +++ ++DL G ++ AC L + K D W ++ + H+
Sbjct: 259 SWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNK-DVISWNTMIGG---YTHL 314
Query: 326 KLAELALEKLIEL-----EPHDAGNYVIL 349
L + AL E+ P+D IL
Sbjct: 315 NLYKEALLLFQEMLRSGENPNDVTMLSIL 343
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 142/325 (43%), Gaps = 28/325 (8%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G G + + L+ LYS C + A LF + +++ WN +I Y Y+ A+ L+
Sbjct: 265 GLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLF 324
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDV-IRNKWETDV-FVGAALIDMYA 119
+L G P++ T L AC+ L AI+ GR IH + R K T+ + +LIDMYA
Sbjct: 325 QEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYA 384
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALP-QGRELHGFSWRHRFELN--V 176
KC + A QVF+ + R T+ + +A I GR F R N
Sbjct: 385 KCGDIEAAHQVFNSMHHR--------TLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIE 436
Query: 177 KVKTALVDMYAKC---GLVKVARNLFEQLREKRVVS-----WNAMITGYAMHGHSTKALD 228
V + + C G++ + R +F + + ++ + MI G +A +
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEE 496
Query: 229 LFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
+ M ++PD + + +L AC G + G F + +++ +P Y + ++
Sbjct: 497 MINTMT--MEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPG--SYVLLSNIYA 552
Query: 289 HSGRLDEACD---LIMQMRVKPDPG 310
+GR +E + L+ +K PG
Sbjct: 553 TAGRWNEVANIRALLNDKGMKKVPG 577
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/515 (41%), Positives = 306/515 (59%), Gaps = 42/515 (8%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + L +VHLY++C + A LF+++PQR++ WN++I G +E A +L
Sbjct: 157 VGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDL 216
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+ E +V ++I Y +
Sbjct: 217 FSRMPE---------------------------------------RNVRSWTSMIAGYVQ 237
Query: 121 CSCVVNARQVFDKILERDP--SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
C A +F K+ E +E T+V V++A AD+ AL G +H +S RH F+ NV++
Sbjct: 238 CGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRI 297
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EV 237
L+DMY KCG ++ A +FE++ E+ VVSW+AMI G AMHG + +AL LF M +
Sbjct: 298 SNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGI 357
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
+P+ +TF+G+L ACS GL EGR FF SM RDY I P ++HY CMVDLL +G L EA
Sbjct: 358 EPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAH 417
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAA 357
+ I+ M +KP+ VWGALL +C++H +V++AE A++ L+EL+P + G YV+LSNIYA A
Sbjct: 418 EFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAG 477
Query: 358 NWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK 417
WE A++RK M DR +KK+ S I V H F++G+ SHP+ ++I+ + + L M+
Sbjct: 478 RWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMR 537
Query: 418 EAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHI 477
GYVP T V D+E EK + HSE+LA+ FGL+NTP T + I KNL+IC+DCH
Sbjct: 538 LKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHS 597
Query: 478 AIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
A K IS I REI VRD NR+H F D CSC DYW
Sbjct: 598 AFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 632
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 154/338 (45%), Gaps = 41/338 (12%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
N +Q+ + PQ + L L+R + N P+E+ +++ ++++ C+
Sbjct: 15 NRNQIHNVKPQSSETLKIDLLRNF--NSPFELR-QVHAQIIKTNAPLSILPLTRVGLVCA 71
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD--PSEA 142
+ ++I + V + K ET FV + + A+ ++A +F ++ + D P
Sbjct: 72 FTPSFHYAQQIFKCVEKQKPET--FVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTF 129
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T +V+ A ++ L GR LHG + F N+ ++ +V +YA CG + AR LFE++
Sbjct: 130 TCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKM 189
Query: 203 REKRVVSWN-------------------------------AMITGYAMHGHSTKALDLFE 231
++ VV+WN +MI GY G + +A+ LF
Sbjct: 190 PQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFA 249
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
KM++ V+ + +T V VL+AC+ G D G E R + +V+ ++D+
Sbjct: 250 KMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNR-HGFKRNVRISNTLIDMYVKC 308
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
G L+EAC + +M + W A++ +HG + A
Sbjct: 309 GCLEEACKVFEEMEERTVVS-WSAMIGGLAMHGRAEEA 345
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/582 (37%), Positives = 316/582 (54%), Gaps = 71/582 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF V+AT L+++Y C H A ++FD++ +R++ WNV+I Y NG + A+ELY
Sbjct: 237 GFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELY 296
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+L G TF L ACS++ A+ +GR +H ++ +++V V AL++MYAKC
Sbjct: 297 QKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKC 356
Query: 122 SC------VVNA----------------------------RQVFDKILERD--------- 138
V NA R+VFD++ RD
Sbjct: 357 GSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMIT 416
Query: 139 -------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFE 173
P T + V+ A A + L + + LH E
Sbjct: 417 TYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELE 476
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
NV V L++MYA+CG ++ A LF +EK VVSW AM+ ++ +G +ALDLF++M
Sbjct: 477 SNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEM 536
Query: 234 KDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGR 292
E V+PD +T+ +L C+ GG ++G +F M + + P+ H+ MVDLLG SGR
Sbjct: 537 DLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGR 596
Query: 293 LDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNI 352
L +A +L+ M +PDP W L +C++HG ++L E A E++ EL+P Y+ +SNI
Sbjct: 597 LFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNI 656
Query: 353 YARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWL 412
YA WE VA +RK M +RG+KK S+IEV K H F SG HP DEI +L L
Sbjct: 657 YAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRL 716
Query: 413 EGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINT-PDGTRLLITKNLKI 471
G M+ AGYVP T++V HDV EK M+ HSE++AIAFGL+++ G + + KNL++
Sbjct: 717 HGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRV 776
Query: 472 CDDCHIAIKFISKITEREITVRDVNRYHHF-KDGICSCGDYW 512
C DCH A KFI++I R+I VRD NR+H F DG CSCGDYW
Sbjct: 777 CSDCHTATKFIARIAGRDIIVRDCNRFHRFSSDGKCSCGDYW 818
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 201/418 (48%), Gaps = 40/418 (9%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEVAIEL 60
F ++ L+ +Y CD L +A +F+ + QRN+ WN +I AYA NG A+ L
Sbjct: 38 FERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVL 97
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
Y+R+ GL D+ TF L ACS+L+ +GR IH V + ++ + AL+ MYA+
Sbjct: 98 YWRMNLQGLGTDHVTFVSVLGACSSLA---QGREIHNRVFYSGLDSFQSLANALVTMYAR 154
Query: 121 CSCVVNARQVFDKILERD--------------------------------PSEATLVTVI 148
V +A+++F + RD P+ T + VI
Sbjct: 155 FGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCDVKPNSTTYINVI 214
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
S + LP+GR++H + F+ ++ V TAL++MY KCG AR +F++++++ +V
Sbjct: 215 SGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMV 274
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWN MI Y ++G +AL+L++K+ E + TFV +L ACS +GR+ S
Sbjct: 275 SWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRL-VHSH 333
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ + +D V T +V++ G L+EA + M+ + D W L+ + +G+ K
Sbjct: 334 ILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNR-DAVAWSTLIGAYASNGYGKD 392
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
A A + L D ++ + Y + K+ + M K A ++I V
Sbjct: 393 ARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAV 450
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 191/413 (46%), Gaps = 76/413 (18%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
LA LV +Y+ + +A ++F + R+ WN +I A++ +G + A+ ++ + ++
Sbjct: 144 LANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIF-KEMKCD 202
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P++ T+ + S + EGR+IH +++ N ++TD+ V ALI+MY KC AR
Sbjct: 203 VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAR 262
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+VFDK+ +RD ++AT V+++ A + +
Sbjct: 263 EVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVK 322
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLV----------------------- 192
AL QGR +H + V V TALV+MYAKCG +
Sbjct: 323 ALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIG 382
Query: 193 -----------KVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE--VQP 239
+ AR +F++L + +SWNAMIT Y +G + A+ +F +M ++P
Sbjct: 383 AYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKP 442
Query: 240 DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
D +TF+ VL AC+ G E + + + + ++ +V ++++ G L+EA L
Sbjct: 443 DAVTFIAVLEACASLGRLSEVKA-LHAQISESELESNVVVTNTLINMYARCGSLEEAERL 501
Query: 300 IMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE---PHDAGNYVIL 349
+ K W A++ + +G A L L + ++LE P D IL
Sbjct: 502 FAAAKEKTVVS-WTAMVAAFSQYGRYAEA-LDLFQEMDLEGVKPDDVTYTSIL 552
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 168/346 (48%), Gaps = 39/346 (11%)
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PDN TF L +CS+ + EGR +HE + +++E D VG ALI MY KC +V+AR V
Sbjct: 5 PDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 131 FDKILERD------------------PSEATL--------------VTVISASADIAALP 158
F+ + R +EA + VT +S ++L
Sbjct: 65 FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA 124
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
QGRE+H + + + ALV MYA+ G V A+ +F+ L+ + SWNA+I ++
Sbjct: 125 QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHS 184
Query: 219 MHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
G + AL +F++MK +V+P+ T++ V+S S + EGR +V + D +
Sbjct: 185 QSGDWSGALRIFKEMKCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVAN-GFDTDLV 243
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
T ++++ G G EA ++ +M+ K D W ++ L+G A L L + +++
Sbjct: 244 VATALINMYGKCGSSHEAREVFDKMK-KRDMVSWNVMIGCYVLNGDFHEA-LELYQKLDM 301
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKL---MIDRGIKKSIACS 381
E +S I ++ + +A+ R + +++RG+ +A +
Sbjct: 302 EGFKRTKATFVS-ILGACSSVKALAQGRLVHSHILERGLDSEVAVA 346
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 12/187 (6%)
Query: 135 LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV 194
++R P T +TV+ + + + +GR LH RFE + V AL+ MY KC +
Sbjct: 1 MDRQPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVD 60
Query: 195 ARNLFEQL--REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSAC 251
AR++FE + R++ VVSWNAMI YA +GHST+AL L+ +M + + DH+TFV VL AC
Sbjct: 61 ARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC 120
Query: 252 SRGGLFDE--GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
S E R+F+ + D +V + G + +A + ++ + D
Sbjct: 121 SSLAQGREIHNRVFYSGL------DSFQSLANALVTMYARFGSVGDAKRMFQSLQTR-DE 173
Query: 310 GVWGALL 316
W A++
Sbjct: 174 TSWNAVI 180
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/541 (39%), Positives = 315/541 (58%), Gaps = 35/541 (6%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P +A L+++Y+ L AH++F+ +P +N +W V+I+ + EL+ R+
Sbjct: 148 PYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRR 207
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAKCSCVV 125
G D F ++AC + A +EG+ H I+ + +++ F+ +L+DMY KC +
Sbjct: 208 SGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLD 267
Query: 126 NARQVFDKILERD---------------------------------PSEATLVTVISASA 152
A ++F++I RD P+ T +++ A +
Sbjct: 268 FALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACS 327
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+ +L QGR +HG+ R+ EL+VK T+ +DMYAKCG + A +F Q+ EK V SW+
Sbjct: 328 SLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWST 387
Query: 213 MITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
MI G+ MHG +AL+LF +M+ Q P+ +TFV VLSACS G +EG F+SM RDY
Sbjct: 388 MINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDY 447
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
I P +HY CMVDLLG +G++DEA I M +P WGALL +C++H +LAE
Sbjct: 448 GITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEV 507
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHA 391
+KL+ LE +G YV+LSNIYA WE V K R M ++GI K + + IE++ K +
Sbjct: 508 AKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYL 567
Query: 392 FLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIA 451
F S D +I + L+ RM+E GYVP V HDV+++ K ++C HSE+LAI
Sbjct: 568 FSSEDRFAYKNTQIESLWNSLKERMRELGYVPDLRFVLHDVDDEVKQEVLCGHSEKLAIV 627
Query: 452 FGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
FGL+N+ +G + ITKN+++C DCH A KFIS IT R+I +RDV R+HH +DG+CSCGDY
Sbjct: 628 FGLLNSGEGMPIRITKNMRVCGDCHTASKFISLITRRKIIMRDVKRFHHVQDGVCSCGDY 687
Query: 512 W 512
W
Sbjct: 688 W 688
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 194/414 (46%), Gaps = 57/414 (13%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
F P++ + L S LH A + F+ I NL WN ++ +++ N + ++L+ R+
Sbjct: 49 FGPMIFGAYIQLGS----LHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRM 104
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
L+ G + D+F FA+KAC LS + + H I+ + E D +V AL+++Y + +
Sbjct: 105 LKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSL 164
Query: 125 VNARQVFDKI-----------------------------------LERDPSEATLVTVIS 149
A +VF+++ E DP + +I
Sbjct: 165 EEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDP--FVVEGLIQ 222
Query: 150 ASADIAALPQGRELHGFSWRHRF-ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A ++ A +G+ HG + F + N ++T+LVDMY KCG + A LFE++ + VV
Sbjct: 223 ACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVV 282
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
W+A+I G+A +G + +++ +F +M D V P+ +TF ++ ACS G +GR M
Sbjct: 283 VWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYM 342
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGHV 325
+R+ ++ V++YT +D+ G + A + Q+ P+ V W ++N +HG
Sbjct: 343 IRN-GVELDVKNYTSFIDMYAKCGCIVTAYRVFCQI---PEKNVFSWSTMINGFGMHG-- 396
Query: 326 KLAELALEKLIELE-----PHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
L AL E+ P+ +LS EG + + + D GI
Sbjct: 397 -LCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGI 449
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/545 (37%), Positives = 321/545 (58%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF ++A V Y+ C L A ++F + + + WN LI A+A NG +++L+
Sbjct: 431 GFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLF 490
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+++ G+ PD FT L AC+ L + G+ IH ++RN E D F+G +L+ +Y +C
Sbjct: 491 LVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQC 550
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
S ++ + +FDK+ + P E + V+
Sbjct: 551 SSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVL 610
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A + ++AL G+E+H F+ + + V AL+DMYAKCG ++ ++N+F+++ EK
Sbjct: 611 GACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEA 670
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEV-QPDHITFVGVLSACSRGGLFDEGRMFFESM 267
WN +I GY +HGH KA++LFE M+++ +PD TF+GVL AC+ GL EG + M
Sbjct: 671 VWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQM 730
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
Y + P ++HY C+VD+LG +G+L EA L+ +M +PD G+W +LL+SC+ +G +++
Sbjct: 731 QNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEI 790
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E +KL+ELEP+ A NYV+LSN+YA W+ V K+R+ M + G+ K CSWIE+
Sbjct: 791 GEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGG 850
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ FL D S +I LE ++ + GY P T V H++E + K ++ HSE+
Sbjct: 851 MVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDTSCVLHELEEEGKIKILKSHSEK 910
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAI+FGL+NT GT L + KNL+IC DCH AIK +SK+ +R+I VRD R+HHFK+G+C+
Sbjct: 911 LAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKVVKRDIIVRDNKRFHHFKNGLCT 970
Query: 508 CGDYW 512
CGD+W
Sbjct: 971 CGDFW 975
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 146/284 (51%), Gaps = 39/284 (13%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE- 66
VL+T+++ +YSAC ++ +FD +++LFL+N L+ Y+ N + AI L+ LL
Sbjct: 129 VLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSA 188
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
L PDNFT P KAC+ ++ +E G +H ++ +D FVG ALI MY KC V +
Sbjct: 189 TDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVES 248
Query: 127 ARQVFDKILERD------------------------------------PSEATLVTVISA 150
A +VF+ + R+ P AT+VTVI A
Sbjct: 249 AVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPA 308
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
A + + G +HG +++ V V +LVDMY+KCG + AR LF+ K VVSW
Sbjct: 309 CAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSW 368
Query: 211 NAMITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACS 252
N +I GY+ G +L ++M+ E V+ + +T + VL ACS
Sbjct: 369 NTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACS 412
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 142/300 (47%), Gaps = 38/300 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL--- 65
+ L+ +Y C + +A ++F+ + RNL WN ++ A + NG + ++ RLL
Sbjct: 232 VGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISE 291
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
E GLVPD T + AC+A+ + G +H + +V V +L+DMY+KC +
Sbjct: 292 EEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLG 351
Query: 126 NARQVFD------------------------------KILERDP----SEATLVTVISAS 151
AR +FD + ++R+ +E T++ V+ A
Sbjct: 352 EARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPAC 411
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+ L +E+HG+++RH F + V A V YAKC + A +F + K V SWN
Sbjct: 412 SGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWN 471
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
A+I +A +G K+LDLF M D + PD T +L AC+R G+ M+R+
Sbjct: 472 ALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRN 531
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 107/256 (41%), Gaps = 40/256 (15%)
Query: 80 LKACSALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD 138
L+AC I GR++H V +K DV + +I MY+ C ++R VFD E+D
Sbjct: 99 LRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKD 158
Query: 139 ----------------------------------PSEATLVTVISASADIAALPQGRELH 164
P TL V A A +A + G +H
Sbjct: 159 LFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVH 218
Query: 165 GFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST 224
+ + + V AL+ MY KCG V+ A +FE +R + +VSWN+++ + +G
Sbjct: 219 ALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFG 278
Query: 225 KALDLFEKM----KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHY 280
+ +F+++ ++ + PD T V V+ AC+ G G M + I V
Sbjct: 279 ECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMG-MVVHGLAFKLGITEEVTVN 337
Query: 281 TCMVDLLGHSGRLDEA 296
+VD+ G L EA
Sbjct: 338 NSLVDMYSKCGYLGEA 353
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 138 DPSEATLVTVISASADIAALPQGRELHGF-SWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
D S+ + ++ A + GR++H S H+ +V + T ++ MY+ CG +R
Sbjct: 89 DISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSR 148
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACS 252
+F+ +EK + +NA+++GY+ + A+ LF ++ ++ PD+ T V AC+
Sbjct: 149 GVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACA 206
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/546 (39%), Positives = 325/546 (59%), Gaps = 38/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
F VLAT + +++ D A +F ++ + F +N +IR Y N +E AI LY
Sbjct: 64 SFCSSSVLATCALSDWNSMD---YACSIFQQLDEPTTFDFNTMIRGYVNNMNFENAIYLY 120
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+L+ + PDNFT+P LKAC+ L+ I+EG +IH V + E DV+V +LI+MY KC
Sbjct: 121 NDMLQREVEPDNFTYPVVLKACARLAVIQEGMQIHGHVFKLGLEDDVYVQNSLINMYGKC 180
Query: 122 SCVVNARQVFDKILERD----------------------------------PSEATLVTV 147
+ + +F ++ ++ E+ LV V
Sbjct: 181 RDIEMSCAIFRRMEQKSVASWSAIIAAHASLAMWWECLALFEDMSREGCWRAEESILVNV 240
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+SA + A GR HG ++ ELNV V T+L+DMY KCG ++ LF+ + K
Sbjct: 241 LSACTHLGAFHLGRCAHGSLLKNITELNVAVMTSLMDMYVKCGSLQKGLCLFQNMTRKNQ 300
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
+S++ +I+G +HG+ +AL +F +M +E ++PD +T+V VLSACS GL DEG F+
Sbjct: 301 LSYSVIISGLGLHGYGRQALQIFSEMVEEGLEPDDVTYVSVLSACSHSGLVDEGLDLFDK 360
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M +Y I+P++QHY CMVDL G +G L+EA L+ M +K + +W +LL++CK+H ++K
Sbjct: 361 MKFEYRIEPTMQHYGCMVDLKGRAGLLEEAFQLVQSMPIKANDVLWRSLLSACKVHDNLK 420
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
L E+A E L L H+ +Y++LSN+YARA WE AK+R MI+RG+ ++ S +EVK
Sbjct: 421 LGEIAAENLFRLSSHNPSDYLVLSNMYARAQQWENAAKIRTKMINRGLIQTPGYSLVEVK 480
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
+K + F+S D S+ IY + +E +++ GY+P T V DV+ +EK + HS+
Sbjct: 481 SKVYKFVSQDKSYCKSGNIYKMIHQMEWQLRFEGYMPDTSQVMLDVDEEEKGERLKGHSQ 540
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LAIAF LI+T G+ + I +NL++C+DCH K +S I EREITVRD NR+HHFKDG C
Sbjct: 541 KLAIAFALIHTSQGSAIRIIRNLRMCNDCHSYTKLVSMIYEREITVRDRNRFHHFKDGNC 600
Query: 507 SCGDYW 512
SC DYW
Sbjct: 601 SCRDYW 606
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/547 (41%), Positives = 324/547 (59%), Gaps = 36/547 (6%)
Query: 2 GFGFHPVLATKLVHL-YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
G G L TKL+ Y+A + +LF IP+ + FL++ LI + + ++
Sbjct: 46 GLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPKPDTFLFHSLITLTSKFSFPQESLLC 105
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
Y R+L + N+TF +K+ + L+A G IH V + D +V AAL+ YAK
Sbjct: 106 YRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLDAYVQAALVSFYAK 165
Query: 121 CSCVVNARQVFDKILER---------------------------------DPSEATLVTV 147
V+ AR+VFDK+ E+ P +T V++
Sbjct: 166 SGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSL 225
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+SA A + A+ G +H + R+ F+LNV + TAL++MY++CG V AR +F+ + EK +
Sbjct: 226 LSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAREVFDSMEEKNI 285
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V+W AMI+GY MHGH ++A++LF +M D +P+++TFV VLSAC+ GL DEGR F +
Sbjct: 286 VAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDEGRQIFTT 345
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK-PDPGVWGALLNSCKLHGHV 325
M ++Y + PSV+H CMVD+LG +G L+EA I K P P VW A+L +CK+H +
Sbjct: 346 MKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAMLGACKMHKNF 405
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
L E L+ +EP + G+YV+LSNIYA A + V K+R +MI +KK + S I+V
Sbjct: 406 DLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIMIRNRLKKEVGYSTIDV 465
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
+K + F GD SHP ++IY L L R +EAGY+P +ESV H+VE +E+ + HS
Sbjct: 466 DHKVYLFSMGDKSHPKTNQIYLYLDELMSRCREAGYIPASESVMHEVEEEEREYALRYHS 525
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
E+LAIAFGL+ T G + I KNL++C+DCH AIK+IS I REI VRD R+HHFKDG
Sbjct: 526 EKLAIAFGLLKTGSGVAIRIVKNLRMCEDCHTAIKYISIIANREINVRDRLRFHHFKDGS 585
Query: 506 CSCGDYW 512
CSC DYW
Sbjct: 586 CSCQDYW 592
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/540 (38%), Positives = 319/540 (59%), Gaps = 34/540 (6%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P + L+ +Y+ C + +A F+ IP ++ L + +I YA + E A EL+ RL+
Sbjct: 279 PHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMR 338
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
++P+ ++ L+AC+ + ++ G++IH I+ E+D+FVG AL+D YAKC+ + +
Sbjct: 339 SSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDS 398
Query: 127 ARQVFDKILERDP---------------------------------SEATLVTVISASAD 153
+ ++F + + + ++ T +V+ A A
Sbjct: 399 SLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACAS 458
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
A++ ++H + F + + +L+D YAKCG ++ A +F+ L E+ ++SWNA+
Sbjct: 459 TASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAI 518
Query: 214 ITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I+GYA+HG + AL+LF++M K V+ + ITFV +LS C GL + G F+SM D+
Sbjct: 519 ISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHG 578
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I PS++HYTC+V LLG +GRL++A I + P VW ALL+SC +H +V L +
Sbjct: 579 IKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSA 638
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
EK++E+EP D YV+LSN+YA A + + VA LRK M + G++K SW+E+K + HAF
Sbjct: 639 EKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAF 698
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
G HP+ I A L+WL + GY+P V HDV+ ++K M+ HSERLA+A+
Sbjct: 699 SVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAY 758
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
GL+ TP G + I KNL+ C DCH A ISKI +REI VRD+NR+HHF+DG CSCGDYW
Sbjct: 759 GLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 818
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 136/278 (48%), Gaps = 15/278 (5%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
A L+++Y L +A +LFDR+P+RN+ + L++A+A G +E A L+ RL G
Sbjct: 99 ANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGH 158
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
+ F LK A+ A +H + + + FVG+ LID Y+ CS V +A
Sbjct: 159 EVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEH 218
Query: 130 VFDKILERDPSEAT-LVTVIS------------ASADIAALPQGRE-LHGFSWRHRFELN 175
VF+ I+ +D T +V+ S S + A+ R+ +HG + + +
Sbjct: 219 VFNGIVRKDAVVWTAMVSCYSENDCPENAFRCAQSCSLLAISCARQGIHGCAIKTLNDTE 278
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK-MK 234
V AL+DMYAKCG +K AR FE + V+ + MI+ YA + +A +LF + M+
Sbjct: 279 PHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMR 338
Query: 235 DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
V P+ + VL AC+ D G+ ++ H
Sbjct: 339 SSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGH 376
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 182/415 (43%), Gaps = 59/415 (14%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + + L+ YS C + +A +F+ I +++ +W ++ Y+ N
Sbjct: 191 LGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSEND-------- 242
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
P+N F A ++CS L+ + IH I+ +T+ VG AL+DMYAK
Sbjct: 243 ---------CPEN-AFRCA-QSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAK 291
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + +AR F+ I D P+E +L +V
Sbjct: 292 CGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSV 351
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A ++ L G+++H + + E ++ V AL+D YAKC + + +F LR+
Sbjct: 352 LQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANE 411
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSAC-SRGGLFDEGRMFFE 265
VSWN ++ G++ G +AL +F +M+ P +T+ VL AC S + G++
Sbjct: 412 VSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCS 471
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
++ D + + ++D G + +A + Q ++ D W A+++ LHG
Sbjct: 472 IEKSTFNNDTVIGN--SLIDTYAKCGYIRDALK-VFQHLMERDIISWNAIISGYALHGQA 528
Query: 326 KLAELALEKL--IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
A +++ +E +D +LS + G++ + ID GIK S+
Sbjct: 529 ADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSM 583
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 49/210 (23%)
Query: 54 YEVAIE-LYYRLLEIGLVP-----DNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--E 105
Y A++ L L + ++P D+F L+ C A GR +H V+R
Sbjct: 34 YAAALQWLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGR 93
Query: 106 TDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASA------------- 152
D+F L++MY K + +AR++FD++ ER+ + VT++ A A
Sbjct: 94 LDLFCANVLLNMYGKLGPLASARRLFDRMPERN--MVSFVTLVQAHAQRGDFEAAAALFR 151
Query: 153 ------------------------DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
D A L G +H +W+ + N V + L+D Y+
Sbjct: 152 RLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGG--VHSCAWKLGHDHNAFVGSGLIDAYSL 209
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYA 218
C LV A ++F + K V W AM++ Y+
Sbjct: 210 CSLVSDAEHVFNGIVRKDAVVWTAMVSCYS 239
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 103/256 (40%), Gaps = 68/256 (26%)
Query: 160 GRELHGFSWRHRF--ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
GR +HG R L++ L++MY K G + AR LF+++ E+ +VS+ ++ +
Sbjct: 78 GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137
Query: 218 AMHGHSTKALDLFEKMKDE----------------------------------VQPDHIT 243
A G A LF +++ E + DH
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNA 197
Query: 244 FV--GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMV------DLLGHSGRLDE 295
FV G++ A S L + F +VR D V +T MV D ++ R +
Sbjct: 198 FVGSGLIDAYSLCSLVSDAEHVFNGIVRK---DAVV--WTAMVSCYSENDCPENAFRCAQ 252
Query: 296 ACDLI-------------MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHD 342
+C L+ ++ +P V GALL+ G +K A LA E + P+D
Sbjct: 253 SCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMI----PYD 308
Query: 343 AGNYVILSNIYARAAN 358
+ ++LS + +R A
Sbjct: 309 --DVILLSFMISRYAQ 322
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/549 (38%), Positives = 331/549 (60%), Gaps = 38/549 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P + +L+ S C + A ++F N++L+ LI + +G Y AI+LY
Sbjct: 66 GHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLY 125
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+L ++PDN+ LKAC + A+ EGR +H ++ + ++ V ++++Y KC
Sbjct: 126 SRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKC 185
Query: 122 SCVVNARQVFDKILE----RD---------------------------------PSEATL 144
+ +AR+VF+++ E +D P+E T+
Sbjct: 186 GELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTI 245
Query: 145 VTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE 204
V V+SA + + AL GR +H + + ELN+ V AL++MY++CG + A+ +F+++++
Sbjct: 246 VCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKD 305
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMF 263
+ V+++N MI+G +M+G S +A++LF M ++P ++TFVGVL+ACS GGL D G
Sbjct: 306 RDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEI 365
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
F SM RDY ++P ++HY CMVDLLG GRL+EA DLI M++ PD + G LL++CK+H
Sbjct: 366 FHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHK 425
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
+++L E ++L + D+G YV+LS++YA + W+ A++R M + G++K CS I
Sbjct: 426 NLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSI 485
Query: 384 EVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICC 443
EV N+ H FL GD HP + IY KL+ L ++ GY P E V D+E+ EK +
Sbjct: 486 EVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAM 545
Query: 444 HSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKD 503
HSERLAI +GLI+T T + + KNL++C DCH AIK I+KIT R+I VRD NR+H+F++
Sbjct: 546 HSERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKLIAKITRRKIVVRDRNRFHYFEN 605
Query: 504 GICSCGDYW 512
G CSCGDYW
Sbjct: 606 GACSCGDYW 614
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 148/330 (44%), Gaps = 18/330 (5%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQ----RNLFLWNVLIRAYAWNGPYEV 56
+GF + ++ +++ LY C L +A ++F+ +P+ ++ W +I + N
Sbjct: 166 LGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNR 225
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
A+E + + + P+ FT L ACS L A+E GR +H + + + E ++FVG ALI+
Sbjct: 226 ALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALIN 285
Query: 117 MYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
MY++C + A+ VFD++ +RD T T+IS + Q EL R
Sbjct: 286 MYSRCGSIDEAQTVFDEMKDRDV--ITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTN 343
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLR-----EKRVVSWNAMITGYAMHGHSTKALDLFE 231
+++ + GLV +F + E ++ + M+ G +A DL
Sbjct: 344 VTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIR 403
Query: 232 KMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
MK + PDHI +LSAC + G + + D Y + + SG
Sbjct: 404 TMK--MTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGT--YVLLSHVYASSG 459
Query: 292 RLDEACDLIMQMR---VKPDPGVWGALLNS 318
+ EA + +M+ ++ +PG +N+
Sbjct: 460 KWKEAAQVRAKMKEAGMQKEPGCSSIEVNN 489
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/534 (38%), Positives = 321/534 (60%), Gaps = 34/534 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ +Y+ C + +A F+ + ++ LW+++I YA E A EL+ R++ + P+
Sbjct: 673 LLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPN 732
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
F+ L+AC+ + ++ G++IH I+ E+++FVG ALID+YAKCS + ++ ++F
Sbjct: 733 EFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFS 792
Query: 133 KILERD--------------------------------PS-EATLVTVISASADIAALPQ 159
+ + + PS + T +V+ A A A++
Sbjct: 793 SLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINH 852
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
++H + F + V +L+D YAKCG ++ AR +FE L+E +VSWNA+I+GYA+
Sbjct: 853 VGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAV 912
Query: 220 HGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
HG + A +LF+ M K+ ++ + ITFV +LS C GL +G F+SM D+ I+PS++
Sbjct: 913 HGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSME 972
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
HYTC+V LLG +GRL++A + I + P VW ALL+SC +H +V+L + EK++E+
Sbjct: 973 HYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEI 1032
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDAS 398
EP D YV+LSN+Y+ A + + VA RK M + G++K SW+E+K + HAF G
Sbjct: 1033 EPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSED 1092
Query: 399 HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTP 458
HP I A L+WL + GYVP T+ V HD+E ++K M+ HSERLA+A+GL+ TP
Sbjct: 1093 HPCMRVINAMLEWLNLKAIREGYVPDTDEVLHDLEEEQKVRMLWVHSERLALAYGLVMTP 1152
Query: 459 DGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
G + I KNL+ C DCH K ISKI ++EI VRD+NR+HHF++G CSCGDYW
Sbjct: 1153 PGHPIRIMKNLRSCLDCHAIFKVISKIVKQEIIVRDINRFHHFEEGTCSCGDYW 1206
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 190/424 (44%), Gaps = 58/424 (13%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + + L+ YS C + +A ++FD I ++ W ++ Y+ N E +++
Sbjct: 560 LGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQI 619
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ + F L+A LS++ G+ IH ++ ++T+ V AL+DMYAK
Sbjct: 620 FSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAK 679
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + +AR F+ + D P+E +L +V
Sbjct: 680 CGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSV 739
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A A++ L G+++H + + E + V AL+D+YAKC ++ + +F LR+
Sbjct: 740 LQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNE 799
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDEVQPD-HITFVGVLSACSRGG----------L 256
VSWN +I GY+ G AL +F +M+ P +T+ VL AC+ L
Sbjct: 800 VSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCL 859
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
++ +++V + ID S C+ D L E CDL+ W A++
Sbjct: 860 IEKSTFNSDTIVSNSLID-SYAKCGCIRDAREIFETLKE-CDLVS----------WNAII 907
Query: 317 NSCKLHGHVKLAELALEKLIE--LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
+ +HG +A+ + + + ++ +D +LS + +G++ + +D GI
Sbjct: 908 SGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGI 967
Query: 375 KKSI 378
+ S+
Sbjct: 968 EPSM 971
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 155/329 (47%), Gaps = 35/329 (10%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
A L+++Y+ +AH++FD +P+RN+ + L++ +A G +E A L+ RL G
Sbjct: 468 ANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGH 527
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
+ F LK A+ + +H + + + FVG+ALID Y+ C V +AR+
Sbjct: 528 EVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARR 587
Query: 130 VFDKIL---------------ERDPSEAT------------------LVTVISASADIAA 156
VFD I+ E D E T L +V+ A+ +++
Sbjct: 588 VFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSS 647
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
+ G+ +H S + ++ V AL+DMYAKCG ++ AR FE + V+ W+ MI+
Sbjct: 648 VVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISR 707
Query: 217 YAMHGHSTKALDLFEK-MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
YA + +A +LF + M+ V P+ + VL AC+ L D G+ ++ H +
Sbjct: 708 YAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGH-ES 766
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
+ ++DL ++ + ++ +R
Sbjct: 767 ELFVGNALIDLYAKCSDMESSLEIFSSLR 795
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 137/328 (41%), Gaps = 50/328 (15%)
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYAKCSCVVNARQ 129
D++ + L+ C A GR +H V+R+ D+F L++MY K +A +
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486
Query: 130 VFDKILERDPSEATLVTVISASA------DIAALPQ-----GRELHGFSWRHRFEL---- 174
VFD + ER+ + VT++ A + +AL Q G E++ F +L
Sbjct: 487 VFDGLPERN--MVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAM 544
Query: 175 --------------------NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
N V +AL+D Y+ CG+V AR +F+ + K V+W AM+
Sbjct: 545 DTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMV 604
Query: 215 TGYAMHGHSTKALDLFEKMK---DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
+ Y+ + L +F KM+ ++ P +T V + C + +G V+
Sbjct: 605 SCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKG--IHACSVKTL 662
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
+ D Y ++D+ G +++A L +M D +W +++ + E A
Sbjct: 663 Y-DTERHVYGALLDMYAKCGNIEDA-RLAFEMVTNDDVILWSLMISR---YAQCNQNEQA 717
Query: 332 LEKLIE-LEPHDAGNYVILSNIYARAAN 358
E I + + N LS++ AN
Sbjct: 718 FELFIRMMRSSVSPNEFSLSSVLQACAN 745
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/540 (39%), Positives = 318/540 (58%), Gaps = 35/540 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL-LE 66
V+ T L+ +Y+ C CL A ++FD + RN W+ +I Y + + A+EL+ ++ L+
Sbjct: 246 VVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILK 305
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
+ P T L+AC+ L+ + GR++H +I+ D+ +G L+ MYAKC + +
Sbjct: 306 DAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDD 365
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISASAD 153
A + FD++ +D P T++ V+ A +
Sbjct: 366 AIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSH 425
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+AAL G HG+ F + + AL+DMY+KCG + AR +F ++ +VSWNAM
Sbjct: 426 LAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAM 485
Query: 214 ITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I GY +HG +AL LF + + ++PD ITF+ +LS+CS GL EGR++F++M RD+
Sbjct: 486 IIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFS 545
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I P ++H CMVD+LG +G +DEA I M +PD +W ALL++C++H +++L E
Sbjct: 546 IVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVS 605
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
+K+ L P GN+V+LSNIY+ A W+ A +R D G+KK CSWIE+ HAF
Sbjct: 606 KKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAF 665
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
+ GD SH +I KL+ L MK GY VF DVE +EK ++ HSE+LAIAF
Sbjct: 666 VGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAF 725
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
G++N G +L+TKNL++C DCH AIKF++ IT+REITVRD NR+HHFK+G C+CGD+W
Sbjct: 726 GILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 196/366 (53%), Gaps = 38/366 (10%)
Query: 12 KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
KL LY +C+ + A +LFD IP ++ LWN +IRAYAWNGP++ AI+LY+ +L +G+ P
Sbjct: 48 KLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRP 107
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
+ +T+PF LKACS L AIE+G IH E+DVFV AL+D YAKC +V A+++F
Sbjct: 108 NKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLF 167
Query: 132 DKILERD---------------------------------PSEATLVTVISASADIAALP 158
+ RD P+ +T+V V+ + AL
Sbjct: 168 SSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALG 227
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
G+ LHG+ R F+ V V T L+DMYAKC + AR +F+ + + VSW+AMI GY
Sbjct: 228 HGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYV 287
Query: 219 MHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
+AL+LF++M KD + P +T VL AC++ GR +++ +
Sbjct: 288 ASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDI 347
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
+ T ++ + G +D+A +M K D + A+++ C +G+ +A L++ +++
Sbjct: 348 LLGNT-LLSMYAKCGVIDDAIRFFDEMNPK-DSVSFSAIVSGCVQNGNAAVA-LSIFRMM 404
Query: 337 ELEPHD 342
+L D
Sbjct: 405 QLSGID 410
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 184/400 (46%), Gaps = 59/400 (14%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T LV Y+ C L A +LF + R++ WN +I + G + A++L ++ E G
Sbjct: 146 VCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEG 205
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P++ T L A+ G+ +H +R ++ V VG L+DMYAKC C++ AR
Sbjct: 206 ICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYAR 265
Query: 129 QVFDKILER----------------------------------DPSEATLVTVISASADI 154
++FD + R DP+ TL +V+ A A +
Sbjct: 266 KIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKL 325
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L +GR+LH + + L++ + L+ MYAKCG++ A F+++ K VS++A++
Sbjct: 326 TDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIV 385
Query: 215 TGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFES----MVR 269
+G +G++ AL +F M+ + PD T +GVL ACS G F S +VR
Sbjct: 386 SGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHG---FCSHGYLIVR 442
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+ D + ++D+ G++ A ++ +M + D W A++ +HG
Sbjct: 443 GFATDTLI--CNALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAMIIGYGIHG------ 493
Query: 330 LALEKL--------IELEPHDAGNYVILSNIYARAANWEG 361
L +E L + L+P D +LS+ EG
Sbjct: 494 LGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEG 533
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 142/323 (43%), Gaps = 37/323 (11%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI----- 134
L+AC ++ E ++IH+ ++N D V L +Y C+ VV AR++FD+I
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74
Query: 135 ----------------------------LERDPSEATLVTVISASADIAALPQGRELHGF 166
L P++ T V+ A + + A+ G E+H
Sbjct: 75 ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSH 134
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ E +V V TALVD YAKCG++ A+ LF + + VV+WNAMI G +++G A
Sbjct: 135 AKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDA 194
Query: 227 LDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
+ L +M++E + P+ T VGVL G+ VR D V T ++D
Sbjct: 195 VQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVR-RSFDNGVVVGTGLLD 253
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGN 345
+ L A + M V+ + W A++ +K A +++I + D
Sbjct: 254 MYAKCQCLLYARKIFDVMGVRNEVS-WSAMIGGYVASDCMKEALELFDQMILKDAMDP-T 311
Query: 346 YVILSNIYARAANWEGVAKLRKL 368
V L ++ A +++ RKL
Sbjct: 312 PVTLGSVLRACAKLTDLSRGRKL 334
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 6/194 (3%)
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ A +L + +++H ++ + V L +Y C V +AR LF+++
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V+ WN +I YA +G A+DL+ M V+P+ T+ VL ACS G L E +
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS-GLLAIEDGVEIH 132
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
S + + ++ V T +VD G L EA L M + D W A++ C L+G
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSLYG-- 189
Query: 326 KLAELALEKLIELE 339
L + A++ +++++
Sbjct: 190 -LCDDAVQLIMQMQ 202
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF ++ L+ +YS C + A ++F+R+ + ++ WN +I Y +G A+ L+
Sbjct: 443 GFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLF 502
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
+ LL +GL PD+ TF L +CS + EGR
Sbjct: 503 HDLLALGLKPDDITFICLLSSCSHSGLVMEGR 534
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/547 (39%), Positives = 326/547 (59%), Gaps = 40/547 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRI-PQRNLFLWNVLIRAYAWNGPYEVAIEL 60
G + + T L+ + C + +A LF + +++ W +I Y NG + A+ L
Sbjct: 334 GLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNL 393
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + G+ P++FT+ L A+ E IH +VI+ +E VG AL+D + K
Sbjct: 394 FSLMRREGVKPNHFTYSTILTVQHAVFISE----IHAEVIKTNYEKSSSVGTALLDAFVK 449
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ +A +VF+ I +D P+E T ++
Sbjct: 450 IGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSI 509
Query: 148 ISA-SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
I+A +A A++ QG++ H ++ + R + V ++LV +YAK G ++ A +F++ +E+
Sbjct: 510 INACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERD 569
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+VSWN+MI+GYA HG + KAL++FE+M K ++ D ITF+GV+SAC+ GL +G+ +F
Sbjct: 570 LVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFN 629
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
M+ D+HI+P+++HY+CM+DL +G L +A D+I M P VW +L + ++H ++
Sbjct: 630 IMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNI 689
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+L +LA EK+I LEP + YV+LSNIYA A NW +RKLM R +KK SWIEV
Sbjct: 690 ELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEV 749
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
KNK ++FL+GD SHP D IY+KL L R+++ GY P T VFHD+E+++K ++ HS
Sbjct: 750 KNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHS 809
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
ERLAIAFGLI T L I KNL++C DCH IK +S + +R I VRD NR+HHFK G+
Sbjct: 810 ERLAIAFGLIATLPEIPLQIVKNLRVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGL 869
Query: 506 CSCGDYW 512
CSCGDYW
Sbjct: 870 CSCGDYW 876
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 153/359 (42%), Gaps = 68/359 (18%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A QLFD+ P R+L N L+ Y+ + A+ L+ L GL PD++T L C+
Sbjct: 55 AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
G ++H ++ + VG +L+DMY K V + R+VFD++ +RD
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSL 174
Query: 139 --------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
P T+ TVI+A A+ A+ G ++H + F
Sbjct: 175 LTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGF 234
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
E V +L+ M +K G+++ AR +F+ + K VSWN+MI G+ ++G +A + F
Sbjct: 235 ETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNN 294
Query: 233 MK-DEVQPDHITFVGVLSACS----------------RGGLFDEGRMFFESMV------- 268
M+ +P H TF V+ +C+ + GL + MV
Sbjct: 295 MQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKE 354
Query: 269 --------RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWGALL 316
H SV +T M+ +G D+A +L MR VKP+ + +L
Sbjct: 355 IDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTIL 413
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 41/350 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G H + LV +Y+ + + ++FD + R++ WN L+ Y+WN + EL+
Sbjct: 132 GLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELF 191
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G PD +T + A + A+ G +IH V++ +ET+ V +LI M +K
Sbjct: 192 CLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKS 251
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +AR VFD + +D P+ AT +VI
Sbjct: 252 GMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVI 311
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE-KRV 207
+ A + L R LH + + N V TAL+ KC + A +LF + + V
Sbjct: 312 KSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSV 371
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSW AMI+GY +G + +A++LF M+ E V+P+H T+ +L+ + +F + E
Sbjct: 372 VSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTV--QHAVFI-SEIHAEV 428
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
+ +Y SV T ++D G + +A + + K D W A+L
Sbjct: 429 IKTNYEKSSSVG--TALLDAFVKIGNISDAVKVFELIETK-DVIAWSAML 475
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 165/371 (44%), Gaps = 42/371 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF ++ L+ + S L +A +FD + ++ WN +I + NG A E
Sbjct: 232 LGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFET 291
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + G P + TF +K+C++L + R +H +++ T+ V AL+ K
Sbjct: 292 FNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTK 351
Query: 121 CSCVVNARQVFD-------------------------------KILERD---PSEATLVT 146
C + +A +F ++ R+ P+ T T
Sbjct: 352 CKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYST 411
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+++ + E+H + +E + V TAL+D + K G + A +FE + K
Sbjct: 412 ILTVQHAVFI----SEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKD 467
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSR-GGLFDEGRMFF 264
V++W+AM+ GYA G + +A +F ++ E ++P+ TF +++AC+ ++G+ F
Sbjct: 468 VIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFH 527
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
++ ++ ++ + +V L G ++ A ++ + + + D W ++++ HG
Sbjct: 528 AYAIK-LRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKER-DLVSWNSMISGYAQHGQ 585
Query: 325 VKLAELALEKL 335
K A E++
Sbjct: 586 AKKALEVFEEM 596
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/527 (39%), Positives = 311/527 (59%), Gaps = 34/527 (6%)
Query: 20 CDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFA 79
C + A +F+ + R+ W ++ NG A++++ R+ G+ D +TF
Sbjct: 228 CKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSI 287
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
L AC AL+A EEG++IH IR ++ ++FVG+AL+DMY+KC + A VF ++ ++
Sbjct: 288 LTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNI 347
Query: 139 --------------------------------PSEATLVTVISASADIAALPQGRELHGF 166
P++ TL +VIS+ A++A+L +G + H
Sbjct: 348 ISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCM 407
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ + V +ALV +Y KCG ++ A LF+++ VS+ A+++GYA G + +
Sbjct: 408 ALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKET 467
Query: 227 LDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
+DLFEKM V+P+ +TF+GVLSACSR GL ++G +F SM +D+ I HYTCM+D
Sbjct: 468 IDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMID 527
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGN 345
L SGRL EA + I QM PD W LL++C+L G +++ + A E L++ +P + +
Sbjct: 528 LYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIGKWAAENLLKTDPQNPAS 587
Query: 346 YVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEI 405
YV+L +++A W VA LR+ M DR +KK CSWI+ KN+ H F + D SHP I
Sbjct: 588 YVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIKYKNRVHIFSADDQSHPFSGTI 647
Query: 406 YAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLI 465
Y KL+WL +M E GY P SV HDV + EK +M+ HSE+LAIAFGLI P+ + +
Sbjct: 648 YEKLQWLNSKMAEEGYKPDVSSVLHDVADAEKVHMLSNHSEKLAIAFGLIFVPEEMPIRV 707
Query: 466 TKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
KNL++C DCH A KFISKIT R+I VRD R+H F +GICSCGD+W
Sbjct: 708 VKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 754
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/471 (24%), Positives = 199/471 (42%), Gaps = 98/471 (20%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV-------PDNFT 75
L + +LF +PQR+ +N LI ++ G A Y LL V P T
Sbjct: 92 LPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRIT 151
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK--------------- 120
+ A SAL GR++H ++R + F + L+DMYAK
Sbjct: 152 MSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMV 211
Query: 121 ----------------CSCVVNARQVFDKILERDP----------------SEA------ 142
C V AR VF+ +++RD SEA
Sbjct: 212 VKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRR 271
Query: 143 -----------TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGL 191
T ++++A +AA +G+++H ++ R ++ N+ V +ALVDMY+KC
Sbjct: 272 MRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRS 331
Query: 192 VKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSA 250
+++A +F ++ K ++SW AMI GY +G +A+ +F +M+ D ++P+ T V+S+
Sbjct: 332 IRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISS 391
Query: 251 CSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPG 310
C+ +EG F M + P + + +V L G G +++A L +M D
Sbjct: 392 CANLASLEEGAQ-FHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFH-DQV 449
Query: 311 VWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGV--AKLRKL 368
+ AL++ G K E D ++L + + GV A R
Sbjct: 450 SYTALVSGYAQFGKAK------------ETIDLFEKMLLKGVKPNGVTFIGVLSACSRSG 497
Query: 369 MIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEA 419
++++G CS+ + H + D + ++Y++ GR+KEA
Sbjct: 498 LVEKG------CSYFHSMQQDHGIVLLDDHYTCMIDLYSR----SGRLKEA 538
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 141/310 (45%), Gaps = 14/310 (4%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ + LV +YS C + A +F R+ +N+ W +I Y NG E A+ ++ + G
Sbjct: 318 VGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDG 377
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P++FT + +C+ L+++EEG + H + + + V +AL+ +Y KC + +A
Sbjct: 378 IKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAH 437
Query: 129 QVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
++FD++ D + + ++S A + +L + N ++ ++
Sbjct: 438 RLFDEMPFHD--QVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSR 495
Query: 189 CGLVKVARNLFEQLREKRVV-----SWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHIT 243
GLV+ + F +++ + + MI Y+ G +A + +M PD I
Sbjct: 496 SGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPR--CPDAIG 553
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
+ +LSAC G + G+ E++++ +P+ Y + + G E L M
Sbjct: 554 WATLLSACRLRGDMEIGKWAAENLLKTDPQNPA--SYVLLCSMHASKGEWSEVALLRRGM 611
Query: 304 R---VKPDPG 310
R VK +PG
Sbjct: 612 RDRQVKKEPG 621
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/536 (38%), Positives = 314/536 (58%), Gaps = 35/536 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
+ L+HLY+ + +A ++F R+P+R+ W+ ++ + G AI++Y R+ E G+
Sbjct: 147 SSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVK 206
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
D ++AC+A + G +H ++R+ DV +L+DMYAK + A +V
Sbjct: 207 GDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRV 266
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F ++ R+ P LV+ + A ++I L
Sbjct: 267 FGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFL 326
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
GR +HGF R RF+ N + TA +DMY+KCG + A+ LF + ++ ++ WNAMI
Sbjct: 327 KLGRSVHGFIVR-RFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACC 385
Query: 218 AMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
HG AL LF++M + ++PDH TF +LSA S GL +EG+++F MV + I P+
Sbjct: 386 GAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPA 445
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
+HY C+VDLL SG ++EA DL+ M+ +P +W ALL+ C + ++L E + ++
Sbjct: 446 EKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNIL 505
Query: 337 ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGD 396
EL+P D G ++SN+YA W+ V ++RKLM D G KK CS IE++ H F+ D
Sbjct: 506 ELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMED 565
Query: 397 ASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLIN 456
SHP +EI +K+ L+ M++ GY+P TE V+HD+E + K + HSERLAIAFGL+N
Sbjct: 566 QSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLN 625
Query: 457 TPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
T GTRL+I KNL++C DCH AIK+ISKI +REI VRD R+HHFKDG+CSC DYW
Sbjct: 626 TGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 147/327 (44%), Gaps = 39/327 (11%)
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+R L PD+ TF AL AC+ L + G + + ++ DVFV ++L+ +YA+
Sbjct: 97 FRALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARW 156
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +A +VF ++ RD E ++ VI
Sbjct: 157 GAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVI 216
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A + G +HG RH ++V T+LVDMYAK GL+ VA +F + + V
Sbjct: 217 QACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDV 276
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SW+AMI+G+A +G S +AL LF M+ +QPD V L ACS G GR +
Sbjct: 277 SWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFI 336
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
VR + + + T +D+ G L A ++ M D +W A++ C HG +
Sbjct: 337 VRRFDFNCILG--TAAIDMYSKCGSLASA-QMLFNMISDRDLILWNAMIACCGAHGRGQD 393
Query: 328 AELALEKLIE--LEPHDAGNYVILSNI 352
A +++ E + P A +LS +
Sbjct: 394 ALTLFQEMNETGMRPDHATFASLLSAL 420
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 136/287 (47%), Gaps = 45/287 (15%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G V AT LV +Y+ L A ++F + RN W+ +I +A NG + A+ L+
Sbjct: 239 GMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLF 298
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ PD+ AL ACS + ++ GR +H ++R +++ + +G A IDMY+KC
Sbjct: 299 RNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR-RFDFNCILGTAAIDMYSKC 357
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +A+ +F+ I +RD P AT +++
Sbjct: 358 GSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLL 417
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVK--TALVDMYAKCGLVKVARNLFEQLR-EK 205
SA + + +G+ G H F++ K LVD+ A+ GLV+ A +L ++ E
Sbjct: 418 SALSHSGLVEEGKLWFGRMVNH-FKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEP 476
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKD---EVQPDHITFVGVLS 249
V W A+++G + K L+L E + D E+QPD + + ++S
Sbjct: 477 TVAIWVALLSGCL----NNKKLELGESIADNILELQPDDVGVLALVS 519
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/540 (39%), Positives = 317/540 (58%), Gaps = 35/540 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL-LE 66
V+ T L+ +Y+ C CL A ++FD + RN W+ +I Y + + A+EL+ ++ L+
Sbjct: 246 VVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILK 305
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
+ P T L+AC+ L+ + GR++H +I+ D+ +G L+ MYAKC + +
Sbjct: 306 DAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDD 365
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISASAD 153
A + FD + +D P T++ V+ A +
Sbjct: 366 AIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSH 425
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+AAL G HG+ F + + AL+DMY+KCG + AR +F ++ +VSWNAM
Sbjct: 426 LAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAM 485
Query: 214 ITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I GY +HG +AL LF + + ++PD ITF+ +LS+CS GL EGR++F++M RD+
Sbjct: 486 IIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFS 545
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I P ++H CMVD+LG +G +DEA I M +PD +W ALL++C++H +++L E
Sbjct: 546 IVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVS 605
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
+K+ L P GN+V+LSNIY+ A W+ A +R D G+KK CSWIE+ HAF
Sbjct: 606 KKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAF 665
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
+ GD SH +I KL+ L MK GY VF DVE +EK ++ HSE+LAIAF
Sbjct: 666 VGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAF 725
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
G++N G +L+TKNL++C DCH AIKF++ IT+REITVRD NR+HHFK+G C+CGD+W
Sbjct: 726 GILNLKAGRPILVTKNLRVCGDCHAAIKFMTVITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 195/366 (53%), Gaps = 38/366 (10%)
Query: 12 KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
KL LY +C+ + A +LFD IP ++ LWN +IRAYAWNGP++ AI+LY+ +L +G+ P
Sbjct: 48 KLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRP 107
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
+ +T+PF LKACS L AIE+G IH E+DVFV AL+D YAKC +V A+++F
Sbjct: 108 NKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLF 167
Query: 132 DKILERD---------------------------------PSEATLVTVISASADIAALP 158
+ RD P+ +T+V V+ + AL
Sbjct: 168 SSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALG 227
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
G+ LHG+ R F+ V V T L+DMYAKC + AR +F+ + + VSW+AMI GY
Sbjct: 228 HGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYV 287
Query: 219 MHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
+AL+LF++M KD + P +T VL AC++ GR +++ +
Sbjct: 288 XSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDI 347
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
+ T ++ + G +D+A M K D + A+++ C +G+ +A L++ +++
Sbjct: 348 LLGNT-LLSMYAKCGVIDDAIRFFDXMNPK-DSVSFSAIVSGCVQNGNAAVA-LSIFRMM 404
Query: 337 ELEPHD 342
+L D
Sbjct: 405 QLSGID 410
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 183/400 (45%), Gaps = 59/400 (14%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T LV Y+ C L A +LF + R++ WN +I + G + A++L ++ E G
Sbjct: 146 VCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEG 205
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P++ T L A+ G+ +H +R ++ V VG L+DMYAKC C++ AR
Sbjct: 206 ICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYAR 265
Query: 129 QVFDKILER----------------------------------DPSEATLVTVISASADI 154
++FD + R DP+ TL +V+ A A +
Sbjct: 266 KIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKL 325
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L +GR+LH + + L++ + L+ MYAKCG++ A F+ + K VS++A++
Sbjct: 326 TDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIV 385
Query: 215 TGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFES----MVR 269
+G +G++ AL +F M+ + PD T +GVL ACS G F S +VR
Sbjct: 386 SGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHG---FCSHGYLIVR 442
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+ D + ++D+ G++ A ++ +M + D W A++ +HG
Sbjct: 443 GFATDTLI--CNALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAMIIGYGIHG------ 493
Query: 330 LALEKL--------IELEPHDAGNYVILSNIYARAANWEG 361
L +E L + L+P D +LS+ EG
Sbjct: 494 LGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEG 533
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 142/323 (43%), Gaps = 37/323 (11%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI----- 134
L+AC ++ E ++IH+ ++N D V L +Y C+ VV AR++FD+I
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74
Query: 135 ----------------------------LERDPSEATLVTVISASADIAALPQGRELHGF 166
L P++ T V+ A + + A+ G E+H
Sbjct: 75 ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSH 134
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ E +V V TALVD YAKCG++ A+ LF + + VV+WNAMI G +++G A
Sbjct: 135 AKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDA 194
Query: 227 LDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
+ L +M++E + P+ T VGVL G+ VR D V T ++D
Sbjct: 195 VQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVR-RSFDNGVVVGTGLLD 253
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGN 345
+ L A + M V+ + W A++ +K A +++I + D
Sbjct: 254 MYAKCQCLLYARKIFDVMGVRNEVS-WSAMIGGYVXSDCMKEALELFDQMILKDAMDP-T 311
Query: 346 YVILSNIYARAANWEGVAKLRKL 368
V L ++ A +++ RKL
Sbjct: 312 PVTLGSVLRACAKLTDLSRGRKL 334
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 6/194 (3%)
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ A +L + +++H ++ + V L +Y C V +AR LF+++
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V+ WN +I YA +G A+DL+ M V+P+ T+ VL ACS G L E +
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS-GLLAIEDGVEIH 132
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
S + + ++ V T +VD G L EA L M + D W A++ C L+G
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSLYG-- 189
Query: 326 KLAELALEKLIELE 339
L + A++ +++++
Sbjct: 190 -LCDDAVQLIMQMQ 202
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF ++ L+ +YS C + A ++F+R+ + ++ WN +I Y +G A+ L+
Sbjct: 443 GFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLF 502
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
+ LL +GL PD+ TF L +CS + EGR
Sbjct: 503 HDLLALGLKPDDITFICLLSSCSHSGLVMEGR 534
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/539 (40%), Positives = 314/539 (58%), Gaps = 52/539 (9%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
++ Y+ + A QLFD P +++F W ++ Y N E A EL+ ++ E V
Sbjct: 256 IITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSW 315
Query: 73 NFTFPFALKACSALSAIEEGRRIHE-----DVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
N + L+ +G R+ DV+ + +V +I YA+C + A
Sbjct: 316 N----------AMLAGYVQGERMEMAKELFDVMPCR---NVSTWNTMITGYAQCGKISEA 362
Query: 128 RQVFDKILERDP---------------------------------SEATLVTVISASADI 154
+ +FDK+ +RDP + ++ + +S AD+
Sbjct: 363 KNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADV 422
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
AL G++LHG + +E V AL+ MY KCG ++ A +LF+++ K +VSWN MI
Sbjct: 423 VALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMI 482
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
GY+ HG AL FE MK E ++PD T V VLSACS GL D+GR +F +M +DY +
Sbjct: 483 AGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGV 542
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P+ QHY CMVDLLG +G L++A +L+ M +PD +WG LL + ++HG+ +LAE A +
Sbjct: 543 MPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAAD 602
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
K+ +EP ++G YV+LSN+YA + W V KLR M D+G+KK SWIE++NK H F
Sbjct: 603 KIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFS 662
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD HP DEI+A L+ L+ RMK+AGYV T V HDVE +EK M+ HSERLA+A+G
Sbjct: 663 VGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYG 722
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++ G + + KNL++C+DCH AIK++++IT R I +RD NR+HHFKDG CSCGDYW
Sbjct: 723 IMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 165/369 (44%), Gaps = 52/369 (14%)
Query: 17 YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTF 76
Y+ C+ +A +FDR+P++N WN L+ AY N E A L+ LV N
Sbjct: 167 YAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLL 226
Query: 77 PFALKACSALSAIEEGRRIHEDV-IRN--KWET------------------------DVF 109
+K I E R+ + + +R+ W T DVF
Sbjct: 227 GGFVKK----KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282
Query: 110 VGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWR 169
A++ Y + V AR++FDK+ ER+ +S +A +A QG + +
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPERNE--------VSWNAMLAGYVQGERME--MAK 332
Query: 170 HRFEL----NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
F++ NV ++ YA+CG + A+NLF+++ ++ VSW AMI GY+ GHS +
Sbjct: 333 ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFE 392
Query: 226 ALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCM 283
AL LF +M+ E + + +F LS C+ + G+ +V+ Y V + +
Sbjct: 393 ALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGN--AL 450
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPH 341
+ + G ++EA DL +M K D W ++ HG ++A E + L+P
Sbjct: 451 LLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPD 509
Query: 342 DAGNYVILS 350
DA +LS
Sbjct: 510 DATMVAVLS 518
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 148/328 (45%), Gaps = 46/328 (14%)
Query: 24 HNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKAC 83
+ A ++F R+P+ + +N +I Y NG +E+A +L+ + E LV N +K
Sbjct: 81 NEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVM----IKGY 136
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER-DPSEA 142
+ + R + E + E DV ++ YA+ CV +AR VFD++ E+ D S
Sbjct: 137 VRNRNLGKARELFEIMP----ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWN 192
Query: 143 TLVTVI---SASADIAALPQGRE----------LHGFSWRHRF--------ELNVK---V 178
L++ S + L + RE L GF + + +NV+
Sbjct: 193 ALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVS 252
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ 238
++ YA+ G + AR LF++ + V +W AM++GY + +A +LF+KM +
Sbjct: 253 WNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER-- 310
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP--SVQHYTCMVDLLGHSGRLDEA 296
+ +++ +L+ +G + + F+ M P +V + M+ G++ EA
Sbjct: 311 -NEVSWNAMLAGYVQGERMEMAKELFDVM-------PCRNVSTWNTMITGYAQCGKISEA 362
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+L +M K DP W A++ GH
Sbjct: 363 KNLFDKM-PKRDPVSWAAMIAGYSQSGH 389
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 14/147 (9%)
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP 239
++ Y + G ++AR LF+++ E+ +VSWN MI GY + + KA +LFE M +
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPER--- 155
Query: 240 DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
D ++ +LS ++ G D+ R F+ M + + ++ + +++EAC +
Sbjct: 156 DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVS-----WNALLSAYVQNSKMEEAC-M 209
Query: 300 IMQMRVKPDPGVWGALLNSCKLHGHVK 326
+ + R W + +C L G VK
Sbjct: 210 LFKSREN-----WALVSWNCLLGGFVK 231
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 9/144 (6%)
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
++K + Y + G A +F+++ VS+N MI+GY +G A LF++M
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 235 DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLD 294
+ D +++ ++ R + R FE M + V + M+ +G +D
Sbjct: 123 ER---DLVSWNVMIKGYVRNRNLGKARELFEIMP-----ERDVCSWNTMLSGYAQNGCVD 174
Query: 295 EACDLIMQMRVKPDPGVWGALLNS 318
+A + +M K D W ALL++
Sbjct: 175 DARSVFDRMPEKNDVS-WNALLSA 197
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/576 (37%), Positives = 324/576 (56%), Gaps = 65/576 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G ++ + T LV +Y C L A +FD P+ ++ WN++I AY G +E + L+
Sbjct: 169 GLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLF 228
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + ++P T L ACS L + G+++H V K E+++ + A+IDMYA C
Sbjct: 229 LVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADC 288
Query: 122 ---------------------SCVVN----------ARQVFDKILERD------------ 138
+ +V+ AR FDK+ E+D
Sbjct: 289 GEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYI 348
Query: 139 ---------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
P E T+V+V++A A + AL G + + R++ + ++
Sbjct: 349 RSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLF 408
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDE 236
V+ AL+DMY KCG V A ++F ++ ++ +W AMI G A++GH KALD+F M K
Sbjct: 409 VRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKAS 468
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+ PD IT++GVLSAC+ GL D+GR +F M + I+P++ HY C+VDLL +GRL EA
Sbjct: 469 ILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEA 528
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARA 356
++I M +K + VWGALL C+++ +AE+ +++++ELEP + YV+L NIYA
Sbjct: 529 YEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAAC 588
Query: 357 ANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRM 416
W + +LR++M+D+GIKK CS IE+ + H F++GD SHP I AKL + +
Sbjct: 589 KRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDL 648
Query: 417 KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCH 476
K AGY P VF D+ ++K N + HSE+LAIAFGLIN+P G + ITKNL++C DCH
Sbjct: 649 KLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCH 708
Query: 477 IAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
K +SK+ RE+ VRD R+HHFK G+CSC DYW
Sbjct: 709 NMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 182/394 (46%), Gaps = 77/394 (19%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHN------AHQLFDRIPQRNLFLWNVLIRAYAWNGPYE 55
G +PVL +++ + C C H A +LFD IP+ NLF+WN +IR Y+ +
Sbjct: 66 GLNANPVLQNRVM---TFC-CTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQ 121
Query: 56 VAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALI 115
+ + LY +L G+ PD +TFPF K + A+E GR++H V+++ + +VFV AL+
Sbjct: 122 LGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALV 181
Query: 116 DMYAKCSCVVNARQVFDKILERD---------------------------------PSEA 142
MY C + AR VFD + D P+
Sbjct: 182 QMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTV 241
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC------------- 189
TLV V+SA + + L G+++H + + E N+ ++ A++DMYA C
Sbjct: 242 TLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSM 301
Query: 190 ------------------GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
G + VARN F+++ EK VSW AMI GY +AL+LF
Sbjct: 302 NNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFR 361
Query: 232 KMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
M+ V+PD T V VL+AC+ G + G + + + I + ++D+
Sbjct: 362 NMQATNVKPDEFTMVSVLTACAHLGALELGE-WIRTYIDRNKIKNDLFVRNALIDMYFKC 420
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
G +D+A + +M + D W A++ ++GH
Sbjct: 421 GDVDKAESIFREMSQR-DKFTWTAMIVGLAVNGH 453
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/548 (38%), Positives = 322/548 (58%), Gaps = 37/548 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQR---NLFLWNVLIRAYAWNGPYEVAI 58
G H + + LVH+YS C + A Q+ D +P ++F +N ++ A +G E A+
Sbjct: 147 GLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAV 206
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
E+ R+++ + D+ T+ + C+ + ++ G R+H ++R D FVG+ LIDMY
Sbjct: 207 EVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMY 266
Query: 119 AKCSCVVNARQVFDKILERD---------------------------------PSEATLV 145
KC V+NAR VFD + R+ P+E T
Sbjct: 267 GKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFA 326
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+++A A IAAL G LH + F+ +V V+ AL++MY+K G + + N+F + +
Sbjct: 327 VLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYR 386
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
+++WNAMI GY+ HG +AL +F+ M E P+++TF+GVLSA S GL EG +
Sbjct: 387 DIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYL 446
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
++R++ I+P ++HYTCMV LL +G LDEA + + +VK D W LLN+C +H +
Sbjct: 447 NHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRN 506
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
L E +++++PHD G Y +LSN+YA+A W+GV +RKLM +R IKK SW++
Sbjct: 507 YDLGRRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLD 566
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
++N H FLS ++HP +IY K++ L +K GYVP SV HDVE+++K + H
Sbjct: 567 IRNDIHVFLSEGSNHPESIQIYKKVQQLLALIKPLGYVPNIASVLHDVEDEQKEGYLSYH 626
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SE+LA+A+GL+ P + I KNL++CDDCH A+K ISK+T R I VRD NR+HHF+DG
Sbjct: 627 SEKLALAYGLMKIPSPAPIRIIKNLRMCDDCHTAVKLISKVTNRLIIVRDANRFHHFRDG 686
Query: 505 ICSCGDYW 512
C+C D+W
Sbjct: 687 SCTCLDHW 694
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 178/410 (43%), Gaps = 46/410 (11%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI-GL 69
LVHLY C L A LFD +P RN+ WNVL+ Y G + + L+ ++ +
Sbjct: 54 NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNA 113
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
P+ + F AL ACS ++EG + H + + +V +AL+ MY++CS V A Q
Sbjct: 114 CPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQ 173
Query: 130 VFD------------------------------KILERDPSE------ATLVTVISASAD 153
V D ++L R E T V V+ A
Sbjct: 174 VLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQ 233
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
I L G +H R + V + L+DMY KCG V ARN+F+ L+ + VV W A+
Sbjct: 234 IRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTAL 293
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
+T Y +G+ ++L+LF M E P+ TF +L+AC+ G + + V
Sbjct: 294 MTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDL-LHARVEKLG 352
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
V ++++ SG +D + ++ M + D W A++ HG K A
Sbjct: 353 FKNHVIVRNALINMYSKSGSIDSSYNVFTDM-IYRDIITWNAMICGYSHHGLGKQALQVF 411
Query: 333 EKLIELEPHDAGNYVILSNIYARAANW----EGVAKLRKLMIDRGIKKSI 378
+ ++ E + NYV + + ++ EG L LM + I+ +
Sbjct: 412 QDMVSAE--ECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGL 459
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 71/136 (52%), Gaps = 8/136 (5%)
Query: 130 VFDKILERDPSEATLVTVISASADIAALPQGRELHG-FSWRHRFELNVKVK--TALVDMY 186
VF + L PS L ++ AD+ LP G+ +H F R++ + + +LV +Y
Sbjct: 4 VFSRYL---PSLEELGKLLKLCADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLY 60
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK--DEVQPDHITF 244
KCG + +ARNLF+ + + VVSWN ++ GY G+ + L LF+ M P+ F
Sbjct: 61 VKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVF 120
Query: 245 VGVLSACSRGGLFDEG 260
LSACS GG EG
Sbjct: 121 TTALSACSHGGRVKEG 136
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 54/102 (52%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF H ++ L+++YS + +++ +F + R++ WN +I Y+ +G + A+++
Sbjct: 351 LGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQV 410
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN 102
+ ++ P+ TF L A S L ++EG ++RN
Sbjct: 411 FQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRN 452
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/545 (38%), Positives = 312/545 (57%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G ++T L+ +YS + A LF +L WN ++ + + Y A+ L+
Sbjct: 429 GIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLF 488
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ E G D TF A KA L +++G++IH VI+ ++ D+FV + ++DMY KC
Sbjct: 489 SLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKC 548
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +AR+VF++I D P E T T++
Sbjct: 549 GEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLV 608
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A + + AL QG+++H + + V T+LVDMYAKCG ++ A LF ++ + V
Sbjct: 609 KACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVA 668
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
WNAMI G A HG++ +AL+ F +MK V PD +TF+GVLSACS GL + F+SM
Sbjct: 669 LWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSM 728
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ Y ++P ++HY+C+VD L +G + EA ++ M + ++ LLN+C++ G +
Sbjct: 729 QKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKET 788
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E EKL ++P D+ YV+LSNIYA A WE R +M +KK SWI++KN
Sbjct: 789 GERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKN 848
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K H F++GD SH D IY K++++ R+KE GYVP TE D+E ++K + + HSE+
Sbjct: 849 KVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYHSEK 908
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIA+GL+ TP T L + KNL++C DCH AIK+IS + +REI +RD NR+HHF+ GICS
Sbjct: 909 LAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSGICS 968
Query: 508 CGDYW 512
CGDYW
Sbjct: 969 CGDYW 973
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 156/329 (47%), Gaps = 18/329 (5%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + +A LV++Y+ + A LFDR+P R++ LWNV+++AY G + + L
Sbjct: 151 IGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGL 210
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSA----IEEGRRIHEDVIRNKWETDVFVGAALID 116
+ GL PD + L + +E+ R + ++DV V +
Sbjct: 211 FSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLS 270
Query: 117 MYAKCSCVVNARQVF-DKILERDPSEA-TLVTVISASADIAALPQGRELHGFSWRHRFEL 174
Y + A F D I R P ++ T + ++S A + L G+++HG R ++
Sbjct: 271 SYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQ 330
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF-EKM 233
V V + ++MY K G V AR +F Q++E ++SWN +I+G A G +L LF + +
Sbjct: 331 FVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLL 390
Query: 234 KDEVQPDHITFVGVLSACSRGGLFDE----GRMFFESMVR-DYHIDPSVQHYTCMVDLLG 288
+ + PD T VL ACS +E GR ++ +D V T ++D+
Sbjct: 391 RSGLLPDQFTITSVLRACSS---LEESYCVGRQVHTCALKAGIVLDSFVS--TALIDVYS 445
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLN 317
G+++EA +L+ + D W A+++
Sbjct: 446 KGGKMEEA-ELLFHNQDGFDLASWNAMMH 473
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 150/334 (44%), Gaps = 39/334 (11%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +LF ++ +WN + +Y G A++ + +++ + D+ T+ L ++
Sbjct: 250 ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVAS 309
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
L+ +E G++IH V+R W+ V V + I+MY K V AR++F ++ E D
Sbjct: 310 LNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTV 369
Query: 139 --------------------------PSEATLVTVISASADIA-ALPQGRELHGFSWRHR 171
P + T+ +V+ A + + + GR++H + +
Sbjct: 370 ISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAG 429
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
L+ V TAL+D+Y+K G ++ A LF + SWNAM+ G+ + + +AL LF
Sbjct: 430 IVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFS 489
Query: 232 KMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGH 289
M + + D ITF A +G+ +++ +H D V + ++D+
Sbjct: 490 LMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFV--ISGILDMYLK 547
Query: 290 SGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
G + A + Q+ PD W +++ C +G
Sbjct: 548 CGEMKSARKVFNQIP-SPDDVAWTTVISGCVENG 580
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 159/357 (44%), Gaps = 32/357 (8%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQ--RNLFLWNVLIRAYAWNGP-YEV-- 56
G +P + L+ +Y+ C L +A +LFD PQ R+L +N ++ AYA G ++V
Sbjct: 43 GLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEK 102
Query: 57 ---AIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAA 113
A ++ L + ++ T K C + + ++ + DVFV A
Sbjct: 103 THEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGA 162
Query: 114 LIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHG-FSWRHRF 172
L+++YAK + AR +FD++ RD ++ A ++ A G E+ G FS HR
Sbjct: 163 LVNIYAKFQRIREARVLFDRMPVRDV--VLWNVMMKAYVEMGA---GDEVLGLFSAFHRS 217
Query: 173 ELN---VKVKTALVDMYAKCGLVK-------VARNLFEQLREKRVVSWNAMITGYAMHGH 222
L V V+T L+ + K + A LF + V WN ++ Y G
Sbjct: 218 GLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGE 277
Query: 223 STKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYT 281
+A+D F M K V D +T++ +LS + + G+ ++VR + D V
Sbjct: 278 GWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVR-FGWDQFVSVAN 336
Query: 282 CMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
+++ +G ++ A + QM+ + D W +++ C G L E +L I+L
Sbjct: 337 SAINMYVKAGSVNYARRMFGQMK-EVDLISWNTVISGCARSG---LEECSLRLFIDL 389
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
L+P F+ L+ A S + G+R H ++ + D +V LI MYAKC + +A
Sbjct: 11 SLLPQWFSI---LRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSA 67
Query: 128 RQVFDKILERDPSEATLVTVISASADIAAL------------------------------ 157
R++FD + D T +++A A L
Sbjct: 68 RKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSP 127
Query: 158 ----------PQGRE-LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
P E L G++ + + +V V ALV++YAK ++ AR LF+++ +
Sbjct: 128 LFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRD 187
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFD 258
VV WN M+ Y G + L LF + ++PD ++ +L + +F+
Sbjct: 188 VVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFE 240
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/522 (40%), Positives = 314/522 (60%), Gaps = 36/522 (6%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV-PDNFTFPFALKACS 84
A+ +F I N+F WN +IR YA + A L+YR + + V PD T+PF LKA S
Sbjct: 71 AYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAF-LFYRQMVVSCVEPDTHTYPFLLKAIS 129
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------ 138
+ EG IH IRN +E+ VFV +L+ +YA C +A +VF+ + ERD
Sbjct: 130 KSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNS 189
Query: 139 ----------PSEA-----------------TLVTVISASADIAALPQGRELHGFSWRHR 171
P+EA T+V+++SASA++ AL GR +H + +
Sbjct: 190 MINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVG 249
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
N V +L+D+YAKCG ++ A+ +F ++ E+ VSW ++I G A++G +AL+LF+
Sbjct: 250 LSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFK 309
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+M+ + + P ITFVGVL ACS G+ DEG +F M + I P ++HY CMVDLL +
Sbjct: 310 EMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRA 369
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
G + +A + I M V+P+ +W LL +C +HGH+ L E+A L+ LEP +G+YV+LS
Sbjct: 370 GLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLS 429
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
N+YA W V +R+ M+ G+KK+ S +E+ N+ + F GD SHP ++YA L+
Sbjct: 430 NLYASERRWSDVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLE 489
Query: 411 WLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLK 470
+ +K GYVP T +V D+E +EK + HSE++AIAF L+NTP GT + + KNL+
Sbjct: 490 KITELLKLEGYVPHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLR 549
Query: 471 ICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+C DCH+AIK I+KI +REI +RD +R+HHF+ G CSC DYW
Sbjct: 550 VCADCHMAIKLIAKIYDREIVIRDRSRFHHFRGGSCSCKDYW 591
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 120/259 (46%), Gaps = 41/259 (15%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+H+Y+AC +A+++F+ + +R+L WN +I +A NG A+ L+
Sbjct: 148 GFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLF 207
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ PD FT L A + L A+E GRR+H +++ + V +L+D+YAKC
Sbjct: 208 REMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKC 267
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ A++VF ++ ER+ PSE T V V+
Sbjct: 268 GAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVL 327
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTA----LVDMYAKCGLVKVARNLFEQLR- 203
A + L +G E + R + E + + +VD+ ++ GLVK A + +
Sbjct: 328 YACSHCGMLDEGFE---YFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPV 384
Query: 204 EKRVVSWNAMITGYAMHGH 222
+ V W ++ +HGH
Sbjct: 385 QPNAVIWRTLLGACTIHGH 403
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 6/199 (3%)
Query: 161 RELHGFSWRHRFELNVK--VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
+++H FS RH LN K + + + + A N+F + V +WN +I GYA
Sbjct: 35 KQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIRGYA 94
Query: 219 MHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
+ + A + +M V+PD T+ +L A S+ EG +R+ + V
Sbjct: 95 ESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRN-GFESLV 153
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
++ + G + A + M+ + D W +++N L+G A L L + +
Sbjct: 154 FVQNSLLHIYAACGDTESAYKVFELMKER-DLVAWNSMINGFALNGRPNEA-LTLFREMS 211
Query: 338 LEPHDAGNYVILSNIYARA 356
+E + + ++S + A A
Sbjct: 212 VEGVEPDGFTVVSLLSASA 230
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/541 (40%), Positives = 306/541 (56%), Gaps = 35/541 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
FG P + L+ +YS+ + A +F R R+L W +I Y + A+E Y
Sbjct: 339 FGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYK 398
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+ G++PD T L ACS L ++ G +HE + + V +LIDMYAKC
Sbjct: 399 MMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCK 458
Query: 123 CVVNARQVFDKILERD--------------------------------PSEATLVTVISA 150
C+ A ++F LE++ P+ TLV V+SA
Sbjct: 459 CIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRRLKPNSVTLVCVLSA 518
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
A I AL G+E+H + R + + A++DMY +CG ++ A F + + V SW
Sbjct: 519 CARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSV-DHEVTSW 577
Query: 211 NAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
N ++TGYA G A +LF++M + V P+ +TF+ +L ACSR G+ EG +F SM
Sbjct: 578 NILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKY 637
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
Y I P+++HY C+VDLLG SG+L+EA + I +M +KPDP VWGALLNSC++H HV+L E
Sbjct: 638 KYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGE 697
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
LA E + + + G Y++LSN+YA W+ VA++RK+M G+ CSW+EVK
Sbjct: 698 LAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTV 757
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLA 449
HAFLS D HP EI A L+ +MKEAG V G ES D+ KA++ C HSERLA
Sbjct: 758 HAFLSSDNFHPQIKEINALLERFYKKMKEAG-VEGPESSHMDIMEASKADIFCGHSERLA 816
Query: 450 IAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
I FGLIN+ G + +TKNL +C CH +KFIS+ REI+VRD ++HHFK GICSC
Sbjct: 817 IVFGLINSGPGMPIWVTKNLYMCQSCHNIVKFISREVRREISVRDAEQFHHFKGGICSCT 876
Query: 510 D 510
D
Sbjct: 877 D 877
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/278 (35%), Positives = 145/278 (52%), Gaps = 34/278 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+ ++ L +A +F R+ +RNLF WNVL+ YA G ++ A++LY+R+L +G
Sbjct: 143 LGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVG 202
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD +TFP L+ C + + GR IH VIR +E+DV V ALI MY KC V AR
Sbjct: 203 VKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTAR 262
Query: 129 QVFDKILER---------------------------------DPSEATLVTVISASADIA 155
VFDK+ R DP T+ +VI+A +
Sbjct: 263 LVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLG 322
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
GR++HG+ R F + + +L+ MY+ GL++ A +F + + +VSW AMI+
Sbjct: 323 DDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMIS 382
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACS 252
GY KAL+ ++ M+ E + PD IT VLSACS
Sbjct: 383 GYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACS 420
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 130/293 (44%), Gaps = 33/293 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+ +Y C ++ A +FD++P R+ WN +I Y NG + L+
Sbjct: 237 GFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLF 296
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+++ + PD T + AC L GR+IH V+R ++ D + +LI MY+
Sbjct: 297 GMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSV 356
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ A VF + RD P E T+ V+
Sbjct: 357 GLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVL 416
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA + + L G LH + + V +L+DMYAKC + A +F EK +V
Sbjct: 417 SACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIV 476
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGR 261
SW ++I G ++ +AL F +M ++P+ +T V VLSAC+R G G+
Sbjct: 477 SWTSIILGLRINNRCFEALFFFREMIRRLKPNSVTLVCVLSACARIGALTCGK 529
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 144/311 (46%), Gaps = 46/311 (14%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
++ C A +EG R++ V + + +G AL+ M+ + +V+A VF ++ +R+
Sbjct: 113 IRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNL 172
Query: 139 --------------------------------PSEATLVTVISASADIAALPQGRELHGF 166
P T V+ + L +GRE+H
Sbjct: 173 FSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVH 232
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
R+ FE +V V AL+ MY KCG V AR +F+++ + +SWNAMI+GY +G +
Sbjct: 233 VIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEG 292
Query: 227 LDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMV 284
L LF M K V PD +T V++AC G GR ++R ++ DPS+ + ++
Sbjct: 293 LRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSI--HNSLI 350
Query: 285 DLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE--KLIELE--- 339
+ G ++EA + + + D W A+++ + + + + ALE K++E E
Sbjct: 351 PMYSSVGLIEEAETVFSRTECR-DLVSWTAMISG---YENCLMPQKALETYKMMEAEGIM 406
Query: 340 PHDAGNYVILS 350
P + ++LS
Sbjct: 407 PDEITIAIVLS 417
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 122/279 (43%), Gaps = 39/279 (13%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + ++A L+ +Y+ C C+ A ++F ++N+ W +I N A+ +
Sbjct: 439 GLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEAL-FF 497
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+R + L P++ T L AC+ + A+ G+ IH +R D F+ A++DMY +C
Sbjct: 498 FREMIRRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRC 557
Query: 122 SCV------------------------------VNARQVFDKILERD--PSEATLVTVIS 149
+ +A ++F +++E + P+E T ++++
Sbjct: 558 GRMEYAWKQFFSVDHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILC 617
Query: 150 ASADIAALPQGRE-LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR-V 207
A + + +G E + +++ N+K +VD+ + G ++ A +++ K
Sbjct: 618 ACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDP 677
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVG 246
W A++ +H H ++L E + + D T VG
Sbjct: 678 AVWGALLNSCRIHHH----VELGELAAENIFQDDTTSVG 712
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/553 (40%), Positives = 321/553 (58%), Gaps = 69/553 (12%)
Query: 29 LFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSA 88
+F ++ N FLW LIR YA GP+ ++ LY + G+ P +FTF LKACSA
Sbjct: 95 VFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALD 154
Query: 89 IEEGRRIH-EDVIRNKWETDVFVGAALIDMY----------------------------- 118
+ GR++H + ++ + +D++VG LIDMY
Sbjct: 155 VNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIV 214
Query: 119 --AKCSCVVNARQVFDKILERD----------------PSEA-----------------T 143
AK + A ++FD + +D P EA T
Sbjct: 215 AYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVT 274
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRF--ELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
LV VISA A + A + + + F NV V +AL+DMYAKCG V+ A +FE+
Sbjct: 275 LVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFER 334
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEG 260
+ E+ V S+++MI G+AMHG + A++LF++M K E++P+ +TF+GVL+ACS G+ ++G
Sbjct: 335 MEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQG 394
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
+ F M + + PS HY CMVDLLG +GRL+EA +L+ M + P GVWGALL +C+
Sbjct: 395 QQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACR 454
Query: 321 LHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIAC 380
+HG+ +A++A L ELEP+ GNY++LSNIYA A W+ V+K+RKLM +G+KK+ C
Sbjct: 455 IHGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGC 514
Query: 381 SWIEVKNK-AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKAN 439
SW+E K H F +GD SHP EI L+ L R+K GY P SV +D+ ++EK
Sbjct: 515 SWVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKR 574
Query: 440 MICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYH 499
++ HSE+LA+AFGL+ T G + I KNL+IC+DCH + S+IT REI VRD R+H
Sbjct: 575 LLMSHSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIVVRDNMRFH 634
Query: 500 HFKDGICSCGDYW 512
HF+DG CSCG++W
Sbjct: 635 HFRDGRCSCGNFW 647
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 4 GFHP----VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIE 59
GF P V+ + L+ +Y+ C + +A+++F+R+ +RN++ ++ +I +A +G A+E
Sbjct: 302 GFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAME 361
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRI 95
L+ +L+ + P+ TF L ACS +E+G+++
Sbjct: 362 LFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQL 397
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Query: 136 ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK--CGLVK 193
E+ E+ LV+V+ I Q +++H +R E V L+ K +
Sbjct: 34 EQKILESRLVSVLHGCTHIN---QVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDP 90
Query: 194 VARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACS 252
R +F+Q+ W A+I GYA+ G +++ L+ M+ + + P TF +L ACS
Sbjct: 91 YPRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACS 150
Query: 253 RGGLFDEGR 261
+ GR
Sbjct: 151 AALDVNLGR 159
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/582 (37%), Positives = 316/582 (54%), Gaps = 71/582 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF V+AT L+++Y C H A ++FD++ +R++ WNV+I Y NG + A+ELY
Sbjct: 237 GFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELY 296
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+L G TF L ACS++ A+ +GR +H ++ +++V V AL++MYAKC
Sbjct: 297 QKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKC 356
Query: 122 SC------VVNA----------------------------RQVFDKILERD--------- 138
V NA R+VFD++ RD
Sbjct: 357 GSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMIT 416
Query: 139 -------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFE 173
P T + V+ A A + L + + LH E
Sbjct: 417 TYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELE 476
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
NV V L++MYA+CG ++ A LF +EK VVSW AM+ ++ +G +ALDLF++M
Sbjct: 477 SNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEM 536
Query: 234 KDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGR 292
E V+PD +T+ +L C+ GG ++G +F M + + P+ H+ MVDLLG SGR
Sbjct: 537 DLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGR 596
Query: 293 LDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNI 352
L +A +L+ M +PDP W L +C++HG ++L E A E++ EL+P Y+ +SNI
Sbjct: 597 LFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNI 656
Query: 353 YARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWL 412
YA WE VA +RK M +RG+KK S+IEV K H F SG HP DEI +L L
Sbjct: 657 YAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRL 716
Query: 413 EGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINT-PDGTRLLITKNLKI 471
G M+ AGYVP T++V HDV EK M+ HSE++AIAFGL+++ G + + KNL++
Sbjct: 717 HGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRV 776
Query: 472 CDDCHIAIKFISKITEREITVRDVNRYHHF-KDGICSCGDYW 512
C DCH A KFI++I R+I +RD NR+H F DG CSCGDYW
Sbjct: 777 CSDCHTATKFIARIAGRDIILRDCNRFHRFSSDGKCSCGDYW 818
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 199/418 (47%), Gaps = 40/418 (9%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEVAIEL 60
F ++ L+ +Y CD L +A +F+ + QRN+ WN +I AYA NG A+ L
Sbjct: 38 FERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVL 97
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
Y+R+ GL D+ TF L ACS+L+ +GR IH V + ++ + AL+ MYA+
Sbjct: 98 YWRMNLQGLGTDHVTFVSVLGACSSLA---QGREIHNRVFYSGLDSFQSLANALVTMYAR 154
Query: 121 CSCVVNARQVFDKILERD--------------------------------PSEATLVTVI 148
V +A+++F + RD P+ T + VI
Sbjct: 155 FGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCDMKPNSTTYINVI 214
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
S + LP+GR++H + F+ ++ V TAL++MY KCG AR +F++++++ +V
Sbjct: 215 SGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMV 274
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWN MI Y +G +AL+L++K+ E + TFV +L ACS +GR+ S
Sbjct: 275 SWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRL-VHSH 333
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ + +D V T +V++ G L+EA + M+ + D W L+ + +G+ K
Sbjct: 334 ILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNR-DAVAWSTLIGAYASNGYGKD 392
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
A A + L D + + Y + K+ + M K A ++I V
Sbjct: 393 ARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAV 450
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 191/420 (45%), Gaps = 76/420 (18%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G LA LV +Y+ + +A ++F + R+ WN +I A++ +G + A+ ++
Sbjct: 137 GLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIF 196
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ ++ + P++ T+ + S + EGR+IH +++ N +++D+ V ALI+MY KC
Sbjct: 197 -KEMKCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKC 255
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
AR+VFDK+ +RD ++AT V+++
Sbjct: 256 GSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSIL 315
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A + + AL QGR +H + V V TALV+MYAKCG ++ AR +F ++ + V
Sbjct: 316 GACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAV 375
Query: 209 S----------------------------------WNAMITGYAMHGHSTKALDLFEKMK 234
+ WNAMIT Y +G + A+ +F +M
Sbjct: 376 AWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMT 435
Query: 235 DE--VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGR 292
++PD +TF+ VL AC+ G E + + + + ++ +V ++++ G
Sbjct: 436 GAAGLKPDAVTFIAVLEACASLGRLSEVKA-LHAQISESELESNVVVTNTLINMYARCGS 494
Query: 293 LDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE---PHDAGNYVIL 349
L+EA L + K W A++ + +G A L L + ++LE P D IL
Sbjct: 495 LEEAERLFAAAKEKTVVS-WTAMVAAFSQYGRYAEA-LDLFQEMDLEGVKPDDVTYTSIL 552
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 167/346 (48%), Gaps = 39/346 (11%)
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PDN TF L +CS+ + EGR +HE + +++E D VG ALI MY KC +V+AR V
Sbjct: 5 PDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 131 FDKILERD------------------PSEATL--------------VTVISASADIAALP 158
F+ + R +EA + VT +S ++L
Sbjct: 65 FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA 124
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
QGRE+H + + + ALV MYA+ G V A+ +F+ L+ + SWNA+I ++
Sbjct: 125 QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHS 184
Query: 219 MHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
G + AL +F++MK +++P+ T++ V+S S + EGR +V + D +
Sbjct: 185 QSGDWSGALRIFKEMKCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVAN-GFDSDLV 243
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
T ++++ G G EA ++ +M+ K D W ++ +G A L L + +++
Sbjct: 244 VATALINMYGKCGSSHEAREVFDKMK-KRDMVSWNVMIGCYVQNGDFHEA-LELYQKLDM 301
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKL---MIDRGIKKSIACS 381
E +S I ++ + +A+ R + +++RG+ +A +
Sbjct: 302 EGFKRTKATFVS-ILGACSSVKALAQGRLVHSHILERGLDSEVAVA 346
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 12/187 (6%)
Query: 135 LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV 194
++R P T +TV+ + + + +GR LH RFE + V AL+ MY KC +
Sbjct: 1 MDRQPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVD 60
Query: 195 ARNLFEQL--REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSAC 251
AR++FE + R++ VVSWNAMI YA +GHST+AL L+ +M + + DH+TFV VL AC
Sbjct: 61 ARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC 120
Query: 252 SRGGLFDE--GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
S E R+F+ + D +V + G + +A + ++ + D
Sbjct: 121 SSLAQGREIHNRVFYSGL------DSFQSLANALVTMYARFGSVGDAKRMFQSLQTR-DE 173
Query: 310 GVWGALL 316
W A++
Sbjct: 174 TSWNAVI 180
>gi|15231831|ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14330
gi|332641981|gb|AEE75502.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/545 (38%), Positives = 321/545 (58%), Gaps = 38/545 (6%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLF---LWNVLIRAYAWNGPYEVAIELYY 62
+P L +KL+ L+S C L A ++FD + +L +W + Y+ NG A+ +Y
Sbjct: 166 NPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYV 225
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+L + P NF+ ALKAC L + GR IH +++ K + D V L+ +Y +
Sbjct: 226 DMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESG 285
Query: 123 CVVNARQVFDKILERDP---------------------------------SEATLVTVIS 149
+AR+VFD + ER+ S ATL T++
Sbjct: 286 LFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILP 345
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A + +AAL G+E+H + + + +V + +L+DMY KCG V+ +R +F+ + K + S
Sbjct: 346 ACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLAS 405
Query: 210 WNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WN M+ YA++G+ + ++LFE M + V PD ITFV +LS CS GL + G FE M
Sbjct: 406 WNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMK 465
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
++ + P+++HY C+VD+LG +G++ EA +I M KP +WG+LLNSC+LHG+V +
Sbjct: 466 TEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVG 525
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
E+A ++L LEPH+ GNYV++SNIYA A W+ V K+R++M RG+KK CSW++VK+K
Sbjct: 526 EIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDK 585
Query: 389 AHAFLSGDA-SHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
F++G N DE L+ ++++GY P T V HDV+ + KAN +C HSER
Sbjct: 586 IQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSER 645
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA + LI+T +G + ITKNL++C DCH +K +S++T R I +RD R+HHF DGICS
Sbjct: 646 LATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICS 705
Query: 508 CGDYW 512
C DYW
Sbjct: 706 CKDYW 710
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/548 (39%), Positives = 321/548 (58%), Gaps = 37/548 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYA-WNGPYEVAIE 59
+GF L+++YS C CL +A ++FD++ + + W +I +A W+ P E A+
Sbjct: 114 LGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNE-AVR 172
Query: 60 LYYRLLEIGLV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
L+ R+++ V P+ T L AC+ + +RIHE + + + V + L+D+Y
Sbjct: 173 LFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVY 232
Query: 119 AKCSCVVNARQVFDKILERD---------------------------------PSEATLV 145
KC CV AR +FDK E++ + T+
Sbjct: 233 CKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMA 292
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+++ A + AL G+ LH + + R +++V + TALVDMYAKCG ++ A +F ++ EK
Sbjct: 293 SLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEK 352
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF 264
V++W A+I G AM G + AL F++M + V+PD ITFVGVL+ACS G DEG F
Sbjct: 353 DVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHF 412
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
SM Y I P+++HY +VD+LG +GR+ EA +LI M + PD V G LL +C++HG+
Sbjct: 413 NSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGN 472
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
++ AE A ++L+E++P+ +G YV+LSNIY + WE + R+LM +RG++K CS IE
Sbjct: 473 LEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIE 532
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
V H F+ GD+SH EI L+ + ++K AGYVP V D+ +EK + H
Sbjct: 533 VHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETELSLH 592
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SE+LAIAFGL++T GT + + KNL+IC DCH A K ISK+ REI VRD NR+HHFKDG
Sbjct: 593 SEKLAIAFGLLSTSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRNRFHHFKDG 652
Query: 505 ICSCGDYW 512
CSC +W
Sbjct: 653 TCSCRGFW 660
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 200/419 (47%), Gaps = 50/419 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDC--LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIE 59
G F P A+K+V S + L A +F +IP + N +IR ++ A+
Sbjct: 15 GLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEALL 74
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
Y ++ GL+PD +TFP K+C S EG++IH + + +D + L++MY+
Sbjct: 75 FYQEMMVQGLIPDRYTFPSLFKSCRNSS---EGKQIHCHSTKLGFASDTYAQNTLMNMYS 131
Query: 120 KCSCVVNARQVFDKILER----------------------------------DPSEATLV 145
C C+V+AR+VFDK+ ++ P+E TLV
Sbjct: 132 NCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLV 191
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
V++A A L + +H + H F +V + T L+D+Y KCG V++AR+LF++ +EK
Sbjct: 192 NVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEK 251
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF 264
+ SWN MI G+ + +AL LF +M+ + ++ D +T +L AC+ G + G+ +
Sbjct: 252 NLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGK-WL 310
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+ ++ ID V T +VD+ G ++ A + +M K D W AL+ + G
Sbjct: 311 HAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEK-DVMTWTALILGLAMCGQ 369
Query: 325 VKLAELALEKLIELE----PHDAGNYV-ILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
AE AL+ E+ DA +V +L+ EG++ + GI+ +I
Sbjct: 370 ---AENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTI 425
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/539 (38%), Positives = 317/539 (58%), Gaps = 34/539 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++A V Y+ C LH A +F + + + WN LI + NG A++LY +
Sbjct: 437 LVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGS 496
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
GL PD FT L AC+ L ++ G+ IH ++RN +E D F+ +L+ +Y +C ++ A
Sbjct: 497 GLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLA 556
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
+ FD + E++ P E +++ + A + +
Sbjct: 557 KLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQV 616
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
+AL G+ELH F+ + + V +L+DMYAKCG ++ ++N+F+++ K V+WN +I
Sbjct: 617 SALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLI 676
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
TGY +HGH KA++LF+ M++ +PD +TF+ +L+AC+ GL EG + M + I
Sbjct: 677 TGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGI 736
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P ++HY C+VD+LG +GRL+EA +L+ ++ KPD +W +LL+SC+ + + + E
Sbjct: 737 KPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVAN 796
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
KL+EL P A NYV++SN YAR W+ V K+R+ M + G++K CSWIE+ K FL
Sbjct: 797 KLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFL 856
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD S +I LE ++ + GY P T V H++E DEK ++ HSE+LAI+FG
Sbjct: 857 VGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSEKLAISFG 916
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+NT GT L + KNL+IC DCH AIK +SKI +REI VRD R+HHFK+G CSCGDYW
Sbjct: 917 LLNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 145/282 (51%), Gaps = 39/282 (13%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL T+LV +YS CD +++ +F+ ++NLFLWN L+ Y N + A+ ++ ++ +
Sbjct: 130 VLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISL 189
Query: 68 G-LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
VPDNFT P +KAC + + G +H ++ K +DVFVG ALI MY K V +
Sbjct: 190 TEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVES 249
Query: 127 ARQVFDKILERD-----------------------------------PSEATLVTVISAS 151
A +VFDK+ +R+ P AT+VTVI
Sbjct: 250 AVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLC 309
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
A + G HG + + +KV ++L+DMY+KCG + AR LF+ EK V+SWN
Sbjct: 310 ARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDT-NEKNVISWN 368
Query: 212 AMITGYAMHGHSTKALDLFEKMK--DEVQPDHITFVGVLSAC 251
+MI GY+ A +L KM+ D+V+ + +T + VL C
Sbjct: 369 SMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVC 410
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 143/299 (47%), Gaps = 37/299 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL--E 66
+ L+ +Y + +A ++FD++PQRNL WN ++ A NG +E + L+ LL +
Sbjct: 233 VGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGD 292
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
GL+PD T + C+ + G H ++ ++ V ++L+DMY+KC +
Sbjct: 293 EGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCE 352
Query: 127 ARQVFD------------------------------KILERDP---SEATLVTVISASAD 153
AR +FD K+ D +E TL+ V+ +
Sbjct: 353 ARVLFDTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEE 412
Query: 154 IAALPQGRELHGFSWRHRF-ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+ +E+HG++ RH F + + V A V YAKCG + A +F + K V SWNA
Sbjct: 413 EIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNA 472
Query: 213 MITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
+I G+ +G KALDL+ M+ ++PD T +LSAC+R G+ SM+R+
Sbjct: 473 LIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRN 531
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 115/255 (45%), Gaps = 39/255 (15%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNK-WETDVFVGAALIDMYAKC-----SCVV-------- 125
L+ C IE GR+IH + + ++ DV + L+ MY+ C SC+V
Sbjct: 100 LQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKN 159
Query: 126 ------------------NARQVFDKIL---ERDPSEATLVTVISASADIAALPQGRELH 164
+A VF +++ E P TL VI A + + G +H
Sbjct: 160 LFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVH 219
Query: 165 GFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST 224
GF+ + + +V V AL+ MY K G V+ A +F+++ ++ +VSWN+++ +G
Sbjct: 220 GFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFE 279
Query: 225 KALDLFEKM---KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYT 281
++ LF+ + + + PD T V V+ C+R G G M F + + ++ +
Sbjct: 280 ESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLG-MVFHGLALKLGLCGELKVNS 338
Query: 282 CMVDLLGHSGRLDEA 296
++D+ G L EA
Sbjct: 339 SLLDMYSKCGYLCEA 353
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
H + L+ +Y+ C C+ + +FDR+ + WNVLI Y +G AIEL+ +
Sbjct: 637 HSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQ 696
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEG 92
G PD+ TF L AC+ + EG
Sbjct: 697 NAGFRPDSVTFIALLTACNHAGLVAEG 723
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/548 (40%), Positives = 310/548 (56%), Gaps = 39/548 (7%)
Query: 4 GFH--PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFH + LV +Y+ C CL A +F+ I +R + W+ +I AYA +G + A+ L+
Sbjct: 15 GFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGRGQEALLLF 74
Query: 62 YRLLEIGLV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMY 118
+R+ G V P+ TF AC + +E+GR IH + + ++ + AL++MY
Sbjct: 75 HRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMY 134
Query: 119 AKCSCVVNARQVFDKILERD---------------------------------PSEATLV 145
+C + AR+VFD + D P+ TL
Sbjct: 135 VRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLA 194
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+V++A A AL G+++H F +V +TAL+DMYAKCG ++ + +F + +
Sbjct: 195 SVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETR 254
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF 264
VSW AMI A HG +AL+LF++M E + D TF+ VL ACS GL E FF
Sbjct: 255 NSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFF 314
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
SMV DY I P+ HY +D +G +GRL +A +LI M P+ W LLN+C++H
Sbjct: 315 HSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQ 374
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
+ A E L +L P D+ Y +L N+YA + ++RK M DRG+KK S+IE
Sbjct: 375 AERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMTDRGLKKVPGKSFIE 434
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
VKNK H F++GD +HP+ DEI +L+ L GRM+EAGYVP T+ V H V +EK +I H
Sbjct: 435 VKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLHAVNEEEKEQLIGLH 494
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SE+LAIAFGLI TP GT LLI KNL++C DCH A K I+KI R I VRD +R+HHF+DG
Sbjct: 495 SEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIVVRDTHRFHHFEDG 554
Query: 505 ICSCGDYW 512
CSC DYW
Sbjct: 555 QCSCKDYW 562
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 130/308 (42%), Gaps = 62/308 (20%)
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
+ +GR +H F + LV MYAKCG + AR +F + E+ VVSW+AMI
Sbjct: 1 MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60
Query: 217 YAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACS---------------------- 252
YA+HG +AL LF +M+++ V+P+ +TF GV +AC
Sbjct: 61 YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELK 120
Query: 253 ---------------RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
R G +E R F++M D+ P +T M+ + L EA
Sbjct: 121 SSNAILENALLNMYVRCGSLEEARKVFDTM--DH---PDAFSWTSMITACTENCELLEAL 175
Query: 298 DLIMQMR---VKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAG-NYVILSNIY 353
+L +M + P ++LN+C G +K+ + +L H + L ++Y
Sbjct: 176 ELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMY 235
Query: 354 ARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKW-- 411
A+ + E +K+ M R + SW A ++ A H DE K
Sbjct: 236 AKCGSLECSSKVFTAMETRN-----SVSWT-------AMIAALAQHGQGDEALELFKEMN 283
Query: 412 LEGRMKEA 419
LEG + +A
Sbjct: 284 LEGMVADA 291
>gi|9279581|dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]
Length = 717
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/545 (38%), Positives = 321/545 (58%), Gaps = 38/545 (6%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLF---LWNVLIRAYAWNGPYEVAIELYY 62
+P L +KL+ L+S C L A ++FD + +L +W + Y+ NG A+ +Y
Sbjct: 173 NPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYV 232
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+L + P NF+ ALKAC L + GR IH +++ K + D V L+ +Y +
Sbjct: 233 DMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESG 292
Query: 123 CVVNARQVFDKILERDP---------------------------------SEATLVTVIS 149
+AR+VFD + ER+ S ATL T++
Sbjct: 293 LFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILP 352
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A + +AAL G+E+H + + + +V + +L+DMY KCG V+ +R +F+ + K + S
Sbjct: 353 ACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLAS 412
Query: 210 WNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WN M+ YA++G+ + ++LFE M + V PD ITFV +LS CS GL + G FE M
Sbjct: 413 WNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMK 472
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
++ + P+++HY C+VD+LG +G++ EA +I M KP +WG+LLNSC+LHG+V +
Sbjct: 473 TEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVG 532
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
E+A ++L LEPH+ GNYV++SNIYA A W+ V K+R++M RG+KK CSW++VK+K
Sbjct: 533 EIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDK 592
Query: 389 AHAFLSGDA-SHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
F++G N DE L+ ++++GY P T V HDV+ + KAN +C HSER
Sbjct: 593 IQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSER 652
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA + LI+T +G + ITKNL++C DCH +K +S++T R I +RD R+HHF DGICS
Sbjct: 653 LATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICS 712
Query: 508 CGDYW 512
C DYW
Sbjct: 713 CKDYW 717
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/536 (38%), Positives = 314/536 (58%), Gaps = 35/536 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
+ L+HLY+ + +A ++F R+P+R+ W+ ++ + G AI++Y R+ E G+
Sbjct: 147 SSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVK 206
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
D ++AC+A + G +H ++R+ DV +L+DMYAK + A +V
Sbjct: 207 GDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRV 266
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F ++ R+ P LV+ + A ++I L
Sbjct: 267 FGLMVHRNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFL 326
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
GR +HGF R RF+ N + TA +DMY+KCG + A+ LF + ++ ++ WNAMI
Sbjct: 327 KLGRSVHGFIVR-RFDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACC 385
Query: 218 AMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
HG AL LF++M + ++PDH TF +LSA S GL +EG+++F MV + I P+
Sbjct: 386 GAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPA 445
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
+HY C+VDLL SG ++EA DL+ M+ +P +W ALL+ C + ++L E + ++
Sbjct: 446 EKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNIL 505
Query: 337 ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGD 396
EL+P D G ++SN+YA W+ V ++RKLM D G KK CS IE++ H F+ D
Sbjct: 506 ELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMED 565
Query: 397 ASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLIN 456
SHP +EI +K+ L+ M++ GY+P TE V+HD+E + K + HSERLAIAFGL+N
Sbjct: 566 QSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLN 625
Query: 457 TPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
T GTRL+I KNL++C DCH AIK+ISKI +REI VRD R+HHFKDG+CSC DYW
Sbjct: 626 TGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 147/327 (44%), Gaps = 39/327 (11%)
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+R L PD+ TF AL AC+ L + G + + ++ DVFV ++L+ +YA+
Sbjct: 97 FRALPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARW 156
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +A +VF ++ RD E ++ VI
Sbjct: 157 GAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVI 216
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A + G +HG RH ++V T+LVDMYAK GL+ VA +F + + V
Sbjct: 217 QACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDV 276
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SW+AMI+G+A +G S +AL LF M+ +QPD V L ACS G GR +
Sbjct: 277 SWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFI 336
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
VR + + + T +D+ G L A ++ M D +W A++ C HG +
Sbjct: 337 VRRFDFNCILG--TAAIDMYSKCGSLASA-QMLFNMISDRDLILWNAMIACCGAHGRGQD 393
Query: 328 AELALEKLIE--LEPHDAGNYVILSNI 352
A +++ E + P A +LS +
Sbjct: 394 ALTLFQEMNETGMRPDHATFASLLSAL 420
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 136/287 (47%), Gaps = 45/287 (15%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G V AT LV +Y+ L A ++F + RN W+ +I +A NG + A+ L+
Sbjct: 239 GMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSDEALRLF 298
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ PD+ AL ACS + ++ GR +H ++R +++ + +G A IDMY+KC
Sbjct: 299 RNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVR-RFDFNCILGTAAIDMYSKC 357
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +A+ +F+ I +RD P AT +++
Sbjct: 358 GSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLL 417
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVK--TALVDMYAKCGLVKVARNLFEQLR-EK 205
SA + + +G+ G H F++ K LVD+ A+ GLV+ A +L ++ E
Sbjct: 418 SALSHSGLVEEGKLWFGRMVNH-FKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEP 476
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKD---EVQPDHITFVGVLS 249
V W A+++G + K L+L E + D E+QPD + + ++S
Sbjct: 477 TVAIWVALLSGCL----NNKKLELGESIADNILELQPDDVGVLALVS 519
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/539 (38%), Positives = 321/539 (59%), Gaps = 35/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T L+++Y+AC L +A LF+R+ RN +W +I Y N A+ LY ++ E G
Sbjct: 116 IETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDG 175
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
PD T + AC+ L + G ++H + + +G+AL++MYAKC + AR
Sbjct: 176 FSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTAR 235
Query: 129 QVFDKILERD----------------------------------PSEATLVTVISASADI 154
QVFD++ ++D P+E T++ VISA A +
Sbjct: 236 QVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQL 295
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L GR +H + R + +V + +L+DM++KCG + A+ +F+ + K ++SWN+M+
Sbjct: 296 GDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMV 355
Query: 215 TGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
G A+HG +AL F M+ ++QPD ITF+GVL+ACS GL EG+ F + Y +
Sbjct: 356 NGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGV 415
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
+HY CMVDLL +G L EA + I M ++PD +WG++L +C+++ +++L E A
Sbjct: 416 RLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAAR 475
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
L+ELEP + G Y++LSNIYAR W V K+R+LM ++GI+K+ CS + + N AH+FL
Sbjct: 476 CLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFL 535
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
+GD SHP EI L+ + ++K GYV T V ++++++K + HSE+LA+ +G
Sbjct: 536 AGDCSHPEIAEISIMLRQVREKLKLVGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYG 595
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+ + G R++I KNL++C DCH IK +SKI +R+IT+RD NR+HHFKDG CSC DYW
Sbjct: 596 LLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 193/385 (50%), Gaps = 50/385 (12%)
Query: 2 GFGFH-PVLATKLVHLYSACDC-LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIE 59
GF H P L + H+ S + A+ +F ++ WN ++RA+ + A++
Sbjct: 5 GFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQ 64
Query: 60 LYYRLLEIGL-VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
Y +LE VPD FTFP LK C+ L + G+ +H V++ +D+++ L++MY
Sbjct: 65 SYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMY 124
Query: 119 AKCSCVVNARQVFDKILERD---------------------------------PSEATLV 145
A C + +AR +F+++ R+ P E T+
Sbjct: 125 AACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMA 184
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKV----KTALVDMYAKCGLVKVARNLFEQ 201
T++SA A++ L G +LH H E+++K+ +ALV+MYAKCG +K AR +F+Q
Sbjct: 185 TLVSACAELKDLGVGMKLHS----HIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQ 240
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMK--DEVQPDHITFVGVLSACSRGGLFDE 259
L +K V +W+A+I GY + ST+AL LF ++ ++P+ +T + V+SAC++ G +
Sbjct: 241 LSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLET 300
Query: 260 GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC 319
GR + + R SV ++D+ G +D A + M K D W +++N
Sbjct: 301 GRWVHDYITRTQK-GHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYK-DLISWNSMVNGL 358
Query: 320 KLHGHVK--LAELALEKLIELEPHD 342
LHG + LA+ L + +L+P +
Sbjct: 359 ALHGLGREALAQFHLMQTTDLQPDE 383
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/538 (38%), Positives = 319/538 (59%), Gaps = 35/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+HLY C + AH++FD++ ++++ W LI YA N AI L +L+
Sbjct: 88 LDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGR 147
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P+ FTF LKA A + G +IH ++ W DV+VG+AL+DMYA+C + A
Sbjct: 148 FKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMAT 207
Query: 129 QVFDKI------------------------------LERDPSEATLVT---VISASADIA 155
VFDK+ ++R+ EAT T + S A I
Sbjct: 208 AVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIG 267
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL QG+ +H + R +L V ++DMYAK G + AR +FE++ K +V+WN+M+T
Sbjct: 268 ALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLT 327
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
+A +G +A+ FE+M K + + ITF+ +L+ACS GGL EG+ +F+ M+++Y+++
Sbjct: 328 AFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFD-MIKEYNLE 386
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY +VDLLG +G L+ A I +M ++P VWGALL +C++H + K+ + A +
Sbjct: 387 PEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADH 446
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
+ +L+P D+G V+L NIYA +W+ A++RK+M G+KK ACSW+E+ N H F++
Sbjct: 447 VFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVA 506
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
D +HP +EIY + ++++ GYVP + V V+ E+ + HSE++A+AF L
Sbjct: 507 NDDTHPRAEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFAL 566
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I P G + I KN++IC DCH A K+ISK+ EREI VRD NR+HHF +G CSCGDYW
Sbjct: 567 IQMPAGATIRIMKNIRICGDCHSAFKYISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 144/301 (47%), Gaps = 36/301 (11%)
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L P + + AC+ +++ R+IH + +++E D F+ +LI +Y KC VV A
Sbjct: 47 LAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAH 106
Query: 129 QVFDKILERD----------------PSEA-----------------TLVTVISASADIA 155
+VFDK+ ++D P+EA T +++ A+ A
Sbjct: 107 KVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
G ++H + + + +V V +AL+DMYA+CG + +A +F++L K VSWNA+I+
Sbjct: 167 DSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALIS 226
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+A G AL +F +M ++ + H T+ + S + G ++G+ MV+
Sbjct: 227 GFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKL 286
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
+ T M+D+ SG + +A + + + D W ++L + +G K A E+
Sbjct: 287 TAFVGNT-MLDMYAKSGSMIDARK-VFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEE 344
Query: 335 L 335
+
Sbjct: 345 M 345
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 136 ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
E P+ I+A A L R++HG RFE + + +L+ +Y KCG V A
Sbjct: 46 ELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEA 105
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRG 254
+F+++R+K +VSW ++I GYA + +A+ L M K +P+ TF +L A G
Sbjct: 106 HKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAA--G 163
Query: 255 GLFDE---GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV 311
D G++ ++ D+H D V + ++D+ G++D A + ++ K GV
Sbjct: 164 AYADSGIGGQIHALAVKCDWHEDVYVG--SALLDMYARCGKMDMATAVFDKLDSK--NGV 219
Query: 312 -WGALLNSCKLHGHVKLAELALEKLIELE 339
W AL++ G E AL E++
Sbjct: 220 SWNALISGFARKGD---GETALMVFAEMQ 245
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/541 (39%), Positives = 317/541 (58%), Gaps = 36/541 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++ T LV LY +A +F R+ R++ W+ ++ AYA NG A+ L+ ++
Sbjct: 112 IVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLD 171
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ P+ T L AC++L + G +H+ V ++ V VG AL+++Y KC + A
Sbjct: 172 GVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAA 231
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
+ F +I+E++ P+ T V+V+ A A I
Sbjct: 232 AEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAI 291
Query: 155 AALPQGRELHG--FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
AAL QGR +H E +V V TALV+MY+KCG + +A N+F+++ +V WN+
Sbjct: 292 AALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNS 351
Query: 213 MITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
+I A HG + KAL+LFE+M+ E +QP ITF VL ACS G+ D+GR F S + D+
Sbjct: 352 LIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDH 411
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
I P +H+ CMVDLLG +G + ++ DL++ M +P P W A L +C+ + ++ A A
Sbjct: 412 GIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWA 471
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHA 391
E L +L+P YV+LSN+YA+A W VA++R+ M K SWIEVK++ H
Sbjct: 472 AENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHE 531
Query: 392 FLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIA 451
F+SGD HP EI+A+L+ L MK AGYVP TE V HDV+ + K M+ HSE+LA+A
Sbjct: 532 FISGDLDHPRIGEIHAELQRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMA 591
Query: 452 FGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
F L+ TP+G+ + + KNL++C+DCH A KFISK+ REI VRD NR+H F++G CSCGDY
Sbjct: 592 FALLTTPEGSPIRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDY 651
Query: 512 W 512
W
Sbjct: 652 W 652
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 163/370 (44%), Gaps = 36/370 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G+ + L L+ LY+ CD +A +F I +N+F W +++ A+A N ++
Sbjct: 4 LGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLF 63
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ +L G+ P L AC+ I GR I ++ E + V AL+ +Y K
Sbjct: 64 FRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGK 123
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+A VF ++ RD P++ TLV+
Sbjct: 124 LGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSG 183
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A A + L G +H + V V TALV++Y KCG ++ A F Q+ EK V
Sbjct: 184 LDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNV 243
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V+W+A+ YA + + A+ + +M E + P+ TFV VL AC+ +GR E
Sbjct: 244 VAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHER 303
Query: 267 M-VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
+ V ++ V T +V++ G L A ++ ++ D +W +L+ + HG
Sbjct: 304 IHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKI-AHLDLVLWNSLIATNAQHGQT 362
Query: 326 KLAELALEKL 335
+ A E++
Sbjct: 363 EKALELFERM 372
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/542 (41%), Positives = 307/542 (56%), Gaps = 36/542 (6%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
+P + T L+ LY+ C LH A ++FD +P + W LI AY G A+ +
Sbjct: 152 NPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAF 211
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G+ PD+FT L AC+ ++ + G + + VFV A +D+Y KC +
Sbjct: 212 ANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMA 271
Query: 126 NARQVFDKILERD----------------PSEA-----------------TLVTVISASA 152
AR+VFDK+ ++D P EA + +SA
Sbjct: 272 KAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACT 331
Query: 153 DIAALPQGRE-LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+ AL GR+ + W F N + TAL+DMYAKCG A +F+Q+R+K ++ WN
Sbjct: 332 RLGALDLGRQAIRMVDW-DEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWN 390
Query: 212 AMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
AMI G M GH A L +M K V+ + TF+G+L +C+ GL +GR +F +M +
Sbjct: 391 AMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKL 450
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
YHI P ++HY C+VDLL +G L EA LI M + + + GALL CK+H + +LAE
Sbjct: 451 YHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEH 510
Query: 331 ALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAH 390
L +LI LEP ++GNYV+LSNIY+ WE AKLR M ++G++K ACSW+E + K H
Sbjct: 511 VLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVH 570
Query: 391 AFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAI 450
F GD SHP D+IY KL L MK GY P TE V DVE++EK + + HSE+LAI
Sbjct: 571 EFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAI 630
Query: 451 AFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGD 510
AF L+ T G + +TKNL++C DCH AIK IS+IT REI VRD NR+H F+DG CSC D
Sbjct: 631 AFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCND 690
Query: 511 YW 512
YW
Sbjct: 691 YW 692
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 4/193 (2%)
Query: 138 DPSEATL-VTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
+PS T + + SAS L G +LH S + N V T+L+ +YA+CGL+ A+
Sbjct: 114 NPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQ 173
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK-MKDEVQPDHITFVGVLSACSRGG 255
+F+++ VSW A+IT Y G +A+ + + ++PD T V VL+AC+R
Sbjct: 174 RVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVA 233
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
G + + ++ I SV T VDL G + +A ++ +MR K D WGA+
Sbjct: 234 DLATGETVWRAAEQE-GIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDK-DAVAWGAM 291
Query: 316 LNSCKLHGHVKLA 328
+ +GH + A
Sbjct: 292 VGGYASNGHPREA 304
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/538 (37%), Positives = 315/538 (58%), Gaps = 61/538 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ LY+ + +A F+ IP++++ W+ +I YA + + A+E+++++ +
Sbjct: 277 VGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQAL 336
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
++P+ FTF L+AC+ + + G +IH VI+ +DVFV AL+D+YAKC + N+
Sbjct: 337 VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSM 396
Query: 129 QVFDKILERD----------------------------------PSEATLVTVISASADI 154
+F + R+ +E T + + A A +
Sbjct: 397 XLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASL 456
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
AAL G ++H + + F+ ++ V AL+DMYAKCG +K AR +F+ + ++ VSWNAMI
Sbjct: 457 AALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMI 516
Query: 215 TGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
+GY+MHG AC+ GL D+G+ +F SM++D+ I+
Sbjct: 517 SGYSMHG---------------------------LACANAGLLDQGQAYFTSMIQDHGIE 549
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HYTCMV LLG G LD+A LI ++ +P VW ALL +C +H ++L ++ +
Sbjct: 550 PCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQH 609
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
++E+EP D +V+LSN+YA A W+ VA +RK M +G+KK SWIE + H+F
Sbjct: 610 VLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTV 669
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD SHP I L+WL + K+AGY+P V DVE++EK ++ HSERLA++FG+
Sbjct: 670 GDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGI 729
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I TP G+ + I KNL+IC DCH AIK ISK+ +REI VRD+NR+HHF++G+CSCGDYW
Sbjct: 730 IRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 787
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 169/358 (47%), Gaps = 37/358 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + T L+ YS C + A ++FD I +++ W ++ +A N ++ A++L
Sbjct: 168 LGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKL 227
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ +G P+NFTF KAC L A + G+ +H +++++E D++VG AL+D+Y K
Sbjct: 228 FSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTK 287
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ +AR F++I ++D P++ T +V
Sbjct: 288 SGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASV 347
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF-EQLREKR 206
+ A A + L G ++H + +V V AL+D+YAKCG ++ + LF E
Sbjct: 348 LQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRND 407
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V WN +I G+ G KAL LF M + VQ +T+ L AC+ + G +
Sbjct: 408 VTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPG-LQIH 466
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
S+ D + ++D+ G + +A L+ + K D W A+++ +HG
Sbjct: 467 SLTVKTTFDKDIVVTNALIDMYAKCGSIKDA-RLVFDLMNKQDEVSWNAMISGYSMHG 523
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 169/352 (48%), Gaps = 42/352 (11%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+++Y D L +A +LFD +P+RN + LI+ YA + + AIEL+ RL G +
Sbjct: 79 LLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELN 138
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
F F LK ++ E G IH + + E++ FVG ALID Y+ C V AR+VFD
Sbjct: 139 PFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFD 198
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
IL +D P+ T +V A + A
Sbjct: 199 GILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDV 258
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G+ +HG + + R+EL++ V AL+D+Y K G + AR FE++ +K V+ W+ MI YA
Sbjct: 259 GKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQ 318
Query: 220 HGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSV 277
S +A+++F +M+ V P+ TF VL AC+ + G +++ H D V
Sbjct: 319 SDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFV 378
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+ ++D+ GR++ + L + + D W ++ GHV+L +
Sbjct: 379 SN--ALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIV-----GHVQLGD 423
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 163/386 (42%), Gaps = 62/386 (16%)
Query: 71 PDNFT---FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
P F + AL+ C G+ +H ++++ D+F L++MY K + +A
Sbjct: 33 PSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDA 92
Query: 128 RQVFDKILERDPSEATLVTVISASADIAAL-----------PQGRELHGFSWRHRFEL-- 174
++FD++ ER+ + VT+I A+ +G EL+ F + +L
Sbjct: 93 SKLFDEMPERNT--ISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLV 150
Query: 175 ----------------------NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
N V TAL+D Y+ CG V VAR +F+ + K +VSW
Sbjct: 151 SMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTG 210
Query: 213 MITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD- 270
M+T +A + +AL LF +M+ +P++ TF V AC FD G+ ++
Sbjct: 211 MVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSR 270
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
Y +D V ++DL SG +D+A ++ K D W ++ + ++
Sbjct: 271 YELDLYVG--VALLDLYTKSGDIDDARXAFEEIP-KKDVIPWSFMIAR---YAQSDQSKE 324
Query: 331 ALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAH 390
A+E ++ ++L N + A+ + A + L + I C I++ +
Sbjct: 325 AVEMFFQMR-----QALVLPNQFTFASVLQACATMEGL----NLGNQIHCHVIKIGLHSD 375
Query: 391 AFLSGDASHPNCDEIYAKLKWLEGRM 416
F+S ++YAK +E M
Sbjct: 376 VFVSNALM-----DVYAKCGRMENSM 396
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/543 (40%), Positives = 327/543 (60%), Gaps = 36/543 (6%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
H V T L+ Y++ ++NA +LFD I +++ WN +I Y ++ A+ELY ++
Sbjct: 130 HVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMM 189
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
+ + PD T + AC+ +IE GR++H + + + +++ + LID+Y+KC V
Sbjct: 190 KTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVE 249
Query: 126 NARQVFDKILERD---------------------------------PSEATLVTVISASA 152
A +F + ++D P++ T+++V+ A A
Sbjct: 250 TACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACA 309
Query: 153 DIAALPQGRELHGF-SWRHRFELNVK-VKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
+ A+ GR +H + + R + N + T+L+DMYAKCG ++ A+ +F+ + + + SW
Sbjct: 310 HLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSW 369
Query: 211 NAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
NAMI G+AMHG + A DLF KM K+ + PD ITFVG+LSACS G+ D GR F SM +
Sbjct: 370 NAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQ 429
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
DY I P ++HY CM+DLLGH G EA ++I M ++PD +W +LL +CK+H +V+L E
Sbjct: 430 DYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGE 489
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
+ LI++EP + G+YV+LSNIYA A W+ VAK+R L+ D+GIKK+ CS IE+ +
Sbjct: 490 SYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVV 549
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLA 449
H F+ GD HP EIY L+ +E M+E G+VP T V ++E + K + HSE+LA
Sbjct: 550 HEFIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 609
Query: 450 IAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
IAFGLI+T GT+L I KNL++C +CH A K ISKI +REI RD R H KDG+ SC
Sbjct: 610 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRLHLLKDGVWSCH 669
Query: 510 DYW 512
DYW
Sbjct: 670 DYW 672
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 162/313 (51%), Gaps = 43/313 (13%)
Query: 21 DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
D L A +F+ I + NL +WN + R +A N A++LY ++ +GL+P++++FPF L
Sbjct: 13 DGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLL 72
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPS 140
K+C+ A+ EG++IH V++ ++ D++V +LI MYA+ + +A +VFD+
Sbjct: 73 KSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDR------- 125
Query: 141 EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
S RH V TAL+ YA G + AR LF+
Sbjct: 126 -------------------------SSHRH-----VVSYTALITGYASRGYINNARKLFD 155
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDE 259
++ K VVSWNAMI+GY + +AL+L+ + MK V+PD T V V+SAC++ G +
Sbjct: 156 EISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIEL 215
Query: 260 GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC 319
GR S + D+ +++ ++DL G ++ AC L Q K D W L+
Sbjct: 216 GRQ-LHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGL-FQGLAKKDVISWNTLIGG- 272
Query: 320 KLHGHVKLAELAL 332
H H+ L + AL
Sbjct: 273 --HTHMNLYKEAL 283
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 148/332 (44%), Gaps = 42/332 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + + L+ LYS C + A LF + ++++ WN LI + Y+ A+ L+
Sbjct: 227 GFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLF 286
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGA----ALIDM 117
+L G P++ T L AC+ L AI+ GR IH V NK V + +LIDM
Sbjct: 287 QEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIH--VYINKRLKGVTNASSLLTSLIDM 344
Query: 118 YAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
YAKC + A+QVFD +L R S A+ G +HG + F+L K
Sbjct: 345 YAKCGDIEAAKQVFDSMLTRSLSSWN------------AMIFGFAMHGKA-NAAFDLFSK 391
Query: 178 VK--------TALVDMYAKC---GLVKVARNLFEQLREKRVVS-----WNAMITGYAMHG 221
++ V + + C G++ + R++F + + ++ + MI G
Sbjct: 392 MRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCG 451
Query: 222 HSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYT 281
+A ++ M ++PD + + +L AC + G + +++++ +P Y
Sbjct: 452 LFKEAKEMIRTMP--MEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPG--SYV 507
Query: 282 CMVDLLGHSGRLDEACD---LIMQMRVKPDPG 310
+ ++ +GR D+ L+ +K PG
Sbjct: 508 LLSNIYATAGRWDQVAKIRTLLNDKGIKKAPG 539
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/541 (39%), Positives = 319/541 (58%), Gaps = 36/541 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++ T LV +Y +A +F R+ R++ W+ ++ AYA NG A+ L+ ++
Sbjct: 97 IVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLD 156
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ P+ T L AC++L + G +H+ V ++ V VG AL+++Y KC + A
Sbjct: 157 GVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAA 216
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
+ F +I+E++ P+ T V+V+ A A I
Sbjct: 217 VEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAI 276
Query: 155 AALPQGRELHGFS--WRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
AAL QGR +H + E +V V TALV+MY+KCG + +A ++F+++ +V WN+
Sbjct: 277 AALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNS 336
Query: 213 MITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
+I A HG + KAL+LFE+M+ E +QP ITF VL ACS G+ D+GR F S + D+
Sbjct: 337 LIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDH 396
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
I P +H+ CMVDLLG +G + ++ DL++ M +P P W A L +C+ + ++ A A
Sbjct: 397 GIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWA 456
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHA 391
E L +L+P YV+LSN+YA+A W VA++R+ M K SWIEVK++ H
Sbjct: 457 AENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHE 516
Query: 392 FLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIA 451
F+SGD HP EI+A+L+ L MKEAGYVP TE V HDV+ + K M+ HSE+LA+A
Sbjct: 517 FISGDLDHPRIGEIHAELQRLTKLMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMA 576
Query: 452 FGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
F L+ TP+G+ + + KNL++C+DCH A KFISK+ REI VRD NR+H F++G CSCGDY
Sbjct: 577 FALLTTPEGSPIRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDY 636
Query: 512 W 512
W
Sbjct: 637 W 637
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 153/358 (42%), Gaps = 36/358 (10%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
++ YS + + FD +P ++ WN LI AY N ++ + +L G+ P
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
L AC+ I GR I ++ E + V AL+ MY K +A VF
Sbjct: 61 EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
++ RD P++ TLV+ + A A + L
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G +H + V V TALV++Y KCG ++ A F Q+ EK VV+W+A+ YA
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYAR 240
Query: 220 HGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE-SMVRDYHIDPSV 277
+ + A+ + +M E + P+ TFV VL AC+ +GR E + V ++ V
Sbjct: 241 NDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDV 300
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
T +V++ G L A D+ ++ D +W +L+ + HG + A E++
Sbjct: 301 YVLTALVNMYSKCGNLALAGDMFDKI-AHLDLVLWNSLIATNAQHGQTEKALELFERM 357
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/560 (38%), Positives = 321/560 (57%), Gaps = 65/560 (11%)
Query: 18 SACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFP 77
S + A ++F +I NLF++N +IR ++ + + A Y + GL+PDN TFP
Sbjct: 64 SGTSLIDYASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFP 123
Query: 78 FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA------------------ 119
F +K+C+ L I G + H +I++ +E DV+V +L+ MYA
Sbjct: 124 FLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYV 183
Query: 120 -------------KCSCVVNARQVFDKILERD---------------------------- 138
KC V +AR++FD++ E++
Sbjct: 184 DVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQ 243
Query: 139 -----PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVK 193
+E +V+VIS+ A + AL G H + ++ LN+ + TALVDMYA+CG +
Sbjct: 244 SQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSID 303
Query: 194 VARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACS 252
A +FE L E+ +SW A+I G AMHG+S ++L F M + + P ITF VLSACS
Sbjct: 304 KAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACS 363
Query: 253 RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
GGL + G FESM RD+ ++P ++HY CMVDLLG +G+L+EA +++M VKP+ VW
Sbjct: 364 HGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVW 423
Query: 313 GALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDR 372
GALL +C++H + ++ E + LI+L P +G YV+LSNIYA A WE V ++R++M +
Sbjct: 424 GALLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAK 483
Query: 373 GIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDV 432
G+KK S IE+ + H F GD+SHP D+I + + R++ AGY T D+
Sbjct: 484 GLKKPPGHSLIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFDI 543
Query: 433 ENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITV 492
+ +EK + + HSE+LAIAFG++ + GT + I KNL++C+DCH A K ISK+ RE+ V
Sbjct: 544 DEEEKESALHRHSEKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIV 603
Query: 493 RDVNRYHHFKDGICSCGDYW 512
RD NR+HHF+ G+CSC DYW
Sbjct: 604 RDRNRFHHFRQGLCSCMDYW 623
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + +L T LV +Y+ C + A +F+ +P+R+ W LI A +G E +++ +
Sbjct: 281 GMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYF 340
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN 102
++E GL P + TF L ACS +E G +I E + R+
Sbjct: 341 ATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRD 381
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 89/202 (44%), Gaps = 22/202 (10%)
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDH 241
VD + L+ A +F Q++ + +NAMI G++ + +A + + + + PD+
Sbjct: 60 VDPSSGTSLIDYASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDN 119
Query: 242 ITFVGVLSACSR-----GGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+TF ++ +C++ G G + +D ++ S+ H M G + EA
Sbjct: 120 LTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVH---MYATFGDT----EA 172
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNI---Y 353
LI Q D W +++ G V+ A +++ E N V S + Y
Sbjct: 173 ATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPE------KNLVTWSTMISGY 226
Query: 354 ARAANWEGVAKLRKLMIDRGIK 375
A+ +++ +L K++ +G++
Sbjct: 227 AQNNHFDKAVELFKVLQSQGVR 248
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/542 (41%), Positives = 307/542 (56%), Gaps = 36/542 (6%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
+P + T L+ LY+ C LH A ++FD +P + W LI AY G A+ +
Sbjct: 105 NPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAF 164
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G+ PD+FT L AC+ ++ + G + + VFV A +D+Y KC +
Sbjct: 165 ANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMA 224
Query: 126 NARQVFDKILERD----------------PSEA-----------------TLVTVISASA 152
AR+VFDK+ ++D P EA + +SA
Sbjct: 225 KAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACT 284
Query: 153 DIAALPQGRE-LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+ AL GR+ + W F N + TAL+DMYAKCG A +F+Q+R+K ++ WN
Sbjct: 285 RLGALDLGRQAIRMVDW-DEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWN 343
Query: 212 AMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
AMI G M GH A L +M K V+ + TF+G+L +C+ GL +GR +F +M +
Sbjct: 344 AMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKL 403
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
YHI P ++HY C+VDLL +G L EA LI M + + + GALL CK+H + +LAE
Sbjct: 404 YHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEH 463
Query: 331 ALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAH 390
L +LI LEP ++GNYV+LSNIY+ WE AKLR M ++G++K ACSW+E + K H
Sbjct: 464 VLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVH 523
Query: 391 AFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAI 450
F GD SHP D+IY KL L MK GY P TE V DVE++EK + + HSE+LAI
Sbjct: 524 EFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAI 583
Query: 451 AFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGD 510
AF L+ T G + +TKNL++C DCH AIK IS+IT REI VRD NR+H F+DG CSC D
Sbjct: 584 AFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCND 643
Query: 511 YW 512
YW
Sbjct: 644 YW 645
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 4/193 (2%)
Query: 138 DPSEATL-VTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
+PS T + + SAS L G +LH S + N V T+L+ +YA+CGL+ A+
Sbjct: 67 NPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQ 126
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK-MKDEVQPDHITFVGVLSACSRGG 255
+F+++ VSW A+IT Y G +A+ + + ++PD T V VL+AC+R
Sbjct: 127 RVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVA 186
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
G + + ++ I SV T VDL G + +A ++ +MR K D WGA+
Sbjct: 187 DLATGETVWRAAEQE-GIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDK-DAVAWGAM 244
Query: 316 LNSCKLHGHVKLA 328
+ +GH + A
Sbjct: 245 VGGYASNGHPREA 257
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/554 (38%), Positives = 324/554 (58%), Gaps = 44/554 (7%)
Query: 1 MGFGFHPVLATKLVHLYS---ACDCLHNAHQLFDRIPQRNL---FLWNVLIRAYAWNG-P 53
+G +P++ TK + S A D + A LF L FL+N LIRAYA G
Sbjct: 55 LGLHNNPLVLTKFASISSLIHATD--YAASFLFSAEADTRLYDAFLFNTLIRAYAQTGHS 112
Query: 54 YEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAA 113
+ A+ LY +L ++P+ FT+PF LKAC+ L + G+ +H V++ ++ D+ V
Sbjct: 113 KDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNT 172
Query: 114 LIDMYAKCSCVVN-ARQVFDKILERD---------------------------------P 139
++ MY+ C+ +N AR+VFD++ + D P
Sbjct: 173 MVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCP 232
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF 199
E T+V+++SA D+ AL G+ + + RH V+V AL+DM+AKCG + A LF
Sbjct: 233 DEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLF 292
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFD 258
+ EK +VSW ++I G AMHG +A LFE+M V PD + F+G+LSACS GL +
Sbjct: 293 RAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVE 352
Query: 259 EGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
GR +F SM++ Y + P ++HY CMVD+ +G + EA + + M ++P+P + L+++
Sbjct: 353 RGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSA 412
Query: 319 CKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
C+ HG KL E + L++ EP NYV+LSNIYA+ +WE K+R++M +G+KK
Sbjct: 413 CRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVP 472
Query: 379 ACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKA 438
+ IE+ N+ + F++GD SH EIY + + MK++GY P T V D+ ++K
Sbjct: 473 GSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKE 532
Query: 439 NMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRY 498
+ + HSE+LAIAFGL+ TP GT + I KNL++C DCH A KFISKI +REI +RD NR+
Sbjct: 533 DSLNRHSEKLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRF 592
Query: 499 HHFKDGICSCGDYW 512
HHFK G CSCGD+W
Sbjct: 593 HHFKSGQCSCGDFW 606
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/550 (40%), Positives = 329/550 (59%), Gaps = 41/550 (7%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F P A+ L+H+Y C +A + FD IP N + + Y N ++EL+
Sbjct: 125 FPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFR 184
Query: 63 RLL--EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
++ + V D A A + + +H + + +E + V ++D YAK
Sbjct: 185 AMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAK 244
Query: 121 CSC--VVNARQVFDKILERD----------------PSEA-------------------T 143
+ AR+VFD +ERD +EA
Sbjct: 245 GGSRDLEVARKVFD-TMERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVA 303
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
L V+ A A A+ G+ +H R E NV V T++VDMY+KCG V++A F +++
Sbjct: 304 LSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIK 363
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRM 262
EK ++SW+AMITGY MHG +AL++F +MK ++P++ITF+ VL+ACS GL DEGR
Sbjct: 364 EKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRY 423
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
++ +M +++ I+ V+HY CMVDLLG +G LDEA LI +M+VKPD +WGALL++C++H
Sbjct: 424 WYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIH 483
Query: 323 GHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSW 382
+V+LAE+++++L EL+ ++G YV+LSNIYA A W+ V ++R L+ R I+K S
Sbjct: 484 KNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPGYSS 543
Query: 383 IEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMIC 442
E+K K + F GD SHP EIY+ L+ L RM+EAGYVP T SV HD++ +EK + +
Sbjct: 544 FELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALR 603
Query: 443 CHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFK 502
HSE+LA+AF L+N+ + + I KNL++C DCH A+KFI+KITEREI +RD+ R+HHFK
Sbjct: 604 IHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFK 663
Query: 503 DGICSCGDYW 512
DG+CSC DYW
Sbjct: 664 DGLCSCRDYW 673
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 15/214 (7%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG + + T +V +YS C + A + F +I ++N+ W+ +I Y +G + A+E+
Sbjct: 330 MGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEI 389
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG----AALID 116
+ + GL P+ TF L ACS ++EGR + + K E + G ++D
Sbjct: 390 FTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAM---KQEFGIEAGVEHYGCMVD 446
Query: 117 MYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL-- 174
+ + C+ A + K ++ P A ++SA + + EL S + FEL
Sbjct: 447 LLGRAGCLDEAYSLI-KEMKVKPDAAIWGALLSA----CRIHKNVELAEMSVKRLFELDA 501
Query: 175 -NVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
N L ++YA+ + K + ++ +R+
Sbjct: 502 SNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRI 535
>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/546 (36%), Positives = 320/546 (58%), Gaps = 37/546 (6%)
Query: 4 GFHPVL--ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ P L AT+LV +Y+ C L +AH + D +P+RN+ W +I Y+ N A +L+
Sbjct: 65 GYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNVVSWTAMISGYSQNERPAEAWDLF 124
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEG--RRIHEDVIRNKWETDVFVGAALIDMYA 119
+L G P+ FT L +C+ I + +++H I+ +E +FVG++L+DMYA
Sbjct: 125 IMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFAIKKNFELHMFVGSSLLDMYA 184
Query: 120 KCSCVVNARQVFDKILERDP---------------------------------SEATLVT 146
+ + AR+VFD + RD ++ T
Sbjct: 185 RSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEALNLFRQLYNEGMQCNQVTFSV 244
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+++A + ++++ G+++HG R + ++ +L+DMY+KCG + +R +F+ + E+
Sbjct: 245 LLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDNMPERS 304
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VVSWNAM+ GY HG + + + LF M D+V+PD +T + VL S GGL DEG F+
Sbjct: 305 VVSWNAMLMGYGRHGMAYEVVQLFRFMCDKVKPDSVTLLAVLLGYSHGGLVDEGLDMFDH 364
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+V++ + QHY C++DLLG SG+L++A LI +M +P +WG+LL +C++H +V
Sbjct: 365 IVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQKMPFQPTRAIWGSLLGACRVHANVH 424
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
+ E +KL ++EP +AGNYVILSNIYA A W+ V +LRKLM+ + + K SW+ +
Sbjct: 425 VGEFVAQKLFDIEPENAGNYVILSNIYAAARMWKDVFRLRKLMLKKTVIKEPGRSWMILD 484
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
H F S + HP ++I K+ + +K AG+VP V HDV++++K M+ HSE
Sbjct: 485 KVIHTFHSSERFHPRKEDINVKINEIYAAIKAAGFVPDLSCVLHDVDDEQKERMLLGHSE 544
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LAI FGL++TP + + KNL+IC DCH KF+SK+ REI++RD NR+H +G C
Sbjct: 545 KLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKVYGREISLRDKNRFHLITEGAC 604
Query: 507 SCGDYW 512
+CGDYW
Sbjct: 605 TCGDYW 610
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 134/283 (47%), Gaps = 42/283 (14%)
Query: 79 ALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER- 137
A+ C A+ EGR++H ++ + +++ L+ MYA+C + +A V D + ER
Sbjct: 41 AITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERN 100
Query: 138 --------------------------------DPSEATLVTVISASADIAALPQG--REL 163
+P+E TL +V+++ + Q +++
Sbjct: 101 VVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQV 160
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
H F+ + FEL++ V ++L+DMYA+ ++ AR +F+ L + VVS+ +++GY G
Sbjct: 161 HAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLD 220
Query: 224 TKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTC 282
+AL+LF ++ +E +Q + +TF +L+A S D G+ ++R + +
Sbjct: 221 EEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRR-ELPFFMALQNS 279
Query: 283 MVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHG 323
++D+ G+L + + M P+ V W A+L HG
Sbjct: 280 LIDMYSKCGKLLYSRRVFDNM---PERSVVSWNAMLMGYGRHG 319
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/547 (38%), Positives = 320/547 (58%), Gaps = 36/547 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G G ++ T V +YS + +A +F ++P RNL WN +I NG + +L
Sbjct: 260 LGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDL 319
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
++RL+ D T L+ CS +++ G+ +H IR+ +E+++ + A++D+Y+K
Sbjct: 320 FHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSK 378
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + A VF+++ +R+ + T V++
Sbjct: 379 CGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSL 438
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-EKR 206
+ + A + +L +GR +HG +R F ++ TALVDMYAKCG + +A +F K
Sbjct: 439 VHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKD 498
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
VV WN+MITGY MHGH +A+ ++ KM +E ++P+ TF+ +LSACS L ++G F
Sbjct: 499 VVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFN 558
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
SM RD++I P +HY C+VDLL +GR +EA LI +M +P V ALL+ C+ H ++
Sbjct: 559 SMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNI 618
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
L +KL+ L+ + G Y++LSNIYA A W+ V +R LM +RG+KK+ S +E
Sbjct: 619 NLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVET 678
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
N H F +GD SHPN +EIY L+ L ++ +GYVP T V DV+ + K M+ HS
Sbjct: 679 GNWVHTFFAGDNSHPNWEEIYHFLESLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHS 738
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
ERLAIAFGL+ TP G+ + ITKNL++C DCH K+ISKI +REI VRD NR+HHF +G
Sbjct: 739 ERLAIAFGLLTTPAGSLIRITKNLRVCGDCHTVTKYISKIVKREIIVRDANRFHHFSNGE 798
Query: 506 CSCGDYW 512
CSCGDYW
Sbjct: 799 CSCGDYW 805
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 201/412 (48%), Gaps = 44/412 (10%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A ++FD +P +++ WN +I Y G ++VA +L++ + G+ P T ++AC
Sbjct: 184 AQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGG 243
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSE---- 141
+ ++ G+ +H V+ D+ V + +DMY+K + +AR VF K+ R+
Sbjct: 244 IGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAM 303
Query: 142 -----------------------------ATLVTVISASADIAALPQGRELHGFSWRHRF 172
T+V+++ + A+L G+ LHG + R F
Sbjct: 304 ISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIR-SF 362
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
E N+ + TA+VD+Y+KCG +K A +F +++++ V++W AM+ G A +GH+ AL LF +
Sbjct: 363 ESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQ 422
Query: 233 MKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHS 290
M++E + + +TFV ++ +C+ G GR + R + D + + T +VD+
Sbjct: 423 MQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFD--IVNMTALVDMYAKC 480
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHDAGNYVI 348
G+++ A + + D +W +++ +HGH A K+IE L+P+ +
Sbjct: 481 GKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSL 540
Query: 349 LSNIYARAANWEGVAKLRKLMID---RGIKKSIACSWIEVKNKAHAFLSGDA 397
LS +G++ + D R I+K AC +++ ++A F A
Sbjct: 541 LSACSHSRLVEQGISLFNSMERDHNIRPIEKHYAC-LVDLLSRAGRFEEAQA 591
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 178/395 (45%), Gaps = 41/395 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ATKLV YS L A +FD+ Q L N ++ Y +G Y +EL+ +
Sbjct: 66 VATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRN 125
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L D+ + FALKAC++ E G I + E + FVG+++I K + A+
Sbjct: 126 LEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQ 185
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+VFD + +D PS T+ ++I A I
Sbjct: 186 RVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIG 245
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L G+ +HG+ ++ V T+ VDMY+K G ++ AR +F ++ + +VSWNAMI+
Sbjct: 246 NLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMIS 305
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G +G ++ DLF ++ + D T V +L CS+ G++ +R + +
Sbjct: 306 GCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRSF--E 363
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
++ T +VDL G L +A + +M+ + + W A+L +GH AE AL
Sbjct: 364 SNLILSTAIVDLYSKCGSLKQATFVFNRMKDR-NVITWTAMLVGLAQNGH---AEDALRL 419
Query: 335 LIELEPHD-AGNYVILSNIYARAANWEGVAKLRKL 368
+++ A N V ++ A+ + + R +
Sbjct: 420 FAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSI 454
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/538 (37%), Positives = 312/538 (57%), Gaps = 35/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+H+Y C + +A +FD++P R++ W LI YA N AI L +L
Sbjct: 97 LLNSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRAR 156
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P+ FTF LKA A G ++H ++ W+ DV+VG+AL+DMYA+C + A
Sbjct: 157 FRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAI 216
Query: 129 QVFDKILERDP---------------SEATLV------------------TVISASADIA 155
VFD+++ ++ E TL+ ++ SA A I
Sbjct: 217 MVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIG 276
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL QGR +H + +L V ++ MYAK G + AR +F+++ ++ +V+WN M+T
Sbjct: 277 ALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLT 336
Query: 216 GYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
A +G +A+ FE+++ +Q + ITF+ VL+ACS GGL EG+ +F+ M++DY++
Sbjct: 337 ALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFD-MMKDYNVQ 395
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P + HY VDLLG +G L EA + +M ++P VWGALL +C++H + K+ + A +
Sbjct: 396 PEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADH 455
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
+ EL+P D G V+L NIYA W A++RK+M G+KK ACSW++++N H F++
Sbjct: 456 VFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVA 515
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
D +HP +IY + + R+K+AGYVP T V + E+ + HSE++A+AF L
Sbjct: 516 DDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFAL 575
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
IN P G + I KN++IC DCH A K++SK+ +REI VRD NR+HHF +G CSCGDYW
Sbjct: 576 INMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 137/307 (44%), Gaps = 37/307 (12%)
Query: 64 LLEIG-LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
LL G L P + + AC+ + R IH + R+ D F+ +LI MY KC
Sbjct: 50 LLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCG 109
Query: 123 CVVNARQVFDKILERD----------------PSEA-----------------TLVTVIS 149
V +AR VFDK+ RD P+EA T +++
Sbjct: 110 AVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLK 169
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A+ G ++H + ++ ++ +V V +AL+DMYA+C + +A +F++L K VS
Sbjct: 170 ATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVS 229
Query: 210 WNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WNA+I G+A L F +M ++ H T+ + SA +R G ++GR ++
Sbjct: 230 WNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLI 289
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ + T M+ + SG + +A + +M K D W +L + +G K A
Sbjct: 290 KSGQKLTAFVGNT-MLGMYAKSGSMVDARKVFDRMD-KRDLVTWNTMLTALAQYGLGKEA 347
Query: 329 ELALEKL 335
E++
Sbjct: 348 VAHFEEI 354
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/537 (39%), Positives = 306/537 (56%), Gaps = 38/537 (7%)
Query: 12 KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
L+ YS CDCL + +LFD +P+R+ +NV+I AYAWN + L+ + ++G
Sbjct: 276 SLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGF-- 333
Query: 72 DNFTFPFA--LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
D P+A L +L + G++IH ++ ++ +G ALIDMY+KC + A+
Sbjct: 334 DRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKS 393
Query: 130 VFDKILERD---------------------------------PSEATLVTVISASADIAA 156
F E+ P AT ++I AS+ +A
Sbjct: 394 NFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAM 453
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
+ GR+LH + R ++ +V + LVDMYAKCG + A F+++ E+ +SWNA+I+
Sbjct: 454 IGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISA 513
Query: 217 YAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
YA +G + A+ +FE M PD +TF+ VL+ACS GL DE +F M Y I P
Sbjct: 514 YAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISP 573
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+HY C++D LG G + ++++M K DP +W ++L+SC++HG+ +LA +A +KL
Sbjct: 574 WKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKL 633
Query: 336 IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG 395
+EP DA YVILSNIYARA WE A ++K+M DRG++K SW+E+K K ++F S
Sbjct: 634 FGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASN 693
Query: 396 DASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLI 455
D + P DEI +L L M + GY P H V+++ K + HSERLAIAF L+
Sbjct: 694 DLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALM 753
Query: 456 NTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
NTP GT + I KNL C DCH IK ISKI R+I VRD R+HHFKDG+CSCGDYW
Sbjct: 754 NTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 168/369 (45%), Gaps = 36/369 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G H + L+ Y L A ++F + ++ +N ++ + G + A++L+
Sbjct: 165 GLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLF 224
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ +FTF L + ++ + G ++H V+R+ +VFV +L+D Y+KC
Sbjct: 225 AAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKC 284
Query: 122 SCVVNARQVFDKILERDPSEATLV---------------------------------TVI 148
C+ + R++FD++ ERD ++ T++
Sbjct: 285 DCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATML 344
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
S + + + G+++H + AL+DMY+KCG++ A++ F EK +
Sbjct: 345 SVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAI 404
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SW A+ITGY +G +AL LF M+ ++PD TF ++ A S + GR +
Sbjct: 405 SWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYL 464
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+R + SV + +VD+ G LDEA +M + + W A++++ +G K
Sbjct: 465 IRSGY-KSSVFSGSVLVDMYAKCGCLDEALRTFDEMPER-NSISWNAVISAYAHYGEAKN 522
Query: 328 AELALEKLI 336
A E ++
Sbjct: 523 AIKMFEGML 531
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 42/257 (16%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
++ YS+ L A LF P RN W +++RA+A G A+ L+ +L G++PD
Sbjct: 80 ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPD 139
Query: 73 NFTFP--FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
T L C+ S +H I+ +T VFV L+D Y K + AR+V
Sbjct: 140 RVTVTTVLNLPGCTVPS-------LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRV 192
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F ++ ++D + T ++++ +A +A L
Sbjct: 193 FLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHL 252
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
G ++H R LNV V +L+D Y+KC + R LF+++ E+ VS+N +I Y
Sbjct: 253 LLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAY 312
Query: 218 AMHGHSTKALDLFEKMK 234
A + + L LF +M+
Sbjct: 313 AWNQCAATVLRLFREMQ 329
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 47/233 (20%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
LH A +FD++P +N+F N+++ AY+ +G A L+ + P
Sbjct: 59 LHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLF------------LSSPH---- 102
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD--PS 140
RN + + A +A +A +F +L P
Sbjct: 103 ------------------RNATTWTIMMRA-----HAAAGRTSDALSLFRAMLGEGVIPD 139
Query: 141 EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
T+ TV++ +P LH F+ + + +V V L+D Y K GL+ AR +F
Sbjct: 140 RVTVTTVLNLPG--CTVP---SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFL 194
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACS 252
++ +K V++NAM+ G + G T+AL LF M+ P H TF +L+ +
Sbjct: 195 EMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAA 247
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/539 (39%), Positives = 314/539 (58%), Gaps = 35/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++T L+ LYS + A L +L WN ++ Y + A+E + + E+G
Sbjct: 1035 VSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMG 1094
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D T A+KA L +++G++I I+ + D++V + ++DMY KC + NA
Sbjct: 1095 IPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNAL 1154
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
++F +I D P E T T+I AS+ +
Sbjct: 1155 ELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLT 1214
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL QG+++H + + L+ V T+LVDMY KCG V+ A +F ++ ++VV WNAM+
Sbjct: 1215 ALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLL 1274
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G A HGH +AL+LF M+ +QPD +TF+GVLSACS GLF E +F++M + Y I
Sbjct: 1275 GLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGIT 1334
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY+C+VD LG +GR+ EA ++I M K ++ ALL +C+ G + A+ +K
Sbjct: 1335 PEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADK 1394
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L+ L+P D+ YV+LSNIYA + W+ V R +M + +KK SWI+VKNK H F+
Sbjct: 1395 LLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVV 1454
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAG-YVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
D SHP IY K++ L R++E G YVP T+ DVE +EK + HSE+LAIAFG
Sbjct: 1455 DDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFG 1514
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LI+TP + + KNL++C DCH AIK ISK+T+REI +RD NR+HHF++G CSCGDYW
Sbjct: 1515 LISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 150/332 (45%), Gaps = 22/332 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF ++ LV++Y + A LFD++P+R+ LWNV+++AY N + A+
Sbjct: 746 IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRF 805
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN--------KWETDVFVGA 112
+ G PD + + S + R+ H + ++ +++F
Sbjct: 806 FSAFHRSGFXPDFSNLHCVIGGVN--SDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWN 863
Query: 113 ALIDMYAKCSCVVNARQVFDKILERDPS--EATLVTVISASADIAALPQGRELHGFSWRH 170
+ + +V A F +L TLV ++SA+ L G ++H +
Sbjct: 864 KKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKS 923
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
F V V +L++MY+K G+V A F E ++SWN MI+ YA + +A+ F
Sbjct: 924 SFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTF 983
Query: 231 EK-MKDEVQPDHITFVGVLSACSRGGLFDEGRMF-FESMVRDYHIDPSVQH----YTCMV 284
++D ++PD T VL ACS G DEG F S V Y I + + T ++
Sbjct: 984 RDLLRDGLKPDQFTLASVLRACSTG---DEGEYFTLGSQVHVYAIKCGIINDSFVSTALI 1040
Query: 285 DLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
DL G++DEA + ++ + D W A++
Sbjct: 1041 DLYSKGGKMDEA-EFLLHGKYDFDLASWNAIM 1071
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 126/309 (40%), Gaps = 39/309 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAW--NGPYEVAIE---LYYR 63
L L+ +YS C L +A Q+FD+ R+L WN ++ AYA + YE +E L+
Sbjct: 648 LTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGL 707
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
L E G T LK C ++ +H ++ +E D+FV AL+++Y K
Sbjct: 708 LREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGL 767
Query: 124 VVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL--------- 174
V AR +FDK+ ERD A L V+ A + Q L FS HR
Sbjct: 768 VGQARLLFDKMPERD---AVLWNVM-LKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHC 823
Query: 175 -----------NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
N K V Y A +F + + +WN +T + G
Sbjct: 824 VIGGVNSDVSNNRKRHAEQVKAY--------AMKMFPFDQGSNIFAWNKKLTEFLHAGQI 875
Query: 224 TKALDLFEK-MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTC 282
A+D F+ ++ + D +T V +LSA D G ++V P V
Sbjct: 876 VAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQ-IHALVIKSSFAPVVPVSNS 934
Query: 283 MVDLLGHSG 291
++++ +G
Sbjct: 935 LMNMYSKAG 943
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 47/217 (21%)
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPS 140
++ A++ ++ G+R H ++ + D ++ LI MY+KC + +ARQVFDK +RD
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDL- 677
Query: 141 EATLVTVISASADIA---------------------------------------ALPQGR 161
T ++++A A A Q
Sbjct: 678 -VTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVS 736
Query: 162 E-LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMH 220
E +HG++ + FEL++ V ALV++Y K GLV AR LF+++ E+ V WN M+ Y +
Sbjct: 737 ETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN 796
Query: 221 GHSTKALDLFEKM-KDEVQPD----HITFVGVLSACS 252
+AL F + PD H GV S S
Sbjct: 797 SFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVS 833
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/518 (42%), Positives = 307/518 (59%), Gaps = 48/518 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + L +VHLY+ C + A ++FD++PQR++ WN++I G E A +L
Sbjct: 142 LGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKL 201
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + E RN V ++I YA+
Sbjct: 202 FAEMPE----------------------------------RN-----VRSWTSMIGGYAQ 222
Query: 121 CSCVVNARQVFDKILERD-----PSEATLVTVISASADIAALPQGRELHGFSWRHRFELN 175
C +++ D LE + P+E T+V V+ A AD+ L GR +H FS R +E N
Sbjct: 223 CG---KSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKN 279
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD 235
++V L+DMY KCG ++ A +F+ + E+ VVSW+AMI G A HG + AL LF KM +
Sbjct: 280 IRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMIN 339
Query: 236 E-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLD 294
V+P+ +TF+G+L ACS G+ ++GR +F SM RDY I P ++HY CMVDL +G L
Sbjct: 340 TGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQ 399
Query: 295 EACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYA 354
EA + IM M + P+ VWGALL CK+H ++KLAE A L +L+P + G YV+LSNIYA
Sbjct: 400 EAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYA 459
Query: 355 RAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEG 414
A WE VA++RKLM DRG+KK+ S I V+ + F++GD +HP +EI+ + L
Sbjct: 460 EAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQ 519
Query: 415 RMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDD 474
RMK GYVP T V D+E D+K + HSE+LA+ FGLI T GT + I KNL++C+D
Sbjct: 520 RMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCED 579
Query: 475 CHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
CH A+K IS ++ REI VRD NR+H FK+G CSCGDYW
Sbjct: 580 CHAALKIISVVSTREIVVRDRNRFHCFKNGSCSCGDYW 617
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 154/334 (46%), Gaps = 43/334 (12%)
Query: 7 PVLATKLVHLYSAC---DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
P+ + L + S C A +F + + WN +R++A AI L+YR
Sbjct: 44 PLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYR 103
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
L E + PD++T F LKACS L + G+ +H V + ++++F+ ++ +YA C
Sbjct: 104 LREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGE 163
Query: 124 VVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALV 183
+ AR+VFDK+ +RD VI+ + IA L
Sbjct: 164 IGVARKVFDKMPQRD--------VITWNIMIARL-------------------------- 189
Query: 184 DMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHI 242
K G + A LF ++ E+ V SW +MI GYA G S +A+DLF +M+D + P+ +
Sbjct: 190 ---VKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEV 246
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
T V VL AC+ G GR + R + + +++ ++D+ G L++AC +
Sbjct: 247 TVVAVLVACADMGNLVLGRRIHDFSNRSGY-EKNIRVCNTLIDMYVKCGCLEDACRIFDN 305
Query: 303 MRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
M + W A++ HG + A K+I
Sbjct: 306 MEERTVVS-WSAMIAGLAAHGRAEDALALFNKMI 338
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/539 (39%), Positives = 314/539 (58%), Gaps = 35/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++T L+ LYS + A L +L WN ++ Y + A+E + + E+G
Sbjct: 1035 VSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMG 1094
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D T A+KA L +++G++I I+ + D++V + ++DMY KC + NA
Sbjct: 1095 IPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNAL 1154
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
++F +I D P E T T+I AS+ +
Sbjct: 1155 ELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLT 1214
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL QG+++H + + L+ V T+LVDMY KCG V+ A +F ++ ++VV WNAM+
Sbjct: 1215 ALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLL 1274
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G A HGH +AL+LF M+ +QPD +TF+GVLSACS GLF E +F++M + Y I
Sbjct: 1275 GLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGIT 1334
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY+C+VD LG +GR+ EA ++I M K ++ ALL +C+ G + A+ +K
Sbjct: 1335 PEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADK 1394
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L+ L+P D+ YV+LSNIYA + W+ V R +M + +KK SWI+VKNK H F+
Sbjct: 1395 LLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVV 1454
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAG-YVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
D SHP IY K++ L R++E G YVP T+ DVE +EK + HSE+LAIAFG
Sbjct: 1455 DDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFG 1514
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LI+TP + + KNL++C DCH AIK ISK+T+REI +RD NR+HHF++G CSCGDYW
Sbjct: 1515 LISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 150/332 (45%), Gaps = 22/332 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF ++ LV++Y + A LFD++P+R+ LWNV+++AY N + A+
Sbjct: 746 IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRF 805
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN--------KWETDVFVGA 112
+ G PD + + S + R+ H + ++ +++F
Sbjct: 806 FSAFHRSGFFPDFSNLHCVIGGVN--SDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWN 863
Query: 113 ALIDMYAKCSCVVNARQVFDKILERDPS--EATLVTVISASADIAALPQGRELHGFSWRH 170
+ + +V A F +L TLV ++SA+ L G ++H +
Sbjct: 864 KKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKS 923
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
F V V +L++MY+K G+V A F E ++SWN MI+ YA + +A+ F
Sbjct: 924 SFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTF 983
Query: 231 EK-MKDEVQPDHITFVGVLSACSRGGLFDEGRMF-FESMVRDYHIDPSVQH----YTCMV 284
++D ++PD T VL ACS G DEG F S V Y I + + T ++
Sbjct: 984 RDLLRDGLKPDQFTLASVLRACSTG---DEGEYFTLGSQVHVYAIKCGIINDSFVSTALI 1040
Query: 285 DLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
DL G++DEA + ++ + D W A++
Sbjct: 1041 DLYSKGGKMDEA-EFLLHGKYDFDLASWNAIM 1071
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 126/309 (40%), Gaps = 39/309 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAW--NGPYEVAIE---LYYR 63
L L+ +YS C L +A Q+FD+ R+L WN ++ AYA + YE +E L+
Sbjct: 648 LTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGL 707
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
L E G T LK C ++ +H ++ +E D+FV AL+++Y K
Sbjct: 708 LREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGL 767
Query: 124 VVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL--------- 174
V AR +FDK+ ERD A L V+ A + Q L FS HR
Sbjct: 768 VGQARLLFDKMPERD---AVLWNVM-LKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHC 823
Query: 175 -----------NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
N K V Y A +F + + +WN +T + G
Sbjct: 824 VIGGVNSDVSNNRKRHAEQVKAY--------AMKMFPFDQGSNIFAWNKKLTEFLHAGQI 875
Query: 224 TKALDLFEK-MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTC 282
A+D F+ ++ + D +T V +LSA D G ++V P V
Sbjct: 876 VAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQ-IHALVIKSSFAPVVPVSNS 934
Query: 283 MVDLLGHSG 291
++++ +G
Sbjct: 935 LMNMYSKAG 943
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 42/190 (22%)
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPS 140
++ A++ ++ G+R H ++ + D ++ LI MY+KC + +ARQVFDK +RD
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDL- 677
Query: 141 EATLVTVISASADIA---------------------------------------ALPQGR 161
T ++++A A A Q
Sbjct: 678 -VTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVS 736
Query: 162 E-LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMH 220
E +HG++ + FEL++ V ALV++Y K GLV AR LF+++ E+ V WN M+ Y +
Sbjct: 737 ETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN 796
Query: 221 GHSTKALDLF 230
+AL F
Sbjct: 797 SFQDEALRFF 806
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 317/522 (60%), Gaps = 35/522 (6%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +F ++ + F +N ++R + + E A+ Y + E G+ PDNFT+P LKAC+
Sbjct: 84 ACSIFRQMDELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACAR 143
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
L A+EEG ++H +++ E DVFV +LI MY KC + VF+++ ER
Sbjct: 144 LPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSAL 203
Query: 139 ---------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHR 171
E+ LV+V+SA + AL GR +HGF R+
Sbjct: 204 ITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNV 263
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
LNV V+T+L++MY KCG + LF+++ +K +S++ MI+G AMHG+ + L +F
Sbjct: 264 SGLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFT 323
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+M ++ ++PD I +VGVL+ACS GL EG F M ++ I+P++QHY CMVDL+G +
Sbjct: 324 EMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRA 383
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
G++DEA +LI M ++P+ +W +LL++ K+H +++ E+A ++L +L+ A +YV+LS
Sbjct: 384 GKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLS 443
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
N+YA+A WE VAK R M +G+ + S +EVK K H F+S DA HP + +Y L
Sbjct: 444 NMYAQAQRWEDVAKTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLY 503
Query: 411 WLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLK 470
+E ++K GY P T V DV+ +EK + HS++LAIA+ LI+T G+ + I +NL+
Sbjct: 504 QMEWQLKFEGYSPDTTQVLCDVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPIRIVRNLR 563
Query: 471 ICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+C+DCH K IS I +REITVRD +R+HHFKDG CSC DYW
Sbjct: 564 MCNDCHTYTKLISIIFDREITVRDRHRFHHFKDGACSCRDYW 605
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 4 GFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
G + ++ T L+ +Y C L+ LF ++ ++N ++V+I A +G + ++
Sbjct: 265 GLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTE 324
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYAKCS 122
+LE GL PD+ + L ACS ++EG + + + + E + ++D+ +
Sbjct: 325 MLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAG 384
Query: 123 CVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT-- 180
+ A ++ K + +P++ +++SAS L G + + F+L+ + +
Sbjct: 385 KIDEALELI-KSMPMEPNDVLWRSLLSASKVHNNLQAGE----IAAKQLFKLDSQKASDY 439
Query: 181 -ALVDMYAKC----GLVKVARNLFEQLREKR 206
L +MYA+ + K N+F + +R
Sbjct: 440 VVLSNMYAQAQRWEDVAKTRTNMFSKGLSQR 470
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVL 248
G + A ++F Q+ E +N M+ G+ ++ +AL +++M + V+PD+ T+ +L
Sbjct: 79 GSMDYACSIFRQMDELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLL 138
Query: 249 SACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPD 308
AC+R +EG M + + ++ V ++ + G G + C + QM +
Sbjct: 139 KACARLPAVEEG-MQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNER-S 196
Query: 309 PGVWGALLNS 318
W AL+ +
Sbjct: 197 VASWSALITA 206
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/582 (38%), Positives = 330/582 (56%), Gaps = 71/582 (12%)
Query: 2 GFGFHPVLATKLV-HLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
G HP+ KL+ L S + AH +FD PQ +LFL+N +I+ A++
Sbjct: 28 GLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFT 87
Query: 61 YYRLL--EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
+R L E LVP+ ++F FA K C + + EG ++ I+ E ++FV ALI MY
Sbjct: 88 KFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMY 147
Query: 119 AKCSCVVNAR-------------------------------QVFDKILERD--------- 138
VV+AR Q+FD++ E+D
Sbjct: 148 VNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMIS 207
Query: 139 ------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFEL 174
P+E TL + ++A A++ AL QGR +H + ++ ++
Sbjct: 208 GCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLAACANLVALDQGRWMHVYIKKNNIQM 267
Query: 175 NVKVKTALVDMYAKCGLVKVARNLF-EQLREKRVV-SWNAMITGYAMHGHSTKALDLFEK 232
N ++ L+DMYAKCG ++ A LF R KR V WNAMI G+A+HG S +A+++FE+
Sbjct: 268 NERLLAGLIDMYAKCGELEFASKLFNSNPRLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQ 327
Query: 233 MK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
MK ++V P+ +TFV +L+ACS G +EGR +FESM Y + P ++HY C+VDLLG +G
Sbjct: 328 MKIEKVSPNKVTFVALLNACSHGNRVEEGRYYFESMASHYRVKPELEHYGCLVDLLGRAG 387
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSN 351
RL EA ++I M + PD +WGALL++CK+H ++ E + + EL+P+ G +V+L+N
Sbjct: 388 RLKEAEEIISSMHLTPDVAIWGALLSACKIHKDAEMGERVGKIVKELDPNHLGCHVLLAN 447
Query: 352 IYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKW 411
IY+ NW LR+ + + G KK+ CS IE+ H FL GD SHP ++Y L
Sbjct: 448 IYSLTGNWNEARTLREKIAESGKKKTPGCSSIELNGMFHQFLVGDRSHPQTKQLYLFLDE 507
Query: 412 LEGRMKEAGYVPGTESVFHDV-ENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLK 470
+ ++K AGY+P + V D+ +N+++ + HSE+LAIAFGL+NT T + I KNL+
Sbjct: 508 MITKLKIAGYIPESGEVLLDIDDNEDRETALLKHSEKLAIAFGLMNTTPKTPIRIVKNLR 567
Query: 471 ICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+C DCH+AIKFISK+ +REI VRD RYHHFKDG CSC DYW
Sbjct: 568 VCSDCHLAIKFISKVYDREIIVRDRIRYHHFKDGTCSCNDYW 609
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/578 (38%), Positives = 335/578 (57%), Gaps = 73/578 (12%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL-YYRL 64
HPV A KL+ L +AC L AH+LFD+IPQ +LF++N +I+A++ + P+ L +R
Sbjct: 47 HPVSANKLLKL-AACASLSYAHKLFDQIPQPDLFIYNTMIKAHSLS-PHSCHNSLIVFRS 104
Query: 65 L--EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
L ++GL P+ ++F FA AC ++EG ++ ++ E +VFV ALI MY K
Sbjct: 105 LTQDLGLFPNRYSFVFAFSACGNGLGVQEGEQVRIHAVKVGLENNVFVVNALIGMYGKWG 164
Query: 123 CVVN-------------------------------ARQVFDKILERD------------- 138
V A+++FD + ERD
Sbjct: 165 LVGESQKVFQWAVDRDLYSWNTLIAAYVGSGNMSLAKELFDGMRERDVVSWSTIIAGYVQ 224
Query: 139 --------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
P+E TLV+ ++A +++ AL QG+ +H + + ++N ++
Sbjct: 225 VGCFMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEIKMNERL 284
Query: 179 KTALVDMYAKCGLVKVA-RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DE 236
+++DMYAKCG ++ A R FE +++V WNAMI G+AMHG +A+++FE+MK ++
Sbjct: 285 LASIIDMYAKCGEIESASRVFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEK 344
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+ P+ +TF+ +L+ACS G + +EG+++F MV DY I P ++HY CMVDLL SG L EA
Sbjct: 345 ISPNKVTFIALLNACSHGYMVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEA 404
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARA 356
D+I M + PD +WGALLN+C+++ ++ + ++P+ G +V+LSNIY+ +
Sbjct: 405 EDMISSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKGMDPNHIGCHVLLSNIYSTS 464
Query: 357 ANWEGVAKLR-KLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGR 415
W LR K I R KK CS IE+K H FL GD SHP EIY+ L + +
Sbjct: 465 GRWNEARILREKNEISRDRKKIPGCSSIELKGTFHQFLVGDQSHPQSREIYSFLDEMTTK 524
Query: 416 MKEAGYVPGTESVFHDVENDE-KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDD 474
+K AGYVP + HD++++E K + HSE+LAIAFGL+NT +GT + I KNL++C D
Sbjct: 525 LKSAGYVPELGELLHDIDDEEDKETALSVHSEKLAIAFGLMNTANGTPIRIVKNLRVCGD 584
Query: 475 CHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
CH A KFISK+ R I VRD RYHHF+DGICSC DYW
Sbjct: 585 CHQATKFISKVYNRVIIVRDRTRYHHFEDGICSCKDYW 622
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/537 (39%), Positives = 306/537 (56%), Gaps = 38/537 (7%)
Query: 12 KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
L+ YS CDCL + +LFD +P+R+ +NV+I AYAWN + L+ + ++G
Sbjct: 276 SLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGF-- 333
Query: 72 DNFTFPFA--LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
D P+A L +L + G++IH ++ ++ +G ALIDMY+KC + A+
Sbjct: 334 DRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKS 393
Query: 130 VFDKILERD---------------------------------PSEATLVTVISASADIAA 156
F E+ P AT ++I AS+ +A
Sbjct: 394 NFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAM 453
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
+ GR+LH + R ++ +V + LVDMYAKCG + A F+++ E+ +SWNA+I+
Sbjct: 454 IGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISA 513
Query: 217 YAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
YA +G + A+ +FE M PD +TF+ VL+ACS GL DE +F M Y I P
Sbjct: 514 YAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISP 573
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+HY C++D LG G + ++++M K DP +W ++L+SC++HG+ +LA +A +KL
Sbjct: 574 WKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKL 633
Query: 336 IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG 395
+EP DA YVILSNIYARA WE A ++K+M DRG++K SW+E+K K ++F S
Sbjct: 634 FGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASN 693
Query: 396 DASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLI 455
D + P DEI +L L M + GY P H V+++ K + HSERLAIAF L+
Sbjct: 694 DLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALM 753
Query: 456 NTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
NTP GT + I KNL C DCH IK ISKI R+I VRD R+HHFKDG+CSCGDYW
Sbjct: 754 NTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 168/369 (45%), Gaps = 36/369 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G H + L+ Y L A ++F + ++ +N ++ + G + A++L+
Sbjct: 165 GLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLF 224
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ +FTF L + ++ + G ++H V+R+ +VFV +L+D Y+KC
Sbjct: 225 AAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKC 284
Query: 122 SCVVNARQVFDKILERDPSEATLV---------------------------------TVI 148
C+ + R++FD++ ERD ++ T++
Sbjct: 285 DCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATML 344
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
S + + + G+++H + AL+DMY+KCG++ A++ F EK +
Sbjct: 345 SVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAI 404
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SW A+ITGY +G +AL LF M+ ++PD TF ++ A S + GR +
Sbjct: 405 SWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYL 464
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+R + SV + +VD+ G LDEA +M + + W A++++ +G K
Sbjct: 465 IRSGY-KSSVFSGSVLVDMYAKCGCLDEALRTFDEMPER-NSISWNAVISAYAHYGEAKN 522
Query: 328 AELALEKLI 336
A E ++
Sbjct: 523 AIKMFEGML 531
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 113/253 (44%), Gaps = 42/253 (16%)
Query: 17 YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTF 76
YS+ L A LF P RN W +++RA+A G A+ L+ +L G++PD T
Sbjct: 84 YSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTV 143
Query: 77 P--FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI 134
L C+ S +H I+ +T VFV L+D Y K + AR+VF ++
Sbjct: 144 TTVLNLPGCTVPS-------LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEM 196
Query: 135 LERD---------------------------------PSEATLVTVISASADIAALPQGR 161
++D + T ++++ +A +A L G
Sbjct: 197 HDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGH 256
Query: 162 ELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHG 221
++H R LNV V +L+D Y+KC + R LF+++ E+ VS+N +I YA +
Sbjct: 257 QVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQ 316
Query: 222 HSTKALDLFEKMK 234
+ L LF +M+
Sbjct: 317 CAATVLRLFREMQ 329
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 47/233 (20%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
LH A +FD++P +N+F N+++ AY+ +G A L+ + P
Sbjct: 59 LHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLF------------LSSPH---- 102
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD--PS 140
RN + + A +A +A +F +L P
Sbjct: 103 ------------------RNATTWTIMMRA-----HAAAGRTSDALSLFRAMLGEGVIPD 139
Query: 141 EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
T+ TV++ +P LH F+ + + +V V L+D Y K GL+ AR +F
Sbjct: 140 RVTVTTVLNLPG--CTVP---SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFL 194
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACS 252
++ +K V++NAM+ G + G T+AL LF M+ P H TF +L+ +
Sbjct: 195 EMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAA 247
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 18/163 (11%)
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
F LN+ ++ Y+ G + A++LF + +W M+ +A G ++ AL LF
Sbjct: 75 FSLNL-----ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFR 129
Query: 232 KMKDE-VQPDHITFVGVLS--ACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
M E V PD +T VL+ C+ L + +D V ++D
Sbjct: 130 AMLGEGVIPDRVTVTTVLNLPGCTVPSL--------HPFAIKFGLDTHVFVCNTLLDAYC 181
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG-HVKLAEL 330
G L A + ++M K D + A++ C G H + +L
Sbjct: 182 KHGLLAAARRVFLEMHDK-DAVTYNAMMMGCSKEGLHTQALQL 223
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/545 (38%), Positives = 318/545 (58%), Gaps = 38/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G GF L L+H+Y C + +A +FD IP R++ W LI YA N A+ L
Sbjct: 95 GDGF---LLNSLIHMYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLL 151
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+L P FTF LKA A G ++H ++ + DV+VG+AL+DMYA+C
Sbjct: 152 PDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARC 211
Query: 122 SCVVNARQVFDKI------------------------------LERDPSEATLVT---VI 148
+ A +VFD + ++R+ AT T V
Sbjct: 212 QQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVF 271
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A I AL QGR +H + +L V ++ MYAK G + AR +F+++ ++ +V
Sbjct: 272 SALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLV 331
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WN M+T +A +G +A+ FE++ K +Q + ITF+ VL+ACS GGL EG+ +F+ M
Sbjct: 332 TWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFD-M 390
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
++DY+++P + HY VDLLG +G L EA + +M ++P VWGALL +C++H + K+
Sbjct: 391 MKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKI 450
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
+ A + + EL+P D G V+L NIYA W+ A++RK+M G+KK ACSW+E++N
Sbjct: 451 GQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEPACSWVEIEN 510
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
H F++ D++HP +EIY + + R+K+AGYVP T+ V ++ E+ + HSE+
Sbjct: 511 SVHMFVADDSTHPKSEEIYRMWEEVNTRIKKAGYVPNTDYVLLHIKEQERETKLQYHSEK 570
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
+A+AF LIN P G + I KN++IC DCH A +++S++ +REI VRD NR+HHF +G CS
Sbjct: 571 IALAFALINMPAGATIRIMKNIRICGDCHSAFRYVSEVFKREIVVRDTNRFHHFSNGSCS 630
Query: 508 CGDYW 512
CGDYW
Sbjct: 631 CGDYW 635
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 132/311 (42%), Gaps = 46/311 (14%)
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
LL L P + + AC+ + R IH + R++ D F+ +LI MY KC
Sbjct: 53 LLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGA 112
Query: 124 VVNARQVFDKILERD---------------------------------PSEATLVTVISA 150
V +AR VFD I RD PS T + + A
Sbjct: 113 VSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKA 172
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
+ G ++H + ++ + +V V +AL+DMYA+C + +A +F+ L K VSW
Sbjct: 173 AGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSW 232
Query: 211 NAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
NA+I G+A G L F +M ++ H T+ V SA +R G ++GR M++
Sbjct: 233 NALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIK 292
Query: 270 DYHIDPSVQHYTCMV-----DLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
S Q T V + SG + +A + ++ + D W +L + +G
Sbjct: 293 ------SGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQR-DLVTWNTMLTAFAQYGL 345
Query: 325 VKLAELALEKL 335
K A E++
Sbjct: 346 GKEAVAHFEEI 356
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 13/227 (5%)
Query: 136 ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
E P+ ++I+A A L R +H R R + + +L+ MY KCG V A
Sbjct: 57 ELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDA 116
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRG 254
R++F+ + + VVSW +ITGYA + +AL L M + +P TF L A
Sbjct: 117 RHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGAC 176
Query: 255 GLFDEGRMFFESM---VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV 311
G GR E M Y++D V + ++D+ ++D A + + K +
Sbjct: 177 G----GRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVS- 231
Query: 312 WGALLNSCKLHGHVKLAELALEKLIELEPHDAG-NYVILSNIYARAA 357
W AL+ G E L K E++ + G + S++++ A
Sbjct: 232 WNALIAGFARKGD---GETTLMKFAEMQRNGFGATHFTYSSVFSALA 275
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/546 (39%), Positives = 329/546 (60%), Gaps = 35/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV-AIEL 60
G+G L TKL++L A + Q+F +P + FL+ LIR+ + + V ++
Sbjct: 39 GYGCSRFLLTKLLNLACAAGSISYTRQIFLIVPNPDSFLFTSLIRSTSKFHNFSVYSLYF 98
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
Y R++ + P N+TF +K+C+ L A+ GR IH V+ N + +DV+V AL+ Y K
Sbjct: 99 YTRMVLSNVAPSNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMSFYGK 158
Query: 121 CSCVVNARQVFDKILER---------------------------------DPSEATLVTV 147
C + NAR+VFDK+ +R +P+ AT V+V
Sbjct: 159 CGVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSV 218
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+SA A + A G +H ++ + +LNV + T+L++MY +CG V AR +F+ ++E+ V
Sbjct: 219 LSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNV 278
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V+W AMI+GY +G+ ++A++LF +M+ + + P+ ITFV VLSAC+ GL +EGR FES
Sbjct: 279 VAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGRRVFES 338
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M +Y + P V+H+ C+VD+LG +G LDEA + I ++ +P P +W A+L +CK+H +
Sbjct: 339 MREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACKMHKNFG 398
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
L E + EP + +YVILSNIYA A + V +R MI + +KK + S I++
Sbjct: 399 LGAQVAEHRLASEPGNPAHYVILSNIYALAGRMDQVEMVRDNMIRKCLKKQVGYSTIDLD 458
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
K + F GD SH +EIY L L + +EAGYV ++SV H++E +E+ + HSE
Sbjct: 459 RKTYLFSMGDKSHTETNEIYHYLDQLMRKCREAGYVTVSDSVMHELEEEEREYALGYHSE 518
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LAIAFGL+ T GT + I KNL++C+DCH AIK+IS I+ REI VRD R+HHFK+G C
Sbjct: 519 KLAIAFGLLKTSRGTVIRIVKNLRMCEDCHSAIKYISVISNREIIVRDKLRFHHFKNGSC 578
Query: 507 SCGDYW 512
SC DYW
Sbjct: 579 SCLDYW 584
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/522 (41%), Positives = 312/522 (59%), Gaps = 37/522 (7%)
Query: 28 QLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALS 87
QLFD P R+ WN +I +G A+ R+ + G+V +++T+ A L
Sbjct: 199 QLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLL 258
Query: 88 AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD--KILERDPSEA--- 142
+ GR++H V+ E D FV ++L+DMY KC + A VFD L RD + A
Sbjct: 259 LPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWST 318
Query: 143 -------------------------------TLVTVISASADIAALPQGRELHGFSWRHR 171
TL +V +A A++ + QGR++HG +
Sbjct: 319 MVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLW 378
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
++L+ + +A+VDMYAKCG ++ AR++F++ K + W +M+ YA HG A++LFE
Sbjct: 379 YKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFE 438
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+M E + P+ IT VGVLSACS GL EG ++F+ M +Y I PS++HY C+VDL G S
Sbjct: 439 RMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRS 498
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
G LD+A + I + + + VW LL++C+LH H + A+LA EKL++LE DAG+YV+LS
Sbjct: 499 GLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLS 558
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
NIYA W +LR M +R ++K SWI +KN H F++GDASHP EIYA L+
Sbjct: 559 NIYATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEIYAYLE 618
Query: 411 WLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLK 470
L R+KE GY T+ V HDVE++++ + HSE+LAIAFG+I+TP GT L I KNL+
Sbjct: 619 KLVERLKEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKNLR 678
Query: 471 ICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+C+DCH AIK+IS T REI VRD+ R+HHFKD CSC D+W
Sbjct: 679 VCEDCHEAIKYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 130/274 (47%), Gaps = 40/274 (14%)
Query: 11 TKLVHLYSACDCLHNAHQLFDR---IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+ L+ +Y C L A +FD + + F W+ ++ Y NG E A++L+ R+L
Sbjct: 283 SSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLRE 342
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ D FT AC+ + +E+GR++H V + ++ D + +A++DMYAKC + +A
Sbjct: 343 GVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDA 402
Query: 128 RQVFDK---------------------------ILER------DPSEATLVTVISASADI 154
R +FD+ + ER P+E TLV V+SA + +
Sbjct: 403 RSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHV 462
Query: 155 AALPQGRELHGFSWRHRFEL--NVKVKTALVDMYAKCGLVKVARNLFEQLR-EKRVVSWN 211
+ +G EL+ + + + +++ +VD+Y + GL+ A+N E+ + W
Sbjct: 463 GLVSEG-ELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWK 521
Query: 212 AMITGYAMHGHSTKALDLFEKMKDEVQPDHITFV 245
+++ +H H+ A EK+ Q D ++V
Sbjct: 522 TLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYV 555
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 108/272 (39%), Gaps = 44/272 (16%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG-LVPDNFTFPFALK 81
H+A +FD P R +W + I A G Y + + +L G P+ F ++
Sbjct: 61 FHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVR 120
Query: 82 ACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSE 141
C+ + +E G+R+H ++RN DV + A++DMYAKC AR+VF + ERD
Sbjct: 121 CCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERD--- 177
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
+S + I A Q ++ G + LF++
Sbjct: 178 -----AVSWNIAIGACIQSGDILG-----------------------------SMQLFDE 203
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFD-- 258
+ SWN +I+G GH+ AL +M V +H T+ L D
Sbjct: 204 SPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLG 263
Query: 259 ---EGRMFFESMVRDYHIDPSVQHYTCMVDLL 287
GR+ ++ D + S+ C LL
Sbjct: 264 RQLHGRVLIAALEGDAFVRSSLMDMYCKCGLL 295
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
LA+ +V +Y+ C L +A +FDR +N+ +W ++ +YA +G +AIEL+ R+
Sbjct: 385 LASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEK 444
Query: 69 LVPDNFTFPFALKACSALSAIEEG 92
+ P+ T L ACS + + EG
Sbjct: 445 MTPNEITLVGVLSACSHVGLVSEG 468
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/560 (38%), Positives = 320/560 (57%), Gaps = 53/560 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNA--------HQLFDRIPQRNLFLWNVLIRAYAWNGP 53
G +P++ TK S + +H A H P + FL+N LIRAY+
Sbjct: 45 GLQNNPLILTKFTSTSSNLNSIHYATSFLFPPSHTTSTPTPSYDAFLFNTLIRAYSQTRD 104
Query: 54 YEVAIELYYR-LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGA 112
+ L+YR +L G+ P+ FTFPF LK C+ + ++ G+ +H V++ +E DV V
Sbjct: 105 SKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLN 164
Query: 113 ALIDMYAKCSCVVN------ARQVFDKILERD---------------------------- 138
LI MY C + A +VFD + D
Sbjct: 165 TLIHMY----CCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQ 220
Query: 139 -----PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVK 193
P E T+V+V+SA AD+ AL G+ + + + +V++ AL+DM+AKCG V
Sbjct: 221 VMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVD 280
Query: 194 VARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACS 252
A LF Q+ + +VSW ++I G AMHG A+ LF++M ++ + PD + F+GVLSACS
Sbjct: 281 KAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACS 340
Query: 253 RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
GL D+GR +F SM R++ I P V+HY CMVDLL G + EA + + +M +P+ +W
Sbjct: 341 HSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIW 400
Query: 313 GALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDR 372
++ +C G +KL E ++LI+ EP NYV+LSNIYA+ WE K+R++M R
Sbjct: 401 RTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVREMMDMR 460
Query: 373 GIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDV 432
G+KK + IEV N+ + F++GD SH EIY + + +K+AGYVP T V D+
Sbjct: 461 GMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGREIKKAGYVPTTSQVLLDI 520
Query: 433 ENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITV 492
+ ++K + + HSE+LAIAF L+NTP GT + I KNL++C+DCH A KFISK+ REI V
Sbjct: 521 DEEDKEDALYRHSEKLAIAFALLNTPPGTSIRIVKNLRVCEDCHSATKFISKVYNREIVV 580
Query: 493 RDVNRYHHFKDGICSCGDYW 512
RD NR+HHFK+G+CSC D+W
Sbjct: 581 RDRNRFHHFKNGLCSCRDFW 600
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/516 (41%), Positives = 314/516 (60%), Gaps = 43/516 (8%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYA-WNGPYEVAIE 59
+GF + L+++YS C CL +A ++FD++ +++ W +I AYA W+ P+E AI+
Sbjct: 104 LGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHE-AIK 162
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
L+ R+ EI +++F +I+ +
Sbjct: 163 LFRRM-EIA-------------------------------------SNLFCWNIMINGHV 184
Query: 120 KCSCVVNARQVFDKILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
+ S A +F+++ + T+ +++ A + AL G+ LH + + + E++V
Sbjct: 185 EDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVA 244
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DE 236
+ TALVDMYAKCG ++ A +F+++ EK V++W A+I G AM G KAL+LF +M+ E
Sbjct: 245 LGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSE 304
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
V+PD ITFVGVL+ACS GL +EG +F SM Y I PS++HY CMVD+LG +GR+ EA
Sbjct: 305 VKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEA 364
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARA 356
DLI M + PD V LL++C++HG++ +AE A ++LIEL+P + G YV+LSNIY+
Sbjct: 365 EDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSM 424
Query: 357 ANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRM 416
NWE K+R+LM++R IKK CS IEV H F+ GD SHP EIY L + R+
Sbjct: 425 KNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRL 484
Query: 417 KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCH 476
K AGYVP V D++ EK N + HSE+LAIAFGL++T GT + + KNL++C DCH
Sbjct: 485 KSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCH 544
Query: 477 IAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
A+KFIS++ REI VRD NR+HHF G CSC D+W
Sbjct: 545 SAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 580
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 174/378 (46%), Gaps = 48/378 (12%)
Query: 7 PVLATKLVHLYSACDC--LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
P A+K+V + D L A +F++IP F N +IR Y AI Y +
Sbjct: 10 PFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLM 69
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
+ GL PD FTFP K+C L EG+++H + + +D ++ L++MY+ C C+
Sbjct: 70 MLQGLDPDRFTFPSLFKSCGVLC---EGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCL 126
Query: 125 VNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVD 184
V+AR+VFDK++ + +V+S + I A Q W E +
Sbjct: 127 VSARKVFDKMVNK--------SVVSWATMIGAYAQ--------WDLPHE--------AIK 162
Query: 185 MYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHIT 243
++ + +++A NLF WN MI G+ +AL LF +M+ V+ D +T
Sbjct: 163 LFRR---MEIASNLF---------CWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVT 210
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
+L AC+ G + G+ + + I+ V T +VD+ G ++ A + +M
Sbjct: 211 MASLLIACTHLGALELGK-WLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEM 269
Query: 304 RVKPDPGVWGALLNSCKLHGH-VKLAELALE-KLIELEPHDAGNYV-ILSNIYARAANWE 360
K D W AL+ + G +K EL E ++ E++P DA +V +L+ E
Sbjct: 270 PEK-DVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKP-DAITFVGVLAACSHAGLVNE 327
Query: 361 GVAKLRKLMIDRGIKKSI 378
G+A + GI+ SI
Sbjct: 328 GIAYFNSMPNKYGIQPSI 345
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/554 (39%), Positives = 319/554 (57%), Gaps = 54/554 (9%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFL----WNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+V YS A +LF + + N+ L W +I Y+ G A+ L+ +++ G
Sbjct: 337 MVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSG 396
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWET----------DVFVGAALIDMY 118
+P+ T L AC++L A +G IH ++N T D+ V ALIDMY
Sbjct: 397 SLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 456
Query: 119 AKCSCVVNARQVFDKIL--ERD-----------------------------------PSE 141
+KC AR +FD I ER+ P+
Sbjct: 457 SKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNA 516
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRH-RFELNVK-VKTALVDMYAKCGLVKVARNLF 199
T+ ++ A A +AA+ G+++H + RH R+E + V L+DMY+KCG V AR++F
Sbjct: 517 YTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVF 576
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFD 258
+ + +K +SW +M+TGY MHG ++ALD+F+KM K PD ITF+ VL ACS G+ D
Sbjct: 577 DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVD 636
Query: 259 EGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
+G +F+SM DY + P +HY C +DLL SGRLD+A + M ++P VW ALL++
Sbjct: 637 QGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSA 696
Query: 319 CKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
C++H +V+LAE AL KL+E+ + G+Y ++SNIYA A W+ VA++R LM GIKK
Sbjct: 697 CRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRP 756
Query: 379 ACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKA 438
CSW++ + +F GD SHP +IYA L+ L R+K GYVP T HDV+ +EK
Sbjct: 757 GCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKN 816
Query: 439 NMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRY 498
N++ HSE+LA+A+GL+ T G + ITKNL++C DCH A +ISKI + EI VRD +R+
Sbjct: 817 NLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRF 876
Query: 499 HHFKDGICSCGDYW 512
HHFK+G CSCG YW
Sbjct: 877 HHFKNGSCSCGGYW 890
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 144/303 (47%), Gaps = 43/303 (14%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T +V Y AC A + +R+ WN+LIR + G + AI + R+L G
Sbjct: 91 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 150
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
PD+FT P LKAC L + G H + N +E++VF+ AL+ MY++C + A
Sbjct: 151 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 210
Query: 129 QVFDKILERDPSEA------------------------------------------TLVT 146
+FD+I +R + ++V
Sbjct: 211 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 270
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ A + A+PQ +E+HG + R+ +V V AL+D YAKCGL++ A +F + K
Sbjct: 271 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 330
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFE 265
VVSWNAM+ GY+ G+ A +LF+ M+ E P D +T+ V++ S+ G E F
Sbjct: 331 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 390
Query: 266 SMV 268
M+
Sbjct: 391 QMI 393
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 130/273 (47%), Gaps = 51/273 (18%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQR---NLFLWNVLIRAYAWNGPYEVAI 58
GF + + LV +YS C L A +FD I QR ++ WN ++ A+ + A+
Sbjct: 185 GFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTAL 244
Query: 59 ELYYRL-LEIGLVPDN-----FTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGA 112
+L+ ++ L + P N + L AC +L A+ + + +H + IRN DVFVG
Sbjct: 245 DLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGN 304
Query: 113 ALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
ALID YAKC + NA +VF+ + +D SW
Sbjct: 305 ALIDAYAKCGLMENAVKVFNMMEFKDV--------------------------VSW---- 334
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR----VVSWNAMITGYAMHGHSTKALD 228
A+V Y++ G + A LF+ +R++ VV+W A+I GY+ G S +AL+
Sbjct: 335 -------NAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALN 387
Query: 229 LFEKMK-DEVQPDHITFVGVLSACSRGGLFDEG 260
LF +M P+ +T + VLSAC+ G F +G
Sbjct: 388 LFRQMIFSGSLPNCVTIISVLSACASLGAFSQG 420
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A L+ +YS C + A +FD + Q++ W ++ Y +G A++++ ++ + G
Sbjct: 555 VANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAG 614
Query: 69 LVPDNFTFPFALKACSALSAIEEG 92
VPD+ TF L ACS +++G
Sbjct: 615 FVPDDITFLVVLYACSHCGMVDQG 638
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/573 (37%), Positives = 327/573 (57%), Gaps = 65/573 (11%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
F A+ L+ + + L A Q+F +I NLF++N IR ++ + + + Y +
Sbjct: 45 FDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQS 104
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA----- 119
GLVPDN T+PF +KAC+ +++ G + H +IR+ +++DV+V +L+ MY+
Sbjct: 105 KRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDI 164
Query: 120 --------KCSC------------------VVNARQVFDKILERD--------------- 138
+ SC V +AR++FDK+ E++
Sbjct: 165 KSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNS 224
Query: 139 ------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
+E +V+VI++ A + AL G H + R++ +N+ + T
Sbjct: 225 FFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGT 284
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQP 239
ALVDMYA+CG + A +F+QL + +SW +I G+AMHG++ KAL+ F +M K + P
Sbjct: 285 ALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTP 344
Query: 240 DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
ITF VLSACS GGL + G FESM RDY I+P ++HY CMVDLLG +G+L EA
Sbjct: 345 REITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKF 404
Query: 300 IMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANW 359
+ +M +KP+ +WGALL +C++H + ++AE A + LIEL+P +G YV+LSNIYAR W
Sbjct: 405 VNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKW 464
Query: 360 EGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEA 419
E V +R++M +RG+ K + E+ K H F GD +HP +I + + G+++ A
Sbjct: 465 ENVENIRQMMKERGVVKPPGYTLFEMDGKVHKFTIGDKTHPEIQQIERMWEEILGKIRLA 524
Query: 420 GYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAI 479
GY + D++ +EK + I HSE+LAIA+ ++ T + I KNL++C+DCH A
Sbjct: 525 GYTGNNDDALFDIDEEEKESNIHRHSEKLAIAYAIMRTKGHDPIRIVKNLRVCEDCHTAT 584
Query: 480 KFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
K ISK+ ERE+ VRD NR+HHFK G CSC DYW
Sbjct: 585 KLISKVYERELIVRDRNRFHHFKGGACSCMDYW 617
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/538 (39%), Positives = 306/538 (56%), Gaps = 38/538 (7%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
L+ YS CDCL + +LFD +P+R+ +NV+I AYAWN + L+ + ++G
Sbjct: 473 NSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGF- 531
Query: 71 PDNFTFPFA--LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
D P+A L +L + G++IH ++ ++ +G ALIDMY+KC + A+
Sbjct: 532 -DRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAK 590
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
F E+ P AT ++I AS+ +A
Sbjct: 591 SNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLA 650
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+ GR+LH + R ++ +V + LVDMYAKCG + A F+++ E+ +SWNA+I+
Sbjct: 651 MIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVIS 710
Query: 216 GYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
YA +G + A+ +FE M PD +TF+ VL+ACS GL DE +F M Y I
Sbjct: 711 AYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSIS 770
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P +HY C++D LG G + ++++M K DP +W ++L+SC++HG+ +LA +A +K
Sbjct: 771 PWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADK 830
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L +EP DA YVILSNIYARA WE A ++K+M DRG++K SW+E+K K ++F S
Sbjct: 831 LFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFAS 890
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
D + P DEI +L L M + GY P H V+++ K + HSERLAIAF L
Sbjct: 891 NDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFAL 950
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+NTP GT + I KNL C DCH IK ISKI R+I VRD R+HHFKDG+CSCGDYW
Sbjct: 951 MNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 1008
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 110/241 (45%), Gaps = 26/241 (10%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
++ YS+ L A LF P RN W +++RA+A G A+ L+ +L G++PD
Sbjct: 294 ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPD 353
Query: 73 NFTFP--FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
T L C+ S +H I+ +T VFV L+D Y K + AR+V
Sbjct: 354 RVTVTTVLNLPGCTVPS-------LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRV 406
Query: 131 FDKILERDPSEATLVTV--------ISASADIAALPQG----RELHGFSWRHRFE----- 173
F ++ ++D + + A AA+ + LH + H
Sbjct: 407 FLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHSRSRSTSV 466
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
LNV V +L+D Y+KC + R LF+++ E+ VS+N +I YA + + L LF +M
Sbjct: 467 LNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREM 526
Query: 234 K 234
+
Sbjct: 527 Q 527
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
F LN+ ++ Y+ G + A++LF + +W M+ +A G ++ AL LF
Sbjct: 289 FSLNL-----ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFR 343
Query: 232 KMKDE-VQPDHITFVGVLS 249
M E V PD +T VL+
Sbjct: 344 AMLGEGVIPDRVTVTTVLN 362
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/554 (39%), Positives = 319/554 (57%), Gaps = 54/554 (9%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFL----WNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+V YS A +LF + + N+ L W +I Y+ G A+ L+ +++ G
Sbjct: 344 MVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSG 403
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWET----------DVFVGAALIDMY 118
+P+ T L AC++L A +G IH ++N T D+ V ALIDMY
Sbjct: 404 SLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 463
Query: 119 AKCSCVVNARQVFDKIL--ERD-----------------------------------PSE 141
+KC AR +FD I ER+ P+
Sbjct: 464 SKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNA 523
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRH-RFELNVK-VKTALVDMYAKCGLVKVARNLF 199
T+ ++ A A +AA+ G+++H + RH R+E + V L+DMY+KCG V AR++F
Sbjct: 524 YTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVF 583
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFD 258
+ + +K +SW +M+TGY MHG ++ALD+F+KM K PD ITF+ VL ACS G+ D
Sbjct: 584 DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVD 643
Query: 259 EGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
+G +F+SM DY + P +HY C +DLL SGRLD+A + M ++P VW ALL++
Sbjct: 644 QGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSA 703
Query: 319 CKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
C++H +V+LAE AL KL+E+ + G+Y ++SNIYA A W+ VA++R LM GIKK
Sbjct: 704 CRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRP 763
Query: 379 ACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKA 438
CSW++ + +F GD SHP +IYA L+ L R+K GYVP T HDV+ +EK
Sbjct: 764 GCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKN 823
Query: 439 NMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRY 498
N++ HSE+LA+A+GL+ T G + ITKNL++C DCH A +ISKI + EI VRD +R+
Sbjct: 824 NLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRF 883
Query: 499 HHFKDGICSCGDYW 512
HHFK+G CSCG YW
Sbjct: 884 HHFKNGSCSCGGYW 897
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 144/303 (47%), Gaps = 43/303 (14%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T +V Y AC A + +R+ WN+LIR + G + AI + R+L G
Sbjct: 98 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 157
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
PD+FT P LKAC L + G H + N +E++VF+ AL+ MY++C + A
Sbjct: 158 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 217
Query: 129 QVFDKILERDPSEA------------------------------------------TLVT 146
+FD+I +R + ++V
Sbjct: 218 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 277
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ A + A+PQ +E+HG + R+ +V V AL+D YAKCGL++ A +F + K
Sbjct: 278 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 337
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFE 265
VVSWNAM+ GY+ G+ A +LF+ M+ E P D +T+ V++ S+ G E F
Sbjct: 338 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 397
Query: 266 SMV 268
M+
Sbjct: 398 QMI 400
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 130/273 (47%), Gaps = 51/273 (18%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQR---NLFLWNVLIRAYAWNGPYEVAI 58
GF + + LV +YS C L A +FD I QR ++ WN ++ A+ + A+
Sbjct: 192 GFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTAL 251
Query: 59 ELYYRL-LEIGLVPDN-----FTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGA 112
+L+ ++ L + P N + L AC +L A+ + + +H + IRN DVFVG
Sbjct: 252 DLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGN 311
Query: 113 ALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
ALID YAKC + NA +VF+ + +D SW
Sbjct: 312 ALIDAYAKCGLMENAVKVFNMMEFKDV--------------------------VSW---- 341
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR----VVSWNAMITGYAMHGHSTKALD 228
A+V Y++ G + A LF+ +R++ VV+W A+I GY+ G S +AL+
Sbjct: 342 -------NAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALN 394
Query: 229 LFEKMK-DEVQPDHITFVGVLSACSRGGLFDEG 260
LF +M P+ +T + VLSAC+ G F +G
Sbjct: 395 LFRQMIFSGSLPNCVTIISVLSACASLGAFSQG 427
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A L+ +YS C + A +FD + Q++ W ++ Y +G A++++ ++ + G
Sbjct: 562 VANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAG 621
Query: 69 LVPDNFTFPFALKACSALSAIEEG 92
VPD+ TF L ACS +++G
Sbjct: 622 FVPDDITFLVVLYACSHCGMVDQG 645
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/545 (40%), Positives = 316/545 (57%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + T +V YS C L +A ++FD + +N+ W +I G + A++L+
Sbjct: 134 GFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLF 193
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
LLE GL PD F L+AC+ L +E GR I + +VFV +L+DMY KC
Sbjct: 194 RGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKC 253
Query: 122 SCVVNARQVFDKILERD----------------PSEA-----------------TLVTVI 148
+ AR VFD ++E+D P EA +V +
Sbjct: 254 GSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGAL 313
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
S+ A + AL G G F N + T+L+D YAKCG ++ A +++ ++EK V
Sbjct: 314 SSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRV 373
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+NA+I+G AM+G A +F +M K + P+ TFVG+L C+ GL D+GR +F SM
Sbjct: 374 VFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSM 433
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
D+ + P+++HY CMVDLL +G LDEA +LI M +K + VWG+LL C+LH +L
Sbjct: 434 SHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQL 493
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE L++LIELEP ++G+YV+LSNIY+ + W+ K+R + ++G++K SW+EV
Sbjct: 494 AEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDG 553
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
H FL GD SHP +IY KL+ L +KEAGY P TE V DVE +EK + + CHSE+
Sbjct: 554 VVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEEKEHFLGCHSEK 613
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+AF LI+T + + KNL++C DCH AIK ISK+T REI +RD NR+H F DG CS
Sbjct: 614 LAVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRDNNRFHCFSDGACS 673
Query: 508 CGDYW 512
C DYW
Sbjct: 674 CRDYW 678
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 166/340 (48%), Gaps = 47/340 (13%)
Query: 29 LFDRIP-QRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALS 87
+F + P N FL+N +IR + A+ LY + + +VPD+FTF F LKAC+ L+
Sbjct: 59 VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118
Query: 88 AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD--------- 138
G IH V + ++ DVFV ++ Y+KC + +A +VFD ++ ++
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMIC 178
Query: 139 ------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFEL 174
P +V V+ A A + L GR +
Sbjct: 179 GCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSR 238
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM- 233
NV V T+LVDMY KCG ++ AR +F+ + EK +V W+AMI GYA +G +A++LF +M
Sbjct: 239 NVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMR 298
Query: 234 KDEVQPDHITFVGVLSACSRGGLFD-----EGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
K V+PD VG LS+C+ G + +G M +E + +P + T ++D
Sbjct: 299 KVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLS----NPVLG--TSLIDFYA 352
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
G ++EA + M+ K D V+ A+++ ++G V A
Sbjct: 353 KCGSMEEALGVYKMMKEK-DRVVFNAVISGLAMYGQVGAA 391
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 124/282 (43%), Gaps = 24/282 (8%)
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P T V+ A A + G +H ++ F+ +V VKT +V Y+KCG ++ A +
Sbjct: 102 PDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKV 161
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLF 257
F+ + K VVSW MI G G +A+DLF + + ++PD V VL AC+R G
Sbjct: 162 FDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDL 221
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
+ GR + + +R+ + +V T +VD+ G ++EA + V+ D W A++
Sbjct: 222 ESGR-WIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEA-RFVFDGMVEKDIVCWSAMIQ 279
Query: 318 SCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKS 377
+G L A+E E+ + + + YA A L L +
Sbjct: 280 GYASNG---LPREAIELFFEMRKVN-----VRPDCYAMVGALSSCASLGALELG------ 325
Query: 378 IACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEA 419
+W + FLS + + YAK G M+EA
Sbjct: 326 ---NWAKGLMNYEEFLSNPVLGTSLIDFYAKC----GSMEEA 360
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 77/184 (41%), Gaps = 8/184 (4%)
Query: 210 WNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
+N MI G A+ L+ M K + PD TF VL AC+R LF G M S+V
Sbjct: 72 YNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVM-IHSLV 130
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
D V T +V G L +A + M VK + W ++ C G + A
Sbjct: 131 FKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVK-NVVSWTGMICGCIEFGKFREA 189
Query: 329 ELALEKLIE--LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKS--IACSWIE 384
L+E L P D V + AR + E + + M + G+ ++ +A S ++
Sbjct: 190 VDLFRGLLESGLRP-DGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVD 248
Query: 385 VKNK 388
+ K
Sbjct: 249 MYTK 252
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/540 (39%), Positives = 310/540 (57%), Gaps = 37/540 (6%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P +AT L+ +Y+ C + A +FD +P RNL WN +I + N Y AI ++ +L
Sbjct: 235 PFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLS 294
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
+G PD + L AC+ L ++ G+++H +++ V+V +L+DMY KC +
Sbjct: 295 LG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFED 352
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISASAD 153
A ++F +RD P EA+ ++ ASA
Sbjct: 353 ATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASAS 412
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
IAAL QG +H + N ++ ++LV MY KCG + A +F + +E VV W AM
Sbjct: 413 IAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAM 472
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
IT + HG + +A+ LFE+M +E V P++ITFV VLSACS G D+G +F SM ++
Sbjct: 473 ITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHN 532
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I P ++HY CMVDLLG GRL+EAC I M +PD VWGALL +C H +V++
Sbjct: 533 IKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVA 592
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
E+L +LEP + GNY++LSNIY R E ++R+LM G++K CSWI+VKN+ F
Sbjct: 593 ERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFVF 652
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
+ D SH EIY L+ L+ +K GYV T+ + VE E+ ++ CHSE+LA+AF
Sbjct: 653 NANDRSHSRTQEIYGMLQKLKELIKRRGYVAETQFATNSVEGSEEQSL-WCHSEKLALAF 711
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
GL+ P G+ + I KNL+ C DCH +KF S+I +REI VRD+NR+H F +G CSC DYW
Sbjct: 712 GLLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDINRFHRFTNGSCSCMDYW 771
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 167/346 (48%), Gaps = 38/346 (10%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQ--RNLFLWNVLIRAYA-WNGPYEVAIELYYRLLEIGL 69
L+ LY+ C +H+ LF+ P N+ W LI + N P++ A+ + R+ G+
Sbjct: 138 LLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQ-ALTFFNRMRTTGI 196
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
P++FTF L AC+ + + EG++IH + ++ + D FV AL+DMYAKC ++ A
Sbjct: 197 YPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAEN 256
Query: 130 VFDKILERD-------------------------------PSEATLVTVISASADIAALP 158
VFD++ R+ P + ++ +V+SA A + L
Sbjct: 257 VFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLGPDQVSISSVLSACAGLVELD 316
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
G+++HG + V VK +LVDMY KCGL + A LF ++ VV+WN MI G
Sbjct: 317 FGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCF 376
Query: 219 MHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
+ +A F+ M ++ V+PD ++ + A + +G M +++ H+ S
Sbjct: 377 RCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNS- 435
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+ + +V + G G + +A + + + + + W A++ HG
Sbjct: 436 RISSSLVTMYGKCGSMLDAYQVFRETK-EHNVVCWTAMITVFHQHG 480
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/522 (40%), Positives = 319/522 (61%), Gaps = 35/522 (6%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +F +I + + F +N +IR + E A+ LY ++E G+ PD FT+PF LKACS
Sbjct: 51 ACSIFTQIDEPSSFDYNTMIRGNVNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSL 110
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPS----- 140
L ++EG ++H V + E DV V +LI+MY KC + NA VF+ + E+ +
Sbjct: 111 LGVVDEGIQVHGHVFKMGLEGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAI 170
Query: 141 -----------------------------EATLVTVISASADIAALPQGRELHGFSWRHR 171
E+TLV V+SA + + G+ +HG R+
Sbjct: 171 IGAHACVEMWNECLMLLGKMSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNI 230
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
ELNV VKT+L+DMY K G ++ +F+ + EK S+ MI+G A+HG +AL +F
Sbjct: 231 SELNVVVKTSLIDMYVKSGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFS 290
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+M +E + PD + +VGV SACS GL +EG F+SM ++ I+P+VQHY CMVDLLG
Sbjct: 291 EMIEEGLAPDDVVYVGVFSACSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRF 350
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
G L EA +LI M +KP+ +W +LL++CK+H ++++ ++A E L L +++G+Y++L+
Sbjct: 351 GMLKEAYELIKSMSIKPNDVIWRSLLSACKVHHNLEIGKIAAENLFMLNQNNSGDYLVLA 410
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
N+YA+A W+ VAK+R + +R + ++ S IE K K + F+S D S P + IY +
Sbjct: 411 NMYAKAQKWDDVAKIRTKLAERNLVQTPGFSLIEAKRKVYKFVSQDKSIPQWNIIYEMIH 470
Query: 411 WLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLK 470
+E ++K GY+P T V DV+++EK + HS++LAIAFGLI+T +G+ L IT+NL+
Sbjct: 471 QMEWQLKFEGYIPDTSQVLLDVDDEEKKERLKFHSQKLAIAFGLIHTSEGSPLRITRNLR 530
Query: 471 ICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+C DCH K+IS I EREITVRD R+HHFK+G CSC DYW
Sbjct: 531 MCSDCHTYTKYISMIYEREITVRDRLRFHHFKNGSCSCKDYW 572
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 9/185 (4%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+ T L+ +Y CL ++F + ++N + + V+I A +G + A++++ ++E
Sbjct: 236 VVKTSLIDMYVKSGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEE 295
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYAKCSCVVN 126
GL PD+ + ACS +EEG + + + +K E V ++D+ + +
Sbjct: 296 GLAPDDVVYVGVFSACSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKE 355
Query: 127 ARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK---TALV 183
A ++ K + P++ +++SA + E+ + + F LN L
Sbjct: 356 AYELI-KSMSIKPNDVIWRSLLSA----CKVHHNLEIGKIAAENLFMLNQNNSGDYLVLA 410
Query: 184 DMYAK 188
+MYAK
Sbjct: 411 NMYAK 415
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/549 (38%), Positives = 329/549 (59%), Gaps = 38/549 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P + +L+ S C + A ++F N++L+ LI + +G Y AI+LY
Sbjct: 59 GHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLY 118
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+L ++PDN+ LKAC + A+ EGR +H ++ ++ V ++++Y KC
Sbjct: 119 SRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKC 178
Query: 122 SCVVNARQVFDKILE----RD---------------------------------PSEATL 144
+ +AR+VF+++ E +D P+E T+
Sbjct: 179 GELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTI 238
Query: 145 VTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE 204
V V+SA + + AL GR +H + + ELN+ V AL++MY++CG + A+ +F+++++
Sbjct: 239 VCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKD 298
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMF 263
+ V+++N MI+G +M+G S +A++LF M ++P ++TFVGVL+ACS GGL D G
Sbjct: 299 RDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKI 358
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
F SM RDY ++P ++HY CMVDLLG GRL+EA DLI M++ PD + G LL++CK+H
Sbjct: 359 FHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHK 418
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
+++L E + L + D+G YV+LS++YA + W+ A++R M + G++K CS I
Sbjct: 419 NLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSI 478
Query: 384 EVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICC 443
EV N+ H FL GD HP + IY KL+ L ++ GY P E V D+E+ EK +
Sbjct: 479 EVNNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAI 538
Query: 444 HSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKD 503
HSERLAI +GLI+T T + + KNL++C DCH AIK I+KIT R++ VRD NR+H+F++
Sbjct: 539 HSERLAICYGLISTEPCTVIRVMKNLRVCYDCHSAIKLIAKITRRKVVVRDRNRFHYFEN 598
Query: 504 GICSCGDYW 512
G CSCGDYW
Sbjct: 599 GACSCGDYW 607
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/543 (39%), Positives = 312/543 (57%), Gaps = 33/543 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F V + L+ +YS C L+ A ++F ++ + W I AY G Y AI L+
Sbjct: 602 FSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFD 661
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+ G+ PD +T + AC+ S++++GR +H VI+N +++ V ALI+MYAKC
Sbjct: 662 EMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCG 721
Query: 123 CVVNARQVFDKILERD--------------------------------PSEATLVTVISA 150
V AR VF KI +D P + T+ V+ A
Sbjct: 722 SVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQFKPDDITMACVLPA 781
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
A +AAL +GRE+HG R + ++ V ALVDMYAKCGL+ +A+ LF+ + +K ++SW
Sbjct: 782 CAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISW 841
Query: 211 NAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
MI GY MHG +A+ F +M+ ++PD +F +L+ACS GL +EG FF SM
Sbjct: 842 TVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRN 901
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+ ++P ++HY C+VDLL G L +A I M +KPD +WG LL+ C++H VKLAE
Sbjct: 902 ECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAE 961
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
E + ELEP + YV+L+N+YA A WE V KLRK M RG K++ CSWIEV K
Sbjct: 962 KVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKF 1021
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLA 449
+ F++G++ HP I L+ L +M+ Y V + ++ EK + C HSE+ A
Sbjct: 1022 NIFVAGNSKHPQAKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSA 1081
Query: 450 IAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
+AFG++N P G + ++KN ++C DCH KF+SK T+REI +RD NR+HHFKDG+CSC
Sbjct: 1082 MAFGILNLPPGRTVRVSKNQRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCR 1141
Query: 510 DYW 512
D +
Sbjct: 1142 DAF 1144
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 183/386 (47%), Gaps = 39/386 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GFG + + L+ Y + +AH LFD + + ++ WN +I NG +E+
Sbjct: 499 LGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEI 558
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++L +G+ D T L A + + + GR +H ++ + +V L+DMY+K
Sbjct: 559 FIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSK 618
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + A +VF K+ + P T+ ++
Sbjct: 619 CGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSI 678
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A A ++L +GR++H + ++ N+ V AL++MYAKCG V+ AR +F ++ K +
Sbjct: 679 VHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDI 738
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
VSWN MI GY+ + +AL+LF M+ + +PD IT VL AC+ D+GR +
Sbjct: 739 VSWNTMIGGYSQNSLPNEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHI 798
Query: 268 VRDYHIDPSVQHYTC-MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH--GH 324
+R + S H C +VD+ G L A L+ M K D W ++ +H G+
Sbjct: 799 LRRGYF--SDLHVACALVDMYAKCGLLVLA-QLLFDMIPKKDLISWTVMIAGYGMHGFGN 855
Query: 325 VKLAELALEKLIELEPHDAGNYVILS 350
++ ++ +EP ++ VIL+
Sbjct: 856 EAISTFNEMRIAGIEPDESSFSVILN 881
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 201/426 (47%), Gaps = 44/426 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G L KLV +Y C L ++FD+I +FLWN+L+ YA G + ++ L+
Sbjct: 399 GISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLF 458
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ ++G+V + +TF LK +AL ++E +R+H V++ + ++ V +LI Y K
Sbjct: 459 KKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKF 518
Query: 122 SCVVNARQVFDKILERDPSE---------------------------------ATLVTVI 148
V +A +FD++ E D TLV+V+
Sbjct: 519 GGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVL 578
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A A+I L GR LHGF + F V L+DMY+KCG + A +F ++ + +V
Sbjct: 579 VAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIV 638
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SW + I Y G + A+ LF++M+ + V+PD T ++ AC+ D+GR +
Sbjct: 639 SWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYV 698
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+++ + ++ ++++ G ++EA + ++ VK D W ++ + L
Sbjct: 699 IKN-GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGG---YSQNSL 753
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKL---MIDRGIKKS--IACSW 382
ALE ++++ + + ++ + A + K R++ ++ RG +AC+
Sbjct: 754 PNEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACAL 813
Query: 383 IEVKNK 388
+++ K
Sbjct: 814 VDMYAK 819
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 133/298 (44%), Gaps = 41/298 (13%)
Query: 42 NVLIRAYAWNGPYEVAIELYYRL--LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDV 99
N I + G AIEL + E+GL ++ L+ C+ ++E+G+R+H +
Sbjct: 340 NAKINKFCEMGDLRNAIELLTKSKSYELGLN----SYCSVLQLCAEKKSLEDGKRVHSVI 395
Query: 100 IRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILE-------------------RDPS 140
I N D +GA L+ MY C +V R++FDKI+ R+
Sbjct: 396 ISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESV 455
Query: 141 EA--------------TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
T V+ A + + + + +HG+ + F N V +L+ Y
Sbjct: 456 SLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAY 515
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFV 245
K G V+ A NLF++L E VVSWN+MI G ++G S L++F +M V+ D T V
Sbjct: 516 FKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLV 575
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
VL A + G GR V+ + V T ++D+ G L+ A ++ ++M
Sbjct: 576 SVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNT-LLDMYSKCGNLNGATEVFVKM 632
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 100/216 (46%), Gaps = 11/216 (5%)
Query: 113 ALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
A I+ + + + NA ++ K + + +V+ A+ +L G+ +H +
Sbjct: 341 AKINKFCEMGDLRNAIELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGI 400
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
++ + LV MY CG + R +F+++ +V WN +++ YA G+ +++ LF+K
Sbjct: 401 SIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKK 460
Query: 233 M-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS- 290
M K V + TF VL + G E + V Y + T +V+ L +
Sbjct: 461 MQKLGVVGNCYTFTCVLKCFAALGKVKECK-----RVHGYVLKLGFGSNTAVVNSLIAAY 515
Query: 291 ---GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
G ++ A +L ++ +PD W +++N C ++G
Sbjct: 516 FKFGGVESAHNLFDELS-EPDVVSWNSMINGCVVNG 550
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/522 (39%), Positives = 317/522 (60%), Gaps = 35/522 (6%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +F ++ + F +N ++R + + E A+ Y + E G+ PDNFT+P LKAC+
Sbjct: 41 ACSIFRQMDEPGSFZFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACAR 100
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
L A+EEG ++H +++ E DVFV +LI MY KC + VF+++ ER
Sbjct: 101 LPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSAL 160
Query: 139 ---------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHR 171
E+ LV+V+SA + AL GR +HGF R+
Sbjct: 161 ITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNV 220
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
LNV V+T+L++MY KCG + LF+++ +K +S++ MI+G AMHG+ + L +F
Sbjct: 221 SGLNVIVETSLIEMYLKCGXLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFT 280
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+M ++ ++PD I +VGVL+ACS GL EG F M ++ I+P++QHY CMVDL+G +
Sbjct: 281 EMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRA 340
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
G++DEA +LI M ++P+ +W +LL++ K+H +++ E+A ++L +L+ A +YV+LS
Sbjct: 341 GKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLS 400
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
N+YA+A WE VA+ R M +G+ + S +EVK K H F+S DA HP + +Y L
Sbjct: 401 NMYAQAQRWEDVARTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLY 460
Query: 411 WLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLK 470
+E ++K GY P T V DV+ +EK + HS++LAIA+ LI+T G+ + I +NL+
Sbjct: 461 QMEWQLKFEGYXPDTTQVLCDVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPVRIVRNLR 520
Query: 471 ICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+C+DCH K IS I +REITVRD +R+HHFKDG CSC DYW
Sbjct: 521 MCNDCHTYTKLISIIFDREITVRDRHRFHHFKDGACSCRDYW 562
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 4 GFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
G + ++ T L+ +Y C L+ LF ++ ++N ++V+I A +G + ++
Sbjct: 222 GLNVIVETSLIEMYLKCGXLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTE 281
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYAKCS 122
+LE GL PD+ + L ACS ++EG + + + + E + ++D+ +
Sbjct: 282 MLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAG 341
Query: 123 CVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT-- 180
+ A ++ K + +P++ +++SAS L G + + F+L+ + +
Sbjct: 342 KIDEALELI-KSMPMEPNDVLWRSLLSASKVHNNLQAGE----IAAKQLFKLDSQKASDY 396
Query: 181 -ALVDMYAKC----GLVKVARNLFEQLREKR 206
L +MYA+ + + N+F + +R
Sbjct: 397 VVLSNMYAQAQRWEDVARTRTNMFSKGLSQR 427
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVL 248
G + A ++F Q+ E +N M+ G+ ++ +AL +++M + V+PD+ T+ +L
Sbjct: 36 GSMDYACSIFRQMDEPGSFZFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLL 95
Query: 249 SACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPD 308
AC+R +EG M + + ++ V ++ + G G + C + QM +
Sbjct: 96 KACARLPAVEEG-MQVHAHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNER-S 153
Query: 309 PGVWGALLNS 318
W AL+ +
Sbjct: 154 VASWSALITA 163
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/546 (39%), Positives = 319/546 (58%), Gaps = 34/546 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
M G L L+ +YS C+ + +A +F +P+R++ WN +I ++ N E A L
Sbjct: 241 MDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASL 300
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + G+ + T LK+ +AL A R+IH +++ +E D +V +LID Y K
Sbjct: 301 FPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGK 360
Query: 121 CSCVVNARQVFDK----------------------------ILERD-----PSEATLVTV 147
C V +A +VF++ LE P ++
Sbjct: 361 CGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSL 420
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
++A A ++A QG+++H + F ++ +LV+MYAKCG ++ A F ++ + +
Sbjct: 421 LNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGI 480
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSW+AMI G A HG+ +AL LF++M K V P+HIT V VL AC+ GL E + +F S
Sbjct: 481 VSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNS 540
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M + I+P +HY CM+DLLG +G+L+ A +L+ +M + + VWGALL + ++H ++
Sbjct: 541 MKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNID 600
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
L E A E L+ LEP +G +V+L+NIYA W+ VA++R+LM D +KK SW+EVK
Sbjct: 601 LGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVK 660
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
+K + F+ GD SH EIYAKL L +K+AGYVP E HDVE EK ++ HSE
Sbjct: 661 DKVYTFIVGDRSHSRSTEIYAKLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSE 720
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LA+AFGLI TP G + + KNL+IC DCH +KFISKI REI VRD NR+HHF++G C
Sbjct: 721 KLAVAFGLIATPPGAPIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSC 780
Query: 507 SCGDYW 512
SCG+YW
Sbjct: 781 SCGEYW 786
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 183/374 (48%), Gaps = 40/374 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G+ A LV +Y+ L +A +FD I + ++ WN +I + + A+EL
Sbjct: 140 LGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALEL 199
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + G+ P+ FT ALKAC+ ++ E GR++H +I+ +D F+G LIDMY+K
Sbjct: 200 LREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSK 259
Query: 121 CSCVVNARQVFDKILERDP---------------------------------SEATLVTV 147
C+ + +AR VF + ERD ++ TL TV
Sbjct: 260 CNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTV 319
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ + A + A R++H S + FE + V +L+D Y KCG V+ A +FE+ +
Sbjct: 320 LKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDL 379
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V + +++T YA G +AL L+ +M+D ++PD +L+AC+ +++G+
Sbjct: 380 VLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVH 439
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGH 324
+++ + + +V++ G +++A ++ V+ G+ W A++ HG+
Sbjct: 440 ILK-FGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVR---GIVSWSAMIGGLAQHGY 495
Query: 325 VKLAELALEKLIEL 338
K A ++++++
Sbjct: 496 GKEALQLFKQMLKV 509
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 195/449 (43%), Gaps = 84/449 (18%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF +A LV LY+ C +A LFD IP R++ WN L Y + + A+ L+
Sbjct: 40 GFDSDEFVANSLVILYAKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLF 99
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ ++ G+ P+ F+ + C+ L +GR+IH +I+ +++D F AL+DMYAK
Sbjct: 100 HDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKV 159
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +A VFD+I + D P+ TL + +
Sbjct: 160 GILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSAL 219
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A A +A GR+LH + + + L+DMY+KC + AR +F+ + E+ ++
Sbjct: 220 KACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMI 279
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSR-------------- 253
+WNA+I+G++ + +A LF M E + + T VL + +
Sbjct: 280 AWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALS 339
Query: 254 ----------------------GGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
G + D R+F ES + D + +T +V G
Sbjct: 340 LKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVL------FTSLVTAYAQDG 393
Query: 292 RLDEACDLIMQMR---VKPDPGVWGALLNSC---KLHGHVKLAELALEKLIELEPHDAGN 345
+ +EA L ++M+ +KPD V +LLN+C + K + + K + AGN
Sbjct: 394 QGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGN 453
Query: 346 YVILSNIYARAANWEGVAKLRKLMIDRGI 374
++ N+YA+ + E + + RGI
Sbjct: 454 SLV--NMYAKCGSIEDASCAFSRIPVRGI 480
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 143/286 (50%), Gaps = 38/286 (13%)
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
+G+ + F FP LKAC+ + G+++H V+ +++D FV +L+ +YAKC +
Sbjct: 4 LGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGD 63
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISASAD 153
AR +FD I +R P+E +L ++I+
Sbjct: 64 ARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTG 123
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+ QGR++HG+ + ++ + ALVDMYAK G+++ A ++F+++ + +VSWNA+
Sbjct: 124 LEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAI 183
Query: 214 ITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DY 271
I G +H + +AL+L +M K + P+ T L AC+ L + GR S+++ D
Sbjct: 184 IAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDM 243
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
D + ++D+ +D+A L+ ++ + D W A+++
Sbjct: 244 GSDSFLG--VGLIDMYSKCNSMDDA-RLVFKLMPERDMIAWNAVIS 286
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 13/189 (6%)
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF 199
+E +V+ A L G+++HG F+ + V +LV +YAKCG AR+LF
Sbjct: 9 NEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLF 68
Query: 200 EQLREKRVVSWNAMITGYA---MHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGG 255
+ + ++ VVSWNA+ + Y MHG +A+ LF M ++P+ + +++ C+ G
Sbjct: 69 DAIPDRSVVSWNALFSCYVHSDMHG---EAVSLFHDMVLSGIRPNEFSLSSMINVCT--G 123
Query: 256 LFD--EGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWG 313
L D +GR +++ D +VD+ G L++A + ++ KPD W
Sbjct: 124 LEDSVQGRKIHGYLIK-LGYDSDAFSANALVDMYAKVGILEDASSVFDEI-AKPDIVSWN 181
Query: 314 ALLNSCKLH 322
A++ C LH
Sbjct: 182 AIIAGCVLH 190
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/545 (39%), Positives = 324/545 (59%), Gaps = 41/545 (7%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+HP L L+++Y + L A LFD++P+RN+ W +I AY+ + A+ L
Sbjct: 315 GYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLL 374
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G++P+ FTF L+AC L + +++H +++ E+DVFV +ALID+Y+K
Sbjct: 375 AFMFRDGVMPNMFTFSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKM 431
Query: 122 SCVVNARQVFDKILERDP---------------------------------SEATLVTVI 148
++ A +VF +++ D ++TL +V+
Sbjct: 432 GELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVL 491
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A ++ L GR+ H + F+ ++ + AL+DMY KCG ++ A+ +F ++ +K V+
Sbjct: 492 RACTSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVI 549
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SW+ MI G A +G S +AL+LFE MK + +P+HIT +GVL ACS GL +EG +F SM
Sbjct: 550 SWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSM 609
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
Y IDP +HY CM+DLLG + +LD+ LI +M +PD W LL++C+ +V L
Sbjct: 610 NNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDL 669
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
A A +++++L+P D G YV+LSNIYA + W VA++R+ M RGI+K CSWIEV
Sbjct: 670 ATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNK 729
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ HAF+ GD SHP DEI +L R+ AGYVP T V D+E +++ + + HSE+
Sbjct: 730 QIHAFILGDKSHPQIDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEK 789
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAI FG+++ P + I KNLKIC DCH K I+++ +R I +RD RYHHF+DG+CS
Sbjct: 790 LAIVFGIMSFPKEKTIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVCS 849
Query: 508 CGDYW 512
CGDYW
Sbjct: 850 CGDYW 854
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 141/321 (43%), Gaps = 42/321 (13%)
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ D+ T+ +K C A A+ EG+R+H + N + F+ LI+MY K + + A
Sbjct: 280 GVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEA 339
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
+ +FDK+ ER+ P+ T +V+ A +
Sbjct: 340 QVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERL 399
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L Q LH + + E +V V++AL+D+Y+K G + A +F ++ V WN++I
Sbjct: 400 YDLKQ---LHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSII 456
Query: 215 TGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+A H +AL L++ M+ P D T VL AC+ L + GR ++ V
Sbjct: 457 AAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGR---QAHVHVLKF 513
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
D + ++D+ G L++A I K D W ++ +G + L L
Sbjct: 514 DQDLILNNALLDMYCKCGSLEDA-KFIFNRMAKKDVISWSTMIAGLAQNG-FSMEALNLF 571
Query: 334 KLIELEPHDAGNYVILSNIYA 354
+ ++++ + IL ++A
Sbjct: 572 ESMKVQGPKPNHITILGVLFA 592
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/569 (39%), Positives = 312/569 (54%), Gaps = 67/569 (11%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
L+H Y+ C L +++F IP+R++ WN +I A+ G E A+EL+ + +
Sbjct: 175 NSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVK 234
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN---- 126
P+ T L AC+ S E GR +H + RN+ + + A++DMY KC V +
Sbjct: 235 PNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRL 294
Query: 127 ---------------------------ARQVFDKILERD--------------------- 138
A+ +FD + +D
Sbjct: 295 FDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEAL 354
Query: 139 -------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
P E TLV+ +SA A + A+ G +H + + +LN + T+L+DM
Sbjct: 355 ELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDM 414
Query: 186 YAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITF 244
Y KCG ++ A +F + K V W+AMI G AMHGH A+ LF KM+ D+V+P+ +TF
Sbjct: 415 YCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTF 474
Query: 245 VGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
+L ACS GL +EGR FF M Y + P V+HY CMVD+LG +G L+EA +LI +M
Sbjct: 475 TNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMP 534
Query: 305 VKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAK 364
+ P VWGALL +C +H +V LAE A +LIELEP + G YV+LSNIYA+A W+ V+
Sbjct: 535 MAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSG 594
Query: 365 LRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPG 424
LRKLM D G+KK CS IEV H FL GD SHP+ +IYAKL + R++ GYVP
Sbjct: 595 LRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPN 654
Query: 425 TESVFHDV-ENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFIS 483
+ V E D K + HSE+LAIAFGLI+T + I KNL++C DCH K +S
Sbjct: 655 KSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVS 714
Query: 484 KITEREITVRDVNRYHHFKDGICSCGDYW 512
K+ +REI +RD R+HHF++G CSC DYW
Sbjct: 715 KLYDREILLRDRYRFHHFREGHCSCMDYW 743
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 191/422 (45%), Gaps = 77/422 (18%)
Query: 2 GFGFHPVLATKLVHL--YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIE 59
G F P A++L+ S L A Q+FD+IP NL+ WN LIRAYA + ++
Sbjct: 62 GLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLL 121
Query: 60 LYYRLL-EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
++ R+L + PD FTFPF +KA S L + G+ H VI+ +DVF+ +LI Y
Sbjct: 122 IFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFY 181
Query: 119 AKCSCVVNARQVFDKILERD----------------PSEA-----------------TLV 145
AKC + +VF I RD P EA T+V
Sbjct: 182 AKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMV 241
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
V+SA A + GR +H + R+R ++ + A++DMY KCG V+ A+ LF+++ EK
Sbjct: 242 GVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEK 301
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDE----------------------------- 236
+VSW M+ GYA G A +F+ M ++
Sbjct: 302 DIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQ 361
Query: 237 ----VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGR 292
+PD +T V LSAC++ G D G + ++ + + T ++D+ G
Sbjct: 362 LSKTAKPDEVTLVSTLSACAQLGAMDLGG-WIHVYIKKQGMKLNCHLTTSLIDMYCKCGD 420
Query: 293 LDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHDAGNYVILS 350
L +A ++ + D VW A++ +HGH K A K+ E ++P N V +
Sbjct: 421 LQKAL-MVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKP----NAVTFT 475
Query: 351 NI 352
NI
Sbjct: 476 NI 477
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 138/277 (49%), Gaps = 17/277 (6%)
Query: 59 ELYYRLLEIGLVPDNFTFP--FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
+++ ++L GL D F+ A S +++ +++ + + +++ LI
Sbjct: 53 QIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPH----PNLYTWNTLIR 108
Query: 117 MYAKCSCVVNARQVFDKILERDPS---EATLVTVISASADIAALPQGRELHGFSWRHRFE 173
YA S + +F ++L + P + T +I A++++ L G+ HG +
Sbjct: 109 AYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLG 168
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
+V + +L+ YAKCG + + +F + + VVSWN+MIT + G +AL+LF++M
Sbjct: 169 SDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEM 228
Query: 234 KDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGR 292
+ + V+P+ IT VGVLSAC++ F+ GR + S + I S+ M+D+ G
Sbjct: 229 ETQNVKPNGITMVGVLSACAKKSDFEFGR-WVHSYIERNRIGESLTLSNAMLDMYTKCGS 287
Query: 293 LDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+++A L +M K D W +L G+ K+ E
Sbjct: 288 VEDAKRLFDKMPEK-DIVSWTTMLV-----GYAKIGE 318
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T L+ +Y C L A +F + ++++F+W+ +I A +G + AI L+ ++ E
Sbjct: 407 LTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDK 466
Query: 69 LVPDNFTFPFALKACSALSAIEEGR 93
+ P+ TF L ACS + +EEGR
Sbjct: 467 VKPNAVTFTNILCACSHVGLVEEGR 491
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Glycine max]
Length = 1047
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/545 (38%), Positives = 314/545 (57%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF F+ +++ L+ +Y+ L +A ++F R+ ++++ W +I YA + + A+ L+
Sbjct: 503 GFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLF 562
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + G+ DN F A+ AC+ + A+ +G++IH + + D+ VG AL+ +YA+C
Sbjct: 563 KEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARC 622
Query: 122 SCVVNARQVFDKILERDP-SEATLVTVISASAD----IAALPQ----------------- 159
V +A FDKI +D S +L++ + S ++ Q
Sbjct: 623 GKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAV 682
Query: 160 -----------GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
G+++H + + +V L+ +YAKCG + A F ++ EK +
Sbjct: 683 SAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEI 742
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNAM+TGY+ HGH KAL LFE MK V P+H+TFVGVLSACS GL DEG +F+SM
Sbjct: 743 SWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSM 802
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ + P +HY C+VDLLG SG L A + +M ++PD V LL++C +H ++ +
Sbjct: 803 REVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDI 862
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E A L+ELEP D+ YV+LSN+YA W + R++M DRG+KK SWIEV N
Sbjct: 863 GEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNN 922
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
HAF +GD HPN D+IY L+ L E GY+P T S+ +D E +K HSE+
Sbjct: 923 SVHAFFAGDQKHPNVDKIYEYLRDLNELAAENGYIPQTNSLLNDAERRQKGPTQIIHSEK 982
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGL++ T + + KNL++C DCH IK++SKI++R I VRD R+HHFK GICS
Sbjct: 983 LAIAFGLLSLSSSTPIHVFKNLRVCGDCHNWIKYVSKISDRVIVVRDSYRFHHFKGGICS 1042
Query: 508 CGDYW 512
C DYW
Sbjct: 1043 CKDYW 1047
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 169/351 (48%), Gaps = 36/351 (10%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+L L+ LY C + AH+ F N+ LWNV++ AY + +++ ++
Sbjct: 408 ILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQME 467
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ P+ FT+P L+ CS+L A++ G +IH V++ ++ +V+V + LIDMYAK + +A
Sbjct: 468 GIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHA 527
Query: 128 RQVFDKILERDPSEAT---------------------------------LVTVISASADI 154
++F ++ E+D T + ISA A I
Sbjct: 528 LKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGI 587
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
AL QG+++H + + ++ V ALV +YA+CG V+ A F+++ K +SWN++I
Sbjct: 588 QALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLI 647
Query: 215 TGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+G+A GH +AL LF +M Q + TF +SA + G+ +++ H
Sbjct: 648 SGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGH- 706
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
D + ++ L G +D+A +M K + W A+L HGH
Sbjct: 707 DSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEIS-WNAMLTGYSQHGH 756
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 175/362 (48%), Gaps = 38/362 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + LV LYS A Q+F+ + QR+ +N LI + G + A+EL+
Sbjct: 301 GFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELF 360
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ L PD T L ACS++ A+ G++ H I+ +D+ + AL+D+Y KC
Sbjct: 361 KKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKC 420
Query: 122 SCVVNARQVF---------------------DKILER------------DPSEATLVTVI 148
S + A + F D + E +P++ T +++
Sbjct: 421 SDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSIL 480
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+ + A+ G ++H + F+ NV V + L+DMYAK G + A +F +L+EK VV
Sbjct: 481 RTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVV 540
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF-ES 266
SW AMI GYA H +AL+LF++M+D+ + D+I F +SAC+ ++G+ ++
Sbjct: 541 SWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQA 600
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
V Y D SV + +V L G++ +A ++ K D W +L++ GH +
Sbjct: 601 CVSGYSDDLSVGN--ALVSLYARCGKVRDAYFAFDKIFSK-DNISWNSLISGFAQSGHCE 657
Query: 327 LA 328
A
Sbjct: 658 EA 659
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 125/495 (25%), Positives = 208/495 (42%), Gaps = 97/495 (19%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MGF VL +L+ LY A L A +FD +P R L WN ++ + + L
Sbjct: 97 MGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGL 156
Query: 61 YYRLLEIGLVPDNFTFPFALKACSA----LSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
+ R+L+ + PD T+ L+ C +E +IH I + +E +FV LID
Sbjct: 157 FRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVE---KIHARTITHGYENSLFVCNPLID 213
Query: 117 MYAKCSCVVNARQVFDKILERD---------------------------------PSEAT 143
+Y K + +A++VFD + +RD P+
Sbjct: 214 LYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYI 273
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
+V+SA + G +LHG + F L V ALV +Y++ G A +F +
Sbjct: 274 FSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAML 333
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRM 262
++ VS+N++I+G + G+S KAL+LF+KM D ++PD +T +LSACS G G+
Sbjct: 334 QRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQ 393
Query: 263 F--------------FESMVRDYHIDPS----------------VQHYTCMVDLLGHSGR 292
F E + D ++ S V + M+ G
Sbjct: 394 FHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDN 453
Query: 293 LDEACDLIMQMR---VKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVIL 349
L+E+ + QM+ ++P+ + ++L +C V L E ++++
Sbjct: 454 LNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTG--------FQ 505
Query: 350 SNIYARAANWEGVAKLRK----LMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEI 405
N+Y + + AKL K L I R +K+ SW A ++G A H E
Sbjct: 506 FNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWT-------AMIAGYAQH----EK 554
Query: 406 YAKLKWLEGRMKEAG 420
+A+ L M++ G
Sbjct: 555 FAEALNLFKEMQDQG 569
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 103/257 (40%), Gaps = 52/257 (20%)
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G +LHG + F V + L+D+Y G + A +F+++ + + WN ++ +
Sbjct: 87 GWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVA 146
Query: 220 HGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRG------------------------ 254
+ + L LF +M +++V+PD T+ GVL C G
Sbjct: 147 GKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLF 206
Query: 255 ------------GLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
G + + F+ + + + + M+ L SG +EA L Q
Sbjct: 207 VCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVS-----WVAMLSGLSQSGCEEEAVLLFCQ 261
Query: 303 MR---VKPDPGVWGALLNSCKLHGHVKLAE----LALEKLIELEPHDAGNYVILSNIYAR 355
M V P P ++ ++L++C K+ E L L++ LE + V L Y+R
Sbjct: 262 MHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTL---YSR 318
Query: 356 AANWEGVAKLRKLMIDR 372
N+ ++ M+ R
Sbjct: 319 LGNFIPAEQVFNAMLQR 335
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/539 (38%), Positives = 318/539 (58%), Gaps = 35/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL-LEI 67
+ +LV +Y +A +LFD +P R+L WN L+ + G + + R+ E
Sbjct: 176 IGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTES 235
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G P+ T + AC+ + A++EG+ +H V++ V +LI+MY K + A
Sbjct: 236 GRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAA 295
Query: 128 RQVFDKILER---------------------------------DPSEATLVTVISASADI 154
Q+F+++ R +P +AT+V ++ A D
Sbjct: 296 SQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDT 355
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
Q +H + R F ++ + TAL+++YAK G + + ++FE+++++ ++W AM+
Sbjct: 356 GLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAML 415
Query: 215 TGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
GYA+H +A+ LF+ M K+ V+ DH+TF +LSACS GL +EG+ +FE M Y +
Sbjct: 416 AGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRV 475
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
+P + HY+CMVDLLG SGRL++A +LI M ++P GVWGALL +C+++G+V+L + E
Sbjct: 476 EPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAE 535
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
+L+ L+P D NY++LSNIY+ A W +K+R LM +R + ++ CS+IE NK H F+
Sbjct: 536 QLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNPGCSFIEHGNKIHRFV 595
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD HP DEI+ KL+ L ++ EAG P TE V HD++ + K +MI HSE+LAIAFG
Sbjct: 596 VGDQLHPRSDEIHTKLEELIRKIXEAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFG 655
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+ T G L+ITKNL+IC DCH KF S + +R I +RD R+HHF DG+CSC DYW
Sbjct: 656 LLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 714
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 143/319 (44%), Gaps = 16/319 (5%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + L+++Y L A QLF+ +P R+L WN ++ + NG E ++L
Sbjct: 270 LGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDL 329
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + G+ PD T L+AC+ + IH + R + D+ + AL+++YAK
Sbjct: 330 FNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAK 389
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
+ + +F++I +RD T +++ A A + +L + E++ T
Sbjct: 390 LGRLNASEDIFEEIKDRDTIAWT--AMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFT 447
Query: 181 ALVDMYAKCGLVKVARNLFEQLR-----EKRVVSWNAMITGYAMHGHSTKALDLFEKMKD 235
L+ + GLV+ + FE + E R+ ++ M+ G A +L + M
Sbjct: 448 HLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMP- 506
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV-QHYTCMVDLLGHSGRLD 294
++P + +L AC G + G+ E ++ +DPS ++Y + ++ +G
Sbjct: 507 -MEPSSGVWGALLGACRVYGNVELGKEVAEQLLS---LDPSDHRNYIMLSNIYSAAGLWR 562
Query: 295 EACD---LIMQMRVKPDPG 310
A L+ + R+ +PG
Sbjct: 563 XASKVRXLMKERRLTRNPG 581
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/543 (39%), Positives = 317/543 (58%), Gaps = 41/543 (7%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIP-QRNLFL-WNVLIRAYAWNGPYEVAIELYYRL 64
P + T L+ +Y C + +A ++FD RNL + +N LI Y+ N + A+ L+ ++
Sbjct: 91 PFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQM 150
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
+ G+ + T + C+ + G +H +R + D+ VG L+ MY +C V
Sbjct: 151 RKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSV 210
Query: 125 VNARQVFDKILERD---------------------------------PSEATLVTVISAS 151
AR++FD + E+ P TLV V+S+
Sbjct: 211 DFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSC 270
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
A + A GRE+ F N +K AL++MYA+CG + AR +F+ + EK V+SW
Sbjct: 271 AHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWT 330
Query: 212 AMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
A+I GY MHG A+ LF++M DE+ PD FV VLSACS GL ++G +F +M R
Sbjct: 331 AIIAGYGMHGQGELAVQLFDEMISSDEL-PDGAAFVSVLSACSHAGLTEKGLYYFTAMER 389
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
DY + P +HY+C+VDLLG +GRL+EA LI M V+PD VWGALL +CK+H +V+LAE
Sbjct: 390 DYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAE 449
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
LA EK+IE EP + G YV+LSNI++ A N EG+ ++R +M +R +KK CS++E + +
Sbjct: 450 LAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSYVEYQGRI 509
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLA 449
H FL+GD +HP EIY L LE +K G G+ + N+E + HSE+LA
Sbjct: 510 HLFLAGDRTHPQAQEIYHMLDGLEDIIKRRG---GSNDNDQESRNEELITGMGVHSEKLA 566
Query: 450 IAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
IAFGLINT GT + + KNL++C DCH+ +K +S+I +R++ VRD R+HHFK+G+CSC
Sbjct: 567 IAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRDATRFHHFKNGVCSCK 626
Query: 510 DYW 512
DYW
Sbjct: 627 DYW 629
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 182/380 (47%), Gaps = 42/380 (11%)
Query: 35 QRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRR 94
Q WN +R A ++ A+ LY ++L G P+ FTFPFA K+C++LS G +
Sbjct: 18 QNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQ 77
Query: 95 IHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDK--------------------- 133
+H VI+ E + FV +LI MY KCS + +AR+VFD+
Sbjct: 78 LHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLN 137
Query: 134 -------ILERD-------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
+L R + T++ +I A L G LH S R + ++ V
Sbjct: 138 SRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVG 197
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQ 238
L+ MY +CG V AR LF+ + EK +++WNAMI+GYA +G + LDL+ KM+ +
Sbjct: 198 NCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIV 257
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESM-VRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
PD +T VGVLS+C+ G GR + + + + +P +++ ++++ G L +A
Sbjct: 258 PDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKN--ALINMYARCGNLVKAR 315
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE--PHDAGNYVILSNIYAR 355
+ M K + W A++ +HG +LA +++I + P A +LS
Sbjct: 316 AIFDGMTEK-NVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHA 374
Query: 356 AANWEGVAKLRKLMIDRGIK 375
+G+ + D G++
Sbjct: 375 GLTEKGLYYFTAMERDYGLQ 394
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFGF+P L L+++Y+ C L A +FD + ++N+ W +I Y +G E+A++L+
Sbjct: 290 GFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLF 349
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
++ +PD F L ACS E+G
Sbjct: 350 DEMISSDELPDGAAFVSVLSACSHAGLTEKG 380
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/539 (39%), Positives = 318/539 (58%), Gaps = 35/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L TKL+ L + A +LF +P + FL++ L++ + G + Y R+L G
Sbjct: 61 LLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSG 120
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
N+TF +KAC+ LSA+ G+ IH V+ + +D++V AALI +YAK S + A+
Sbjct: 121 APQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAK 180
Query: 129 QVFDKILER---------------------------------DPSEATLVTVISASADIA 155
+VFD + +R P AT+V+++S+ + +
Sbjct: 181 KVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLG 240
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL G LH ++ + F+LNV + T+L++MY +CG V AR +F+ ++E+ VV+W AMI+
Sbjct: 241 ALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMIS 300
Query: 216 GYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GY MHG+ +A++LF +M+ +P++ITFV VLSAC+ GL D+GR F SM Y +
Sbjct: 301 GYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLV 360
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK-PDPGVWGALLNSCKLHGHVKLAELALE 333
P V+H CMVD+ G +G L++A I + K P P VW ++L +C++H + L E
Sbjct: 361 PGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAE 420
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
++ +EP + G+YV+LSNIYA A + V +R +M R +KK + S IE+ K + F
Sbjct: 421 HVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFS 480
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD SHP + IY L L R E+GYVP ES+ HD+E +E+ + HSE+LA+AFG
Sbjct: 481 MGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFG 540
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+ T G + I KNL+IC+DCH AIK IS I +REI VRD R+HHFKDG CSC DYW
Sbjct: 541 LLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 599
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 154/327 (47%), Gaps = 33/327 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+G + L+ LY+ + A ++FD +PQR + WN LI Y NG + +I L+
Sbjct: 155 GYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLF 214
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ ++E G PD+ T L +CS L A++ G +H+ N ++ +V +G +LI+MY +C
Sbjct: 215 HLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRC 274
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK-- 179
V AR+VFD + ER+ V++ +A I+ G +HG+ R EL +++
Sbjct: 275 GNVSKAREVFDSMKERN--------VVTWTAMIS----GYGMHGYG-RQAMELFTEMRAY 321
Query: 180 ---------TALVDMYAKCGLVKVARNLFEQLREKR--VVSWNAMITGYAMHGHSTKALD 228
A++ A GL+ R +F ++E V + M G + D
Sbjct: 322 GPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLND 381
Query: 229 LFEKMKDEV--QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDL 286
++ +K + +P + +L AC FD G E ++ +P HY + ++
Sbjct: 382 AYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPG--HYVMLSNI 439
Query: 287 LGHSGRLDE---ACDLIMQMRVKPDPG 310
+GR+D +++ + R+K G
Sbjct: 440 YALAGRMDRVEMVRNMMTRRRLKKQVG 466
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/539 (39%), Positives = 318/539 (58%), Gaps = 35/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L TKL+ L + A +LF +P + FL++ L++ + G + Y R+L G
Sbjct: 125 LLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSG 184
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
N+TF +KAC+ LSA+ G+ IH V+ + +D++V AALI +YAK S + A+
Sbjct: 185 APQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAK 244
Query: 129 QVFDKILER---------------------------------DPSEATLVTVISASADIA 155
+VFD + +R P AT+V+++S+ + +
Sbjct: 245 KVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLG 304
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL G LH ++ + F+LNV + T+L++MY +CG V AR +F+ ++E+ VV+W AMI+
Sbjct: 305 ALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMIS 364
Query: 216 GYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GY MHG+ +A++LF +M+ +P++ITFV VLSAC+ GL D+GR F SM Y +
Sbjct: 365 GYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLV 424
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK-PDPGVWGALLNSCKLHGHVKLAELALE 333
P V+H CMVD+ G +G L++A I + K P P VW ++L +C++H + L E
Sbjct: 425 PGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAE 484
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
++ +EP + G+YV+LSNIYA A + V +R +M R +KK + S IE+ K + F
Sbjct: 485 HVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFS 544
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD SHP + IY L L R E+GYVP ES+ HD+E +E+ + HSE+LA+AFG
Sbjct: 545 MGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFG 604
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+ T G + I KNL+IC+DCH AIK IS I +REI VRD R+HHFKDG CSC DYW
Sbjct: 605 LLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 663
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 154/327 (47%), Gaps = 33/327 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+G + L+ LY+ + A ++FD +PQR + WN LI Y NG + +I L+
Sbjct: 219 GYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLF 278
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ ++E G PD+ T L +CS L A++ G +H+ N ++ +V +G +LI+MY +C
Sbjct: 279 HLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRC 338
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK-- 179
V AR+VFD + ER+ V++ +A I+ G +HG+ R EL +++
Sbjct: 339 GNVSKAREVFDSMKERN--------VVTWTAMIS----GYGMHGYG-RQAMELFTEMRAY 385
Query: 180 ---------TALVDMYAKCGLVKVARNLFEQLREKR--VVSWNAMITGYAMHGHSTKALD 228
A++ A GL+ R +F ++E V + M G + D
Sbjct: 386 GPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLND 445
Query: 229 LFEKMKDEV--QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDL 286
++ +K + +P + +L AC FD G E ++ +P HY + ++
Sbjct: 446 AYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPG--HYVMLSNI 503
Query: 287 LGHSGRLDE---ACDLIMQMRVKPDPG 310
+GR+D +++ + R+K G
Sbjct: 504 YALAGRMDRVEMVRNMMTRRRLKKQVG 530
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/543 (39%), Positives = 312/543 (57%), Gaps = 33/543 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F V + L+ +YS C L+ A ++F ++ + W +I AY G Y AI L+
Sbjct: 327 FSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFD 386
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+ G+ PD +T + AC+ S++++GR +H VI+N +++ V ALI+MYAKC
Sbjct: 387 EMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCG 446
Query: 123 CVVNARQVFDKILERD--------------------------------PSEATLVTVISA 150
V AR VF KI +D P + T+ V+ A
Sbjct: 447 SVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQFKPDDITMACVLPA 506
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
A +AAL +GRE+HG R + ++ V ALVDMYAKCGL+ +A+ LF+ + +K ++SW
Sbjct: 507 CAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISW 566
Query: 211 NAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
MI GY MHG +A+ F +M+ ++PD +F +L+ACS GL +EG FF SM
Sbjct: 567 TVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRN 626
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+ ++P ++HY C+VDLL G L +A I M +KPD +WG LL+ C++H VKLAE
Sbjct: 627 ECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAE 686
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
E + ELEP + YV+L+N+YA A WE V KLRK M RG K++ CSWIEV K
Sbjct: 687 KVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKF 746
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLA 449
+ F++G++ HP +I L L +M+ Y V + ++ EK + C HSE+ A
Sbjct: 747 NIFVAGNSKHPQAKKIDVLLSKLTMQMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSA 806
Query: 450 IAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
+AFG++N P G + ++KN ++C DCH KF+SK T+ EI +RD NR+HHFKDG+CSC
Sbjct: 807 MAFGILNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCR 866
Query: 510 DYW 512
D +
Sbjct: 867 DAF 869
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 183/386 (47%), Gaps = 39/386 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GFG + + L+ Y + +AH LFD + + ++ WN +I NG +E+
Sbjct: 224 LGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEI 283
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++L +G+ D T L AC+ + + GR +H ++ + +V L+DMY+K
Sbjct: 284 FIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSK 343
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + A +VF K+ + P T+ ++
Sbjct: 344 CGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSI 403
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A A ++L +GR++H + ++ N+ V AL++MYAKCG V+ AR +F ++ K +
Sbjct: 404 VHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDI 463
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
VSWN MI GY+ + +AL+LF M+ + +PD IT VL AC+ D+GR +
Sbjct: 464 VSWNTMIGGYSQNLLPNEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHI 523
Query: 268 VRDYHIDPSVQHYTC-MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH--GH 324
+R + S H C +VD+ G L A L+ M K D W ++ +H G+
Sbjct: 524 LRRGYF--SDLHVACALVDMYAKCGLLVLA-QLLFDMIPKKDLISWTVMIAGYGMHGFGN 580
Query: 325 VKLAELALEKLIELEPHDAGNYVILS 350
++ ++ +EP ++ IL+
Sbjct: 581 EAISTFNEMRIAGIEPDESSFSAILN 606
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 202/426 (47%), Gaps = 44/426 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G L KLV +Y C L ++FD+I +FLWN+L+ YA G + ++ L+
Sbjct: 124 GISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLF 183
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ ++G+V + +TF LK +AL ++E +R+H V++ + ++ V +LI Y K
Sbjct: 184 KKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKF 243
Query: 122 SCVVNARQVFDKILERDPSE---------------------------------ATLVTVI 148
V +A +FD++ E D TLV+V+
Sbjct: 244 GGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVL 303
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A A+I L GR LHGF + F V L+DMY+KCG + A +F ++ + +V
Sbjct: 304 VACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIV 363
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SW ++I Y G + A+ LF++M+ + V+PD T ++ AC+ D+GR +
Sbjct: 364 SWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYV 423
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+++ + ++ ++++ G ++EA + ++ VK D W ++ + L
Sbjct: 424 IKN-GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGG---YSQNLL 478
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKL---MIDRGIKKS--IACSW 382
ALE ++++ + + ++ + A + K R++ ++ RG +AC+
Sbjct: 479 PNEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACAL 538
Query: 383 IEVKNK 388
+++ K
Sbjct: 539 VDMYAK 544
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 134/298 (44%), Gaps = 41/298 (13%)
Query: 42 NVLIRAYAWNGPYEVAIELYYRL--LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDV 99
N I + G AIEL + E+GL ++ L+ C+ ++E+G+R+H +
Sbjct: 65 NAKINKFCEMGDLRNAIELLTKSKSYELGLN----SYCSVLQLCAEKKSLEDGKRVHSVI 120
Query: 100 IRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILE-------------------RDPS 140
I N D +GA L+ MY C +V R++FDKI+ R+
Sbjct: 121 ISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESV 180
Query: 141 EA--------------TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
T V+ A + + + + +HG+ + F N V +L+ Y
Sbjct: 181 SLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAY 240
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFV 245
K G V+ A NLF++L E VVSWN+MI G ++G S L++F +M V+ D T V
Sbjct: 241 FKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLV 300
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
VL AC+ G GR V+ + V T ++D+ G L+ A ++ ++M
Sbjct: 301 SVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNT-LLDMYSKCGNLNGATEVFVKM 357
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 100/216 (46%), Gaps = 11/216 (5%)
Query: 113 ALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
A I+ + + + NA ++ K + + +V+ A+ +L G+ +H +
Sbjct: 66 AKINKFCEMGDLRNAIELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGI 125
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
++ + LV MY CG + R +F+++ +V WN +++ YA G+ +++ LF+K
Sbjct: 126 SVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKK 185
Query: 233 M-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS- 290
M K V + TF VL + G E + V Y + T +V+ L +
Sbjct: 186 MQKLGVVGNCYTFTCVLKCFAALGKVKECK-----RVHGYVLKLGFGSNTAVVNSLIAAY 240
Query: 291 ---GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
G ++ A +L ++ +PD W +++N C ++G
Sbjct: 241 FKFGGVESAHNLFDELS-EPDVVSWNSMINGCVVNG 275
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/376 (51%), Positives = 263/376 (69%), Gaps = 1/376 (0%)
Query: 138 DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
+P+ T+ V+ A A++AAL GR H F+ R F +V V +ALVDMYAKCG VK AR
Sbjct: 290 EPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARI 349
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGL 256
+F+ + + VVSWNAMI GYAM+G + A+ +F M K + +PD +TF +L+AC++ GL
Sbjct: 350 IFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGL 409
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
+EGR +F+ M +Y + P ++HY CMV LLG +G+LDEA DLI M +PD +WG+LL
Sbjct: 410 TEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLL 469
Query: 317 NSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKK 376
SC++HG+V LAE+A EKL LEP +AGNYV+LSNIYA W+ V ++R++M D G+KK
Sbjct: 470 GSCRVHGNVDLAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKK 529
Query: 377 SIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDE 436
CSWIE+KNK H L+GD SHP I K+ L +M++ G+VP T+ V HDVE E
Sbjct: 530 EKGCSWIEIKNKVHMLLAGDDSHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQE 589
Query: 437 KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVN 496
K +++ HSE+LA+A GLI+T GT L + KNL+IC DCH A+KFIS REI+VRD N
Sbjct: 590 KDDILAVHSEKLAVALGLISTSPGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTN 649
Query: 497 RYHHFKDGICSCGDYW 512
R+HHF G CSCGD+W
Sbjct: 650 RFHHFSGGKCSCGDFW 665
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 118/267 (44%), Gaps = 24/267 (8%)
Query: 20 CDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFA 79
C+ L + DR + N+ W ++ NG A+E + + G P++ T P
Sbjct: 240 CEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCV 299
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP 139
L A + ++A+ GR H +R + DV+V +AL+DMYAKC V +AR +FD ++ R+
Sbjct: 300 LPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRN- 358
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK------TALVDMYAKCGLVK 193
V+S +A I E W L K K T L+ + GL +
Sbjct: 359 -------VVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTE 411
Query: 194 VARNLFEQLREKRVVS-----WNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVL 248
R+ F+++ + VS + M+T G +A DL M E PD + +L
Sbjct: 412 EGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFE--PDAYIWGSLL 469
Query: 249 SACSRGGLFDEGRMFFESMVRDYHIDP 275
+C G D + E + +H++P
Sbjct: 470 GSCRVHGNVDLAEVAAEKL---FHLEP 493
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 118/269 (43%), Gaps = 34/269 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEVAIE 59
G P +A+ L+H Y NA LFD +P QR + W+ L+ A+A G E A
Sbjct: 47 GLARDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGA-- 104
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
+RLLE + D P + +S + R + V+ AL M+
Sbjct: 105 --WRLLE-EMRRDGGVEPNVITWNGLVSGLNRSGRARDAVV------------ALATMHG 149
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
+ +L P + +SA D+ + G++LHG++ + + V
Sbjct: 150 ------------EGLLR--PDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVV 195
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQ 238
TAL+DMY KCG +F++ V S NA+I G + + +AL LF++ D V+
Sbjct: 196 TALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVE 255
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESM 267
+ +++ +++ C + G E FF M
Sbjct: 256 LNVVSWTSIVACCVQNGKDLEAVEFFREM 284
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 105/236 (44%), Gaps = 11/236 (4%)
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR--EKRVVSWNAMI 214
LP R LH + + V ++L+ Y + G AR LF+ + ++ VV W+A++
Sbjct: 33 LPLARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALV 92
Query: 215 TGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
+A G + A L E+M+ + V+P+ IT+ G++S +R G + + +M +
Sbjct: 93 AAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGL 152
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDL---IMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+ P +C + +G G + L ++ + D V AL++ ++G A
Sbjct: 153 LRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALID---MYGKCGQAA 209
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+ E D + L +R A +L K +DRG++ ++ SW +
Sbjct: 210 EVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVV-SWTSI 264
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF +++ LV +Y+ C + +A +FD + RN+ WN +I YA G A+ ++
Sbjct: 323 GFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMF 382
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
+ +L+ PD TF L AC+ EEGR
Sbjct: 383 HSMLKCKQKPDMVTFTCLLAACTQAGLTEEGR 414
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 93/245 (37%), Gaps = 48/245 (19%)
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
L++ L + PD P A K+C L R +H + D FV ++L+ Y
Sbjct: 6 SLHHFLRHVSFPPDPHLLPTAFKSCPTLPL---ARALHAVAEVSGLARDPFVASSLLHAY 62
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
+ NAR +FD + PQ R + G+S
Sbjct: 63 LRLGTTGNARALFDGMPR---------------------PQ-RTVVGWS----------- 89
Query: 179 KTALVDMYAKCGLVKVARNLFEQLR-----EKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
ALV +A G + A L E++R E V++WN +++G G + A+ M
Sbjct: 90 --ALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATM 147
Query: 234 KDE--VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHS 290
E ++PD LSA GL G+ V+ D V T ++D+ G
Sbjct: 148 HGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACV--VTALIDMYGKC 205
Query: 291 GRLDE 295
G+ E
Sbjct: 206 GQAAE 210
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/545 (38%), Positives = 312/545 (57%), Gaps = 47/545 (8%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF F+ +++ L+ +Y+ L +A ++F R+ + ++ W +I Y + + A+ L+
Sbjct: 468 GFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLF 527
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + G+ DN F A+ AC+ + A+++GR+IH + + D+ +G AL+ +YA+C
Sbjct: 528 KEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARC 587
Query: 122 SCVVNARQVFDKILERDP---------------------------------SEATLVTVI 148
V A FD+I +D + T + +
Sbjct: 588 GKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAV 647
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA+A+IA + G+++HG + ++ +V AL+ +YAKCG + +
Sbjct: 648 SAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTID-------------DI 694
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWN+MITGY+ HG +AL LFE MK +V P+H+TFVGVLSACS GL DEG +F SM
Sbjct: 695 SWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSM 754
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+++ P +HY C+VDLLG SG L A + +M ++PD VW LL++C +H ++ +
Sbjct: 755 SEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDI 814
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E A L+ELEP D+ YV++SN+YA + W+ + R++M DRG+KK SW+EV N
Sbjct: 815 GEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDN 874
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
HAF +GD +HP D IY L+ L+ R E GYVP S+ D E +K HSER
Sbjct: 875 SVHAFFAGDQNHPRADMIYEYLRGLDFRAAENGYVPRCNSLLSDAEIRQKDPTEIIHSER 934
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGL++ T L + KNL++C+DCH IK +SKIT+R I VRD R+HHFK G CS
Sbjct: 935 LAIAFGLLSLTSSTPLYVFKNLRVCEDCHNWIKHVSKITDRVIIVRDSYRFHHFKVGSCS 994
Query: 508 CGDYW 512
C DYW
Sbjct: 995 CKDYW 999
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 169/347 (48%), Gaps = 23/347 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + LV LYS L +A Q+F + QR+ +N LI A G A+ L+
Sbjct: 281 GFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALF 340
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ PD T L AC+++ A+ G++ H I+ +D+ V +L+D+Y KC
Sbjct: 341 KKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKC 400
Query: 122 SCVVNARQVFDKILERD------------------PSEATLVTVISASADIAALPQGREL 163
S + A + F + D P++ T +++ + A G ++
Sbjct: 401 SDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQI 460
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
H + F+ NV V + L+DMYAK G + A +F +L+E VVSW AMI GY H
Sbjct: 461 HTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKF 520
Query: 224 TKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF-ESMVRDYHIDPSVQHYT 281
T+AL+LF++M+D+ ++ D+I F +SAC+ D+GR +S + Y D S+ +
Sbjct: 521 TEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGN-- 578
Query: 282 CMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+V L G++ EA Q+ K D W +L++ G+ + A
Sbjct: 579 ALVSLYARCGKVREAYAAFDQIYAK-DNVSWNSLVSGFAQSGYFEEA 624
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 184/412 (44%), Gaps = 47/412 (11%)
Query: 12 KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
KL+ Y A L+ A +FD +P R+L WN + + L+ R+L +
Sbjct: 102 KLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEF 161
Query: 72 DNFTFPFALKACSALS-AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
D F L+ CS + + +IH I + +E+ F+ LID+Y K + +A++V
Sbjct: 162 DERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKV 221
Query: 131 FDKILERDP----------------SEATLV---TVISASADIAALPQGRELHGFSWRHR 171
F+ + RD EA L+ V+SA + G++LHG +
Sbjct: 222 FENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSACTKVEFFEFGKQLHGLVLKQG 281
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
F V ALV +Y++ G + A +F + ++ VS+N++I+G A G+ +AL LF+
Sbjct: 282 FSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFK 341
Query: 232 KMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFE-----SMVRDYHIDPS-VQHYTCMV 284
KM + Q PD +T +LSAC+ G G+ F M D ++ S + Y
Sbjct: 342 KMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCS 401
Query: 285 DL---------LGHSGRLDEACDLIMQMRVK---PDPGVWGALLNSCKLHGHVKLAELAL 332
D+ G L+++ + QM+++ P+ + ++L +C G L E
Sbjct: 402 DIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIH 461
Query: 333 EKLIELEPHDAGNYV--ILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSW 382
++++ YV +L ++YA+ + L I R +K++ SW
Sbjct: 462 TQVLK-TGFQFNVYVSSVLIDMYAKHGKLD-----HALKIFRRLKENDVVSW 507
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/542 (40%), Positives = 306/542 (56%), Gaps = 36/542 (6%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
+P + T L+ LY+ C LH A ++FD +P + W LI AY G A+ +
Sbjct: 105 NPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAF 164
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G+ PD+FT L AC+ ++ + G + + VFV A +D+Y KC +
Sbjct: 165 ANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMA 224
Query: 126 NARQVFDKILERD----------------PSEA-----------------TLVTVISASA 152
AR+VFDK+ +D P EA + +SA
Sbjct: 225 KAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACT 284
Query: 153 DIAALPQGRE-LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+ AL GR+ + W F N + TAL+DMYAKCG A +F+Q+R+K ++ WN
Sbjct: 285 RLGALDLGRQAIRMVDW-DEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWN 343
Query: 212 AMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
AMI G M GH A L +M K V+ + TF+G+L +C+ GL +GR +F +M +
Sbjct: 344 AMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKL 403
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
YHI P ++HY CMVDLL +G L EA L+ M + + + GALL CK+H + +LAE
Sbjct: 404 YHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEH 463
Query: 331 ALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAH 390
L++LI LEP ++GNYV+LSNIY+ WE AKLR M +G++K ACSW+E + K H
Sbjct: 464 VLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVH 523
Query: 391 AFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAI 450
F GD SHP D+IY KL L MK GY P TE V DVE++EK + + HSE+LAI
Sbjct: 524 EFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAI 583
Query: 451 AFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGD 510
AF L+ T G + +TKNL++C DCH AIK +S+IT REI VRD NR+H F+DG CSC D
Sbjct: 584 AFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCND 643
Query: 511 YW 512
YW
Sbjct: 644 YW 645
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 4/193 (2%)
Query: 138 DPSEATL-VTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
+PS T+ + + SAS L G +LH S + N V T+L+ +YAKCGL+ A+
Sbjct: 67 NPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQ 126
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK-MKDEVQPDHITFVGVLSACSRGG 255
+F+++ V W A+IT Y G +A+ + + ++PD T V VL+AC+R
Sbjct: 127 RVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIA 186
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
G + + ++ + SV T VDL G + +A ++ +MR K D WGA+
Sbjct: 187 DLATGETVWRAAEQE-GVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHK-DAVAWGAM 244
Query: 316 LNSCKLHGHVKLA 328
+ +GH + A
Sbjct: 245 VGGYASNGHPREA 257
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/554 (39%), Positives = 316/554 (57%), Gaps = 68/554 (12%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG--LVPDNFTFPFALKAC 83
++Q+ D+ + LF N +IRAY+ + + + Y ++L+ + PDN+TF F ++ C
Sbjct: 62 SNQILDQCAKPTLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTC 121
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN----------------- 126
A SA E G +H +I++ +E D V + LI MYA+ SC+ +
Sbjct: 122 -AQSACEAGPAVHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQT 180
Query: 127 --------------ARQVFDKILERD---------------------------------P 139
AR +FD + +RD
Sbjct: 181 TMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKV 240
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF 199
+E ++++V++A + AL QG+ H + +++ ++ V + TALVDMY KCG V A +F
Sbjct: 241 NEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVF 300
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFD 258
++ EK V +W+ I G AM+G+ K L+LF MK E + P+ ITF+ VL CS G D
Sbjct: 301 WEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVD 360
Query: 259 EGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
EGR F+SM RD+ I+P ++HY CMVDL G +GRL+EA + I M +KP G WGALLN+
Sbjct: 361 EGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNA 420
Query: 319 CKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
C+++ +++L E A KLIE+E + G YV LSNIYA NW+ V+ +R+ M GI K
Sbjct: 421 CRMYKNMELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISKLP 480
Query: 379 ACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKA 438
CS +EV + H F SGD SHP+ D I + R+K AGYV T SV D+E +EK
Sbjct: 481 GCSVMEVNGEVHEFFSGDKSHPSYDVIETMWGEISKRLKLAGYVASTNSVLFDIEEEEKE 540
Query: 439 NMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRY 498
+ +C HSE++AIAFGL + +G + I KNL+IC DCH K ISKI EREI VRD NR+
Sbjct: 541 DALCKHSEKMAIAFGLFSLKEGLPIRIVKNLRICWDCHDVSKMISKIFEREIIVRDRNRF 600
Query: 499 HHFKDGICSCGDYW 512
HHFKDG CSC D+W
Sbjct: 601 HHFKDGECSCKDFW 614
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 149/374 (39%), Gaps = 46/374 (12%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V T +V + C + A LFD +PQR+ WN +I YA G A+ L+ +
Sbjct: 177 VCQTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMD 236
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ + + + AC+ L A+++G+ H + +NK + V +G AL+DMY KC V A
Sbjct: 237 GVKVNEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRA 296
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
+VF ++ E++ P+E T ++V+ + +
Sbjct: 297 LKVFWEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVV 356
Query: 155 AALPQGRE-LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK-RVVSWNA 212
+ +GR H E ++ +VD+Y + G ++ A N + K +W A
Sbjct: 357 GFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGA 416
Query: 213 MITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM-VRDY 271
++ M+ + K+ + +H +V + + + G +D +SM
Sbjct: 417 LLNACRMYKNMELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGI 476
Query: 272 HIDP--SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
P SV V + + D+I M WG + KL G+V
Sbjct: 477 SKLPGCSVMEVNGEVHEFFSGDKSHPSYDVIETM--------WGEISKRLKLAGYVASTN 528
Query: 330 LALEKLIELEPHDA 343
L + E E DA
Sbjct: 529 SVLFDIEEEEKEDA 542
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/545 (38%), Positives = 312/545 (57%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+G + + L+H+YS C + +A ++FD +P+++ W+ ++ + G A+ +Y
Sbjct: 141 GYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMY 200
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+ E G+ D ++AC+ G +H +R+ DV + +L+DMYAK
Sbjct: 201 SRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKN 260
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
ARQVF + R+ P LV+ +
Sbjct: 261 GHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSAL 320
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A AD+ L G+ +HGF R R E + TA++DMY+KCG ++ AR LF +L + +V
Sbjct: 321 LACADVGFLKLGKSIHGFILR-RLEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLV 379
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
WNAMI HG AL LF+++ + ++PDH TF +LSA S GL +EG+ +F+ M
Sbjct: 380 LWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRM 439
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ ++ I+P+ +H C+VDLL SG ++EA +++ M +P +W ALL+ C + ++L
Sbjct: 440 ITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLEL 499
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E +K++E +P D G ++SN+YA A W+ V ++RKLM D G KK S IEV
Sbjct: 500 GETIAKKILESQPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHG 559
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
HAF+ D SHP EI + L M++ GYVP TE V+HD++ D K ++ HSER
Sbjct: 560 TRHAFVMEDQSHPQHQEILKMISKLSFEMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSER 619
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGL+NT GTRL+I KNL++C DCH AIK+ISKI +REI VRD R+HHFKDG CS
Sbjct: 620 LAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGACS 679
Query: 508 CGDYW 512
CGDYW
Sbjct: 680 CGDYW 684
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 168/373 (45%), Gaps = 40/373 (10%)
Query: 41 WNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVI 100
WN L+ A + G A+ ++ R L PD+ TF AL AC+ L ++ +
Sbjct: 80 WNALLAARSRAGSPGAALRVF-RALPSSARPDSTTFTLALTACARLGDLDAAEAVRVRAF 138
Query: 101 RNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----------------PSEA-- 142
+ DVFV +AL+ +Y++C + +A +VFD + +D P EA
Sbjct: 139 AAGYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALG 198
Query: 143 ---------------TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYA 187
+V VI A G +HG RH ++V + T+LVDMYA
Sbjct: 199 MYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYA 258
Query: 188 KCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVG 246
K G VAR +F + + VSWNA+I+G+A +GH+ +ALDLF +M +QPD V
Sbjct: 259 KNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVS 318
Query: 247 VLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK 306
L AC+ G G+ ++R + T ++D+ G L+ A L ++ +
Sbjct: 319 ALLACADVGFLKLGKSIHGFILRRLEFQCILG--TAVLDMYSKCGSLESARKLFNKLSSR 376
Query: 307 PDPGVWGALLNSCKLH--GHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAK 364
D +W A++ C H GH LA ++P A +LS + EG
Sbjct: 377 -DLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFW 435
Query: 365 LRKLMIDRGIKKS 377
+++ + GI+ +
Sbjct: 436 FDRMITEFGIEPT 448
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 104/263 (39%), Gaps = 54/263 (20%)
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKR--VVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ 238
+L YA+ G + A + R + +WNA++ + G AL +F + +
Sbjct: 49 SLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRAGSPGAALRVFRALPSSAR 108
Query: 239 PDHITFVGVLSACSRGGLFDEG-----RMFFESMVRDYHIDPSVQH-------------- 279
PD TF L+AC+R G D R F RD + ++ H
Sbjct: 109 PDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRV 168
Query: 280 -----------YTCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWGALLNSCKLHGHV 325
++ MV +GR EA + +MR V D V ++ +C L G+
Sbjct: 169 FDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGNT 228
Query: 326 KLAELALEKLIELEPHDAGNYVILS----NIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
++ + + H V+++ ++YA+ +++ ++ ++M R A S
Sbjct: 229 RMGASVHGRFLR---HGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRN-----AVS 280
Query: 382 WIEVKNKAHAFLSGDASHPNCDE 404
W +A +SG A + + DE
Sbjct: 281 W-------NALISGFAQNGHADE 296
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/561 (39%), Positives = 310/561 (55%), Gaps = 65/561 (11%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ Y + L +A QLFDR+P R++ WN +I YA G A RL + D
Sbjct: 207 LMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQA----KRLFNESPIRD 262
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDV-IRNKWETDVFVGA------------------- 112
FT+ + ++E R+ +++ ++N+ + +
Sbjct: 263 VFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPC 322
Query: 113 -------ALIDMYAKCSCVVNARQVFDKILERD--------------------------- 138
+I Y + + AR++FD + +RD
Sbjct: 323 RNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEM 382
Query: 139 ------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLV 192
+ +T +S ADIAAL G+++HG + FE V AL+ MY KCG
Sbjct: 383 KRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGST 442
Query: 193 KVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSAC 251
A ++FE + EK VVSWN MI GYA HG +AL LFE MK V+PD IT VGVLSAC
Sbjct: 443 DEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSAC 502
Query: 252 SRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV 311
S GL D G +F SM RDY++ P+ +HYTCM+DLLG +GRL+EA +L+ M P
Sbjct: 503 SHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAAS 562
Query: 312 WGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMID 371
WGALL + ++HG+ +L E A E + ++EP ++G YV+LSN+YA + W V K+R M +
Sbjct: 563 WGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMRE 622
Query: 372 RGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHD 431
G++K SW+EV+NK H F GD HP D IYA L+ L+ +M+ GYV T+ V HD
Sbjct: 623 AGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHD 682
Query: 432 VENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREIT 491
VE +EK +M+ HSE+LA+AFG++ P G + + KNL++C DCH AIK ISKI R I
Sbjct: 683 VEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLII 742
Query: 492 VRDVNRYHHFKDGICSCGDYW 512
+RD +R+HHF +GICSCGDYW
Sbjct: 743 LRDSHRFHHFSEGICSCGDYW 763
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 147/350 (42%), Gaps = 46/350 (13%)
Query: 17 YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY--------------- 61
Y+ + A ++F+++P RN WN L+ AY NG + A L+
Sbjct: 149 YAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLM 208
Query: 62 ------------YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRI-HEDVIRNKWETDV 108
+L + V D ++ + + + + + +R+ +E IR DV
Sbjct: 209 GGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIR-----DV 263
Query: 109 FVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGREL--HGF 166
F A++ Y + V AR+ FD E + IS +A +A Q +++ G
Sbjct: 264 FTWTAMVSGYVQNGMVDEARKYFD--------EMPVKNEISYNAMLAGYVQYKKMVIAGE 315
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ N+ ++ Y + G + AR LF+ + ++ VSW A+I+GYA +GH +A
Sbjct: 316 LFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEA 375
Query: 227 LDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
L++F +MK D + TF LS C+ + G+ +V+ + ++
Sbjct: 376 LNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKA-GFETGCFVGNALLG 434
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+ G DEA D+ + K D W ++ HG + A + E +
Sbjct: 435 MYFKCGSTDEANDVFEGIEEK-DVVSWNTMIAGYARHGFGRQALVLFESM 483
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 152/351 (43%), Gaps = 60/351 (17%)
Query: 20 CDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFA 79
CD +A ++F+ +P+R+ +N +I Y N + +A +L+ ++ E L N
Sbjct: 62 CD---SALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVM---- 114
Query: 80 LKACSALSAIEEGRRIHE-----DVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI 134
L+ RR+ E D++ K DV A++ YA+ V AR+VF+K+
Sbjct: 115 ------LTGYVRNRRLGEAHKLFDLMPKK---DVVSWNAMLSGYAQNGFVDEAREVFNKM 165
Query: 135 LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV 194
R+ + +++A L + R L F + +EL L+ Y K ++
Sbjct: 166 PHRN--SISWNGLLAAYVHNGRLKEARRL--FESQSNWEL--ISWNCLMGGYVKRNMLGD 219
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRG 254
AR LF+++ + V+SWN MI+GYA G ++A LF + D T+ ++S +
Sbjct: 220 ARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLF---NESPIRDVFTWTAMVSGYVQN 276
Query: 255 GLFDEGRMFFESMVRDYHID--------------------------PSVQHYTCMVDLLG 288
G+ DE R +F+ M I ++ + M+ G
Sbjct: 277 GMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYG 336
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
+G + +A L M + D W A+++ +GH E AL +E++
Sbjct: 337 QNGGIAQARKLF-DMMPQRDCVSWAAIISGYAQNGHY---EEALNMFVEMK 383
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 99/244 (40%), Gaps = 16/244 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+ +Y C A+ +F+ I ++++ WN +I YA +G A+ L+
Sbjct: 421 GFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLF 480
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN---KWETDVFVGAALIDMY 118
+ + G+ PD T L ACS I+ G + R+ K + + +ID+
Sbjct: 481 ESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYT--CMIDLL 538
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
+ + A + + + DP A+ ++ AS G + ++ + N +
Sbjct: 539 GRAGRLEEAENLM-RNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQ-NSGM 596
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM-----HGHSTKALDLFEKM 233
L ++YA G + ++RE V +TGY+ H+ D F
Sbjct: 597 YVLLSNLYAASGRWVDVGKMRSKMREAGVQK----VTGYSWVEVQNKIHTFSVGDCFHPE 652
Query: 234 KDEV 237
KD +
Sbjct: 653 KDRI 656
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHI 242
+ + + G A +F + + VS+NAMI+GY + + A DLF+KM + D
Sbjct: 53 ISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPER---DLF 109
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
++ +L+ R E F+ M + V + M+ +G +DEA ++ +
Sbjct: 110 SWNVMLTGYVRNRRLGEAHKLFDLMPK-----KDVVSWNAMLSGYAQNGFVDEAREVFNK 164
Query: 303 MRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
M + + W LL + +G +K A E
Sbjct: 165 MPHR-NSISWNGLLAAYVHNGRLKEARRLFE 194
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 17/143 (11%)
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEG 260
+ ++ +V+WN I+ + +GH AL +F M + +++ ++S R F
Sbjct: 40 KFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMP---RRSSVSYNAMISGYLRNAKFSLA 96
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGH--SGRLDEACDLIMQMRVKPDPGVWGALLNS 318
R F+ M P ++ V L G+ + RL EA L M K D W A+L+
Sbjct: 97 RDLFDKM-------PERDLFSWNVMLTGYVRNRRLGEAHKLFDLM-PKKDVVSWNAMLSG 148
Query: 319 CKLHGHVKLAELALEKLIELEPH 341
+G V A K+ PH
Sbjct: 149 YAQNGFVDEAREVFNKM----PH 167
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/539 (38%), Positives = 316/539 (58%), Gaps = 35/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+ +Y+ C CL +A ++F R+P+R++ W+ +I A+A ++ AIE Y ++ G
Sbjct: 258 LQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEG 317
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P+ +TF L AC+++ + GR +H+ ++ N ++ + G AL+D+Y + AR
Sbjct: 318 VRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEAR 377
Query: 129 QVFDKILERDPSEATLVT----------------------------------VISASADI 154
+FD+I RD T++ VISA A +
Sbjct: 378 SLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASL 437
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
A R+ H + + T+LV+MY++ G ++ AR +F+++ + ++W +I
Sbjct: 438 GAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLI 497
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
GYA HG AL L+++M+ E +P +TF+ VL ACS GL ++G+ F S+ DY +
Sbjct: 498 AGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAM 557
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P++ HY+C++DLL +GRL +A +LI M V+P+ W +LL + ++H VK A A
Sbjct: 558 HPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAG 617
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
++ +L+P D +YV+LSN++A N G+A +R M+ RG+KK SWIEV ++ H F
Sbjct: 618 QITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFN 677
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD SHP EI+A+L+ L ++KEAGYVP +E V HDV EK ++ HSE+LAIAFG
Sbjct: 678 VGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFG 737
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LI T GT L I L+IC DCH A+KFIS I REI VRD +R+H F+DG CSCGDYW
Sbjct: 738 LIATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 796
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 181/350 (51%), Gaps = 40/350 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L ++V Y C + +A FD I ++N + W ++ AYA NG Y A++LY R+
Sbjct: 60 LGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM---D 116
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK-WETDVFVGAALIDMYAKCSCVVNA 127
L P+ + L AC+++ A+EEG+ IH + K + DV + +L+ MYAKC + +A
Sbjct: 117 LQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDA 176
Query: 128 RQVFDKILER-------------------------------DPSEATLVTVISASADIAA 156
+++F+++ R +PS T +V+SA +++
Sbjct: 177 KRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEPSVRTFTSVLSACSNLGL 236
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
L QGR++H EL++ ++ AL+ MYA+C + A +F++L + VVSW+AMI
Sbjct: 237 LDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAA 296
Query: 217 YAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD-YHID 274
+A +A++ + KM+ E V+P++ TF VL AC+ G GR + ++ + Y I
Sbjct: 297 FAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKI- 355
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
++ + T +VDL G LDEA L Q+ + D G+W L+ GH
Sbjct: 356 -TLVNGTALVDLYTSYGSLDEARSLFDQIENR-DEGLWTVLIGGYSKQGH 403
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 185/389 (47%), Gaps = 42/389 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP-QRNLFLWNVLIRAYAWNGPYEVAIEL 60
G +L L+ +Y+ C L +A +LF+R+ +R++ WN +I AYA +G +E AI L
Sbjct: 152 GLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRL 211
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
Y ++ + P TF L ACS L +++GR+IH + E D+ + AL+ MYA+
Sbjct: 212 YE---DMDVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYAR 268
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C C+ +A ++F ++ RD P+ T +V
Sbjct: 269 CKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASV 328
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A A + L GR +H + +++ + TALVD+Y G + AR+LF+Q+ +
Sbjct: 329 LLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDE 388
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKD--EVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
W +I GY+ GH T L+L+ +MK+ +V I + V+SAC+ G F + R
Sbjct: 389 GLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHS 448
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
+ D I V T +V++ G L+ A + +M + D W L+ HG
Sbjct: 449 DIEADGMISDFVLA-TSLVNMYSRWGNLESARQVFDKMSSR-DTLAWTTLIAGYAKHGEH 506
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYA 354
LA L L K +ELE + + +YA
Sbjct: 507 GLA-LGLYKEMELEGAEPSELTFMVVLYA 534
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 133/271 (49%), Gaps = 42/271 (15%)
Query: 79 ALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD 138
AL+ C L ++ R+IH D I +VF+G ++ Y KC V +AR FD I ++
Sbjct: 33 ALRQCQDLESV---RQIH-DRISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKN 88
Query: 139 ------------------------------PSEATLVTVISASADIAALPQGRELHG-FS 167
P+ TV+ A A I AL +G+ +H S
Sbjct: 89 DYSWGSMLTAYAQNGHYRAALDLYKRMDLQPNPVVYTTVLGACASIEALEEGKAIHSRIS 148
Query: 168 WRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR-VVSWNAMITGYAMHGHSTKA 226
+L+V ++ +L+ MYAKCG ++ A+ LFE++ +R V SWNAMI YA GH +A
Sbjct: 149 GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEA 208
Query: 227 LDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM-VRDYHIDPSVQHYTCMVD 285
+ L+E M +V+P TF VLSACS GL D+GR + R +D S+Q+ ++
Sbjct: 209 IRLYEDM--DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQN--ALLT 264
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
+ LD+A I Q + D W A++
Sbjct: 265 MYARCKCLDDAAK-IFQRLPRRDVVSWSAMI 294
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 3/166 (1%)
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
NV + +V Y KCG V AR F+ + K SW +M+T YA +GH ALDL+++M
Sbjct: 57 NVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM- 115
Query: 235 DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLD 294
++QP+ + + VL AC+ +EG+ + + V ++ + G L+
Sbjct: 116 -DLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLE 174
Query: 295 EACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEP 340
+A L +M + W A++ + GH + A + L + +++EP
Sbjct: 175 DAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEA-IRLYEDMDVEP 219
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 77/145 (53%), Gaps = 2/145 (1%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VLAT LV++YS L +A Q+FD++ R+ W LI YA +G + +A+ LY +
Sbjct: 460 VLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELE 519
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN-KWETDVFVGAALIDMYAKCSCVVN 126
G P TF L ACS E+G+++ + + ++ + +ID+ ++ + +
Sbjct: 520 GAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSD 579
Query: 127 ARQVFDKILERDPSEATLVTVISAS 151
A ++ + + +P++ T +++ AS
Sbjct: 580 AEELINA-MPVEPNDVTWSSLLGAS 603
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/539 (38%), Positives = 316/539 (58%), Gaps = 35/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+ +Y+ C CL +A ++F R+P+R++ W+ +I A+A ++ AIE Y ++ G
Sbjct: 257 LQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEG 316
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P+ +TF L AC+++ + GR +H+ ++ N ++ + G AL+D+Y + AR
Sbjct: 317 VRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEAR 376
Query: 129 QVFDKILERDPSEATLVT----------------------------------VISASADI 154
+FD+I RD T++ VISA A +
Sbjct: 377 SLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASL 436
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
A R+ H + + T+LV+MY++ G ++ AR +F+++ + ++W +I
Sbjct: 437 GAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLI 496
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
GYA HG AL L+++M+ E +P +TF+ VL ACS GL ++G+ F S+ DY +
Sbjct: 497 AGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAM 556
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P++ HY+C++DLL +GRL +A +LI M V+P+ W +LL + ++H VK A A
Sbjct: 557 HPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAG 616
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
++ +L+P D +YV+LSN++A N G+A +R M+ RG+KK SWIEV ++ H F
Sbjct: 617 QITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFN 676
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD SHP EI+A+L+ L ++KEAGYVP +E V HDV EK ++ HSE+LAIAFG
Sbjct: 677 VGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFG 736
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LI T GT L I L+IC DCH A+KFIS I REI VRD +R+H F+DG CSCGDYW
Sbjct: 737 LIATAPGTTLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 795
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 181/349 (51%), Gaps = 39/349 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L ++V Y C + +A FD I ++N + W ++ AYA NG Y A++LY R+
Sbjct: 60 LGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM---D 116
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK-WETDVFVGAALIDMYAKCSCVVNA 127
L P+ + L AC+++ A+EEG+ IH + K + DV + +L+ MYAKC + +A
Sbjct: 117 LQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDA 176
Query: 128 RQVFDKILER------------------------------DPSEATLVTVISASADIAAL 157
+++F+++ R +PS T +V+SA +++ L
Sbjct: 177 KRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEPSVRTFTSVLSACSNLGLL 236
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
QGR++H EL++ ++ AL+ MYA+C + A +F++L + VVSW+AMI +
Sbjct: 237 DQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAF 296
Query: 218 AMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD-YHIDP 275
A +A++ + KM+ E V+P++ TF VL AC+ G GR + ++ + Y I
Sbjct: 297 AETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKI-- 354
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
++ + T +VDL G LDEA L Q+ + D G+W L+ GH
Sbjct: 355 TLVNGTALVDLYTSYGSLDEARSLFDQIENR-DEGLWTVLIGGYSKQGH 402
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 184/388 (47%), Gaps = 41/388 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G +L L+ +Y+ C L +A +LF+R+ R++ WN +I AYA +G +E AI LY
Sbjct: 152 GLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLY 211
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ + P TF L ACS L +++GR+IH + E D+ + AL+ MYA+C
Sbjct: 212 E---DMDVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARC 268
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
C+ +A ++F ++ RD P+ T +V+
Sbjct: 269 KCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVL 328
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A A + L GR +H + +++ + TALVD+Y G + AR+LF+Q+ +
Sbjct: 329 LACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEG 388
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKD--EVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
W +I GY+ GH T L+L+ +MK+ +V I + V+SAC+ G F + R
Sbjct: 389 LWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSD 448
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+ D I V T +V++ G L+ A + +M + D W L+ HG
Sbjct: 449 IEADGMISDFVLA-TSLVNMYSRWGNLESARQVFDKMSSR-DTLAWTTLIAGYAKHGEHG 506
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYA 354
LA L L K +ELE + + +YA
Sbjct: 507 LA-LGLYKEMELEGAEPSELTFMVVLYA 533
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 132/270 (48%), Gaps = 41/270 (15%)
Query: 79 ALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD 138
AL+ C L ++ R+IH D I +VF+G ++ Y KC V +AR FD I ++
Sbjct: 33 ALRQCQDLESV---RQIH-DRISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKN 88
Query: 139 ------------------------------PSEATLVTVISASADIAALPQGRELHG-FS 167
P+ TV+ A A I AL +G+ +H S
Sbjct: 89 DYSWGSMLTAYAQNGHYRAALDLYKRMDLQPNPVVYTTVLGACASIKALEEGKAIHSRIS 148
Query: 168 WRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKAL 227
+L+V ++ +L+ MYAKCG ++ A+ LFE++ + V SWNAMI YA GH +A+
Sbjct: 149 GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAI 208
Query: 228 DLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM-VRDYHIDPSVQHYTCMVDL 286
L+E M +V+P TF VLSACS GL D+GR + R +D S+Q+ ++ +
Sbjct: 209 RLYEDM--DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQN--ALLTM 264
Query: 287 LGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
LD+A I Q + D W A++
Sbjct: 265 YARCKCLDDAAK-IFQRLPRRDVVSWSAMI 293
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 4/166 (2%)
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
NV + +V Y KCG V AR F+ + K SW +M+T YA +GH ALDL+++M
Sbjct: 57 NVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM- 115
Query: 235 DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLD 294
++QP+ + + VL AC+ +EG+ + + V ++ + G L+
Sbjct: 116 -DLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLE 174
Query: 295 EACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEP 340
+A L +M + W A++ + GH + A + L + +++EP
Sbjct: 175 DAKRLFERMSGRS-VSSWNAMIAAYAQSGHFEEA-IRLYEDMDVEP 218
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 77/145 (53%), Gaps = 2/145 (1%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VLAT LV++YS L +A Q+FD++ R+ W LI YA +G + +A+ LY +
Sbjct: 459 VLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELE 518
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN-KWETDVFVGAALIDMYAKCSCVVN 126
G P TF L ACS E+G+++ + + ++ + +ID+ ++ + +
Sbjct: 519 GAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSD 578
Query: 127 ARQVFDKILERDPSEATLVTVISAS 151
A ++ + + +P++ T +++ AS
Sbjct: 579 AEELINA-MPVEPNDVTWSSLLGAS 602
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/507 (42%), Positives = 309/507 (60%), Gaps = 15/507 (2%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T +V Y+ L A ++FD +P+RN WN ++ AY + A EL+ ++
Sbjct: 259 TAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELF------NMM 312
Query: 71 P--DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P + ++ L + +EE + + + + + D AA++ Y++ C
Sbjct: 313 PCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP----QKDAVSWAAMLAAYSQGGCSEETL 368
Query: 129 QVFDKILERDP--SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
Q+F ++ + + V+S ADIAAL G +LHG R + + V AL+ MY
Sbjct: 369 QLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMY 428
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFV 245
KCG ++ ARN FE++ E+ VVSWN MI GYA HG +AL++F+ M+ +PD IT V
Sbjct: 429 FKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLV 488
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
GVL+ACS GL ++G +F SM D+ + +HYTCM+DLLG +GRL EA DL+ M
Sbjct: 489 GVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPF 548
Query: 306 KPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKL 365
+PD +WGALL + ++H + +L A EK+ ELEP +AG YV+LSNIYA + W K+
Sbjct: 549 EPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKM 608
Query: 366 RKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGT 425
R +M +RG+KK SWIEV+NK H F +GD HP ++IYA L+ L+ RMK+AGYV T
Sbjct: 609 RVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSAT 668
Query: 426 ESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKI 485
+ V HDVE +EK +M+ HSE+LA+A+G++N P G + + KNL++C DCH A K+IS I
Sbjct: 669 DMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAI 728
Query: 486 TEREITVRDVNRYHHFKDGICSCGDYW 512
R I +RD NR+HHF+ G CSCGDYW
Sbjct: 729 EGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 157/345 (45%), Gaps = 34/345 (9%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+A +LF +P+R+ +N ++ Y+ NG +A L+ + PDN+++ L A +
Sbjct: 56 DAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR----PDNYSYNTLLHALA 111
Query: 85 ALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEAT 143
S++ + R + +++ +R+ +V +I +A V AR FD E+D
Sbjct: 112 VSSSLADARGLFDEMPVRDSVTYNV-----MISSHANHGLVSLARHYFDLAPEKD----- 161
Query: 144 LVTVISASADIAA-LPQGR--ELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
+S + +AA + GR E G + R E + AL+ Y + G + AR LF+
Sbjct: 162 ---AVSWNGMLAAYVRNGRVEEARGL-FNSRTEWDAISWNALMSGYVQWGKMSEARELFD 217
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEG 260
++ + VVSWN M++GYA G +A LF+ D T+ V+S ++ G+ +E
Sbjct: 218 RMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR---DVFTWTAVVSGYAQNGMLEEA 274
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
R F++M + + MV +DEA +L M + + W +L
Sbjct: 275 RRVFDAMPERNAVS-----WNAMVAAYIQRRMMDEAKELFNMMPCR-NVASWNTMLTGYA 328
Query: 321 LHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKL 365
G ++ A+ + + + DA ++ + Y++ E +L
Sbjct: 329 QAGMLEEAKAVFDTMPQ---KDAVSWAAMLAAYSQGGCSEETLQL 370
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 17/214 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+G + L+ +Y C + +A F+ + +R++ WN +I YA +G + A+E++
Sbjct: 413 GYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIF 472
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEG----RRIHEDV-IRNKWETDVFVGAALID 116
+ PD+ T L ACS +E+G +H D + K E +ID
Sbjct: 473 DMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYT----CMID 528
Query: 117 MYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL-- 174
+ + + A + K + +P ++ AS + + EL + FEL
Sbjct: 529 LLGRAGRLAEAHDLM-KDMPFEPDSTMWGALLGAS----RIHRNPELGRSAAEKIFELEP 583
Query: 175 -NVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
N + L ++YA G + AR + + E+ V
Sbjct: 584 ENAGMYVLLSNIYASSGKWRDARKMRVMMEERGV 617
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 37/213 (17%)
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
R E V + + + G V A LF + + ++NAM+ GY+ +G A LF
Sbjct: 33 RLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF 92
Query: 231 EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM-VRD---YHIDPSVQHYTCMVDL 286
+ +PD+ ++ +L A + + R F+ M VRD Y++ S +V L
Sbjct: 93 RAIP---RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSL 149
Query: 287 LGH----------------------SGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
H +GR++EA L R + D W AL++ G+
Sbjct: 150 ARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF-NSRTEWDAISWNALMS-----GY 203
Query: 325 VKLAEL--ALEKLIELEPHDAGNYVILSNIYAR 355
V+ ++ A E + D ++ I+ + YAR
Sbjct: 204 VQWGKMSEARELFDRMPGRDVVSWNIMVSGYAR 236
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/518 (42%), Positives = 305/518 (58%), Gaps = 47/518 (9%)
Query: 41 WNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVI 100
WN +I +Y A+ +Y +L ++ DNF P LKAC +S + G+ IH V+
Sbjct: 127 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 186
Query: 101 RNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD-----PSEATLV---------- 145
+ + DVFVG AL+ MY +C+CV AR VFDK++ERD P+ L+
Sbjct: 187 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLG 246
Query: 146 ------------TVISASADIAA------LPQGRELH-------------GFSWRHRFEL 174
TV+S +A IA L +G +L + R E+
Sbjct: 247 LARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLNKERVEV 306
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
+ + TALVDMYAKCG + A LF + + + WNA+ITG+AMHG+ +ALD+F +M+
Sbjct: 307 DCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEME 366
Query: 235 DE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
+ V+P+ ITF+G+L ACS GL EG+ FE MV + + P ++HY CMVDLLG +G L
Sbjct: 367 RQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLL 426
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIY 353
DEA ++I M +KP+ VWGAL+ +C+LH + +L ELA +L+E+EP + G V++SNIY
Sbjct: 427 DEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIY 486
Query: 354 ARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLE 413
A A W A +RK M G+KK S IEV H FL GD SHP I L +
Sbjct: 487 AAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMR 546
Query: 414 GRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICD 473
++ EAGYVP T +V +++ +EK + HSE+LA+AFGLI+T T + I KNL++C+
Sbjct: 547 RKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCN 606
Query: 474 DCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
DCH A K +SKI R I VRD NR+HHF++G CSCGDY
Sbjct: 607 DCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDY 644
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 54/93 (58%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+L T LV +Y+ C ++ A +LF R++ +WN +I +A +G E A++++ +
Sbjct: 309 ILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQ 368
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVI 100
G+ P++ TF L ACS + EG+++ E ++
Sbjct: 369 GVKPNDITFIGLLHACSHAGLVTEGKKLFEKMV 401
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/547 (38%), Positives = 318/547 (58%), Gaps = 36/547 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + L+ Y C A +FD R++ WN++I A+ G E A +L
Sbjct: 141 GFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLL 200
Query: 62 YRLLEI-GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ L PD T + AC+ L +E G+ +H + ++ V A++DMY K
Sbjct: 201 DEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCK 260
Query: 121 CSCVVNARQVFDKILERDP---------------------------------SEATLVTV 147
C + +A++VF++I E+D E TLV V
Sbjct: 261 CDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGV 320
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+SA A AL QG+ +H + ++ ++TALVDMYAKCG + +A +F ++R + V
Sbjct: 321 LSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNV 380
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
+WNA+I G AMHGH A+ LF++M+ D++ PD +TF+ +L ACS GL DEG F++
Sbjct: 381 FTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQA 440
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M + I+P ++HY C+VDLL + ++D+A I M +K + +W LL +C+ GH
Sbjct: 441 MKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFD 500
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
LAE ++IELEP G YV+LSN+YA + W+ KLRK M ++GI+K+ CSWIE+
Sbjct: 501 LAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELN 560
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMK-EAGYVPGTESVFHDVENDEKANMICCHS 445
H F++GD SH ++IYA ++ + R+ + G+VPGT +V D+E +EK + + HS
Sbjct: 561 GMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHS 620
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
E+LAIA GLI+TP G+ + I KNL++C+DCH +K SK+ REI RD +R+HHFK+G
Sbjct: 621 EKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGS 680
Query: 506 CSCGDYW 512
CSC D+W
Sbjct: 681 CSCMDFW 687
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 198/357 (55%), Gaps = 41/357 (11%)
Query: 6 HPVLATKLVHLYSACDC--LHNAHQLFDRIPQRNLFLWNVLIRAYAWN-GPYEVAIELYY 62
+P+ ++KL+ + L+ A +LF ++ + F+ N +IR YA + PYE A+ LYY
Sbjct: 42 NPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYE-AVSLYY 100
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
++E G+ DN+T+PF L AC+ L A++ GRR H +V++N + +D+FV ALI Y C
Sbjct: 101 FMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCG 160
Query: 123 CVVNARQVFDKILERD----------------------------------PSEATLVTVI 148
A VFD+ RD P E T+V+++
Sbjct: 161 SFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLV 220
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A A + L +G+ LH +S + N++V A++DMY KC ++ A+ +F ++REK V+
Sbjct: 221 PACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVL 280
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SW +M++G A G+ +AL LF+KM+ ++++ D IT VGVLSAC++ G D+G+ + +
Sbjct: 281 SWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGK-YIHLL 339
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+ + I+ + T +VD+ G +D A + +MRV+ + W AL+ +HGH
Sbjct: 340 IDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR-NVFTWNALIGGLAMHGH 395
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 118/233 (50%), Gaps = 6/233 (2%)
Query: 107 DVFVGAALIDMYAKCSCVVNARQVFDKILERD-PSEA-TLVTVISASADIAALPQGRELH 164
D F+ +I YA+ A ++ ++ER P + T V++A A + A+ GR H
Sbjct: 75 DPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFH 134
Query: 165 GFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST 224
++ F ++ V AL+ Y CG A ++F++ + VV+WN MI + G S
Sbjct: 135 CEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSE 194
Query: 225 KALDLFEKMK--DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTC 282
KA DL ++M D ++PD +T V ++ AC++ G + G+ F S ++ +D +++
Sbjct: 195 KAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGK-FLHSYSKELGLDENLRVNNA 253
Query: 283 MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
++D+ ++ A ++ ++R K D W ++L+ G+ + A +K+
Sbjct: 254 ILDMYCKCDDIESAQEVFNRIREK-DVLSWTSMLSGLAKSGYFQEALALFQKM 305
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYA--KCGLVKVARNLFEQ 201
L++V ++ + ++ H R N + L+ A G + AR LF Q
Sbjct: 11 LISVDFLKTHCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQ 70
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEG 260
++ N MI GYA + +A+ L+ M + P D+ T+ VL+AC+R G G
Sbjct: 71 MQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLG 130
Query: 261 RMFFESMVRD------YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGA 314
R F ++++ + I+ +Q Y + G ACD+ + V+ D W
Sbjct: 131 RRFHCEVLKNGFGSDLFVINALIQFYH-------NCGSFGCACDVFDESTVR-DVVTWNI 182
Query: 315 LLNSCKLHGHVKLAELALEKLIELEPHD 342
++N+ H + L+E A + L E+ D
Sbjct: 183 MINA---HLNKGLSEKAFDLLDEMTKLD 207
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/541 (39%), Positives = 309/541 (57%), Gaps = 37/541 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ ++ +Y + A +FDR+ R+L WN ++ + NG A E++ + G
Sbjct: 161 VGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDG 220
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDV---FVGAALIDMYAKCSCVV 125
V D T L AC + ++ G+ IH V+RN V F+ ++IDMY C V
Sbjct: 221 FVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVS 280
Query: 126 NARQVFDKILERD---------------------------------PSEATLVTVISASA 152
AR++F+ + +D P E T+++V++A
Sbjct: 281 CARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACN 340
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
I+AL G + + + + +NV V TAL+ MYA CG + A +F+++ EK + +
Sbjct: 341 QISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTV 400
Query: 213 MITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
M+TG+ +HG +A+ +F E + V PD F VLSACS GL DEG+ F M RDY
Sbjct: 401 MVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDY 460
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
++P HY+C+VDLLG +G LDEA +I M++KP+ VW ALL++C+LH +VKLA ++
Sbjct: 461 SVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVIS 520
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHA 391
+KL EL P YV LSNIYA WE V +R L+ R ++K + S++E+ H
Sbjct: 521 AQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQ 580
Query: 392 FLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIA 451
F GD SH D+IYAKLK L ++K+AGY P T V +DVE + K M+ HSERLA+A
Sbjct: 581 FFVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPDTSLVLYDVEEEIKEKMLWDHSERLALA 640
Query: 452 FGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
F LINT GT + ITKNL++C DCH IK ISK+T REI +RD+ R+HHF+DG+CSCG Y
Sbjct: 641 FALINTGPGTTIRITKNLRVCGDCHTVIKMISKLTNREIIMRDICRFHHFRDGLCSCGGY 700
Query: 512 W 512
W
Sbjct: 701 W 701
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/422 (32%), Positives = 199/422 (47%), Gaps = 74/422 (17%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
LATKL Y+ C + A +FD+I +N FLWN +IR YA N A+ LY ++L G
Sbjct: 60 LATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFG 119
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
PDNFT+PF LKAC L E GR++H V+ E DV+VG +++ MY K V AR
Sbjct: 120 QKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAAR 179
Query: 129 QVFDKILERDPSE---------------------------------ATLVTVISASADIA 155
VFD++L RD + TL+ ++SA D+
Sbjct: 180 VVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVM 239
Query: 156 ALPQGRELHGFSWRHRFE---LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
L G+E+HG+ R+ N + +++DMY C V AR LFE LR K VVSWN+
Sbjct: 240 DLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNS 299
Query: 213 MITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACS-----------------RG 254
+I+GY G + +AL+LF +M PD +T + VL+AC+ RG
Sbjct: 300 LISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRG 359
Query: 255 ------------GLFDE-GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
G++ G + V D + ++ T MV G GR EA +
Sbjct: 360 YVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFY 419
Query: 302 QM---RVKPDPGVWGALLNSCKLHGHVKLAELALEKLI---ELEPHDAGNYVILSNIYAR 355
+M V PD G++ A+L++C G V + K+ +EP +Y L ++ R
Sbjct: 420 EMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPT-HYSCLVDLLGR 478
Query: 356 AA 357
A
Sbjct: 479 AG 480
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 117/247 (47%), Gaps = 18/247 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ + V+ T L+ +Y+ C L A ++FD +P++NL V++ + +G AI ++
Sbjct: 359 GYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIF 418
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN-KWETDVFVGAALIDMYAK 120
Y +L G+ PD F L ACS ++EG+ I + R+ E + L+D+ +
Sbjct: 419 YEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGR 478
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELN---VK 177
+ A V + ++ P+E ++SA L + +L S + FELN V
Sbjct: 479 AGYLDEAYAVIEN-MKLKPNEDVWTALLSA----CRLHRNVKLAVISAQKLFELNPDGVS 533
Query: 178 VKTALVDMYA---KCGLVKVARNLFEQLREKRVVSW-----NAMITGYAMHGHS-TKALD 228
L ++YA + V+ R L + R ++ S+ N M+ + + S ++ D
Sbjct: 534 GYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDD 593
Query: 229 LFEKMKD 235
++ K+KD
Sbjct: 594 IYAKLKD 600
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%), Gaps = 8/199 (4%)
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALSA-IEEGRRIHEDVIRNKWETDVFVGAALI 115
A++L+ + G + N L AC A+ + + I + ++ + F+ ++I
Sbjct: 41 ALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLK----NSFLWNSMI 96
Query: 116 DMYAKCSCVVNARQVFDKILE--RDPSEATLVTVISASADIAALPQGRELHGFSWRHRFE 173
YA + A ++ K+L + P T V+ A D+ GR++H E
Sbjct: 97 RGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLE 156
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
+V V +++ MY K G V+ AR +F+++ + + SWN M++G+ +G + A ++F M
Sbjct: 157 EDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDM 216
Query: 234 -KDEVQPDHITFVGVLSAC 251
+D D T + +LSAC
Sbjct: 217 RRDGFVGDRTTLLALLSAC 235
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 133/328 (40%), Gaps = 67/328 (20%)
Query: 146 TVISASADIAALPQGRELHG-FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE 204
T++ + + +L Q +LH + N + T L YA CG + A+++F+Q+
Sbjct: 27 TLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVL 86
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGR-- 261
K WN+MI GYA + ++AL L+ KM Q PD+ T+ VL AC L + GR
Sbjct: 87 KNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKV 146
Query: 262 ---------------------MFFE-------SMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
M+F+ +V D + + + M+ +G
Sbjct: 147 HALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEA 206
Query: 294 DEACDLIMQMR---VKPDPGVWGALLNSC----------KLHGHVKLAELALEKLIELEP 340
A ++ MR D ALL++C ++HG+V + E
Sbjct: 207 RGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYV---------VRNGES 257
Query: 341 HDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHP 400
N ++++I N E V+ RKL G++ SW ++ +SG +
Sbjct: 258 GRVCNGFLMNSIIDMYCNCESVSCARKLF--EGLRVKDVVSW-------NSLISG---YE 305
Query: 401 NCDEIYAKLKWLEGRMKEAGYVPGTESV 428
C + + L+ L GRM G VP +V
Sbjct: 306 KCGDAFQALE-LFGRMVVVGAVPDEVTV 332
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/548 (38%), Positives = 326/548 (59%), Gaps = 37/548 (6%)
Query: 1 MGFGFH--PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAI 58
+ FG P+++ L++LYS + Q+FD P+++ W+ +I A+A N +A+
Sbjct: 52 LKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLAL 111
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
+ + R+L G+ PD+ +P A KAC L + G+ +H ++ + DVFVG++L+DMY
Sbjct: 112 QFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMY 171
Query: 119 AKCSCVVNARQVFDKILER---------------------------------DPSEATLV 145
AKC + +AR +FD++ ER D ++ T
Sbjct: 172 AKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFS 231
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+VI + L G+ +HG + F+ + V +AL+ +Y+KCG+++ A +F+++ +
Sbjct: 232 SVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTR 291
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFF 264
+ WN+M+ A H H+ + LFE+M + ++P+ I+F+ VL ACS GL ++GR +F
Sbjct: 292 NLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYF 351
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
S++RDY I+P +HY +VDLLG +G+L EA +I QM ++P VWGALL C++H
Sbjct: 352 -SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKD 410
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
++A ++++E++ +G +V+LSN YA A +E A++RK++ DRG+KK SW+E
Sbjct: 411 TEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVE 470
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
NK H F +GD SH EIY KL+ LE M++AGYV T V V+ +EK I H
Sbjct: 471 EGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYH 530
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SERLAIAFGLI P G + + KNL++C DCH AIKF+SK R + VRD NR+H F+DG
Sbjct: 531 SERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDG 590
Query: 505 ICSCGDYW 512
CSCGDYW
Sbjct: 591 KCSCGDYW 598
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 4/184 (2%)
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+L QG +LH + + V L+++Y+K L + +F++ +K +W+++I+
Sbjct: 40 SLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVIS 99
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD-YHI 273
+A + AL F +M D V+PD + AC D G+ V+ Y+
Sbjct: 100 AFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYC 159
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
D V + +VD+ G + +A L +M + G + +L V+ L +
Sbjct: 160 DVFVG--SSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQ 217
Query: 334 KLIE 337
LIE
Sbjct: 218 ALIE 221
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/507 (42%), Positives = 309/507 (60%), Gaps = 15/507 (2%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T +V Y+ L A ++FD +P+RN WN ++ AY + A EL+ ++
Sbjct: 259 TAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELF------NMM 312
Query: 71 P--DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P + ++ L + +EE + + + + + D AA++ Y++ C
Sbjct: 313 PCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP----QKDAVSWAAMLAAYSQGGCSEETL 368
Query: 129 QVFDKILERDP--SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
Q+F ++ + + V+S ADIAAL G +LHG R + + V AL+ MY
Sbjct: 369 QLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMY 428
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFV 245
KCG ++ ARN FE++ E+ VVSWN MI GYA HG +AL++F+ M+ +PD IT V
Sbjct: 429 FKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLV 488
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
GVL+ACS GL ++G +F SM D+ + +HYTCM+DLLG +GRL EA DL+ M
Sbjct: 489 GVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPF 548
Query: 306 KPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKL 365
+PD +WGALL + ++H + +L A EK+ ELEP +AG YV+LSNIYA + W K+
Sbjct: 549 EPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKM 608
Query: 366 RKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGT 425
R +M +RG+KK SWIEV+NK H F +GD HP ++IYA L+ L+ RMK+AGYV T
Sbjct: 609 RVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSAT 668
Query: 426 ESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKI 485
+ V HDVE +EK +M+ HSE+LA+A+G++N P G + + KNL++C DCH A K+IS I
Sbjct: 669 DMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAI 728
Query: 486 TEREITVRDVNRYHHFKDGICSCGDYW 512
R I +RD NR+HHF+ G CSCGDYW
Sbjct: 729 EGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 158/345 (45%), Gaps = 34/345 (9%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+A +LF +P+R+ +N ++ Y+ NG +A L+ + PDN+++ L A +
Sbjct: 56 DAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPR----PDNYSYNTLLHALA 111
Query: 85 ALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEAT 143
S++ + R + +++ +R+ +V +I +A V AR FD E+D
Sbjct: 112 VSSSLADARGLFDEMPVRDSVTYNV-----MISSHANHGLVSLARHYFDLAPEKD----- 161
Query: 144 LVTVISASADIAA-LPQGR--ELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
+S + +AA + GR E G + R E +V AL+ Y + G + AR LF+
Sbjct: 162 ---AVSWNGMLAAYVRNGRVEEARGL-FNSRTEWDVISWNALMSGYVQWGKMSEARELFD 217
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEG 260
++ + VVSWN M++GYA G +A LF+ D T+ V+S ++ G+ +E
Sbjct: 218 RMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR---DVFTWTAVVSGYAQNGMLEEA 274
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
R F++M + + MV +DEA +L M + + W +L
Sbjct: 275 RRVFDAMPERNAVS-----WNAMVAAYIQRRMMDEAKELFNMMPCR-NVASWNTMLTGYA 328
Query: 321 LHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKL 365
G ++ A+ + + + DA ++ + Y++ E +L
Sbjct: 329 QAGMLEEAKAVFDTMPQ---KDAVSWAAMLAAYSQGGCSEETLQL 370
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 17/214 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+G + L+ +Y C + +A F+ + +R++ WN +I YA +G + A+E++
Sbjct: 413 GYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIF 472
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEG----RRIHEDV-IRNKWETDVFVGAALID 116
+ PD+ T L ACS +E+G +H D + K E +ID
Sbjct: 473 DMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYT----CMID 528
Query: 117 MYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL-- 174
+ + + A + K + +P ++ AS + + EL + FEL
Sbjct: 529 LLGRAGRLAEAHDLM-KDMPFEPDSTMWGALLGAS----RIHRNPELGRSAAEKIFELEP 583
Query: 175 -NVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
N + L ++YA G + AR + + E+ V
Sbjct: 584 ENAGMYVLLSNIYASSGKWRDARKMRVMMEERGV 617
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 37/213 (17%)
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
R E V + + + G V A LF + + ++NAM+ GY+ +G A LF
Sbjct: 33 RLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF 92
Query: 231 EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM-VRD---YHIDPSVQHYTCMVDL 286
+ +PD+ ++ +L A + + R F+ M VRD Y++ S +V L
Sbjct: 93 RAIP---RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSL 149
Query: 287 LGH----------------------SGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
H +GR++EA L R + D W AL++ G+
Sbjct: 150 ARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF-NSRTEWDVISWNALMS-----GY 203
Query: 325 VKLAEL--ALEKLIELEPHDAGNYVILSNIYAR 355
V+ ++ A E + D ++ I+ + YAR
Sbjct: 204 VQWGKMSEARELFDRMPGRDVVSWNIMVSGYAR 236
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/545 (39%), Positives = 316/545 (57%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF T L+ +YS L++AH+LFD IP R++ W L Y +G + AI+L+
Sbjct: 141 GFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLF 200
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+++E+G+ PD++ L AC + ++ G I + + + + + FV L+++YAKC
Sbjct: 201 KKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKC 260
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ AR VFD ++E+D P + ++V +
Sbjct: 261 GKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFL 320
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
S+ A + AL G RH F N+ + AL+DMYAKCG + +F++++EK +V
Sbjct: 321 SSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIV 380
Query: 209 SWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
NA I+G A +GH + +F + K + PD TF+G+L C GL +G FF ++
Sbjct: 381 IMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAI 440
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
Y + +V+HY CMVDL G +G LD+A LI M ++P+ VWGALL+ C+L +L
Sbjct: 441 SCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQL 500
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE L++LI LEP +AGNYV LSNIY+ W+ A++R +M +G+KK SWIE++
Sbjct: 501 AETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEG 560
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K H FL+ D SHP D+IYAKL+ L M+ G+VP TE VF DVE +EK ++ HSE+
Sbjct: 561 KVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEK 620
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+A GLI+T G + + KNL++C DCH +K ISKIT REI VRD NR+H F +G CS
Sbjct: 621 LAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCS 680
Query: 508 CGDYW 512
C DYW
Sbjct: 681 CNDYW 685
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 163/337 (48%), Gaps = 36/337 (10%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
++ LF N+FL+N LI + N + ++L+ + + GL FTFP LKAC+
Sbjct: 64 SYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTR 123
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
S+ + G +H V++ + DV +L+ +Y+ + +A ++FD+I +R
Sbjct: 124 ASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTAL 183
Query: 139 --------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
P +V V+SA + L G + +
Sbjct: 184 FSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEM 243
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
+ N V+T LV++YAKCG ++ AR++F+ + EK +V+W+ MI GYA + + ++LF +
Sbjct: 244 QKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQ 303
Query: 233 M-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
M ++ ++PD + VG LS+C+ G D G S++ + ++ ++D+ G
Sbjct: 304 MLQENLKPDQFSIVGFLSSCASLGALDLGEWGI-SLIDRHEFLTNLFMANALIDMYAKCG 362
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ ++ +M+ K D + A ++ +GHVKL+
Sbjct: 363 AMARGFEVFKEMKEK-DIVIMNAAISGLAKNGHVKLS 398
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/534 (42%), Positives = 311/534 (58%), Gaps = 47/534 (8%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDN------FTF 76
L +A +LFDR+PQR+ F W+ L+ Y +G E A+ LY R+ E P N FT
Sbjct: 111 LPSARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYRRMQE---EPGNDGADNEFTA 167
Query: 77 PFALKACSALSAIEEGRRIHEDVIRNKWET---DVFVGAALIDMYAKCSCVVNARQVFDK 133
AL A +A GR +H V+R + D + +AL DMYAKC V +AR+VFD+
Sbjct: 168 SSALAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDR 227
Query: 134 ILERD----------------------------------PSEATLVTVISASADIAALPQ 159
+ RD P+E T V+ A A A
Sbjct: 228 MPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESF 287
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
GR++HG + + ++AL+ MY+KCG + A +FE + + +VSW A+I+GYA
Sbjct: 288 GRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQ 347
Query: 220 HGHSTKALDLFEK-MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
+G +AL F+ ++ ++PDH+TFVGVLSAC+ GL D+G F S+ Y I+ +
Sbjct: 348 NGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTAD 407
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
HY C++DLL SG+ + A +I M VKP+ +W +LL C++H +V LA A E L E+
Sbjct: 408 HYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEI 467
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDAS 398
EP + YV L+NIYA ++ V +R++M +GI K A SWIEV + H FL GD S
Sbjct: 468 EPENPATYVTLANIYASVGLFDEVEDVRRIMESKGITKMPASSWIEVGRRVHVFLVGDKS 527
Query: 399 HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTP 458
HP DEIYA LK L +M E GYV E V HDVE+++K I HSERLA+AFG+I TP
Sbjct: 528 HPKADEIYALLKKLYVKMVEEGYVADIEFVLHDVEDEQKEQDIGYHSERLAVAFGIIATP 587
Query: 459 DGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+G+ + + KNL+IC DCH AIK IS+I +R+I VRD NR+HHFKDGICSC DYW
Sbjct: 588 EGSPIKVFKNLRICGDCHAAIKLISQIVQRDIIVRDSNRFHHFKDGICSCRDYW 641
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
+ L+ +YS C + +A ++F+ + + +L W +I YA NG E A+ + L G+
Sbjct: 308 SALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIK 367
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDV 99
PD+ TF L AC+ +++G I +
Sbjct: 368 PDHVTFVGVLSACAHAGLVDKGLEIFHSI 396
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/542 (40%), Positives = 306/542 (56%), Gaps = 36/542 (6%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
+P + T L+ LY+ C LH A ++FD +P + W LI AY G A+ +
Sbjct: 560 NPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAF 619
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G+ PD+FT L AC+ ++ + G + + VFV A +D+Y KC +
Sbjct: 620 ANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMA 679
Query: 126 NARQVFDKILERD----------------PSEA-----------------TLVTVISASA 152
AR+VFDK+ +D P EA + +SA
Sbjct: 680 KAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACT 739
Query: 153 DIAALPQGRE-LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+ AL GR+ + W F N + TAL+DMYAKCG A +F+Q+R+K ++ WN
Sbjct: 740 RLGALDLGRQAIRMVDW-DEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWN 798
Query: 212 AMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
AMI G M GH A L +M K V+ + TF+G+L +C+ GL +GR +F +M +
Sbjct: 799 AMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKL 858
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
YHI P ++HY CMVDLL +G L EA L+ M + + + GALL CK+H + +LAE
Sbjct: 859 YHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEH 918
Query: 331 ALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAH 390
L++LI LEP ++GNYV+LSNIY+ WE AKLR M +G++K ACSW+E + K H
Sbjct: 919 VLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVH 978
Query: 391 AFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAI 450
F GD SHP D+IY KL L MK GY P TE V DVE++EK + + HSE+LAI
Sbjct: 979 EFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAI 1038
Query: 451 AFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGD 510
AF L+ T G + +TKNL++C DCH AIK +S+IT REI VRD NR+H F+DG CSC D
Sbjct: 1039 AFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCND 1098
Query: 511 YW 512
YW
Sbjct: 1099 YW 1100
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 4/193 (2%)
Query: 138 DPSEATL-VTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
+PS T+ + + SAS L G +LH S + N V T+L+ +YAKCGL+ A+
Sbjct: 522 NPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQ 581
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK-MKDEVQPDHITFVGVLSACSRGG 255
+F+++ V W A+IT Y G +A+ + + ++PD T V VL+AC+R
Sbjct: 582 RVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIA 641
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
G + + ++ + SV T VDL G + +A ++ +MR K D WGA+
Sbjct: 642 DLATGETVWRAAEQE-GVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHK-DAVAWGAM 699
Query: 316 LNSCKLHGHVKLA 328
+ +GH + A
Sbjct: 700 VGGYASNGHPREA 712
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/573 (38%), Positives = 325/573 (56%), Gaps = 71/573 (12%)
Query: 11 TKLVHLYSACDCLHNAHQL--FDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
TKL+ + + D ++ L F ++ N FLW +IR YA G + Y R+ G
Sbjct: 78 TKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDG 137
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIH-EDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
+ P +FTF KAC A ++ G+++H + ++ + +D++VG ++ID+Y KC + A
Sbjct: 138 VGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCA 197
Query: 128 RQ-------------------------------VFDKILERD----------------PS 140
R+ +FD + +D P
Sbjct: 198 RKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPK 257
Query: 141 EA-----------------TLVTVISASADIAALPQGRELHGFSWRHRF--ELNVKVKTA 181
EA TL VISA A + A+ + + R F NV V +A
Sbjct: 258 EALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSA 317
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPD 240
L+DMY+KCG A +FE ++E+ V S+++MI GYAMHG + AL LF M K E++P+
Sbjct: 318 LIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPN 377
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
+TF+G+LSACS GL ++GR F M + + + PS HY CMVDLLG +G L+EA DL+
Sbjct: 378 KVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLV 437
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
M ++P+ GVWGALL +C++HG+ +A++A +L +LEP+ GNY++LSNIYA A WE
Sbjct: 438 KTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWE 497
Query: 361 GVAKLRKLMIDRGIKKSIACSWIEVKN-KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEA 419
V+KLRK++ ++G KK+ CSW E KN + H F +GD +HP EI LK L R++
Sbjct: 498 EVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSH 557
Query: 420 GYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAI 479
GY P S +D+ +DEK ++ HSE+LA+A+GL+ T G + I KN++IC+DCH +
Sbjct: 558 GYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVM 617
Query: 480 KFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
S+IT REI VRD R+HHF +G CSCG++W
Sbjct: 618 CAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 155/361 (42%), Gaps = 69/361 (19%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAY------------- 48
GF + ++ LY C L A ++FD + +R++ W LI AY
Sbjct: 173 GFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLF 232
Query: 49 ---------AW---------NGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIE 90
AW NG + A+E + ++ ++G+ D T + AC+ L A++
Sbjct: 233 DDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVK 292
Query: 91 EGRRIHEDVIRNKW--ETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVI 148
I + R+ + +V VG+ALIDMY+KC A +VF+ + ER+ V
Sbjct: 293 HANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERN--------VF 344
Query: 149 SASADIAALPQGRELHG--FSWRHRFELNVKV-----KTALVDMYAKC---GLVKVARNL 198
S S+ I G +HG S F +K K + + + C GLV+ R L
Sbjct: 345 SYSSMIL----GYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQL 400
Query: 199 FEQLREKRVVS-----WNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSR 253
F ++ + V+ + M+ G +ALDL + M ++P+ + +L AC
Sbjct: 401 FAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMP--MEPNGGVWGALLGACRI 458
Query: 254 GGLFDEGRMFFESMVRDYHIDPS-VQHYTCMVDLLGHSGRLDEACDL---IMQMRVKPDP 309
G D ++ + + ++P+ + +Y + ++ +GR +E L I + K +P
Sbjct: 459 HGNPDIAQIAANEL---FKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNP 515
Query: 310 G 310
G
Sbjct: 516 G 516
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/542 (40%), Positives = 306/542 (56%), Gaps = 36/542 (6%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
+P + T L+ LY+ C LH A ++FD +P + W LI AY G A+ +
Sbjct: 584 NPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAF 643
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G+ PD+FT L AC+ ++ + G + + VFV A +D+Y KC +
Sbjct: 644 ANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMA 703
Query: 126 NARQVFDKILERD----------------PSEA-----------------TLVTVISASA 152
AR+VFDK+ +D P EA + +SA
Sbjct: 704 KAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACT 763
Query: 153 DIAALPQGRE-LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+ AL GR+ + W F N + TAL+DMYAKCG A +F+Q+R+K ++ WN
Sbjct: 764 RLGALDLGRQAIRMVDW-DEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWN 822
Query: 212 AMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
AMI G M GH A L +M K V+ + TF+G+L +C+ GL +GR +F +M +
Sbjct: 823 AMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKL 882
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
YHI P ++HY CMVDLL +G L EA L+ M + + + GALL CK+H + +LAE
Sbjct: 883 YHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEH 942
Query: 331 ALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAH 390
L++LI LEP ++GNYV+LSNIY+ WE AKLR M +G++K ACSW+E + K H
Sbjct: 943 VLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVH 1002
Query: 391 AFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAI 450
F GD SHP D+IY KL L MK GY P TE V DVE++EK + + HSE+LAI
Sbjct: 1003 EFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAI 1062
Query: 451 AFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGD 510
AF L+ T G + +TKNL++C DCH AIK +S+IT REI VRD NR+H F+DG CSC D
Sbjct: 1063 AFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCND 1122
Query: 511 YW 512
YW
Sbjct: 1123 YW 1124
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 4/193 (2%)
Query: 138 DPSEATL-VTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
+PS T+ + + SAS L G +LH S + N V T+L+ +YAKCGL+ A+
Sbjct: 546 NPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQ 605
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK-MKDEVQPDHITFVGVLSACSRGG 255
+F+++ V W A+IT Y G +A+ + + ++PD T V VL+AC+R
Sbjct: 606 RVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIA 665
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
G + + ++ + SV T VDL G + +A ++ +MR K D WGA+
Sbjct: 666 DLATGETVWRAAEQE-GVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHK-DAVAWGAM 723
Query: 316 LNSCKLHGHVKLA 328
+ +GH + A
Sbjct: 724 VGGYASNGHPREA 736
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/583 (37%), Positives = 322/583 (55%), Gaps = 76/583 (13%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G HP+L KL Y++ LH++ LF R P N+FLW +I A+A + A+ Y
Sbjct: 50 GLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDLFHHALSYY 109
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDM---- 117
++L + P+ FT LKAC+ + R +H I+ + ++V L+D
Sbjct: 110 SQMLTHPIQPNAFTLSSLLKACT----LHPARAVHSHAIKFGLSSHLYVSTGLVDAYARG 165
Query: 118 ---------------------------YAKCSCVVNARQVFDKILERD------------ 138
YAK + AR +F+ + +D
Sbjct: 166 GDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYA 225
Query: 139 ----------------------------PSEATLVTVISASADIAALPQGRELHGFSWRH 170
P+E T+V V+S+ + AL G+ +H + +
Sbjct: 226 QHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENN 285
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
++NV+V TALVDMY KCG ++ AR +F+ + K VV+WN+MI GY +HG S +AL LF
Sbjct: 286 GIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLF 345
Query: 231 EKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGH 289
+M V+P ITFV VL+AC+ GL +G F+SM Y ++P V+HY CMV+LLG
Sbjct: 346 HEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGR 405
Query: 290 SGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVIL 349
+GR+ EA DL+ M V+PDP +WG LL +C++H +V L E E L+ +G YV+L
Sbjct: 406 AGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSNGLASSGTYVLL 465
Query: 350 SNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKL 409
SN+YA A NW GVAK+R +M G++K CS IEVKN+ H F++GD HP +IY+ L
Sbjct: 466 SNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIEVKNRVHEFVAGDRRHPRSKDIYSML 525
Query: 410 KWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNL 469
+ + G +KE Y P T++V HD+ EK + HSE+LA+AFGLI+T G + I KNL
Sbjct: 526 EKMNGWLKERHYTPKTDAVLHDIGEQEKEQSLEVHSEKLALAFGLISTSPGAAIKIVKNL 585
Query: 470 KICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++C DCH +K +SKI+ R+I +RD NR+HHF++G CSC DYW
Sbjct: 586 RVCLDCHAVMKIMSKISGRKIIMRDRNRFHHFENGSCSCRDYW 628
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/577 (36%), Positives = 326/577 (56%), Gaps = 65/577 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF P + T LV +Y+AC + A +FD++ R++ W+++I Y +G + A+ L
Sbjct: 151 LGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLL 210
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + + PD L AC + G+ IH+ ++ N D + +AL+ MYA
Sbjct: 211 FEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYAS 270
Query: 121 CSC-------------------------------VVNARQVFDKILERD----------- 138
C + NAR VF++++++D
Sbjct: 271 CGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGY 330
Query: 139 ----------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
P + T+++VI+A A + AL Q + +H F ++ F +
Sbjct: 331 AESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGAL 390
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE 236
+ AL++MYAKCG ++ AR +F+++ K V+SW MI+ +AMHG + AL F +M+DE
Sbjct: 391 PINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDE 450
Query: 237 -VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
++P+ ITFVGVL ACS GL +EGR F SM+ +++I P HY CMVDL G + L E
Sbjct: 451 NIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLRE 510
Query: 296 ACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYAR 355
A +L+ M + P+ +WG+L+ +C++HG ++L E A ++L+EL+P G +V LSNIYA+
Sbjct: 511 ALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAK 570
Query: 356 AANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGR 415
A WE V ++RKLM +GI K CS E+ N+ H FL D SH + DEIY KL + +
Sbjct: 571 ARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSK 630
Query: 416 MKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDC 475
+K GY P T S+ D+E +EK ++ HSE+LA+ +GL+ G+ + I KNL++C+DC
Sbjct: 631 LKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDGTGSCIRIIKNLRVCEDC 690
Query: 476 HIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
H IK SK+ EREI VRD R+HH+KDG+CSC DYW
Sbjct: 691 HTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 169/385 (43%), Gaps = 76/385 (19%)
Query: 9 LATKLVHLYSAC---DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
L KLV S+C L A +F+ IP+ L N +R + + E + +Y R+
Sbjct: 57 LLVKLV--ISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMR 114
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
GL D F+FP LKA S + ++ EG IH + +++D FV L+ MYA C +
Sbjct: 115 TQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIA 174
Query: 126 NARQVFDKILERD---------------------------------PSEATLVTVISASA 152
AR +FDK+ RD P E L TV+SA
Sbjct: 175 EARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACG 234
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE------------ 200
L G+ +H F + ++ +++ALV MYA CG + +A NLFE
Sbjct: 235 RAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTA 294
Query: 201 -------------------QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPD 240
Q+ +K +V W+AMI+GYA +AL+LF +M+ ++PD
Sbjct: 295 MVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPD 354
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
+T + V++AC+ G D+ + + V ++ ++++ G L+ A +
Sbjct: 355 QVTMLSVITACAHLGALDQAK-WIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIF 413
Query: 301 MQMRVKPDPGV--WGALLNSCKLHG 323
+M P V W ++++ +HG
Sbjct: 414 DKM---PRKNVISWTCMISAFAMHG 435
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/522 (39%), Positives = 316/522 (60%), Gaps = 35/522 (6%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL-LEIGLVPDNFTFPFALKACS 84
A Q+F++I N+F WN +IR +A + A+EL+ ++ ++PD TFPF KA +
Sbjct: 88 AAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVA 147
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------ 138
L + G IH V+RN +++ FV +L+ MY+ + +A QVF+ + RD
Sbjct: 148 KLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNS 207
Query: 139 ----------PSEA-----------------TLVTVISASADIAALPQGRELHGFSWRHR 171
P+EA T+V+++SA ++ AL G +H + +
Sbjct: 208 VINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVG 267
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
N AL+D+Y+KCG + A+ +F+++ E+ VVSW ++I G A++G +AL LF
Sbjct: 268 LVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFG 327
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+++ + ++P ITFVGVL ACS G+ DEG +F M +Y I P ++H+ CMVDLL +
Sbjct: 328 ELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRA 387
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
G++ +A D I M V P+ +W LL +C +HGH++L E+A ++ LE +G++V+LS
Sbjct: 388 GKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLS 447
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
N+YA W V +RK+M+ +G+KK+ S +E+KN+ + F+ GD SHP +E YA L
Sbjct: 448 NLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLA 507
Query: 411 WLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLK 470
+ +K GYVP T +V D+E +EK + H+E++AIAF L+NTP GT + I KNL+
Sbjct: 508 KITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLR 567
Query: 471 ICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+C DCH+AIK ISK+ EREI VRD +R+HHFKDG CSC DYW
Sbjct: 568 VCADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 124/269 (46%), Gaps = 15/269 (5%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + LVH+YS L +A+Q+F+ + R+ WN +I +A NG A+ LY
Sbjct: 166 GFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLY 225
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ PD FT L AC L A+ G R+H +++ + AL+D+Y+KC
Sbjct: 226 REMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKC 285
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRE-LHGFSWRHRFELNVKVKT 180
+A++VFD++ ER ++V+ S +A G E L F R L T
Sbjct: 286 GNFRDAQKVFDEMEER-----SVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEIT 340
Query: 181 ALVDMYA--KCGLVKVARNLFEQLREK-----RVVSWNAMITGYAMHGHSTKALDLFEKM 233
+ +YA CG++ N F +++E+ R+ M+ G A D M
Sbjct: 341 FVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNM 400
Query: 234 KDEVQPDHITFVGVLSACSRGGLFDEGRM 262
V P+ + + +L AC+ G + G +
Sbjct: 401 P--VPPNAVIWRTLLGACTIHGHLELGEV 427
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/539 (38%), Positives = 319/539 (59%), Gaps = 36/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ +YS C C+ A +FD++ ++L W +I AYA N + A++L ++ G
Sbjct: 250 IGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKG 309
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D L ACS L + + +H ++ + +D+ + +ID+YA C + A
Sbjct: 310 MDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLK-RGLSDLMMQNMIIDVYADCGNINYAT 368
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
++F+ I +D P TLV+++SA+A ++
Sbjct: 369 RMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLS 428
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL +G+E+HGF +R F L +LVDMYA CG ++ A +F R K +V W MI
Sbjct: 429 ALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMIN 488
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
Y MHG A++LF M+D+ + PDHITF+ +L ACS GL +EG+ E+M Y ++
Sbjct: 489 AYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLE 548
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P +HY C+VDLLG + L+EA + M+++P VW A L +C++H + KL E+A +K
Sbjct: 549 PWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQK 608
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L++L+P G+YV++SN++A + W+ V ++R M G+KK+ CSWIEV NK H FL
Sbjct: 609 LLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLV 668
Query: 395 GDASHPNCDEIYAKLKWLEGRM-KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
D SHP +IY KL + ++ KE GYVP T+ V H+V +EK M+ HSERLAIA+G
Sbjct: 669 RDKSHPESYKIYQKLAQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLAIAYG 728
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L++T +GT + ITKNL++C DCH K +SK ERE+ VRD +R+HHF+DG+CSCGD+W
Sbjct: 729 LMSTSEGTPIRITKNLRVCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVCSCGDFW 787
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 171/355 (48%), Gaps = 39/355 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A LV ++ + A ++FD + +++ WN +I + NG Y A++ + L +
Sbjct: 149 VANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDAN 208
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L PD + L A L + G+ IH ++N ++++ +G LIDMY+KC CV A
Sbjct: 209 LKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAG 268
Query: 129 QVFDKILERDPSEATLV---------------------------------TVISASADIA 155
VFDK++ +D T V + + A + +
Sbjct: 269 LVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLR 328
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L +E+HG++ + ++ ++ ++D+YA CG + A +FE ++ K VVSW +MI+
Sbjct: 329 CLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMIS 387
Query: 216 GYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD-YHI 273
Y +G + +AL +F MK+ V+PD IT V +LSA + ++G+ + R + +
Sbjct: 388 CYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFML 447
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ S +VD+ G L+ A + + R K +W ++N+ +HG K A
Sbjct: 448 EGST--VNSLVDMYACCGSLENAYKVFICTRSKSLV-LWTTMINAYGMHGRGKAA 499
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 179/370 (48%), Gaps = 42/370 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRN-LFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+A LV +Y+ C+ + A +LFDR+ +RN + WN +I AY+ NG A+ L+ + +
Sbjct: 47 VANSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKA 106
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ + +T AL+AC S + G IH ++++ DV+V AL+ M+ + + A
Sbjct: 107 GVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYA 166
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
++FD++ E+D P E +L+++++AS +
Sbjct: 167 ARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRL 226
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L G+E+H ++ ++ + N+++ L+DMY+KC V A +F+++ K ++SW +I
Sbjct: 227 GYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVI 286
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
YA + T+AL L K++ + + D + L ACS + ++
Sbjct: 287 AAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS 346
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV---KLAEL 330
D +Q+ ++D+ G ++ A + ++ K D W +++ SC +H + L
Sbjct: 347 DLMMQNM--IIDVYADCGNINYATRMFESIKCK-DVVSWTSMI-SCYVHNGLANEALGVF 402
Query: 331 ALEKLIELEP 340
L K +EP
Sbjct: 403 YLMKETSVEP 412
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 128/255 (50%), Gaps = 36/255 (14%)
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
+G+ D+FTFP LKAC + I G IH +I+ +++ VFV +L+ MYAKC+ ++
Sbjct: 4 LGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILG 63
Query: 127 ARQVFDKILERD----------------------------------PSEATLVTVISASA 152
AR++FD++ ER+ + TLV + A
Sbjct: 64 ARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACE 123
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
D + G E+H + L+V V ALV M+ + G + A +F++L EK ++WN+
Sbjct: 124 DSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNS 183
Query: 213 MITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
MI G+ +G +AL F ++D ++PD ++ + +L+A R G G+ ++++
Sbjct: 184 MIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNW 243
Query: 272 HIDPSVQHYTCMVDL 286
+D +++ ++D+
Sbjct: 244 -LDSNLRIGNTLIDM 257
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 4/141 (2%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF LV +Y+ C L NA+++F ++L LW +I AY +G + A+EL+
Sbjct: 444 GFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELF 503
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMYA 119
+ + L+PD+ TF L ACS I EG+R+ E ++ K++ + + A L+D+
Sbjct: 504 SIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLE-TMKCKYQLEPWPEHYACLVDLLG 562
Query: 120 KCSCVVNARQVFDKILERDPS 140
+ + + A F K ++ +P+
Sbjct: 563 RANHLEEAYH-FVKSMQIEPT 582
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/521 (39%), Positives = 306/521 (58%), Gaps = 12/521 (2%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + LV +Y C L A + D + +R++ WN L+ YA N ++ A+E+
Sbjct: 169 VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEV 228
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + + D T L A S + E +D+ + + +I +Y K
Sbjct: 229 CREMESVKISHDAGTMASLLPAVS--NTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMK 286
Query: 121 CSCVVNARQVFDKILERD---PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
+ V A +++ + +E D P ++ +V+ A D +AL G+++HG+ R + N+
Sbjct: 287 NAMPVEAVELYSR-MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE- 236
++ AL+DMYAKCG ++ AR++FE ++ + VVSW AMI+ Y G A+ LF K++D
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+ PD I FV L+ACS GL +EGR F+ M Y I P ++H CMVDLLG +G++ EA
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 465
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARA 356
I M ++P+ VWGALL +C++H + LA +KL +L P +G YV+LSNIYA+A
Sbjct: 466 YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKA 525
Query: 357 ANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRM 416
WE V +R +M +G+KK+ S +EV H FL GD SHP DEIY +L L +M
Sbjct: 526 GRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKM 585
Query: 417 KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPD-----GTRLLITKNLKI 471
KE GYVP +ES HDVE ++K + HSE+LAI F L+NT + + ITKNL+I
Sbjct: 586 KELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRI 645
Query: 472 CDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
C DCH+A K IS+IT REI +RD NR+H F+ G+CSCGDYW
Sbjct: 646 CGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 160/318 (50%), Gaps = 7/318 (2%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L KL+ Y++ + +A ++FD IP+RN+ + NV+IR+Y NG Y ++++ +
Sbjct: 76 LGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD++TFP LKACS I GR+IH + + +FVG L+ MY KC + AR
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 195
Query: 129 QVFDKILERD-PSEATLVTVISASADI-AALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
V D++ RD S +LV + + AL RE+ H + A+ +
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 255
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFV 245
+ V +++F ++ +K +VSWN MI Y + +A++L+ +M+ D +PD ++
Sbjct: 256 TEN--VMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSIT 313
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
VL AC G+ + R I P++ ++D+ G L++A D+ M+
Sbjct: 314 SVLPACGDTSALSLGKKIHGYIERKKLI-PNLLLENALIDMYAKCGCLEKARDVFENMKS 372
Query: 306 KPDPGVWGALLNSCKLHG 323
+ D W A++++ G
Sbjct: 373 R-DVVSWTAMISAYGFSG 389
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 106/254 (41%), Gaps = 18/254 (7%)
Query: 136 ERDPSEATLV--TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVK 193
++ P E + V+ DI L R +H N + L+ YA V
Sbjct: 35 QKSPQETVFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVA 91
Query: 194 VARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACS 252
AR +F+++ E+ V+ N MI Y +G + + +F M V+PDH TF VL ACS
Sbjct: 92 SARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACS 151
Query: 253 RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
G GR S + + ++ +V + G G L EA L++ + D W
Sbjct: 152 CSGTIVIGRKIHGSATK-VGLSSTLFVGNGLVSMYGKCGFLSEA-RLVLDEMSRRDVVSW 209
Query: 313 GALLNSCKLHGHVKLAELALEKLIELE----PHDAGNYVILSNIYARAANWEGVAKLRKL 368
+L+ + + + ALE E+E HDAG L + E V ++ +
Sbjct: 210 NSLVVG---YAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTT-ENVMYVKDM 265
Query: 369 MIDRGIKKSIACSW 382
G KKS+ SW
Sbjct: 266 FFKMG-KKSLV-SW 277
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/546 (37%), Positives = 316/546 (57%), Gaps = 35/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + + L +YS C L +A + F+ +P ++ LW +I + NG ++ A+ Y
Sbjct: 206 GFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAY 265
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+++ + D L ACSAL A G+ +H +++ +E + F+G AL DMY+K
Sbjct: 266 MKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKS 325
Query: 122 SCVVNARQVF----------------DKILERD------------------PSEATLVTV 147
+V+A VF D +E D P+E T ++
Sbjct: 326 GDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSL 385
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
I A A+ A L G +LHG + F+ + V + LVDMY KCGL + LF+++
Sbjct: 386 IKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDE 445
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
++WN ++ ++ HG A++ F M ++P+ +TFV +L CS G+ ++G +F S
Sbjct: 446 IAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSS 505
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M + Y + P +HY+C++DLLG +G+L EA D I M +P+ W + L +CK+HG ++
Sbjct: 506 MEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDME 565
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
A+ A +KL++LEP ++G +V+LSNIYA+ WE V LRK++ D + K SW++++
Sbjct: 566 RAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIR 625
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
NK H F D SHP EIY KL L ++K GYVP TESV D++++ K ++ HSE
Sbjct: 626 NKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQTESVLIDMDDNLKEKLLHYHSE 685
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
R+A+AF L+ P G +++ KNL++C DCH A+KFISK+TER I VRD++R+HHF +G C
Sbjct: 686 RIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVTERNIIVRDISRFHHFSNGSC 745
Query: 507 SCGDYW 512
SCGDYW
Sbjct: 746 SCGDYW 751
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 162/351 (46%), Gaps = 39/351 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L+ ++LYS C L +LFD++ QRN+ W +I +A N ++ A+ + ++ G
Sbjct: 112 LSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEG 171
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ F L+AC++L AI+ G ++H V++ + ++FVG+ L DMY+KC + +A
Sbjct: 172 EIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDAC 231
Query: 129 QVFDKILERDP---------------------------------SEATLVTVISASADIA 155
+ F+++ +D + L + +SA + +
Sbjct: 232 KAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALK 291
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE-KRVVSWNAMI 214
A G+ LH + FE + AL DMY+K G + A N+F+ + +VS A+I
Sbjct: 292 ASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAII 351
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYH 272
GY KAL F ++ ++P+ TF ++ AC+ + G +V+ ++
Sbjct: 352 DGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFK 411
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
DP V + +VD+ G G D + L ++ PD W L+ HG
Sbjct: 412 RDPFVS--STLVDMYGKCGLFDHSIQLFDEIE-NPDEIAWNTLVGVFSQHG 459
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 34/217 (15%)
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
+ D T ++ + + +G+++H +IR + F+ +++Y+KC + +
Sbjct: 72 LSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIK 131
Query: 130 VFDKILERD---------------------------------PSEATLVTVISASADIAA 156
+FDK+ +R+ ++ L +V+ A + A
Sbjct: 132 LFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGA 191
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
+ G ++H + F + V + L DMY+KCG + A FE++ K V W +MI G
Sbjct: 192 IQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDG 251
Query: 217 YAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACS 252
+ +G KAL + KM D+V D LSACS
Sbjct: 252 FVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACS 288
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 3/195 (1%)
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T+ +I A L +G++LH R N + +++Y+KCG + LF+++
Sbjct: 77 TVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKM 136
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGR 261
++ +VSW ++ITG+A + +AL F +M+ E + VL AC+ G G
Sbjct: 137 SQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGT 196
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
+V + + + D+ G L +AC +M K D +W ++++
Sbjct: 197 Q-VHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCK-DAVLWTSMIDGFVK 254
Query: 322 HGHVKLAELALEKLI 336
+G K A A K++
Sbjct: 255 NGDFKKALTAYMKMV 269
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/507 (42%), Positives = 309/507 (60%), Gaps = 15/507 (2%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T +V Y+ L A ++FD +P+RN WN ++ AY + A EL+ ++
Sbjct: 134 TAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELF------NMM 187
Query: 71 P--DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P + ++ L + +EE + + + + + D AA++ Y++ C
Sbjct: 188 PCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP----QKDAVSWAAMLAAYSQGGCSEETL 243
Query: 129 QVFDKILERDP--SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
Q+F ++ + + V+S ADIAAL G +LHG R + + V AL+ MY
Sbjct: 244 QLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMY 303
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFV 245
KCG ++ ARN FE++ E+ VVSWN MI GYA HG +AL++F+ M+ +PD IT V
Sbjct: 304 FKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLV 363
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
GVL+ACS GL ++G +F SM D+ + +HYTCM+DLLG +GRL EA DL+ M
Sbjct: 364 GVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPF 423
Query: 306 KPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKL 365
+PD +WGALL + ++H + +L A EK+ ELEP +AG YV+LSNIYA + W K+
Sbjct: 424 EPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKM 483
Query: 366 RKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGT 425
R +M +RG+KK SWIEV+NK H F +GD HP ++IYA L+ L+ RMK+AGYV T
Sbjct: 484 RVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSAT 543
Query: 426 ESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKI 485
+ V HDVE +EK +M+ HSE+LA+A+G++N P G + + KNL++C DCH A K+IS I
Sbjct: 544 DMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAI 603
Query: 486 TEREITVRDVNRYHHFKDGICSCGDYW 512
R I +RD NR+HHF+ G CSCGDYW
Sbjct: 604 EGRLILLRDSNRFHHFRGGSCSCGDYW 630
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 107/244 (43%), Gaps = 17/244 (6%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A FD P+++ WN ++ AY NG E A L+ E D ++ +
Sbjct: 25 ARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEW----DVISWNALMSGYVQ 80
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLV 145
+ E R + + + DV ++ YA+ +V AR++FD RD T
Sbjct: 81 WGKMSEARELFDRMPGR----DVVSWNIMVSGYARRGDMVEARRLFDAAPVRDV--FTWT 134
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
V+S A L + R + + E N A+V Y + ++ A+ LF + +
Sbjct: 135 AVVSGYAQNGMLEEARRV----FDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR 190
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V SWN M+TGYA G +A +F+ M Q D +++ +L+A S+GG +E F
Sbjct: 191 NVASWNTMLTGYAQAGMLEEAKAVFDTMP---QKDAVSWAAMLAAYSQGGCSEETLQLFI 247
Query: 266 SMVR 269
M R
Sbjct: 248 EMGR 251
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 138/313 (44%), Gaps = 29/313 (9%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
+ A LF+ + ++ WN L+ Y G A EL+ R+ +V N +
Sbjct: 53 VEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIM----VSG 108
Query: 83 CSALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSE 141
+ + E RR+ + +R DVF A++ YA+ + AR+VFD + ER+
Sbjct: 109 YARRGDMVEARRLFDAAPVR-----DVFTWTAVVSGYAQNGMLEEARRVFDAMPERN--- 160
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRHRFEL----NVKVKTALVDMYAKCGLVKVARN 197
+S +A +AA Q R + + F + NV ++ YA+ G+++ A+
Sbjct: 161 -----AVSWNAMVAAYIQRRMMD--EAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKA 213
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGL 256
+F+ + +K VSW AM+ Y+ G S + L LF +M + + F VLS C+
Sbjct: 214 VFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAA 273
Query: 257 FDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
+ G ++R Y + V + ++ + G +++A + +M + D W +
Sbjct: 274 LECGMQLHGRLIRAGYGVGCFVGN--ALLAMYFKCGNMEDARNAFEEMEER-DVVSWNTM 330
Query: 316 LNSCKLHGHVKLA 328
+ HG K A
Sbjct: 331 IAGYARHGFGKEA 343
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 18/252 (7%)
Query: 114 LIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFE 173
+I +A V AR FD E+D + +++A + + R L + R E
Sbjct: 12 MISSHANHGLVSLARHYFDLAPEKDA--VSWNGMLAAYVRNGRVEEARGL----FNSRTE 65
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
+V AL+ Y + G + AR LF+++ + VVSWN M++GYA G +A LF+
Sbjct: 66 WDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAA 125
Query: 234 KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
D T+ V+S ++ G+ +E R F++M + + + MV +
Sbjct: 126 PVR---DVFTWTAVVSGYAQNGMLEEARRVFDAMP-----ERNAVSWNAMVAAYIQRRMM 177
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIY 353
DEA +L M + + W +L G ++ A+ + + + DA ++ + Y
Sbjct: 178 DEAKELFNMMPCR-NVASWNTMLTGYAQAGMLEEAKAVFDTMPQ---KDAVSWAAMLAAY 233
Query: 354 ARAANWEGVAKL 365
++ E +L
Sbjct: 234 SQGGCSEETLQL 245
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 17/214 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+G + L+ +Y C + +A F+ + +R++ WN +I YA +G + A+E++
Sbjct: 288 GYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIF 347
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEG----RRIHEDV-IRNKWETDVFVGAALID 116
+ PD+ T L ACS +E+G +H D + K E +ID
Sbjct: 348 DMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYT----CMID 403
Query: 117 MYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL-- 174
+ + + A + K + +P ++ AS + + EL + FEL
Sbjct: 404 LLGRAGRLAEAHDLM-KDMPFEPDSTMWGALLGAS----RIHRNPELGRSAAEKIFELEP 458
Query: 175 -NVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
N + L ++YA G + AR + + E+ V
Sbjct: 459 ENAGMYVLLSNIYASSGKWRDARKMRVMMEERGV 492
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/583 (38%), Positives = 332/583 (56%), Gaps = 72/583 (12%)
Query: 2 GFGFHPVLATKL--VHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYA-WNGPYEVAI 58
G HP+ A KL V + S+ L AHQLFD+IP+ ++F++N +I+A+A ++
Sbjct: 42 GLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPDVFIYNTMIKAHAVIPTSSHNSM 101
Query: 59 ELYYRLLEI-GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDM 117
++ ++ + G +P+ +TF F KAC + EG +I I+ E+++FV A+I M
Sbjct: 102 RIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRM 161
Query: 118 YAKCSCVVNARQVF-------------------------------DKILERD-------- 138
YA V AR+VF D++ ERD
Sbjct: 162 YANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTII 221
Query: 139 -------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFE 173
P+E TL + ++A A++ AL QGR +H + + +
Sbjct: 222 AGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIK 281
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLF--EQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
+N ++ +L+DMYAKCG + A +F E + +V WNAMI GYAMHG S +A+DLFE
Sbjct: 282 MNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFE 341
Query: 232 KMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+MK ++V P+ +TFV +L+ACS G L +EGR +F+SM Y I+P ++HY CMVDLLG S
Sbjct: 342 QMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRS 401
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
G L EA + + M + PD +WGALL +C++H ++ + + + EL+ G +V+L+
Sbjct: 402 GLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLA 461
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
N+Y+ + W+ +R+ + G KK+ CS IE+ H FL GD SHP ++Y L
Sbjct: 462 NLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLD 521
Query: 411 WLEGRMKEAGYVPGTESVFHDVENDE-KANMICCHSERLAIAFGLINTPDGTRLLITKNL 469
+ ++K AGYVP V D++++E K + HSE+LAIAFGLINTP GT + I KNL
Sbjct: 522 EMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNL 581
Query: 470 KICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++C DCH A KFISK+ +REI VRD RYHHFKDG CSC DYW
Sbjct: 582 RVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 624
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/546 (38%), Positives = 319/546 (58%), Gaps = 35/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + T LV +YS C+ A QLF+ + +RN+ WN ++ Y+ +G E AI+L+
Sbjct: 152 GFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLF 211
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ GL+ D +T + A ++ ++ G IH +IR +E D + AL+D+Y
Sbjct: 212 NLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSH 271
Query: 122 SCVVNARQVFDKILERDPSEATLVT----------------------------------V 147
+CV +A +VF ++ +D + TL+ +
Sbjct: 272 NCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGI 331
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+S+ + AL QGR +H + + F N+ V +A++DMYA CG ++ A+ F + EK V
Sbjct: 332 LSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDV 391
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V WNAMI G M+G+ T A+DLF +MK + PD TFV VL ACS G+ EG F
Sbjct: 392 VCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYH 451
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
MV+ H+ P++QHY C++D+LG +G+LD A I M +PD V+ LL +C++HG++K
Sbjct: 452 MVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIK 511
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
L +K+ E+EP+DAG YV+LSN+YA A NWEGV R + + +KK S IE+
Sbjct: 512 LGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEIN 571
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
+ + F++G+ HP +I LK L ++K+AGYVP T + DV +D K +++ HSE
Sbjct: 572 QEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSE 631
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
++AIAFGL+ T T + ITKNL+ CDDCH A KF+SK+ R + ++D NR+H F+DG+C
Sbjct: 632 KMAIAFGLMRTKPETIIRITKNLRTCDDCHTASKFVSKVFGRVLVIKDANRFHVFQDGVC 691
Query: 507 SCGDYW 512
SC DYW
Sbjct: 692 SCRDYW 697
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 174/392 (44%), Gaps = 68/392 (17%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + L+ L++ Y C L +A Q+F P +N+ W +LI A N + AI+++
Sbjct: 51 GLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVF 110
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ P+ T L A + L I + +H +R +E +VFV AL+DMY+K
Sbjct: 111 REMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKF 170
Query: 122 SCVVNARQVFDKILERD----------------PSEA-----------------TLVTVI 148
C+ ARQ+F+ + ER+ EA T++++I
Sbjct: 171 GCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLI 230
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
AS + L G +HGF R +E + +KTAL+D+Y V A +F ++ K V
Sbjct: 231 PASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVA 290
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMK--DEVQPDHITFVGVLSACSRGGLFDEGR----- 261
+W M+TG++ H +A+ F KM ++ D I +G+LS+CS G +GR
Sbjct: 291 AWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHAL 350
Query: 262 ---------MFFESMVRDYHID----------------PSVQHYTCMVDLLGHSGRLDEA 296
+F S V D + + V + M+ G +G +A
Sbjct: 351 AIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDA 410
Query: 297 CDLIMQMR---VKPDPGVWGALLNSCKLHGHV 325
DL +QM+ + PD + ++L +C G V
Sbjct: 411 IDLFLQMKGSGLDPDESTFVSVLYACSHAGMV 442
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/539 (38%), Positives = 319/539 (59%), Gaps = 35/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL-LEI 67
+ +LV +Y +A +LFD +P ++L WN L+ + G + + R+ E
Sbjct: 156 IGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTES 215
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G P+ T + AC+ + A++EG+ +H V++ V +LI+MY K + A
Sbjct: 216 GRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAA 275
Query: 128 RQVFDKILER---------------------------------DPSEATLVTVISASADI 154
Q+F+++ R +P +AT+V ++ A D
Sbjct: 276 SQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDT 335
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
Q +H + R F ++ + TAL+++YAK G + + ++FE+++++ ++W AM+
Sbjct: 336 GLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAML 395
Query: 215 TGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
GYA+H +A+ LF+ M K+ V+ DH+TF +LSACS GL +EG+ +FE M Y +
Sbjct: 396 AGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRV 455
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
+P + HY+CMVDLLG SGRL++A +LI M ++P GVWGALL +C+++G+V+L + E
Sbjct: 456 EPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAE 515
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
+L+ L+P D NY++LSNIY+ A W +K+R LM +R + ++ CS+IE NK H F+
Sbjct: 516 QLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFV 575
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD HP DEI+ KL+ L +++EAG P TE V HD++ + K +MI HSE+LAIAFG
Sbjct: 576 VGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFG 635
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+ T G L+ITKNL+IC DCH KF S + +R I +RD R+HHF DG+CSC DYW
Sbjct: 636 LLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 694
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 143/319 (44%), Gaps = 16/319 (5%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + L+++Y L A QLF+ +P R+L WN ++ + NG E ++L
Sbjct: 250 LGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDL 309
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + G+ PD T L+AC+ + IH + R + D+ + AL+++YAK
Sbjct: 310 FNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAK 369
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
+ + +F++I +RD +++ A A + +L + E++ T
Sbjct: 370 LGRLNASEDIFEEIKDRD--RIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFT 427
Query: 181 ALVDMYAKCGLVKVARNLFEQLR-----EKRVVSWNAMITGYAMHGHSTKALDLFEKMKD 235
L+ + GLV+ + FE + E R+ ++ M+ G A +L + M
Sbjct: 428 HLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMP- 486
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV-QHYTCMVDLLGHSGRLD 294
++P + +L AC G + G+ E ++ +DPS ++Y + ++ +G
Sbjct: 487 -MEPSSGVWGALLGACRVYGNVELGKEVAEQLL---SLDPSDHRNYIMLSNIYSAAGLWR 542
Query: 295 EACD---LIMQMRVKPDPG 310
+A L+ + R+ +PG
Sbjct: 543 DASKVRALMKERRLTRNPG 561
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/548 (38%), Positives = 325/548 (59%), Gaps = 37/548 (6%)
Query: 1 MGFGFH--PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAI 58
+ FG P+++ L++LYS + Q+FD P+++ W+ +I A+A N +A+
Sbjct: 52 LKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLAL 111
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
+ + R+L G+ PD+ +P A KAC L + G+ +H ++ + DVFVG++L+DMY
Sbjct: 112 QFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMY 171
Query: 119 AKCSCVVNARQVFDKILER---------------------------------DPSEATLV 145
AKC + +AR +FD++ ER D ++ T
Sbjct: 172 AKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFS 231
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+VI + L G+ +HG + F+ + V +AL+ +Y+KCG+++ A +F+++ +
Sbjct: 232 SVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTR 291
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFF 264
+ WN+M+ A H H+ + LFE+M + ++P+ I F+ VL ACS GL ++GR +F
Sbjct: 292 NLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYF 351
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
S++RDY I+P +HY +VDLLG +G+L EA +I QM ++P VWGALL C++H
Sbjct: 352 -SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKD 410
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
++A ++++E++ +G +V+LSN YA A +E A++RK++ DRG+KK SW+E
Sbjct: 411 TEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVE 470
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
NK H F +GD SH EIY KL+ LE M++AGYV T V V+ +EK I H
Sbjct: 471 EGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYH 530
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SERLAIAFGLI P G + + KNL++C DCH AIKF+SK R + VRD NR+H F+DG
Sbjct: 531 SERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDG 590
Query: 505 ICSCGDYW 512
CSCGDYW
Sbjct: 591 KCSCGDYW 598
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 4/184 (2%)
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+L QG +LH + + V L+++Y+K L + +F++ +K +W+++I+
Sbjct: 40 SLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVIS 99
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD-YHI 273
+A + AL F +M D V+PD + AC D G+ V+ Y+
Sbjct: 100 AFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYC 159
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
D V + +VD+ G + +A L +M + G + +L V+ L +
Sbjct: 160 DVFVG--SSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQ 217
Query: 334 KLIE 337
LIE
Sbjct: 218 ALIE 221
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/546 (39%), Positives = 321/546 (58%), Gaps = 42/546 (7%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ P L L+++Y L A LFD +P RN+ W +I AY+ + A++
Sbjct: 46 GYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFL 105
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+L G+ P+ +T+ L+AC L + R++H +++ E+DVFV +ALID Y+K
Sbjct: 106 ILMLREGVRPNMYTYSSVLRACDGLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKL 162
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+A VF++++ D ++TL +V+
Sbjct: 163 GEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVL 222
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL-REKRV 207
A +A L GR++H + ++ ++ + AL+DMY KCG ++ A LF ++ EK V
Sbjct: 223 RACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDV 280
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
+SW+ MI G A +G S AL LFE MK + +P++IT +GVL ACS GL ++G +F+S
Sbjct: 281 ISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQS 340
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M + IDP +HY C++DLLG +G+LDEA LI +M +PD W LL +C++H +V
Sbjct: 341 MKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVD 400
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
LA A +++++L+P DAG Y++LSNIYA + WE VA++R+ M RG+KK CSWIEV
Sbjct: 401 LAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVS 460
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
+ HAF+ GD SHP +EI +L L R+ GYVP T V D+E ++ + + HSE
Sbjct: 461 KQVHAFILGDNSHPRIEEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSE 520
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LAI FGL++ P+ + I KNL+IC DCHI K +S++ R I +RD RYHHF+ G+C
Sbjct: 521 KLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGVC 580
Query: 507 SCGDYW 512
SCGDYW
Sbjct: 581 SCGDYW 586
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 131/288 (45%), Gaps = 38/288 (13%)
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L D T+ +K C A+++ R +HE V N +E F+ LI+MY K + AR
Sbjct: 12 LSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEAR 71
Query: 129 QVFDKILERDPSEATLVTVISASAD-----------IAALPQG----------------- 160
+FD++ +R+ T T+ISA ++ I L +G
Sbjct: 72 NLFDEMPDRNVVSWT--TMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDG 129
Query: 161 ----RELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
R+LHG + E +V V++AL+D Y+K G A N+F ++ +V WN++I G
Sbjct: 130 LLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGG 189
Query: 217 YAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
+A + + L L+++MK + D T VL AC+ L + GR +++ D
Sbjct: 190 FAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK---YDQ 246
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+ ++D+ G L++A L +M + D W ++ +G
Sbjct: 247 DLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNG 294
>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 597
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/540 (40%), Positives = 319/540 (59%), Gaps = 38/540 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNG-PYEVAIEL 60
GF L T+L+ + A Q+FD +P+ +FLWN L + Y N P+E ++ L
Sbjct: 38 GFSEKNSLLTQLLENLVLVGDMCYARQVFDEMPKPRIFLWNTLFKGYVRNQLPFE-SVLL 96
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
Y ++ ++G+ PD FT+PF +KA S L + G +H V++N +E V L+ MY K
Sbjct: 97 YKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHAHVLKNGFECLGIVATELVMMYMK 156
Query: 121 CSCVVNARQVFDKILERDP---------------------------------SEATLVTV 147
+ +A +F+ + +D T+V++
Sbjct: 157 FGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSM 216
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+SA + +L G E++ + + E N+ V+ A +DM+ KCG + AR LF+ ++++ V
Sbjct: 217 LSACGQLGSLDIGEEIYDRARKEEIECNIIVENARLDMHLKCGSTEAARVLFDDMKQRNV 276
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSW+ MI GYAM+G S +AL LF M++E ++P+++TF+GVLSACS GL +EG+ +F
Sbjct: 277 VSWSTMIVGYAMNGDSGEALALFTMMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSL 336
Query: 267 MVR--DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
MVR D +++P +HY CMVDLLG SG L+EA + I +MRV+PD G+WGALL +C +H
Sbjct: 337 MVRLNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMRVEPDTGIWGALLGACAVHRD 396
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
+ L + + L+E P +V+LSNIYA A W+ V K+R M G KK A S +E
Sbjct: 397 MILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVE 456
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
K H F GD SHP IY KL + +++ GYVP T SVFHDVE +EK + + H
Sbjct: 457 FDGKIHFFNRGDISHPQSKAIYEKLDEILKKIRNMGYVPDTGSVFHDVEMEEKESSLSHH 516
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SE+LAIAFGLIN G + + KNL+ CDDCH+ KF+S++T REI +RD NR+HHF++G
Sbjct: 517 SEKLAIAFGLINGRAGHPIRVMKNLRTCDDCHVFSKFVSRLTSREIIMRDKNRFHHFRNG 576
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 102/226 (45%), Gaps = 6/226 (2%)
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
Q +++H R F + T L++ G + AR +F+++ + R+ WN + GY
Sbjct: 26 QLKKIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFDEMPKPRIFLWNTLFKGYV 85
Query: 219 MHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
+ +++ L++KM+D V+PD T+ V+ A S+ G+ G ++++ +
Sbjct: 86 RNQLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHAHVLKNGFECLGI 145
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
T +V + G L A L M+VK D W A + C G+ +A K+
Sbjct: 146 VA-TELVMMYMKFGELSSAEFLFESMQVK-DLVAWNAFIAVCVQTGNSAIALEYFNKMCA 203
Query: 338 LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
+ ++ ++S + A G + + + DR K+ I C+ I
Sbjct: 204 -DAVQFDSFTVVSML--SACGQLGSLDIGEEIYDRARKEEIECNII 246
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/560 (37%), Positives = 328/560 (58%), Gaps = 50/560 (8%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLF---DRI---PQRNLFLWNVLIRAYAW---N 51
+G +P++ TK S + +H A + D+ P + FL+N LIRA+A +
Sbjct: 148 LGLHHNPLVLTKFAATSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNTLIRAFAQTTHS 207
Query: 52 GPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG 111
P+ A+ Y + + P+ FTFPF LKAC+ + +E G +H +++ +E D V
Sbjct: 208 KPH--ALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKFGFEEDPHVR 265
Query: 112 AALIDMYAKC-----SCVVNARQVFDKILERD---------------------------- 138
L+ MY C S V+A++VFD+ +D
Sbjct: 266 NTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQ 325
Query: 139 -----PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVK 193
P E T+V+V+SA AD+ AL G+ L + R +V++ AL+DM+AKCG V
Sbjct: 326 VTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNALIDMFAKCGDVD 385
Query: 194 VARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACS 252
A +F +++ + +VSW +MI G AMHG +A+ +F++M ++ V PD + F+GVLSACS
Sbjct: 386 RAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACS 445
Query: 253 RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
GL D+G +F +M + I P ++HY CMVD+L +GR++EA + + M V+P+ +W
Sbjct: 446 HSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVEPNQVIW 505
Query: 313 GALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDR 372
+++ +C G +KL E ++LI EP NYV+LSNIYA+ WE K+R++M +
Sbjct: 506 RSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTKVREMMDVK 565
Query: 373 GIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDV 432
G++K + IE+ N+ + F++GD SH EIY ++ + +K AGYVP T V D+
Sbjct: 566 GMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEMGREIKRAGYVPTTSQVLLDI 625
Query: 433 ENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITV 492
+ ++K + + HSE+LAIAF L++TP GT + I KNL++C+DCH A KFISK+ REI V
Sbjct: 626 DEEDKEDALYRHSEKLAIAFALLSTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVV 685
Query: 493 RDVNRYHHFKDGICSCGDYW 512
RD NR+HHFK+G+CSCGD+W
Sbjct: 686 RDRNRFHHFKNGLCSCGDFW 705
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/539 (38%), Positives = 319/539 (59%), Gaps = 35/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL-LEI 67
+ +LV +Y +A +LFD +P ++L WN L+ + G + + R+ E
Sbjct: 99 IGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTES 158
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G P+ T + AC+ + A++EG+ +H V++ V +LI+MY K + A
Sbjct: 159 GRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAA 218
Query: 128 RQVFDKILER---------------------------------DPSEATLVTVISASADI 154
Q+F+++ R +P +AT+V ++ A D
Sbjct: 219 SQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDT 278
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
Q +H + R F ++ + TAL+++YAK G + + ++FE+++++ ++W AM+
Sbjct: 279 GLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAML 338
Query: 215 TGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
GYA+H +A+ LF+ M K+ V+ DH+TF +LSACS GL +EG+ +FE M Y +
Sbjct: 339 AGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRV 398
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
+P + HY+CMVDLLG SGRL++A +LI M ++P GVWGALL +C+++G+V+L + E
Sbjct: 399 EPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAE 458
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
+L+ L+P D NY++LSNIY+ A W +K+R LM +R + ++ CS+IE NK H F+
Sbjct: 459 QLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFV 518
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD HP DEI+ KL+ L +++EAG P TE V HD++ + K +MI HSE+LAIAFG
Sbjct: 519 VGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFG 578
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+ T G L+ITKNL+IC DCH KF S + +R I +RD R+HHF DG+CSC DYW
Sbjct: 579 LLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 637
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 144/319 (45%), Gaps = 16/319 (5%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + L+++Y L A QLF+ +P R+L WN ++ + NG E ++L
Sbjct: 193 LGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDL 252
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + G+ PD T L+AC+ + IH + R + D+ + AL+++YAK
Sbjct: 253 FNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAK 312
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
+ + +F++I +RD T +++ A A + +L + E++ T
Sbjct: 313 LGRLNASEDIFEEIKDRDRIAWT--AMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFT 370
Query: 181 ALVDMYAKCGLVKVARNLFEQLR-----EKRVVSWNAMITGYAMHGHSTKALDLFEKMKD 235
L+ + GLV+ + FE + E R+ ++ M+ G A +L + M
Sbjct: 371 HLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMP- 429
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV-QHYTCMVDLLGHSGRLD 294
++P + +L AC G + G+ E ++ +DPS ++Y + ++ +G
Sbjct: 430 -MEPSSGVWGALLGACRVYGNVELGKEVAEQLLS---LDPSDHRNYIMLSNIYSAAGLWR 485
Query: 295 EACD---LIMQMRVKPDPG 310
+A L+ + R+ +PG
Sbjct: 486 DASKVRALMKERRLTRNPG 504
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/545 (36%), Positives = 319/545 (58%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF F+ + + L+ +Y+ L A + R+ + ++ W +I Y + + A++L+
Sbjct: 445 GFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLF 504
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ DN F A+ AC+ + A+ +G++IH + + D+ +G AL+ +YA+C
Sbjct: 505 QEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARC 564
Query: 122 SCVVNARQVFDKILERD------------------------------PSEATLVT---VI 148
+A F+KI +D EA L T +
Sbjct: 565 GRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAV 624
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA+A+ A + QG+++H + ++ + L+ +Y+KCG ++ A+ F ++ EK VV
Sbjct: 625 SATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVV 684
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNAMITGY+ HG+ ++A+ LFE+MK + P+H+TFVGVLSACS GL +EG +F SM
Sbjct: 685 SWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSM 744
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+++ + P +HY C+VDLLG + L A + I +M ++PD +W LL++C +H ++++
Sbjct: 745 SKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEI 804
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E A L+ELEP D+ YV+LSN+YA + W+ + R++M DRG+KK SWIEVKN
Sbjct: 805 GEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKN 864
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
HAF GD HP ++IY + L R E GYV ++ +DVE ++K HSE+
Sbjct: 865 SIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEK 924
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+AFGL++ + + + KNL++C+DCH IKF+SKI+ R I VRD R+HHF+ G+CS
Sbjct: 925 LAVAFGLLSLTNTMPIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCS 984
Query: 508 CGDYW 512
C DYW
Sbjct: 985 CKDYW 989
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 194/412 (47%), Gaps = 42/412 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG ++ L+ LY C + AH+ F N+ LWNV++ AY G + +
Sbjct: 343 MGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWI 402
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ GL+P+ +T+P L+ C++L A++ G +IH VI++ ++ +V+V + LIDMYAK
Sbjct: 403 FLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAK 462
Query: 121 CSCVVNARQVFDKILERDPSEATLV---------------------------------TV 147
+ AR + ++ E D T + +
Sbjct: 463 HGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSA 522
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
ISA A I AL QG+++H S+ + ++ + ALV +YA+CG + A FE++ K
Sbjct: 523 ISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDN 582
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
+SWNA+I+G+A GH +AL +F +M V+ + TF +SA + +G+
Sbjct: 583 ISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAM 642
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGH 324
M++ + D + ++ L G +++A +M P+ V W A++ HG+
Sbjct: 643 MIKTGY-DSETEASNVLITLYSKCGSIEDAKREFFEM---PEKNVVSWNAMITGYSQHGY 698
Query: 325 VKLAELALEKL--IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
A E++ + L P+ +LS EG++ R + + G+
Sbjct: 699 GSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGL 750
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 191/411 (46%), Gaps = 45/411 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + LV LYS L A Q+F ++ +R+ +N LI A G + A++L+
Sbjct: 243 GLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLF 302
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ + PD T L AC+++ A +G+++H VI+ +D+ + +L+D+Y KC
Sbjct: 303 EKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKC 362
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ A + F + P++ T +++
Sbjct: 363 FDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSIL 422
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+ AL G ++H + F+ NV V + L+DMYAK G + AR + ++LRE+ VV
Sbjct: 423 RTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVV 482
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF-ES 266
SW AMI GY H +AL LF++M+++ ++ D+I F +SAC+ ++G+ +S
Sbjct: 483 SWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQS 542
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+ Y D S+ + +V L GR +A ++ K D W AL++ GH
Sbjct: 543 YISGYSEDLSIGN--ALVSLYARCGRAQDAYLAFEKIDAK-DNISWNALISGFAQSGH-- 597
Query: 327 LAELALEKLIELEPH--DAGNYVILSNIYARA--ANWEGVAKLRKLMIDRG 373
E AL+ ++ +A + S + A A AN + ++ +MI G
Sbjct: 598 -CEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTG 647
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 173/396 (43%), Gaps = 68/396 (17%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF VL ++L+ +Y A + NA +LFD IP N+ WN +I + L+
Sbjct: 40 GFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLF 99
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSA-IEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
++ + PD TF L+ACS A + +IH +I + + + V LID+Y+K
Sbjct: 100 SLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSK 159
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
V A+ VF+++ +D P+ +V
Sbjct: 160 NGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSV 219
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+SA I G +LHGF + V ALV +Y++ G + A +F ++ +
Sbjct: 220 LSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDR 279
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
+S+N++I+G A G S +AL LFEKM+ D ++PD +T +LSAC+ G +G+
Sbjct: 280 ISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSY 339
Query: 267 MVR---------------------------DYHIDPSVQH---YTCMVDLLGHSGRLDEA 296
+++ +Y + ++ + M+ G G L E+
Sbjct: 340 VIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSES 399
Query: 297 CDLIMQMRVK---PDPGVWGALLNSCKLHGHVKLAE 329
+ +QM+++ P+ + ++L +C G + L E
Sbjct: 400 YWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGE 435
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 134/307 (43%), Gaps = 41/307 (13%)
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
E G+ + T+ + + C ++ + +++H + ++ ++ + +G+ LID+Y V
Sbjct: 3 ERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVD 62
Query: 126 NARQVFDKILERD---------------------------------PSEATLVTVISA-S 151
NA ++FD I + P E+T +V+ A S
Sbjct: 63 NAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACS 122
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
A ++H H F + V L+D+Y+K G V +A+ +FE+L K VSW
Sbjct: 123 GGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWV 182
Query: 212 AMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
AMI+G + +G +A+ LF +M K V P F VLSAC++ LF G +V+
Sbjct: 183 AMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVK- 241
Query: 271 YHIDPSVQHYTC--MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
S + + C +V L G L A + +M + D + +L++ G A
Sbjct: 242 --WGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMH-RRDRISYNSLISGLAQRGFSDRA 298
Query: 329 ELALEKL 335
EK+
Sbjct: 299 LQLFEKM 305
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/544 (39%), Positives = 316/544 (58%), Gaps = 46/544 (8%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDR------IPQRNLFLWNVLIRAYAWNGPYEVAIE 59
+P L KL+ L+S C + A ++F+ +P+ +W + Y+ NG + A+
Sbjct: 107 NPTLKGKLITLFSVCGRVDEARRVFEDGGEDVDLPES---VWVAMGIGYSRNGYPKEALL 163
Query: 60 LYYRLL-EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
LYY ++ + G + NF F ALKACS L + GR +H V++ + D V AL+ +Y
Sbjct: 164 LYYEMVCQFGQL-GNFAFSMALKACSDLGDLRTGRAVHAQVLKATEDPDQVVNNALLRLY 222
Query: 119 AKCSCVVNARQVFDKILERDP---------------------------------SEATLV 145
++ C A ++FD + R+ S TL
Sbjct: 223 SEDGCFEEALRMFDGMPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLT 282
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
T++ A + AL G+E+H + + + V +LVDMYAKCG + R +F ++ K
Sbjct: 283 TILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGK 342
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
+ SWN +ITGYA++G T+A++ F++M PD ITF+ +LS CS GL D+G F
Sbjct: 343 DLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLF 402
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
E M D+ I P+V+HY C+VD+LG +GR+ EA +++ M KP +WG+LLNSC+LHG+
Sbjct: 403 EMMKMDHGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGN 462
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
V LAE ++L ELEP++AGNYV+LSNIYA A WE V +R+ M RG+ K CSW++
Sbjct: 463 VPLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQ 522
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKL-KWLEGRMKEAGYVPGTESVFHDVENDEKANMICC 443
+K+K H F++G ++ Y K+ K L M+E GYVP T V HDV + +A +C
Sbjct: 523 IKSKIHTFVAGGSNEFRNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCG 582
Query: 444 HSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKD 503
HSERLA F LINT G + ITKNL++C DCH +K +SK+T R I +RD NR+HHFKD
Sbjct: 583 HSERLATMFALINTASGMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKD 642
Query: 504 GICS 507
G+CS
Sbjct: 643 GVCS 646
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 5/131 (3%)
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS---WNAMITGYAMHGHSTKA 226
H N +K L+ +++ CG V AR +FE E + W AM GY+ +G+ +A
Sbjct: 102 HNLLNNPTLKGKLITLFSVCGRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEA 161
Query: 227 LDLFEKMKDEV-QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
L L+ +M + Q + F L ACS G GR +++ DP ++
Sbjct: 162 LLLYYEMVCQFGQLGNFAFSMALKACSDLGDLRTGRAVHAQVLKATE-DPDQVVNNALLR 220
Query: 286 LLGHSGRLDEA 296
L G +EA
Sbjct: 221 LYSEDGCFEEA 231
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKIT 486
LA F LINT G + ITKNL +C DCH +K +SK T
Sbjct: 700 LATMFALINTASGMPIRITKNLHVCVDCHSWVKIVSKNT 738
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/557 (40%), Positives = 314/557 (56%), Gaps = 65/557 (11%)
Query: 17 YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTF 76
Y + L +A QLFD+IP R+L WN +I YA +G A RL E V D FT+
Sbjct: 198 YVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQA----RRLFEESPVRDVFTW 253
Query: 77 PFALKACSALSAIEEGRRIHE-----------------------DVIRNKWETDVF--VG 111
+ A ++E RR+ + D+ R +E F +G
Sbjct: 254 TAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIG 313
Query: 112 A--ALIDMYAKCSCVVNARQVFDKILERDP------------------------------ 139
+ +I Y + + AR +FD + +RD
Sbjct: 314 SWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDG 373
Query: 140 ---SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
+ +T +SA ADIAAL G+++HG R +E V ALV MY KCG + A
Sbjct: 374 ESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAY 433
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGG 255
++F+ ++ K +VSWN M+ GYA HG +AL +FE M V+PD IT VGVLSACS G
Sbjct: 434 DVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTG 493
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
L D G +F SM +DY I P+ +HY CM+DLLG +G L+EA +LI M +PD WGAL
Sbjct: 494 LTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGAL 553
Query: 316 LNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIK 375
L + ++HG+++L E A E + ++EPH++G YV+LSN+YA + W V+K+R M G++
Sbjct: 554 LGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQ 613
Query: 376 KSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVEND 435
K+ SW+EV+NK H F GD HP IYA L+ L+ +MK GYV T+ V HDVE +
Sbjct: 614 KTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEE 673
Query: 436 EKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDV 495
EK +M+ HSE+LA+AFG++ P G + + KNL++C+DCH AIK ISKI R I VRD
Sbjct: 674 EKKHMLKYHSEKLAVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDS 733
Query: 496 NRYHHFKDGICSCGDYW 512
+RYHHF +GICSC DYW
Sbjct: 734 HRYHHFSEGICSCRDYW 750
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 153/334 (45%), Gaps = 30/334 (8%)
Query: 29 LFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSA 88
+FD +P RN +N +I Y N + +A +L+ ++ D F++ L +
Sbjct: 55 VFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPH----KDLFSWNLMLTGYARNRR 110
Query: 89 IEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVI 148
+ + R + + + E DV A++ Y + V AR VFD++ ++ + ++
Sbjct: 111 LRDARMLFDSMP----EKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKN--SISWNGLL 164
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A L + R L F + +EL L+ Y K ++ AR LF+Q+ + ++
Sbjct: 165 AAYVRSGRLEEARRL--FESKSDWEL--ISCNCLMGGYVKRNMLGDARQLFDQIPVRDLI 220
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
SWN MI+GYA G ++A LFE + D T+ ++ A + G+ DE R F+ M
Sbjct: 221 SWNTMISGYAQDGDLSQARRLFE---ESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMP 277
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ + Y M+ R+D +L +M P+ G W +++ G+ +
Sbjct: 278 QKREMS-----YNVMIAGYAQYKRMDMGRELFEEMPF-PNIGSWNIMIS-----GYCQNG 326
Query: 329 ELALEK-LIELEPH-DAGNYVILSNIYARAANWE 360
+LA + L ++ P D+ ++ + YA+ +E
Sbjct: 327 DLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYE 360
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 68/145 (46%), Gaps = 2/145 (1%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++ LV +Y C C+ A+ +F + +++ WN ++ YA +G A+ ++ ++
Sbjct: 414 LVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITA 473
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWET-DVFVGAALIDMYAKCSCVVN 126
G+ PD T L ACS + G + ++ T + A +ID+ + C+
Sbjct: 474 GVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEE 533
Query: 127 ARQVFDKILERDPSEATLVTVISAS 151
A+ + + + +P AT ++ AS
Sbjct: 534 AQNLI-RNMPFEPDAATWGALLGAS 557
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/557 (39%), Positives = 312/557 (56%), Gaps = 67/557 (12%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG--LVPDNFTFPFAL 80
LH ++Q+ D LF +N +IRA++ + + Y R+L L PDN+TF F +
Sbjct: 59 LHYSNQVLDNSQNPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLV 118
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA--------------------- 119
+ + L A G +H ++ +E D V + LI MYA
Sbjct: 119 RTSAQLLAHGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLV 178
Query: 120 ----------KCSCVVNARQVFDKILERDP------------------------------ 139
K V AR++FDK+ +DP
Sbjct: 179 CQTAMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREG 238
Query: 140 ---SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
+E ++V+V+SA + + AL QGR H + R++ + + + TAL+DMYAKCG + A
Sbjct: 239 VKVNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAM 298
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGG 255
+F ++EK V +W++ I G AM+G K L+LF MK D VQP+ ITFV VL CS G
Sbjct: 299 EVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVG 358
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
L +EGR FESM + Y I+P ++HY CMVDL G +G LDEA + I M V+P G WGAL
Sbjct: 359 LVEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGAL 418
Query: 316 LNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIK 375
LN+CK++ ++++ ELA K++ELE + G YV+LSNIYA + +W+ V+ +R+ M +G++
Sbjct: 419 LNACKIYRNMEMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVR 478
Query: 376 KSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVEND 435
K CS IEV + H F GD SHP EI L + R+K +GYV T VF D+E +
Sbjct: 479 KQPGCSVIEVGGEVHEFFVGDKSHPRYAEIQVMLGEISRRLKLSGYVANTNPVFFDIEEE 538
Query: 436 EKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDV 495
EK + +C HSE++AIAFGLI+ + I KNL++C DCH A K ISK REI VRD
Sbjct: 539 EKEDALCMHSEKIAIAFGLISLSPDVPIRIVKNLRVCWDCHDATKMISKAFNREIVVRDR 598
Query: 496 NRYHHFKDGICSCGDYW 512
NR+HHF+DG CSC YW
Sbjct: 599 NRFHHFRDGECSCKGYW 615
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 142/318 (44%), Gaps = 51/318 (16%)
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIH--EDVIRNKWETDVFVGAALID 116
+++ +LL GL+ D P + A A+ +H V+ N +F ++I
Sbjct: 27 QIHTQLLINGLLND----PQLVGQFVASIALNNPNNLHYSNQVLDNSQNPTLFTFNSMIR 82
Query: 117 MYAKCSCVVNARQVFDKILERD----PSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
++K S + + +IL P T ++ SA + A G +HG + ++ F
Sbjct: 83 AHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAHGTGSSVHGAAVKYGF 142
Query: 173 ELNVKVKTALVDMY-------------------------------AKCGLVKVARNLFEQ 201
E + V++ L+ MY AK G V AR LF++
Sbjct: 143 EYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACAKMGDVGFARKLFDK 202
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEG 260
+ K ++WNAMI+GY G S +AL LF M+ E V+ + ++ V VLSACS G D+G
Sbjct: 203 MSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLSACSHLGALDQG 262
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
R + R+ + ++ T ++D+ G +++A ++ M+ K + W + +
Sbjct: 263 RWAHAYIERN-KLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEK-NVYTWSSAIGGLA 320
Query: 321 LHGHVKLAELALEKLIEL 338
++G A EK +EL
Sbjct: 321 MNG-------AGEKCLEL 331
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
L T L+ +Y+ C ++ A ++F + ++N++ W+ I A NG E +EL+ + +
Sbjct: 279 TLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQD 338
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR 101
+ P+ TF L+ CS + +EEGR+ E + +
Sbjct: 339 SVQPNEITFVSVLRGCSVVGLVEEGRKHFESMSK 372
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/487 (40%), Positives = 298/487 (61%), Gaps = 38/487 (7%)
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC-- 121
+LE +P+ FT+PF LKAC+ + + G+ +H V++ + +V V L+ MY C
Sbjct: 1 MLERKKLPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRG 60
Query: 122 --SCVVNARQVFDKILERD---------------------------------PSEATLVT 146
+ AR+VFD++ + D P E T+V+
Sbjct: 61 GEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVS 120
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V+SA + AL G+ + + + R + NV++ AL+DM+AKCG V A NLF +RE+
Sbjct: 121 VLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERN 180
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+VSW ++I G AMHG +A+ +FE+M + V PD + F+G+LSACS GL D+G+ +F+
Sbjct: 181 IVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFD 240
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
SM +D+ I P ++HY CMVD+L +G + EA + +M + P+P VW L+N+C+ HG +
Sbjct: 241 SMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGEL 300
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
KL E +LI EP NYV+LSNIYA+ ++WE ++R+ M +G+KK + IE+
Sbjct: 301 KLGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIEL 360
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
N+ + F++GD SH EIY + + MK AGY+P T V D+++++K + + HS
Sbjct: 361 DNEIYEFVAGDKSHAQSKEIYEMVDEMGKEMKRAGYMPTTTEVLLDIDDEDKEDTLNRHS 420
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
E+LAIAF L+NTP GT + I KNL++CDDCH A KFISKI REI VRD NR+HHFK+G+
Sbjct: 421 EKLAIAFALLNTPPGTLIRIVKNLRVCDDCHSASKFISKIYNREIVVRDRNRFHHFKNGL 480
Query: 506 CSCGDYW 512
CSC D+W
Sbjct: 481 CSCRDFW 487
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 126/287 (43%), Gaps = 31/287 (10%)
Query: 2 GFGFHPVLATKLVHLYSAC----DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVA 57
GFG + LVH+Y C + A ++FD + + + W+ +I Y G A
Sbjct: 40 GFGDEVNVQNTLVHMYCCCRGGEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDA 99
Query: 58 IELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDM 117
I L+ + G+ PD T L AC+ L A+E G+ + V + + + +V + ALIDM
Sbjct: 100 INLFREMQIKGVCPDEITMVSVLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDM 159
Query: 118 YAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALP-QGRELHGFSWRHRFELNV 176
+AKC V A +F + ER+ ++S ++ I L GR + + FE V
Sbjct: 160 FAKCGDVDKATNLFRSMRERN--------IVSWTSVIGGLAMHGRGVEAVAV---FEEMV 208
Query: 177 K--------VKTALVDMYAKCGLVKVARNLFEQLREK-----RVVSWNAMITGYAMHGHS 223
+ V L+ + GLV + F+ +R+ ++ + M+ G
Sbjct: 209 RSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLV 268
Query: 224 TKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
+AL ++M + P+ + + +++AC G G ++R+
Sbjct: 269 KEALKFVQEMP--IDPNPVVWRTLINACRAHGELKLGEKITRQLIRN 313
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/550 (39%), Positives = 318/550 (57%), Gaps = 43/550 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + LV +Y+ C + +AH++FDR+ R++ W +I Y A+ L+
Sbjct: 162 GFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLF 221
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGR---RIHEDVIRNKWETDVFVGAALIDMY 118
++ E G + D T A+ SA+ + +GR +H + N + DV VG +++ MY
Sbjct: 222 RKMQEEGFLGDEIT---AISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMY 278
Query: 119 AKCSCVVNARQVFDKILER---------------------------------DPSEATLV 145
AKC V AR VFD++ ER DP+ T +
Sbjct: 279 AKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTAL 338
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE--QLR 203
++SA + + + GR+LH F + +++ ++ A++DMY KCG + A +F +L
Sbjct: 339 IMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELG 398
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRM 262
E+ V SWN +I+GY +HGH +AL+LF +M+ E V+P+ ITF +LSACS GL DEGR
Sbjct: 399 ERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRK 458
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
F M + + P ++HY CMVD+LG +G L+EA LI ++ +P VWGALL +C++H
Sbjct: 459 CFADMTK-LSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIH 517
Query: 323 GHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSW 382
G+ +L E+A L +LEP G YV++SNIYA + W+ V +R+ M RG+KK A S
Sbjct: 518 GNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSV 577
Query: 383 IEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMIC 442
IE + H F + D S P E+Y K++ L MK GYVP V HDVE ++K +++
Sbjct: 578 IEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLN 637
Query: 443 CHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFK 502
HSE+LA+AFG++ G + +TKNL++C DCH A KFIS I R+I VRD NR+HHF+
Sbjct: 638 YHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQ 697
Query: 503 DGICSCGDYW 512
G CSCGDYW
Sbjct: 698 GGRCSCGDYW 707
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 131/395 (33%), Positives = 201/395 (50%), Gaps = 47/395 (11%)
Query: 2 GFGFH-PVLATKLVHLYSACDCLHNAHQLFDR--------IPQRNLFLWNVLIRAYAWNG 52
GF H P +L+ LYS LH+A LFD N FL N ++RAYA G
Sbjct: 52 GFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAG 111
Query: 53 PYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGA 112
AI+LY + +G+ +NFT+PF LK C++ G +H V+R + +D+FV A
Sbjct: 112 RSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEA 171
Query: 113 ALIDMYAKCSCVVNARQVFDKILERD----------------PSEATL------------ 144
AL+DMYAKC + +A +VFD++L RD P +A +
Sbjct: 172 ALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLG 231
Query: 145 --VTVISASADIAALPQGR---ELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF 199
+T IS ++ + L GR +HG++ + F +V V ++V MYAKCG V+ AR +F
Sbjct: 232 DEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVF 291
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFD 258
+++ E+ +SWN+M++GY +G T AL LF +M+ E P+ +T + ++SACS G
Sbjct: 292 DRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKH 351
Query: 259 EGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV-KPDPGVWGALLN 317
GR + V +D ++D+ G LD A ++ + + D W L++
Sbjct: 352 LGRK-LHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLIS 410
Query: 318 SCKLHGHVKLA-ELALEKLIE-LEPHDAGNYVILS 350
+HGH K A EL +E +EP+D ILS
Sbjct: 411 GYGVHGHGKEALELFSRMQVEGVEPNDITFTSILS 445
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/533 (39%), Positives = 301/533 (56%), Gaps = 36/533 (6%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFT 75
+YS A ++FD +P+RN+ WN + G Y+ A+ + G P+ T
Sbjct: 152 MYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLIT 211
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL 135
F L AC+ S + GR++H V+++ +E DV V LID Y KC V + +F I
Sbjct: 212 FCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGIS 271
Query: 136 ER---------------------------------DPSEATLVTVISASADIAALPQGRE 162
+ +P++ + +V+SA A ++ L G+
Sbjct: 272 KPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKS 331
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
+H + + N+ V +ALVDMY KCG ++ A F+++ E+ +V+WNAMI GYA G
Sbjct: 332 VHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQ 391
Query: 223 STKALDLFEKM---KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQH 279
+ A+ LF++M V P+++TFV VLSACSR G + G FESM Y I+P +H
Sbjct: 392 ADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEH 451
Query: 280 YTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
Y C+VDLLG +G +++A I +M ++P VWGALL + K+ G +L ++A + L EL+
Sbjct: 452 YACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELD 511
Query: 340 PHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASH 399
P D+GN+V+LSN++A A WE +RK M D GIKK CSWI N H F + D SH
Sbjct: 512 PLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSH 571
Query: 400 PNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPD 459
EI A L L G M+ AGY+P T D+E +EKA + HSE++A+AFGLI+ P
Sbjct: 572 ERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPA 631
Query: 460 GTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
G + ITKNL+IC DCH AIKFIS I REI VRD N +H F+D CSC DYW
Sbjct: 632 GVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 684
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 165/371 (44%), Gaps = 36/371 (9%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
LV++YS D ++A L P R++ W LI NG + A+ + + + P+
Sbjct: 48 LVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPN 107
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+FTFP A KA +L + G+++H ++ +DVFVG + DMY+K AR++FD
Sbjct: 108 DFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFD 167
Query: 133 KILER---------------------------------DPSEATLVTVISASADIAALPQ 159
++ ER +P+ T ++A A + L
Sbjct: 168 EMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRL 227
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
GR+LHGF + FE +V V L+D Y KC V + +F + + VSW +MI Y
Sbjct: 228 GRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQ 287
Query: 220 HGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
+ KA +F + + E ++P VLSAC+ + + G+ V+ + ++
Sbjct: 288 NDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVG-NIF 346
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
+ +VD+ G G +++A +M + + W A++ G +A +++
Sbjct: 347 VGSALVDMYGKCGSIEDAERAFDEMPER-NLVTWNAMIGGYAHQGQADMAVTLFDEMTCG 405
Query: 339 EPHDAGNYVIL 349
A NYV
Sbjct: 406 SHRVAPNYVTF 416
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/545 (35%), Positives = 321/545 (58%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G FH + L+ LYS C + A Q+ +P ++F +N+++ + A+++
Sbjct: 153 GLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVL 212
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ G+ +N T+ + C++L I G+++H ++++ + DV++G+++IDMY KC
Sbjct: 213 KLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKC 272
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
V++ R FD++ R+ P+E T+ +
Sbjct: 273 GNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLF 332
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+++A ++AL G +LH + + + NV V AL+ MY K G + A+++F + ++
Sbjct: 333 NSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNII 392
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WNA+ITG++ HG +AL +F+ M + P+++TF+GV+ AC+ L DEG +F +
Sbjct: 393 TWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHL 452
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
++ + I P ++HYTC+V LL SGRLDEA + + ++ D W LLN+C +H H
Sbjct: 453 MKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDK 512
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E L++LEP D G Y++LSN++AR W+ V ++RKLM +R +KK SW+E++N
Sbjct: 513 GRKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRN 572
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
AH F S D HP + IY +K L +++ GYVP ++V HD+E+++K + + HSE+
Sbjct: 573 VAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEK 632
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+A+GL+ TP G + + KNL++CDDCH AIK ISK+ R I VRD NR+HHF++G CS
Sbjct: 633 LAVAYGLMKTPSGAPITVIKNLRMCDDCHTAIKLISKVANRVIVVRDANRFHHFQNGCCS 692
Query: 508 CGDYW 512
CGDYW
Sbjct: 693 CGDYW 697
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 135/279 (48%), Gaps = 37/279 (13%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNG-PYEVAIELYYRL-LEIG 68
L++LY CD + A +LFD +P+RN+ W+ L+ Y NG P EV EL+ ++ ++
Sbjct: 61 NSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEV-FELFKKMVVKDN 119
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P+ + A+ +C + + EG++ H +++ E +V ALI +Y+KCS V A
Sbjct: 120 IFPNEYVIATAISSCDSQMYV-EGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAI 178
Query: 129 QVFDKILERDP---------------------------------SEATLVTVISASADIA 155
Q+ + D + AT VT+ A +
Sbjct: 179 QILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLK 238
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+ G+++H + + +V + ++++DMY KCG V R F++L+ + VVSW ++I
Sbjct: 239 DITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIA 298
Query: 216 GYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRG 254
Y + +AL+LF KM+ + P + + VL + G
Sbjct: 299 AYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAG 337
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 108/252 (42%), Gaps = 40/252 (15%)
Query: 80 LKACSALSAIEEGRRIHEDVI---RNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILE 136
LK + ++ GR IH + N ++ V +LI++Y KC V AR++FD +
Sbjct: 26 LKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMPR 85
Query: 137 RD----------------------------------PSEATLVTVISASADIAALPQGRE 162
R+ P+E + T IS S D +G++
Sbjct: 86 RNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAIS-SCDSQMYVEGKQ 144
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
HG++ + E + VK AL+ +Y+KC V A + + + +N ++ G H H
Sbjct: 145 CHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTH 204
Query: 223 STKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYT 281
+A+D+ + + E ++ ++ T+V + C+ G+ M++ ID V +
Sbjct: 205 MAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKS-DIDCDVYIGS 263
Query: 282 CMVDLLGHSGRL 293
++D+ G G +
Sbjct: 264 SIIDMYGKCGNV 275
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 72/140 (51%), Gaps = 11/140 (7%)
Query: 127 ARQVFDKILERDPSEATLVTVISASADIAALPQGRELHG---FSWRHRFELNVKVKTALV 183
+R F +DP + ++ +AD L GR +H + + + V +L+
Sbjct: 10 SRSNFLASPHQDP-----IKLLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLI 64
Query: 184 DMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDH 241
++Y KC V +AR LF+ + + VVSW+A++ GY +G+ + +LF+KM KD + P+
Sbjct: 65 NLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNE 124
Query: 242 ITFVGVLSACSRGGLFDEGR 261
+S+C ++ EG+
Sbjct: 125 YVIATAISSCD-SQMYVEGK 143
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/544 (36%), Positives = 309/544 (56%), Gaps = 33/544 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF LA L+ +YS C + +++F + Q+N+ W +I +Y G Y+ L+
Sbjct: 327 GFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLF 386
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G PD F AL A + ++ G+ +H IRN E + V AL++MY KC
Sbjct: 387 QEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKC 446
Query: 122 SCVVNARQVFDKILERD--------------------------------PSEATLVTVIS 149
+ A+ +FD ++ +D P+ T+ ++
Sbjct: 447 GNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQLRPNAVTMTCILP 506
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A+A +++L +GRE+H ++ R + + V AL+DMY KCG + +AR LF++L K ++S
Sbjct: 507 AAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLIS 566
Query: 210 WNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
W M+ GY MHG A+ LFE+M+ + PD +F +L ACS GL DEG FF++M
Sbjct: 567 WTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMR 626
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+++ I+P ++HYTCMVDLL ++G L EA + I M ++PD +W +LL C++H +VKLA
Sbjct: 627 KEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLA 686
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
E E++ ELEP + G YV+L+NIYA A WE V KL+ + RG++++ CSWIE K K
Sbjct: 687 EEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGK 746
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
H F++ + +HP I L + RM+E G+ P + +N +C HS +L
Sbjct: 747 VHVFIADNRNHPQGTRIAEFLNEVAKRMQEEGHDPKKKYALMGADNAVHGEALCGHSSKL 806
Query: 449 AIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
A+AFG++N +G + +TKN ++C CH A KFISK+ REI +RD NR+HHF+ G CSC
Sbjct: 807 AVAFGVLNLSEGRLIRVTKNSRVCSHCHEAAKFISKMCSREIILRDSNRFHHFEQGRCSC 866
Query: 509 GDYW 512
YW
Sbjct: 867 RGYW 870
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 171/389 (43%), Gaps = 66/389 (16%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GFG + L+ Y+ + +A +FD +P R++ WN +I NG Y+ AIEL
Sbjct: 225 LGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIEL 284
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+ G D+ T L AC+ L + GR +H ++ + + + L+DMY+
Sbjct: 285 FVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSN 344
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
CS + ++F +++++ P + +
Sbjct: 345 CSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSA 404
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A A L G+ +HG++ R+ E + V AL++MY KCG ++ A+ +F+ + K +
Sbjct: 405 LHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDM 464
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGR-MFFES 266
+SWN +I GY+ + + +A LF +M +++P+ +T +L A + + GR M +
Sbjct: 465 ISWNTLIGGYSRNNLANEAFSLFTEMLLQLRPNAVTMTCILPAAASLSSLERGREMHAYA 524
Query: 267 MVRDYHIDPSVQH-----------------------------YTCMVDLLGHSGRLDEAC 297
+ R Y D V + +T MV G GR +A
Sbjct: 525 LRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAI 584
Query: 298 DLIMQMRVK---PDPGVWGALLNSCKLHG 323
L QMRV PD + A+L +C G
Sbjct: 585 ALFEQMRVSGIAPDAASFSAILYACSHSG 613
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 176/401 (43%), Gaps = 42/401 (10%)
Query: 4 GFHPVLATKLVHLYSACDCLHNAHQLFDRIPQ-RNLFLWNVLIRAYAWNGPYEVAIELYY 62
G VL KLV +Y C L NA ++FD +PQ ++ +W L+ YA G + L+
Sbjct: 126 GMDNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFR 185
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
++ G+ PD +T LK + L +IE+G +H + + + + VG AL+ YAK +
Sbjct: 186 KMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSN 245
Query: 123 CVVNARQVFDKILERDP---------------------------------SEATLVTVIS 149
+A VFD + RD ATL++V+
Sbjct: 246 RTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLP 305
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A A++ L GR +HG+S + F + L+DMY+ C + +F + +K VVS
Sbjct: 306 ACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVS 365
Query: 210 WNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
W AMIT Y G K LF++M E +PD L A + L G+ +
Sbjct: 366 WTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAI 425
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
R+ ++ + ++++ G ++EA LI V D W L+ + A
Sbjct: 426 RN-GMEKVLAVTNALMEMYVKCGNMEEA-KLIFDGVVSKDMISWNTLIGGYSRNNLANEA 483
Query: 329 -ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKL 368
L E L++L P N V ++ I AA+ + + R++
Sbjct: 484 FSLFTEMLLQLRP----NAVTMTCILPAAASLSSLERGREM 520
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 142/329 (43%), Gaps = 49/329 (14%)
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVF---VGAALIDMYAKCSCVVNAR 128
D+ ++ L+ CS + ++E G+R H V + D +G L+ MY KC + NAR
Sbjct: 90 DDRSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENAR 149
Query: 129 QVFDKILERD----------------------------------PSEATLVTVISASADI 154
+VFD++ + P T+ V+ A +
Sbjct: 150 RVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGL 209
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
++ G +HG + F V AL+ YAK K A +F+ + + V+SWN+MI
Sbjct: 210 GSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMI 269
Query: 215 TGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+G +G KA++LF +M E + D T + VL AC+ L +F +V Y +
Sbjct: 270 SGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHL-----LFLGRVVHGYSV 324
Query: 274 DPSVQHYTCMVDLL--GHSGRLD-EACDLIMQMRVKPDPGVWGALLNSCKLHG-HVKLAE 329
T + ++L +S D + + I + V+ + W A++ S G + K+A
Sbjct: 325 KTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAG 384
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAAN 358
L E +E D + I S ++A A N
Sbjct: 385 LFQEMGLEGTRPDI--FAITSALHAFAGN 411
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/556 (38%), Positives = 323/556 (58%), Gaps = 56/556 (10%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFL----WNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+V Y+ A +LF+ + + N+ L W+ +I YA G + A++ + +++ G
Sbjct: 331 MVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDG 390
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN------------KWETDVFVGAALID 116
P++ T L AC++L A+ +G IH ++ D+ V ALID
Sbjct: 391 SEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALID 450
Query: 117 MYAKCSCVVNARQVFDKILERD-------------------------------------P 139
MY+KC AR +FD I R+ P
Sbjct: 451 MYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAP 510
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRH-RFELNVK-VKTALVDMYAKCGLVKVARN 197
+ T+ ++ A A +AAL G+++H + RH +E +V V L+DMY+KCG V ARN
Sbjct: 511 NAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARN 570
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGL 256
+F+ + ++ VSW +M++GY MHG +ALD+F+KM K PD I+F+ +L ACS G+
Sbjct: 571 VFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGM 630
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
D+G +F+ M RDY + S +HY C++DLL GRLD+A I +M ++P +W ALL
Sbjct: 631 VDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALL 690
Query: 317 NSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKK 376
++C++H +V+LAE AL KL+ ++ + G+Y ++SNIYA A W+ VA++R+LM GIKK
Sbjct: 691 SACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKK 750
Query: 377 SIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDE 436
CSW++ K +F GD SHP EIY+ L+ L GR+K GYVP T HDV+++E
Sbjct: 751 RPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEE 810
Query: 437 KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVN 496
K N++ HSE+LA+A+GL+ T G + ITKNL++C DCH A +ISKI + EI VRD +
Sbjct: 811 KNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIIVRDSS 870
Query: 497 RYHHFKDGICSCGDYW 512
R+HHFK+G CSCG YW
Sbjct: 871 RFHHFKNGSCSCGGYW 886
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 151/305 (49%), Gaps = 43/305 (14%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T +V Y AC +A + +R+ WN+L+R + G + AI + R+L G
Sbjct: 85 LGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAG 144
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
PD+FT P+ALKAC L + GR +H + N +E++VFV AL+ MY++C + +A
Sbjct: 145 TKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDAS 204
Query: 129 QVFDKILER-------------------DPSEA-----------------------TLVT 146
VFD+I + +P A ++V
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVN 264
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ A A + ALPQ +E+H ++ R+ + V AL+D YAKCG + A +F + K
Sbjct: 265 ILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKD 324
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFE 265
VVSWNAM+TGY G+ A +LFE M+ E P D IT+ V++ ++ G E F+
Sbjct: 325 VVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQ 384
Query: 266 SMVRD 270
M+ D
Sbjct: 385 QMILD 389
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 125/273 (45%), Gaps = 51/273 (18%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQR---NLFLWNVLIRAYAWNGPYEVAI 58
GF + + LV +YS C L +A +FD I ++ ++ WN ++ A+ A+
Sbjct: 179 GFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTAL 238
Query: 59 ELYYRLLEI------GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGA 112
EL+ + I D + L AC++L A+ + + IH IRN D FV
Sbjct: 239 ELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCN 298
Query: 113 ALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
ALID YAKC + +A +VF+ + +D SW
Sbjct: 299 ALIDTYAKCGSMNDAVKVFNVMEFKDV--------------------------VSW---- 328
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR----VVSWNAMITGYAMHGHSTKALD 228
A+V Y + G A LFE +R++ V++W+A+I GYA G S +ALD
Sbjct: 329 -------NAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALD 381
Query: 229 LFEKM-KDEVQPDHITFVGVLSACSRGGLFDEG 260
F++M D +P+ +T + +LSAC+ G +G
Sbjct: 382 AFQQMILDGSEPNSVTIISLLSACASLGALSQG 414
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 77/146 (52%), Gaps = 8/146 (5%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A L+ +YS C + A +FD +P+RN W ++ Y +G + A++++ ++ + G
Sbjct: 551 VANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAG 610
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG----AALIDMYAKCSCV 124
VPD+ +F L ACS +++G + D++R + DV A +ID+ A+C +
Sbjct: 611 FVPDDISFLVLLYACSHSGMVDQGLN-YFDIMRRDY--DVVASAEHYACVIDLLARCGRL 667
Query: 125 VNARQVFDKILERDPSEATLVTVISA 150
A + + + +PS V ++SA
Sbjct: 668 DKAWKTIQE-MPMEPSAVIWVALLSA 692
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 14/133 (10%)
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
+C V RQ+ KI+ S +A LP H + +
Sbjct: 40 ECRSVNTVRQIHQKIIA---CGLLSYPSSLLSVPLAPLPS----------HSYVSPKSLG 86
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQ 238
T +V Y CG K A ++ E++ V WN ++ + GH +A+ + +M + +
Sbjct: 87 TGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTK 146
Query: 239 PDHITFVGVLSAC 251
PDH T L AC
Sbjct: 147 PDHFTLPYALKAC 159
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/547 (39%), Positives = 328/547 (59%), Gaps = 36/547 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV-AIEL 60
G+G L TKL++L A + Q+F +P + FL+ LI++ + + + + ++
Sbjct: 39 GYGRSRSLLTKLLNLACAAGSISYTRQIFLAVPNPDSFLFTSLIKSTSKSHNFSIYSLYF 98
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
Y R++ + P N+TF +K+C+ LSA++ GR +H V+ + + DV+V AAL+ +Y K
Sbjct: 99 YSRMVLSNVSPSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGK 158
Query: 121 CSCVVNARQVFDKILER---------------------------------DPSEATLVTV 147
C ++NAR+VFDKI ER +P AT V+V
Sbjct: 159 CGDLINARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSV 218
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+SA A + A G +H + + +LNV + T+L++MY +CG V AR +F+ ++E+ V
Sbjct: 219 LSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNV 278
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V+W AMI+GY +G+ ++A++LF +M+ + + P+ ITFV VLSAC+ GL +EGR F S
Sbjct: 279 VAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFAS 338
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ-MRVKPDPGVWGALLNSCKLHGHV 325
+ +YH+ P V+H C+VD+LG +G LDEA + I + + P P + A+L +CK+H +
Sbjct: 339 IREEYHLVPGVEHNVCLVDMLGRAGLLDEAYNFIKEEIPENPAPAILTAMLGACKMHKNF 398
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
L E L+ EP + +YVILSNIYA A + V +R MI + +KK + S +EV
Sbjct: 399 DLGAQVAEHLLAAEPENPAHYVILSNIYALAGRMDQVEIVRNNMIRKCLKKQVGYSTVEV 458
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
K + F GD SH + IY L L + EAGYVP ++SV H++E +E+ + HS
Sbjct: 459 DQKTYLFSMGDKSHSETNAIYHYLDELMWKCSEAGYVPVSDSVMHELEEEEREYALRYHS 518
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
E+LAIAFGL+ T GT + I KNL++C+DCH AIKFIS I+ REI VRD R+HHFK G
Sbjct: 519 EKLAIAFGLLKTSHGTPIRIVKNLRMCEDCHSAIKFISAISSREIIVRDKLRFHHFKVGS 578
Query: 506 CSCGDYW 512
CSC DYW
Sbjct: 579 CSCLDYW 585
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/556 (39%), Positives = 315/556 (56%), Gaps = 48/556 (8%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQ--RNLFLWNVLIRAYAWNGPYEVAIE 59
GF ++A ++ +Y C + A ++FD + + R++ WN+++ Y N + AI+
Sbjct: 190 GFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQ 249
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
LY R+ L PD T+ L ACS+ + GR +H+ ++ ++ E +V VG AL+ MYA
Sbjct: 250 LYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYA 306
Query: 120 KCSCVVNARQVFDKILERD----------------------------------------P 139
KC AR VFDK+ +R P
Sbjct: 307 KCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKP 366
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF 199
VT+++A AD++AL QG+ + + + V TA+V++Y KCG ++ AR +F
Sbjct: 367 DALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIF 426
Query: 200 EQLREKRVVS-WNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLF 257
+ + + V WNAMI YA G S +AL LF +M+ E V+PD +FV +L ACS GL
Sbjct: 427 DAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLE 486
Query: 258 DEGRMFFESMVRDY-HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
D+G+ +F SM +Y ++ ++QH+ C+ DLLG GRL EA + + ++ VKPD W +LL
Sbjct: 487 DQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLL 546
Query: 317 NSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKK 376
+C+ H +K A+ KL+ LEP A YV LSNIYA W VAK+RK M ++G+KK
Sbjct: 547 AACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKK 606
Query: 377 SIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDE 436
S IE+ H F +GD +HP EI +L L +MKE GYVP T+ V H V+ E
Sbjct: 607 ERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQE 666
Query: 437 KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVN 496
K ++ HSERLAIA GLI+TP GT L +TKNL++C DCH A K ISKI R+I VRD
Sbjct: 667 KERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPT 726
Query: 497 RYHHFKDGICSCGDYW 512
R+H FKDG CSC DYW
Sbjct: 727 RFHLFKDGKCSCQDYW 742
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 175/380 (46%), Gaps = 78/380 (20%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFT 75
+Y+ CD +A FD + QRNL+ W L+ A+A +G + + R+ + G+ PD T
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDK-- 133
F AL +C ++ +G RIH+ V+ ++ E D V AL++MY KC + +A++VF K
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120
Query: 134 --------------------------------ILERDPSEATLVTVISASADIAALPQGR 161
+L +++ +VT++SA + A + GR
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180
Query: 162 ELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE--KRVVSWNAMITGYAM 219
+H FE + V A++ MY +CG V+ AR +F+ + E + VVSWN M++ Y
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVH 240
Query: 220 HGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD--------- 270
+ A+ L+++M +++PD +T+V +LSACS GR+ + +V D
Sbjct: 241 NDRGKDAIQLYQRM--QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVG 298
Query: 271 -----------YHIDP----------SVQHYTCMVDLLGHSGRLDEACDLIMQM------ 303
H + S+ +T ++ + EAC L QM
Sbjct: 299 NALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKN 358
Query: 304 ----RVKPDPGVWGALLNSC 319
RVKPD + +LN+C
Sbjct: 359 GSSQRVKPDALAFVTILNAC 378
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/526 (40%), Positives = 308/526 (58%), Gaps = 52/526 (9%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYA-WNGPYEVAIELYYRLLEIGLVPDNFTFPFALK 81
+ +AHQLFD+I Q N+ L+N + R YA N P + F L+
Sbjct: 77 MEHAHQLFDQITQPNIVLFNTMARGYARLNDPLRMITH----------------FRRCLR 120
Query: 82 ACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI------- 134
S + A+ EG+++H ++ +++V LI+MY C + +R+VFDKI
Sbjct: 121 LVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVA 180
Query: 135 -------LERD-------------------PSEATLVTVISASADIAALPQGRELHGFSW 168
L R+ P++ T++ V+S+ A + +L GR +H +
Sbjct: 181 YNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVK 240
Query: 169 RHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALD 228
++ F+ VKV T L+DMYAKCG + A N+F + ++ +W+A+I YA HG +A+
Sbjct: 241 KYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAIS 300
Query: 229 LFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLL 287
+ +MK E VQPD ITF+G+L ACS GL +EG +F M +Y I PS++HY CMVDLL
Sbjct: 301 MLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLL 360
Query: 288 GHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYV 347
G +GRLDEA I ++ +KP P +W LL++C HG+V++ + +E++ EL+ G+YV
Sbjct: 361 GRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYV 420
Query: 348 ILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYA 407
I SN+ AR W+ V LRK MID+G K CS IEV N H F +G+ H ++
Sbjct: 421 IFSNLCARYGKWDDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHR 480
Query: 408 KLKWLEGRMKEAGYVPGTESVFH-DVENDEKANMICCHSERLAIAFGLINTPDGTRLLIT 466
L L +K AGYVP T VF+ D+E++EK ++ HSE+LAI FGL+NTP GT + +
Sbjct: 481 ALDELVKELKSAGYVPDTSLVFYADMEDEEKEIILRYHSEKLAITFGLLNTPPGTTIRVV 540
Query: 467 KNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
KNL++C DCH A KFIS I R+I +RDV R+HHFKDG CSCGDYW
Sbjct: 541 KNLRVCGDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 586
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 138/306 (45%), Gaps = 41/306 (13%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + L+++Y+AC + + ++FD+I + + +N +I + A N A+ L
Sbjct: 141 LGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALAL 200
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ L EIGL P + T L +C+ L +++ GR +HE V + ++ V V LIDMYAK
Sbjct: 201 FRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAK 260
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + +A VF + +RD P E T + +
Sbjct: 261 CGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGI 320
Query: 148 ISASADIAALPQGRE-LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+ A + + +G E HG + + ++K +VD+ + G + A ++L K
Sbjct: 321 LYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKP 380
Query: 207 V-VSWNAMITGYAMHGHSTKALDLFEK---MKDEVQPDHITFVGVLSACSRGGLFDEGRM 262
+ W +++ + HG+ + E+ + D D++ F + C+R G +D+
Sbjct: 381 TPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNL---CARYGKWDDVNH 437
Query: 263 FFESMV 268
++M+
Sbjct: 438 LRKTMI 443
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/546 (38%), Positives = 319/546 (58%), Gaps = 35/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + T LV +YS C+ A QLF+ + +RN+ WN ++ Y+ +G E AI+L+
Sbjct: 152 GFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLF 211
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ GL+ D +T + A ++ ++ G IH +IR +E D + AL+D+Y
Sbjct: 212 NLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSH 271
Query: 122 SCVVNARQVFDKILERDPSEATLVT----------------------------------V 147
+CV +A +VF ++ +D + TL+ +
Sbjct: 272 NCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGI 331
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+S+ + AL QGR +H + + F N+ V +A++DMYA CG ++ A+ F + EK V
Sbjct: 332 LSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDV 391
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V WNAMI G M+G+ T A+DLF +MK + PD TFV VL ACS G+ EG F
Sbjct: 392 VCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYH 451
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
MV+ H P++QHY C++D+LG +G+LD A I M +PD V+ LL +C++HG++K
Sbjct: 452 MVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIK 511
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
L +K+ E+EP+DAG YV+LSN+YA A NWEGV R + + +KK S IE+
Sbjct: 512 LGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEIN 571
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
+ + F++G+ HP +I LK L ++K+AGYVP T + DV +D K +++ HSE
Sbjct: 572 QEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSE 631
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
++AIAFGL+ T GT + ITKNL+ C+DCH A KF+SK+ R + ++D NR+H F+DG+C
Sbjct: 632 KMAIAFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKVFGRVLVIKDANRFHVFQDGVC 691
Query: 507 SCGDYW 512
SC DYW
Sbjct: 692 SCRDYW 697
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 186/430 (43%), Gaps = 72/430 (16%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + L+ L++ Y C L +A Q+F P +N+ W +LI A N + AI+++
Sbjct: 51 GLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVF 110
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ P+ T L A + L I + +H +R +E +VFV AL+DMY+K
Sbjct: 111 REMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKF 170
Query: 122 SCVVNARQVFDKILERD----------------PSEA-----------------TLVTVI 148
C+ ARQ+F+ + ER+ EA T++++I
Sbjct: 171 GCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLI 230
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
AS + L G +HGF R +E + +KTAL+D+Y V A +F ++ K V
Sbjct: 231 PASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVA 290
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMK--DEVQPDHITFVGVLSACSRGGLFDEGR----- 261
+W M+TG++ H +A+ F KM ++ D I +G+LS+CS G +GR
Sbjct: 291 AWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHAL 350
Query: 262 ---------MFFESMVRDYHID----------------PSVQHYTCMVDLLGHSGRLDEA 296
+F S V D + + V + M+ G +G +A
Sbjct: 351 AIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDA 410
Query: 297 CDLIMQMR---VKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGN---YVILS 350
DL +QM+ + PD + ++L +C G V +++ HD N Y +
Sbjct: 411 IDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVK-TSHDIPNLQHYACVI 469
Query: 351 NIYARAANWE 360
+I RA +
Sbjct: 470 DILGRAGQLD 479
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 139/294 (47%), Gaps = 43/294 (14%)
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGR---RIHEDVIRNKWETDVFVGAALIDM 117
+YR L P P A S L +++ + +IH +I + + F+ +L++
Sbjct: 8 FYRHLSSN--PTQRLCPLAQSHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNA 65
Query: 118 YAKCSCVVNARQVF---------------------DKILER------------DPSEATL 144
Y C + +A+Q+F D +E P+ T+
Sbjct: 66 YVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTI 125
Query: 145 VTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE 204
+V+ A A++ + + +H F R FE NV V+TALVDMY+K G + VAR LFE + E
Sbjct: 126 SSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSE 185
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMF 263
+ VVSWNA+++GY+ HG S +A+DLF M+ + + D T + ++ A G G
Sbjct: 186 RNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGI 245
Query: 264 FESMVRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
++R Y D ++ T ++D+ +D+A + +M VK D W +L
Sbjct: 246 HGFIIRTGYENDKHIK--TALMDIYVSHNCVDDAHRVFSEMFVK-DVAAWTLML 296
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/554 (38%), Positives = 329/554 (59%), Gaps = 50/554 (9%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWN-GPYEVAIELYYRLLEI 67
L K++ L S+ ++ A ++FD I + F+WN LIRA A + E A LY ++LE
Sbjct: 62 LYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLER 121
Query: 68 G-LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
G PD TFPF LKAC+ + EG+++H ++++ + DV+V LI +Y C C+
Sbjct: 122 GESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDL 181
Query: 127 ARQVFDKILER--------------------------------DPSEATLVTVISASADI 154
AR+VFD++ ER +P T+ +V+SA A +
Sbjct: 182 ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGL 241
Query: 155 AALPQGRELHGFSWRH---RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+L G H F R ++V VK +L++MY KCG +++A +F+ ++++ + SWN
Sbjct: 242 GSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWN 301
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE---VQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
AMI G+A HG + +A++ F++M D+ V+P+ +TFVG+L AC+ G ++GR +F+ MV
Sbjct: 302 AMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMV 361
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS-CKLHGHVKL 327
RDY I+P+++HY C+VDL+ +G + EA D++M M +KPD +W +LL++ CK V+L
Sbjct: 362 RDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVEL 421
Query: 328 AELALEKLIELEPHD-------AGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIAC 380
+E +I + + +G YV+LS +YA A+ W V +RKLM + GI+K C
Sbjct: 422 SEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGC 481
Query: 381 SWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPG-TESVFHDVEND-EKA 438
S IE+ +H F +GD SHP +IY +LK ++ R++ GY+P +++ D ND K
Sbjct: 482 SSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKE 541
Query: 439 NMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRY 498
+ HSERLAIAFGLIN P T + I KNL++C+DCH K ISK+ EI VRD R+
Sbjct: 542 YSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRF 601
Query: 499 HHFKDGICSCGDYW 512
HHFKDG CSC DYW
Sbjct: 602 HHFKDGSCSCLDYW 615
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/475 (42%), Positives = 298/475 (62%), Gaps = 40/475 (8%)
Query: 74 FTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDK 133
FT+ L A +S E +H V++ +E VG AL+D Y K V A +VF
Sbjct: 2 FTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSG 57
Query: 134 ILERD---------------------------------PSEATLVTVISA-SADIAALPQ 159
I ++D P+E T ++++ +A A++ Q
Sbjct: 58 IDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQ 117
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G++ HGF+ + R + ++ V +AL+ MYAK G ++ A +F++ REK +VSWN+MI+GYA
Sbjct: 118 GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQ 177
Query: 220 HGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
HG + KALD+F++MK +V+ D +TF+GV +AC+ GL +EG +F+ MVRD I P+ +
Sbjct: 178 HGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKE 237
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
H +CMVDL +G+L++A +I M +W +L +C++H +L LA EK+I +
Sbjct: 238 HNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAM 297
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDAS 398
+P D+ YV+LSN+YA + +W+ AK+RKLM +R +KK SWIEVKNK ++FL+GD S
Sbjct: 298 KPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRS 357
Query: 399 HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTP 458
HP D+IY KL+ L R+K+ GY P T V D++++ K ++ HSERLAIAFGLI TP
Sbjct: 358 HPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATP 417
Query: 459 DGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF-KDGICSCGDYW 512
G+ LLI KNL++C DCH+ IK I+KI EREI VRD NR+HHF DG+CSCGD+W
Sbjct: 418 KGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 472
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/554 (38%), Positives = 329/554 (59%), Gaps = 50/554 (9%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWN-GPYEVAIELYYRLLEI 67
L K++ L S+ ++ A ++FD I + F+WN LIRA A + E A LY ++LE
Sbjct: 85 LYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLER 144
Query: 68 G-LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
G PD TFPF LKAC+ + EG+++H ++++ + DV+V LI +Y C C+
Sbjct: 145 GESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDL 204
Query: 127 ARQVFDKILER--------------------------------DPSEATLVTVISASADI 154
AR+VFD++ ER +P T+ +V+SA A +
Sbjct: 205 ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGL 264
Query: 155 AALPQGRELHGFSWRH---RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+L G H F R ++V VK +L++MY KCG +++A +F+ ++++ + SWN
Sbjct: 265 GSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWN 324
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE---VQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
AMI G+A HG + +A++ F++M D+ V+P+ +TFVG+L AC+ G ++GR +F+ MV
Sbjct: 325 AMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMV 384
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS-CKLHGHVKL 327
RDY I+P+++HY C+VDL+ +G + EA D++M M +KPD +W +LL++ CK V+L
Sbjct: 385 RDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVEL 444
Query: 328 AELALEKLIELEPHD-------AGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIAC 380
+E +I + + +G YV+LS +YA A+ W V +RKLM + GI+K C
Sbjct: 445 SEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGC 504
Query: 381 SWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPG-TESVFHDVEND-EKA 438
S IE+ +H F +GD SHP +IY +LK ++ R++ GY+P +++ D ND K
Sbjct: 505 SSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKE 564
Query: 439 NMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRY 498
+ HSERLAIAFGLIN P T + I KNL++C+DCH K ISK+ EI VRD R+
Sbjct: 565 YSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRF 624
Query: 499 HHFKDGICSCGDYW 512
HHFKDG CSC DYW
Sbjct: 625 HHFKDGSCSCLDYW 638
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/552 (38%), Positives = 313/552 (56%), Gaps = 69/552 (12%)
Query: 30 FDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV-PDNFTFPFALKACSALSA 88
F+++ +R++ WN +I Y G A++++ ++L ++ PD FT L AC+ L
Sbjct: 235 FEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEK 294
Query: 89 IEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA--------------------- 127
+ G +IH ++ ++ V ALI MY++C V A
Sbjct: 295 LCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALL 354
Query: 128 ------------RQVFDKILERD---------------------------------PSEA 142
+ +FD + +RD P+
Sbjct: 355 DGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSY 414
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
TL ++S ++ +A+L G+++HG + + +V V AL+ MYAK G + A F+ +
Sbjct: 415 TLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLI 474
Query: 203 R-EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEG 260
R E+ VSW +MI A HGH+ +AL+LFE M E ++PDHIT+VGV SAC+ GL ++G
Sbjct: 475 RCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQG 534
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
R +F+ M I P++ HY CMVDL G +G L EA + I +M ++PD WG+LL++C+
Sbjct: 535 RQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACR 594
Query: 321 LHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIAC 380
++ ++ L ++A E+L+ LEP ++G Y L+N+Y+ WE AK+RK M D +KK
Sbjct: 595 VYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGF 654
Query: 381 SWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANM 440
SWIEVK+K HAF D HP +EIY +K + +K+ GYVP T SV HD+E + K +
Sbjct: 655 SWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQI 714
Query: 441 ICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHH 500
+ HSE+LAIAFGLI+TPD T L I KNL++C+DCH AIKFISK+ REI VRD R+HH
Sbjct: 715 LRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHH 774
Query: 501 FKDGICSCGDYW 512
FKDG CSC DYW
Sbjct: 775 FKDGFCSCRDYW 786
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 141/305 (46%), Gaps = 44/305 (14%)
Query: 28 QLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALS 87
+ FDR+PQR+ W +I Y G Y AI + ++ G+ P FT L + +A
Sbjct: 101 EFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATR 160
Query: 88 AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTV 147
+E G+++H +++ +V V +L++MYAKC + A+ VFD+++ +D S
Sbjct: 161 CLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDIS------- 213
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
SW A++ ++ + G + +A FEQ+ E+ +
Sbjct: 214 -------------------SW-----------NAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V+WN+MI+GY G+ +ALD+F KM + + PD T VLSAC+ G
Sbjct: 244 VTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHS 303
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
+V D S ++ + G ++ A LI Q R D + G + L G++
Sbjct: 304 HIVTT-GFDISGIVLNALISMYSRCGGVETARRLIEQ-RGTKDLKIEGF---TALLDGYI 358
Query: 326 KLAEL 330
KL ++
Sbjct: 359 KLGDM 363
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 145/320 (45%), Gaps = 37/320 (11%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y ++ A +FD + R++ W +I Y +G Y AI L+ ++
Sbjct: 351 TALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQR 410
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
P+++T L S+L+++ G++IH +++ V V ALI MYAK + +A +
Sbjct: 411 PNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRA 470
Query: 131 FDKI-LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL------- 182
FD I ERD +S ++ I AL Q HG + + L
Sbjct: 471 FDLIRCERD--------TVSWTSMIIALAQ----HGHAEEALELFETMLMEGLRPDHITY 518
Query: 183 VDMYAKC---GLVKVARNLFEQLRE-----KRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
V +++ C GLV R F+ +++ + + M+ + G +A + EKM
Sbjct: 519 VGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMP 578
Query: 235 DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP-SVQHYTCMVDLLGHSGRL 293
++PD +T+ +LSAC D G++ E ++ ++P + Y+ + +L G+
Sbjct: 579 --IEPDVVTWGSLLSACRVYKNIDLGKVAAERLLL---LEPENSGAYSALANLYSACGKW 633
Query: 294 DEACDLIMQM---RVKPDPG 310
+EA + M RVK + G
Sbjct: 634 EEAAKIRKSMKDGRVKKEQG 653
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/546 (37%), Positives = 317/546 (58%), Gaps = 34/546 (6%)
Query: 1 MGFGFHPVLATKLVHLYSAC---DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVA 57
+G ++ LV +Y+ LHNA ++F+R+P+ N+ W L+ Y G +
Sbjct: 284 LGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQ 343
Query: 58 IE-LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
+ L+ ++L G+ P++ T+ LKAC+ L + GR+IH +++ VG AL+
Sbjct: 344 VMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVS 403
Query: 117 MYAKCSCVVNARQVFDKILERDP----------------------------SEATLVTVI 148
MYA+ + AR FD++ E++ S T ++I
Sbjct: 404 MYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQIERMELGISTFTFGSLI 463
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA+A + L +G+ LH S + F + + +LV MY++CG + A +F+++ + V+
Sbjct: 464 SAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVI 523
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SW +MI+G A HG++ +AL+LF M V+P+ +T++ VLSACS GL EG+ F M
Sbjct: 524 SWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMM 583
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ + + P ++HY CMVDLLG SG +++A D I +M + D VW LL +CK H ++ +
Sbjct: 584 QKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDI 643
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E+A +I+LEP D YV+LSN+YA A W+ VA++R LM D+ + K SW+ V N
Sbjct: 644 GEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDN 703
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
H F +GD SHP +EIY KL+ L +K GYVP T V HD+ ++ K + HSE+
Sbjct: 704 TIHEFRAGDTSHPQAEEIYTKLETLIREIKVMGYVPDTSVVLHDMSDELKELCLLQHSEK 763
Query: 448 LAIAFGLINTPDGTR-LLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+A+AFGLI+ T+ + I KNL++C DCH A+K++SK T REI +RD NR+H KDG C
Sbjct: 764 IAVAFGLISCTSATKPIRIFKNLRVCVDCHSALKYVSKATGREIILRDSNRFHRMKDGEC 823
Query: 507 SCGDYW 512
SCG+YW
Sbjct: 824 SCGEYW 829
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 157/331 (47%), Gaps = 43/331 (12%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
V+A L+ LYS C + A +FD +P R+L W + + NG A+ L+ L
Sbjct: 85 VVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGETL 144
Query: 66 EIGLVPDNFTFPFALKAC--SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
E GL+P+ FT A +AC S L + G + W TDV VG ALIDM+AK
Sbjct: 145 EEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGD 204
Query: 124 VVNARQVFDKILER---------------------------------DPSEATLVTVISA 150
+V R+VFD + ER P + TL +++SA
Sbjct: 205 LVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSA 264
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC---GLVKVARNLFEQLREKRV 207
++ + G++LH + R E + V LVDMYAK + AR +F ++ + V
Sbjct: 265 CTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNV 324
Query: 208 VSWNAMITGYAMHG-HSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
++W A+++GY G + + LF KM +E ++P+HIT+ +L AC+ G D GR
Sbjct: 325 MAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHT 384
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
V+ D +V +V + SG ++EA
Sbjct: 385 HCVKSNLADLNVVG-NALVSMYAESGSIEEA 414
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 102/221 (46%), Gaps = 40/221 (18%)
Query: 89 IEEGRRIHEDVIRNK--WETDVFVGAALIDMYAKCSCVVNARQVFDKI------------ 134
I GR + ++R ETD V +L+ +Y+KCS V AR VFD +
Sbjct: 63 IHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTA 122
Query: 135 ----LERDPSEATLVTVISASADIAALPQ--------------------GRELHGFSWRH 170
L R+ +EA + + + + LP G + G ++
Sbjct: 123 MASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKL 182
Query: 171 RF-ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
F +V V AL+DM+AK G + R +F+ L E+ VV W +IT YA G+S +A++L
Sbjct: 183 GFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVEL 242
Query: 230 F-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
F + +++ QPD T +LSAC+ G F G+ +R
Sbjct: 243 FLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALR 283
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/531 (40%), Positives = 309/531 (58%), Gaps = 35/531 (6%)
Query: 17 YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDN-FT 75
Y+ L A +LFD +PQR+ F WN I Y + A+EL+ + N FT
Sbjct: 163 YAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFT 222
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL 135
AL A +A+ + G+ IH +IR + D V +AL+D+Y KC + AR +FD++
Sbjct: 223 LSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMK 282
Query: 136 ERD---------------------------------PSEATLVTVISASADIAALPQGRE 162
+RD P+E T V++A AD AA G+E
Sbjct: 283 DRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKE 342
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
+HG+ ++ +ALV MY+KCG +VAR +F ++ + +VSW ++I GYA +G
Sbjct: 343 VHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQ 402
Query: 223 STKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYT 281
+AL FE + + +PD +T+VGVLSAC+ GL D+G +F S+ + + + HY
Sbjct: 403 PDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYA 462
Query: 282 CMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPH 341
C++DLL SGR EA ++I M VKPD +W +LL C++HG+++LA+ A + L E+EP
Sbjct: 463 CVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPE 522
Query: 342 DAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPN 401
+ Y+ L+NIYA A W VA +RK M + GI K SWIE+K + H FL GD SHP
Sbjct: 523 NPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHPK 582
Query: 402 CDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGT 461
+I+ L L ++KE GYVP T V HDVE ++K + HSE+LA+ FG+I+TP GT
Sbjct: 583 TSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHSEKLAVVFGIISTPPGT 642
Query: 462 RLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ + KNL+ C DCH AIK+ISKI +R+ITVRD NR+H F+DG CSC DYW
Sbjct: 643 PIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDGSCSCKDYW 693
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 137/344 (39%), Gaps = 88/344 (25%)
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
A+EL +R P + + AC A+E GRR+H + + VF+ L+D
Sbjct: 74 AVELLHR---TDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLD 130
Query: 117 MYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
MYAKC +V+A+ +FD++ RD SW
Sbjct: 131 MYAKCGSLVDAQMLFDEMGHRDLC--------------------------SW-------- 156
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM--- 233
++ YAK G ++ AR LF+++ ++ SWNA I+GY H +AL+LF M
Sbjct: 157 ---NTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRH 213
Query: 234 ----------------------------------KDEVQPDHITFVGVLSACSRGGLFDE 259
+ E+ D + + +L + G DE
Sbjct: 214 ERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDE 273
Query: 260 GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL---IMQMRVKPDPGVWGALL 316
R F+ M D V +T M+ GR +E L +MQ V+P+ + +L
Sbjct: 274 ARGIFDQMK-----DRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVL 328
Query: 317 NSCKLHGHVKLAELALEKLIELEPHDAGNYVI--LSNIYARAAN 358
N+C H L + + + +D G++ I L ++Y++ N
Sbjct: 329 NACADHAAEHLGK-EVHGYMMHAGYDPGSFAISALVHMYSKCGN 371
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 129/291 (44%), Gaps = 43/291 (14%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+ + L+ LY C L A +FD++ R++ W +I +G E L+ L++
Sbjct: 256 VVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQS 315
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ P+ +TF L AC+ +A G+ +H ++ ++ F +AL+ MY+KC A
Sbjct: 316 GVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVA 375
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
R+VF+++ + D P + T V V+SA
Sbjct: 376 RRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHA 435
Query: 155 AALPQGRE-LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK-RVVSWNA 212
+ +G E H +H ++D+ A+ G K A N+ + + K W +
Sbjct: 436 GLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWAS 495
Query: 213 MITGYAMHGHSTKALDLFEKMKD---EVQPDH-ITFVGVLSACSRGGLFDE 259
++ G +HG+ L+L ++ E++P++ T++ + + + GL+ E
Sbjct: 496 LLGGCRIHGN----LELAKRAAKALYEIEPENPATYITLANIYANAGLWSE 542
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/548 (40%), Positives = 314/548 (57%), Gaps = 51/548 (9%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAW-----NGPYEVAIELYY 62
+L T+L+ S LH +H P FLWN LIRA+ GP I ++
Sbjct: 2 LLPTRLIS--STHPTLHFSH------PTLESFLWNTLIRAHVQARAQPTGPTHSPISIFV 53
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
R+ G+ PD TFPF L++ ++ S + GR +H ++R D FV +LI MY+
Sbjct: 54 RMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSSG 113
Query: 123 CVVNARQVFDKILERD------------------------------------PSEATLVT 146
V AR +F + ER+ P+E T+
Sbjct: 114 LVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSG 173
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL-REK 205
V++A + AL G+ H + + ++V + TAL+DMYAKCG V+ A +F L K
Sbjct: 174 VLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNK 233
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF 264
V++W+AMI+G AMHG + + + LF KM ++ V+P+ +TF+ V AC GGL EG+ +
Sbjct: 234 DVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYL 293
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
M DY I P++QHY CMVDL G +GR+ EA +++ M ++PD VWGALL+ ++HG
Sbjct: 294 RRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGD 353
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
++ ELAL+KLIELEP ++G YV+LSN+YA+ WE V +R LM GIKK CS IE
Sbjct: 354 IETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIE 413
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
V H F GD SHP +I+ L+ + R+K GYV T+ V D++ + K + H
Sbjct: 414 VGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKELALSLH 473
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SE+LA+A+G + T GT + I KNL+IC DCH+AIK ISK+ +REI VRD NR+HHF G
Sbjct: 474 SEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIVRDCNRFHHFTQG 533
Query: 505 ICSCGDYW 512
+CSC DYW
Sbjct: 534 LCSCRDYW 541
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 123/277 (44%), Gaps = 40/277 (14%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P + T L+ +YS+ + A LF +P+RN+ W+ +I Y G Y+ A+ L+
Sbjct: 94 GLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALF 153
Query: 62 YRLLEIG---LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
+ +G + P+ FT L AC L A+E G+ H + + DV +G ALIDMY
Sbjct: 154 REMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMY 213
Query: 119 AKCSCVVNARQV--------------------------------FDKILERD--PSEATL 144
AKC V A V F K++ + P+ T
Sbjct: 214 AKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTF 273
Query: 145 VTVISASADIAALPQGRE-LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL- 202
+ V A + +G++ L + + ++ +VD+Y + G +K A N+ + +
Sbjct: 274 LAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMP 333
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP 239
E V+ W A+++G MHG + +L K E++P
Sbjct: 334 MEPDVLVWGALLSGSRMHG-DIETCELALKKLIELEP 369
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/554 (38%), Positives = 329/554 (59%), Gaps = 50/554 (9%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWN-GPYEVAIELYYRLLEI 67
L K++ L S+ ++ A ++FD I + F+WN LIRA A + E A LY ++LE
Sbjct: 142 LYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLER 201
Query: 68 G-LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
G PD TFPF LKAC+ + EG+++H ++++ + DV+V LI +Y C C+
Sbjct: 202 GESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDL 261
Query: 127 ARQVFDKILER--------------------------------DPSEATLVTVISASADI 154
AR+VFD++ ER +P T+ +V+SA A +
Sbjct: 262 ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGL 321
Query: 155 AALPQGRELHGFSWRH---RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+L G H F R ++V VK +L++MY KCG +++A +F+ ++++ + SWN
Sbjct: 322 GSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWN 381
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE---VQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
AMI G+A HG + +A++ F++M D+ V+P+ +TFVG+L AC+ G ++GR +F+ MV
Sbjct: 382 AMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMV 441
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS-CKLHGHVKL 327
RDY I+P+++HY C+VDL+ +G + EA D++M M +KPD +W +LL++ CK V+L
Sbjct: 442 RDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVEL 501
Query: 328 AELALEKLIELEPHD-------AGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIAC 380
+E +I + + +G YV+LS +YA A+ W V +RKLM + GI+K C
Sbjct: 502 SEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGC 561
Query: 381 SWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPG-TESVFHDVEND-EKA 438
S IE+ +H F +GD SHP +IY +LK ++ R++ GY+P +++ D ND K
Sbjct: 562 SSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKE 621
Query: 439 NMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRY 498
+ HSERLAIAFGLIN P T + I KNL++C+DCH K ISK+ EI VRD R+
Sbjct: 622 YSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRF 681
Query: 499 HHFKDGICSCGDYW 512
HHFKDG CSC DYW
Sbjct: 682 HHFKDGSCSCLDYW 695
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/480 (42%), Positives = 303/480 (63%), Gaps = 39/480 (8%)
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ P++FT+ L A +S E +H I+ + VG AL+D Y K V A
Sbjct: 5 GIKPNDFTYSTILTAQPGVSPFE----MHAQAIKRNYVKSPSVGTALLDAYVKRGNVDEA 60
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISA-SAD 153
+VF +I E+D P+E T +I+A +A
Sbjct: 61 SKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAP 120
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
A + QG++LH +S + RF + V +AL+ MY+K G ++ A +F++ RE+ +VSWN++
Sbjct: 121 TAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSI 180
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I+GYA HG+ KAL++FE+M+ + ++ D +TF+GV+SAC+ GL +EG+ +F+ MV+D+H
Sbjct: 181 ISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHH 240
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I+P ++HY+CMVDL G +G L +A ++I +M VW LL + +H ++++ +LA
Sbjct: 241 IEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHRNLEVGKLAA 300
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
+KLI L+P + +YV+L+N+YA NW+ AK+RKLM ++ +KK SWIEVKNK + F
Sbjct: 301 DKLISLQPQNPASYVLLTNMYASVGNWKERAKVRKLMEEKKVKKVAGYSWIEVKNKTYTF 360
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
L+GD SHP ++IYAKL+ L ++K AGY P T VF DV+ + K ++ HSERLAIAF
Sbjct: 361 LAGDVSHPLSNQIYAKLEELSCQLKGAGYQPDTSYVFQDVDEEHKEAILSQHSERLAIAF 420
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
GLI TP GT L I KNL++C DCH IK IS + R+I VRD NR+HHFK G+CSCGDYW
Sbjct: 421 GLIGTPPGTPLQIVKNLRVCGDCHSVIKLISILEGRDIVVRDSNRFHHFKGGLCSCGDYW 480
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 115/233 (49%), Gaps = 8/233 (3%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P + T L+ Y + A ++F RI ++++ W+ +I YA G E A+ ++ ++ +
Sbjct: 41 PSVGTALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAK 100
Query: 67 IGLVPDNFTFPFALKACSALSA-IEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
+ P+ +TF + AC+A +A +E+G+++H I++++ + V +AL+ MY+K +
Sbjct: 101 EKIKPNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIE 160
Query: 126 NARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
+A +VF + ERD + ++IS A + E+ R E++ ++
Sbjct: 161 SAFEVFKRQRERDL--VSWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISA 218
Query: 186 YAKCGLVKVARNLFEQLR-----EKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
GL + F+ + E R+ ++ M+ Y G KA+++ +M
Sbjct: 219 CTHTGLANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEM 271
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 99/208 (47%), Gaps = 8/208 (3%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+++ L+ +YS + +A ++F R +R+L WN +I YA +G A+E++ +
Sbjct: 145 VSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQN 204
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN-KWETDVFVGAALIDMYAKCSCVVNA 127
L D TF + AC+ EG+R + ++++ E + + ++D+Y + +V A
Sbjct: 205 LEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGMLVKA 264
Query: 128 RQVFDKILERDPSEATL-VTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
++ +++ P+ A + T+++AS L G+ L N L +MY
Sbjct: 265 MEIINEM--PFPASANVWRTLLAASCIHRNLEVGK-LAADKLISLQPQNPASYVLLTNMY 321
Query: 187 AKCGLVK---VARNLFEQLREKRVVSWN 211
A G K R L E+ + K+V ++
Sbjct: 322 ASVGNWKERAKVRKLMEEKKVKKVAGYS 349
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/556 (39%), Positives = 322/556 (57%), Gaps = 46/556 (8%)
Query: 2 GFGFHPVLATKLVHLYS-----ACDCLHNAHQLFDRIPQRNLFLW-NVLIRAYAWNGPY- 54
G HP T+L+ L + A L A Q+FDRIP +W N L+R YA G
Sbjct: 57 GLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVVWYNTLLRGYARGGWGG 116
Query: 55 ---EVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG 111
E A ++ R++E G+ PD +TF LKAC++ A EEGR+ H ++ +V
Sbjct: 117 GCAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVA 176
Query: 112 AALIDMYAKCSCVVNARQVFDK--------------------------ILERD------- 138
LI+MYA+C V AR +FD+ +L R+
Sbjct: 177 PTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLK 236
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P+ TL++V+SA A + AL GR +H + + R + VKV TAL+DMYAKCG ++ A +
Sbjct: 237 PTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGV 296
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLF 257
F+ + + +W+ M+ YA HG+ +A+ +FE+MK + ++PD +TF+GVL ACS G+
Sbjct: 297 FQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMV 356
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
EG +F+SM R+Y I ++HY C+ DLL SG+L+ A I ++ +KP +W LL+
Sbjct: 357 SEGLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLS 415
Query: 318 SCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKS 377
+C HG V + + E+++EL+ G+YVI SN+ A WE + +RKLM ++G+ K
Sbjct: 416 ACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKV 475
Query: 378 IACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFH-DVENDE 436
CS IE+ N H F +GD SHP+ E + + ++K GYVP T VFH ++ +E
Sbjct: 476 PGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFHVEMGEEE 535
Query: 437 KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVN 496
KA + HSE+LAI+FGL+NT GT L I KNL++C DCH K +S + R I +RD+N
Sbjct: 536 KATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRRIILRDLN 595
Query: 497 RYHHFKDGICSCGDYW 512
R+HHF+DG+CSCGDYW
Sbjct: 596 RFHHFEDGVCSCGDYW 611
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/539 (40%), Positives = 310/539 (57%), Gaps = 35/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L TKL+ L A + +LF + + FL+N LI+A + G A+ Y R+L
Sbjct: 44 LLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSKFGFSLDAVLFYRRMLLSR 103
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+VP +TF +KAC+ LS + G +H V + + +D FV AALI YAK AR
Sbjct: 104 IVPSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGYASDSFVQAALIAFYAKSCTPRVAR 163
Query: 129 QVFDKILER---------------------------------DPSEATLVTVISASADIA 155
+VFD++ +R +P AT V+V+SA + +
Sbjct: 164 KVFDEMPQRSIVAWNSMISGYEQNGLANEAVEVFNKMRESRVEPDSATFVSVLSACSQLG 223
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+L G LH +NV + T+LV+M+++CG V AR +F + E VV W AMI+
Sbjct: 224 SLDFGCWLHDCIVGSGITMNVVLATSLVNMFSRCGDVGRARAVFYSMIEGNVVLWTAMIS 283
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GY MHG+ +A+++F +MK V P+ +TFV VLSAC+ GL DEGR F SM ++Y +
Sbjct: 284 GYGMHGYGVEAMEVFHRMKARGVVPNSVTFVAVLSACAHAGLIDEGRSVFASMKQEYGVV 343
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP-DPGVWGALLNSCKLHGHVKLAELALE 333
P V+H+ CMVD+ G G L+EA + + P VW A+L +CK+H + L E
Sbjct: 344 PGVEHHVCMVDMFGRGGLLNEAYQFVKGLNSDELVPAVWTAMLGACKMHKNFDLGVEVAE 403
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
LI EP + G+YV+LSN+YA A + V +R +MI RG+KK + S I+V N+++ F
Sbjct: 404 NLINAEPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVDNRSYLFS 463
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD SHP +EIY L L R K+AGY P ES H++E +E+ + HSE+LA+AFG
Sbjct: 464 MGDKSHPETNEIYCFLDELIWRCKDAGYAPVPESAMHELEGEEREYALRYHSEKLAVAFG 523
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+ T DG L I KNL+IC+DCH AIKFIS + REI VRD R+HHF++G CSC DYW
Sbjct: 524 LMKTGDGVTLRIVKNLRICEDCHSAIKFISAVMNREIIVRDKLRFHHFREGSCSCSDYW 582
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/541 (39%), Positives = 301/541 (55%), Gaps = 37/541 (6%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
H + T + LYS C + A LF + ++ +N +I Y NG E+++ L+ L+
Sbjct: 255 HDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELM 314
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G + T + L I IH +++ + + V AL +Y+K + +
Sbjct: 315 LSGAKLKSSTLVSLVPVSGHLMLIYA---IHGYSLKSNFLSHTSVSTALTTVYSKLNEIE 371
Query: 126 NARQVFDKILERD---------------------------------PSEATLVTVISASA 152
+AR++FD+ E+ P+ T+ ++SA A
Sbjct: 372 SARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACA 431
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+ AL G+ +H FE ++ V TAL+ MYAKCG + AR LF+ + +K V+WN
Sbjct: 432 QLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNT 491
Query: 213 MITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
MI+GY +HGH +AL +F +M + + P +TF+ VL ACS GL EG F SM+ Y
Sbjct: 492 MISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRY 551
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
+PSV+HY C+VD+LG +G L A I M ++P P VW LL +C++H LA
Sbjct: 552 GFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTV 611
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHA 391
EKL EL+P + G +V+LSNI++ N+ A +R+ R + K+ + IE+ H
Sbjct: 612 SEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHV 671
Query: 392 FLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIA 451
F SGD SHP I+ KL+ LEG+M+EAGY P TE HDVE +E+ M+ HSERLAIA
Sbjct: 672 FTSGDQSHPQVKAIHEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIA 731
Query: 452 FGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
FGLI T GT + I KNL++C DCH A K ISKITER I VRD NR+HHFKDG+CSCGDY
Sbjct: 732 FGLIATEPGTEIRIIKNLRVCLDCHTATKLISKITERVIVVRDANRFHHFKDGVCSCGDY 791
Query: 512 W 512
W
Sbjct: 792 W 792
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 162/352 (46%), Gaps = 40/352 (11%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-E 66
+L + +V +Y + +A ++FDR+P+++ LWN +I Y N Y +I+++ L+ E
Sbjct: 155 LLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINE 214
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
D T L A + L + G +IH + + +V I +Y+KC +
Sbjct: 215 SCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKM 274
Query: 127 ARQVFDKILERDP---------------------------------SEATLVTVISASAD 153
A +F + D +TLV+++ S
Sbjct: 275 ASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGH 334
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+ + +HG+S + F + V TAL +Y+K ++ AR LF++ EK + SWNAM
Sbjct: 335 LMLI---YAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAM 391
Query: 214 ITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I+GY +G + A+ LF +M++ E P+ +T +LSAC++ G G+ + +VR
Sbjct: 392 ISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGK-WVHDLVRSTD 450
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+ S+ T ++ + G + EA L M K + W +++ LHGH
Sbjct: 451 FESSIYVSTALIGMYAKCGSIAEARRLFDFMP-KKNEVTWNTMISGYGLHGH 501
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 128/267 (47%), Gaps = 35/267 (13%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF L TKL S ++ A +F + + ++FL+NVL+R ++ N ++ ++
Sbjct: 47 GFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVF 106
Query: 62 YRLLE-IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
L + L P++ T+ FA+ A S G IH I + ++++ +G+ ++ MY K
Sbjct: 107 AHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFK 166
Query: 121 CSCVVNARQVFDKILERDP----------------------------------SEATLVT 146
V +AR+VFD++ E+D TL+
Sbjct: 167 FWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLD 226
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ A A++ L G ++H + + + V T + +Y+KCG +K+A LF + R
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPD 286
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKM 233
+V++NAMI GY +G + +L LF+++
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKEL 313
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/522 (39%), Positives = 315/522 (60%), Gaps = 35/522 (6%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL-LEIGLVPDNFTFPFALKACS 84
A Q+F++I N+F WN +IR +A + A+EL+ ++ ++PD TFPF KA +
Sbjct: 88 AAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVA 147
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------ 138
L + G IH V+RN +++ FV +L+ MY+ +A QVF+ + RD
Sbjct: 148 KLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNS 207
Query: 139 ----------PSEA-----------------TLVTVISASADIAALPQGRELHGFSWRHR 171
P+EA T+V+++SA ++ AL G +H + +
Sbjct: 208 VINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVG 267
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
N AL+D+Y+KCG + A+ +F+++ E+ VVSW ++I G A++G +AL LF
Sbjct: 268 LVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFG 327
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+++ + ++P ITFVGVL ACS G+ DEG +F M +Y I P ++H+ CMVDLL +
Sbjct: 328 ELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRA 387
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
G++ +A D I M V P+ +W LL +C +HGH++L E+A ++ LE +G++V+LS
Sbjct: 388 GKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLS 447
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
N+YA W V +RK+M+ +G+KK+ S +E+KN+ + F+ GD SHP +E YA L
Sbjct: 448 NLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLA 507
Query: 411 WLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLK 470
+ +K GYVP T +V D+E +EK + H+E++AIAF L+NTP GT + I KNL+
Sbjct: 508 KITQLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLR 567
Query: 471 ICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+C DCH+AIK ISK+ EREI VRD +R+HHFKDG CSC DYW
Sbjct: 568 VCADCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 123/269 (45%), Gaps = 15/269 (5%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + LVH+YS +A+Q+F+ + R+ WN +I +A NG A+ LY
Sbjct: 166 GFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLY 225
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ PD FT L AC L A+ G R+H +++ + AL+D+Y+KC
Sbjct: 226 REMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKC 285
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRE-LHGFSWRHRFELNVKVKT 180
+A++VFD++ ER ++V+ S +A G E L F R L T
Sbjct: 286 GNFRDAQKVFDEMEER-----SVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEIT 340
Query: 181 ALVDMYA--KCGLVKVARNLFEQLREK-----RVVSWNAMITGYAMHGHSTKALDLFEKM 233
+ +YA CG++ N F +++E+ R+ M+ G A D M
Sbjct: 341 FVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNM 400
Query: 234 KDEVQPDHITFVGVLSACSRGGLFDEGRM 262
V P+ + + +L AC+ G + G +
Sbjct: 401 P--VPPNAVIWRTLLGACTIHGHLELGEV 427
>gi|224065074|ref|XP_002301657.1| predicted protein [Populus trichocarpa]
gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/501 (40%), Positives = 291/501 (58%), Gaps = 35/501 (6%)
Query: 47 AYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWET 106
Y+ NG A+ +Y +L + P NF F ALKAC+ L + GR +H V+++
Sbjct: 4 GYSKNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSSEGP 63
Query: 107 DVFVGAALIDMYAKCSCVVNARQVFDKILERDP--------------------------- 139
D V L+ +Y +C C +VFD++ ER+
Sbjct: 64 DQVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVKEDKLGEALDVFRRMQ 123
Query: 140 ------SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVK 193
S TL T++ A + AL G+E+H + +V V +LVDMY KCG+V
Sbjct: 124 REGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKSARRPDVLVLNSLVDMYVKCGVVD 183
Query: 194 VARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACS 252
R LF+ +R K + SWN M+TGYA++G+ A+DLF +M ++PD +TF+ +LS CS
Sbjct: 184 YGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRPDDVTFIALLSGCS 243
Query: 253 RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
GL ++G+ F M D+ + PS++HY C+VD+LG +GR+D A ++ M +K +W
Sbjct: 244 HAGLTEDGQKLFHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKTSGSIW 303
Query: 313 GALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDR 372
G+LLNSC+LH V LAE +L ELEP++ GNYV+LSNIYA A W+ V +R++M R
Sbjct: 304 GSLLNSCRLHNEVPLAEAIANRLFELEPYNPGNYVMLSNIYANAGMWDSVNMVREMMQTR 363
Query: 373 GIKKSIACSWIEVKNKAHAFLSGDA-SHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHD 431
I+K CSWI+VKNK H+F++G N DE L M+E GY+P T+ V HD
Sbjct: 364 RIRKEAGCSWIQVKNKIHSFVAGGGFEFRNSDEYKKIWNKLREAMEEFGYIPNTDVVLHD 423
Query: 432 VENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREIT 491
V + KA +C HSERLA F LI+T G + ITKNL++C DCH IK +S++T R I
Sbjct: 424 VNEETKAMWVCGHSERLATVFSLIHTAAGMPIRITKNLRVCVDCHSWIKIVSRVTGRVIV 483
Query: 492 VRDVNRYHHFKDGICSCGDYW 512
+RD NR+HHFK+G CSC DYW
Sbjct: 484 LRDTNRFHHFKEGACSCNDYW 504
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/554 (38%), Positives = 329/554 (59%), Gaps = 50/554 (9%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWN-GPYEVAIELYYRLLEI 67
L K++ L S+ ++ A ++FD I + F+WN LIRA A + E A LY ++LE
Sbjct: 76 LYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLER 135
Query: 68 G-LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
G PD TFPF LKAC+ + EG+++H ++++ + DV+V LI +Y C C+
Sbjct: 136 GESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDL 195
Query: 127 ARQVFDKILER--------------------------------DPSEATLVTVISASADI 154
AR+VFD++ ER +P T+ +V+SA A +
Sbjct: 196 ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGL 255
Query: 155 AALPQGRELHGFSWRH---RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+L G H F R ++V VK +L++MY KCG +++A +F+ ++++ + SWN
Sbjct: 256 GSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWN 315
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE---VQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
AMI G+A HG + +A++ F++M D+ V+P+ +TFVG+L AC+ G ++GR +F+ MV
Sbjct: 316 AMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMV 375
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS-CKLHGHVKL 327
RDY I+P+++HY C+VDL+ +G + EA D++M M +KPD +W +LL++ CK V+L
Sbjct: 376 RDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVEL 435
Query: 328 AELALEKLIELEPHD-------AGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIAC 380
+E +I + + +G YV+LS +YA A+ W V +RKLM + GI+K C
Sbjct: 436 SEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGC 495
Query: 381 SWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPG-TESVFHDVEND-EKA 438
S IE+ +H F +GD SHP +IY +LK ++ R++ GY+P +++ D ND K
Sbjct: 496 SSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKE 555
Query: 439 NMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRY 498
+ HSERLAIAFGLIN P T + I KNL++C+DCH K ISK+ EI VRD R+
Sbjct: 556 YSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRF 615
Query: 499 HHFKDGICSCGDYW 512
HHFKDG CSC DYW
Sbjct: 616 HHFKDGSCSCLDYW 629
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/544 (38%), Positives = 315/544 (57%), Gaps = 35/544 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F L L+H+Y C + +A +FD++ ++++ W LI YA N AI L
Sbjct: 82 FAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLP 141
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+L+ P+ FTF LKA A + GR+IH ++ W DV+VG+AL+DMYA+C
Sbjct: 142 GMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCG 201
Query: 123 CVVNARQVFDKI------------------------------LERDPSEATLVT---VIS 149
+ A VFDK+ + R+ EAT T V S
Sbjct: 202 KMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFS 261
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
+ A + AL QG+ +H + R +L V L+DMYAK G + AR +F+++ K +V+
Sbjct: 262 SIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVT 321
Query: 210 WNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WN+M+T +A +G +A+ FE+M K V + ITF+ +L+ACS GGL EG+ +FE M+
Sbjct: 322 WNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFE-MM 380
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
++Y ++P + HY +V LLG +G L+ A I +M ++P VWGALL +C++H + K+
Sbjct: 381 KEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVG 440
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
+ A + + EL+P D+G V+L NIYA W+ A++R +M G+KK ACSW+E++N
Sbjct: 441 QFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMENS 500
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
H F++ D +HP +EIY + ++++ GYVP + V V++ EK + HSE+L
Sbjct: 501 VHMFVANDDTHPQAEEIYKMWGEISKKIRKEGYVPDMDYVLLHVDDQEKEANLQYHSEKL 560
Query: 449 AIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
A+AF LI P G + I KN++IC DCH A K+ISK+ REI VRD NR+HHF G CSC
Sbjct: 561 ALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSSGSCSC 620
Query: 509 GDYW 512
GDYW
Sbjct: 621 GDYW 624
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 147/312 (47%), Gaps = 47/312 (15%)
Query: 64 LLEIG-LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
LL+ G L P + + AC+ +E+ R+IH + +++ D F+ +LI MY KC
Sbjct: 41 LLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCR 100
Query: 123 CVVNARQVFDKILERD---------------------------------PSEATLVTVIS 149
V++AR VFD++ +D P+ T +++
Sbjct: 101 SVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLK 160
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A+ A GR++H + + + +V V +AL+DMYA+CG + +A +F++L K VS
Sbjct: 161 AAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVS 220
Query: 210 WNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WNA+I+G+A G AL F E +++ + H T+ V S+ +R G ++G+
Sbjct: 221 WNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHA--- 277
Query: 269 RDYHIDPSVQHYTCMV-----DLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
H+ S Q T V D+ SG + +A + ++ K D W ++L + +G
Sbjct: 278 ---HVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNK-DLVTWNSMLTAFAQYG 333
Query: 324 HVKLAELALEKL 335
K A E++
Sbjct: 334 LGKEAVSHFEEM 345
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 7/204 (3%)
Query: 136 ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
E P+ + I+A A L R++H RF + + +L+ MY KC V A
Sbjct: 46 ELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDA 105
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRG 254
RN+F+Q+R K +VSW ++I GYA + +A+ L M K +P+ TF +L A
Sbjct: 106 RNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAY 165
Query: 255 GLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV-W 312
GR V+ +H D V + ++D+ G++D A + ++ K GV W
Sbjct: 166 ADSGTGRQIHALAVKCGWHEDVYVG--SALLDMYARCGKMDMATAVFDKLDSK--NGVSW 221
Query: 313 GALLNSCKLHGHVKLAELALEKLI 336
AL++ G + A + +++
Sbjct: 222 NALISGFARKGDGESALMTFAEML 245
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/547 (38%), Positives = 321/547 (58%), Gaps = 35/547 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
G G + + L +YS C + +A ++F+ +P ++ W +I Y+ G +E A+
Sbjct: 70 FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLA 129
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++++ + D L AC AL A + GR +H V++ +E+D+FVG AL DMY+K
Sbjct: 130 FKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSK 189
Query: 121 CSCVVNARQVF----------------DKILERD------------------PSEATLVT 146
+ +A VF D +E + P+E T +
Sbjct: 190 AGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSS 249
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+I A A+ AAL QG +LH + F+ + V + LVDMY KCGL++ A F+++ +
Sbjct: 250 LIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPT 309
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
++WN++++ + HG A+ +FE+M D V+P+ ITF+ +L+ CS GL +EG +F
Sbjct: 310 EIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFY 369
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
SM + Y + P +HY+C++DLLG +GRL EA + I +M +P+ W + L +C++HG
Sbjct: 370 SMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDK 429
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
++ +LA EKL++LEP ++G V+LSNIYA WE V +R M D +KK SW++V
Sbjct: 430 EMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDV 489
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
K H F + D SHP IY KL L ++K AGYVP T+SV D+++ K ++ HS
Sbjct: 490 GYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHS 549
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
ER+A+AF LI+ P G +++ KNL++C DCH AIKFISK+T R+I VRD +R+HHF DG
Sbjct: 550 ERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGS 609
Query: 506 CSCGDYW 512
CSCGDYW
Sbjct: 610 CSCGDYW 616
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 163/341 (47%), Gaps = 39/341 (11%)
Query: 33 IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+PQRNL W +I + N + AI + + G VP F F A++AC++L +IE G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 93 RRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEAT--------- 143
+++H ++ +++FVG+ L DMY+KC + +A +VF+++ +D T
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 144 ------------------------LVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
L + + A + A GR +H + FE ++ V
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKR-VVSWNAMITGYAMHGHSTKALDLFEKMKDE-V 237
AL DMY+K G ++ A N+F E R VVS+ +I GY K L +F +++ + +
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+P+ TF ++ AC+ ++G +++ ++ DP V + +VD+ G G L++A
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEQA 298
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
++ P W +L++ HG K A E++++
Sbjct: 299 IQAFDEIG-DPTEIAWNSLVSVFGQHGLGKDAIKIFERMVD 338
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/524 (38%), Positives = 312/524 (59%), Gaps = 34/524 (6%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L A +LFD +P RN+ WN ++ +G E ++ ++ + G+ PD + +
Sbjct: 16 LETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRC 75
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC-------------------SC 123
C+ L + GR++H V+R+ + D+ VG++L MY +C SC
Sbjct: 76 CAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSC 135
Query: 124 --VVNARQV---------FDKILERDPSEATLVTVISA---SADIAALPQGRELHGFSWR 169
++ R F ++ EA VT +SA +D+AAL QG+++H + +
Sbjct: 136 NTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIK 195
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
+ V V T+LV MY++CG + + + + +V +AMI+ Y HGH KA+ L
Sbjct: 196 TGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGL 255
Query: 230 FEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
F++M +P+ +TF+ +L ACS GL DEG FE M + Y + PSV+HYTC+VDLLG
Sbjct: 256 FKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLG 315
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
SG L+EA DLI+ M V+PD +W LL++CK +AE E++IEL+PHD+ +YV+
Sbjct: 316 RSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVL 375
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAK 408
LSNI A ++ WE V+K+R+ M ++ ++K SW+E+K + H F +GD SH EI
Sbjct: 376 LSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVEC 435
Query: 409 LKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKN 468
L+ + R+++ GY P VFHD+E++EK + HSE+LAIAF ++ P+G + + KN
Sbjct: 436 LEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKN 495
Query: 469 LKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L++CDDCH+AIK +SK+ REI VRDV+R+HHFKDG CSCGDYW
Sbjct: 496 LRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPD 240
L+ Y K G ++ AR LF+++ + V +WNAM+ G G + ++L F M+ E +QPD
Sbjct: 6 LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 65
Query: 241 HITFVGVLSACSRGGLFD--EGRMFFESMVR 269
+ C+ GL D GR +VR
Sbjct: 66 EYGLGSLFRCCA--GLRDVVSGRQVHAYVVR 94
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/515 (40%), Positives = 315/515 (61%), Gaps = 13/515 (2%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFD-RIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
G G + + + +Y++ L A ++ D + + + WN +I Y G E A EL
Sbjct: 167 GLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAAREL 226
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + + ++ T+ + S +E R +++ E D +A+ID Y +
Sbjct: 227 FEGMPDRSMIS---TWNAMISGFSRCGMVEVAREFFDEMK----ERDEISWSAMIDGYIQ 279
Query: 121 CSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
C + A ++F ++ + P + L +V+SA A++ AL QGR +H ++ R+ +L+ +
Sbjct: 280 EGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVL 339
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ 238
T+LVDMYAKCG + +A +FE++ K V SWNAMI G AMHG + A+DLF KM ++
Sbjct: 340 GTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM--DIN 397
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
P+ ITFVGVL+AC+ GGL +G F SM ++Y ++P ++HY C+VDLLG +G L EA
Sbjct: 398 PNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEK 457
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN 358
++ + +P P VWGALL +C+ HG+V+L E + L+ELEP ++G Y +LSNIYA+A
Sbjct: 458 VVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGR 517
Query: 359 WEGVAKLRKLMIDRGIKKSIACSWIEV-KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK 417
WE V ++RKLM +RGIK + S I++ + + H F+ GD SHP +IY L ++ R++
Sbjct: 518 WEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQ 577
Query: 418 EAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHI 477
GY P V D++ +EK + HSE+LAI FGLINT GT + I KNL++C+DCH
Sbjct: 578 MEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHS 637
Query: 478 AIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
A K IS++ REI VRD RYHHF++G CSC D+W
Sbjct: 638 ATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 672
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 164/318 (51%), Gaps = 12/318 (3%)
Query: 28 QLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALS 87
++FD + + N+FLWN +I+ N AI LYY ++ P+ +T+P LKACS
Sbjct: 92 RVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAG 151
Query: 88 AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF-DKILERDPSEATLVT 146
+ EG ++H ++++ D + ++ I MYA +V AR++ DK E D
Sbjct: 152 VVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDA--VCWNA 209
Query: 147 VISASADIAALPQGREL-HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+I + REL G R + A++ +++CG+V+VAR F++++E+
Sbjct: 210 MIDGYLRFGEVEAARELFEGMPDRSM----ISTWNAMISGFSRCGMVEVAREFFDEMKER 265
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
+SW+AMI GY G +AL++F +M K++++P VLSAC+ G D+GR +
Sbjct: 266 DEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGR-WI 324
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+ + I T +VD+ GR+D A ++ +M K + W A++ +HG
Sbjct: 325 HTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNK-EVSSWNAMIGGLAMHGR 383
Query: 325 VKLAELALEKLIELEPHD 342
+ A + L +++ P++
Sbjct: 384 AEDA-IDLFSKMDINPNE 400
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/531 (37%), Positives = 308/531 (58%), Gaps = 35/531 (6%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFT 75
+Y C + +A +FD++P R++ W LI YA N AI L +L P+ FT
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL 135
F LKA A G ++H ++ W+ DV+VG+AL+DMYA+C + A VFD+++
Sbjct: 61 FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120
Query: 136 ERDP---------------SEATLV------------------TVISASADIAALPQGRE 162
++ E TL+ ++ SA A I AL QGR
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
+H + +L V ++ MYAK G + AR +F+++ ++ +V+WN M+T A +G
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240
Query: 223 STKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYT 281
+A+ FE+++ +Q + ITF+ VL+ACS GGL EG+ +F+ M++DY++ P + HY
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFD-MMKDYNVQPEIDHYV 299
Query: 282 CMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPH 341
VDLLG +G L EA + +M ++P VWGALL +C++H + K+ + A + + EL+P
Sbjct: 300 SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPD 359
Query: 342 DAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPN 401
D G V+L NIYA W A++RK+M G+KK ACSW++++N H F++ D +HP
Sbjct: 360 DTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPK 419
Query: 402 CDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGT 461
+IY + + R+K+AGYVP T V + E+ + HSE++A+AF LIN P G
Sbjct: 420 SGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGA 479
Query: 462 RLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ I KN++IC DCH A K++SK+ +REI VRD NR+HHF +G CSCGDYW
Sbjct: 480 SIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/514 (40%), Positives = 317/514 (61%), Gaps = 12/514 (2%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G G + + +H+Y++ L +A ++F + ++ WN +I Y G E A L+
Sbjct: 162 GIGSDVHIKSAGIHMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKGLF 220
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ V + ++ + + + + R++ +++ E D ++++D Y
Sbjct: 221 AQMP----VKNIGSWNVMINGLAKGGNLGDARKLFDEMS----ERDEISWSSMVDGYISA 272
Query: 122 SCVVNARQVFDKIL--ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
A ++F ++ E P L +V++A ++I A+ QGR +H + R+ +L+ +
Sbjct: 273 GRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLG 332
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQ 238
TAL+DMYAKCG + + +FE+++E+ + +WNAMI G A+HG + AL+LF K+++ ++
Sbjct: 333 TALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMK 392
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
P+ IT VGVL+AC+ G D+G F++M Y +DP ++HY CMVDLLG SG EA D
Sbjct: 393 PNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAED 452
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN 358
LI M +KP+ VWGALL +C++HG+ LAE + L+ELEP ++G YV+LSNIYA+
Sbjct: 453 LINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGR 512
Query: 359 WEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKE 418
++ V+K+RKLM DRGIK S +++ H F GD SHP EIY KLK ++ R++
Sbjct: 513 FDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQM 572
Query: 419 AGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIA 478
AG+ P T V D++ +EK + HSE+LAIAFGLINT G R+ I KNL++CDDCH A
Sbjct: 573 AGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSA 632
Query: 479 IKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
K IS+I +REI VRD RYHHFK+G CSC D+W
Sbjct: 633 TKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 163/318 (51%), Gaps = 20/318 (6%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A ++F IP N+F+WN++I+ N AI Y R++ I P+ FT+P KACS
Sbjct: 86 ALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSV 144
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLV 145
A++EGR+IH V+++ +DV + +A I MYA + +AR++F E+ +V
Sbjct: 145 AQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYS------GESDVV 198
Query: 146 ---TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T+I L + L + N+ +++ AK G + AR LF+++
Sbjct: 199 CWNTMIDGYLKCGVLEAAKGL----FAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEM 254
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGR 261
E+ +SW++M+ GY G +AL++F++M ++E +P VL+ACS G D+GR
Sbjct: 255 SERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGR 314
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
+ R+ I T ++D+ GRLD ++ +M+ + + W A++ +
Sbjct: 315 WVHAYLKRN-SIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKER-EIFTWNAMIGGLAI 372
Query: 322 HGHVKLAELALEKLIELE 339
HG AE ALE +L+
Sbjct: 373 HGR---AEDALELFSKLQ 387
>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/545 (37%), Positives = 319/545 (58%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P++A L++ YS ++ + F+ PQ++ W+ +I +A N +++E
Sbjct: 45 GLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIISCFAQNELPWMSLEFL 104
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+++ L PD+ P A K+C LS + G+ +H ++ ++ DVFVG++L+DMYAKC
Sbjct: 105 RKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKC 164
Query: 122 SCVVNARQVFDKILERDP---------------------------------SEATLVTVI 148
+V AR++FD++ R+ ++ + TVI
Sbjct: 165 GEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVI 224
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
S A+ L GR++ G + F+ + V ++LV +Y+KCG ++ A +F+++ + +
Sbjct: 225 SVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVPMRNLG 284
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
WNAM+ A H H+ K ++LF++MK ++P+ ITF+ VL+ACS GL DEG+ +F+ +
Sbjct: 285 IWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGKYYFD-L 343
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+++ I+P+ +HY +VD+LG +G+L+EA +++ M + P VWGALL SC +H + +L
Sbjct: 344 MKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESVWGALLTSCTIHKNTEL 403
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
A A +K+ EL P +G ++ LSN YA +E AK RKL+ DRG KK SW+E +N
Sbjct: 404 AAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERN 463
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K H F +G+ H EIY KL L M++AGYV T V +V+ DEK I HSER
Sbjct: 464 KVHTFAAGERRHERSKEIYEKLAELGEEMEKAGYVADTSYVLREVDGDEKNQTIRYHSER 523
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGLI P + + KNL++C DCH AIKF+S T R I VRD NR+H F+DG CS
Sbjct: 524 LAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSICTRRVIIVRDNNRFHRFEDGKCS 583
Query: 508 CGDYW 512
C DYW
Sbjct: 584 CNDYW 588
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 20/187 (10%)
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
+SA ++ +G +LHG+ + L V L++ Y+K L +R FE +K +
Sbjct: 24 SSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATT 83
Query: 210 WNAMITGYAMHGHSTKALDLFEKM-------KDEVQPDHITFVGVLSACSRGGLFDEGRM 262
W+++I+ +A + +L+ KM D V P G+LS C G +
Sbjct: 84 WSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIG-----KSV 138
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
SM Y D V + +VD+ G + A + +M ++ + W + ++
Sbjct: 139 HCLSMKTGYDADVFVG--SSLVDMYAKCGEIVYARKMFDEMPLR-NVVTWSGM-----MY 190
Query: 323 GHVKLAE 329
G+ ++ E
Sbjct: 191 GYAQMGE 197
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/578 (37%), Positives = 316/578 (54%), Gaps = 73/578 (12%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIP----QRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
V + L+ Y+ CL ++ + + N+ WN ++ + +G ++ A+ ++ +
Sbjct: 183 VTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQK 242
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
+ +G PD T L + + GR IH VI+ D V +A+IDMY K
Sbjct: 243 IHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGH 302
Query: 124 VVNARQVF------------------------DKILE------RDPSEATLV---TVISA 150
V +F DK LE E +V ++I+
Sbjct: 303 VYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAG 362
Query: 151 SA----DIAALPQGREL-------------------------------HGFSWRHRFELN 175
A DI AL RE+ HGF+ R N
Sbjct: 363 CAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDN 422
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK-MK 234
V V +AL+DMYAKCG + +++ +F + K +V WN+++ G++MHG + + + +FE M+
Sbjct: 423 VHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMR 482
Query: 235 DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLD 294
++PD I+F +LSAC + GL DEG +F+ M +Y I P ++HY+CMV+LLG +G+L
Sbjct: 483 TRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQ 542
Query: 295 EACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYA 354
EA DLI +M +PD VWGALLNSC+L +V LAE+A EKL LEP + G YV+LSNIYA
Sbjct: 543 EAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYA 602
Query: 355 RAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEG 414
W V +R M G+KK+ CSWI+VKN+ + L+GD SHP D+I K+ +
Sbjct: 603 AKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISK 662
Query: 415 RMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDD 474
M+++G+ P + HDVE E+ M+ HSE+LA+ FGL+NTPDGT L + KNL+IC D
Sbjct: 663 EMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGD 722
Query: 475 CHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
CH IKFIS REI +RD NR+HHFKDGICSCGD+W
Sbjct: 723 CHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/473 (22%), Positives = 184/473 (38%), Gaps = 108/473 (22%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++ KL+ YS +C ++A + IP ++ ++ LI A + +I ++ R+ G
Sbjct: 52 ISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHG 111
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIH-------------------------------E 97
L+PD+ P K C+ LSA + G++IH
Sbjct: 112 LIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDAR 171
Query: 98 DVIRNKWETDVFVGAALIDMYAKCSCVVNARQV--------------------------- 130
V + DV +AL+ YA+ C+ ++
Sbjct: 172 KVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSG 231
Query: 131 --------FDKI--LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
F KI L P + T+ +V+ + D L GR +HG+ + + V +
Sbjct: 232 YHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVIS 291
Query: 181 ALVDMYAKC-------------------------------GLVKVARNLFEQLREK---- 205
A++DMY K GLV A +FE +E+
Sbjct: 292 AMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMEL 351
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
VVSW ++I G A +G +AL+LF +M+ V+P+H+T +L AC GR
Sbjct: 352 NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTH 411
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
VR + +D +V + ++D+ GR++ + ++ M + W +L+N +HG
Sbjct: 412 GFAVRVHLLD-NVHVGSALIDMYAKCGRINLS-QIVFNMMPTKNLVCWNSLMNGFSMHGK 469
Query: 325 VKLAELALEKLI--ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIK 375
K E L+ L+P +LS EG + + + GIK
Sbjct: 470 AKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIK 522
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/524 (38%), Positives = 312/524 (59%), Gaps = 34/524 (6%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L A +LFD +P RN+ WN ++ +G E ++ ++ + G+ PD + +
Sbjct: 124 LETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRC 183
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC-------------------SC 123
C+ L + GR++H V+R+ + D+ VG++L MY +C SC
Sbjct: 184 CAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSC 243
Query: 124 --VVNARQV---------FDKILERDPSEATLVTVISA---SADIAALPQGRELHGFSWR 169
++ R F ++ EA VT +SA +D+AAL QG+++H + +
Sbjct: 244 NTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIK 303
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
+ V V T+LV MY++CG + + + + +V +AMI+ Y HGH KA+ L
Sbjct: 304 TGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGL 363
Query: 230 FEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
F++M +P+ +TF+ +L ACS GL DEG FE M + Y + PSV+HYTC+VDLLG
Sbjct: 364 FKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLG 423
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
SG L+EA DLI+ M V+PD +W LL++CK +AE E++IEL+PHD+ +YV+
Sbjct: 424 RSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVL 483
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAK 408
LSNI A ++ WE V+K+R+ M ++ ++K SW+E+K + H F +GD SH EI
Sbjct: 484 LSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVEC 543
Query: 409 LKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKN 468
L+ + R+++ GY P VFHD+E++EK + HSE+LAIAF ++ P+G + + KN
Sbjct: 544 LEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKN 603
Query: 469 LKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L++CDDCH+AIK +SK+ REI VRDV+R+HHFKDG CSCGDYW
Sbjct: 604 LRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 647
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 83/214 (38%), Gaps = 45/214 (21%)
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
E +R GL + F +AC AL + R++H + D F L+ Y
Sbjct: 31 EALHRRFREGLWSEPGLFSHIFRACQALPLL---RQLHAFAATSGAAADRFTANHLLLAY 87
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
A AR +F++I +R+ SW
Sbjct: 88 ADLGDFPTARGLFERIPKRNV--------------------------MSW---------- 111
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-V 237
L+ Y K G ++ AR LF+++ + V +WNAM+ G G + ++L F M+ E +
Sbjct: 112 -NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGM 170
Query: 238 QPDHITFVGVLSACSRGGLFD--EGRMFFESMVR 269
QPD + C+ GL D GR +VR
Sbjct: 171 QPDEYGLGSLFRCCA--GLRDVVSGRQVHAYVVR 202
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/545 (37%), Positives = 315/545 (57%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + L+ +Y+ C + A +FD +P+R++ WN ++ Y NG ++ ++L+
Sbjct: 151 GFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLF 210
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++LE+ + D+ T L AC L+ +E G I E ++ + + +LIDMYAKC
Sbjct: 211 RKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKC 270
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
V AR++FD++ +RD P+E T+V+V+
Sbjct: 271 GQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVL 330
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+ A + A G+ +H + + + +L V + T L+D YAKCG + + +F+++ K V
Sbjct: 331 YSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVF 390
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W A+I G A +G AL+ F M +++V+P+ +TF+GVLSACS L D+GR F SM
Sbjct: 391 TWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSM 450
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
RD+ I+P ++HY CMVD+LG +G L+EA I M P+ VW LL SC+ H ++++
Sbjct: 451 RRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEM 510
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE +LE + LEP +G+Y++LSN YA E ++R L+ ++ IKK CS IE+
Sbjct: 511 AEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDG 570
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
H F S D H + EI+ L + ++K GYVP T+ + E + K + HSE+
Sbjct: 571 VVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLEAEEESKETSVSHHSEK 630
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIA+GLI T T + I+KNL++C DCH A KFIS++ ER I VRD NR+HHFKDG+CS
Sbjct: 631 LAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFHHFKDGLCS 690
Query: 508 CGDYW 512
C DYW
Sbjct: 691 CNDYW 695
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 182/366 (49%), Gaps = 38/366 (10%)
Query: 21 DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
D + A +F+ I + +NV+IR A+ + A+ L+ ++ E + D FTF L
Sbjct: 69 DTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVL 128
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER--- 137
KACS + A+ EG ++H ++++ ++++ FV LI MYA C + AR VFD + ER
Sbjct: 129 KACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIV 188
Query: 138 ------------------------------DPSEATLVTVISASADIAALPQGRELHGFS 167
+ + T+++V+ A +A L G + +
Sbjct: 189 AWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYI 248
Query: 168 WRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKAL 227
N + T+L+DMYAKCG V AR LF+++ ++ VV+W+AMI+GYA +AL
Sbjct: 249 VSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEAL 308
Query: 228 DLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDL 286
+LF +M K V P+ +T V VL +C+ G ++ G+ + ++ + +V T ++D
Sbjct: 309 NLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGK-WVHFYIKKKKMKLTVTLGTQLIDF 367
Query: 287 LGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHDAG 344
G +D + ++ +M K + W AL+ +G K+A ++E ++P+D
Sbjct: 368 YAKCGYIDRSVEVFKEMSFK-NVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVT 426
Query: 345 NYVILS 350
+LS
Sbjct: 427 FIGVLS 432
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 95/248 (38%), Gaps = 47/248 (18%)
Query: 192 VKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSA 250
+ A ++F + + ++N MI G A AL LF+KM ++ VQ D TF VL A
Sbjct: 71 IDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKA 130
Query: 251 CSRGGLFDEGRM--------------FFESM----------------VRDYHIDPSVQHY 280
CSR EG F E+ V D + S+ +
Sbjct: 131 CSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAW 190
Query: 281 TCMVDLLGHSGRLDEACDL---IMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
M+ +G DE L I+++R++ D ++L +C ++++ EL E ++
Sbjct: 191 NSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVS 250
Query: 338 LEPHDAGNYVI-LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGD 396
L ++YA+ + KL M R + +W A +SG
Sbjct: 251 KGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDV-----VAW-------SAMISGY 298
Query: 397 ASHPNCDE 404
A C E
Sbjct: 299 AQADRCKE 306
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/561 (37%), Positives = 318/561 (56%), Gaps = 56/561 (9%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL +KLV +Y C L ++FD++ +FLWN+L+ YA G + ++ L+ R+ E+
Sbjct: 137 VLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMREL 196
Query: 68 GLVP--------------DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDV----- 108
G+ D ++ + + E+G + E ++ TD+
Sbjct: 197 GIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVS 256
Query: 109 ---FVGAALIDMYAKCSCVVNARQVFDKILERD--------------------------- 138
+ L+DMY+K + +A QVF+ + ER
Sbjct: 257 VELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEM 316
Query: 139 ------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLV 192
P+ T+ ++ A A +AAL +G+E+HG R+ F L+ V ALVDMY KCG +
Sbjct: 317 EKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGAL 376
Query: 193 KVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSAC 251
+AR LF+ + EK +VSW MI GY MHG+ ++A+ F +M++ ++PD ++F+ +L AC
Sbjct: 377 GLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYAC 436
Query: 252 SRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV 311
S GL DEG FF M + I+P +HY C+VDLL +G L +A I M ++PD +
Sbjct: 437 SHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATI 496
Query: 312 WGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMID 371
WGALL C+++ VKLAE E + ELEP + G YV+L+NIYA A WE V KLR+ +
Sbjct: 497 WGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGR 556
Query: 372 RGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHD 431
RG++K+ CSWIE+K K H F++GD+SHP ++I LK RMKE G+ P
Sbjct: 557 RGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIK 616
Query: 432 VENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREIT 491
++ EK +C HSE++A+AFG+++ P G + +TKNL++C DCH KF+SK+ +R+I
Sbjct: 617 ADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDII 676
Query: 492 VRDVNRYHHFKDGICSCGDYW 512
+RD NR+HHFKDG CSC +W
Sbjct: 677 LRDSNRFHHFKDGSCSCRGHW 697
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 159/354 (44%), Gaps = 51/354 (14%)
Query: 5 FHPVLATKLV--HLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F P T LV +LY +C + + + I + + +N+ I + G A+EL
Sbjct: 34 FRPSSKTPLVSSNLYHSCATIGTSVLPSETIDCK-ITDYNIEICRFCELGNLRRAMELIN 92
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+ + L + T+ L+ C+ L +I++GRRIH + N E D +G+ L+ MY C
Sbjct: 93 QSPKPDL--ELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCG 150
Query: 123 CVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
+ R++FDK+ L +++ A I + L ++ EL ++
Sbjct: 151 DLREGRRIFDKVANEKVFLWNL--LMNGYAKIGNFRESLSL----FKRMRELGIR----- 199
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDH 241
V+ AR LF++L ++ V+SWN+MI+GY +G S K LDLFE+M + D
Sbjct: 200 --------RVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDL 251
Query: 242 ITFVGV---LSAC-----SRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
T V V L+ C S+ G + FE+M + SV +T M+ G
Sbjct: 252 ATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMG-----ERSVVSWTSMIAGYAREGLS 306
Query: 294 DEACDLIMQMRVK---PDPGVWGALLNSC----------KLHGHVKLAELALEK 334
D + L +M + P+ +L +C ++HGH+ +L++
Sbjct: 307 DMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDR 360
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 23/256 (8%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF +A LV +Y C L A LFD IP+++L W V+I Y +G AI +
Sbjct: 355 GFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAF 414
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK--WETDVFVGAALIDMYA 119
+ G+ PD +F L ACS ++EG +++RN E A ++D+ A
Sbjct: 415 NEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFF-NMMRNNCCIEPKSEHYACIVDLLA 473
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL---NV 176
+ + A + F K++ +P +AT+ + I +L H FEL N
Sbjct: 474 RAGNLSKAYK-FIKMMPIEP-DATIWGALLCGCRIY---HDVKLAEKVAEHVFELEPENT 528
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQ-----LREKRVVSW-------NAMITGYAMHGHST 224
L ++YA+ + + L E+ LR+ SW + +TG + H +
Sbjct: 529 GYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLAN 588
Query: 225 KALDLFEKMKDEVQPD 240
K L +K + ++ +
Sbjct: 589 KIELLLKKTRTRMKEE 604
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/590 (36%), Positives = 331/590 (56%), Gaps = 78/590 (13%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + + ++ ++ C + A + F+ I +++F+WN+++ Y G ++ A+ +
Sbjct: 140 IGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNV 199
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR-NKWETDVFVGAALIDMYA 119
+ +++ G+ P++ T A+ AC+ LS + GR IH I+ + ++D+ VG +L+D YA
Sbjct: 200 FRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYA 259
Query: 120 KCSCVVNARQVFDKILERDP-----------------------------------SEATL 144
KC V AR+ F I + D SE +
Sbjct: 260 KCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELST 319
Query: 145 VTVISASADIAALPQ-GRELHGFSWRHRFEL-NVKVKTALV------------------- 183
V+ ++ I+A Q GR ++ L NV+V T +
Sbjct: 320 RDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEI 379
Query: 184 -DMYAKCGL-------------------VKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
+CGL ++ +R +F+ + ++ +VSWN MI+ Y MHG
Sbjct: 380 HQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFG 439
Query: 224 TKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTC 282
A++LF++ + ++P+HITF +LSACS GL +EG +F+ M +Y +DP+V+ Y C
Sbjct: 440 MDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYAC 499
Query: 283 MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHD 342
MVDLL +G+ +E + I +M +P+ VWG+LL +C++H + LAE A L ELEP
Sbjct: 500 MVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQS 559
Query: 343 AGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNC 402
+GNYV+++NIY+ A WE AK+R LM +RG+ K CSWIEVK K H+F+ GD SHP
Sbjct: 560 SGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLM 619
Query: 403 DEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTR 462
++I AK++ L +KE GYVP T V DV+ DEK +C HSE++A+AFGLI+T GT
Sbjct: 620 EQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTP 679
Query: 463 LLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L I KNL++C DCH A KFISK+ +R+I +RD R+HHF DG+CSCGDYW
Sbjct: 680 LRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 729
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 151/290 (52%), Gaps = 43/290 (14%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L ++L+ +Y C+ +A ++FD++ +RN+F W ++ Y G YE I+L+Y ++ G
Sbjct: 47 LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG 106
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD+F FP KACS L G+ +++ ++ +E + V +++DM+ KC + AR
Sbjct: 107 VRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIAR 166
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+ F++I +D P+ T+ + +SA +++
Sbjct: 167 RFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLS 226
Query: 156 ALPQGRELHGFSWR-HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM- 213
L GRE+HG+ + + ++ V +LVD YAKC V+VAR F +++ +VSWNAM
Sbjct: 227 LLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAML 286
Query: 214 -ITGYAMHGHSTKALDLFEKM-------KDEVQPDHITFVGVLSACSRGG 255
+TG+ +G AL+ F++M + D + + ++SAC++ G
Sbjct: 287 AVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSG 336
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 121/271 (44%), Gaps = 35/271 (12%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
L+ C L + G ++H ++ N + F+G+ L+++Y + CV +AR++FDK+ ER+
Sbjct: 17 LQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNV 76
Query: 139 --------------------------------PSEATLVTVISASADIAALPQGRELHGF 166
P V A +++ G++++ +
Sbjct: 77 FSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDY 136
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
FE N VK +++DM+ KCG + +AR FE++ K V WN M++GY G KA
Sbjct: 137 MLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKA 196
Query: 227 LDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
L++F KM E V+P+ IT +SAC+ L GR ++ +D + +VD
Sbjct: 197 LNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVD 256
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
R E M + D W A+L
Sbjct: 257 YYAKC-RSVEVARRKFGMIKQTDLVSWNAML 286
>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/527 (37%), Positives = 321/527 (60%), Gaps = 35/527 (6%)
Query: 21 DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
+ ++ A +F I F + +IR Y +EVA+ Y ++E G+ PDNFT+P L
Sbjct: 81 NSMNYAASIFRGIDDPCTFDFKTMIRGYVNEMSFEVALCFYNEMMERGIEPDNFTYPCLL 140
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPS 140
KAC+ L AI EG++IH V + E DVFV +LI+MY +C + + VF+K+ + +
Sbjct: 141 KACTRLKAIREGKQIHGHVFKLGLEADVFVQNSLINMYGRCGEMELSSTVFEKLEFKSAA 200
Query: 141 ----------------------------------EATLVTVISASADIAALPQGRELHGF 166
E+ +V+ +SA A+ AL G +HGF
Sbjct: 201 SWSSMFSACVGMGMWSECLMLFREMCRETNLKAEESGMVSALSACANTGALNLGMSIHGF 260
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
R+ ELN+ VKT+LVDMY KCG + A ++F+++ ++ ++++AMI+G+A+HG A
Sbjct: 261 LLRNISELNIIVKTSLVDMYVKCGCIDNALHIFQKMEKRNNLTYSAMISGFALHGEGESA 320
Query: 227 LDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
L +F +M K+ ++PDH+ +V +L+ACS GL EGR F M+++ ++P+ +HY C+VD
Sbjct: 321 LRMFSEMIKEGLEPDHVVYVSLLNACSHSGLVKEGRRVFGEMLKEGKVEPTAEHYGCLVD 380
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGN 345
LLG +G L+EA + I + ++ + VW + L+ C++H +++L ++A ++L++L H+ G+
Sbjct: 381 LLGRAGLLEEALETIQSIPIEQNDVVWRSFLSQCRVHQNIELGQIAAQELLKLCSHNPGD 440
Query: 346 YVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEI 405
Y+++SN+Y++A W+ VA+ R + +G+K++ S ++VK K H F+S D SHP C EI
Sbjct: 441 YLLISNMYSQAHMWDDVARSRTEIAIKGLKQTPGFSTVKVKGKTHRFVSQDRSHPQCKEI 500
Query: 406 YAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLI 465
Y L +E ++K GY P + +V+ +EK + HS+++AIAF L+ TP G+ + I
Sbjct: 501 YKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFALLYTPPGSIIKI 560
Query: 466 TKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+NL++C DCH K IS I EREI VRD NR+H FK G CSC DYW
Sbjct: 561 ARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 607
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++ T LV +Y C C+ NA +F ++ +RN ++ +I +A +G E A+ ++ +++
Sbjct: 271 IVKTSLVDMYVKCGCIDNALHIFQKMEKRNNLTYSAMISGFALHGEGESALRMFSEMIKE 330
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR-NKWETDVFVGAALIDMYAKCSCVVN 126
GL PD+ + L ACS ++EGRR+ ++++ K E L+D+ + +
Sbjct: 331 GLEPDHVVYVSLLNACSHSGLVKEGRRVFGEMLKEGKVEPTAEHYGCLVDLLGRAGLLEE 390
Query: 127 ARQVFDKI 134
A + I
Sbjct: 391 ALETIQSI 398
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/545 (39%), Positives = 317/545 (58%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF T L+ +YS L++AH++F+ IP+R++ W L Y G + AI+L+
Sbjct: 141 GFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLF 200
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+++E+G+ PD++ L AC + ++ G I + + + + + FV L+++YAKC
Sbjct: 201 KKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKC 260
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ AR VFD + E+D P + ++V +
Sbjct: 261 GKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFL 320
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
S+ A + AL G RH F N+ + AL+DMYAKCG + +F++++EK +V
Sbjct: 321 SSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIV 380
Query: 209 SWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
NA I+G A +GH + +F + K + PD TF+G+L C GL +G FF ++
Sbjct: 381 IMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAI 440
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
Y + +V+HY CMVDL G +G LD+A LI M ++P+ VWGALL+ C+L +L
Sbjct: 441 SCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQL 500
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE L++LI LEP +AGNYV LSNIY+ + W+ A++R +M +G+KK SWIE++
Sbjct: 501 AETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEG 560
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
H FL+ D SHP D+IYAKL+ L M+ G+VP TE VF DVE++EK ++ HSE+
Sbjct: 561 TVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERVLGHHSEK 620
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+AFGLI+T G + + KNL++C DCH +K ISKIT REI VRD NR+H F +G CS
Sbjct: 621 LAVAFGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCS 680
Query: 508 CGDYW 512
C DYW
Sbjct: 681 CNDYW 685
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 160/339 (47%), Gaps = 36/339 (10%)
Query: 24 HNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKAC 83
H + LF N+FL+N LI + N + ++L+ + + GL FTFP LKAC
Sbjct: 62 HYSFLLFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKAC 121
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----- 138
+ S + G +H V++ + DV +L+ +Y+ + +A +VF++I ER
Sbjct: 122 TRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWT 181
Query: 139 ----------------------------PSEATLVTVISASADIAALPQGRELHGFSWRH 170
P +V V+SA + L G +
Sbjct: 182 ALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEM 241
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
+ N V+T LV++YAKCG ++ AR++F+ + EK +V+W+ MI GYA + + ++ F
Sbjct: 242 EMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFF 301
Query: 231 EKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGH 289
+M ++ ++PD + VG LS+C+ G D G S++ + ++ ++D+
Sbjct: 302 LQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGI-SLIDRHEFLTNLFMANALIDMYAK 360
Query: 290 SGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
G + ++ +M+ K D + A ++ +GHVKL+
Sbjct: 361 CGAMARGFEVFKEMKEK-DIVIMNAAISGLAKNGHVKLS 398
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/546 (38%), Positives = 321/546 (58%), Gaps = 35/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G G + + L +YS C + +A ++F+ +P ++ W +I Y+ G +E A+ +
Sbjct: 136 GIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAF 195
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++++ + D L AC AL A + GR +H V++ +E+D+FVG AL DMY+K
Sbjct: 196 KKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKA 255
Query: 122 SCVVNARQVF----------------DKILERD------------------PSEATLVTV 147
+ +A VF D +E + P+E T ++
Sbjct: 256 GDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSL 315
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
I A A+ AAL QG +LH + F+ + V + LVDMY KCGL++ A F+++ +
Sbjct: 316 IKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTE 375
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
++WN++++ + HG A+ +FE+M D V+P+ ITF+ +L+ CS GL +EG +F S
Sbjct: 376 IAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYS 435
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M + Y + P +HY+C++DLLG +GRL EA + I +M +P+ W + L +C++HG +
Sbjct: 436 MDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 495
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
+ +LA EKL++LEP ++G V+LSNIYA WE V +R M D +KK SW++V
Sbjct: 496 MGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVG 555
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
K H F + D SHP IY KL L ++K AGYVP T+SV D+++ K ++ HSE
Sbjct: 556 YKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSE 615
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
R+A+AF LI+ P G +++ KNL++C DCH AIKFISK+T R+I VRD +R+HHF DG C
Sbjct: 616 RIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSC 675
Query: 507 SCGDYW 512
SCGDYW
Sbjct: 676 SCGDYW 681
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 181/372 (48%), Gaps = 41/372 (11%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ P L LV++YS C L +A +LFD +PQRNL W +I + N + AI +
Sbjct: 35 GYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTF 94
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G VP F F A++AC++L +IE G+++H ++ +++FVG+ L DMY+KC
Sbjct: 95 CGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKC 154
Query: 122 SCVVNARQVFDKILERDPSEAT---------------------------------LVTVI 148
+ +A +VF+++ +D T L + +
Sbjct: 155 GAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTL 214
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR-V 207
A + A GR +H + FE ++ V AL DMY+K G ++ A N+F E R V
Sbjct: 215 GACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNV 274
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VS+ +I GY K L +F +++ + ++P+ TF ++ AC+ ++G
Sbjct: 275 VSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQ 334
Query: 267 MVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
+++ ++ DP V + +VD+ G G L++A ++ P W +L++ HG
Sbjct: 335 VMKINFDEDPFVS--SILVDMYGKCGLLEQAIQAFDEIG-DPTEIAWNSLVSVFGQHGLG 391
Query: 326 KLAELALEKLIE 337
K A E++++
Sbjct: 392 KDAIKIFERMVD 403
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+ F P +++ LV +Y C L A Q FD I WN L+ + +G + AI++
Sbjct: 338 INFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKI 397
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ R+++ G+ P+ TF L CS +EEG
Sbjct: 398 FERMVDRGVKPNAITFISLLTGCSHAGLVEEG 429
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/545 (38%), Positives = 308/545 (56%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+H+Y++C + AH LF + + + WN +I Y NG ++ +E++
Sbjct: 201 GFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMF 260
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+LE+ D T AC L G+ I E + AL+DMYAKC
Sbjct: 261 KGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKC 320
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ AR++FD++ RD P++ T+V+V+
Sbjct: 321 GELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVL 380
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A + AL G+ +H + R L V + TALVD YAKCG +K A FE + +
Sbjct: 381 SACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTW 440
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W A+I G A +G S +AL+LF M + ++P +TF+GVL ACS G L +EGR F SM
Sbjct: 441 TWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSM 500
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+DY I P ++HY CMVDLLG +G +DEA I M ++P+ VW ALL++C +H +V++
Sbjct: 501 TQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEI 560
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E AL++++ L+P +GNY++LSN YA W+ A +RK M ++G++K CS IE++
Sbjct: 561 GEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPGCSLIELEG 620
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
F + D+ HP EIY K+ + +K GY+P T DV+ EK + HSE+
Sbjct: 621 TIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADARLDVDEYEKQVSVSHHSEK 680
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGL+ + G + ++KNL++C DCH A K ISK+ REI VRD NR+HHFKDG+CS
Sbjct: 681 LAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVYNREIIVRDRNRFHHFKDGLCS 740
Query: 508 CGDYW 512
C DYW
Sbjct: 741 CNDYW 745
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 163/346 (47%), Gaps = 39/346 (11%)
Query: 34 PQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE-IGLVPDNFTFPFALKACSALSAIEEG 92
P R+ +N+LIR++ G E A+ L+ +L+ + PD T +K+CS + + G
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190
Query: 93 RRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR------------------------ 128
R + + + D FV +LI MYA C VV A
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250
Query: 129 -------QVFDKILE-RDP-SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
++F +LE R P E TL++V +A + G+ + ++ + +
Sbjct: 251 GDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLA 310
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQ 238
TALVDMYAKCG + AR LF+++ + VV+W+AMI+GY +AL +F +M+ EV
Sbjct: 311 TALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVN 370
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
P+ +T V VLSAC+ G + G+ + S +R + +V T +VD G + +A
Sbjct: 371 PNDVTMVSVLSACAVLGALETGK-WVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVK 429
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHD 342
M V+ + W AL+ +G + A ++E +EP D
Sbjct: 430 AFESMPVR-NTWTWTALIKGMASNGRSREALELFSSMLEANIEPTD 474
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 15/221 (6%)
Query: 138 DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
P + T+ + + + + L GR + ++++ F ++ V +L+ MYA CG V A
Sbjct: 168 SPDQHTVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHV 227
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGL 256
LF ++ K V++WNAMI GY +G + +++F+ M + P D +T + V +AC R G
Sbjct: 228 LFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGD 287
Query: 257 FDEGRMFFE-----SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV 311
+ G+ E M+R ++ T +VD+ G LD+A L +M + D
Sbjct: 288 ANLGQWIAEYAEEKGMLRSRNL------ATALVDMYAKCGELDKARRLFDRMHSR-DVVA 340
Query: 312 WGALLNSCKLHGHVKLAELALEKL--IELEPHDAGNYVILS 350
W A+++ + A ++ E+ P+D +LS
Sbjct: 341 WSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLS 381
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/538 (38%), Positives = 311/538 (57%), Gaps = 35/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++T L+ YS C+ A LF R +L WN ++ Y + +EL+ + + G
Sbjct: 461 VSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQG 519
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
D+FT LK C L AI +G+++H I++ ++ D++V + ++DMY KC + A+
Sbjct: 520 ERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 579
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
FD I D P E T+ T+ AS+ +
Sbjct: 580 FAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLT 639
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL QGR++H + + + V T+LVDMYAKCG + A LF+++ + +WNAM+
Sbjct: 640 ALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLV 699
Query: 216 GYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G A HG +AL LF++M+ ++PD +TF+GVLSACS GL E + SM RDY I
Sbjct: 700 GLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIK 759
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY+C+ D LG +G + EA +LI M ++ ++ LL +C++ G + + K
Sbjct: 760 PEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATK 819
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L+ELEP D+ YV+LSN+YA A+ W+ + R +M +KK SWIEVKNK H F+
Sbjct: 820 LLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVV 879
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
D S+P + IY K+K + +K+ GYVP T+ DVE +EK + HSE+LA+AFGL
Sbjct: 880 DDRSNPQTELIYKKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGL 939
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++TP T + + KNL++C DCH A+K+ISK+ +REI +RD NR+H FKDGICSCGDYW
Sbjct: 940 LSTPPSTPIRVIKNLRVCGDCHNAMKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 188/416 (45%), Gaps = 42/416 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G ++ L+++Y + A +F+ + +R+L WN +I A + A+ L
Sbjct: 351 LGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCL 410
Query: 61 YYRLLEIGLVPDNFTFPFALKACSAL-SAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
+ +LL GL PD++T LKA S+L + ++IH I+ D FV ALID Y+
Sbjct: 411 FMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYS 470
Query: 120 KCSC-----VVNARQVFD------------------KILE---------RDPSEATLVTV 147
+ C V+ R FD K LE + TL TV
Sbjct: 471 RNRCMKEAEVLFGRNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATV 530
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ + A+ QG+++H ++ + ++L++ V + ++DMY KCG + A+ F+ +
Sbjct: 531 LKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD 590
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V+W +I+G +G +AL +F +M+ V PD T + A S ++GR +
Sbjct: 591 VAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHAN 650
Query: 267 MVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
++ + DP V T +VD+ G +D+A L ++ + + W A+L HG
Sbjct: 651 ALKLNCTSDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHGEG 707
Query: 326 KLAELALEKLIE---LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
K A L L K +E ++P +LS E +R + D GIK I
Sbjct: 708 KEA-LQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEI 762
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 125/264 (47%), Gaps = 22/264 (8%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G +A LV++Y + LF+ +P R++ LWN++++AY G E AI+L
Sbjct: 181 IGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 240
Query: 61 YYRLLEIGLVPDNFTFPFALK------ACSALSAIEEGR---RIHEDVIRNKWETDVFVG 111
GL P+ T + + + E G + E + RNK + ++
Sbjct: 241 SSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVSEIISRNKILSG-YLH 299
Query: 112 AALIDMYAKCSCVVNARQVFDKILERDPS--EATLVTVISASADIAALPQGRELHGFSWR 169
A KC F ++E D + T + V++ + + +L G+++H + +
Sbjct: 300 AGQYSALLKC---------FMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALK 350
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
+L + V +L++MY K + +AR +F + E+ ++SWN++I G A +A+ L
Sbjct: 351 LGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCL 410
Query: 230 F-EKMKDEVQPDHITFVGVLSACS 252
F + ++ ++PDH T VL A S
Sbjct: 411 FMQLLRCGLKPDHYTMTSVLKAAS 434
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 113/253 (44%), Gaps = 9/253 (3%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWN--GPYEVAIE--LYYRL 64
L L+ +YS C L A ++FD++P+R+L WN ++ AYA + G E E L +R+
Sbjct: 83 LVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRI 142
Query: 65 LEIGLV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
L +V T LK C + H + + D FV AL+++Y K
Sbjct: 143 LRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGK 202
Query: 124 VVNARQVFDKILERDPS--EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
V R +F+++ RD L + A+ H S H E+ +++ +
Sbjct: 203 VKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHT-SGLHPNEITLRLLSR 261
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPD 240
+ ++ G VK N + ++S N +++GY G + L F M + +++ D
Sbjct: 262 ISGDDSEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECD 321
Query: 241 HITFVGVLSACSR 253
+TF+ VL+ R
Sbjct: 322 QVTFILVLATAVR 334
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 78/192 (40%), Gaps = 39/192 (20%)
Query: 92 GRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------------- 138
G+ H ++ + + F+ LI MY+KC + AR+VFDK+ ERD
Sbjct: 65 GKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQ 124
Query: 139 PSEATLVTVISASADIAALPQ-------------------------GRELHGFSWRHRFE 173
SE + V A L Q HG++ + +
Sbjct: 125 SSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLD 184
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
+ V ALV++Y K G VK R LFE++ + VV WN M+ Y G +A+DL
Sbjct: 185 GDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 244
Query: 234 KDE-VQPDHITF 244
+ P+ IT
Sbjct: 245 HTSGLHPNEITL 256
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/537 (38%), Positives = 307/537 (57%), Gaps = 37/537 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYA-WNGPYE-VAIELYYR-LLEIGL 69
LV +Y+ C + A ++FD + + N+ W L+ Y G YE A+ ++ LL+ G+
Sbjct: 303 LVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGV 362
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
P+ FTF LKAC++L + G ++H I+ VG L+ +YAK + +AR+
Sbjct: 363 APNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARK 422
Query: 130 VFDKILERDPSEATLV---------------------------------TVISASADIAA 156
FD + E++ T+V +++S +A I
Sbjct: 423 CFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGT 482
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
+ +G ++H + F ++ V AL+ MY+KCG + A +F + + V++W ++I G
Sbjct: 483 IGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIING 542
Query: 217 YAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
+A HG ++KAL+LF M + V+P+ +T++ VLSACS GL DE F SM ++ I P
Sbjct: 543 FAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVP 602
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
++HY CMVDLLG SG L EA + I M D VW L SC++H + KL E A + +
Sbjct: 603 RMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMI 662
Query: 336 IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG 395
+E EPHD Y++LSN+YA WE VA +RK M + I K SWIEV+N+ H F G
Sbjct: 663 LEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVG 722
Query: 396 DASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLI 455
D HP +IY KL L ++K GYVP T+ V HDVE+++K + HSE+LA+AF LI
Sbjct: 723 DTLHPKAQQIYEKLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALI 782
Query: 456 NTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+TP+ + + KNL++C DCH AIK+IS ++ REI VRD NR+HH KDG CSC DYW
Sbjct: 783 STPNPKPIRVFKNLRVCGDCHTAIKYISMVSGREIVVRDANRFHHMKDGTCSCNDYW 839
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 162/338 (47%), Gaps = 54/338 (15%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRI--PQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
+L L+ LYS + A +F + +R++ ++ +I +A N A+E++ +LL
Sbjct: 88 LLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLL 147
Query: 66 -EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAK-CS 122
+ G+ P+ + F ++AC + G + V++ + ++ V VG LIDM+ K CS
Sbjct: 148 LQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCS 207
Query: 123 C--VVNARQVFDKILERD----------------------------------PSEATLVT 146
+ +AR+VFDK+ E++ P TL
Sbjct: 208 LADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTG 267
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+IS A+I L G+ELH + R L++ V +LVDMYAKCGLV+ AR +F+ +RE
Sbjct: 268 LISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHN 327
Query: 207 VVSWNAMITGYAM--HGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRM 262
V+SW A++ GY G+ +A+ +F M + V P+ TF GVL AC+ FD
Sbjct: 328 VMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFD---- 383
Query: 263 FFESMVRDYHIDPSVQHYTC----MVDLLGHSGRLDEA 296
F V I + C +V + SGR++ A
Sbjct: 384 -FGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESA 420
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + L+ +YS C A Q+F+ + N+ W +I +A +G A+EL
Sbjct: 496 IGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALEL 555
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+Y +LE G+ P++ T+ L ACS + I+E
Sbjct: 556 FYNMLETGVKPNDVTYIAVLSACSHVGLIDEA 587
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/515 (40%), Positives = 315/515 (61%), Gaps = 13/515 (2%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFD-RIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
G G + + + +Y++ L A ++ D + + + WN +I Y G E A EL
Sbjct: 168 GLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAAREL 227
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + + ++ T+ + S +E R +++ E D +A+ID Y +
Sbjct: 228 FEGMPDRSMIS---TWNAMISGFSRCGMVEVAREFFDEMK----ERDEISWSAMIDGYIQ 280
Query: 121 CSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
C + A ++F ++ + P + L +V+SA A++ AL QGR +H ++ R+ +L+ +
Sbjct: 281 EGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVL 340
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ 238
T+LVDMYAKCG + +A +FE++ K V SWNAMI G AMHG + A+DLF KM ++
Sbjct: 341 GTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM--DIY 398
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
P+ ITFVGVL+AC+ GGL +G F SM ++Y ++P ++HY C+VDLLG +G L EA
Sbjct: 399 PNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEK 458
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN 358
++ + +P P VWGALL +C+ HG+V+L E + L+ELEP ++G Y +LSNIYA+A
Sbjct: 459 VVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGR 518
Query: 359 WEGVAKLRKLMIDRGIKKSIACSWIEV-KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK 417
WE V ++RKLM +RGIK + S I++ + + H F+ GD SHP +IY L ++ R++
Sbjct: 519 WEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQ 578
Query: 418 EAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHI 477
GY P V D++ +EK + HSE+LAI FGLINT GT + I KNL++C+DCH
Sbjct: 579 MEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHS 638
Query: 478 AIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
A K IS++ REI VRD RYHHF++G CSC D+W
Sbjct: 639 ATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 673
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 156/306 (50%), Gaps = 15/306 (4%)
Query: 28 QLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALS 87
++FD + + N+FLWN +I+ N AI LYY ++ P+ +T+P LKACS
Sbjct: 93 RVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSG 152
Query: 88 AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLV-- 145
+ EG ++H ++++ D + ++ I MYA +V AR +IL+ E V
Sbjct: 153 VVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEAR----RILDDKGGEVDAVCW 208
Query: 146 -TVISASADIAALPQGREL-HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
+I + REL G R + A++ +++CG+V+VAR F++++
Sbjct: 209 NAMIDGYLRFGEVEAARELFEGMPDRSM----ISTWNAMISGFSRCGMVEVAREFFDEMK 264
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRM 262
E+ +SW+AMI GY G +AL++F +M K++++P VLSAC+ G D+GR
Sbjct: 265 ERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGR- 323
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
+ + + I T +VD+ GR+D A ++ +M K + W A++ +H
Sbjct: 324 WIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNK-EVSSWNAMIGGLAMH 382
Query: 323 GHVKLA 328
G + A
Sbjct: 383 GRAEDA 388
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/552 (39%), Positives = 323/552 (58%), Gaps = 41/552 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQ-RNLFLWNVLIRAYAWNGPYEVAIEL 60
GF + + L+ Y L +A ++F + R+ WN +I AY + A+ L
Sbjct: 168 GFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGL 227
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ GL D FT L A + L + G + H +I+ + + VG+ LID+Y+K
Sbjct: 228 FQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSK 287
Query: 121 CSC-VVNARQVFDKILERD----------------------------------PSEATLV 145
C + + R+VF++I E D P++ + V
Sbjct: 288 CGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFV 347
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELN-VKVKTALVDMYAKCGLVKVARNLFEQLRE 204
VISA +++++ QG+++H + + N + V AL+ MY+KCG ++ AR LF+++ E
Sbjct: 348 CVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAE 407
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMF 263
VS N+MI GYA HG ++L LF+ M + ++ P ITF+ VLSAC+ G +EG +
Sbjct: 408 HNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNY 467
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
F M ++I+P +HY+CM+DLLG +G+L EA +LI +M P W +LL +C+ HG
Sbjct: 468 FNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHG 527
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
+++LA A ++++LEP +A YV+LSN+YA A WE VA +RK M DRG+KK CSWI
Sbjct: 528 NIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWI 587
Query: 384 EVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTE-SVFHD--VENDEKANM 440
EVK + H F++ D+SHP EIY L+ + G+MK AGYVP ++ D EK
Sbjct: 588 EVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIR 647
Query: 441 ICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHH 500
+ HSE+LA+AFGLI+T DG +L+ KNL+IC DCH AIKFIS I REITVRD +R+H
Sbjct: 648 LGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHC 707
Query: 501 FKDGICSCGDYW 512
FK+G CSCGDYW
Sbjct: 708 FKEGQCSCGDYW 719
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 126/318 (39%), Gaps = 56/318 (17%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ + LYS C L A + F I N+F +N +I AYA +A +L+ ++ E
Sbjct: 45 FSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPD 104
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
LV N LI YA C A
Sbjct: 105 LVSYN---------------------------------------TLISAYADCGETAPAL 125
Query: 129 QVFDKILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
+F + E D TL VI+A D L +LH + F+ V V AL+ Y
Sbjct: 126 GLFSGMREMGLDMDXFTLSAVITACCDDVGLIG--QLHSVAVSSGFDSYVSVNNALLTYY 183
Query: 187 AKCGLVKVARNLFEQLREKR-VVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITF 244
K G + A+ +F + R VSWN+MI Y H +KAL LF++M + + D T
Sbjct: 184 GKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTL 243
Query: 245 VGVLSACS-----RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
VL+A + GGL G++ ++ H+ + ++DL G C
Sbjct: 244 ASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVG------SGLIDLYSKCGGGMSDCRK 297
Query: 300 IMQMRVKPDPGVWGALLN 317
+ + +PD +W +++
Sbjct: 298 VFEEITEPDLVLWNTMVS 315
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 97/243 (39%), Gaps = 43/243 (17%)
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL 135
F LK C A + G+ +H I++ + I +Y+KC + AR+ F I
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDI- 69
Query: 136 ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
DP+ V S +A IAA YAK +A
Sbjct: 70 -SDPN------VFSFNAIIAA-----------------------------YAKESRPLIA 93
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRG 254
LF+Q+ E +VS+N +I+ YA G + AL LF M++ + D T V++AC
Sbjct: 94 HQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDD 153
Query: 255 -GLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWG 313
GL + S+ D V ++ G +G LD+A + M D W
Sbjct: 154 VGLIGQ----LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWN 209
Query: 314 ALL 316
+++
Sbjct: 210 SMI 212
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/550 (38%), Positives = 314/550 (57%), Gaps = 39/550 (7%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV-AIE 59
+G ++ L+ LY C + + F + + WN LI A A + P + A+E
Sbjct: 519 LGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVE 578
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
+ ++ G P+ TF L A S+LS E G++IH V++ D + AL+ Y
Sbjct: 579 SFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYG 638
Query: 120 KCSCVVNARQVFDKILERDPSEA----------------------------------TLV 145
KC + +F ++ +R + T
Sbjct: 639 KCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFA 698
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
TV+SA A +A L +G E+HG S R E ++ + +ALVDMYAKCG + A FE + +
Sbjct: 699 TVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPAR 758
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFF 264
+ SWN+MI+GYA HGH TK+LDLF +MK + PDH+TFVGVLSACS GL +EG F
Sbjct: 759 NLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHF 818
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS-CKLHG 323
+SM Y + P ++H++CMVDLLG G L++ D + QM VKP+ +W +L + C+ +G
Sbjct: 819 DSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANG 878
Query: 324 -HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSW 382
+ L A E L+E+EP +A NY++LSN+YA W+ VAK R M +KK CSW
Sbjct: 879 RNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSW 938
Query: 383 IEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMIC 442
+ +K+ H F++GD SHP D IY KLK L G+M+ AGY+P T +D+E + K ++
Sbjct: 939 VTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGKMRLAGYIPETRFALYDLEGESKEELLS 998
Query: 443 CHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFK 502
HSE++A+AF ++ P + I KNL++C DCH A K+IS+I ER+I +RD NR+HHF+
Sbjct: 999 YHSEKIAVAF-VLTRPSKMPIRILKNLRVCGDCHSAFKYISQIVERQIVLRDSNRFHHFE 1057
Query: 503 DGICSCGDYW 512
+G CSCGD+W
Sbjct: 1058 NGKCSCGDFW 1067
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 160/352 (45%), Gaps = 38/352 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+++Y+ C +++A +F + ++ WN +I N + A++ + +
Sbjct: 426 IGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTE 485
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L P NFT AL +C++L I G ++H + ++ + DV V AL+ +Y +C V +
Sbjct: 486 LYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQ 545
Query: 129 QVFDKILER----------------------------------DPSEATLVTVISASADI 154
+ F +L+ DP+ T +T+++A + +
Sbjct: 546 KAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSL 605
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR-VVSWNAM 213
+ G+++H + + ++ AL+ Y KCG + N+F ++ +++ VSWN+M
Sbjct: 606 SLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSM 665
Query: 214 ITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I+GY + KA+D+ M + Q D TF VLSAC+ + G VR
Sbjct: 666 ISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRAC- 724
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
++ + + +VD+ GR+D A M + + W ++++ HGH
Sbjct: 725 LESDIVIGSALVDMYAKCGRIDYASRFFEMMPAR-NLYSWNSMISGYARHGH 775
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/477 (22%), Positives = 210/477 (44%), Gaps = 62/477 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF L L+++Y+ L + ++FD +P RNL W+ LI Y N A EL+
Sbjct: 103 GFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELF 162
Query: 62 YRLLEIGLVPDNFTFPFALKACSALS--AIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
+++ G +P+++ F ++AC ++ G +IH + + ++ DV LI MY
Sbjct: 163 RKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYG 222
Query: 120 KCSCVVN-ARQVFDKILERD-------------------------------------PSE 141
+V+ AR+ FD I R+ P+E
Sbjct: 223 NALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNE 282
Query: 142 ATLVTVISASADIA--ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF 199
T ++ISA+ +A L +L + F ++ V +ALV +AK G + A+N+F
Sbjct: 283 YTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIF 342
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDE 259
+++ + VVS N +I G +A++LF +MKD V+ + +++ +L+A + +
Sbjct: 343 QKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMIILTAFPEFHVLEN 402
Query: 260 GRM----FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
G+ ++R ++ + ++++ G +++AC ++ ++ D W ++
Sbjct: 403 GKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDAC-VVFRLMDNKDSVTWNSM 461
Query: 316 LNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAA-NWEGVAKL-----RKLM 369
+ + A +++ E + + N+ ++S + + A+ W V + KL
Sbjct: 462 ITGLDQNKQFLEAVKTFQEMRRTELYPS-NFTMISALSSCASLGWISVGEQLHCEGLKLG 520
Query: 370 IDRGIKKSIA-------CSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEA 419
+D + S A C +++ KA + + D H + + + L E M EA
Sbjct: 521 LDLDVSVSNALLALYGECGYVKECQKAFSLML-DYDHVSWNSLIGALADSEPSMLEA 576
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 123/270 (45%), Gaps = 32/270 (11%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
LV LY + HN Q ++I L + Y ++ + A EL+ +L + G V D
Sbjct: 56 LVDLYKSSQLHHNPVQHDEKIES--------LAQRYRYSCGSKDAEELHLQLFKNGFVND 107
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDV-IRN--KWETDVFVGAALIDMYAKCSCVVNARQ 129
F + + + + GR++ +++ +RN W + LI Y + A +
Sbjct: 108 LFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSW-------SCLISGYTRNRMPNEACE 160
Query: 130 VFDKILERD--PSEATLVTVISASADIA--ALPQGRELHGFSWRHRFELNVKVKTALVDM 185
+F K++ P+ +VI A + L G ++HG + ++ +V L+ M
Sbjct: 161 LFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISM 220
Query: 186 YAKC-GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEV-----QP 239
Y G+V AR F+ + + +VS N+MI+ Y G + A D+F M+ EV +P
Sbjct: 221 YGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKP 280
Query: 240 DHITFVGVLSA-CSRGGLFDEGRMFFESMV 268
+ TF ++SA CS L + G + E ++
Sbjct: 281 NEYTFGSLISATCS---LANSGLVLLEQLL 307
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/552 (39%), Positives = 323/552 (58%), Gaps = 41/552 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQ-RNLFLWNVLIRAYAWNGPYEVAIEL 60
GF + + L+ Y L +A ++F + R+ WN +I AY + A+ L
Sbjct: 168 GFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGL 227
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ GL D FT L A + L + G + H +I+ + + VG+ LID+Y+K
Sbjct: 228 FQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSK 287
Query: 121 CSC-VVNARQVFDKILERD----------------------------------PSEATLV 145
C + + R+VF++I E D P++ + V
Sbjct: 288 CGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFV 347
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELN-VKVKTALVDMYAKCGLVKVARNLFEQLRE 204
VISA +++++ QG+++H + + N + V AL+ MY+KCG ++ AR LF+++ E
Sbjct: 348 CVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAE 407
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMF 263
VS N+MI GYA HG ++L LF+ M + ++ P ITF+ VLSAC+ G +EG +
Sbjct: 408 HNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNY 467
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
F M ++I+P +HY+CM+DLLG +G+L EA +LI +M P W +LL +C+ HG
Sbjct: 468 FNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHG 527
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
+++LA A ++++LEP +A YV+LSN+YA A WE VA +RK M DRG+KK CSWI
Sbjct: 528 NIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWI 587
Query: 384 EVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTE-SVFHD--VENDEKANM 440
EVK + H F++ D+SHP EIY L+ + G+MK AGYVP ++ D EK
Sbjct: 588 EVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIR 647
Query: 441 ICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHH 500
+ HSE+LA+AFGLI+T DG +L+ KNL+IC DCH AIKFIS I REITVRD +R+H
Sbjct: 648 LGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHC 707
Query: 501 FKDGICSCGDYW 512
FK+G CSCGDYW
Sbjct: 708 FKEGQCSCGDYW 719
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 126/318 (39%), Gaps = 56/318 (17%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ + LYS C L A + F I N+F +N +I AYA +A +L+ ++ E
Sbjct: 45 FSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPD 104
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
LV N LI YA C A
Sbjct: 105 LVSYN---------------------------------------TLISAYADCGETAPAL 125
Query: 129 QVFDKILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
+F + E D TL VI+A D L +LH + F+ V V AL+ Y
Sbjct: 126 GLFSGMREMGLDMDGFTLSAVITACCDDVGLIG--QLHSVAVSSGFDSYVSVNNALLTYY 183
Query: 187 AKCGLVKVARNLFEQLREKR-VVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITF 244
K G + A+ +F + R VSWN+MI Y H +KAL LF++M + + D T
Sbjct: 184 GKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTL 243
Query: 245 VGVLSACS-----RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
VL+A + GGL G++ ++ H+ + ++DL G C
Sbjct: 244 ASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVG------SGLIDLYSKCGGGMSDCRK 297
Query: 300 IMQMRVKPDPGVWGALLN 317
+ + +PD +W +++
Sbjct: 298 VFEEITEPDLVLWNTMVS 315
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 73/193 (37%), Gaps = 37/193 (19%)
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR-------------------- 196
L G+ LH + + + +Y+KCG + AR
Sbjct: 24 LSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAA 83
Query: 197 -----------NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITF 244
LF+Q+ E +VS+N +I+ YA G + AL LF M++ + D T
Sbjct: 84 YAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTL 143
Query: 245 VGVLSACSRG-GLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
V++AC GL + S+ D V ++ G +G LD+A + M
Sbjct: 144 SAVITACCDDVGLIGQ----LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGM 199
Query: 304 RVKPDPGVWGALL 316
D W +++
Sbjct: 200 GGIRDEVSWNSMI 212
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/534 (38%), Positives = 316/534 (59%), Gaps = 34/534 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L++LY+ C A +FD + R++ WN +I Y +G A++L+ R+ G
Sbjct: 98 LINLYTKCGRNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMS 157
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
FT + AC+A AI E +++H ++ +++ FVG A++D+YAKC+ + +A VF+
Sbjct: 158 EFTLSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFE 217
Query: 133 KILER---------------------------------DPSEATLVTVISASADIAALPQ 159
K+ ER + +E TL ++SA A +A +
Sbjct: 218 KMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIE 277
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G +LH + F N V +LVD+YA+CG ++ A LF + K VV WNAMI ++
Sbjct: 278 GIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSR 337
Query: 220 HGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
H HS +A+ LFEKM+ + P+ +T++ VLS CS GL ++GR +F ++ D ++P+V
Sbjct: 338 HAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVL 397
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
HY+CMVD+LG SG+ DEA +L+ +M +P +WG+LL SC+ + +++LA +A E+L +L
Sbjct: 398 HYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQL 457
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDAS 398
EP + GN+V+LSN+YA + NWE V RK + D G KK + SWIE K K H F+ G+
Sbjct: 458 EPDNGGNHVLLSNVYAASGNWENVLMARKYLKDSGAKKEMGRSWIEAKGKVHVFVVGERK 517
Query: 399 HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTP 458
HP +IY KL+ + M++ E HDV ++K ++ HSE+LA++FGLI+ P
Sbjct: 518 HPRITDIYNKLEEIYHEMRKFARRTSIECDLHDVHAEQKEELLKHHSEKLALSFGLISLP 577
Query: 459 DGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++I KNL+IC DCH +K + ITER + VRD NR+HHFKDG CSCGD+W
Sbjct: 578 SNIPIIIHKNLRICGDCHSFMKIAAHITERLVIVRDTNRFHHFKDGSCSCGDFW 631
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 150/336 (44%), Gaps = 40/336 (11%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD------- 132
L+ C+ ++ G+ H I TD LI++Y KC AR VFD
Sbjct: 64 LQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSI 123
Query: 133 --------------------KILER------DPSEATLVTVISASADIAALPQGRELHGF 166
K+ R SE TL + I A A A+ + ++LH
Sbjct: 124 VSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTI 183
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ + + N V TA++D+YAKC ++K A +FE++ E+ +V+W+++ GY +G +A
Sbjct: 184 ALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEA 243
Query: 227 LDLFE-KMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMV 284
L LF ++ V+ T +LSAC+ L EG +++ +H + V +V
Sbjct: 244 LHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVA--ASLV 301
Query: 285 DLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE--PHD 342
D+ G++++A L M K + +W A++ S H H A + EK+ +L P++
Sbjct: 302 DVYARCGQIEKAYALFAYMEHK-NVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNE 360
Query: 343 AGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
+LS +G LM DR ++ ++
Sbjct: 361 VTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNV 396
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 121/258 (46%), Gaps = 29/258 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T ++ +Y+ C+ + +A +F+++P+R L W+ L Y NG +E A+ L+ G
Sbjct: 195 VGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREG 254
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ FT L AC++L+ EG ++H +++ + + FV A+L+D+YA+C + A
Sbjct: 255 VELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAY 314
Query: 129 QVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHR--FEL--------NVKV 178
+F + ++ V+ +A IA+ + H SW FE N
Sbjct: 315 ALFAYMEHKN--------VVIWNAMIASFSR----HAHSWEAMILFEKMQQLGIFPNEVT 362
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVS-----WNAMITGYAMHGHSTKALDLFEKM 233
+++ + + GLV+ R+ F L R V ++ M+ G + +A +L KM
Sbjct: 363 YLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKM 422
Query: 234 KDEVQPDHITFVGVLSAC 251
E P + +L +C
Sbjct: 423 PFE--PTASMWGSLLGSC 438
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 6/188 (3%)
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAA----LPQGRELHGFSWRHRFELNV 176
C+ + ++ + D+ L R V+ IS + A L G+ HG + +
Sbjct: 33 CNKLNHSSSLKDRRLARIDRNLIDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDT 92
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE 236
L+++Y KCG AR +F+ + + +VSWN MI GY G +AL LF +M E
Sbjct: 93 LTCNILINLYTKCGRNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHRE 152
Query: 237 -VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
T + AC+ +E + ++ +D + T ++D+ + +
Sbjct: 153 GTHMSEFTLSSTICACAAKYAINECKQ-LHTIALKLALDSNSFVGTAILDVYAKCNMIKD 211
Query: 296 ACDLIMQM 303
AC + +M
Sbjct: 212 ACWVFEKM 219
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 73/143 (51%), Gaps = 7/143 (4%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFH +A LV +Y+ C + A+ LF + +N+ +WN +I +++ + A+ L+
Sbjct: 289 GFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILF 348
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAK 120
++ ++G+ P+ T+ L CS +E+GR ++ ++ E +V + ++D+ +
Sbjct: 349 EKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGR 408
Query: 121 CSCVVNARQVFDKILERDPSEAT 143
A ++ +K+ P E T
Sbjct: 409 SGKTDEAWELLNKM----PFEPT 427
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/537 (39%), Positives = 303/537 (56%), Gaps = 48/537 (8%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
++ Y+ L A +LFD P R++F W ++ Y NG + A + + E +
Sbjct: 241 MISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPE----KN 296
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDV-IRN--KWETDVFVGAALIDMYAKCSCVVNARQ 129
++ + ++ R + E + RN W T +I Y + + AR+
Sbjct: 297 EVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNT-------MITGYGQIGDIAQARK 349
Query: 130 VFDKILERD---------------------------------PSEATLVTVISASADIAA 156
FD + +RD + AT +S ADIAA
Sbjct: 350 FFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAA 409
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
L G+++HG + + + V AL+ MY KCG + A + FE + EK VVSWN M+ G
Sbjct: 410 LELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAG 469
Query: 217 YAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
YA HG +AL +FE MK V+PD IT VGVLSACS GL D G +F SM +DY + P
Sbjct: 470 YARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIP 529
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+ +HYTCM+DLLG +GRL+EA DLI M +P WGALL + ++HG+ +L E A E +
Sbjct: 530 TSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMV 589
Query: 336 IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG 395
++EP ++G YV+LSN+YA + W K+R M D G++K SW+EV+NK H F G
Sbjct: 590 FKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVG 649
Query: 396 DASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLI 455
D SHP + IYA L+ L+ +M+E GYV T+ V HDVE +EK +M+ HSE+LA+AFG++
Sbjct: 650 DCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGIL 709
Query: 456 NTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
P G + + KNL++C+DCH AIK ISKI R I +RD +R+HHF +G CSCGDYW
Sbjct: 710 TIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 124/259 (47%), Gaps = 57/259 (22%)
Query: 255 GLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGA 314
GL D G +F M +Y + P+ +HYTCM+DLLG RL+E GA
Sbjct: 778 GLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE-----------------GA 820
Query: 315 LLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
LL + ++HG+ +L E A + ++ P ++ G++K+R D G+
Sbjct: 821 LLGASRIHGNTELGEKAAQMFFKMGPQNS-----------------GISKMR----DVGV 859
Query: 375 KKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVEN 434
+K SW EV+NK H F G +L + G++ + + E
Sbjct: 860 QKVPGYSWFEVQNKIHTFSVG--------------LFLSRERENIGFLEELDLKMREREE 905
Query: 435 DEKANMICCHSERLAIAFGLINTPDG-TRLLITKNLKICDDCHIAIKFISKITEREITVR 493
+++ + SE LA A G++ P G ++ K + +C+DC AIK +SKI R IT+R
Sbjct: 906 EKERTLKYL-SENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLITLR 964
Query: 494 DVNRYHHFKDGICSCGDYW 512
D H F + ICSCG+YW
Sbjct: 965 DS---HRFNESICSCGEYW 980
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 141/316 (44%), Gaps = 28/316 (8%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L +A +LFD +P++++ WN L+ YA NG + A E++ DN ++
Sbjct: 127 LGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVF----------DNMPEKNSISW 176
Query: 83 CSALSAIEEGRRIHED--VIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPS 140
L+A RI E + +K + D+ L+ + + + +AR +FDK+ RD
Sbjct: 177 NGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDA- 235
Query: 141 EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
+ T+IS A L Q R L S +V TA+V Y + G++ A+ F+
Sbjct: 236 -ISWNTMISGYAQGGGLSQARRLFDESPTR----DVFTWTAMVSGYVQNGMLDEAKTFFD 290
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEG 260
++ EK VS+NAMI GY A +LFE M + ++ +++ + G +
Sbjct: 291 EMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCR---NISSWNTMITGYGQIGDIAQA 347
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
R FF+ M + + + ++ SG +EA ++ ++ +K D C
Sbjct: 348 RKFFDMMPQRDCVS-----WAAIIAGYAQSGHYEEALNMFVE--IKQDGESLNRATFGCA 400
Query: 321 LHGHVKLAELALEKLI 336
L +A L L K I
Sbjct: 401 LSTCADIAALELGKQI 416
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 144/358 (40%), Gaps = 50/358 (13%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR------- 63
L+ Y+ + A ++FD +P++N WN L+ AY NG E A L+
Sbjct: 146 NSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLI 205
Query: 64 --------------------LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK 103
L + V D ++ + + + + RR+ ++
Sbjct: 206 SWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTR- 264
Query: 104 WETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGREL 163
DVF A++ Y + + A+ FD++ E++ E + +I+ + REL
Sbjct: 265 ---DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKN--EVSYNAMIAGYVQTKKMDIAREL 319
Query: 164 HGFSWRHRFE----LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
FE N+ ++ Y + G + AR F+ + ++ VSW A+I GYA
Sbjct: 320 --------FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQ 371
Query: 220 HGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSV 277
GH +AL++F ++K + + + TF LS C+ + G+ V+ Y V
Sbjct: 372 SGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFV 431
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+ ++ + G +DEA D + K D W +L HG + A E +
Sbjct: 432 GN--ALLAMYFKCGSIDEANDTFEGIEEK-DVVSWNTMLAGYARHGFGRQALTVFESM 486
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 114/276 (41%), Gaps = 29/276 (10%)
Query: 113 ALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
A+I Y + S AR +FD++ ERD ++ ++ L R L
Sbjct: 85 AMISGYLRNSKFNLARNLFDQMPERDLFSWNVM--LTGYVRNCRLGDARRLFDL----MP 138
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
E +V +L+ YA+ G V AR +F+ + EK +SWN ++ Y +G +A LFE
Sbjct: 139 EKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFES 198
Query: 233 MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM-VRDYHIDPSVQHYTCMVDLLGHSG 291
D D I++ ++ R + R F+ M VRD + M+ G
Sbjct: 199 KSDW---DLISWNCLMGGFVRKKKLGDARWLFDKMPVRD------AISWNTMISGYAQGG 249
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSN 351
L +A L + + D W A+++ +G + A+ +++ E N
Sbjct: 250 GLSQARRLFDESPTR-DVFTWTAMVSGYVQNGMLDEAKTFFDEMPE------------KN 296
Query: 352 IYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
+ A G + +K+ I R + +S+ C I N
Sbjct: 297 EVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWN 332
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG+G + L+ +Y C + A+ F+ I ++++ WN ++ YA +G A+ +
Sbjct: 423 MGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTV 482
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ + G+ PD T L ACS ++ G
Sbjct: 483 FESMKTAGVKPDEITMVGVLSACSHTGLLDRG 514
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 95/216 (43%), Gaps = 44/216 (20%)
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD------- 235
+ + + G A ++F + + VS+NAMI+GY + A +LF++M +
Sbjct: 56 ISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWN 115
Query: 236 -------------------EVQP--DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
++ P D +++ +LS ++ G DE R F++M I
Sbjct: 116 VMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSIS 175
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
+ ++ H+GR++EAC L K D W + +C + G V+ +L +
Sbjct: 176 -----WNGLLAAYVHNGRIEEACLLF---ESKSD---WDLISWNCLMGGFVRKKKLGDAR 224
Query: 335 LI--ELEPHDAGNYVILSNIYARAANWEGVAKLRKL 368
+ ++ DA ++ + + YA+ G+++ R+L
Sbjct: 225 WLFDKMPVRDAISWNTMISGYAQGG---GLSQARRL 257
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/541 (39%), Positives = 298/541 (55%), Gaps = 37/541 (6%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
H + T + LYS C + LF + ++ +N +I Y NG E+++ L+ L+
Sbjct: 255 HDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELM 314
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G + T + L I IH +++ + + V AL +Y+K + +
Sbjct: 315 LSGARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIE 371
Query: 126 NARQVFDKILERD---------------------------------PSEATLVTVISASA 152
+AR++FD+ E+ P+ T+ ++SA A
Sbjct: 372 SARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACA 431
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+ AL G+ +H FE ++ V TAL+ MYAKCG + AR LF+ + +K V+WN
Sbjct: 432 QLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNT 491
Query: 213 MITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
MI+GY +HG +AL++F E + + P +TF+ VL ACS GL EG F SM+ Y
Sbjct: 492 MISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRY 551
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
+PSV+HY CMVD+LG +G L A I M ++P VW LL +C++H LA
Sbjct: 552 GFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTV 611
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHA 391
EKL EL+P + G +V+LSNI++ N+ A +R+ R + K+ + IE+ H
Sbjct: 612 SEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHV 671
Query: 392 FLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIA 451
F SGD SHP EIY KL+ LEG+M+EAGY P TE HDVE +E+ M+ HSERLAIA
Sbjct: 672 FTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIA 731
Query: 452 FGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
FGLI T GT + I KNL++C DCH K ISKITER I VRD NR+HHFKDG+CSCGDY
Sbjct: 732 FGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDY 791
Query: 512 W 512
W
Sbjct: 792 W 792
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 159/352 (45%), Gaps = 40/352 (11%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-E 66
+L + +V +Y + +A ++FDR+P+++ LWN +I Y N Y +I+++ L+ E
Sbjct: 155 LLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINE 214
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
D T L A + L + G +IH + + +V I +Y+KC +
Sbjct: 215 SCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKM 274
Query: 127 ARQVFDKILERDP---------------------------------SEATLVTVISASAD 153
+F + + D +TLV+++ S
Sbjct: 275 GSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH 334
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+ + +HG+ + F + V TAL +Y+K ++ AR LF++ EK + SWNAM
Sbjct: 335 LMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAM 391
Query: 214 ITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I+GY +G + A+ LF +M K E P+ +T +LSAC++ G G+ + +VR
Sbjct: 392 ISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK-WVHDLVRSTD 450
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+ S+ T ++ + G + EA L + K + W +++ LHG
Sbjct: 451 FESSIYVSTALIGMYAKCGSIAEARRL-FDLMTKKNEVTWNTMISGYGLHGQ 501
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 129/267 (48%), Gaps = 35/267 (13%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF L TKL S ++ A +F + + ++FL+NVL+R ++ N ++ ++
Sbjct: 47 GFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVF 106
Query: 62 YRLLE-IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
L + L P++ T+ FA+ A S GR IH + + ++++ +G+ ++ MY K
Sbjct: 107 AHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFK 166
Query: 121 CSCVVNARQVFDKILERDP----------------------------------SEATLVT 146
V +AR+VFD++ E+D TL+
Sbjct: 167 FWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLD 226
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ A A++ L G ++H + + + V T + +Y+KCG +K+ LF + R+
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPD 286
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKM 233
+V++NAMI GY +G + +L LF+++
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKEL 313
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 11/250 (4%)
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF---DKILERDPS 140
S L AI R I V R DVF+ L+ ++ ++ VF K + P+
Sbjct: 63 SDLGAIYYARDIFLSVQR----PDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPN 118
Query: 141 EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
+T ISA++ GR +HG + + + + + +V MY K V+ AR +F+
Sbjct: 119 SSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFD 178
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFD 258
++ EK + WN MI+GY + +++ +F + +E + D T + +L A +
Sbjct: 179 RMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELR 238
Query: 259 EGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
G M S+ T + L G++ L + R KPD + A+++
Sbjct: 239 LG-MQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFR-KPDIVAYNAMIHG 296
Query: 319 CKLHGHVKLA 328
+G +L+
Sbjct: 297 YTSNGETELS 306
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/575 (36%), Positives = 329/575 (57%), Gaps = 64/575 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P + +L+ S C + A ++F N++L+ LI + +G Y AI+LY
Sbjct: 76 GHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLY 135
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+L ++PDN+ LKAC + A+ EGR +H ++ + ++ V ++++Y KC
Sbjct: 136 SRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKC 195
Query: 122 SCVVNARQ------------------------------VFDKILERD------------- 138
+ +AR+ VF ++ +D
Sbjct: 196 GELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVR 255
Query: 139 --------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
P+E T+V V+SA + + AL GR +H + + ELN+ V
Sbjct: 256 NEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFV 315
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEV 237
AL++MY++CG + A+ +F++++++ V+++N MI+G +M+G S +A++LF M +
Sbjct: 316 GNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRL 375
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
+P ++TFVGVL+ACS GGL D G F SM RDY ++P ++HY CMVDLLG GRL+EA
Sbjct: 376 RPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAY 435
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAA 357
DLI M++ PD + G LL++CK+H +++L E ++L + D+G YV+LS++YA +
Sbjct: 436 DLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSG 495
Query: 358 NWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK 417
W+ A++R M + G++K CS IEV N+ H FL GD HP + IY KL+ L ++
Sbjct: 496 KWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLR 555
Query: 418 EAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHI 477
GY P E V D+E+ EK + HSERLAI +GLI+T T + + KNL++C DCH
Sbjct: 556 LEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMKNLRVCYDCHS 615
Query: 478 AIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
AIK I+KIT R+I VRD NR+H+F++G CSCGDYW
Sbjct: 616 AIKLIAKITRRKIVVRDRNRFHYFENGACSCGDYW 650
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/551 (39%), Positives = 307/551 (55%), Gaps = 65/551 (11%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L +A +FDR+P+R+ WN +I YA NG A RL E V D FT+ +
Sbjct: 220 LVDARGIFDRMPERDEVSWNTMISGYAQNGELLEA----QRLFEESPVRDVFTWTAMVSG 275
Query: 83 CSALSAIEEGRRIHE-----------------------DVIRNKWET----DVFVGAALI 115
++E RR+ + D R +E +V +I
Sbjct: 276 YVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMI 335
Query: 116 DMYAKCSCVVNARQVFDKILERDP---------------------------------SEA 142
YA+ + AR FD++ +RD + +
Sbjct: 336 TGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRS 395
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T + +S A+IAAL G+++HG + E V AL+ MY KCG + A +FE +
Sbjct: 396 TFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI 455
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR 261
EK VVSWN MI GYA HG +AL LFE MK + PD +T VGVLSACS GL D+G
Sbjct: 456 EEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGT 515
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
+F SM +DY I + +HYTCM+DLLG +GRLD+A +L+ M +PD WGALL + ++
Sbjct: 516 EYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRI 575
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
HG+ +L E A + + E+EP ++G YV+LSN+YA + W V ++R M DRG+KK S
Sbjct: 576 HGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYS 635
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMI 441
W+EV+NK H F GD+ HP D IY L+ L+ +MK+ GYV T+ V HDVE +EK +M+
Sbjct: 636 WVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHML 695
Query: 442 CCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF 501
HSE+LA+AFG++ P G + + KNL++C+DCH A+K ISKI R I +RD +R+HHF
Sbjct: 696 KYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHF 755
Query: 502 KDGICSCGDYW 512
G CSCGDYW
Sbjct: 756 NGGQCSCGDYW 766
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 129/275 (46%), Gaps = 40/275 (14%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L A LFD++P+R++ WN ++ YA NG + A E++ + ++ ++ L A
Sbjct: 127 LRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM----PCKNSISWNGMLAA 182
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEA 142
IE+ RR+ E + WE + ++ Y K + +V+AR +FD++ ERD E
Sbjct: 183 YVQNGRIEDARRLFES--KADWE--LISWNCMMGGYVKRNRLVDARGIFDRMPERD--EV 236
Query: 143 TLVTVISASADIAALPQGRELHG-------FSW----------------RHRF----ELN 175
+ T+IS A L + + L F+W R F E N
Sbjct: 237 SWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKN 296
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD 235
A++ Y +C + AR LFE + + V SWN MITGYA +G +A + F++M
Sbjct: 297 SVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMP- 355
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
Q D I++ +++ ++ G +E F M RD
Sbjct: 356 --QRDSISWAAIIAGYAQSGYGEEALHLFVEMKRD 388
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 140/320 (43%), Gaps = 34/320 (10%)
Query: 20 CDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFA 79
CD +A +LF+ +P+R+ WN +I N + +A +L+ ++ LV N
Sbjct: 65 CD---SALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVM---- 117
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP 139
+ C + R + + + E DV A++ YA+ V A+++FD++ P
Sbjct: 118 ISGCVRYRNLRAARLLFDQMP----ERDVVSWNAMLSGYAQNGYVKEAKEIFDEM----P 169
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK----TALVDMYAKCGLVKVA 195
+ + IS + +AA Q + R FE + ++ Y K + A
Sbjct: 170 CKNS----ISWNGMLAAYVQNGRIEDA--RRLFESKADWELISWNCMMGGYVKRNRLVDA 223
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGG 255
R +F+++ E+ VSWN MI+GYA +G +A LFE + D T+ ++S + G
Sbjct: 224 RGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFE---ESPVRDVFTWTAMVSGYVQNG 280
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
+ DE R F+ M + + ++ R+D+A +L M + + W +
Sbjct: 281 MLDEARRVFDGMPEKNSVS-----WNAIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNTM 334
Query: 316 LNSCKLHGHVKLAELALEKL 335
+ +G + A +++
Sbjct: 335 ITGYAQNGDIAQARNFFDRM 354
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 38/264 (14%)
Query: 41 WNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVI 100
WN+ I + NG + A+ L+ + + ++ + C + R++ E +
Sbjct: 52 WNIAITNHMRNGQCDSALRLFNSMPR----RSSISWNAMISGCLSNDKFYLARQLFEKMP 107
Query: 101 RNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQG 160
D+ +I + + AR +FD++ ERD + ++S A + +
Sbjct: 108 ----TRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDV--VSWNAMLSGYAQNGYVKEA 161
Query: 161 REL-------HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+E+ + SW ++ Y + G ++ AR LFE + ++SWN M
Sbjct: 162 KEIFDEMPCKNSISW-----------NGMLAAYVQNGRIEDARRLFESKADWELISWNCM 210
Query: 214 ITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGG-LFDEGRMFFESMVRDYH 272
+ GY A +F++M + D +++ ++S ++ G L + R+F ES VRD
Sbjct: 211 MGGYVKRNRLVDARGIFDRMPER---DEVSWNTMISGYAQNGELLEAQRLFEESPVRD-- 265
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEA 296
V +T MV +G LDEA
Sbjct: 266 ----VFTWTAMVSGYVQNGMLDEA 285
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ +Y C + +A+ +F+ I ++ + WN +I YA +G + A+ L+ + + G
Sbjct: 431 VGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTG 490
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWET-DVFVGAALIDMYAKCSCVVNA 127
++PD+ T L ACS +++G + ++ T + +ID+ + + +A
Sbjct: 491 ILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDA 550
Query: 128 RQVFDKILERDPSEATLVTVISAS 151
+ + K + +P AT ++ AS
Sbjct: 551 QNLM-KNMPFEPDAATWGALLGAS 573
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 10/164 (6%)
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD 235
VK A+ + + + G A LF + + +SWNAMI+G + A LFEKM
Sbjct: 50 VKWNIAITN-HMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPT 108
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
D +++ ++S C R R+ F+ M + V + M+ +G + E
Sbjct: 109 R---DLVSWNVMISGCVRYRNLRAARLLFDQMP-----ERDVVSWNAMLSGYAQNGYVKE 160
Query: 296 ACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
A ++ +M K + W +L + +G ++ A E + E
Sbjct: 161 AKEIFDEMPCK-NSISWNGMLAAYVQNGRIEDARRLFESKADWE 203
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/537 (39%), Positives = 303/537 (56%), Gaps = 48/537 (8%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
++ Y+ L A +LFD P R++F W ++ Y NG + A + + E +
Sbjct: 241 MISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPE----KN 296
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDV-IRN--KWETDVFVGAALIDMYAKCSCVVNARQ 129
++ + ++ R + E + RN W T +I Y + + AR+
Sbjct: 297 EVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNT-------MITGYGQIGDIAQARK 349
Query: 130 VFDKILERD---------------------------------PSEATLVTVISASADIAA 156
FD + +RD + AT +S ADIAA
Sbjct: 350 FFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAA 409
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
L G+++HG + + + V AL+ MY KCG + A + FE + EK VVSWN M+ G
Sbjct: 410 LELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAG 469
Query: 217 YAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
YA HG +AL +FE MK V+PD IT VGVLSACS GL D G +F SM +DY + P
Sbjct: 470 YARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIP 529
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+ +HYTCM+DLLG +GRL+EA DLI M +P WGALL + ++HG+ +L E A E +
Sbjct: 530 TSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMV 589
Query: 336 IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG 395
++EP ++G YV+LSN+YA + W K+R M D G++K SW+EV+NK H F G
Sbjct: 590 FKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVG 649
Query: 396 DASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLI 455
D SHP + IYA L+ L+ +M+E GYV T+ V HDVE +EK +M+ HSE+LA+AFG++
Sbjct: 650 DCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGIL 709
Query: 456 NTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
P G + + KNL++C+DCH AIK ISKI R I +RD +R+HHF +G CSCGDYW
Sbjct: 710 TIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 141/316 (44%), Gaps = 28/316 (8%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L +A +LFD +P++++ WN L+ YA NG + A E++ DN ++
Sbjct: 127 LGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVF----------DNMPEKNSISW 176
Query: 83 CSALSAIEEGRRIHED--VIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPS 140
L+A RI E + +K + D+ L+ + + + +AR +FDK+ RD
Sbjct: 177 NGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDA- 235
Query: 141 EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
+ T+IS A L Q R L S +V TA+V Y + G++ A+ F+
Sbjct: 236 -ISWNTMISGYAQGGGLSQARRLFDESPTR----DVFTWTAMVSGYVQNGMLDEAKTFFD 290
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEG 260
++ EK VS+NAMI GY A +LFE M + ++ +++ + G +
Sbjct: 291 EMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCR---NISSWNTMITGYGQIGDIAQA 347
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
R FF+ M + + + ++ SG +EA ++ ++ +K D C
Sbjct: 348 RKFFDMMPQRDCVS-----WAAIIAGYAQSGHYEEALNMFVE--IKQDGESLNRATFGCA 400
Query: 321 LHGHVKLAELALEKLI 336
L +A L L K I
Sbjct: 401 LSTCADIAALELGKQI 416
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 144/358 (40%), Gaps = 50/358 (13%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR------- 63
L+ Y+ + A ++FD +P++N WN L+ AY NG E A L+
Sbjct: 146 NSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLI 205
Query: 64 --------------------LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK 103
L + V D ++ + + + + RR+ ++
Sbjct: 206 SWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTR- 264
Query: 104 WETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGREL 163
DVF A++ Y + + A+ FD++ E++ E + +I+ + REL
Sbjct: 265 ---DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKN--EVSYNAMIAGYVQTKKMDIAREL 319
Query: 164 HGFSWRHRFE----LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
FE N+ ++ Y + G + AR F+ + ++ VSW A+I GYA
Sbjct: 320 --------FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQ 371
Query: 220 HGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSV 277
GH +AL++F ++K + + + TF LS C+ + G+ V+ Y V
Sbjct: 372 SGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFV 431
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+ ++ + G +DEA D + K D W +L HG + A E +
Sbjct: 432 GN--ALLAMYFKCGSIDEANDTFEGIEEK-DVVSWNTMLAGYARHGFGRQALTVFESM 486
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 114/276 (41%), Gaps = 29/276 (10%)
Query: 113 ALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
A+I Y + S AR +FD++ ERD ++ ++ L R L
Sbjct: 85 AMISGYLRNSKFNLARNLFDQMPERDLFSWNVM--LTGYVRNCRLGDARRLFDL----MP 138
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
E +V +L+ YA+ G V AR +F+ + EK +SWN ++ Y +G +A LFE
Sbjct: 139 EKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFES 198
Query: 233 MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM-VRDYHIDPSVQHYTCMVDLLGHSG 291
D D I++ ++ R + R F+ M VRD + M+ G
Sbjct: 199 KSDW---DLISWNCLMGGFVRKKKLGDARWLFDKMPVRD------AISWNTMISGYAQGG 249
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSN 351
L +A L + + D W A+++ +G + A+ +++ E N
Sbjct: 250 GLSQARRLFDESPTR-DVFTWTAMVSGYVQNGMLDEAKTFFDEMPE------------KN 296
Query: 352 IYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
+ A G + +K+ I R + +S+ C I N
Sbjct: 297 EVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWN 332
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG+G + L+ +Y C + A+ F+ I ++++ WN ++ YA +G A+ +
Sbjct: 423 MGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTV 482
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ + G+ PD T L ACS ++ G
Sbjct: 483 FESMKTAGVKPDEITMVGVLSACSHTGLLDRG 514
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 93/216 (43%), Gaps = 44/216 (20%)
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE------ 236
+ + + G A ++F + + VS+NAMI+GY + A +LF++M +
Sbjct: 56 ISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWN 115
Query: 237 ----------------------VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
+ D +++ +LS ++ G DE R F++M I
Sbjct: 116 VMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSIS 175
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
+ ++ H+GR++EAC L K D W + +C + G V+ +L +
Sbjct: 176 -----WNGLLAAYVHNGRIEEACLLF---ESKSD---WDLISWNCLMGGFVRKKKLGDAR 224
Query: 335 LI--ELEPHDAGNYVILSNIYARAANWEGVAKLRKL 368
+ ++ DA ++ + + YA+ G+++ R+L
Sbjct: 225 WLFDKMPVRDAISWNTMISGYAQGG---GLSQARRL 257
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/534 (39%), Positives = 316/534 (59%), Gaps = 31/534 (5%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL------- 60
V +T ++ + L A ++FD +PQRN+ W +I YA N +VA +L
Sbjct: 172 VASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDK 231
Query: 61 -----------YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW----- 104
Y R I + F +K +A + + G ++ +V + +W
Sbjct: 232 NEVTWTAMLKGYTRSGRINEAAELFK-AMPVKPVAACNGMIMGFGLNGEVGKARWVFDQM 290
Query: 105 -ETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---PSEATLVTVISASADIAALPQG 160
E D +ALI +Y + + A +F +++R+ P+ ++++++S +A+L G
Sbjct: 291 KEKDDGTWSALIKIYERKGFELEALALFS-LMQREGVRPNFPSIISILSVCGSLASLDHG 349
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMH 220
R++H R F+L++ V + L+ MY KCG + + +F++ K +V WN++I GYA H
Sbjct: 350 RQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQH 409
Query: 221 GHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQH 279
G KAL++F +M PD ITF+GVLSAC G EG FESM Y +D +H
Sbjct: 410 GFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEH 469
Query: 280 YTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
Y CMVDLLG +G+L+EA +LI M V+ D VWGALL++C+ H ++ LAE+A +KL++LE
Sbjct: 470 YACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLE 529
Query: 340 PHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL-SGDAS 398
P AG Y++LSN+YA + W+ VA+LRK M R + KS CSWIEV NK H F G AS
Sbjct: 530 PSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSAS 589
Query: 399 HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTP 458
HP + I KL+ L ++EAGY P V HDV+ ++K + + HSE++A+A+GL+ P
Sbjct: 590 HPEHEMIMKKLEKLGASLREAGYCPDGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVP 649
Query: 459 DGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
G + + KNL++C DCH AIK I+++T REI +RD NR+HHFKDG+CSC D+W
Sbjct: 650 VGKPIRVMKNLRVCGDCHSAIKLIAQVTGREIILRDANRFHHFKDGLCSCRDFW 703
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 156/359 (43%), Gaps = 53/359 (14%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
LV Y + A ++FD++P+RN+ W ++R Y G + A L++R+ E +V
Sbjct: 84 LVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVV-- 141
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
++ L ++E RR+ D+I K DV +I + AR++FD
Sbjct: 142 --SWTVMLGGLIEDGRVDEARRLF-DMIPVK---DVVASTNMIGGLCSEGRLSEAREIFD 195
Query: 133 KILERDPSEATLVTVISASA-----DIA-----ALPQGRE------LHGFSWRHRFELNV 176
++ +R+ T ++IS A D+A +P E L G++ R
Sbjct: 196 EMPQRNVVAWT--SMISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAA 253
Query: 177 KVKTAL-VDMYAKC----------GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
++ A+ V A C G V AR +F+Q++EK +W+A+I Y G +
Sbjct: 254 ELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELE 313
Query: 226 ALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMV 284
AL LF M+ E V+P+ + + +LS C D GR +VR H D + + ++
Sbjct: 314 ALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRS-HFDLDIYVSSVLI 372
Query: 285 DLLGHSGRLDEACDLIMQMRV-----KPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
+ G DL+ RV D +W +++ HG E ALE E+
Sbjct: 373 TMYIKCG------DLVTGKRVFDRFSSKDIVMWNSIIAGYAQHG---FGEKALEVFHEM 422
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 148/330 (44%), Gaps = 32/330 (9%)
Query: 14 VHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDN 73
+ ++ + A +FD + + + WN ++ Y N A +L+ ++ E + N
Sbjct: 23 ISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTISWN 82
Query: 74 FTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDK 133
+K I E R++ + + E +V +++ Y + + A +F +
Sbjct: 83 GLVSGYVKN----GMISEARKVFDKMP----ERNVVSWTSMVRGYVQEGLIDEAELLFWR 134
Query: 134 ILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL----NVKVKTALVDMYAKC 189
+ E++ V+S + + L + + R F++ +V T ++
Sbjct: 135 MPEKN--------VVSWTVMLGGLIEDGRVD--EARRLFDMIPVKDVVASTNMIGGLCSE 184
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLS 249
G + AR +F+++ ++ VV+W +MI+GYAM+ A LFE M D+ + +T+ +L
Sbjct: 185 GRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDK---NEVTWTAMLK 241
Query: 250 ACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
+R G +E F++M + P V M+ G +G + +A + QM+ K D
Sbjct: 242 GYTRSGRINEAAELFKAM----PVKP-VAACNGMIMGFGLNGEVGKARWVFDQMKEK-DD 295
Query: 310 GVWGALLNSCKLHGHVKLAELALEKLIELE 339
G W AL+ + G +L LAL L++ E
Sbjct: 296 GTWSALIKIYERKG-FELEALALFSLMQRE 324
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 168 WRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKAL 227
+R F + + + +A+ G + ARN+F+ L+ K V SWNA++ GY + +A
Sbjct: 8 YRSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQ 67
Query: 228 DLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLL 287
LF+KM + + I++ G++S + G+ E R F+ M + +V +T MV
Sbjct: 68 KLFDKMPER---NTISWNGLVSGYVKNGMISEARKVFDKMP-----ERNVVSWTSMVRGY 119
Query: 288 GHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGHVKLA 328
G +DEA L +M P+ V W +L G V A
Sbjct: 120 VQEGLIDEAELLFWRM---PEKNVVSWTVMLGGLIEDGRVDEA 159
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/509 (40%), Positives = 309/509 (60%), Gaps = 8/509 (1%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI- 67
+A + +YS C +A+++FD +P R++ WN +I +A G ++ AIE++ + + +
Sbjct: 160 VAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQ 219
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G +PD T L A +A + R V N ++ A++ +YA V A
Sbjct: 220 GSMPDAGTMAGILPAMG--NAKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKA 277
Query: 128 RQVFDKILERD---PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVD 184
++F ++E+D P TL TV+ +++A G+ +H R N+ ++ AL+D
Sbjct: 278 VELF-MLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMD 336
Query: 185 MYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHIT 243
MYA CG +K AR +F+ + + V+SW ++I+ Y HGH +A+DLFEKM + ++PD I
Sbjct: 337 MYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIA 396
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
FV VL+ACS GL +G+ +F+SM YHI P +HYTCMVDLLG +G ++EA D I M
Sbjct: 397 FVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTM 456
Query: 304 RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVA 363
++P+ VWGALL +C++H ++ + +A + L L P G YV+LSN+YARA W V
Sbjct: 457 LIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNMYARAGRWADVT 516
Query: 364 KLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVP 423
+R +M+++GIKK S +E+ ++ H F GD HP + IY KL L G+++ GY P
Sbjct: 517 SVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKLDELLGKIRGMGYNP 576
Query: 424 GTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFIS 483
E+ HDVE ++K + + HSE+LAIAF L+NT GT + +T NL+ C DCH+A K IS
Sbjct: 577 EVEATLHDVEEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRVTMNLRTCSDCHLAAKLIS 636
Query: 484 KITEREITVRDVNRYHHFKDGICSCGDYW 512
IT REI ++D NR HH G+CSCGDYW
Sbjct: 637 IITCREIVLKDTNRIHHIVQGVCSCGDYW 665
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 180/376 (47%), Gaps = 50/376 (13%)
Query: 6 HPVLA---TKLVHLYSACDCLHNAHQLF-----DRIPQRNLFLWNVLIRAYAWNGPYEVA 57
HP A KL+ Y+AC L AH + D + +NVLIRA + + A
Sbjct: 46 HPSAAHANVKLIQAYAACSALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDA 105
Query: 58 IELYYRLLEIG--LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALI 115
+ L+ + G PD++T+P ALK+CSA + G +IH V + + + +V+V + I
Sbjct: 106 LVLFASMRPRGPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAI 165
Query: 116 DMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELN 175
MY++C +A +VFD + RD V+S +A IA GF+ F+
Sbjct: 166 SMYSRCGRPEDAYRVFDGMPHRD--------VVSWNAMIA---------GFARVGLFDRA 208
Query: 176 VKV-------KTALVDMYAKCGL-----------VKVARNLFEQLREKRVVSWNAMITGY 217
++V + ++ D G+ ++ R +F+ ++ K ++SWNAM+ Y
Sbjct: 209 IEVFKQFVVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRRVFDNMQFKELISWNAMLAVY 268
Query: 218 AMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
A + KA++LF M KDEV+PD IT VL C F G+ E +++ ++ P+
Sbjct: 269 ANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHE-IIKRKNMCPN 327
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
+ ++D+ G L +A ++ M + D W +++++ HGH + A EK++
Sbjct: 328 LLLENALMDMYASCGCLKDAREIFDLMSAR-DVISWTSIISAYGKHGHGREAVDLFEKML 386
Query: 337 --ELEPHDAGNYVILS 350
LEP +L+
Sbjct: 387 GQGLEPDSIAFVAVLA 402
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+L L+ +Y++C CL +A ++FD + R++ W +I AY +G A++L+ ++L
Sbjct: 329 LLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQ 388
Query: 68 GLVPDNFTFPFALKACSALSAIEEGR 93
GL PD+ F L ACS + +G+
Sbjct: 389 GLEPDSIAFVAVLAACSHAGLLADGK 414
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/543 (37%), Positives = 308/543 (56%), Gaps = 32/543 (5%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + LV +Y+ + N+ ++F+ + N+ W LI Y + + AI+L+
Sbjct: 278 GLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLF 337
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+L + P+ FTF LKAC++L G+++H I+ T VG +LI+MYA+
Sbjct: 338 CNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARS 397
Query: 122 SCVVNARQVFDKILERD-------------------------------PSEATLVTVISA 150
+ AR+ F+ + E++ S T ++S
Sbjct: 398 GTMECARKAFNILFEKNLISYNTAADANAKALDSDESFNHEVEHTGVGASPFTYACLLSG 457
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
+A I + +G ++H + F N+ + AL+ MY+KCG + A +F + + V++W
Sbjct: 458 AACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITW 517
Query: 211 NAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
++I+G+A HG +TKAL+LF +M + V+P+ +T++ VLSACS GL DE F SM
Sbjct: 518 TSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHY 577
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
++ I P ++HY CMVDLLG SG L EA + I M D VW L SC++H + KL E
Sbjct: 578 NHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGE 637
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
A +K++E EPHD Y++LSN+YA W+ VA LRK M + + K SWIEV N+
Sbjct: 638 HAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQV 697
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLA 449
H F GD SHP +IY +L L ++K GY+P T+ V HDVE+++K + HSE++A
Sbjct: 698 HKFHVGDTSHPQARKIYDELDELALKIKNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIA 757
Query: 450 IAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
+A+ LI+TP + + KNL++C DCH AIK+IS +T REI VRD NR+HH KDG CSC
Sbjct: 758 VAYALISTPKPKPIRVFKNLRVCGDCHTAIKYISIVTGREIVVRDANRFHHIKDGKCSCN 817
Query: 510 DYW 512
DYW
Sbjct: 818 DYW 820
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 164/368 (44%), Gaps = 48/368 (13%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
+ +A +FD++ +NL W ++I Y+ G + A++L+ RLL PD FT L A
Sbjct: 198 IQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSA 257
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---- 138
C L G+++H VIR+ +DVFVG L+DMYAK + V N+R++F+ +L +
Sbjct: 258 CVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSW 317
Query: 139 -----------------------------PSEATLVTVISASADIAALPQGRELHGFSWR 169
P+ T +V+ A A + G++LHG + +
Sbjct: 318 TALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIK 377
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
V +L++MYA+ G ++ AR F L EK ++S+N A KALD
Sbjct: 378 LGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANA------KALDS 431
Query: 230 FEKMKDEVQPDHI-----TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMV 284
E EV+ + T+ +LS + G +G +V+ ++ ++
Sbjct: 432 DESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKS-GFGTNLCINNALI 490
Query: 285 DLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH-VKLAELALEKL-IELEPHD 342
+ G + A + M + + W ++++ HG K EL E L I ++P++
Sbjct: 491 SMYSKCGNKEAALQVFNDMGYR-NVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNE 549
Query: 343 AGNYVILS 350
+LS
Sbjct: 550 VTYIAVLS 557
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 166/405 (40%), Gaps = 62/405 (15%)
Query: 21 DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
+ L A D L ++L++A +G E+ L+++L++ GL D+ +
Sbjct: 22 ESLRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLI 81
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD-- 138
S E I ++ +K D+ +A+I +A S A F +L+
Sbjct: 82 TLYSKCGDWENALSIFRNMGHHK--RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRN 139
Query: 139 ---PSEATLVTVISASADIAALPQGRELHGFSWRH-RFELNVKVKTALVDMYAKCGL-VK 193
P+E ++ + ++ G + F + F+ +V V AL+DM+ K GL ++
Sbjct: 140 IIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQ 199
Query: 194 VARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK-MKDEVQPDHITFVGVLSACS 252
AR +F++++ K +V+W MIT Y+ G A+DLF + + E PD T +LSAC
Sbjct: 200 SARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACV 259
Query: 253 RGGLFDEGRMFFESMVR------------------------------DYHIDPSVQHYTC 282
F G+ ++R + + +V +T
Sbjct: 260 ELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTA 319
Query: 283 MVDLLGHSGRLDEACDLIMQM---RVKPDPGVWGALLNSC----------KLHGHVKLAE 329
++ S + EA L M V P+ + ++L +C +LHG +
Sbjct: 320 LISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQT--IK 377
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
L L + + GN +I N+YAR+ E K ++ ++ +
Sbjct: 378 LGLSTI-----NCVGNSLI--NMYARSGTMECARKAFNILFEKNL 415
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/554 (38%), Positives = 319/554 (57%), Gaps = 42/554 (7%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF V+ ++ +YS C + A ++F+ +P RN+ WN +I Y E A+ L
Sbjct: 33 LGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNVISWNAMIAGYTNERNGEEALNL 92
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWE--TDVFVGAALIDMY 118
+ + E G VPD +T+ +LKACS A EG +IH +IR+ + V AL+D+Y
Sbjct: 93 FREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYLAQSAVAGALVDLY 152
Query: 119 AKCSCVVNARQVFDKILERDP-SEATLV-------------------------------- 145
KC + AR+VFD+I E+ S +TL+
Sbjct: 153 VKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLKEAMDLFRELRESRHRMDGFVLS 212
Query: 146 TVISASADIAALPQGRELHGFSWRHRFE-LNVKVKTALVDMYAKCGLVKVARNLFEQLRE 204
++I AD A L QG+++H ++ + + L + V +++DMY KCGL A LF ++ E
Sbjct: 213 SIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANSVLDMYMKCGLTVEADALFREMLE 272
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMF 263
+ VVSW MITGY HG KA++LF +M++ ++PD +T++ VLSACS GL EG+ +
Sbjct: 273 RNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSACSHSGLIKEGKKY 332
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
F + + I P V+HY CMVDLLG GRL EA +LI +M +KP+ G+W LL+ C++HG
Sbjct: 333 FSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIEKMPLKPNVGIWQTLLSVCRMHG 392
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
V++ + E L+ E ++ NYV++SN+YA A W+ K+R+ + +G+KK SW+
Sbjct: 393 DVEMGKQVGEILLRREGNNPANYVMVSNMYAHAGYWKESEKIRETLKRKGLKKEAGRSWV 452
Query: 384 EVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEA-GYVPGTESVFHDVENDEKANMIC 442
E+ + H F +GD HP +EI+ LK +E R+KE GYV HDVE + K +
Sbjct: 453 EMDKEIHIFYNGDGMHPLIEEIHEVLKEMEKRVKEEMGYVHSINFSLHDVEEESKMESLR 512
Query: 443 CHSERLAIAFGLINTP---DGTRLL-ITKNLKICDDCHIAIKFISKITEREITVRDVNRY 498
HSE+LAI L+ G R++ I KNL++C DCH IK +SK+ + VRD NR+
Sbjct: 513 VHSEKLAIGLVLVRRGLKLKGERVIRIFKNLRVCGDCHAFIKGLSKVLKIAFVVRDANRF 572
Query: 499 HHFKDGICSCGDYW 512
H F++G+CSCGDYW
Sbjct: 573 HRFENGLCSCGDYW 586
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 139/317 (43%), Gaps = 70/317 (22%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL---- 135
L CS +++G+++H V + ++ VG ++IDMY+KC V A +VF+ +
Sbjct: 11 LNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPVRNV 70
Query: 136 ------------ERDPSEA-----------------TLVTVISASADIAALPQGRELHGF 166
ER+ EA T + + A + A +G ++H
Sbjct: 71 ISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAA 130
Query: 167 SWRHRFEL--NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST 224
RH F V ALVD+Y KC + AR +F+++ EK V+SW+ +I GYA +
Sbjct: 131 LIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLK 190
Query: 225 KALDLFEKMKDEV-QPDHITFVGVLSACSRGGLFDEGR---------------MFFESMV 268
+A+DLF ++++ + D ++ + L ++G+ M + V
Sbjct: 191 EAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANSV 250
Query: 269 RDYH----------------IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDP 309
D + ++ +V +T M+ G G ++A +L +M+ ++PD
Sbjct: 251 LDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDS 310
Query: 310 GVWGALLNSCKLHGHVK 326
+ A+L++C G +K
Sbjct: 311 VTYLAVLSACSHSGLIK 327
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 87/162 (53%), Gaps = 7/162 (4%)
Query: 140 SEATLVT-VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
SE+ L+ +++ + L QG+++HG + F++ V +++DMY+KCG+V A +
Sbjct: 2 SESRLLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARV 61
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLF 257
F L + V+SWNAMI GY + +AL+LF +M+++ + PD T+ L ACS
Sbjct: 62 FNTLPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAA 121
Query: 258 DEGRMFFESMVRDYHIDPSVQHYT---CMVDLLGHSGRLDEA 296
EG +++R H P + +VDL R+ EA
Sbjct: 122 GEGMQIHAALIR--HGFPYLAQSAVAGALVDLYVKCRRMAEA 161
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/539 (37%), Positives = 311/539 (57%), Gaps = 36/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ LV +Y+ C C+ F+ + +++L W +I YA N + AI L+ ++ G
Sbjct: 386 IGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKG 445
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D L+ACS L + R IH V + D+ + A++++Y + + AR
Sbjct: 446 MDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHIDYAR 504
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+ F+ I +D P +++ +SA+A+++
Sbjct: 505 RAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLS 564
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+L +G+E+HGF R F L + ++LVDMYA CG V+ +R +F ++++ ++ W +MI
Sbjct: 565 SLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMIN 624
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
MHG KA+ LF+KM D+ V PDHITF+ +L ACS GL EG+ FFE M Y ++
Sbjct: 625 ANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLE 684
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P +HY CMVDLL S L+EA + M +KP +W ALL +C +H + +L ELA ++
Sbjct: 685 PWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKE 744
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L++ + ++G Y ++SNI+A W V ++R M G+KK+ CSWIEV NK H F++
Sbjct: 745 LLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMA 804
Query: 395 GDASHPNCDEIYAKLKWLEGRM-KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
D SHP D+IY KL + K+ GY+ T+ VFH+V +EK M+ HSERLA+ +G
Sbjct: 805 RDKSHPQTDDIYLKLAQFTKLLEKKGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYG 864
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+ TP GT + ITKNL+ICDDCH K S++++R + VRD NR+HHF+ G+CSCGD+W
Sbjct: 865 LLVTPKGTCIRITKNLRICDDCHTFFKIASEVSQRPLVVRDANRFHHFERGLCSCGDFW 923
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 152/314 (48%), Gaps = 37/314 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
LATKLV +Y C L +A ++FD + +R +F WN L+ A+ +G Y AIELY + +G
Sbjct: 81 LATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLG 140
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D TFP LKAC AL G IH ++ + VFV ALI MY KC + AR
Sbjct: 141 VAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGAR 200
Query: 129 QVFDKILERDPSEATLVTVISA-------------------------SADIAALPQGRE- 162
+FD I+ + ++ISA + A QG E
Sbjct: 201 VLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVED 260
Query: 163 ---------LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+HG + +V V AL+ MYAKCG ++ A +FE + + VSWN +
Sbjct: 261 PSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTL 320
Query: 214 ITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
++G + + AL+ F M++ Q PD ++ + +++A R G +G+ +R+
Sbjct: 321 LSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRN-G 379
Query: 273 IDPSVQHYTCMVDL 286
+D ++Q +VD+
Sbjct: 380 LDSNMQIGNTLVDM 393
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 208/433 (48%), Gaps = 62/433 (14%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRI--PQRNLFLWNVLIRAYAWNGPYEVAIE 59
G+G + L+ +Y C L A LFD I + + WN +I A+ G A+
Sbjct: 175 GYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALS 234
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
L+ R+ E+G+ + +TF AL+ S ++ G IH V+++ DV+V ALI MYA
Sbjct: 235 LFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYA 294
Query: 120 KCSCVVNARQVFDKILERD---------------------------------PSEATLVT 146
KC + +A +VF+ +L RD P + +++
Sbjct: 295 KCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLN 354
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+I+AS L +G+E+H ++ R+ + N+++ LVDMYAKC VK + FE + EK
Sbjct: 355 LIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKD 414
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
++SW +I GYA + +A++LF K++ + + D + VL ACS GL + R F
Sbjct: 415 LISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACS--GL--KSRNF-- 468
Query: 266 SMVRDYH--------IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
+R+ H D +Q+ +V++ G G +D A +R K D W +++
Sbjct: 469 --IREIHGYVFKRDLADIMLQN--AIVNVYGEVGHIDYARRAFESIRSK-DIVSWTSMIT 523
Query: 318 SCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKL---MIDRG- 373
C +H + + L L ++ + I+S + A AN + K +++ +I +G
Sbjct: 524 CC-VHNGLPVEALELFYSLKQTNIQPDSIAIISALSA-TANLSSLKKGKEIHGFLIRKGF 581
Query: 374 -IKKSIACSWIEV 385
++ IA S +++
Sbjct: 582 FLEGPIASSLVDM 594
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF +A+ LV +Y+ C + N+ ++F + QR+L LW +I A +G AI L+
Sbjct: 580 GFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALF 639
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHE 97
++ + ++PD+ TF L ACS + EG+R E
Sbjct: 640 KKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFE 675
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
ALPQG++LH + L+ + T LV MY KCG ++ A +F+++ E+ + SWNA++
Sbjct: 61 ALPQGQQLHALLLKS--HLSAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMG 118
Query: 216 GYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+ G +A++L++ M+ V D TF VL AC G E R+ E
Sbjct: 119 AFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKAC---GALGESRLGAE 166
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/547 (40%), Positives = 316/547 (57%), Gaps = 39/547 (7%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F ++ +A L+ YS D + A +LF +P+ + +NVLI AWNG E ++EL+
Sbjct: 271 FVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFR 330
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAI--EEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
L D FPFA A +++ E GR+IH I ++V VG +L+DMYAK
Sbjct: 331 ELQFTRF--DRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAK 388
Query: 121 CSCVVNARQVF-------------------DKILERD--------------PSEATLVTV 147
C A ++F K L D AT ++
Sbjct: 389 CDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASI 448
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A A++A+L G++LH R NV +ALVDMYAKCG +K A +F+++ +
Sbjct: 449 LRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNS 508
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSWNA+I+ YA +G AL FE+M +QP+ ++F+ +L ACS GL +EG +F S
Sbjct: 509 VSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNS 568
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M + Y ++P +HY MVD+L SGR DEA L+ +M +PD +W ++LNSC++H + +
Sbjct: 569 MTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQE 628
Query: 327 LAELALEKLIELEP-HDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
LA A ++L ++ DA YV +SNIYA A W+ V K++K + +RGI+K A SW+E+
Sbjct: 629 LAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEI 688
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
K K H F + D SHP EI KL LE +M+E GY P + H+V+ + K + HS
Sbjct: 689 KQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHNVDEEVKVESLKYHS 748
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
ER+AIAF LI+TP G+ +L+ KNL+ C+DCH AIK ISKI REITVRD +R+HHF DG
Sbjct: 749 ERIAIAFALISTPKGSPILVMKNLRACNDCHAAIKVISKIVNREITVRDSSRFHHFTDGS 808
Query: 506 CSCGDYW 512
CSC DYW
Sbjct: 809 CSCKDYW 815
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 172/385 (44%), Gaps = 38/385 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G+ ++ L+ Y L A LF + +++ +N L+ Y+ G AI L
Sbjct: 168 VGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINL 227
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
++++ ++G P FTF L A + IE G+++H V++ + +VFV AL+D Y+K
Sbjct: 228 FFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSK 287
Query: 121 CSCVVNARQVFDKILERDP---------------------------------SEATLVTV 147
+V AR++F ++ E D + T+
Sbjct: 288 HDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATL 347
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+S +A+ L GR++H + V V +LVDMYAKC A +F L +
Sbjct: 348 LSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSS 407
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V W A+I+GY G L LF +M + ++ D T+ +L AC+ G+
Sbjct: 408 VPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSR 467
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
++R + +V + +VD+ G + EA + +M V+ + W AL+++ +G
Sbjct: 468 IIRSGCLS-NVFSGSALVDMYAKCGSIKEALQMFQEMPVR-NSVSWNALISAYAQNGDGG 525
Query: 327 LAELALEKLIE--LEPHDAGNYVIL 349
A + E++I L+P+ IL
Sbjct: 526 HALRSFEQMIHSGLQPNSVSFLSIL 550
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 138/320 (43%), Gaps = 47/320 (14%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L A +LFD +P +N+ N +I Y +G A L+ +++ +V
Sbjct: 58 LGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVT----------- 106
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD--PS 140
W LI YA+ + + A +F + P
Sbjct: 107 ---------------------W-------TMLIGGYAQHNRFLEAFNLFADMCRHGMVPD 138
Query: 141 EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
TL T++S + ++ + ++HG + ++ + V +L+D Y K + +A +LF+
Sbjct: 139 HITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFK 198
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDE 259
+ EK V++NA++TGY+ G + A++LF KM+D +P TF VL+A + +
Sbjct: 199 HMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEF 258
Query: 260 GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC 319
G+ S V + +V ++D R+ EA L +M + D + L+ C
Sbjct: 259 GQQ-VHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMP-EVDGISYNVLITCC 316
Query: 320 KLHGHVKLAELALEKLIELE 339
+G V E +LE EL+
Sbjct: 317 AWNGRV---EESLELFRELQ 333
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/540 (40%), Positives = 309/540 (57%), Gaps = 43/540 (7%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V T ++ Y L A +LFD +P+RN+ W +I Y NG +VA +L+ + E
Sbjct: 172 VARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPE- 230
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
+ ++ L + IEE + D + K V A+I + + V A
Sbjct: 231 ---KNEVSWTAMLMGYTQGGRIEEASELF-DAMPVK---AVVACNAMILGFGQNGEVAKA 283
Query: 128 RQVFDKILERDPSE---------------------------------ATLVTVISASADI 154
RQVFD+I E+D +L++V+S A +
Sbjct: 284 RQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASL 343
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
A+L GR++H + +F+ +V V + L+ MY KCG + AR +F++ K +V WN++I
Sbjct: 344 ASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSII 403
Query: 215 TGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
TGYA HG +AL +F +M + D +TFVGVLSACS G EG FESM Y +
Sbjct: 404 TGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLV 463
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
+P +HY CMVDLLG +G +++A DLI +M V+ D +WGALL +C+ H ++ LAE+A +
Sbjct: 464 EPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAK 523
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
KL++LEP +AG Y++LSNIYA W VA+LR+ M + + KS CSWIEV+ + H F
Sbjct: 524 KLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFT 583
Query: 394 SG-DASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
G HP I L+ L+G ++EAGY P + V HDV+ +EK + HSERLA+AF
Sbjct: 584 GGVSTKHPELSSIMKMLEKLDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAF 643
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
GL+ P+G + + KNL++C DCH AIK I+KIT REI +RD NR+HHFKDG CSC DYW
Sbjct: 644 GLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREIILRDANRFHHFKDGFCSCRDYW 703
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 140/313 (44%), Gaps = 35/313 (11%)
Query: 17 YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTF 76
Y+ + +A ++FD +P + + WN ++ Y N A L+ ++ E V N
Sbjct: 26 YARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTVSWNGLI 85
Query: 77 PFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILE 136
+K + E R+ + + E +V A++ Y + V A +F ++ E
Sbjct: 86 SGYVKN----RMVSEARKAFDTMP----ERNVVSWTAMVRGYVQEGLVSEAETLFWQMPE 137
Query: 137 RDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL----NVKVKTALVDMYAKCGLV 192
++ V+S + + L Q R + R F++ +V +T ++ Y + G +
Sbjct: 138 KN--------VVSWTVMLGGLIQVRRID--EARGLFDIMPVKDVVARTNMISGYCQEGRL 187
Query: 193 KVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACS 252
AR LF+++ + V+SW MI+GY +G A LFE M ++ + +++ +L +
Sbjct: 188 AEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEK---NEVSWTAMLMGYT 244
Query: 253 RGGLFDEGRMFFESMVRDYHIDPSVQHYTC--MVDLLGHSGRLDEACDLIMQMRVKPDPG 310
+GG +E F++M P C M+ G +G + +A + Q+R K D G
Sbjct: 245 QGGRIEEASELFDAM-------PVKAVVACNAMILGFGQNGEVAKARQVFDQIREK-DDG 296
Query: 311 VWGALLNSCKLHG 323
W A++ + G
Sbjct: 297 TWSAMIKVYERKG 309
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 146/334 (43%), Gaps = 30/334 (8%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV-AIELYYRLLEIGL 69
T +V Y + A LF ++P++N+ W V++ G +V I+ L +I
Sbjct: 113 TAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVML-----GGLIQVRRIDEARGLFDIMP 167
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
V D + + E R + +++ R +V +I Y + V AR+
Sbjct: 168 VKDVVARTNMISGYCQEGRLAEARELFDEMPRR----NVISWTTMISGYVQNGQVDVARK 223
Query: 130 VFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFE-LNVKVKTALVDM--- 185
+F+ + E++ +S +A + QG + S F+ + VK A M
Sbjct: 224 LFEVMPEKNE--------VSWTAMLMGYTQGGRIEEAS--ELFDAMPVKAVVACNAMILG 273
Query: 186 YAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITF 244
+ + G V AR +F+Q+REK +W+AMI Y G +AL+LF M+ E VQ + +
Sbjct: 274 FGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSL 333
Query: 245 VGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
+ VLS C+ D GR +V+ D V + ++ + G L +A + +
Sbjct: 334 ISVLSVCASLASLDHGRQVHAELVKS-QFDSDVFVASVLITMYVKCGDLVKARQIFDRFS 392
Query: 305 VKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
K D +W +++ HG L E AL+ E+
Sbjct: 393 PK-DIVMWNSIITGYAQHG---LVEEALQVFHEM 422
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 121/274 (44%), Gaps = 35/274 (12%)
Query: 115 IDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQG---RELHGFSWRHR 171
I YA+ + +AR+VFD++ ++ ++S ++ +A Q RE + +
Sbjct: 23 IARYARIGQIESARRVFDEMPDKG--------IVSWNSMVAGYFQNNRPREAR-YLFDKM 73
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
E N L+ Y K +V AR F+ + E+ VVSW AM+ GY G ++A LF
Sbjct: 74 PERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFW 133
Query: 232 KMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM-VRDYHIDPSVQHYTCMVDLLGHS 290
+M ++ +G L R DE R F+ M V+D V T M+
Sbjct: 134 QMPEKNVVSWTVMLGGLIQVRR---IDEARGLFDIMPVKD------VVARTNMISGYCQE 184
Query: 291 GRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGHVKLAELALEKLIELEPH-DAGNYV 347
GRL EA +L +M P V W +++ +G V +A KL E+ P + ++
Sbjct: 185 GRLAEARELFDEM---PRRNVISWTTMISGYVQNGQVDVA----RKLFEVMPEKNEVSWT 237
Query: 348 ILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
+ Y + E ++L M +K +AC+
Sbjct: 238 AMLMGYTQGGRIEEASELFDAM---PVKAVVACN 268
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/539 (38%), Positives = 318/539 (58%), Gaps = 34/539 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
L+ L++ YS C + A Q+FD + +R+L WN +I Y N A+++++ +
Sbjct: 99 TLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNE 158
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G FT L AC A E +++H ++ + +++VG AL+D+YAKC + +A
Sbjct: 159 GFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDA 218
Query: 128 RQVFDKILER---------------------------------DPSEATLVTVISASADI 154
QVF+ + ++ + ++ TL +VI A +++
Sbjct: 219 VQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNL 278
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
AAL +G+++H + F NV V ++ VDMYAKCG ++ + +F +++EK + WN +I
Sbjct: 279 AALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTII 338
Query: 215 TGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+G+A H + + LFEKM+ D + P+ +TF +LS C GL +EGR FF+ M Y +
Sbjct: 339 SGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGL 398
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P+V HY+CMVD+LG +G L EA +LI + +P +WG+LL SC++ +++LAE+A +
Sbjct: 399 SPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCKNLELAEVAAK 458
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
KL ELEP +AGN+V+LSNIYA WE +AK RKL+ D +KK SWI++K+K H F
Sbjct: 459 KLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFR 518
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
G++SHP EI L L +++ GY P E HDVE +K ++ HSE+LA+ FG
Sbjct: 519 VGESSHPRIREICTMLDNLVIELRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFG 578
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+ P+G+ + I KNL+IC DCH +K S T R I VRD NR+HHF DG CSCG++W
Sbjct: 579 LMCLPEGSTVRIMKNLRICVDCHEFMKAASMATRRFIIVRDANRFHHFSDGHCSCGEFW 637
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 144/307 (46%), Gaps = 38/307 (12%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP 139
L+ C+ A+ E + H +R + + DV + LI+ Y+KC V ARQVFD +LER
Sbjct: 70 LQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSL 129
Query: 140 ---------------------------------SEATLVTVISASADIAALPQGRELHGF 166
SE T+ +V+SA + ++LH
Sbjct: 130 VSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCL 189
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
S + +LN+ V TAL+D+YAKCG++ A +FE +++K V+W++M+ GY + +A
Sbjct: 190 SMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEA 249
Query: 227 LDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
L L+ + + ++ + T V+ ACS EG+ +++R +V + VD
Sbjct: 250 LLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ-MHAVIRKSGFGSNVFVASSAVD 308
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHDA 343
+ G L E+ + +++ K + +W +++ H K + EK+ + + P++
Sbjct: 309 MYAKCGSLRESYIIFSEVQEK-NIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV 367
Query: 344 GNYVILS 350
+LS
Sbjct: 368 TFSSLLS 374
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 89/176 (50%), Gaps = 3/176 (1%)
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
+ + ++ A A+ + + HG + R + +V + L++ Y+KCG V++AR +F+
Sbjct: 64 SDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDG 123
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEG 260
+ E+ +VSWN MI Y + ++ALD+F +M++E + T VLSAC E
Sbjct: 124 MLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALEC 183
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
+ + +D ++ T ++DL G +++A + M+ K W +++
Sbjct: 184 KK-LHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSV-TWSSMV 237
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 9/145 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNG-PYEVAIEL 60
GFG + +A+ V +Y+ C L ++ +F + ++N+ LWN +I +A + P EV I L
Sbjct: 295 GFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMI-L 353
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMY 118
+ ++ + G+ P+ TF L C +EEGRR + ++R + +V + ++D+
Sbjct: 354 FEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFK-LMRTTYGLSPNVVHYSCMVDIL 412
Query: 119 AKCSCVVNARQVFDKILERDPSEAT 143
+ + A ++ I P E T
Sbjct: 413 GRAGLLSEAYELIKSI----PFEPT 433
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/552 (37%), Positives = 310/552 (56%), Gaps = 66/552 (11%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +LFDR+P RN W +I YA NG E A++L L G++P + + ACS
Sbjct: 371 AKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSH 430
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC------------------------ 121
+ A+E GR++H ++ + + +V ALI MY KC
Sbjct: 431 IGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSF 490
Query: 122 -------SCVVNARQVFDKILERD---------------------------------PSE 141
+ + +AR +FD +L RD P+
Sbjct: 491 IAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNS 550
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
L ++S + + G+++H + +H + + V AL+ MY KCG + +F+
Sbjct: 551 PILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCAD-SHKVFDS 609
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEG 260
+ E+ + +WN ITG A HG +A+ ++E M+ V P+ +TFVG+L+ACS GL DEG
Sbjct: 610 MEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEG 669
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
FF+SM RDY + P ++HY CMVDLLG +G + A I M ++PD +W ALL +CK
Sbjct: 670 WQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACK 729
Query: 321 LHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIAC 380
+H + ++ A EKL EP +AGNYV+LSNIY+ W VA+LRK+M RG+ K C
Sbjct: 730 IHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGC 789
Query: 381 SWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANM 440
SW++++NK H+F++GD H +EI L+ L ++ GYVP TE V HD++ ++K +
Sbjct: 790 SWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDIDEEQKESS 849
Query: 441 ICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHH 500
+ HSE+LA+A+GL+ TP G + I KNL+IC DCH IKF+S +T+R+I +RD NR+HH
Sbjct: 850 LLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRDIDIRDGNRFHH 909
Query: 501 FKDGICSCGDYW 512
F++G CSCGD+W
Sbjct: 910 FRNGSCSCGDFW 921
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 133/247 (53%), Gaps = 10/247 (4%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+A LF ++PQRNL W V+I Y + +++ + G PD F L A +
Sbjct: 175 DAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVT 234
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN-ARQVFDKILERDPSEAT 143
L + + V++ +E+DV +G +++++Y + + ++ A + FD ++ER+ E T
Sbjct: 235 GLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERN--EYT 292
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
T+I+A + + ++G R + ++ +TAL+ A+CG + AR LFEQ+
Sbjct: 293 WSTMIAALSHGGRIDAAIAVYG---RDPVK-SIPSQTALLTGLARCGRITEARILFEQIP 348
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMF 263
+ VVSWNAMITGY +G +A +LF++M + I++ G+++ ++ G +E
Sbjct: 349 DPIVVSWNAMITGYMQNGMVDEAKELFDRMPFR---NTISWAGMIAGYAQNGRSEEALDL 405
Query: 264 FESMVRD 270
+++ R+
Sbjct: 406 LQALHRN 412
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 136/348 (39%), Gaps = 84/348 (24%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNF-TFPFALK 81
L A ++FD +P R++ WN +I AY +G E A R+L + N T L
Sbjct: 49 LREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDA-----RILFDAISGGNVRTATILLS 103
Query: 82 ACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSE 141
+ L + + RR+ + + E + A++ Y + + AR++FD + RD +
Sbjct: 104 GYARLGRVLDARRVFDGMP----ERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVT- 158
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
SW ++V Y + A NLF+Q
Sbjct: 159 -------------------------SW-----------NSMVTGYCHSRQMVDAWNLFKQ 182
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEG 260
+ ++ +V+W MI+GY K D+F M E PD F VLSA + GL D G
Sbjct: 183 MPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVT--GLQDLG 240
Query: 261 ----------RMFFESMV-----------RDYH-IDPSVQHYTCMVD-----------LL 287
+ FES V RD +D +++ + MV+ L
Sbjct: 241 VLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAAL 300
Query: 288 GHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
H GR+D A + + VK P ALL G + A + E++
Sbjct: 301 SHGGRIDAAIAVYGRDPVKSIPSQ-TALLTGLARCGRITEARILFEQI 347
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 134/315 (42%), Gaps = 20/315 (6%)
Query: 21 DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
+ L +A +FD + R++ W +I AYA + A+E + +L P++ L
Sbjct: 498 NMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILL 557
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPS 140
C L + + G++IH I++ ++++ V AL+ MY KC C ++ +VFD + ERD
Sbjct: 558 SVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGC-ADSHKVFDSMEERDI- 615
Query: 141 EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
T T I+ A + +++ N L++ + GLV F+
Sbjct: 616 -FTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFK 674
Query: 201 QLREKRVVS-----WNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGG 255
+ ++ + M+ G A M ++PD + + +L AC
Sbjct: 675 SMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMP--IEPDTVIWSALLGACKIHK 732
Query: 256 LFDEGRMFFESMVRDYHIDPS-VQHYTCMVDLLGHSGRLDEACDL--IMQMR-VKPDPGV 311
+ GR E + + +PS +Y + ++ G E +L IM+ R V +PG
Sbjct: 733 NAEIGRRAAEKL---FTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGC 789
Query: 312 -WGALLNSCKLHGHV 325
W + N K+H V
Sbjct: 790 SWMQIRN--KVHSFV 802
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++A L+ +Y C C ++H++FD + +R++F WN I A +G AI++Y + +
Sbjct: 586 IVANALMSMYFKCGCA-DSHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESV 644
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG-AALIDMYAKCSCVVN 126
G++P+ TF L ACS ++EG + + + R+ T + A ++D+ + V
Sbjct: 645 GVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQG 704
Query: 127 ARQ-VFDKILERD 138
A + ++D +E D
Sbjct: 705 AEKFIYDMPIEPD 717
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 112 AALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHR 171
+A I A+ + AR+VFD + RD ++ISA + L R L
Sbjct: 37 SARIRELARLGRLREAREVFDAMPHRDI--IAWNSMISAYCNSGMLEDARIL-------- 86
Query: 172 FEL----NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKAL 227
F+ NV+ T L+ YA+ G V AR +F+ + E+ V+WNAM++ Y +G T A
Sbjct: 87 FDAISGGNVRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMAR 146
Query: 228 DLFEKM 233
LF+ M
Sbjct: 147 RLFDAM 152
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/570 (39%), Positives = 319/570 (55%), Gaps = 66/570 (11%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYA------------------ 49
V++ +L+H+Y+ C L +A LFD IPQ++L WN +I YA
Sbjct: 99 VISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHR 158
Query: 50 ----WN---------GPYEVAIELYYRLLEIGLVPDN-FTFPFALKACSALSAIEEGRRI 95
WN G Y A++L+ + E N FT AL A +A+S++ G+ I
Sbjct: 159 DNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEI 218
Query: 96 HEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----------------- 138
H +IR+ E D V AL+D+Y KC + AR +FD++ ++D
Sbjct: 219 HGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRK 278
Query: 139 ----------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
P+E T V++A AD+AA G+E+HG+ R ++ +AL
Sbjct: 279 KEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASAL 338
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDH 241
V +Y+KCG + AR +F Q+ +VSW ++I GYA +G AL FE + + +PD
Sbjct: 339 VHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDE 398
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
ITFVGVLSAC+ GL D G +F S+ + + + HY C++DLL SGR EA ++I
Sbjct: 399 ITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIID 458
Query: 302 QMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEG 361
M +KPD +W +LL C++HG+++LAE A + L ELEP + Y+ LSNIYA A W
Sbjct: 459 NMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWTE 518
Query: 362 VAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGY 421
K+R M +RGI K SWIE+K + H FL GD SHP +I+ L L +MKE GY
Sbjct: 519 ETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEEGY 578
Query: 422 VPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKF 481
V T V HDVE ++K I HSE+LA+AFG+I+T GT + + KNL+ C DCH A+K+
Sbjct: 579 VADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPIKVFKNLRTCVDCHNAMKY 638
Query: 482 ISKITEREITVRDVNRYHHFKDGICSCGDY 511
ISKI +R+I VRD NR+H F DG CSC DY
Sbjct: 639 ISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 135/308 (43%), Gaps = 48/308 (15%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G V+ T L+ LY C L+ A +FD++ +++ W +I +G + L+
Sbjct: 226 GLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLF 285
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
L+ G+ P+ +TF L AC+ L+A + G+ +H + R ++ F +AL+ +Y+KC
Sbjct: 286 RDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKC 345
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
AR+VF+++ D P E T V V+
Sbjct: 346 GNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVL 405
Query: 149 SASADIAALPQGRE-LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK-R 206
SA + G E H +H ++D+ A+ G K A N+ + + K
Sbjct: 406 SACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPD 465
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKD---EVQPDH-ITFVGVLSACSRGGLFDEGRM 262
W +++ G +HG+ ++L E+ E++P++ T++ + + + GL+ E
Sbjct: 466 KFLWASLLGGCRIHGN----IELAERAAKALFELEPENPATYITLSNIYANAGLWTE--- 518
Query: 263 FFESMVRD 270
E+ VR+
Sbjct: 519 --ETKVRN 524
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 135/352 (38%), Gaps = 105/352 (29%)
Query: 24 HNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKAC 83
H+ H+ F+ I I + + A++ +R+ + P + + AC
Sbjct: 29 HSEHRRFEEI-----------IELFCQQNRLKEAVDYLHRIPQ----PSPRLYSTLIAAC 73
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEAT 143
+E G+R+H + + + + LI MYAKC +V+A+ +FD+I ++D +
Sbjct: 74 LRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDL--CS 131
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
T+IS A++ G ++ AR LF+++
Sbjct: 132 WNTMISGYANV-----------------------------------GRIEQARKLFDEMP 156
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE--------------------------- 236
+ SWNA+I+GY G +ALDLF M++
Sbjct: 157 HRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGK 216
Query: 237 ----------VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDL 286
++ D + + +L + G +E R F+ M D + +T M+
Sbjct: 217 EIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMA-----DKDIVSWTTMIHR 271
Query: 287 LGHSGRLDEACDL---IMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
GR E L +M V+P+ + +LN+C A+LA E++
Sbjct: 272 CFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNAC--------ADLAAEQM 315
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G+ A+ LVH+YS C A ++F+++P+ +L W LI YA NG ++A++
Sbjct: 326 VGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQF 385
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ LL G PD TF L AC+ ++ G
Sbjct: 386 FESLLRSGTKPDEITFVGVLSACTHAGLVDIG 417
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/545 (36%), Positives = 309/545 (56%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF FH + LV +YS C + +A +++ +P ++ +N ++ + NG +E+
Sbjct: 163 GFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVL 222
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ + D TF A C++L + G +H ++ + E D +V +A+I+MY KC
Sbjct: 223 RSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKC 282
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ AR VFD + R+ +E T ++
Sbjct: 283 GKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLL 342
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A A ++A G LHG S + F+ +V V AL++MYAK G ++ A+ +F + + ++
Sbjct: 343 NACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDII 402
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WNAMI G++ HG KAL +F+ M E P+++TF GVLSAC GL EG + +
Sbjct: 403 TWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHL 462
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
++ + + P ++HYTC+V LL +G+L+EA + + VK D W LLN+C +H + L
Sbjct: 463 MKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGL 522
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E ++E++P+D G Y +LSNIYA+ W+GV K+RKLM D+ IKK SWIE+ N
Sbjct: 523 GRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGN 582
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
H F S D HP+ + Y K+K L +K GY P +V HDVE+++K + HSE+
Sbjct: 583 VTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLGYTPDIGAVLHDVEDEQKEYYLSYHSEK 642
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIA+GL+ P +L+ KNL+ICDDCH A++ ISK+T R I VRD NR+HHF+DG CS
Sbjct: 643 LAIAYGLLKLPSEASILVIKNLRICDDCHSAVRLISKVTNRVIVVRDANRFHHFRDGRCS 702
Query: 508 CGDYW 512
C DYW
Sbjct: 703 CLDYW 707
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 183/411 (44%), Gaps = 51/411 (12%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
L++ Y+ + + AH LFDR+P+RN+ W+ L+ Y NG I L ++ G V
Sbjct: 70 NSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNV 129
Query: 71 -PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
P+ + A+ +C +EEGR+ H +++ + +V AL+ MY+KCS V +A
Sbjct: 130 SPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMG 189
Query: 130 VFDKILERDP---------------------------------SEATLVTVISASADIAA 156
V++++ D + T V S A +
Sbjct: 190 VWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKD 249
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
L G +HG E + V +A+++MY KCG +AR +F+ L+ + VV W A++
Sbjct: 250 LRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMAS 309
Query: 217 YAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
+G +AL+LF KM+ E V+ + T+ +L+AC+ G S++ +
Sbjct: 310 CFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNG-----SLLHGHSEKS 364
Query: 276 SVQHY----TCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
+H+ ++++ SG ++ A + M + D W A++ HG K A L
Sbjct: 365 GFKHHVMVGNALINMYAKSGDIEAAKKVFSDM-MHRDIITWNAMICGFSHHGLGKKALLV 423
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANW----EGVAKLRKLMIDRGIKKSI 378
+ ++ E H NYV + + + + EG L LM G++ +
Sbjct: 424 FQDMLAAEEHP--NYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGL 472
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 140 SEATLVTVISASADIAALPQGRELHG--FSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
S L+ ++ SAD L G+ +H E ++ +L++ YAK V +A N
Sbjct: 28 SPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHN 87
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGG 255
LF+++ E+ VVSW+A++TGY ++G S K + L + M E V P+ +S+C G
Sbjct: 88 LFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRG 147
Query: 256 LFDEGR 261
+EGR
Sbjct: 148 RVEEGR 153
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/512 (37%), Positives = 311/512 (60%), Gaps = 34/512 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G G + +++ LV++Y++C + A +FD + +R+ WNVLI AY N E + ++
Sbjct: 209 GMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVF 268
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R++ G+ + ++ + C ++ GR + ++ + F
Sbjct: 269 GRMMSEGVGLNYASWNAVIGGC-----MQNGRTEKALEVLSRMQNSGF------------ 311
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
P++ T+ +V+ A ++ +L G+++HG+ +RH F ++ TA
Sbjct: 312 ----------------KPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTA 355
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPD 240
LV MYAKCG ++++R +F + ++ VSWN MI +MHG+ +AL LF +M D V+P+
Sbjct: 356 LVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPN 415
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
+TF GVLS CS L DEG + F+SM RD+ ++P H++CMVD+L +GRL+EA + I
Sbjct: 416 SVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFI 475
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
+M ++P G WGALL C+++ +V+L +A +L E+E + GNYV+LSNI A W
Sbjct: 476 KKMPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWS 535
Query: 361 GVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAG 420
++ RKLM DRG+ K+ CSWI+V+N+ H F+ GD S+ DEIY L ++ +M+ AG
Sbjct: 536 EASETRKLMRDRGVTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAG 595
Query: 421 YVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIK 480
Y+P T+ V DV+ +EK ++C HSE+LA+AFG++N + + + KNL+IC DCH AIK
Sbjct: 596 YLPNTDFVLQDVDQEEKEEVLCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIK 655
Query: 481 FISKITEREITVRDVNRYHHFKDGICSCGDYW 512
F++KI +I VRD R+HHF+DG+CSC D+W
Sbjct: 656 FMAKIVGVKIIVRDSLRFHHFRDGLCSCQDFW 687
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 178/406 (43%), Gaps = 82/406 (20%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P LA K + +YS L A LFD+IPQ +L W +LI A +G AI+ Y
Sbjct: 11 PHLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRH 70
Query: 67 IGLV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
V PD KAC++L + +R+HED IR + +DV +G ALIDMY KC C
Sbjct: 71 KNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSE 130
Query: 126 NARQVFDKILERD---------------------------------PSEATLVTVISASA 152
AR VF+ + RD P+ T+ +++ A
Sbjct: 131 GARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACT 190
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
D+ L GRE+HGF R+ NV V +ALV+MYA C ++ A+ +F+ + + VSWN
Sbjct: 191 DLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNV 250
Query: 213 MITGYAM-----------------------------------HGHSTKALDLFEKMKDE- 236
+IT Y + +G + KAL++ +M++
Sbjct: 251 LITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSG 310
Query: 237 VQPDHITFVGVLSACS-----RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
+P+ IT VL AC+ RGG G +F +D + T +V + G
Sbjct: 311 FKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQD------LTTTTALVFMYAKCG 364
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
L E + M K D W ++ + +HG+ + A L ++++
Sbjct: 365 DL-ELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVD 409
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/561 (37%), Positives = 315/561 (56%), Gaps = 66/561 (11%)
Query: 17 YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTF 76
Y+ L A LF ++P +N W +I + N A+EL L G VP + +F
Sbjct: 499 YTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSF 558
Query: 77 PFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN---------- 126
AL AC+ + +E GR IH I+ + + +V LI MYAKC V +
Sbjct: 559 TSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRV 618
Query: 127 ---------------------ARQVFDKILERD--------------------------- 138
AR VF+K+ +RD
Sbjct: 619 KDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDM 678
Query: 139 ------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLV 192
P++ T+ +++SA ++ A+ G + H ++ F+ + V +L+ MY KCG
Sbjct: 679 LARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGY- 737
Query: 193 KVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSAC 251
+ +FE++ E +++WNA++ G A +G +A+ +FE+M+ E + PD ++F+GVL AC
Sbjct: 738 EDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCAC 797
Query: 252 SRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV 311
S GL DEG F SM + Y I P V HYTCMVDLLG +G L EA LI M VKPD +
Sbjct: 798 SHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVI 857
Query: 312 WGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMID 371
W ALL +C++H +V+L + E+L ++ + YV+LSN++A W+ VA++RKLM D
Sbjct: 858 WEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKD 917
Query: 372 RGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHD 431
+G+ K SWI+VKNK H F++GD +H +EIY+ LK G + GY+P T V HD
Sbjct: 918 QGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVLHD 977
Query: 432 VENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREIT 491
VE ++K N + HSE+LA+ FG+++TP+G+ + I KNL+IC DCH +KF+SK+T R+I
Sbjct: 978 VEEEQKQNELLYHSEKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTLRKII 1037
Query: 492 VRDVNRYHHFKDGICSCGDYW 512
+RD NR+HHF+DG CSCGDYW
Sbjct: 1038 IRDGNRFHHFRDGSCSCGDYW 1058
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 174/396 (43%), Gaps = 45/396 (11%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
+V Y C + A +LFD++P+RN W V+I Y Y A +++ ++ PD
Sbjct: 301 VVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPD 360
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
F L A + L +E + I+ +E DV VG+A+++ Y + + A F+
Sbjct: 361 QSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFE 420
Query: 133 KILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLV 192
+ ER+ E + T+I+A A L +L + E V KTA++ YA+ G +
Sbjct: 421 TMPERN--EYSWTTMIAAFAQCGRLDDAIQL----YERVPEQTVATKTAMMTAYAQVGRI 474
Query: 193 KVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM------------------- 233
+ AR +F+++ VV+WNA+I GY +G +A DLF+KM
Sbjct: 475 QKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNE 534
Query: 234 -------------KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY-HIDPSVQH 279
+ P +F LSAC+ G + GR+ ++ + V +
Sbjct: 535 ESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMN 594
Query: 280 YTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
++ + G +++ + +RVK D W +L++ + + A + EK +
Sbjct: 595 --GLISMYAKCGNVEDGSHVFRTIRVK-DTVSWNSLISGLSENYMLDDARVVFEK---MP 648
Query: 340 PHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIK 375
D ++ + + Y +A + E L M+ RGIK
Sbjct: 649 KRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIK 684
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 167/399 (41%), Gaps = 76/399 (19%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ V+ + +++ Y+ L A F+ +P+RN + W +I A+A G + AI+LY
Sbjct: 391 GYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLY 450
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+ E + T + A + + I++ R I ++++ +V A+I Y +
Sbjct: 451 ERVPEQTVA----TKTAMMTAYAQVGRIQKARLIFDEIL----NPNVVAWNAIIAGYTQN 502
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ A+ +F K+ ++ PS+++ + +
Sbjct: 503 GMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSAL 562
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCG------------------ 190
SA A+I + GR +H + + + N V L+ MYAKCG
Sbjct: 563 SACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTV 622
Query: 191 -------------LVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF-EKMKDE 236
++ AR +FE++ ++ VVSW A+I+ Y GH ALDLF + +
Sbjct: 623 SWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARG 682
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
++P+ +T +LSAC G G F +++ D + ++ + G D
Sbjct: 683 IKPNQLTVTSLLSACGNLGAIKLGEQ-FHALIFKLGFDTFLFVGNSLITMYFKCGYEDGF 741
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
C + + + D W A+L C +G K A E++
Sbjct: 742 C--VFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQM 778
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 164/368 (44%), Gaps = 59/368 (16%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
+++ YS + A LFD +N+ W +L+ YA G E A E++ + E +V
Sbjct: 208 MINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSW 267
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
N ++ ++ R++ +++ E +V +++ Y C + AR++FD
Sbjct: 268 NAMISGYVQN----GDLKNARKLFDEMP----EKNVASWNSVVTGYCHCYRMSEARELFD 319
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
++ ER+ P ++ V V+SA + L
Sbjct: 320 QMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLEL 379
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
L + + +E +V V +A+++ Y + G + +A + FE + E+ SW MI +A
Sbjct: 380 IGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQ 439
Query: 220 HGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQH 279
G A+ L+E++ ++ T +++A ++ G + R+ F+ + ++P+V
Sbjct: 440 CGRLDDAIQLYERVPEQTVA---TKTAMMTAYAQVGRIQKARLIFDEI-----LNPNVVA 491
Query: 280 YTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL--ALEKLIE 337
+ ++ +G L EA DL +M VK + W A+ + G V+ E ALE LIE
Sbjct: 492 WNAIIAGYTQNGMLKEAKDLFQKMPVK-NSASWAAM-----IAGFVQNEESREALELLIE 545
Query: 338 LEPHDAGN 345
L H +G+
Sbjct: 546 L--HRSGS 551
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 138/355 (38%), Gaps = 97/355 (27%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNF-TFPFALK 81
+ A ++F+ + QR++ WN +I Y+ NG + A RLL V N T+ L
Sbjct: 187 VEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEA-----RLLFDAFVGKNIRTWTILLT 241
Query: 82 ACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSE 141
+ IEE R + E + E +V A+I Y + + NAR++FD++ E+
Sbjct: 242 GYAKEGRIEEAREVFESMT----ERNVVSWNAMISGYVQNGDLKNARKLFDEMPEK---- 293
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
NV ++V Y C + AR LF+Q
Sbjct: 294 ---------------------------------NVASWNSVVTGYCHCYRMSEARELFDQ 320
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSAC--------- 251
+ E+ VSW MI+GY +A D+F KM + +PD FV VLSA
Sbjct: 321 MPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELI 380
Query: 252 --------------------------SRGGLFDEGRMFFESMVRDYHIDPSVQHY--TCM 283
+R G D FFE+M P Y T M
Sbjct: 381 GSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETM-------PERNEYSWTTM 433
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGVW--GALLNSCKLHGHVKLAELALEKLI 336
+ GRLD+A L ++ P+ V A++ + G ++ A L ++++
Sbjct: 434 IAAFAQCGRLDDAIQLYERV---PEQTVATKTAMMTAYAQVGRIQKARLIFDEIL 485
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 110/234 (47%), Gaps = 31/234 (13%)
Query: 96 HEDVIRNKW--ETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASAD 153
H+ +NK +T +F I + V AR+VF+++++RD V+S ++
Sbjct: 157 HKSGAKNKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRD--------VVSWNSM 208
Query: 154 IAALPQGRELHGFSWRHRFEL----NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
I Q ++ R F+ N++ T L+ YAK G ++ AR +FE + E+ VVS
Sbjct: 209 INGYSQNGKVD--EARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVS 266
Query: 210 WNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
WNAMI+GY +G A LF++M ++ + V C R E R F+ M
Sbjct: 267 WNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYR---MSEARELFDQM-- 321
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLD--EACDLIMQM---RVKPDPGVWGALLNS 318
P + MV + G+ D EA D+ ++M +PD ++ +L++
Sbjct: 322 -----PERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSA 370
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/556 (39%), Positives = 314/556 (56%), Gaps = 48/556 (8%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQ--RNLFLWNVLIRAYAWNGPYEVAIE 59
GF ++A ++ +Y C + A ++FD + + R++ WN+++ AY N + AI+
Sbjct: 277 GFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQ 336
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
LY R+ L D T+ L ACS+ + GR +H+ ++ ++ E +V VG AL+ MYA
Sbjct: 337 LYQRM---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYA 393
Query: 120 KCSCVVNARQVFDKILERD----------------------------------------P 139
KC AR VFDK+ +R P
Sbjct: 394 KCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKP 453
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF 199
VT+++A AD++AL QG+ + + + V TA+V++Y KCG ++ R +F
Sbjct: 454 DALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIF 513
Query: 200 EQLREKRVVS-WNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLF 257
+ + + V WNAMI YA G S +AL LF +M+ E V+PD +FV +L ACS GL
Sbjct: 514 DGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLE 573
Query: 258 DEGRMFFESMVRDY-HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
D+G+ +F SM +Y ++ ++QH+ C+ DLLG GRL EA + + ++ VKPD W +LL
Sbjct: 574 DQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLL 633
Query: 317 NSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKK 376
+C+ H +K A+ KL+ LEP A YV LSNIYA W VAK+RK M ++G+KK
Sbjct: 634 AACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKK 693
Query: 377 SIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDE 436
S IE+ H F +GD +HP EI +L L +MKE GYVP T+ V H V+ E
Sbjct: 694 ERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQE 753
Query: 437 KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVN 496
K ++ HSERLAIA GLI+TP GT L +TKNL++C DCH A K ISKI R+I VRD
Sbjct: 754 KERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPT 813
Query: 497 RYHHFKDGICSCGDYW 512
R+H FKDG CSC DYW
Sbjct: 814 RFHLFKDGKCSCQDYW 829
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 178/388 (45%), Gaps = 78/388 (20%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+L +V +Y+ CD +A FD + QRNL+ W L+ A+A +G + + R+ +
Sbjct: 80 ILGNHIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQD 139
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ PD TF AL +C ++ +G RIH+ V+ ++ E D V AL++MY KC + +A
Sbjct: 140 GVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHA 199
Query: 128 RQVFDK----------------------------------ILERDPSEATLVTVISASAD 153
++VF K +L +++ +VT++SA +
Sbjct: 200 KRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSS 259
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE--KRVVSWN 211
A + GR +H FE + V A++ MY +CG V+ AR +F+ + E + VVSWN
Sbjct: 260 PALVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWN 319
Query: 212 AMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD- 270
M++ Y + A+ L+++M +++ D +T+V +LSACS GR+ + +V D
Sbjct: 320 IMLSAYVHNDRGKDAIQLYQRM--QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDE 377
Query: 271 -------------------YHIDP----------SVQHYTCMVDLLGHSGRLDEACDLIM 301
H + S+ +T ++ + EAC L
Sbjct: 378 LEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQ 437
Query: 302 QM----------RVKPDPGVWGALLNSC 319
QM RVKPD + +LN+C
Sbjct: 438 QMLELEKNGSSQRVKPDALAFVTILNAC 465
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 156/355 (43%), Gaps = 73/355 (20%)
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIR-NKWETDVFVGAALIDMYAKCSCVVNARQV 130
+N T+ L+ C+ A+ EGR+IH ++ N ++ +G ++ MYA C +A+
Sbjct: 42 ENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAA 101
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
FD + +R+ P T +T + + D +L
Sbjct: 102 FDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESL 161
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL-REKRVVSWNAMITG 216
G +H R E++ KV AL++MY KCG + A+ +F ++ R + V+SW+ M
Sbjct: 162 RDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGA 221
Query: 217 YAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMF--------FESM 267
+A+HG+ +AL F M ++ V +LSACS L +GR+ FES
Sbjct: 222 HALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESE 281
Query: 268 V-----------RDYHIDPS-------------VQHYTCMVDLLGHSGRLDEACDLIMQM 303
+ R ++ + V + M+ H+ R +A L +M
Sbjct: 282 LLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRM 341
Query: 304 RVKPDPGVWGALLNSCKLHGHVKLAELALEKLI--ELEPH-DAGNYVILSNIYAR 355
+++ D + +LL++C V L + ++++ ELE + GN ++ ++YA+
Sbjct: 342 QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALV--SMYAK 394
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/539 (39%), Positives = 309/539 (57%), Gaps = 36/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ + YS DC++ +LF+ +P+ + +NV+I AYAW G + +I+L+ L
Sbjct: 278 VGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTT 337
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
NF FP L ++ ++ GR++H V+ + + D V +L+DMYAKC A
Sbjct: 338 FDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEAD 397
Query: 129 QVFDKILERDP---------------------------------SEATLVTVISASADIA 155
++F ++ R +AT V+ ASA++A
Sbjct: 398 RIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLA 457
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
++ G++LH R F +NV AL+DMYA C +K A FE++ E+ VV+WNA+++
Sbjct: 458 SILLGKQLHSCVIRSGF-MNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLS 516
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
YA +G L FE+M QPD ++F+ +L+ACS L +EG +F M Y++
Sbjct: 517 AYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLA 576
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P +HYT MVD L SGR DEA L+ QM +PD VW ++LNSC++H + LA A +
Sbjct: 577 PKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQ 636
Query: 335 LIELEP-HDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
L ++ DA YV +SNI+A A W+ V K++K M DRG++K A SW+E+K+K H F
Sbjct: 637 LFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVRKLPAYSWVEIKHKVHVFS 696
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
+ D HP EI K++ L +M++ GY P +V+ + K + + HSERLAIAF
Sbjct: 697 ANDDKHPQQLEILRKIEMLAEQMEKEGYDPDISCAHQNVDKESKIDSLKYHSERLAIAFA 756
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LINTP+G+ +L+ KNL+ C DCH AIK ISKI REITVRD NR+HHF+DG CSCGDYW
Sbjct: 757 LINTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSNRFHHFRDGSCSCGDYW 815
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 158/358 (44%), Gaps = 37/358 (10%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ Y L +A +LF + + +NV+I YA NG E AIEL+ + +G P
Sbjct: 181 LLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPS 240
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+FTF + A L G++IH V++ + +VFVG A +D Y+K CV R++F+
Sbjct: 241 DFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFN 300
Query: 133 KILERDPSEATLV---------------------------------TVISASADIAALPQ 159
++ E D ++ T++S +A L
Sbjct: 301 EMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQM 360
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
GR+LH + + +V +LVDMYAKCG + A +F +L + V W AMI+
Sbjct: 361 GRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQ 420
Query: 220 HGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
G L LF +M+ V D TF VL A + G+ ++R ++ V
Sbjct: 421 RGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGFMN--VY 478
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
++D+ + + +A +M + + W ALL++ +G K + E++I
Sbjct: 479 SGCALLDMYANCASIKDAIKTFEEMSER-NVVTWNALLSAYAQNGDGKGTLKSFEEMI 535
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 109/252 (43%), Gaps = 44/252 (17%)
Query: 4 GFHPVLA--TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF P+ + ++ S L A QL D++P RN F +++I Y +G VA
Sbjct: 38 GFDPITSRFNFMIKDLSERGQLCQARQLLDQMPNRNSFSIDIIISGYVKSGNLTVA---- 93
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
RRI +D E V +I Y+K
Sbjct: 94 -------------------------------RRIFDDTD----ERTVVAWTTMIGAYSKS 118
Query: 122 SCVVNARQVFDKILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
+ +A ++F ++ P T +T+++ D+ + + H + LN +V
Sbjct: 119 NRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVC 178
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQ 238
L+D Y K G + AR LF ++ VS+N MITGYA +G + +A++LF +M++ +
Sbjct: 179 NTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFK 238
Query: 239 PDHITFVGVLSA 250
P TF V+SA
Sbjct: 239 PSDFTFAAVISA 250
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 138 DPSEATLVTVISASADIAALPQGREL-HGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
DP + +I ++ L Q R+L R+ F +++ ++ Y K G + VAR
Sbjct: 40 DPITSRFNFMIKDLSERGQLCQARQLLDQMPNRNSFSIDI-----IISGYVKSGNLTVAR 94
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGG 255
+F+ E+ VV+W MI Y+ A LF +M + QPD++T++ +L+ C+
Sbjct: 95 RIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCND-- 152
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTC--MVDLLGHSGRLDEACDLIMQMRVKPDPGVWG 313
+ + +++ + + + H C ++D +G LD A L ++M W
Sbjct: 153 -LEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEM------CGWD 205
Query: 314 ALLNSCKLHGHVK--LAELALEKLIELE 339
++ + + G+ L E A+E +E++
Sbjct: 206 SVSFNVMITGYANNGLNEEAIELFVEMQ 233
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/539 (37%), Positives = 311/539 (57%), Gaps = 36/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ +Y+ C C+ + F+ + +++L W +I YA N + AI L+ ++ G
Sbjct: 386 IGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKG 445
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D L+ACS L + R IH V + D+ + A++++Y + AR
Sbjct: 446 MDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHRDYAR 504
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+ F+ I +D P +++ +SA+A+++
Sbjct: 505 RAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLS 564
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+L +G+E+HGF R F L + ++LVDMYA CG V+ +R +F ++++ ++ W +MI
Sbjct: 565 SLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMIN 624
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
MHG +A+ LF+KM DE V PDHITF+ +L ACS GL EG+ FFE M Y ++
Sbjct: 625 ANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLE 684
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P +HY CMVDLL S L+EA + M +KP VW ALL +C +H + +L ELA ++
Sbjct: 685 PWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKE 744
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L++ + ++G Y ++SNI+A W V ++R M G+KK+ CSWIEV NK H F++
Sbjct: 745 LLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMA 804
Query: 395 GDASHPNCDEIYAKLKWLEGRM-KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
D SHP D+IY KL + K+ GY+ T+ VFH+V +EK M+ HSERLA+ +G
Sbjct: 805 RDKSHPQTDDIYLKLAQFTKLLGKKGGYIAQTKFVFHNVSEEEKTQMLYRHSERLALGYG 864
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+ TP GT + ITKNL+ICDDCH K S++++R + VRD NR+HHF+ G+CSCGD+W
Sbjct: 865 LLVTPKGTSIRITKNLRICDDCHTFFKIASEVSQRALVVRDANRFHHFERGLCSCGDFW 923
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 153/315 (48%), Gaps = 39/315 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
LATKL+H+Y C L +A ++FD + +R +F WN ++ A+ +G Y AIELY + +G
Sbjct: 81 LATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLG 140
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D TFP LKAC AL G IH ++ + VFV ALI MY KC + AR
Sbjct: 141 VAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGAR 200
Query: 129 QVFDKILERDPSEATLVTVISASAD--------------------------IAALPQGRE 162
+FD I+ + ++ISA +AAL QG E
Sbjct: 201 VLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAAL-QGVE 259
Query: 163 ----------LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+HG + + +V V AL+ MYAKCG ++ A +F + + VSWN
Sbjct: 260 DPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNT 319
Query: 213 MITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
+++G + AL+ F M++ Q PD ++ + +++A R G G+ +R+
Sbjct: 320 LLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRN- 378
Query: 272 HIDPSVQHYTCMVDL 286
+D ++Q ++D+
Sbjct: 379 GLDSNMQIGNTLIDM 393
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 203/433 (46%), Gaps = 62/433 (14%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRI--PQRNLFLWNVLIRAYAWNGPYEVAIE 59
GFG + L+ +Y C L A LFD I + + WN +I A+ G A+
Sbjct: 175 GFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALS 234
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
L+ R+ E+G+ + +TF AL+ S ++ G IH +++ DV+V ALI MYA
Sbjct: 235 LFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYA 294
Query: 120 KCSCVVNARQVFDKILERD---------------------------------PSEATLVT 146
KC + +A +VF +L RD P + +++
Sbjct: 295 KCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLN 354
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+I+AS L G+E+H ++ R+ + N+++ L+DMYAKC VK FE + EK
Sbjct: 355 LIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKD 414
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
++SW +I GYA + +A++LF K++ + + D + VL ACS GL + R F
Sbjct: 415 LISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACS--GL--KSRNF-- 468
Query: 266 SMVRDYH--------IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
+R+ H D +Q+ +V++ G G D A +R K D W +++
Sbjct: 469 --IREIHGYVFKRDLADIMLQN--AIVNVYGEVGHRDYARRAFESIRSK-DIVSWTSMIT 523
Query: 318 SCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKL---MIDRG- 373
C +H + + L L ++ + I+S + A AN + K +++ +I +G
Sbjct: 524 CC-VHNGLPVEALELFYSLKQTNIQPDSIAIISALSA-TANLSSLKKGKEIHGFLIRKGF 581
Query: 374 -IKKSIACSWIEV 385
++ IA S +++
Sbjct: 582 FLEGPIASSLVDM 594
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 116/274 (42%), Gaps = 40/274 (14%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
L C A+ A+ +G+++H ++++ F+ L+ MY KC + +A +VFD++ ER
Sbjct: 53 LDLCVAVKALPQGQQLHARLLKS--HLSAFLATKLLHMYEKCGSLKDAVKVFDEMTERTI 110
Query: 139 --------------------------------PSEATLVTVISASADIAALPQGRELHGF 166
T +V+ A + G E+HG
Sbjct: 111 FTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGV 170
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE--QLREKRVVSWNAMITGYAMHGHST 224
+ + F V V AL+ MY KCG + AR LF+ + ++ VSWN++I+ + G
Sbjct: 171 AVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCL 230
Query: 225 KALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
+AL LF +M++ V + TFV L G + ++ H V +
Sbjct: 231 EALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHF-ADVYVANAL 289
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
+ + GR+++A + M + D W LL+
Sbjct: 290 IAMYAKCGRMEDAERVFASMLCR-DYVSWNTLLS 322
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 4/151 (2%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF +A+ LV +Y+ C + N+ ++F + QR+L LW +I A +G AI L+
Sbjct: 580 GFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALF 639
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMYA 119
++ + ++PD+ TF L ACS + EG+R E +++ ++ + + A ++D+ +
Sbjct: 640 KKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFE-IMKYGYQLEPWPEHYACMVDLLS 698
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISA 150
+ + + A Q F + + PS ++ A
Sbjct: 699 RSNSLEEAYQ-FVRSMPIKPSSEVWCALLGA 728
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/556 (38%), Positives = 321/556 (57%), Gaps = 56/556 (10%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFL----WNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+V Y+ A +LF + + N+ L W+ +I YA G + A++ + +++ G
Sbjct: 331 MVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYG 390
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN------------KWETDVFVGAALID 116
P++ T L AC++L A+ +G H ++ D+ V ALID
Sbjct: 391 SEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALID 450
Query: 117 MYAKCSCVVNARQVFDKILERD-------------------------------------P 139
MY+KC AR +F+ I R+ P
Sbjct: 451 MYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAP 510
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRH-RFELNVK-VKTALVDMYAKCGLVKVARN 197
+ T+ ++ A A +++L G+++H + RH +E +V V L+DMY+KCG V ARN
Sbjct: 511 NAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARN 570
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGL 256
+F+ + ++ VSW +M++GY MHG +ALD+F+KM K PD I+F+ +L ACS G+
Sbjct: 571 VFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGM 630
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
D+G +F+ M DY + S QHY C++DLL SGRLD+A I +M ++P +W ALL
Sbjct: 631 VDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALL 690
Query: 317 NSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKK 376
++C++H +V+LAE AL KL+ ++ + G+Y ++SNIYA A W+ VA++R+LM GIKK
Sbjct: 691 SACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKK 750
Query: 377 SIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDE 436
CSW++ K +F GD SHP EIY+ L+ L GR+K GYVP T HDV+++E
Sbjct: 751 RPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEE 810
Query: 437 KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVN 496
K N++ HSE+LA+A+GL+ T G + ITKNL++C DCH A +ISKI + EI VRD +
Sbjct: 811 KNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISKIVDHEIIVRDSS 870
Query: 497 RYHHFKDGICSCGDYW 512
R+HHFK+G CSCG YW
Sbjct: 871 RFHHFKNGSCSCGGYW 886
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 149/303 (49%), Gaps = 43/303 (14%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T +V Y AC +A + +R+ WN+L+RA+ G + AI + R+L G
Sbjct: 85 LGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAG 144
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
PD+FT P+ALKAC L + G H + N +E++VFV AL+ MY++ + +A
Sbjct: 145 TKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDAS 204
Query: 129 QVFDKILER-------------------DPSEA-----------------------TLVT 146
VFD+I + +P A ++V
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVN 264
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ A A + ALPQ +E+H ++ R+ + V AL+D YAKCG +K A N+F + K
Sbjct: 265 ILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKD 324
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFE 265
VVSWNAM+TGY G A +LF+ M+ E P D IT+ V++ ++ G E F+
Sbjct: 325 VVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQ 384
Query: 266 SMV 268
M+
Sbjct: 385 QMI 387
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 157/359 (43%), Gaps = 58/359 (16%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ Y+ C + +A +F+ + +++ WN ++ Y +G + A EL+
Sbjct: 300 LIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELF----------- 348
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+++ + DV +A+I YA+ A F
Sbjct: 349 ------------------------KNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQ 384
Query: 133 KIL--ERDPSEATLVTVISASADIAALPQGRELHGFSWRH------------RFELNVKV 178
+++ +P+ T+++++SA A + AL QG E H +S + ++ V
Sbjct: 385 QMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVV 444
Query: 179 KTALVDMYAKCGLVKVARNLFEQL--REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE 236
AL+DMY+KC K AR +F + RE+ VV+W MI GYA +G S AL LF +M +
Sbjct: 445 HNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISK 504
Query: 237 ---VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHY-TCMVDLLGHSGR 292
V P+ T +L AC+ G+ + R + + SV C++D+ G
Sbjct: 505 PYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGD 564
Query: 293 LDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHDAGNYVIL 349
+D A ++ M K + W ++++ +HG K A +K+ + P D V+L
Sbjct: 565 VDTARNVFDSMP-KRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLL 622
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 51/273 (18%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQR---NLFLWNVLIRAYAWNGPYEVAI 58
GF + + LV +YS L +A +FD I ++ ++ WN ++ A+ A+
Sbjct: 179 GFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTAL 238
Query: 59 ELYYRLLEI------GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGA 112
+L+ + I D + L AC++L A+ + + IH IRN D FV
Sbjct: 239 DLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCN 298
Query: 113 ALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
ALID YAKC + +A VF+ + +D SW
Sbjct: 299 ALIDTYAKCGSMKDAVNVFNVMEFKDV--------------------------VSW---- 328
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR----VVSWNAMITGYAMHGHSTKALD 228
A+V Y + G A LF+ +R++ V++W+A+I GYA G+ +ALD
Sbjct: 329 -------NAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALD 381
Query: 229 LFEKM-KDEVQPDHITFVGVLSACSRGGLFDEG 260
F++M +P+ +T + +LSAC+ G +G
Sbjct: 382 TFQQMILYGSEPNSVTIISLLSACASLGALSQG 414
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 76/144 (52%), Gaps = 4/144 (2%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A L+ +YS C + A +FD +P+RN W ++ Y +G + A++++ ++ + G
Sbjct: 551 VANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAG 610
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMYAKCSCVVN 126
VPD+ +F L ACS +++G + D++R+ + A +ID+ A+ +
Sbjct: 611 FVPDDISFLVLLYACSHSGMVDQGLD-YFDIMRSDYGVIASAQHYACVIDLLARSGRLDK 669
Query: 127 ARQVFDKILERDPSEATLVTVISA 150
A + + + +PS A V ++SA
Sbjct: 670 AWKTIQE-MPMEPSAAIWVALLSA 692
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 19/180 (10%)
Query: 120 KCSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
+C V RQ+ KI+ A+L++V + LP H +
Sbjct: 40 ECRSVNTVRQIHQKIIAYGLLSYPASLLSV-----SLPPLPS----------HSYVSPKS 84
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDE 236
+ T +V Y CG A ++ E++ V WN ++ + G +A+ + +M +
Sbjct: 85 LGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAG 144
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+PDH T L AC + G F ++ + +V +V + SG L++A
Sbjct: 145 TKPDHFTLPYALKACGELPSYRSGSA-FHGLICCNGFESNVFVCNALVAMYSRSGSLEDA 203
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/551 (39%), Positives = 307/551 (55%), Gaps = 65/551 (11%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L +A +FDR+P+R+ WN +I YA NG A RL E V D FT+ +
Sbjct: 139 LVDARGIFDRMPERDEVSWNTMISGYAQNGELLEA----QRLFEESPVRDVFTWTAMVSG 194
Query: 83 CSALSAIEEGRRIHE-----------------------DVIRNKWET----DVFVGAALI 115
++E RR+ + D R +E +V +I
Sbjct: 195 YVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMI 254
Query: 116 DMYAKCSCVVNARQVFDKILERDP---------------------------------SEA 142
YA+ + AR FD++ +RD + +
Sbjct: 255 TGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRS 314
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T + +S A+IAAL G+++HG + E V AL+ MY KCG + A +FE +
Sbjct: 315 TFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI 374
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR 261
EK VVSWN MI GYA HG +AL LFE MK + PD +T VGVLSACS GL D+G
Sbjct: 375 EEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGT 434
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
+F SM +DY I + +HYTCM+DLLG +GRLD+A +L+ M +PD WGALL + ++
Sbjct: 435 EYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRI 494
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
HG+ +L E A + + E+EP ++G YV+LSN+YA + W V ++R M DRG+KK S
Sbjct: 495 HGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYS 554
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMI 441
W+EV+NK H F GD+ HP D IY L+ L+ +MK+ GYV T+ V HDVE +EK +M+
Sbjct: 555 WVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHML 614
Query: 442 CCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF 501
HSE+LA+AFG++ P G + + KNL++C+DCH A+K ISKI R I +RD +R+HHF
Sbjct: 615 KYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHF 674
Query: 502 KDGICSCGDYW 512
G CSCGDYW
Sbjct: 675 NGGQCSCGDYW 685
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 129/275 (46%), Gaps = 40/275 (14%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L A LFD++P+R++ WN ++ YA NG + A E++ + ++ ++ L A
Sbjct: 46 LRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM----PCKNSISWNGMLAA 101
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEA 142
IE+ RR+ E + WE + ++ Y K + +V+AR +FD++ ERD E
Sbjct: 102 YVQNGRIEDARRLFES--KADWE--LISWNCMMGGYVKRNRLVDARGIFDRMPERD--EV 155
Query: 143 TLVTVISASADIAALPQGRELHG-------FSW----------------RHRF----ELN 175
+ T+IS A L + + L F+W R F E N
Sbjct: 156 SWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKN 215
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD 235
A++ Y +C + AR LFE + + V SWN MITGYA +G +A + F++M
Sbjct: 216 SVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMP- 274
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
Q D I++ +++ ++ G +E F M RD
Sbjct: 275 --QRDSISWAAIIAGYAQSGYGEEALHLFVEMKRD 307
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 80/149 (53%), Gaps = 13/149 (8%)
Query: 192 VKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSAC 251
++ AR LF+Q+ E+ VVSWNAM++GYA +G+ +A ++F++M + + I++ G+L+A
Sbjct: 46 LRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK---NSISWNGMLAAY 102
Query: 252 SRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV 311
+ G ++ R FES D + + CM+ RL +A + +M + D
Sbjct: 103 VQNGRIEDARRLFESKA-----DWELISWNCMMGGYVKRNRLVDARGIFDRMPER-DEVS 156
Query: 312 WGALLNSCKLHGHVKLAELALEKLIELEP 340
W +++ +G + L ++L E P
Sbjct: 157 WNTMISGYAQNGEL----LEAQRLFEESP 181
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ +Y C + +A+ +F+ I ++ + WN +I YA +G + A+ L+ + + G
Sbjct: 350 VGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTG 409
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWET-DVFVGAALIDMYAKCSCVVNA 127
++PD+ T L ACS +++G + ++ T + +ID+ + + +A
Sbjct: 410 ILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDA 469
Query: 128 RQVFDKILERDPSEATLVTVISAS 151
+ + K + +P AT ++ AS
Sbjct: 470 QNLM-KNMPFEPDAATWGALLGAS 492
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 35/153 (22%)
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
E +V A++ YA+ G VK A+ +F+++ K +SWN M+ Y +G A LFE
Sbjct: 58 ERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFES 117
Query: 233 MKD----------------------------EVQPDHITFVGVLSACSRGG-LFDEGRMF 263
D + D +++ ++S ++ G L + R+F
Sbjct: 118 KADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLF 177
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
ES VRD V +T MV +G LDEA
Sbjct: 178 EESPVRD------VFTWTAMVSGYVQNGMLDEA 204
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/547 (38%), Positives = 316/547 (57%), Gaps = 42/547 (7%)
Query: 4 GFHPV--LATKLVHLYSACDCLHNAHQLFDRIP-QRNLFLWNVLIRAYAWNGPYEVAIEL 60
GFH + T L+ Y+ L A +F + +N+ W +I NG +A L
Sbjct: 288 GFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAAL 347
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+ E G+ P++ T+ L +S +IH VI+ +E VG AL+ Y+K
Sbjct: 348 FSRMREDGVAPNDLTYSTIL----TVSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSK 403
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
A +F I ++D P+E T+ +
Sbjct: 404 LCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSA 463
Query: 148 ISASADIAA-LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
I A A AA + GR+ H S +HR + V +ALV MYA+ G ++ A+ +FE+ ++
Sbjct: 464 IDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRD 523
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
++SWN+M++GYA HG+S KALD+F +M+ E + D +TF+ V+ C+ GL +EG+ +F+
Sbjct: 524 LLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFD 583
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
MVRDY I P++ HY CMVDL +G+LDE LI M P +W ALL +C++H +V
Sbjct: 584 LMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNV 643
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+L +LA EKL+ LEP D+ YV+LSNIY+ A W+ ++RKLM + ++K CSWI++
Sbjct: 644 ELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQI 703
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
KNK H F++ D SHP ++IYAKL+ + ++K+ GY P T V HDV D+K M+ HS
Sbjct: 704 KNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGYCPDTSFVPHDVAEDQKEAMLAMHS 763
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
ERLA+AFGLI TP L I KNL++ D H +K +S+I +REI +RD R+HHFK G+
Sbjct: 764 ERLALAFGLIATPPAAPLHIFKNLRVSGDGHTVMKMVSEIEDREIVMRDCCRFHHFKSGV 823
Query: 506 CSCGDYW 512
CSCGD+W
Sbjct: 824 CSCGDFW 830
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 129/276 (46%), Gaps = 35/276 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T LV +Y + + ++F+ + +RN+ W L+ Y G + L++R+ G
Sbjct: 93 VGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEG 152
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P+ FTF L ++ ++ G+ +H I+ + VFV +L++MYAKC V AR
Sbjct: 153 VWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEAR 212
Query: 129 QVFDKILERDP---------------------------------SEATLVTVISASADIA 155
VF ++ RD +E+T TVI+ A++
Sbjct: 213 VVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLK 272
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-EKRVVSWNAMI 214
L R+LH +H F V TAL+D Y K G + A ++F + + VVSW AMI
Sbjct: 273 HLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMI 332
Query: 215 TGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLS 249
G +G A LF +M+ D V P+ +T+ +L+
Sbjct: 333 DGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILT 368
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 144/309 (46%), Gaps = 40/309 (12%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWE-TDVFVGAALIDMYAKCSCVVNARQVFDKILERD 138
+K C ++ G+++H +R + D+ VG +L+DMY V++ R+VF+ +L+R+
Sbjct: 62 IKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRN 121
Query: 139 ---------------------------------PSEATLVTVISASADIAALPQGRELHG 165
P+ T +V+S A + G+ +H
Sbjct: 122 VVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHA 181
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
S + V V +L++MYAKCGLV+ AR +F ++ + +VSWN ++ G ++G +
Sbjct: 182 QSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLE 241
Query: 226 ALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCM 283
AL LF + + T+ V++ C+ R S+++ +H +V T +
Sbjct: 242 ALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVM--TAL 299
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPH 341
+D +G+LD+A D+ + M + W A+++ C +G + LA ++ E + P+
Sbjct: 300 MDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPN 359
Query: 342 DAGNYVILS 350
D IL+
Sbjct: 360 DLTYSTILT 368
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 107/239 (44%), Gaps = 12/239 (5%)
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRHRFEL-NVKVKTALVDMYAKCGLVKVARNLFE 200
L+ +I + G++LH R + +++V T+LVDMY V R +FE
Sbjct: 56 GALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFE 115
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDE 259
+ ++ VV+W +++TGY G + LF +M+ E V P+ TF VLS + G+ D
Sbjct: 116 GMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDL 175
Query: 260 GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC 319
G+ ++ + +V ++++ G ++EA + +M + D W L+
Sbjct: 176 GQHVHAQSIK-FGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETR-DMVSWNTLMAGL 233
Query: 320 KLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
L+G LE L + ++ + Y+ N A L+ L + R + S+
Sbjct: 234 VLNGR------DLEALQLFHDSRSSITMLTESTYSTVINL--CANLKHLGLARQLHSSV 284
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/519 (39%), Positives = 307/519 (59%), Gaps = 29/519 (5%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAI-ELYYRLLEIGLVPDNFTFPFALK 81
+ +A ++F +P+ N+ W LI Y +G E + L+ +L + P++ T+ LK
Sbjct: 300 MEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLK 359
Query: 82 ACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDK-----ILE 136
AC+ LS + GR+IH V++ VG AL+ MYA+ C+ AR+ FD+ IL
Sbjct: 360 ACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILS 419
Query: 137 RDP----------------------SEATLVTVISASADIAALPQGRELHGFSWRHRFEL 174
P S T +++SA+A + L +G++LH S + F
Sbjct: 420 MSPDVETERNNASCSSKIEGMDDGVSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFRS 479
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM- 233
+ + +LV MYA+CG ++ A F+++++ V+SW ++I+G A HG++ +AL +F M
Sbjct: 480 DQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMI 539
Query: 234 KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
V+P+ +T++ VLSACS GL EG+ F SM +D+ + P ++HY C+VDLL SG +
Sbjct: 540 LAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLV 599
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIY 353
+EA I +M K D VW LL++C+ +G+ ++ E+A +I LEP D YV+LSN+Y
Sbjct: 600 EEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLY 659
Query: 354 ARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLE 413
A A W+ VA++R LM D+ + K SW++V N H F +GD SHP +IYAKL L
Sbjct: 660 ADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDTSHPLAIDIYAKLVTLI 719
Query: 414 GRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICD 473
+K+ GYVP T V HD+ + K + HSE++A+AFGLI T + I KNL++C
Sbjct: 720 REIKDIGYVPDTSIVLHDMSEELKEQYLLQHSEKIAVAFGLITTSATKPMRIFKNLRVCA 779
Query: 474 DCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
DCH AIK+ISK T REI +RD NR+H KDGICSCG+YW
Sbjct: 780 DCHSAIKYISKSTGREIILRDSNRFHRMKDGICSCGEYW 818
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 159/334 (47%), Gaps = 50/334 (14%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRI-PQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
V+A L+ +YS C + A ++FD++ R+L W + A NG ++ L +LE
Sbjct: 77 VVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGEMLE 136
Query: 67 IGLVPDNFTFPFALKAC--SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
+GL P+ FT A +AC L + G + + W TDV VG ALIDM+A+ +
Sbjct: 137 LGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDL 196
Query: 125 VNARQVFDKILER---------------------------------DPSEATLVTVISAS 151
V A++VFD ++ER +P ++ ++ISA
Sbjct: 197 VAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISAC 256
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV---ARNLFEQLREKRVV 208
++ ++ G++LH + R + V LVDMYAK + + AR +F+ + V+
Sbjct: 257 TELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVM 316
Query: 209 SWNAMITGYAMHG-HSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
SW A+I+GY G + LF +M +E ++P+HIT+ +L AC+ D GR
Sbjct: 317 SWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAH 376
Query: 267 MVRDYHIDPSVQHY----TCMVDLLGHSGRLDEA 296
+++ S+ H +V + SG ++EA
Sbjct: 377 VLK-----TSIAHVNVVGNALVSMYAESGCMEEA 405
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 175/416 (42%), Gaps = 53/416 (12%)
Query: 2 GF-GFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
GF G + L+ +++ L A ++FD + +R +W +LI Y G +EL
Sbjct: 174 GFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVEL 233
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ +L+ G PD ++ + AC+ L ++ G+++H +R +D V L+DMYAK
Sbjct: 234 FLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAK 293
Query: 121 CS---CVVNARQVFDKILERD----------------------------------PSEAT 143
+ +AR+VF + + P+ T
Sbjct: 294 LKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHIT 353
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
++ A A+++ GR++H + V ALV MYA+ G ++ AR F+QL
Sbjct: 354 YSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLY 413
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMF 263
E ++S + + + + + E M D V TF +LSA + GL +G+
Sbjct: 414 ETNILSMSPDVETERNNASCSSKI---EGMDDGVST--FTFASLLSAAASVGLLTKGQKL 468
Query: 264 FE-SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCK 320
SM + D + + +V + G L++AC +M+ D V W ++++
Sbjct: 469 HALSMKAGFRSDQGISN--SLVSMYARCGYLEDACRAFDEMK---DHNVISWTSIISGLA 523
Query: 321 LHGHVKLAELALEKLI--ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
HG+ K A +I ++P+D +LS EG R + D G+
Sbjct: 524 KHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGL 579
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 38/216 (17%)
Query: 92 GRRIHEDVIRNK-WETDVFVGAALIDMYAKCSCVVNARQVFDKI---------------L 135
GR +H ++R++ +TD V +L+ MY+KC V AR+VFD++ L
Sbjct: 59 GRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCL 118
Query: 136 ERDPSEATLVTVISA--------------SADIAALPQ------GRELHGFSWRHRF-EL 174
R+ +E + ++ +A A PQ G + GF + F
Sbjct: 119 ARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGT 178
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
+V V AL+DM+A+ G + A+ +F+ L E+ V W +IT Y G ++K ++LF M
Sbjct: 179 DVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHML 238
Query: 235 DE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
D+ +PD + ++SAC+ G G+ +R
Sbjct: 239 DDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALR 274
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF ++ LV +Y+ C L +A + FD + N+ W +I A +G + A+ ++
Sbjct: 476 GFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMF 535
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG-AALIDMYAK 120
+ ++ G+ P++ T+ L ACS + ++EG+ + ++ A ++D+ A+
Sbjct: 536 HDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLAR 595
Query: 121 CSCVVNARQVFDKI 134
V ARQ +++
Sbjct: 596 SGLVEEARQFINEM 609
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/545 (39%), Positives = 312/545 (57%), Gaps = 35/545 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F ++ +A L+ YS D + A +LF +P+ + +NVL+ YAWNG + ++EL+
Sbjct: 330 FVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFK 389
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
L G NF F L + ++ GR+IH I +++ VG +L+DMYAKC
Sbjct: 390 ELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCG 449
Query: 123 CVVNARQVF-------------------DKILERD--------------PSEATLVTVIS 149
A ++F K L D AT +++
Sbjct: 450 EFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVR 509
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A A +A+L G++LH + NV +ALVDMYAKCG +K A +F+++ + VS
Sbjct: 510 ACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVS 569
Query: 210 WNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WNA+I+ YA +G L LFE+M + +QPD ++ + +L ACS GL +EG +F+SM
Sbjct: 570 WNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMT 629
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
R Y + P +HY +D+L GR DEA L+ QM +PD +W ++LNSC +H + +LA
Sbjct: 630 RIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELA 689
Query: 329 ELALEKLIELEP-HDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
+ A +L ++ DA YV +SNIYA A W+ V K++K M +RG+KK A SW+E+K+
Sbjct: 690 KKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKH 749
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K H F + D +HP EI KL LE +M + GY P + H+V+ + K + HSER
Sbjct: 750 KTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDSSCALHNVDEEVKVESLKYHSER 809
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
+AIAF LI+TP+G+ +L+ KNL+ C DCH AIK ISKI REITVRD +R+HHF+DG C+
Sbjct: 810 IAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVRREITVRDSSRFHHFRDGFCT 869
Query: 508 CGDYW 512
C DYW
Sbjct: 870 CRDYW 874
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 173/385 (44%), Gaps = 38/385 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G+ V++ L+ Y L A QLF+ IP+R+ +N L+ Y+ G AI L
Sbjct: 227 LGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINL 286
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
++++ E+G P FTF L A L IE G+++H V++ + +VFV AL+D Y+K
Sbjct: 287 FFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSK 346
Query: 121 CSCVVNARQVFDKILERDP-SEATLV--------------------------------TV 147
VV A ++F ++ E D S LV T+
Sbjct: 347 HDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATL 406
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+S +A L GR++H + + V +LVDMYAKCG A +F L +
Sbjct: 407 LSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSS 466
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V W AMI+ Y G L LF +M + ++ D T+ ++ AC+ G+
Sbjct: 467 VPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSH 526
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
++ +I +V + +VD+ G + +A + +M V+ + W AL+++ +G
Sbjct: 527 IIGSGYIS-NVFSGSALVDMYAKCGSIKDALQMFQEMPVR-NSVSWNALISAYAQNGDGD 584
Query: 327 LAELALEKLIE--LEPHDAGNYVIL 349
E+++ L+P IL
Sbjct: 585 CTLRLFEEMVRSGLQPDSVSLLSIL 609
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 148/351 (42%), Gaps = 51/351 (14%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + LV + L+ A +LFD +P +N+F N +I Y +G
Sbjct: 96 GFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSG--------- 146
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ E R + + + ++ LI YA+
Sbjct: 147 --------------------------NLSEARTLFDSM----FQRTAVTWTMLIGGYAQN 176
Query: 122 SCVVNARQVFDKILER-----DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
+ R+ F +E DP +L T++S + ++ + R++H + ++ +
Sbjct: 177 N---QFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTL 233
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD- 235
V +L+D Y K + +A LF + E+ V++NA++TGY+ G + +A++LF KM++
Sbjct: 234 VVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEV 293
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
+P TF +L+A + + G+ +V+ + +V ++D R+ E
Sbjct: 294 GYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFV-WNVFVANALLDFYSKHDRVVE 352
Query: 296 ACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNY 346
A L +M + D + L+ +G VK L L K ++ D N+
Sbjct: 353 ASKLFYEMP-EVDGISYNVLVTCYAWNGRVK-ESLELFKELQFTGFDRRNF 401
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/539 (38%), Positives = 310/539 (57%), Gaps = 36/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ +Y C C+ F+ +P+++L W +I YA N + A+ L ++
Sbjct: 389 IGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEK 448
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D L ACS L + + + IH V++ D+ + A++++Y + + V AR
Sbjct: 449 MDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELALVDYAR 507
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
VF+ I +D P TLV+V+ A+A ++
Sbjct: 508 HVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALS 567
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+L +G+E+HGF R F L + +LVDMYA+CG ++ ARN+F ++++ ++ W +MI
Sbjct: 568 SLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMIN 627
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
MHG A+DLF KM DE V PDHITF+ +L ACS GL EG+ FE M +Y ++
Sbjct: 628 ANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLE 687
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P +HY C+VDLL S L+EA + M ++P VW ALL +C++H + L E+A +K
Sbjct: 688 PWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKK 747
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L++L ++GNYV++SN +A W V ++R +M +KK CSWIEV+NK H F++
Sbjct: 748 LLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMA 807
Query: 395 GDASHPNCDEIYAKLKWLEGRMKE-AGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
D SHP C+ IY KL +KE GY T+ VFHDV +EK M+ HSERLA+ +G
Sbjct: 808 RDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLVFHDVCEEEKTQMLYGHSERLALGYG 867
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+ T GT L ITKNL+ICDDCH K S+I++R + VRD +R+HHF+ G+CSCGD+W
Sbjct: 868 LLVTSKGTCLRITKNLRICDDCHAFFKIASEISQRTLVVRDASRFHHFERGLCSCGDFW 926
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 148/316 (46%), Gaps = 37/316 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L TK VH+Y C ++A ++FD++ +R +F WN +I A G Y AIELY + +G
Sbjct: 84 LDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLG 143
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D FTFP LKAC A G IH ++ + VFV ALI MYAKC + AR
Sbjct: 144 VSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGAR 203
Query: 129 QVFDK-ILERD----------------------------------PSEATLVTVISASAD 153
+FD ++E+D + T V+ + A
Sbjct: 204 VLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEG 263
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+ GR +H + +V V AL+ MYA CG ++ A +F+ + K VSWN +
Sbjct: 264 PTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTL 323
Query: 214 ITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
++G + + A++ F+ M+D Q PD ++ + +++A R G M + +
Sbjct: 324 LSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAG-MEVHAYAIKHG 382
Query: 273 IDPSVQHYTCMVDLLG 288
ID ++ ++D+ G
Sbjct: 383 IDSNMHIGNSLIDMYG 398
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 177/375 (47%), Gaps = 68/375 (18%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDR--IPQRNLFLWNVLIRAYAWNGPYEVAIE 59
G+G + L+ +Y+ C L A LFD + + + WN +I A+ G A+
Sbjct: 178 GYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALS 237
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
L+ R+ E+G+ + +TF AL+AC + I+ GR IH ++++ TDV+V ALI MYA
Sbjct: 238 LFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYA 297
Query: 120 KCSCVVNARQVFDKILERD---------------------------------PSEATLVT 146
C + +A +VF +L +D P + +++
Sbjct: 298 NCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLN 357
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+I+AS A L G E+H ++ +H + N+ + +L+DMY KC VK + FE + EK
Sbjct: 358 MIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKD 417
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACS------------- 252
++SW +I GYA + AL+L K++ +++ D + +L ACS
Sbjct: 418 LISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHG 477
Query: 253 ---RGGLFD------EGRMFFESMVRDY--HIDPSVQ-----HYTCMVDLLGHSGRLDEA 296
+GGL D ++ E + DY H+ S+ +T M+ H+G EA
Sbjct: 478 YVLKGGLADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEA 537
Query: 297 CDL---IMQMRVKPD 308
+L +++ ++PD
Sbjct: 538 LELFNSLIETNIEPD 552
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 128/291 (43%), Gaps = 45/291 (15%)
Query: 70 VPDNFTFPF------ALKACSALSAIEEGRRIHEDVIRNKWETD-VFVGAALIDMYAKCS 122
+P FP AL+ C++ A+ +G+++H ++ + D VF+ + MY KC
Sbjct: 37 LPTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCG 96
Query: 123 CVVNARQVFDKILERD-----------PSEATLVT---------VISASADIAALP---- 158
+A +VFDK+ ER S V V+ S D P
Sbjct: 97 SFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLK 156
Query: 159 ---------QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ--LREKRV 207
G E+HG + + + V V AL+ MYAKCG + AR LF+ + +
Sbjct: 157 ACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDP 216
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSWN++I+ + G S +AL LF +M++ V+ + TFV L AC GR
Sbjct: 217 VSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAV 276
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
+++ H V ++ + + G++++A + M K D W LL+
Sbjct: 277 ILKSNHF-TDVYVSNALIAMYANCGQMEDAERVFKSMLFK-DCVSWNTLLS 325
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 84/151 (55%), Gaps = 4/151 (2%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF ++A LV +Y+ C + NA +F+ + QR+L LW +I A +G + AI+L+
Sbjct: 583 GFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLF 642
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMYA 119
++ + ++PD+ TF L ACS + EG++ H ++++N+++ + + A L+D+ A
Sbjct: 643 SKMTDENVLPDHITFLALLYACSHSGLVVEGKQ-HFEIMKNEYKLEPWPEHYACLVDLLA 701
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISA 150
+ + + A F + + +PS ++ A
Sbjct: 702 RSNSLEEAYH-FVRNMPIEPSAEVWCALLGA 731
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/537 (37%), Positives = 305/537 (56%), Gaps = 33/537 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+ +YS C + +++F + Q+N+ W +I +Y G ++ L+ + G
Sbjct: 122 LGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEG 181
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD F AL A + +++ G+ +H IRN E + V AL++MY KC + AR
Sbjct: 182 IRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEAR 241
Query: 129 QVFDKILERD--------------------------------PSEATLVTVISASADIAA 156
+FD + ++D P+ T+ ++ A+A +++
Sbjct: 242 FIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQLRPNAVTMACILPAAASLSS 301
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
L +GRE+H ++ R + + V ALVDMY KCG + +AR LF+ L K ++SW MI G
Sbjct: 302 LERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAG 361
Query: 217 YAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
Y MHG A+ LFE+MK +QPD +F +L ACS GL DEG FF +M ++ I+P
Sbjct: 362 YGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEP 421
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
++HY CMVDLL H+G L EA + I M ++PD +W +LL C++H +VKLAE E +
Sbjct: 422 KLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMV 481
Query: 336 IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG 395
ELEP + G YV+L+NIYA A WE V KL+ + RG++++ CSWIEV+ KAH F +
Sbjct: 482 FELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAE 541
Query: 396 DASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLI 455
+ +HP I L + RM+E G+ P + ++ +C HS +LA+AFG++
Sbjct: 542 NRNHPQGMRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVL 601
Query: 456 NTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
N G + +TKN ++C CH A KFISK+ REI +RD NR+HHF++G CSC YW
Sbjct: 602 NLSQGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRDSNRFHHFEEGRCSCRGYW 658
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 170/388 (43%), Gaps = 66/388 (17%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + L+ Y+ + + +A +FD +PQR++ WN +I A NG Y+ A+EL+
Sbjct: 14 GFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELF 73
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+ G D+ T + AC G +H +R ++ +G AL+DMY+ C
Sbjct: 74 VRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNC 133
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
S + ++F + +++ P + + +
Sbjct: 134 SDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSAL 193
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A A +L G+ +HG++ R+ E + V AL++MY KCG ++ AR +F+ + +K +
Sbjct: 194 DAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTI 253
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
SWN +I GY+ + +A LF +M +++P+ +T +L A + + GR V
Sbjct: 254 SWNTLIGGYSRSNLANEAFTLFNEMLLQLRPNAVTMACILPAAASLSSLERGREMHAYAV 313
Query: 269 R------------------------------DYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
R D + ++ +T M+ G GR +A
Sbjct: 314 RRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIA 373
Query: 299 LIMQMR---VKPDPGVWGALLNSCKLHG 323
L QM+ ++PD G + A+L +C G
Sbjct: 374 LFEQMKGSGIQPDAGSFSAILYACSHSG 401
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 127/316 (40%), Gaps = 47/316 (14%)
Query: 91 EGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP----------- 139
+G +H +++ + V ALI YAK + + +A VFD++ +RD
Sbjct: 2 DGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCA 61
Query: 140 ----------------------SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
TL++V+ A G +HG+S R
Sbjct: 62 SNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETS 121
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE- 236
+ AL+DMY+ C + +F + +K VVSW AMIT Y GH K LF++M E
Sbjct: 122 LGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEG 181
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
++PD L A + G+ +R+ I+ + ++++ G ++EA
Sbjct: 182 IRPDVFAITSALDAFAGNESLKHGKSVHGYAIRN-GIEEVLPVANALMEMYVKCGYMEEA 240
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL----EKLIELEPHDAGNYVILSNI 352
I K D W L+ + LA A E L++L P N V ++ I
Sbjct: 241 -RFIFDHVTKKDTISWNTLIGG---YSRSNLANEAFTLFNEMLLQLRP----NAVTMACI 292
Query: 353 YARAANWEGVAKLRKL 368
AA+ + + R++
Sbjct: 293 LPAAASLSSLERGREM 308
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/536 (37%), Positives = 312/536 (58%), Gaps = 33/536 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
LA L+ +YS C + +Q+F + Q+N+ W +I +Y G ++ L ++ G
Sbjct: 555 LANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDG 614
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD F AL A + ++++G+ +H IRN E + V AL++MY KC V AR
Sbjct: 615 IRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEAR 674
Query: 129 QVFDKILERD--------------------------------PSEATLVTVISASADIAA 156
+FD++ +D P+ T+ ++ A+A I++
Sbjct: 675 LIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQFRPNAVTMTCILPAAASISS 734
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
L +GRE+H ++ R F + ALVDMY KCG + VAR LF++L +K ++SW MI G
Sbjct: 735 LERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAG 794
Query: 217 YAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
Y MHG A+ LFE+M+ ++PD +F +L AC GL EGR FF++M ++Y I+P
Sbjct: 795 YGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEP 854
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
++HYTC+VDLL +G L EA + I M ++PD +W +LL+ C++H +VKLAE +K+
Sbjct: 855 KLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKV 914
Query: 336 IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG 395
+LEP + G YV+L+NIYA A WE V KL+ + RG++++ SWIEV++K H F++
Sbjct: 915 FKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIAD 974
Query: 396 DASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLI 455
+ +HP+ + I L + RM++ G+ P + ++ +C HS +LA+AFG++
Sbjct: 975 NRNHPDWNRIAEFLDDVARRMRQEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVL 1034
Query: 456 NTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
N P+G + +TKN K+C CH A KFISK+ REI +RD +R+H F+ G CSC Y
Sbjct: 1035 NLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHRFEGGRCSCRGY 1090
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 170/384 (44%), Gaps = 37/384 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GFG + L+ Y+ + + +A +F+R+P+++ WN +I + NG AIEL
Sbjct: 446 LGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIEL 505
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+ G D+ T L AC+ GR +H ++ + + AL+DMY+
Sbjct: 506 FIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSN 565
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
CS + Q+F + +++ P + +
Sbjct: 566 CSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSA 625
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A A +L QG+ +HG++ R+ E + V AL++MY KC V+ AR +F+++ K V
Sbjct: 626 LHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDV 685
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+SWN +I GY+ + ++ LF M + +P+ +T +L A + + GR
Sbjct: 686 ISWNTLIGGYSRNNFPNESFSLFSDMLLQFRPNAVTMTCILPAAASISSLERGREIHAYA 745
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+R ++ S +VD+ G L A ++ K + W ++ +HG K
Sbjct: 746 LRRGFLEDSYAS-NALVDMYVKCGALLVA-RVLFDRLTKKNLISWTIMIAGYGMHGFGKH 803
Query: 328 AELALEKL--IELEPHDAGNYVIL 349
A E++ +EP A IL
Sbjct: 804 AIALFEQMRGSGIEPDAASFSAIL 827
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 35/297 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQR-NLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
L +KLV +Y C + +A ++FD + + N+ +WN+++ YA G +E ++ L+ ++ E+
Sbjct: 352 LGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHEL 411
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ PD LK + LS +G H +++ + V ALI YAK + + +A
Sbjct: 412 GIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDA 471
Query: 128 RQVFDKILERDP----------------SEA-----------------TLVTVISASADI 154
VF+++ +D SEA TL++V+ A A
Sbjct: 472 VLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQS 531
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
GR +HG+S + + AL+DMY+ C + +F + +K VVSW AMI
Sbjct: 532 RYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMI 591
Query: 215 TGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
T Y G K L ++M D ++PD L A + +G+ +R+
Sbjct: 592 TSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRN 648
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 145/332 (43%), Gaps = 50/332 (15%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G G +A L+ +YS C + +A ++FD + R+ WN +I NG + A++L
Sbjct: 233 LGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDL 292
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK--WET--------DVFV 110
+ ++ G + T L AC+ L G+ +H +++ W D +
Sbjct: 293 FSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAAL 352
Query: 111 GAALIDMYAKCSCVVNARQVFDKILERD-------------------------------- 138
G+ L+ MY KC + +AR+VFD + +
Sbjct: 353 GSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELG 412
Query: 139 --PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
P E + ++ ++ G HG+ + F V AL+ YAK ++ A
Sbjct: 413 IAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAV 472
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGG 255
+F ++ + +SWN++I+G + +G +++A++LF +M + Q D +T + VL AC++
Sbjct: 473 LVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSR 532
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLL 287
+ GR +V Y + + T + + L
Sbjct: 533 YWFAGR-----VVHGYSVKTGLIGETSLANAL 559
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 163/389 (41%), Gaps = 66/389 (16%)
Query: 4 GFHPVLATKLVHLYSACDCLHNAHQLFDRIPQR--NLFLWNVLIRAYAWNGPYEVAIELY 61
G VL +LV Y C L A +FD +P + ++ +W L+ AYA G ++ A+ L+
Sbjct: 133 GKGSVLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLF 192
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ G+ PD LK S+L ++ EG IH + + V ALI +Y++C
Sbjct: 193 RQMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRC 252
Query: 122 SCVVNARQVFDKILERDP---------------------------------SEATLVTVI 148
+ +A +VFD + RD S T+++V+
Sbjct: 253 GRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVL 312
Query: 149 SASADIAALPQGRELHGFSWRHRFEL----------NVKVKTALVDMYAKCGLVKVARNL 198
A A + G+ +HG+S + + + + LV MY KCG + AR +
Sbjct: 313 PACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRV 372
Query: 199 FEQLREK-RVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLS-----AC 251
F+ + K V WN ++ GYA G ++L LF +M + + PD +L +C
Sbjct: 373 FDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSC 432
Query: 252 SRGGLFDEGRMFFESMVRDYHIDPSVQHYTC--MVDLLGHSGRLDEACDLIMQMRVKPDP 309
+R GL G + + Q C ++ S + +A L+ + D
Sbjct: 433 ARDGLVAHGYIV--------KLGFGAQCAVCNALISFYAKSNMIGDAV-LVFNRMPRQDT 483
Query: 310 GVWGALLNSCKLHGHVKLAELALEKLIEL 338
W ++++ C +G L A+E I +
Sbjct: 484 ISWNSVISGCSSNG---LNSEAIELFIRM 509
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + LV +Y C L A LFDR+ ++NL W ++I Y +G + AI L+
Sbjct: 749 GFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALF 808
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRI 95
++ G+ PD +F L AC EGRR
Sbjct: 809 EQMRGSGIEPDAASFSAILYACCHSGLAAEGRRF 842
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/573 (38%), Positives = 324/573 (56%), Gaps = 71/573 (12%)
Query: 11 TKLVHLYSACDCLHNAHQL--FDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
TKL+ + + D ++ L F ++ N FLW +IR YA G + Y R+ G
Sbjct: 78 TKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDG 137
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIH-EDVIRNKWETDVFVGAALIDMY--------- 118
+ P +FTF KAC A ++ G+++H + ++ + +D++VG ++ID+Y
Sbjct: 138 VGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCA 197
Query: 119 ----------------------AKCSCVVNARQVFDKILERD----------------PS 140
AK + +A +FD + +D P
Sbjct: 198 RKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPK 257
Query: 141 EA-----------------TLVTVISASADIAALPQGRELHGFSWRHRF--ELNVKVKTA 181
EA TL VISA A + A+ + + R F NV V +A
Sbjct: 258 EALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSA 317
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPD 240
L+DMY+KCG A +FE ++E+ V S+++MI GYAMHG + AL LF M K E++P+
Sbjct: 318 LIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPN 377
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
+TF+G+LSACS GL ++GR F M + + + PS HY CMVDLLG +G L+EA DL+
Sbjct: 378 KVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLV 437
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
M ++P+ GVWGALL +C++HG+ +A++A +L +LEP+ GNY++LSNIYA A WE
Sbjct: 438 KTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWE 497
Query: 361 GVAKLRKLMIDRGIKKSIACSWIEVKN-KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEA 419
V+KLRK++ ++G KK+ CSW E KN + H F +GD +HP EI LK L R++
Sbjct: 498 EVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSH 557
Query: 420 GYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAI 479
GY P S +D+ +DEK ++ HSE+LA+A+GL+ T G + I KN++IC+DCH +
Sbjct: 558 GYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVM 617
Query: 480 KFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
S+IT REI VRD R+HHF +G CSCG++W
Sbjct: 618 CAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 155/361 (42%), Gaps = 69/361 (19%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAY------------- 48
GF + ++ LY C L A ++FD + +R++ W LI AY
Sbjct: 173 GFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLF 232
Query: 49 ---------AW---------NGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIE 90
AW NG + A+E + ++ ++G+ D T + AC+ L A++
Sbjct: 233 DDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVK 292
Query: 91 EGRRIHEDVIRNKW--ETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVI 148
I + R+ + +V VG+ALIDMY+KC A +VF+ + ER+ V
Sbjct: 293 HANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERN--------VF 344
Query: 149 SASADIAALPQGRELHG--FSWRHRFELNVKV-----KTALVDMYAKC---GLVKVARNL 198
S S+ I G +HG S F +K K + + + C GLV+ R L
Sbjct: 345 SYSSMIL----GYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQL 400
Query: 199 FEQLREKRVVS-----WNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSR 253
F ++ + V+ + M+ G +ALDL + M ++P+ + +L AC
Sbjct: 401 FAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMP--MEPNGGVWGALLGACRI 458
Query: 254 GGLFDEGRMFFESMVRDYHIDPS-VQHYTCMVDLLGHSGRLDEACDL---IMQMRVKPDP 309
G D ++ + + ++P+ + +Y + ++ +GR +E L I + K +P
Sbjct: 459 HGNPDIAQIAANEL---FKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNP 515
Query: 310 G 310
G
Sbjct: 516 G 516
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/556 (38%), Positives = 304/556 (54%), Gaps = 69/556 (12%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +F+ + + +WN +I Y +G A EL+ R++ + D FTF L AC+
Sbjct: 247 ARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACAN 306
Query: 86 LSAIEEGRRIHEDVIRNKW----ETDVFVGAALIDMYAKC-------------------- 121
+ G+ +H +IR + E + V AL+ Y+KC
Sbjct: 307 VGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVS 366
Query: 122 -----------SCVVNARQVFDKILERD-------------------------------- 138
SC+ A +VF+++ ++
Sbjct: 367 WNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENV 426
Query: 139 -PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
P + T I+A ++ AL G++LHG + FE + AL+ MYA+CG VK A
Sbjct: 427 KPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHL 486
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGL 256
+F + VSWNAMI+ HGH +AL+LF++M E + PD I+F+ VL+AC+ GL
Sbjct: 487 MFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGL 546
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
DEG +FESM RD+ I P HYT ++DLLG +GR+ EA DLI M +P P +W A+L
Sbjct: 547 VDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAIL 606
Query: 317 NSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKK 376
+ C+ G ++L A ++L ++ P G Y++LSN Y+ A W A++RKLM DRG+KK
Sbjct: 607 SGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKK 666
Query: 377 SIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDE 436
CSWIE NK H FL GD HP E+Y L+ + +M++ GYVP T+ V HD+E +
Sbjct: 667 EPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQ 726
Query: 437 KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVN 496
K +++ HSERLA+ FGL+N P G + + KNL+ICDDCH AI F+SK REI VRDV
Sbjct: 727 KEHILFAHSERLAVGFGLLNLPPGATVTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVR 786
Query: 497 RYHHFKDGICSCGDYW 512
R+HHFKDG CSCG+YW
Sbjct: 787 RFHHFKDGECSCGNYW 802
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 170/383 (44%), Gaps = 57/383 (14%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
PV AT LV Y+A D L A FD +P +R+ L N +I AYA A+ ++ L
Sbjct: 88 PVSATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSL 147
Query: 65 LEIG-LVPDNFTFPFALKACSALS--AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
L G L PD+++F L A L ++ ++H V+++ + V AL+ +Y KC
Sbjct: 148 LASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKC 207
Query: 122 S---CVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
+AR+V D++ +D +W
Sbjct: 208 ESPEATRDARKVLDEMPNKD--------------------------DLTW---------- 231
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ 238
T +V Y + G V AR++FE++ K V WNAMI+GY G + +A +LF +M E
Sbjct: 232 -TTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERV 290
Query: 239 P-DHITFVGVLSACSRGGLFDEGRMFFESMVR---DYHIDPSVQHYTCMVDLLGHSGRLD 294
P D TF VLSAC+ GLF G+ ++R ++ + ++ +V G +
Sbjct: 291 PLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIA 350
Query: 295 EACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL--ALEKLIELEPHDAGNYVILSNI 352
A + M +K D W +L+ G+V+ + L A+E E+ + +++++ +
Sbjct: 351 VARRIFDNMTLK-DVVSWNTILS-----GYVESSCLDKAVEVFEEMPYKNELSWMVMVSG 404
Query: 353 YARAANWEGVAKLRKLMIDRGIK 375
Y E KL M +K
Sbjct: 405 YVHGGFAEDALKLFNKMRSENVK 427
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF L+ +Y+ C + AH +F +P + WN +I A +G A+EL
Sbjct: 459 LGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALEL 518
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG----AALID 116
+ R++ G+ PD +F L AC+ ++EG R E + R + + G LID
Sbjct: 519 FDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKR---DFGIIPGEDHYTRLID 575
Query: 117 MYAKCSCVVNARQVFDKILERDPSEATLVTVISA 150
+ + + AR + K + +P+ + ++S
Sbjct: 576 LLGRAGRIGEARDLI-KTMPFEPTPSIWEAILSG 608
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/545 (36%), Positives = 316/545 (57%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF ++ L+ +YS CL A ++ + + +R++ W +I Y + E A+ +
Sbjct: 376 GFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATF 435
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + G+ PDN A AC+ + A+ +G +IH V + + D+ + L+++YA+C
Sbjct: 436 KEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARC 495
Query: 122 SCVVNARQVFDKILERDP--------------------------SEA-------TLVTVI 148
A +F +I +D S+A T ++ I
Sbjct: 496 GRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAI 555
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A++A + QG+++HG + + +V AL+ +Y KCG ++ A+ +F ++ + V
Sbjct: 556 SALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEV 615
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWN +IT + HG +ALDLF++MK E ++P+ +TF+GVL+ACS GL +EG +F+SM
Sbjct: 616 SWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSM 675
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
Y ++P HY C+VD+LG +G+LD A + +M + + +W LL++CK+H ++++
Sbjct: 676 SNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEI 735
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
ELA + L+ELEPHD+ +YV+LSN YA W ++RK+M DRGI+K SWIEVKN
Sbjct: 736 GELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKN 795
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
HAF GD HP D+IY L L R+ + GY ++FH+ E ++K HSE+
Sbjct: 796 AVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEK 855
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+AFGL+ P L + KNL++CDDCH +KF S++T REI +RDV R+HHF G CS
Sbjct: 856 LAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKFTSEVTRREIVLRDVYRFHHFNSGSCS 915
Query: 508 CGDYW 512
CGDYW
Sbjct: 916 CGDYW 920
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 168/356 (47%), Gaps = 36/356 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G F + L+ LY C + AH +F+ + N+ LWN+++ AY + E++
Sbjct: 275 GMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIF 334
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ G+ P+ FT+P L+ C+ IE G +IH I+N +E+D++V LIDMY+K
Sbjct: 335 GQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKY 394
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
C+ AR++ + + +RD P L +
Sbjct: 395 RCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAA 454
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A I A+ QG ++H + + ++ + LV++YA+CG + A +LF ++ K +
Sbjct: 455 SACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEI 514
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WN +I+G+ +AL +F KM + + TF+ +SA + +G+
Sbjct: 515 TWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRA 574
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
V+ H + + ++ L G G +++A + +M ++ + W ++ SC HG
Sbjct: 575 VKTGHTSET-EVANALISLYGKCGSIEDAKMIFSEMSLRNEVS-WNTIITSCSQHG 628
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 171/401 (42%), Gaps = 43/401 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G G ++ L+ LY+ + A Q+F + R+ W ++ YA G + A LY
Sbjct: 73 GLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLY 132
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY--- 118
++ ++P + L AC+ +GR IH V + + ++ FVG ALI +Y
Sbjct: 133 SQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGF 192
Query: 119 ----------------------------AKCSCVVNARQVFDKILERD--PSEATLVTVI 148
A+C A Q+FD++ P T+ +++
Sbjct: 193 GSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLL 252
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A A + L +G++LH + + + + +L+D+Y KCG ++ A ++F VV
Sbjct: 253 AACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVV 312
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
WN M+ Y K+ ++F +M+ + P+ T+ +L C+ G + G
Sbjct: 313 LWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLS 372
Query: 268 VRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+++ + D V ++D+ LD+A I++M K D W +++ H
Sbjct: 373 IKNGFESDMYVS--GVLIDMYSKYRCLDKA-RKILEMLEKRDVVSWTSMIAGYVQH---D 426
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRK 367
E AL E++ D G + + + A+ G+ +R+
Sbjct: 427 FCEEALATFKEMQ--DCGVWPDNIGLASAASACAGIKAMRQ 465
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
P E+H S + + L+D+YAK GLV AR +F++L + VSW AM++GY
Sbjct: 60 PLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGY 119
Query: 218 AMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRM 262
A G +A L+ +M V P VLSAC++G LF +GRM
Sbjct: 120 AQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRM 165
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/544 (37%), Positives = 315/544 (57%), Gaps = 35/544 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F L L+HLY C + A ++FD + ++++ W LI YA N E AI L
Sbjct: 82 FAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLP 141
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+L+ P+ FTF LKA A + GR+IH ++ W DV+VG+AL+DMYA+C
Sbjct: 142 GMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCG 201
Query: 123 CVVNARQVFDKI------------------------------LERDPSEATLVT---VIS 149
+ A VFDK+ + R+ EAT T V S
Sbjct: 202 MMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFS 261
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
+ A + AL QG+ +H + R ++ L+DMYAK G + AR +F+++ +K +V+
Sbjct: 262 SIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVT 321
Query: 210 WNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WN M+T +A +G +A+ FE+M K + + +TF+ +L+ACS GGL EG+ +FE M+
Sbjct: 322 WNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFE-MM 380
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
++Y ++P + H+ +V LLG +G L+ A I +M ++P VWGALL +C++H + K+
Sbjct: 381 KEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAKVG 440
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
+ A + + EL+P D+G V+L NIYA W+ A++R++M G+KK ACSW+E++N
Sbjct: 441 QFAADHVFELDPDDSGPPVLLYNIYASTGQWDAAARVRRIMKTTGVKKEPACSWVEMENS 500
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
H F++ D +HP +EIY + ++++ GYVP + V V++ E+ + HSE+L
Sbjct: 501 VHMFVANDDTHPRAEEIYKMWGQISKKIRKEGYVPDMDYVLLRVDDQEREANLQYHSEKL 560
Query: 449 AIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
A+AF LI P G + I KN++IC DCH A K+ISK+ REI VRD NR+HHF +G CSC
Sbjct: 561 ALAFALIEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSNGSCSC 620
Query: 509 GDYW 512
DYW
Sbjct: 621 ADYW 624
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 149/307 (48%), Gaps = 37/307 (12%)
Query: 64 LLEIG-LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
LL+ G L P + + AC+ +E+ R++H + +++ D F+ +LI +Y KC
Sbjct: 41 LLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCG 100
Query: 123 CVVNARQVFDKILERD----------------PSEA-----------------TLVTVIS 149
V+ AR+VFD++ +D P EA T +++
Sbjct: 101 SVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLK 160
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A+ A GR++H + + + +V V +AL+DMYA+CG++ +A +F++L K VS
Sbjct: 161 AAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVS 220
Query: 210 WNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WNA+I+G+A G AL F E +++ + H T+ V S+ +R G ++G+ M+
Sbjct: 221 WNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMI 280
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ + T ++D+ SG + +A + ++ K D W +L + +G K A
Sbjct: 281 KSRQKMTAFAGNT-LLDMYAKSGSMIDARKVFDRVDDK-DLVTWNTMLTAFAQYGLGKEA 338
Query: 329 ELALEKL 335
E++
Sbjct: 339 VSHFEEM 345
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 7/204 (3%)
Query: 136 ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
E P+ T I+A A L R++H RF + + +L+ +Y KCG V A
Sbjct: 46 ELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEA 105
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRG 254
R +F+++R K +VSW ++I GYA + +A+ L M K +P+ TF +L A
Sbjct: 106 RKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAH 165
Query: 255 GLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV-W 312
GR V+ D+H D V + ++D+ G +D A + ++ K GV W
Sbjct: 166 ADSGIGRQIHALAVKCDWHEDVYVG--SALLDMYARCGMMDMATAVFDKLDSK--NGVSW 221
Query: 313 GALLNSCKLHGHVKLAELALEKLI 336
AL++ G + A + +++
Sbjct: 222 NALISGFARKGDGETALMTFAEML 245
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/552 (38%), Positives = 319/552 (57%), Gaps = 65/552 (11%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +FDRI + N F+WN +IR Y+ + E A+ LY+ +L + + +TFPF LKACS+
Sbjct: 71 ARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSS 130
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAAL------------------------------- 114
+SA+EE ++IH +I+ + ++++ +L
Sbjct: 131 MSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSM 190
Query: 115 IDMYAKCSCVVNARQVFDKILERD----------------PSEA---------------- 142
ID Y KC + A ++F+ + ER+ P EA
Sbjct: 191 IDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDN 250
Query: 143 -TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
LV+ + A AD+ L QG+ +H + +H E++ + L+DMYAKCG ++ A +F +
Sbjct: 251 VALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRK 310
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEG 260
+ EK V W AMI+GYA+HG +AL+ F KM+ V+P+ +TF G+L+ACS GL E
Sbjct: 311 MEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEA 370
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
++ FESM R + PS++HY CMVDLLG +G L EA +LI M VKP+ +WGALLN+C
Sbjct: 371 KLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACH 430
Query: 321 LHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIAC 380
+HG+++L + + LI+++P G Y+ L++I+A A W A++R+ M ++G+ K C
Sbjct: 431 IHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGC 490
Query: 381 SWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANM 440
S I V AH FL+GD SHP EI L+ + R++E GY P + D+E+ EK
Sbjct: 491 SVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETA 550
Query: 441 ICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHH 500
I HSE+LA+ FGLI+T G + I KNL++C+DCH IK ISK+ REI +RD R+H
Sbjct: 551 IHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHL 610
Query: 501 FKDGICSCGDYW 512
FKDG C+CGDYW
Sbjct: 611 FKDGNCTCGDYW 622
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P+L L+ +Y+ C L A ++F ++ ++ + +W +I YA +G A+E + ++
Sbjct: 285 PILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQT 344
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR-NKWETDVFVGAALIDMYAKCSCVV 125
G+ P+ TF L ACS + E + + E + R + ++ + ++D+ + +
Sbjct: 345 AGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLK 404
Query: 126 NARQVFDKI 134
A ++ + +
Sbjct: 405 EAEELIENM 413
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 73/171 (42%), Gaps = 5/171 (2%)
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAK--CGLVKVARNLFEQLREKRVVSWNAMITGYA 218
R++HG + L+ + L+ A G + AR +F+++ WN MI GY+
Sbjct: 35 RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYS 94
Query: 219 MHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
+AL L+ M P + TF +L ACS +E + +++ +
Sbjct: 95 NSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIK-MGFGSEI 153
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
++++ SG + A L Q+ + D W ++++ G +++A
Sbjct: 154 YTTNSLLNVYSKSGDIKSARLLFDQVDQR-DTVSWNSMIDGYTKCGEIEMA 203
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/549 (38%), Positives = 320/549 (58%), Gaps = 39/549 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+G L TKL+ L + + H LF +P + FL+N +I++ + + Y
Sbjct: 36 GYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYY 95
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+L + P N+TF +K+C+ LSA+ G+ +H + + + D +V AAL+ Y+KC
Sbjct: 96 RRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKC 155
Query: 122 SCVVNARQVFDKILER---------------------------------DPSEATLVTVI 148
+ ARQVFD++ E+ +P AT V+++
Sbjct: 156 GDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLL 215
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A A+ G +H + +LNVK+ TAL+++Y++CG V AR +F++++E V
Sbjct: 216 SACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVA 275
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQP--DHITFVGVLSACSRGGLFDEGRMFFES 266
+W AMI+ Y HG+ +A++LF KM+D+ P +++TFV VLSAC+ GL +EGR ++
Sbjct: 276 AWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKR 335
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK---PDPGVWGALLNSCKLHG 323
M + Y + P V+H+ CMVD+LG +G LDEA I Q+ P +W A+L +CK+H
Sbjct: 336 MTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHR 395
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
+ L ++LI LEP + G++V+LSNIYA + + V+ +R M+ ++K + S I
Sbjct: 396 NYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVI 455
Query: 384 EVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICC 443
EV+NK + F GD SH EIY L+ L R KE GY P +E V H VE +EK +
Sbjct: 456 EVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRY 515
Query: 444 HSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKD 503
HSE+LA+AFGL+ T D + I KNL+IC+DCH A K+IS ++ R+ITVRD R+HHF++
Sbjct: 516 HSEKLAVAFGLLKTVD-VAITIVKNLRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQN 574
Query: 504 GICSCGDYW 512
G CSC DYW
Sbjct: 575 GSCSCLDYW 583
>gi|15237212|ref|NP_200075.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g52630
gi|8953718|dbj|BAA98081.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008860|gb|AED96243.1| mitochondrial RNA editing factor 1 [Arabidopsis thaliana]
Length = 588
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/545 (39%), Positives = 321/545 (58%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P++A L++ YS ++ + F+ PQ++ W+ +I +A N +++E
Sbjct: 45 GLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFL 104
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+++ L PD+ P A K+C+ LS + GR +H ++ ++ DVFVG++L+DMYAKC
Sbjct: 105 KKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKC 164
Query: 122 SCVVNARQVFDKILERDP---------------------------------SEATLVTVI 148
+V AR++FD++ +R+ ++ + +VI
Sbjct: 165 GEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVI 224
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
S A+ L GR++HG S + F+ + V ++LV +Y+KCG+ + A +F ++ K +
Sbjct: 225 SVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLG 284
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
WNAM+ YA H H+ K ++LF++MK ++P+ ITF+ VL+ACS GL DEGR +F+ M
Sbjct: 285 IWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM 344
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
++ I+P+ +HY +VD+LG +GRL EA ++I M + P VWGALL SC +H + +L
Sbjct: 345 -KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTEL 403
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
A A +K+ EL P +G ++ LSN YA +E AK RKL+ DRG KK SW+E +N
Sbjct: 404 AAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERN 463
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K H F +G+ H EIY KL L M++AGY+ T V +V+ DEK I HSER
Sbjct: 464 KVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSER 523
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGLI P + + KNL++C DCH AIKF+S T R I VRD NR+H F+DG CS
Sbjct: 524 LAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCS 583
Query: 508 CGDYW 512
C DYW
Sbjct: 584 CNDYW 588
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/539 (37%), Positives = 309/539 (57%), Gaps = 35/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A L+ YS D + A LFD +P+ + +N++I YAWNG YE + +L+ RL
Sbjct: 281 VANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTS 340
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
NF F L + + GR+ H + ++V VG AL+DMYAKC +A
Sbjct: 341 FDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDAN 400
Query: 129 QVFDKILERDP---------------------------------SEATLVTVISASADIA 155
++F + R+ +AT + + ASA++A
Sbjct: 401 RIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLA 460
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
++ G++LH R +V + LVDMYA CG +K A +F+++ ++ +V WNA+I+
Sbjct: 461 SVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALIS 520
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
Y+ +G + F M + + PD ++F+ VL+ACS GL ++ +F SM + Y +D
Sbjct: 521 AYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLD 580
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P +HY M+D+L SGR +EA +LI +M +PD +W ++LNSC++H + LA+ A ++
Sbjct: 581 PRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQ 640
Query: 335 LIELEP-HDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
L +++ DA YV +SNIYA A WE AK++K M +RG+KK A SW+E+ ++ H F
Sbjct: 641 LFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFT 700
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
+ D +HP ++I K+ L M + GY P T +V+ + K + HSERLAIAF
Sbjct: 701 ANDRTHPQTEQIRRKINSLVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFA 760
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LINTP+G+ ++I KNL+ C DCH AIK ISKI REITVRD +R+HHF+DG CSCGDYW
Sbjct: 761 LINTPEGSPIIIMKNLRACVDCHAAIKVISKIVGREITVRDSSRFHHFRDGSCSCGDYW 819
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 164/373 (43%), Gaps = 40/373 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
GF ++ LV Y CL A QLF +P ++ +NV+I Y G E A++L
Sbjct: 172 FGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKL 231
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ + P FTF L + G++IH I+ + D+FV AL+D Y+K
Sbjct: 232 FMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSK 291
Query: 121 CSCVVNARQVFDKILERDPSEATLV---------------------------------TV 147
+ A+ +FD++ E D ++ T+
Sbjct: 292 HDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATM 351
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+S +A L GR+ H + V+V ALVDMYAKC + A +F L +
Sbjct: 352 LSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNS 411
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V W A+I+ Y G +AL +F++M ++ V D TF L A + G+ S
Sbjct: 412 VPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSS 471
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGH 324
++R + SV + +VD+ + G + +A ++ +M PD + W AL+++ +G
Sbjct: 472 VIR-LGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEM---PDRNIVCWNALISAYSQNGD 527
Query: 325 VKLAELALEKLIE 337
+ + +IE
Sbjct: 528 AEATFSSFADMIE 540
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 169/391 (43%), Gaps = 40/391 (10%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
+V Y L A +LF+ + RN W ++I Y+ N + A LY + G+ PD
Sbjct: 83 MVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPD 142
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+ TF L + ++E +IH +IR + + V +L+D Y K C+ A Q+F
Sbjct: 143 HITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFS 202
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
++ +D PS T ++ S +
Sbjct: 203 EMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIF 262
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G+++HG + + + ++ V AL+D Y+K + +A+NLF+++ E VS+N +ITGYA
Sbjct: 263 GQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAW 322
Query: 220 HGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
+G K+ DLF++++ + F +LS + GR V + VQ
Sbjct: 323 NGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAV-SEVQ 381
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
+VD+ + ++A + + + + W A+++ ++ E AL+ E+
Sbjct: 382 VGNALVDMYAKCEKFEDANRIFANLAYR-NSVPWTAIIS---IYVQKGFHEEALKMFKEM 437
Query: 339 EPHDA-GNYVILSNIYARAANWEGVAKLRKL 368
+ G+ ++ +AN V+ ++L
Sbjct: 438 NRENVHGDQATFASTLKASANLASVSLGKQL 468
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 40/228 (17%)
Query: 56 VAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDV-IRNKWETDVFVGAAL 114
V I + R+++ G P+ F F LK + I + R++ +++ RN ++ V
Sbjct: 29 VDIPVDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSG-- 86
Query: 115 IDMYAKCSCVVNARQVFDKILERD----------------PSEA---------------- 142
Y K + AR++F+ + R+ P EA
Sbjct: 87 ---YVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDH 143
Query: 143 -TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
T T++S D L + ++H R F ++ V +LVD Y K + +A LF +
Sbjct: 144 ITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSE 203
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVL 248
+ K VS+N MITGY +G +AL LF +M++ + QP TF +L
Sbjct: 204 MPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAML 251
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 6/169 (3%)
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM- 233
N +V Y K + AR LFE + + VSW MI GY+ + +A +L+ +M
Sbjct: 76 NTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMC 135
Query: 234 KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
+ V+PDHITF +LS E ++R + S+ + +VD + L
Sbjct: 136 RSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIR-FGFSASLIVFNSLVDSYCKTCCL 194
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHD 342
D A L +M K D + ++ +G E AL+ +++ D
Sbjct: 195 DIASQLFSEMPTK-DSVSFNVMITGYTKYG---FREEALKLFMQMRNMD 239
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/515 (40%), Positives = 305/515 (59%), Gaps = 42/515 (8%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GFG + L +++LY C + +A LF+++PQR+ WN++I A G + A
Sbjct: 39 LGFGSNLFLQNMILNLYGLCGEMGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGF 98
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+ P+ +V ++I + +
Sbjct: 99 FLRM------PNK---------------------------------NVRSWTSMISGFVQ 119
Query: 121 CSCVVNARQVFDKILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
C A +F K+ + P+E T+V+V++A AD+ L GR +H +S + F+ NV V
Sbjct: 120 CGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHV 179
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEV 237
L+DMY KCG ++ AR +F ++ E+ VVSW+AMI G AMHG + +AL LF +M K V
Sbjct: 180 CNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGV 239
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
+P+ +TF+G+L ACS GL DEGR FF SM DY + P ++HY C+VDL +G L+EA
Sbjct: 240 KPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAH 299
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAA 357
+ I+ M +KP+ VWGALL CK+H ++ LAE A++ L EL+P + G YV++SNIYA A
Sbjct: 300 EFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAE 359
Query: 358 NWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK 417
WE A++RKLM DRG+KK+ S I V H F++GD +HP ++I L +MK
Sbjct: 360 RWEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMK 419
Query: 418 EAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHI 477
GY P T V D+E EK + HSE+LA+ FGL+ TP+GT + I KNL++C+DCH
Sbjct: 420 RRGYAPKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCEDCHA 479
Query: 478 AIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
A+K IS I REI VRD NR+H F+DG CSC D+W
Sbjct: 480 ALKIISGIVSREIIVRDRNRFHCFRDGQCSCRDFW 514
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 42/277 (15%)
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
RL ++ +PD FT F LKAC LS + G+ IH + + +++F+ ++++Y C
Sbjct: 2 RLFDV--LPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCG 59
Query: 123 CVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
+ +A +F+K+ +RD +V IA L
Sbjct: 60 EMGDAMLLFEKMPQRDAVTWNIV--------IAQL------------------------- 86
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDH 241
AK G + A F ++ K V SW +MI+G+ G +A+DLF K++DE V+P+
Sbjct: 87 ----AKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNE 142
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
+T V VL+AC+ G D GR+ E + +V ++D+ G L+ A +
Sbjct: 143 VTVVSVLAACADLGDLDLGRIVHEYSTKS-GFKRNVHVCNTLIDMYVKCGCLENARRVFY 201
Query: 302 QMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
+M + W A++ +HG + A ++I+L
Sbjct: 202 EMEERTVVS-WSAMIAGLAMHGQAEEALCLFSEMIKL 237
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/504 (40%), Positives = 304/504 (60%), Gaps = 8/504 (1%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L +Y+ C + A LFD + ++NL WN++I YA NG E I L +++ G +PD
Sbjct: 196 LTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPD 255
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
T + A ++E RR+ + E D+ A++ YAK +A +F+
Sbjct: 256 QVTMSTIIAAYCQCGRVDEARRVFSEFK----EKDIVCWTAMMVGYAKNGREEDALLLFN 311
Query: 133 KILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCG 190
++L +P TL +V+S+ A +A+L G+ +HG S N+ V +AL+DMY+KCG
Sbjct: 312 EMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCG 371
Query: 191 LVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLS 249
+ AR++F + + VVSWNAMI G A +GH AL+LFE M + + +PD++TF+G+LS
Sbjct: 372 FIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILS 431
Query: 250 ACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
AC ++G+ +F+S+ + + P++ HY CMV+LLG +GR+++A LI M PD
Sbjct: 432 ACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDF 491
Query: 310 GVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLM 369
+W LL+ C G + AE+A L EL+P A Y++LSN+YA W+ VA +R LM
Sbjct: 492 LIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLM 551
Query: 370 IDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVF 429
+ +KK SWIE+ N+ H F S D +HP ++IY KL L G+++E G+ P T V
Sbjct: 552 KSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVL 611
Query: 430 HDVENDEKANMICCHSERLAIAFGLINTPDG-TRLLITKNLKICDDCHIAIKFISKITER 488
HDV DEK IC HSE+LA+AFGLI P+G + + I KN++IC+DCH +KF S+I R
Sbjct: 612 HDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGR 671
Query: 489 EITVRDVNRYHHFKDGICSCGDYW 512
+I +RD NR+HHF G CSC D W
Sbjct: 672 QIILRDSNRFHHFSTGKCSCNDNW 695
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 181/388 (46%), Gaps = 51/388 (13%)
Query: 5 FHPV---LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNG--------- 52
F P L +L+HLY+ L +A LFD++ +R++F WN L+ AYA +G
Sbjct: 53 FQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATF 112
Query: 53 ---PY-------------------EVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIE 90
P+ + ++EL+ R+ G P +T L A + LS +
Sbjct: 113 DRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLR 172
Query: 91 EGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISA 150
G++IH +I + +VF+ AL DMYAKC + AR +FD + +++ L +IS
Sbjct: 173 YGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNL--MISG 230
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVK-----TALVDMYAKCGLVKVARNLFEQLREK 205
A G+ H+ L+ + + ++ Y +CG V AR +F + +EK
Sbjct: 231 YA-----KNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEK 285
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF 264
+V W AM+ GYA +G AL LF +M E ++PD T V+S+C++ G+
Sbjct: 286 DIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVH 345
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+ ++ ++ + ++D+ G +D+A + M + + W A++ C +GH
Sbjct: 346 GKSIL-AGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTR-NVVSWNAMIVGCAQNGH 403
Query: 325 VKLAELALEKLIE--LEPHDAGNYVILS 350
K A E +++ +P + ILS
Sbjct: 404 DKDALELFENMLQQKFKPDNVTFIGILS 431
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 114/248 (45%), Gaps = 24/248 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + ++++ L+ +YS C + +A +F+ +P RN+ WN +I A NG + A+EL+
Sbjct: 352 GLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELF 411
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG-AALIDMYAK 120
+L+ PDN TF L AC + IE+G+ + + T A ++++ +
Sbjct: 412 ENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGR 471
Query: 121 CSCVVNARQVFDKILERDPSE---ATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
+ A + K + DP +TL+++ S DI + RH FEL+
Sbjct: 472 TGRIEQAVALI-KNMAHDPDFLIWSTLLSICSTKGDIVNAE-------VAARHLFELDPT 523
Query: 178 VKTA---LVDMYAKCGL---VKVARNLFEQLREKRVVSWNAMITGYAMHGHST------K 225
+ L +MYA G V RNL + K+ ++ + +H ++ +
Sbjct: 524 IAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPE 583
Query: 226 ALDLFEKM 233
+ D++EK+
Sbjct: 584 SEDIYEKL 591
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/577 (36%), Positives = 326/577 (56%), Gaps = 68/577 (11%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF P V+ +L+ +Y+ C L +A ++FD +P R+L WNV++ YA G E A +L+
Sbjct: 115 GFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLF 174
Query: 62 YRLLE----------IGLV----------------------PDNFTFPFALKACSALSAI 89
+ E G V P+ FT A+ A +A+ I
Sbjct: 175 DEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCI 234
Query: 90 EEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----------- 138
G+ IH ++R ++D + ++L+DMY KC C+ AR +FDKI+E+D
Sbjct: 235 RRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRY 294
Query: 139 ----------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
P+E T V++A AD+ G+++HG+ R F+
Sbjct: 295 FKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYS 354
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KD 235
++LVDMY KCG ++ A+++ + + +VSW ++I G A +G +AL F+ + K
Sbjct: 355 FASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKS 414
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
+PDH+TFV VLSAC+ GL ++G FF S+ + + + HYTC+VDLL SGR ++
Sbjct: 415 GTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQ 474
Query: 296 ACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYAR 355
+I +M +KP +W ++L C +G++ LAE A ++L ++EP + YV ++NIYA
Sbjct: 475 LKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAA 534
Query: 356 AANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGR 415
A WE K+RK M + G+ K SW E+K K H F++ D SHP ++I L+ L +
Sbjct: 535 AGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKK 594
Query: 416 MKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDC 475
MKE GYVP T V HDVE+++K + HSE+LA+AF +++T +GT + + KNL+ C DC
Sbjct: 595 MKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDC 654
Query: 476 HIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
H AIKFIS IT+R+ITVRD R+H F++G CSCGDYW
Sbjct: 655 HGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 135/301 (44%), Gaps = 44/301 (14%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G VL + L+ +Y C C+ A +FD+I ++++ W +I Y + + L+
Sbjct: 248 GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLF 307
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
L+ P+ +TF L AC+ L+ E G+++H + R ++ F ++L+DMY KC
Sbjct: 308 SELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKC 367
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +A+ V D + D P T V V+
Sbjct: 368 GNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVL 427
Query: 149 SASADIAALPQGRE-LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK-R 206
SA + +G E + + +HR T LVD+ A+ G + +++ ++ K
Sbjct: 428 SACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPS 487
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE---VQPDH-ITFVGVLSACSRGGLF-DEGR 261
W +++ G + +G+ +DL E+ E ++P++ +T+V + + + G + +EG+
Sbjct: 488 KFLWASVLGGCSTYGN----IDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGK 543
Query: 262 M 262
M
Sbjct: 544 M 544
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 120/257 (46%), Gaps = 41/257 (15%)
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+LL P T+ ++ CS A+EEG+++HE + + + + + L+ MYAKC
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 123 CVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
+V+AR+VFD++ RD SW +
Sbjct: 135 SLVDARKVFDEMPNRDLC--------------------------SW-----------NVM 157
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK--DEVQPD 240
V+ YA+ GL++ AR LF+++ EK SW AM+TGY +AL L+ M+ +P+
Sbjct: 158 VNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPN 217
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
T ++A + G+ +VR +D ++ ++D+ G G +DEA ++
Sbjct: 218 IFTVSIAVAAAAAVKCIRRGKEIHGHIVR-AGLDSDEVLWSSLMDMYGKCGCIDEARNIF 276
Query: 301 MQMRVKPDPGVWGALLN 317
++ V+ D W ++++
Sbjct: 277 DKI-VEKDVVSWTSMID 292
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 112/239 (46%), Gaps = 14/239 (5%)
Query: 137 RDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
+ P +T +I + AL +G+++H F + + L+ MYAKCG + AR
Sbjct: 81 KKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDAR 140
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGL 256
+F+++ + + SWN M+ GYA G +A LF++M + D ++ +++ +
Sbjct: 141 KVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM---TEKDSYSWTAMVTGYVKKDQ 197
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG-----RLDEACDLIMQMRVKPDPGV 311
+E + + M R + P++ +T + + + R E I++ + D +
Sbjct: 198 PEEALVLYSLMQRVPNSRPNI--FTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVL 255
Query: 312 WGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANW-EGVAKLRKLM 369
W +L++ G + A +K++E D ++ + + Y +++ W EG + +L+
Sbjct: 256 WSSLMDMYGKCGCIDEARNIFDKIVE---KDVVSWTSMIDRYFKSSRWREGFSLFSELV 311
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + ++ LV +Y+ C + +A + D P+ +L W LI A NG + A++
Sbjct: 348 VGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKY 407
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ LL+ G PD+ TF L AC+ +E+G
Sbjct: 408 FDLLLKSGTKPDHVTFVNVLSACTHAGLVEKG 439
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/528 (40%), Positives = 319/528 (60%), Gaps = 41/528 (7%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL--EIGLVPDNFTFPFALKA 82
+A + FD IP N + + Y N ++EL+ ++ + V D A A
Sbjct: 2 DARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSA 61
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC--VVNARQVFDKILERD-- 138
+ + +H + + +E + V ++D YAK + AR+VFD +ERD
Sbjct: 62 SARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDT-MERDVV 120
Query: 139 --------------PSEA-------------------TLVTVISASADIAALPQGRELHG 165
+EA L V+ A A A+ G+ +H
Sbjct: 121 SWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHN 180
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
R E NV V T++VDMY+KCG V++A F +++EK ++SW+AMITGY MHG +
Sbjct: 181 QVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQE 240
Query: 226 ALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMV 284
AL++F +MK ++P++ITF+ VL+ACS GL DEGR ++ +M +++ I+ V+HY CMV
Sbjct: 241 ALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMV 300
Query: 285 DLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAG 344
DLLG +G LDEA LI +M+VKPD +WGALL++C++H +V+LAE+++++L EL+ ++G
Sbjct: 301 DLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSG 360
Query: 345 NYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDE 404
YV+LSNIYA A W+ V ++R L+ R I+K S E+K K + F GD SHP E
Sbjct: 361 YYVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIE 420
Query: 405 IYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLL 464
IY+ L+ L RM+EAGYVP T SV HD++ +EK + + HSE+LA+AF L+N+ + +
Sbjct: 421 IYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIH 480
Query: 465 ITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I KNL++C DCH A+KFI+KITEREI +RD+ R+HHFKDG+CSC DYW
Sbjct: 481 IIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 528
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 150/323 (46%), Gaps = 38/323 (11%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG--LVPDNFTFPFAL 80
L A ++FD + +R++ WN +I YA NG AI LY ++L +G + + L
Sbjct: 105 LEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVL 163
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPS 140
AC+ AI+ G+ IH V+R E +V+VG +++DMY+KC V A + F KI E++
Sbjct: 164 LACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKN-- 221
Query: 141 EATLVTVISASADIAAL---PQGRE-LHGFSWRHRFELNVKVKTALVDMYAKC---GLVK 193
++S SA I +G+E L F+ R L T + + A C GL+
Sbjct: 222 ------ILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYIT-FISVLAACSHAGLLD 274
Query: 194 VARNLFEQLR-----EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVL 248
R + ++ E V + M+ G +A L ++MK V+PD + +L
Sbjct: 275 EGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMK--VKPDAAIWGALL 332
Query: 249 SACSRGGLFDEGRMFFESMVRDYHIDPSVQ-HYTCMVDLLGHSGR---LDEACDLIMQMR 304
SAC + M S+ R + +D S +Y + ++ +G ++ L+ R
Sbjct: 333 SACRIHKNVELAEM---SVKRLFELDASNSGYYVLLSNIYAEAGMWKDVERIRLLVKTRR 389
Query: 305 VKPDPGVWGALLNSCKLHGHVKL 327
++ PG +S +L G + L
Sbjct: 390 IEKPPG-----YSSFELKGKIYL 407
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 15/214 (7%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG + + T +V +YS C + A + F +I ++N+ W+ +I Y +G + A+E+
Sbjct: 185 MGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEI 244
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG----AALID 116
+ + GL P+ TF L ACS ++EGR + + K E + G ++D
Sbjct: 245 FTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAM---KQEFGIEAGVEHYGCMVD 301
Query: 117 MYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL-- 174
+ + C+ A + K ++ P A ++SA + + EL S + FEL
Sbjct: 302 LLGRAGCLDEAYSLI-KEMKVKPDAAIWGALLSA----CRIHKNVELAEMSVKRLFELDA 356
Query: 175 -NVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
N L ++YA+ G+ K + ++ +R+
Sbjct: 357 SNSGYYVLLSNIYAEAGMWKDVERIRLLVKTRRI 390
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/543 (41%), Positives = 309/543 (56%), Gaps = 50/543 (9%)
Query: 2 GFGFHPVLATKLVHL--YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIE 59
G F P A++L+ S L A Q+FD+IP NL+ WN LIRAYA + ++
Sbjct: 62 GLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLL 121
Query: 60 LYYRLL-EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
++ R+L + PD FTFPF +KA S L + G+ H VI+ +DVF+ +LI Y
Sbjct: 122 IFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFY 181
Query: 119 AKCSCVVNARQVFDKILERD----------------PSEA-----------------TLV 145
AKC + +VF RD P EA T+V
Sbjct: 182 AKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMV 241
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
V+SA A + GR +H + R+R ++ + A++DMY KCG V+ A+ LF+++ EK
Sbjct: 242 GVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEK 301
Query: 206 RVVSWNAMITGYA------------MHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACS 252
+VSW M+ GYA MHGH A+ LF KM+ D+V+P+ +TF +L ACS
Sbjct: 302 DIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACS 361
Query: 253 RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
GL +EGR FF M Y + P V+HY CMVD+LG +G L+EA +LI +M + P VW
Sbjct: 362 HVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVW 421
Query: 313 GALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDR 372
GALL +C +H +V LAE A +LIELEP + G YV+LSNIYA+A W+ V+ LRKLM D
Sbjct: 422 GALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDV 481
Query: 373 GIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDV 432
G+KK CS IEV H FL GD SHP+ +IYAKL + R++ GYVP + V
Sbjct: 482 GLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLV 541
Query: 433 -ENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREIT 491
E D K + HSE+LAIAFGLI+T + I KNL++C DCH K +SK+ +REI
Sbjct: 542 EEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREIL 601
Query: 492 VRD 494
+RD
Sbjct: 602 LRD 604
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 149/314 (47%), Gaps = 30/314 (9%)
Query: 59 ELYYRLLEIGLVPDNFTFP--FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
+++ ++L GL D F+ A S +++ +++ + + +++ LI
Sbjct: 53 QIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPH----PNLYTWNTLIR 108
Query: 117 MYAKCSCVVNARQVFDKILERDPS---EATLVTVISASADIAALPQGRELHGFSWRHRFE 173
YA S + +F ++L + P + T +I A++++ L G+ HG +
Sbjct: 109 AYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLG 168
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
+V + +L+ YAKCG + + +F + VVSWN+MIT + G +AL+LF++M
Sbjct: 169 SDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEM 228
Query: 234 KDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGR 292
+ + V+P+ IT VGVLSAC++ F+ GR + S + I S+ M+D+ G
Sbjct: 229 ETQNVKPNGITMVGVLSACAKKSDFEFGR-WVHSYIERNRIXESLTLSNAMLDMYTKCGS 287
Query: 293 LDEACDLIMQMRVKPDPGVWGALL------------NSCKLHGHVKLAELALEKLIE--L 338
+++A L +M K D W +L +HGH K A K+ E +
Sbjct: 288 VEDAKRLFDKMPEK-DIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKV 346
Query: 339 EPHDAGNYVILSNI 352
+P N V +NI
Sbjct: 347 KP----NAVTFTNI 356
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/541 (39%), Positives = 310/541 (57%), Gaps = 45/541 (8%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V T ++ Y L A LFD +P+RN+ W +I Y N ++A +L E+
Sbjct: 254 VTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIA----RKLFEV 309
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYAKCSCVVN 126
+ ++ LK + ++E + + I++ V A+I + + V
Sbjct: 310 MPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKS-----VVACNAMILCFGQNGEVPK 364
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISASAD 153
ARQVFD++ E+D P+ +L++V+S A
Sbjct: 365 ARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAG 424
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+A L GRE+H R +F+L+V V + L+ MY KCG + A+ +F++ K VV WN++
Sbjct: 425 LANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSI 484
Query: 214 ITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
ITGYA HG +AL +F M + PD +TFVGVLSACS G +G F SM Y
Sbjct: 485 ITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQ 544
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
++ ++HY CMVDLLG +G+L+EA DLI +M ++ D +WGALL +C+ H + LAE+A
Sbjct: 545 VEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAA 604
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
+KL+ LEP +AG +++LSNIYA W+ VA+LR+ M DR + K CSWI V+ K H F
Sbjct: 605 KKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKF 664
Query: 393 LSGDAS-HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIA 451
GD+S HP EI L+WL G ++EAGY P V HDV+ +EK + HSE+LA+A
Sbjct: 665 TGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVA 724
Query: 452 FGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
+GL+ P G + + KNL++C DCH AIK I+K+T REI +RD NR+HHFKDG CSC DY
Sbjct: 725 YGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDY 784
Query: 512 W 512
W
Sbjct: 785 W 785
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 154/337 (45%), Gaps = 36/337 (10%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
LV Y ++ A ++FDR+P+RN+ W ++R Y G A L++++ E +V
Sbjct: 166 LVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVV-- 223
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
++ L I+E R+ + + E DV +I Y + +V AR +FD
Sbjct: 224 --SWTVMLGGLLQEGRIDEACRLFDMMP----EKDVVTRTNMIGGYCQVGRLVEARMLFD 277
Query: 133 KILERD-PSEATLVT--VISASADIA-----ALPQGRE------LHGFSWRHRFE----- 173
++ R+ S T++T V + DIA +P+ E L G++ R +
Sbjct: 278 EMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASEL 337
Query: 174 ------LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKAL 227
+V A++ + + G V AR +F+Q+REK +W+AMI Y G AL
Sbjct: 338 FNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDAL 397
Query: 228 DLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDL 286
+LF M+ E ++P+ + + VLS C+ D GR +VR D V + ++ +
Sbjct: 398 ELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRS-QFDLDVYVASVLLSM 456
Query: 287 LGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
G L +A + + VK D +W +++ HG
Sbjct: 457 YIKCGNLAKAKQVFDRFAVK-DVVMWNSIITGYAQHG 492
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 143/331 (43%), Gaps = 28/331 (8%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
L+ YS + A +FD + +N+ WN ++ Y N + A ++ ++ E +
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTI 161
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
N + I E R + + + E +V A++ Y K + A +
Sbjct: 162 SWNGLVSGYINN----GMINEAREVFDRMP----ERNVVSWTAMVRGYVKEGMISEAETL 213
Query: 131 FDKILERDPSEATLVTVISASADIAALPQ-GRELHGFSWRHRF-ELNVKVKTALVDMYAK 188
F ++ E++ V+S + + L Q GR E +V +T ++ Y +
Sbjct: 214 FWQMPEKN--------VVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQ 265
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVL 248
G + AR LF+++ + VVSW MITGY + A LFE M ++ + +++ +L
Sbjct: 266 VGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEK---NEVSWTAML 322
Query: 249 SACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPD 308
+ G DE F +M SV M+ G +G + +A + QMR K D
Sbjct: 323 KGYTNCGRLDEASELFNAMP-----IKSVVACNAMILCFGQNGEVPKARQVFDQMREK-D 376
Query: 309 PGVWGALLNSCKLHGHVKLAELALEKLIELE 339
G W A++ + G ++L L L ++++ E
Sbjct: 377 EGTWSAMIKVYERKG-LELDALELFRMMQRE 406
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 137/318 (43%), Gaps = 43/318 (13%)
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEAT 143
S L IE+ R + D +R+K ++ +++ Y + A+ +FDK+ ER+ +
Sbjct: 109 SRLGQIEKARVVF-DEMRDK---NIISWNSIVAGYFQNKRPQEAQNMFDKMSERNT--IS 162
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
++S + + + RE+ + E NV TA+V Y K G++ A LF Q+
Sbjct: 163 WNGLVSGYINNGMINEAREV----FDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMP 218
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMF 263
EK VVSW M+ G G +A LF+ M ++ D +T ++ + G E RM
Sbjct: 219 EKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEK---DVVTRTNMIGGYCQVGRLVEARML 275
Query: 264 FESM---------------VRDYHIDPSVQ-----------HYTCMVDLLGHSGRLDEAC 297
F+ M V++ +D + + +T M+ + GRLDEA
Sbjct: 276 FDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEAS 335
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAA 357
+L M +K A++ +G V A +++ E D G + + +Y R
Sbjct: 336 ELFNAMPIKSVVAC-NAMILCFGQNGEVPKARQVFDQMRE---KDEGTWSAMIKVYERKG 391
Query: 358 NWEGVAKLRKLMIDRGIK 375
+L ++M GI+
Sbjct: 392 LELDALELFRMMQREGIR 409
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ 238
+ +L+ Y++ G ++ AR +F+++R+K ++SWN+++ GY + +A ++F+KM +
Sbjct: 101 RNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER-- 158
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
+ I++ G++S G+ +E R F+ M + +V +T MV G + EA
Sbjct: 159 -NTISWNGLVSGYINNGMINEAREVFDRMP-----ERNVVSWTAMVRGYVKEGMISEAET 212
Query: 299 LIMQMRVKPDPGV--W----GALLNSCKLHGHVKLAELALEKLIELEPHDAGNY 346
L QM P+ V W G LL ++ +L ++ EK + + G Y
Sbjct: 213 LFWQM---PEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGY 263
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F +A+ L+ +Y C L A Q+FDR +++ +WN +I YA +G A+ +++
Sbjct: 443 FDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFH 502
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYAKC 121
+ G++PD+ TF L ACS +++G I + + + E + A ++D+ +
Sbjct: 503 DMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRA 562
Query: 122 SCVVNARQVFDKILERDPSEATLV 145
+ A + +K+ P EA +
Sbjct: 563 GKLNEAMDLIEKM----PMEADAI 582
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/577 (36%), Positives = 321/577 (55%), Gaps = 65/577 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + + L+HLYS + A +FDR + ++ WNV+I Y + ++ +++L
Sbjct: 148 LGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKL 207
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + + ++P + T L ACS L + G+R+H V K E + ALIDMYA
Sbjct: 208 FDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAA 267
Query: 121 C---------------------SCVVN----------ARQVFDKILERD----------- 138
C + +V AR FDK+ ERD
Sbjct: 268 CGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGY 327
Query: 139 ----------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
P E T+V++++A A + AL G + + ++ +++
Sbjct: 328 LQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDS 387
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KD 235
V AL+DMY CG V+ A +F + + +SW A+I G A++G+ +ALD+F +M K
Sbjct: 388 FVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKA 447
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
+ PD +T +GVL AC+ G+ D+G+ FF M + I+P+V HY CMVDLLG +G L E
Sbjct: 448 SITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKE 507
Query: 296 ACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYAR 355
A ++I M VKP+ VWG+LL +C++H ++AE+A ++++ELEP + YV+L NIYA
Sbjct: 508 AHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAA 567
Query: 356 AANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGR 415
WE + ++RKLM+DRGIKK+ CS IE+ H F++GD HP EIY+KL +
Sbjct: 568 CNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVD 627
Query: 416 MKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDC 475
+K AGY P T VF D+ +EK + + HSE+LAIAFGLI++ G + I KNL++C DC
Sbjct: 628 LKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRIVKNLRMCVDC 687
Query: 476 HIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
H K +SK+ RE+ VRD R+HHF+ G CSC DYW
Sbjct: 688 HYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 194/445 (43%), Gaps = 102/445 (22%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +FD +P N F+WN +I+ Y+ G A+ +Y +LE G++PD +T+PF LK +
Sbjct: 72 ARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTR 131
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
+A++ GR +H+ +++ + ++VFV ALI +Y+ V AR VFD+ + D
Sbjct: 132 DTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVM 191
Query: 139 --------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
PS TLV+V+SA + + L G+ +H + +
Sbjct: 192 ISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKI 251
Query: 173 ELNVKVKTALVDMYAKC-------------------------------GLVKVARNLFEQ 201
E ++ AL+DMYA C G V +ARN F++
Sbjct: 252 EPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDK 311
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEG 260
+ E+ VSW AMI GY + L LF +M+ ++PD T V +L+AC+ G + G
Sbjct: 312 MPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELG 371
Query: 261 R-----------------------MFF-----ESMVRDYHIDPSVQH--YTCMVDLLGHS 290
M+F E +R ++ P +T ++ L +
Sbjct: 372 EWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAIN 431
Query: 291 GRLDEACDLIMQM---RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE---LEPHDAG 344
G +EA D+ QM + PD +L +C G V + ++ +EP +
Sbjct: 432 GYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEP-NVA 490
Query: 345 NYVILSNIYARAANWEGVAKLRKLM 369
+Y + ++ RA + + ++ K M
Sbjct: 491 HYGCMVDLLGRAGHLKEAHEVIKNM 515
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/541 (39%), Positives = 311/541 (57%), Gaps = 45/541 (8%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V T ++ Y L A LFD +P+RN+ W +I Y N ++A +L+ E+
Sbjct: 254 VTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLF----EV 309
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYAKCSCVVN 126
+ ++ LK + ++E + + I++ V A+I + + V
Sbjct: 310 MPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKS-----VVACNAMILCFGQNGEVPK 364
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISASAD 153
ARQVFD++ E+D P+ +L++V+S A
Sbjct: 365 ARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAG 424
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+A L GRE+H R +F+L+V V + L+ MY KCG + A+ +F++ K VV WN++
Sbjct: 425 LANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSI 484
Query: 214 ITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
ITGYA HG +AL +F M + PD +TFVGVLSACS G +G F SM Y
Sbjct: 485 ITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQ 544
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
++ ++HY CMVDLLG +G+L+EA DLI +M ++ D +WGALL +C+ H + LAE+A
Sbjct: 545 VEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAA 604
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
+KL+ LEP +AG +++LSNIYA W+ VA+LR+ M DR + K CSWI V+ K H F
Sbjct: 605 KKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKF 664
Query: 393 LSGDAS-HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIA 451
GD+S HP EI L+WL G ++EAGY P V HDV+ +EK + HSE+LA+A
Sbjct: 665 TGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVA 724
Query: 452 FGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
+GL+ P G + + KNL++C DCH AIK I+K+T REI +RD NR+HHFKDG CSC DY
Sbjct: 725 YGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDY 784
Query: 512 W 512
W
Sbjct: 785 W 785
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 154/337 (45%), Gaps = 36/337 (10%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
LV Y ++ A ++FDR+P+RN+ W ++R Y G A L++++ E +V
Sbjct: 166 LVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVV-- 223
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
++ L I+E R+ + + E DV +I Y + +V AR +FD
Sbjct: 224 --SWTVMLGGLLQEGRIDEACRLFDMMP----EKDVVTRTNMIGGYCQVGRLVEARMLFD 277
Query: 133 KILERD-PSEATLVT--VISASADIA-----ALPQGRE------LHGFSWRHRFE----- 173
++ R+ S T++T V + DIA +P+ E L G++ R +
Sbjct: 278 EMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASEL 337
Query: 174 ------LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKAL 227
+V A++ + + G V AR +F+Q+REK +W+AMI Y G AL
Sbjct: 338 FNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDAL 397
Query: 228 DLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDL 286
+LF M+ E ++P+ + + VLS C+ D GR +VR D V + ++ +
Sbjct: 398 ELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRS-QFDLDVYVASVLLSM 456
Query: 287 LGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
G L +A + + VK D +W +++ HG
Sbjct: 457 YIKCGNLAKAKQVFDRFAVK-DVVMWNSIITGYAQHG 492
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 143/331 (43%), Gaps = 28/331 (8%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
L+ YS + A +FD + +N+ WN ++ Y N + A ++ ++ E +
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTI 161
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
N + I E R + + + E +V A++ Y K + A +
Sbjct: 162 SWNGLVSGYINN----GMINEAREVFDRMP----ERNVVSWTAMVRGYVKEGMISEAETL 213
Query: 131 FDKILERDPSEATLVTVISASADIAALPQ-GRELHGFSWRHRF-ELNVKVKTALVDMYAK 188
F ++ E++ V+S + + L Q GR E +V +T ++ Y +
Sbjct: 214 FWQMPEKN--------VVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQ 265
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVL 248
G + AR LF+++ + VVSW MITGY + A LFE M ++ + +++ +L
Sbjct: 266 VGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEK---NEVSWTAML 322
Query: 249 SACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPD 308
+ G DE F +M SV M+ G +G + +A + QMR K D
Sbjct: 323 KGYTNCGRLDEASELFNAMP-----IKSVVACNAMILCFGQNGEVPKARQVFDQMREK-D 376
Query: 309 PGVWGALLNSCKLHGHVKLAELALEKLIELE 339
G W A++ + G ++L L L ++++ E
Sbjct: 377 EGTWSAMIKVYERKG-LELDALELFRMMQRE 406
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 137/318 (43%), Gaps = 43/318 (13%)
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEAT 143
S L IE+ R + D +R+K ++ +++ Y + A+ +FDK+ ER+ +
Sbjct: 109 SRLGQIEKARVVF-DEMRDK---NIISWNSIVAGYFQNKRPQEAQNMFDKMSERNT--IS 162
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
++S + + + RE+ + E NV TA+V Y K G++ A LF Q+
Sbjct: 163 WNGLVSGYINNGMINEAREV----FDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMP 218
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMF 263
EK VVSW M+ G G +A LF+ M ++ D +T ++ + G E RM
Sbjct: 219 EKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEK---DVVTRTNMIGGYCQVGRLVEARML 275
Query: 264 FESM---------------VRDYHIDPSVQ-----------HYTCMVDLLGHSGRLDEAC 297
F+ M V++ +D + + +T M+ + GRLDEA
Sbjct: 276 FDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEAS 335
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAA 357
+L M +K A++ +G V A +++ E D G + + +Y R
Sbjct: 336 ELFNAMPIKSVVAC-NAMILCFGQNGEVPKARQVFDQMRE---KDEGTWSAMIKVYERKG 391
Query: 358 NWEGVAKLRKLMIDRGIK 375
+L ++M GI+
Sbjct: 392 LELDALELFRMMQREGIR 409
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ 238
+ +L+ Y++ G ++ AR +F+++R+K ++SWN+++ GY + +A ++F+KM +
Sbjct: 101 RNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER-- 158
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
+ I++ G++S G+ +E R F+ M + +V +T MV G + EA
Sbjct: 159 -NTISWNGLVSGYINNGMINEAREVFDRMP-----ERNVVSWTAMVRGYVKEGMISEAET 212
Query: 299 LIMQMRVKPDPGV--W----GALLNSCKLHGHVKLAELALEKLIELEPHDAGNY 346
L QM P+ V W G LL ++ +L ++ EK + + G Y
Sbjct: 213 LFWQM---PEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGY 263
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F +A+ L+ +Y C L A Q+FDR +++ +WN +I YA +G A+ +++
Sbjct: 443 FDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFH 502
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYAKC 121
+ G++PD+ TF L ACS +++G I + + + E + A ++D+ +
Sbjct: 503 DMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRA 562
Query: 122 SCVVNARQVFDKILERDPSEATLV 145
+ A + +K+ P EA +
Sbjct: 563 GKLNEAMDLIEKM----PMEADAI 582
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/514 (39%), Positives = 316/514 (61%), Gaps = 12/514 (2%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G G + + + +Y++ L +A ++F + ++ WN +I Y G E A L+
Sbjct: 162 GIGSDVHIKSAGIQMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKGLF 220
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ V + ++ + + + + R++ +++ E D ++++D Y
Sbjct: 221 AQMP----VKNIGSWNVMINGLAKGGNLGDARKLFDEMS----ERDEISWSSMVDGYISA 272
Query: 122 SCVVNARQVFDKIL--ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
A ++F ++ E P L +V++A ++I A+ QGR +H + R+ +L+ +
Sbjct: 273 GRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLG 332
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQ 238
TAL+DMYAKCG + + +FE+++E+ + +WNAMI G A+HG + AL+LF K+++ ++
Sbjct: 333 TALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMK 392
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
P+ IT VGVL+AC+ G D+G F++M Y +DP ++HY CMVDLLG SG EA D
Sbjct: 393 PNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAED 452
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN 358
LI M +KP+ VWGALL +C++HG+ LAE + L+ELEP ++G YV+LSNIYA+
Sbjct: 453 LINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGR 512
Query: 359 WEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKE 418
++ V+K+RKLM +RGIK S +++ H F GD SHP EIY KLK ++ R++
Sbjct: 513 FDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQM 572
Query: 419 AGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIA 478
AG+ P T V D++ +EK + HSE+LAIAFGLINT G R+ I KNL++CDDCH A
Sbjct: 573 AGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSA 632
Query: 479 IKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
K IS+I +REI VRD RYHHFK+G CSC D+W
Sbjct: 633 TKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 163/318 (51%), Gaps = 20/318 (6%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A ++F IP N+F+WN++I+ N AI Y R++ I P+ FT+P KACS
Sbjct: 86 ALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSV 144
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLV 145
A++EGR+IH V+++ +DV + +A I MYA + +AR++F E+ +V
Sbjct: 145 AQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYS------GESDVV 198
Query: 146 ---TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T+I L + L + N+ +++ AK G + AR LF+++
Sbjct: 199 CWNTMIDGYLKCGVLEAAKGL----FAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEM 254
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGR 261
E+ +SW++M+ GY G +AL++F++M ++E +P VL+ACS G D+GR
Sbjct: 255 SERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGR 314
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
+ R+ I T ++D+ GRLD ++ +M+ + + W A++ +
Sbjct: 315 WVHAYLKRN-SIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKER-EIFTWNAMIGGLAI 372
Query: 322 HGHVKLAELALEKLIELE 339
HG AE ALE +L+
Sbjct: 373 HGR---AEDALELFSKLQ 387
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/523 (38%), Positives = 309/523 (59%), Gaps = 36/523 (6%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
+ Q+F +I + + +NV+IRAY+ + E LY + G+ P+ + F +K+C
Sbjct: 121 SSQVFSQIMKPSGSQYNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIR 180
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
+S++ G +IH ++R+ ++D + L+D+Y+ C A +VFD+I + D
Sbjct: 181 ISSLMGGLQIHARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVL 240
Query: 139 ----------------------------PSEATLVTVISASADIAALPQGRELHGFSWRH 170
P + T + ++ A A++ AL G +H + H
Sbjct: 241 ISCCIHNRRTRDALRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEH 300
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
++ + + +L+ MY++CG ++ A ++F+++ E+ VVSW+AMI+G+AMHG+ +A++ F
Sbjct: 301 GYDGALNLCNSLITMYSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAF 360
Query: 231 EKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGH 289
E+M+ V PD T GVLSACS GL D+G MFF+ M + + I+P++ HY CMVDLLG
Sbjct: 361 EQMQQLGVSPDDQTLTGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGR 420
Query: 290 SGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVIL 349
+G LD+A LIM M +KPD +W LL +C++H H L E + LIEL+ +AG+YV+L
Sbjct: 421 AGLLDQAYQLIMSMVIKPDSTLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGDYVLL 480
Query: 350 SNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKL 409
NIY+ NW+ V LRK M ++GI+ S CS IE+K K H F+ D HP DEIY L
Sbjct: 481 LNIYSSVGNWDKVTDLRKFMKEKGIQTSPGCSTIELKGKVHEFVVDDILHPRTDEIYEML 540
Query: 410 KWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNL 469
+ ++K AGYV S H++ +EK N + HSE+LAIAFG++ TP GT + + KNL
Sbjct: 541 DEIGKQLKIAGYVAELSSELHNLGAEEKGNRLSYHSEKLAIAFGVLATPPGTTIRVAKNL 600
Query: 470 KICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+IC DCH K +S RE+ +RD R+HHF++G CSC YW
Sbjct: 601 RICVDCHNFAKVLSGAYNREVVIRDRTRFHHFREGQCSCNGYW 643
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+ +YS C L A+ +F R+ +RN+ W+ +I +A +G AIE + ++ ++G
Sbjct: 308 LCNSLITMYSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLG 367
Query: 69 LVPDNFTFPFALKACSALSAIEEG 92
+ PD+ T L ACS +++G
Sbjct: 368 VSPDDQTLTGVLSACSHCGLVDDG 391
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/544 (39%), Positives = 313/544 (57%), Gaps = 40/544 (7%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQ-RNLFL-WNVLIRAYAWNGPYEVAIELYY 62
P + T L+ +Y C + NA +LFD PQ R L + +N L+ YA N + + L+
Sbjct: 43 LEPFVQTSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFC 102
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+ E+G+ + T ++ C + G +H ++ + D VG L+ MY K
Sbjct: 103 EMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSG 162
Query: 123 CVVNARQVFDKILERD---------------------------------PSEATLVTVIS 149
+ R++FD++ + P TLV V+S
Sbjct: 163 EIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLS 222
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
+ A + AL G+E+ F N + ALV+MYA+CG +K AR++F+ + K VVS
Sbjct: 223 SCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVS 282
Query: 210 WNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
W A+I GY MHG A+ LF++M + ++PD FV VLSACS GL ++G +F M
Sbjct: 283 WTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVME 342
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
R Y + P +HY+CMVDLLG +GRL+EA +LI M+V+ D +WGALL +CK+H +V+LA
Sbjct: 343 RKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELA 402
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
ELA E++IELEP + G YV+LSN+Y A N EG+ ++R LM R +KK CS++E K +
Sbjct: 403 ELAFEQVIELEPTNTGYYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGR 462
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
H F +GD +HP +EIY KL LE +K+ + G + H+ +E N + HSE+L
Sbjct: 463 VHLFFAGDRNHPQTNEIYKKLNELENLVKD---LDGCKKNDHE-RREEYLNSMGVHSEKL 518
Query: 449 AIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
A+AF L+NT T ++I KNL+IC DCH+ IK +SKI +R+ VRD R+HHFK+G CSC
Sbjct: 519 AVAFALLNTRKETEIIIIKNLRICGDCHLFIKLVSKIVDRQFVVRDATRFHHFKNGFCSC 578
Query: 509 GDYW 512
+YW
Sbjct: 579 KEYW 582
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 154/325 (47%), Gaps = 40/325 (12%)
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
+L G P+ FTFPFA+K+C+ALS G+++H V + + FV +LI MY KCS
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 124 VVNARQVFD-----------------------------------KILERDPSEATLVTVI 148
+ NAR++FD + L + + T++ ++
Sbjct: 61 IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
L G +HGF + +++ V L+ MY K G + R LF+++ K ++
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLI 180
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WNAMI GYA +G + L+L+++M+ + PD +T VGVLS+C+ G G+ E
Sbjct: 181 TWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKE-VERK 239
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ + + +V++ G L +A D+ M VK W A++ +HG ++
Sbjct: 240 MEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVS-WTAIIGGYGMHGQGEV 298
Query: 328 AELALEKLIE--LEPHDAGNYVILS 350
A +++I ++P +LS
Sbjct: 299 AVGLFDEMIRGGIKPDGTAFVSVLS 323
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 2 GFGF--HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIE 59
GFGF +P L LV++Y+ C L A +FD +P +++ W +I Y +G EVA+
Sbjct: 242 GFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVG 301
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
L+ ++ G+ PD F L ACS +G
Sbjct: 302 LFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKG 334
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/547 (38%), Positives = 319/547 (58%), Gaps = 42/547 (7%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIP-QRNLFLWNVLIRAYAWNGPYEVAIEL 60
GFH + T ++ YS C L +A +F +P +N+ W +I N +A L
Sbjct: 332 GFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAAL 391
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+ E + P+ FT+ L A + + IH +I+ ++ VG AL+ Y+K
Sbjct: 392 FSRMREDNVKPNEFTYSTVLTASIPILLPQ----IHAQIIKTNYQHAPSVGTALLASYSK 447
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
A +F I +D P+E T+ +
Sbjct: 448 LGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSA 507
Query: 148 ISASAD-IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
I A A A + QGR+ H S ++R++ + V +ALV MYA+ G + AR +FE+ ++
Sbjct: 508 IDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRD 567
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+VSWN+MI+GYA HG+S +ALD F +M+ ++ D TF+ V+ C+ GL EG+ +F+
Sbjct: 568 LVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFD 627
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
SMV D++I P+++HY+CMVDL +G+LDE +LI M VW LL +C++H +V
Sbjct: 628 SMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNV 687
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+L +LA +KL+ LEP D+ YV+LSNIYA A W+ ++RKLM + +KK CSWI++
Sbjct: 688 ELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQI 747
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
KNK H+F++ D SHP ++IYAKLK + R+K+ GY P T V HD+ ++K M+ HS
Sbjct: 748 KNKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQEGYCPNTSVVLHDIAEEQKETMLVMHS 807
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
ERLA+AFGLI TP T L I KNL++C DCH+ +K +S I +REI +RD +R+HHF G
Sbjct: 808 ERLALAFGLIATPPRTPLQIVKNLRVCGDCHMVMKMVSLIEDREIIMRDCSRFHHFNAGA 867
Query: 506 CSCGDYW 512
CSCGD+W
Sbjct: 868 CSCGDFW 874
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 179/395 (45%), Gaps = 42/395 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T LV +Y C + + +F+ +P+RN+ W L+ Y + L++R+ G
Sbjct: 137 VGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEG 196
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P+ FTF L A ++ A++ GRR+H ++ + VFV +LI+MY+KC V A+
Sbjct: 197 VWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAK 256
Query: 129 QVFDKILERDP---------------------------------SEATLVTVISASADIA 155
VF ++ RD S++T TVI A++
Sbjct: 257 AVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLK 316
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-EKRVVSWNAMI 214
L R+LH +H F + V TA++D Y+KCG + A N+F + + VVSW AMI
Sbjct: 317 QLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMI 376
Query: 215 TGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
G + A LF +M+ D V+P+ T+ VL+A S L + + + + +Y
Sbjct: 377 GGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTA-SIPILLPQ--IHAQIIKTNYQH 433
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
PSV T ++ G +EA I +M D W A+L+ G A
Sbjct: 434 APSVG--TALLASYSKLGNTEEALS-IFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFI 490
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKL 368
K+ ++ + I S I A A+ G+ + R+
Sbjct: 491 KM-SMQGMKPNEFTISSAIDACASPTAGIDQGRQF 524
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 141/309 (45%), Gaps = 40/309 (12%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWE-TDVFVGAALIDMYAKCSCVVNARQVFDKILERD 138
LK C + G ++H ++ ++ +V VG AL+DMY KC V + R VF+ + +R+
Sbjct: 106 LKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRN 165
Query: 139 ---------------------------------PSEATLVTVISASADIAALPQGRELHG 165
P+ T +V+SA A A+ GR +H
Sbjct: 166 VVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHA 225
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
S + V V +L++MY+KCGLV+ A+ +F Q+ + +VSWN ++ G ++ H +
Sbjct: 226 QSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLE 285
Query: 226 ALDLFEKMKDEV-QPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCM 283
AL LF + + + T+ V+ C+ R +++ +H D +V T +
Sbjct: 286 ALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVM--TAI 343
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPH 341
+D G LD+A ++ + M + W A++ C + + LA ++ E ++P+
Sbjct: 344 MDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPN 403
Query: 342 DAGNYVILS 350
+ +L+
Sbjct: 404 EFTYSTVLT 412
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/504 (40%), Positives = 304/504 (60%), Gaps = 8/504 (1%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L +Y+ C + A LFD + ++NL WN++I YA NG E I L +++ G +PD
Sbjct: 196 LTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPD 255
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
T + A ++E RR+ + E D+ A++ YAK +A +F+
Sbjct: 256 QVTMSTIIAAYCQCGRVDEARRVFSEFK----EKDIVCWTAMMVGYAKNGREEDALLLFN 311
Query: 133 KILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCG 190
++L +P TL +V+S+ A +A+L G+ +HG S N+ V +AL+DMY+KCG
Sbjct: 312 EMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCG 371
Query: 191 LVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLS 249
+ AR++F + + VVSWNAMI G A +GH AL+LFE M + + +PD++TF+G+LS
Sbjct: 372 FIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILS 431
Query: 250 ACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
AC ++G+ +F+S+ + + P++ HY CMV+LLG +GR+++A LI M PD
Sbjct: 432 ACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDF 491
Query: 310 GVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLM 369
+W LL+ C G + AE+A L EL+P A Y++LSN+YA W+ VA +R LM
Sbjct: 492 LIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLM 551
Query: 370 IDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVF 429
+ +KK SWIE+ N+ H F S D +HP ++IY KL L G+++E G+ P T V
Sbjct: 552 KSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVL 611
Query: 430 HDVENDEKANMICCHSERLAIAFGLINTPDG-TRLLITKNLKICDDCHIAIKFISKITER 488
HDV DEK IC HSE+LA+AFGLI P+G + + I KN++IC+DCH +KF S+I R
Sbjct: 612 HDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGR 671
Query: 489 EITVRDVNRYHHFKDGICSCGDYW 512
+I +RD NR+HHF G CSC D W
Sbjct: 672 QIILRDSNRFHHFSTGKCSCNDNW 695
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 179/388 (46%), Gaps = 51/388 (13%)
Query: 5 FHPV---LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNG--------- 52
F P L +L+HLY+ L +A LFD++ +R+ F WN L+ AYA +G
Sbjct: 53 FQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATF 112
Query: 53 ---PY-------------------EVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIE 90
P+ + ++EL+ R+ G P +T L A + L +
Sbjct: 113 DRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLR 172
Query: 91 EGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISA 150
G++IH +I + +VF+ AL DMYAKC + AR +FD + +++ L +IS
Sbjct: 173 YGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNL--MISG 230
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVK-----TALVDMYAKCGLVKVARNLFEQLREK 205
A G+ H+ L+ + + ++ Y +CG V AR +F + +EK
Sbjct: 231 YA-----KNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEK 285
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF 264
+V W AM+ GYA +G AL LF +M E ++PD T V+S+C++ G+
Sbjct: 286 DIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVH 345
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+ ++ ++ + ++D+ G +D+A + M + + W A++ C +GH
Sbjct: 346 GKSIL-AGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTR-NVVSWNAMIVGCAQNGH 403
Query: 325 VKLAELALEKLIE--LEPHDAGNYVILS 350
K A E +++ +P + ILS
Sbjct: 404 DKDALELFENMLQQKFKPDNVTFIGILS 431
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 114/248 (45%), Gaps = 24/248 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + ++++ L+ +YS C + +A +F+ +P RN+ WN +I A NG + A+EL+
Sbjct: 352 GLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELF 411
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG-AALIDMYAK 120
+L+ PDN TF L AC + IE+G+ + + T A ++++ +
Sbjct: 412 ENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGR 471
Query: 121 CSCVVNARQVFDKILERDPSE---ATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
+ A + K + DP +TL+++ S DI + RH FEL+
Sbjct: 472 TGRIEQAVALI-KNMAHDPDFLIWSTLLSICSTKGDIVNAE-------VAARHLFELDPT 523
Query: 178 VKTA---LVDMYAKCGL---VKVARNLFEQLREKRVVSWNAMITGYAMHGHST------K 225
+ L +MYA G V RNL + K+ ++ + +H ++ +
Sbjct: 524 IAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPE 583
Query: 226 ALDLFEKM 233
+ D++EK+
Sbjct: 584 SEDIYEKL 591
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/539 (38%), Positives = 315/539 (58%), Gaps = 34/539 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
L L++ YS C + A Q+FD + +R+L WN +I Y N A++++ +
Sbjct: 97 TLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNE 156
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G FT L AC E +++H ++ + +++VG AL+D+YAKC + +A
Sbjct: 157 GFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDA 216
Query: 128 RQVFDKILER---------------------------------DPSEATLVTVISASADI 154
QVF+ + ++ + ++ TL +VI A +++
Sbjct: 217 VQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNL 276
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
AAL +G+++H + F NV V ++ VDMYAKCG ++ + +F +++EK + WN +I
Sbjct: 277 AALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTII 336
Query: 215 TGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+G+A H + + LFEKM+ D + P+ +TF +LS C GL +EGR FF+ M Y +
Sbjct: 337 SGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGL 396
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P+V HY+CMVD+LG +G L EA +LI + P +WG+LL SC+++ +++LAE+A E
Sbjct: 397 SPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAE 456
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
KL ELEP +AGN+V+LSNIYA WE +AK RKL+ D +KK SWI++K+K H F
Sbjct: 457 KLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFS 516
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
G++ HP EI + L L + ++ GY P E HDVE +K ++ HSE+LA+ FG
Sbjct: 517 VGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFG 576
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+ P+ + + I KNL+IC DCH +K S T R I VRDVNR+HHF DG CSCGD+W
Sbjct: 577 LMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 145/307 (47%), Gaps = 38/307 (12%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP 139
L+ C+ A+ E + H +IR E DV + LI+ Y+KC V ARQVFD +LER
Sbjct: 68 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL 127
Query: 140 ---------------------------------SEATLVTVISASADIAALPQGRELHGF 166
SE T+ +V+SA + ++LH
Sbjct: 128 VSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCL 187
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
S + +LN+ V TAL+D+YAKCG++K A +FE +++K V+W++M+ GY + + +A
Sbjct: 188 SVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEA 247
Query: 227 LDLFEK-MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
L L+ + + ++ + T V+ ACS EG+ +++ +V + VD
Sbjct: 248 LLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ-MHAVICKSGFGSNVFVASSAVD 306
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHDA 343
+ G L E+ + +++ K + +W +++ H K + EK+ + + P++
Sbjct: 307 MYAKCGSLRESYIIFSEVQEK-NLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV 365
Query: 344 GNYVILS 350
+LS
Sbjct: 366 TFSSLLS 372
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ A A+ + + HG R E +V + L++ Y+KCG V++AR +F+ + E+
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+VSWN MI Y + ++ALD+F +M++E + T VLSAC E +
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
V+ ID ++ T ++DL G + +A + M+ K W +++
Sbjct: 187 LSVKTC-IDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSV-TWSSMV 235
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNG-PYEVAIEL 60
GFG + +A+ V +Y+ C L ++ +F + ++NL LWN +I +A + P EV I L
Sbjct: 293 GFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMI-L 351
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMY 118
+ ++ + G+ P+ TF L C +EEGRR + ++R + +V + ++D+
Sbjct: 352 FEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFK-LMRTTYGLSPNVVHYSCMVDIL 410
Query: 119 AKCSCVVNARQVFDKILERDPSEA 142
+ + A ++ K + DP+ +
Sbjct: 411 GRAGLLSEAYELI-KSIPFDPTAS 433
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/536 (39%), Positives = 325/536 (60%), Gaps = 40/536 (7%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y + + +A +LFD IP +++ WN +I Y G Y+ A+EL+ ++ + V
Sbjct: 159 TALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNV 218
Query: 71 -PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
PD T + AC+ +IE GR +H + + + +++ + ALID+Y+K V A +
Sbjct: 219 RPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACE 278
Query: 130 VFDKILERD---------------------------------PSEATLVTVISASADIAA 156
+FD + +D P++ T+++++ A A + A
Sbjct: 279 LFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 338
Query: 157 LPQGRELHGFSWRHRFELNVKV---KTALVDMYAKCGLVKVARNLFEQLREKRVVS-WNA 212
+ GR +H + + + V +T+L+DMYAKCG + A+ +F+ R +S WNA
Sbjct: 339 IDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNA 398
Query: 213 MITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
MI+G+AMHG + A D+F +M+ + ++PD ITFVG+LSACS G+ D GR F SM R Y
Sbjct: 399 MISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGY 458
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
I P ++HY CM+DLLGHSG EA ++I M ++PD +W +LL +CK+HG+++L E
Sbjct: 459 EITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESF 518
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI-ACSWIEVKNKAH 390
+KLI++EP ++G+YV+LSNIYA A W VAK+R L+ D+G+KK + CS IE+ + H
Sbjct: 519 AKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVH 578
Query: 391 AFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAI 450
F+ GD HP EIY L+ +E ++EAG+VP T V ++E + + + HSE+LAI
Sbjct: 579 EFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWREGALRHHSEKLAI 638
Query: 451 AFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
AFGLI+T GT+L I KNL++C +CH A K ISKI +REI RD R+ HF+DG+C
Sbjct: 639 AFGLISTKPGTKLTIMKNLRVCKNCHEATKLISKIYKREIIARDRTRFXHFRDGVC 694
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 175/377 (46%), Gaps = 70/377 (18%)
Query: 21 DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
D A +FD I + NL +WN + R +A + A++LY ++ +GL+PD++TFPF L
Sbjct: 37 DGFPYAISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLL 96
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ----------- 129
K+C+ +EG++IH V++ ++ D++V +LI MYA+ + +AR+
Sbjct: 97 KSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVV 156
Query: 130 --------------------VFDKILERD------------------------------- 138
+FD+I +D
Sbjct: 157 SYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMT 216
Query: 139 ---PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
P E+T+VTV+SA A ++ GR +H + H F N+K+ AL+D+Y+K G V+ A
Sbjct: 217 NVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETA 276
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRG 254
LF+ L K V+SWN +I GY +AL LF++M + P+ +T + +L AC+
Sbjct: 277 CELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 336
Query: 255 GLFDEGR---MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV 311
G D GR ++ ++ + S T ++D+ G +D A +
Sbjct: 337 GAIDIGRWIHVYINKKLKGVVTNVSSLQ-TSLIDMYAKCGDIDAAQQVFDSSMSNRSLST 395
Query: 312 WGALLNSCKLHGHVKLA 328
W A+++ +HG A
Sbjct: 396 WNAMISGFAMHGRANAA 412
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 29/314 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + L+ LYS + A +LFD + +++ WN LI Y Y+ A+ L+
Sbjct: 252 GFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLF 311
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG-----AALID 116
+L G P++ T L AC+ L AI+ GR IH V NK V +LID
Sbjct: 312 QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH--VYINKKLKGVVTNVSSLQTSLID 369
Query: 117 MYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELN- 175
MYAKC + A+QVFD + + S +T +IS A GR F R +N
Sbjct: 370 MYAKCGDIDAAQQVFDSSMS-NRSLSTWNAMISGFA-----MHGRANAAFDIFSRMRMNG 423
Query: 176 -VKVKTALVDMYAKC---GLVKVARNLFEQLREKRVVS-----WNAMITGYAMHGHSTKA 226
V + + C G++ + RN+F + ++ + MI G +A
Sbjct: 424 IEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEA 483
Query: 227 LDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP-SVQHYTCMVD 285
++ M ++PD + + +L AC G + G F + +++ I+P + Y + +
Sbjct: 484 EEMINTMP--MEPDGVIWCSLLKACKIHGNLELGESFAKKLIK---IEPGNSGSYVLLSN 538
Query: 286 LLGHSGRLDEACDL 299
+ +GR +E +
Sbjct: 539 IYAAAGRWNEVAKI 552
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 139/306 (45%), Gaps = 58/306 (18%)
Query: 63 RLLEIGLVPDNFT-FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+LLE +V +F FP+A+ S I+E + W T +F G AL
Sbjct: 25 KLLEFCVVSPHFDGFPYAI---SVFDTIQEPNLL-------IWNT-MFRGHAL------S 67
Query: 122 SCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
S V+A +++ ++ P T ++ + A +G+++HG + F+L++ V
Sbjct: 68 SDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVH 127
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNA--------------------------- 212
T+L+ MYA+ G ++ AR +F+ + VVS+ A
Sbjct: 128 TSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVV 187
Query: 213 ----MITGYAMHGHSTKALDLFEK--MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
MI+GY G+ +AL+LF++ M V+PD T V V+SAC++ + GR S
Sbjct: 188 SWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGR-HVHS 246
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+ D+ +++ ++DL G ++ AC+L + K D W L+ + H+
Sbjct: 247 WINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNK-DVISWNTLIGG---YTHMN 302
Query: 327 LAELAL 332
L + AL
Sbjct: 303 LYKEAL 308
>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/606 (35%), Positives = 326/606 (53%), Gaps = 100/606 (16%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFL-WNVLIRAYAWNGPYEVAIELYYRLL 65
P L + ++ +YS + LH++ +F+ +P L W +IR Y +G + ++ + ++L
Sbjct: 39 PSLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQML 98
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV- 124
G PD+ FP LK+C+ + + G +H +IR D++ AL++MY+K +
Sbjct: 99 ASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLE 158
Query: 125 -VNA---------------------------RQVFDKILERD------------------ 138
VN R+VF+ + +RD
Sbjct: 159 EVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHE 218
Query: 139 ---------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALV 183
P TL +V+ A+ L +G+E+HG++ R+ ++ +V + ++L+
Sbjct: 219 DALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLI 278
Query: 184 DMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM---------- 233
DMYAKC V + +F L + +SWN++I G +G + L F++M
Sbjct: 279 DMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHV 338
Query: 234 ---------------------------KDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
+ V+P+++ F+ VL+ACS GL DE +F S
Sbjct: 339 SFSSIMPACAHLTTLHLGKQLHGYIIRMEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNS 398
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M +DY I P ++HY + DLLG GRL+EA + I M ++P VW LL +C++H +++
Sbjct: 399 MTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIE 458
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
LAE +KL ++P + G YV+LSNIY+ A W+ KLR M D+G+KK ACSWIE+K
Sbjct: 459 LAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIK 518
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
NK HAF++GD SHP D I LK L +M+ GYV T V HDVE ++K ++C HSE
Sbjct: 519 NKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSE 578
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
RLAI FG+I+TP GT + +TKNL++C DCH A KFISKI REI VRD +R+HHFKDG C
Sbjct: 579 RLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKC 638
Query: 507 SCGDYW 512
SCGD+W
Sbjct: 639 SCGDFW 644
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 55/100 (55%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ + + L+ +Y+ C + ++ ++F +PQ + WN +I NG ++ ++ +
Sbjct: 266 GYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFF 325
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR 101
++L + P++ +F + AC+ L+ + G+++H +IR
Sbjct: 326 QQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIR 365
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/515 (40%), Positives = 312/515 (60%), Gaps = 11/515 (2%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G G + T L+ +Y+ + A + D + +L +NVL+ Y G +A +L
Sbjct: 134 IGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDL 193
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+ E LV N + ++L + +++ + E D+ +++I YAK
Sbjct: 194 FDRMPERDLVSWNTM----IHGHASLGDVGTAKKLFD----RTCERDLISWSSMIAAYAK 245
Query: 121 CSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
A ++F ++ + P + T+V+V+SA D+ AL G+ +H R+R E+++K+
Sbjct: 246 ARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKL 305
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEV 237
T+LVDMYAKCG + + +F + + V +W+AMI G A HG ALD F KM +++
Sbjct: 306 GTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDI 365
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
+P+ +TF+GVLSACS GL DEG +F SM + Y + P ++HY C+VD+LG +GRL EA
Sbjct: 366 KPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAM 425
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAA 357
+LI M PD VW ALL +C+++ +V++AE A L+ELEPH GNYV+LSNIY++A
Sbjct: 426 ELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAK 485
Query: 358 NWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK 417
W+ V +R++M + I+K S IEV N H F++GD SHP +I L + R+K
Sbjct: 486 EWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITARLK 545
Query: 418 EAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHI 477
GY P T SV D + EK N + HSE+LAIAFGL++T G+ + I KNL++CDDCHI
Sbjct: 546 ANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDDCHI 605
Query: 478 AIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
AIK IS+ +R I VRD NR+HHF +G CSC DYW
Sbjct: 606 AIKLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 640
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 181/361 (50%), Gaps = 30/361 (8%)
Query: 4 GFHPVLATKLVHLY---SACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
G + VLA L L+ SA D L+ A +FD IP + F+WN +IRAY + + ++ L
Sbjct: 33 GNNFVLAKLLRRLFACSSANDLLY-ARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSL 91
Query: 61 YYRLLEIGLVP-DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
++++ +P D+++ ++AC L G+++H V++ +D+FV ALI+MYA
Sbjct: 92 FFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYA 151
Query: 120 KCSCVVNARQVFDKILERD-------PSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
K + AR + D++ D +E V I+ + D+ R+L SW
Sbjct: 152 KFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDL--VSW---- 205
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
++ +A G V A+ LF++ E+ ++SW++MI YA S +AL LF +
Sbjct: 206 -------NTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHE 258
Query: 233 MK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
M+ V PD +T V VLSAC G G+M E + R+ I+ ++ T +VD+ G
Sbjct: 259 MQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERN-RIEIDLKLGTSLVDMYAKCG 317
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI--ELEPHDAGNYVIL 349
+D + + M + D W A++ HG +LA K+I +++P+D +L
Sbjct: 318 DIDNSLRVFNGMNNR-DVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVL 376
Query: 350 S 350
S
Sbjct: 377 S 377
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/518 (39%), Positives = 300/518 (57%), Gaps = 31/518 (5%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV-AIELYYRLLEIGLVPDNFTFPFALKACS 84
A ++F R+P N+ W LI Y G E A+EL +L + P++ T+ LKAC+
Sbjct: 306 ARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACA 365
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------ 138
LS + GR+IH V++ VG AL+ MYA+ C+ AR+ FD++ ER+
Sbjct: 366 NLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSS 425
Query: 139 ----------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
S T +++SA+A + +G++LH S + FE +
Sbjct: 426 DIGETGRSNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDK 485
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREK-RVVSWNAMITGYAMHGHSTKALDLFEKM-K 234
+ +LV MY++CG + A F+++ + V+SW ++I+ A HGH+ +AL LF M
Sbjct: 486 GISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMIL 545
Query: 235 DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLD 294
V+P+ +T++ VLSACS GL EG+ +F SM +D+ + P ++HY CMVDLL SG +
Sbjct: 546 SGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQ 605
Query: 295 EACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYA 354
EA + I +M K D VW LL +C+ + ++++ E+A +I+LEP D YV+LSN+YA
Sbjct: 606 EALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYA 665
Query: 355 RAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEG 414
W+ VA++R LM R + K SW+ V N H F +GD SHP EIYAKL L
Sbjct: 666 HGGLWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIR 725
Query: 415 RMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDD 474
+K+ GYVP T V HD+ + K + HSE++A+AFGLI T + I KNL++C D
Sbjct: 726 EIKDIGYVPDTSIVLHDMSDKLKEQCLLQHSEKIAVAFGLITTLPTKPIRIFKNLRVCAD 785
Query: 475 CHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
CH AIK+ISK T REI +RD NR+H KDG CSCG+YW
Sbjct: 786 CHSAIKYISKSTGREIILRDSNRFHRMKDGKCSCGEYW 823
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 154/330 (46%), Gaps = 42/330 (12%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQ-RNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
++A L+ +YS C + A ++FD + R+L W + NG + A+ L +LE
Sbjct: 80 LVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEMLE 139
Query: 67 IGLVPDNFTFPFALKAC--SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
GL P+ FT A AC L G + + W TDV VG ALIDM+A+ +
Sbjct: 140 SGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNGDL 199
Query: 125 VNARQVFDKILER---------------------------------DPSEATLVTVISAS 151
V AR+VF+ ++ER +P T+ +++SA
Sbjct: 200 VAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSAC 259
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGL---VKVARNLFEQLREKRVV 208
A+ + G++LH R + V LVDMY K + ++ AR +F+++ V+
Sbjct: 260 AEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVM 319
Query: 209 SWNAMITGYAM-HGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
SW A+I+GY G A++L E + + ++P+H+T+ +L AC+ D GR
Sbjct: 320 SWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHAR 379
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+++ + +V +V + SG ++EA
Sbjct: 380 VMKTSIGNVNVVG-NALVSMYAESGCMEEA 408
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 177/402 (44%), Gaps = 52/402 (12%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ +++ L A ++F+ + +R + +W ++I Y G A+EL+ +LE G PD
Sbjct: 189 LIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPD 248
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN---ARQ 129
+T + AC+ + G+++H V+R +D V L+DMY K + AR+
Sbjct: 249 GYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARK 308
Query: 130 VFDKILER----------------------------------DPSEATLVTVISASADIA 155
VF ++ +P+ T +++ A A+++
Sbjct: 309 VFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLS 368
Query: 156 ALPQGRELHGFSWRHRF-ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
GR++H + +NV V ALV MYA+ G ++ AR F+QL E+ ++S ++ I
Sbjct: 369 DQDSGRQIHARVMKTSIGNVNV-VGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDI 427
Query: 215 --TGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFE-SMVRDY 271
TG + S++ E M +V TF +LSA + GL +G+ S+ +
Sbjct: 428 GETGRSNASWSSQ----IESM--DVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGF 481
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
D + + +V + G LD+AC +M + W +++++ HGH + A
Sbjct: 482 ESDKGISN--SLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSL 539
Query: 332 LEKLI--ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMID 371
+I ++P+D +LS EG R + D
Sbjct: 540 FHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKD 581
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 134/308 (43%), Gaps = 27/308 (8%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYA-WNGPYEVAIELYYRLLE 66
V+ LV +Y+ C+ A + FD++ +RNL + I N + IE ++
Sbjct: 390 VVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNASWSSQIE----SMD 445
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
+G+ FTF L A + + +G+++H I+ +E+D + +L+ MY++C + +
Sbjct: 446 VGV--STFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDD 503
Query: 127 ARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL-----NVKVKTA 181
A + FD+ +E D + + ++ISA A G S H L N A
Sbjct: 504 ACRAFDE-MEDDHNVISWTSIISALAK-----HGHAERALSLFHDMILSGVKPNDVTYIA 557
Query: 182 LVDMYAKCGLVKVARNLFEQLRE-----KRVVSWNAMITGYAMHGHSTKALDLFEKMKDE 236
++ + GLVK + F +++ R+ + M+ A G +AL+ +M
Sbjct: 558 VLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMP-- 615
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+ D + + +L AC + G + ++ DP+ Y + +L H G DE
Sbjct: 616 CKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPA--PYVLLSNLYAHGGLWDEV 673
Query: 297 CDLIMQMR 304
+ MR
Sbjct: 674 ARIRSLMR 681
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP-QRNLFLWNVLIRAYAWNGPYEVAIEL 60
GF ++ LV +YS C L +A + FD + N+ W +I A A +G E A+ L
Sbjct: 480 GFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSL 539
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
++ ++ G+ P++ T+ L ACS + ++EG+
Sbjct: 540 FHDMILSGVKPNDVTYIAVLSACSHVGLVKEGK 572
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/546 (39%), Positives = 323/546 (59%), Gaps = 43/546 (7%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWN-GPYEVAIELYYRLLEI 67
L ++++H+ S D A ++F++I N F+WN LI A A + E AIE++YR+LE
Sbjct: 61 LYSRILHVSSLID-FDYACRVFNQIDNPNSFMWNTLIGACARSLDRKEQAIEIFYRMLEE 119
Query: 68 GLV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
G V PD TFPF LKAC+ + A+ EGR+ H + + + DV+VG +LI +YA C C+
Sbjct: 120 GSVEPDKHTFPFLLKACAYVFALSEGRQAHAQIFKLGLDLDVYVGNSLIHLYASCGCLSM 179
Query: 127 ARQVFDKILER--------------------------------DPSEATLVTVISASADI 154
A +VF+K+ R +P T+ +++SA A I
Sbjct: 180 ALKVFEKMPLRSLVSWNVMIDAYVQSGLFENALKLFVEMQNSFEPDGYTMQSIVSACAGI 239
Query: 155 AALPQGRELHGFSWRHR---FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
AL G H + R +V + ++LVDMY+KCG +++A+ +FE + + + SWN
Sbjct: 240 GALSLGMWAHAYVLRKASGAMAGDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWN 299
Query: 212 AMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
+MI AMHG AL F ++ ++ P+ +TFVGVLSAC+ GG+ +GR +F+ MV
Sbjct: 300 SMILALAMHGRGQAALQCFSRLVEMEKFLPNSVTFVGVLSACNHGGMVADGRKYFDMMVN 359
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC-KLHGHVKLA 328
DY I+P ++HY C+VDLL SG +DEA +L+ M +KPD +W +LL++C K + V+L+
Sbjct: 360 DYKIEPRLEHYGCLVDLLSRSGFIDEALELVANMHIKPDAVIWRSLLDACYKQNAGVELS 419
Query: 329 ELALEKLIELEPH-DAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E K+++ E +G YV+LS +YA A W V +RK+M D G+ K CS IE+
Sbjct: 420 EEVAFKILQSEKTISSGVYVMLSRVYASARQWNDVGIIRKVMTDMGVTKEPGCSSIEIDG 479
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPG-TESVFHDVENDEKANMICCHSE 446
+H F +GD SHP EIY + +E +++ GY P +++ D ++ K + HSE
Sbjct: 480 ISHEFFAGDTSHPRIKEIYGVIDLIEEKLERRGYSPDCSQATMVDEPDNIKQQSLKLHSE 539
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
RLAIAFGL+N GT + I KNL++C+DCH K IS+I EI +RD NR+HHFK G+C
Sbjct: 540 RLAIAFGLLNLKPGTPVRIFKNLRVCNDCHQVTKLISEIFNVEIIMRDRNRFHHFKHGMC 599
Query: 507 SCGDYW 512
SC D+W
Sbjct: 600 SCMDFW 605
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/435 (45%), Positives = 270/435 (62%), Gaps = 34/435 (7%)
Query: 112 AALIDMYAKCSCVVNARQVFDKILERD--------------------------------- 138
A+I YAK + AR +FD + ERD
Sbjct: 10 TAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVR 69
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P+E T++ V+SA AL GR +H + + +NV+V T+L+DMY+KCG ++ AR +
Sbjct: 70 PNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLV 129
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLF 257
FE++ K VV+WN+M+ GYAMHG S AL LF++M QP ITF+GVL+ACS GL
Sbjct: 130 FERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLV 189
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
EG FF SM +Y I+P V+HY CMV+LLG +G L+EA +L+ M + DP +WG LL
Sbjct: 190 SEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLG 249
Query: 318 SCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKS 377
+C+LHG++ L E E L+ ++G YV+LSNIYA A NWEGVA++R LM + G +K
Sbjct: 250 ACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTLMKESGFEKE 309
Query: 378 IACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEK 437
CS IEV NK H FL+GD HP EIY L+ + G +K GY P T+ V HD+E+ +K
Sbjct: 310 PGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQTDIVLHDLEDAQK 369
Query: 438 ANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNR 497
+ HSE+LA+AFGLI T GT + I KNL++C DCH K ISKIT R++ +RD NR
Sbjct: 370 ERSLGVHSEKLALAFGLITTKPGTTIKIVKNLRVCADCHAVTKLISKITGRKVVMRDRNR 429
Query: 498 YHHFKDGICSCGDYW 512
+HHF +G+CSCGDYW
Sbjct: 430 FHHFVNGLCSCGDYW 444
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G G + + T L+ +YS C L +A +F+RI +++ WN ++ YA +G + A+ L+
Sbjct: 102 GIGINVRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLF 161
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ IG P + TF L ACS + EG
Sbjct: 162 KEMCMIGYQPTDITFIGVLNACSHAGLVSEG 192
>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Brachypodium distachyon]
Length = 647
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/524 (38%), Positives = 304/524 (58%), Gaps = 34/524 (6%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L +A +LFD++P RN+ WN ++ G E +++ + + G+ PD F +
Sbjct: 124 LGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRC 183
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI-------- 134
C+ L + GR++H V+R+ ++D+ VG +L MY +C C+ V +
Sbjct: 184 CAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSF 243
Query: 135 -------------------------LERDPSEATLVTVISASADIAALPQGRELHGFSWR 169
+E P T V+ IS +D+AAL QG+++H +
Sbjct: 244 NTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIK 303
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
+ V V T+LV MY++CG + + +++ + +AMI+ HG KA++L
Sbjct: 304 AGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVEL 363
Query: 230 FEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
F++M + +P+ +TF+ +L ACS GL DEG FFE M + Y PSV+HY C+VDLLG
Sbjct: 364 FKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLG 423
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
SG LDEA LI+ M V+ D +W LL++CK + +AE E++IE +P D+ YV+
Sbjct: 424 RSGCLDEAEALILSMPVRADGVIWKTLLSACKTQKNFDMAERIAERVIESDPRDSAPYVL 483
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAK 408
LSNI A + W V ++RK+M ++ I+K SW+E K + H F +GD SHP EI
Sbjct: 484 LSNIRATSKRWGDVTEVRKIMREKDIRKEPGVSWVEHKGQVHQFCTGDKSHPRQGEIDEY 543
Query: 409 LKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKN 468
LK + G++++ GY P VFHD+E++EK + HSE+LAIAF +N P+G + + KN
Sbjct: 544 LKEMMGKIRQCGYAPDMTMVFHDMEDEEKEVSLTHHSEKLAIAFAFLNLPEGVPIRVMKN 603
Query: 469 LKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L++CDDCH+AIK IS++T REI VRDV+R+HHF+DG CSCGDYW
Sbjct: 604 LRVCDDCHVAIKLISQVTGREIVVRDVSRFHHFRDGRCSCGDYW 647
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
A+P R+LH F+ + L+ YA G + AR+LFE + ++ V+SWN +I
Sbjct: 57 AIPLLRQLHAFAATSGAAADRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIG 116
Query: 216 GYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
G +G A +LF+KM + T+ +++ + GL ++ FF +M R+
Sbjct: 117 GCIKNGDLGSARELFDKMPTR---NVATWNAMVAGLTNVGLDEDSLQFFLAMRRE 168
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/552 (38%), Positives = 318/552 (57%), Gaps = 65/552 (11%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +FDRI + N F+WN +IR Y+ + E A+ LY+ +L + + +TFPF LKACS+
Sbjct: 71 ARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSS 130
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAAL------------------------------- 114
+SA EE ++IH +I+ + ++++ +L
Sbjct: 131 MSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSM 190
Query: 115 IDMYAKCSCVVNARQVFDKILERD----------------PSEA---------------- 142
ID Y KC + A ++F+ + ER+ P EA
Sbjct: 191 IDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDN 250
Query: 143 -TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
LV+ + A AD+ L QG+ +H + +H E++ + L+DMYAKCG ++ A +F +
Sbjct: 251 VALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRK 310
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEG 260
+ EK V W AMI+GYA+HG +AL+ F KM+ V+P+ +TF G+L+ACS GL E
Sbjct: 311 MEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEA 370
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
++ FESM R + PS++HY CMVDLLG +G L EA +LI M VKP+ +WGALLN+C
Sbjct: 371 KLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACH 430
Query: 321 LHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIAC 380
+HG+++L + + LI+++P G Y+ L++I+A A W A++R+ M ++G+ K C
Sbjct: 431 IHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGC 490
Query: 381 SWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANM 440
S I V AH FL+GD SHP EI L+ + R++E GY P + D+E+ EK
Sbjct: 491 SVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETA 550
Query: 441 ICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHH 500
I HSE+LA+ FGLI+T G + I KNL++C+DCH IK ISK+ REI +RD R+H
Sbjct: 551 IHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHL 610
Query: 501 FKDGICSCGDYW 512
FKDG C+CGDYW
Sbjct: 611 FKDGNCTCGDYW 622
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P+L L+ +Y+ C L A ++F ++ ++ + +W +I YA +G A+E + ++
Sbjct: 285 PILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQT 344
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR-NKWETDVFVGAALIDMYAKCSCVV 125
G+ P+ TF L ACS + E + + E + R + ++ + ++D+ + +
Sbjct: 345 AGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLK 404
Query: 126 NARQVFDKI 134
A ++ + +
Sbjct: 405 EAEELIENM 413
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 73/171 (42%), Gaps = 5/171 (2%)
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAK--CGLVKVARNLFEQLREKRVVSWNAMITGYA 218
R++HG + L+ + L+ A G + AR +F+++ WN MI GY+
Sbjct: 35 RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYS 94
Query: 219 MHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
+AL L+ M P + TF +L ACS +E + +++ +
Sbjct: 95 NSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIK-MGFGSEI 153
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
++++ SG + A L Q+ + D W ++++ G +++A
Sbjct: 154 YTTNSLLNVYSKSGDIKSARLLFDQVDQR-DTVSWNSMIDGYTKCGEIEMA 203
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/523 (39%), Positives = 319/523 (60%), Gaps = 37/523 (7%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWN-GPYEVAIELYYRLLEIGLV-PDNFTFPFALKAC 83
A +LF +I + N+F WN +IR + + P + + L+ +++ G P+ FT F LKAC
Sbjct: 43 ARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKAC 102
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----- 138
S +SA+EEG+++H +V+++ + + FV AL++ YAKC +V A +VFD+I +R+
Sbjct: 103 SIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWS 162
Query: 139 ----------------------------PSEATLVTVISASADIAALPQGRELHGFSWRH 170
P E T+V+VISA A AL G+ +H + +
Sbjct: 163 TMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQ 222
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
E ++++ TALV+MYAKCG ++ A+ +F+ + K +W++MI G A++G + AL+ F
Sbjct: 223 LIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEF 282
Query: 231 EKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGH 289
+M++ +V+P+H+TF+GVLSAC+ GL EGR ++ SM+ ++ I PS++ Y CMVDLL
Sbjct: 283 FRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSML-EFGIVPSMELYGCMVDLLCR 341
Query: 290 SGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVIL 349
+ +++AC L+ M + P+P +W LL CK ++ +E+ ++L+ELEPH+A NY++L
Sbjct: 342 ASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEPHNAENYILL 401
Query: 350 SNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKL 409
SN+YA + WE ++++RK M GIK CS IEV H F+ GD SHP E+ L
Sbjct: 402 SNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREIL 461
Query: 410 KWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNL 469
+ + R+ G+ PG V H+V ++EK N +C HSERLAIA+GL+ T + I KNL
Sbjct: 462 RDISKRVHAVGHQPGISDVLHNVVDEEKENALCEHSERLAIAYGLLKTKTPMAIRIVKNL 521
Query: 470 KICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++C DCH K IS REI VRD R+H F +G CSC D+W
Sbjct: 522 RVCGDCHEVTKIISAEYRREIIVRDRVRFHKFVNGSCSCRDFW 564
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 116/253 (45%), Gaps = 42/253 (16%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG P + T LV+ Y+ C+ + A ++FD I RNL W+ +I YA G A+ L+
Sbjct: 122 GFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLF 181
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + G+VPD T + AC+A A++ G+ +H + + ETD+ + AL++MYAKC
Sbjct: 182 RDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKC 241
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
C+ A++VFD + +D P+ T + V+
Sbjct: 242 GCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVL 301
Query: 149 SASADIAALPQGRELHGFSWRHRFELNV----KVKTALVDMYAKCGLVKVARNLFEQLR- 203
SA A + +GR W E + ++ +VD+ + LV+ A L E +
Sbjct: 302 SACAHSGLVSEGRRY----WSSMLEFGIVPSMELYGCMVDLLCRASLVEDACTLVETMPI 357
Query: 204 EKRVVSWNAMITG 216
V W ++ G
Sbjct: 358 SPNPVIWRTLLVG 370
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 81/204 (39%), Gaps = 42/204 (20%)
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAKCGL-----VKVARNLFEQLREKRVVSWNAMIT 215
R++H H ++ + L + C L + AR LF Q++ + SWN+MI
Sbjct: 5 RQIHARLLTHAMPIS-SISFGLCKIIGFCALSPYGDIDYARKLFSQIQRPNIFSWNSMIR 63
Query: 216 GYAMHGHSTK-ALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRM---------- 262
G + +K + LF KM + P+ T VL ACS +EG+
Sbjct: 64 GCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLKSGF 123
Query: 263 ----FFESMVRDYH----------------IDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
F E+ + +++ D ++ ++ M+ G ++EA L
Sbjct: 124 GSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRD 183
Query: 303 MR---VKPDPGVWGALLNSCKLHG 323
M+ V PD +++++C G
Sbjct: 184 MQKAGVVPDEVTMVSVISACAASG 207
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/556 (39%), Positives = 319/556 (57%), Gaps = 69/556 (12%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-EIGLVPDNFTFPFALKACS 84
A F+++ +R++ WN +I Y +G A++++ ++L + PD FT AL AC+
Sbjct: 230 AQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACA 289
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV-------------------- 124
L ++ G++IH +IR +++T VG ALI MY+K V
Sbjct: 290 NLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAF 349
Query: 125 ------------VN-ARQVFDKILERD--------------------------------- 138
+N AR++FD + RD
Sbjct: 350 TALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPK 409
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P+ TL T++S S+ +A+L GR++H + R +V V AL+ MYAK G + AR +
Sbjct: 410 PNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWV 469
Query: 199 FEQLREKR-VVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGL 256
F + KR ++W +MI A HG +AL LFE+M ++ ++PDHIT+VGVLSAC+ GL
Sbjct: 470 FNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGL 529
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
++GR ++ M + I P+ HY CM+DL G +G L EA I M ++PD WG+LL
Sbjct: 530 VEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLL 589
Query: 317 NSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKK 376
SCK+H +V+LAE+A E+L+ +EP ++G Y L+N+Y+ WE A +RK M D+G+KK
Sbjct: 590 ASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKK 649
Query: 377 SIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDE 436
SW+++KNK H F D HP D IY + + +K+ G+VP TESV HD+E +
Sbjct: 650 DQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDLEEEL 709
Query: 437 KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVN 496
K ++ HSE+LAIAFGLI TP+ T L I KNL++C+DCH AIKFISK+ REI VRD
Sbjct: 710 KEQILSHHSEKLAIAFGLICTPENTTLRIMKNLRVCNDCHSAIKFISKLVGREIIVRDAT 769
Query: 497 RYHHFKDGICSCGDYW 512
R+HHFK+G+CSC DYW
Sbjct: 770 RFHHFKNGLCSCRDYW 785
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 174/403 (43%), Gaps = 79/403 (19%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYA------------------- 49
L L++ Y+ +++AH++FD +P +++F WN+++ YA
Sbjct: 50 LMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPD 109
Query: 50 ---WN---------GPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHE 97
W G +E AI ++ ++ + P FT L +C+A+ + GR++H
Sbjct: 110 SVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHS 169
Query: 98 DVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAAL 157
V+++ + + V +L++MYAK V A+ VFD++ + S
Sbjct: 170 FVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTS----------------- 212
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
SW ++ + + GLV +A+ FEQ+ E+ VVSWNAMI+GY
Sbjct: 213 ---------SW-----------NTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGY 252
Query: 218 AMHGHSTKALDLFEK--MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
HG +ALD+F K M +PD T LSAC+ G+ ++R D
Sbjct: 253 NQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRT-EFDT 311
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQ-MRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
++ + SG ++ A +I Q M D + ALL+ G+VKL ++ +
Sbjct: 312 FGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLD-----GYVKLGDINPAR 366
Query: 335 LI--ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIK 375
I L D + + Y + + +L + MI G K
Sbjct: 367 RIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPK 409
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 122/282 (43%), Gaps = 39/282 (13%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y ++ A ++FD + R++ W +I Y NG + A+EL+ +++ G
Sbjct: 350 TALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPK 409
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
P+N+T L S+L++++ GR+IH R+ + V V ALI MYAK + +AR V
Sbjct: 410 PNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWV 469
Query: 131 FDKI----------------------------LER------DPSEATLVTVISASADIAA 156
F+ I ER P T V V+SA +
Sbjct: 470 FNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGL 529
Query: 157 LPQGRELHGFSWR-HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-EKRVVSWNAMI 214
+ QGR + H+ ++D++ + GL++ A E + E V++W +++
Sbjct: 530 VEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLL 589
Query: 215 TGYAMHGHSTKALDLFEKM---KDEVQPDHITFVGVLSACSR 253
+H + A E++ + E + V SAC +
Sbjct: 590 ASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQ 631
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 34/210 (16%)
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G+ +H + L V + L++ YAK G + A +F+++ K V SWN +++GYA
Sbjct: 32 GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91
Query: 220 HGHSTKALDLFEKM--------------------------------KDEVQPDHITFVGV 247
G +A +FE+M D+V P T V
Sbjct: 92 GGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNV 151
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
L++C+ GR S V + + + ++++ SG A + +M++K
Sbjct: 152 LASCAAVECLGIGRK-VHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKS 210
Query: 308 DPGVWGALLNSCKLHGHVKLAELALEKLIE 337
W +++S G V LA++ E++IE
Sbjct: 211 TSS-WNTMISSHMQSGLVDLAQVQFEQMIE 239
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/490 (41%), Positives = 294/490 (60%), Gaps = 34/490 (6%)
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
A+EL+ + + G D T A KAC L +++G++IH I+ +++D+ V + ++D
Sbjct: 14 ALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILD 73
Query: 117 MYAKCSCVVNARQVFDKILERD---------------------------------PSEAT 143
MY KC +VNA VF+ I D P E T
Sbjct: 74 MYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYT 133
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
T+I AS+ + AL QGR+LH + + V T+LVDMYAKCG ++ A LF+++
Sbjct: 134 FATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMN 193
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRM 262
+ + WNAM+ G A HG++ +A++LF+ MK ++PD ++F+G+LSACS GL E
Sbjct: 194 VRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYE 253
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
+ SM DY I+P ++HY+C+VD LG +G + EA +I M K + ALL +C++
Sbjct: 254 YLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQ 313
Query: 323 GHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSW 382
G V+ + +L LEP D+ YV+LSNIYA A W+ V RK+M + +KK SW
Sbjct: 314 GDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSW 373
Query: 383 IEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMIC 442
I+VKN H F+ D SHP D IY K++ + ++E GYVP TE V DVE++EK +
Sbjct: 374 IDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLY 433
Query: 443 CHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFK 502
HSE+LAIA+GLI+TP T + + KNL++C DCH AIK+ISK+ EREI +RD NR+HHF+
Sbjct: 434 YHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFR 493
Query: 503 DGICSCGDYW 512
DG+CSCGDYW
Sbjct: 494 DGVCSCGDYW 503
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P + T LV +Y+ C + +A++LF ++ RN+ LWN ++ A +G E A+ L+ +
Sbjct: 166 PFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKS 225
Query: 67 IGLVPDNFTFPFALKACSALSAIEEG-RRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G+ PD +F L ACS E +H E ++ + L+D + V
Sbjct: 226 HGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQ 285
Query: 126 NARQVFDKILERDPSEAT 143
A DK++E P +A+
Sbjct: 286 EA----DKVIETMPFKAS 299
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/546 (38%), Positives = 319/546 (58%), Gaps = 36/546 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F + T L+ +Y+ C NA Q+F R+ Q+NL W+ +I A+A +G A+ +
Sbjct: 142 FELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFR 201
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC- 121
+ + G++P+ TF L + S +EE RIH + + + + AL+++Y +C
Sbjct: 202 MMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCE 261
Query: 122 ----------------------SCVVN----------ARQVFDKI-LERDP-SEATLVTV 147
+ ++N A + + ++ LE P + T ++V
Sbjct: 262 TGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISV 321
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
++A +L +G+ +H + + +V VK AL +MY+KCG ++ AR +F+ + +
Sbjct: 322 LNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSA 381
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSWN M+ YA HG S + L L KM+ E V+ + ITFV VLS+CS GL EG +F S
Sbjct: 382 VSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHS 441
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+ D I+ +HY C+VDLLG +G+L EA I +M +P+ W +LL +C++H +
Sbjct: 442 LGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLD 501
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
+LA KL+EL+P ++ V+LSNIY+ +W+ AKLR+ M R +KK S I+VK
Sbjct: 502 RGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVK 561
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
NK H F D SHP EIY K++ L M+EAGYVP T+ V HDV+ ++K +++ HSE
Sbjct: 562 NKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSE 621
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LAIAFGLI+TP+ + L I KNL++C+DCH A KFISKIT REI VRD +R+HHF+DG C
Sbjct: 622 KLAIAFGLISTPEKSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSC 681
Query: 507 SCGDYW 512
SC DYW
Sbjct: 682 SCKDYW 687
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 190/406 (46%), Gaps = 46/406 (11%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T LV+ Y+ C L +A ++FD +P R++ WN +I AY+ + A ++ R+ G
Sbjct: 49 TALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGER 108
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
D TF L AC ++ G+ + E + +E D+FVG ALI MYA+C NA QV
Sbjct: 109 CDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQV 168
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F ++ +++ P+ T +++++ + L
Sbjct: 169 FGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGL 228
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKC--GLVKVARNLFEQLREKRVVSWNAMIT 215
+ +H H + + ALV++Y +C G + VA + +++ E+++ +WN +I
Sbjct: 229 EELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLIN 288
Query: 216 GYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GY +HG S +AL+ +++++ E P D +TF+ VL+AC+ EG+M + V + +D
Sbjct: 289 GYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAV-ECGLD 347
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
V + ++ G ++ A + M ++ W +L + HG +E L+
Sbjct: 348 SDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVS-WNGMLQAYAQHGE---SEEVLKL 403
Query: 335 LIELEPH----DAGNYV-ILSNIYARAANWEGVAKLRKLMIDRGIK 375
+ ++E + +V +LS+ EG L DRGI+
Sbjct: 404 IRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIE 449
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 158/326 (48%), Gaps = 42/326 (12%)
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
LLE G+ + TF L + A+ +G+ IH V ++ DVFV AL++ Y KC
Sbjct: 2 LLE-GVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 124 VVNARQVFDK---------------------------ILERDPSEA------TLVTVISA 150
+ +AR+VFD I +R E T ++++ A
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
+ L G+ + FEL++ V TAL+ MYA+C + A +F ++++K +++W
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITW 180
Query: 211 NAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSA-CSRGGLFDEGRMFFESMV 268
+A+IT +A HGH +AL F M+ E + P+ +TF+ +L+ + GL + R+ ++
Sbjct: 181 SAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHL--LI 238
Query: 269 RDYHIDPSVQHYTCMVDLLG--HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
++ +D + +V++ G +G LD A ++I+Q + W L+N LHG +
Sbjct: 239 TEHGLDDTTTMSNALVNVYGRCETGELDVA-EVILQEMDEQQITAWNVLINGYTLHGRSR 297
Query: 327 LAELALEKL-IELEPHDAGNYVILSN 351
A ++L +E P D ++ + N
Sbjct: 298 EALETYQRLQLEAIPVDKVTFISVLN 323
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 122/244 (50%), Gaps = 10/244 (4%)
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T + V+++ D AL +G+ +H L+V V TALV+ Y KCG + AR +F+ +
Sbjct: 12 TFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGM 71
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGR 261
+ V +WN+MI+ Y++ S +A +F++M+ E + D +TF+ +L AC G+
Sbjct: 72 PCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGK 131
Query: 262 MFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
ES+ + +D V T ++ + + A + +M+ K + W A++ +
Sbjct: 132 HVRESISETSFELDLFVG--TALITMYARCRSPENAAQVFGRMKQK-NLITWSAIITAFA 188
Query: 321 LHGHVKLAELALEKLIELE---PHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKS 377
HGH A L ++++ E P+ ++ L N + + E ++++ L+ + G+ +
Sbjct: 189 DHGHCGEA-LRYFRMMQQEGILPNRV-TFISLLNGFTTPSGLEELSRIHLLITEHGLDDT 246
Query: 378 IACS 381
S
Sbjct: 247 TTMS 250
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/544 (36%), Positives = 317/544 (58%), Gaps = 34/544 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F + ++ + Y+ C L A +F + +++ WN +I +A NG A++ Y+
Sbjct: 447 FQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYF 506
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+ +G++PD+F+ L AC L ++ G+ IH V+RN E + FV +L+ +Y CS
Sbjct: 507 EMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCS 566
Query: 123 CVVNARQVFDKILER---------------------------------DPSEATLVTVIS 149
R F+++ ++ +P E + +++
Sbjct: 567 KPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILG 626
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A + ++AL G+E+H F+ ++ + V +L+DMYAK G + ++ +F +L K V S
Sbjct: 627 ACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVAS 686
Query: 210 WNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WN MITG+ +HG KA++LFE MK + QPD TF+GVL AC GL EG + M
Sbjct: 687 WNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQ 746
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
Y ++P ++HY C++D+LG +GRL+EA + I +M +PD +W +LL+S + +++
Sbjct: 747 TLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMG 806
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
E EKL+ LE + A +Y++LSN+YA A W+ V +R+ M D ++K + CSWIE++ K
Sbjct: 807 EKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGK 866
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
++F++G+ S+P+ DEI LE ++ E GY P V H++E EK ++ HSE++
Sbjct: 867 VYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKV 926
Query: 449 AIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
AI FG +NT +GT L I+KNL+IC DCH A K+ISK +REI +RD R+HHFK GICSC
Sbjct: 927 AICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSC 986
Query: 509 GDYW 512
GDYW
Sbjct: 987 GDYW 990
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 142/299 (47%), Gaps = 38/299 (12%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG + ++ LY C L A +LFD++P++NL WN LIR ++ NG + A
Sbjct: 239 MGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRA 298
Query: 61 YYRLLEIG--LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
+ LLE G L+PD T L CS ++ G IH ++ ++ V ALIDMY
Sbjct: 299 FRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMY 358
Query: 119 AKCSCVVNARQVFDKILER-----------------------------------DPSEAT 143
+KC C+ A +F KI + + +E T
Sbjct: 359 SKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVT 418
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
++ ++ A + + L R LHG+S RH F+ + A + YAKCG + A ++F +
Sbjct: 419 ILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMN 478
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDL-FEKMKDEVQPDHITFVGVLSACSRGGLFDEGR 261
K V SWNA+I G+A +G KALD FE + + PD + V +L AC R GL G+
Sbjct: 479 TKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGK 537
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 148/311 (47%), Gaps = 44/311 (14%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL T+L+ +YS C + +FDR+ +NLF WN L+ Y N Y+ AI + L+ +
Sbjct: 144 VLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISV 203
Query: 68 G-LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
PDNFTFP +KAC+ I G+ +H ++ D+FVG A+I +Y KC +
Sbjct: 204 TEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDE 263
Query: 127 ARQVFDKILERD-----------------------------------PSEATLVTVISAS 151
A ++FDK+ E++ P AT+VT++
Sbjct: 264 AVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVC 323
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+ + G +HG + + + V AL+DMY+KCG + A LF ++ K VVSWN
Sbjct: 324 SGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWN 383
Query: 212 AMITGYAMHGHSTKALDLFEKM---KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
+MI Y+ G + DL KM ++ ++ + +T + +L AC +E + +
Sbjct: 384 SMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPAC-----LEESELLSLRAL 438
Query: 269 RDYHIDPSVQH 279
Y + S Q+
Sbjct: 439 HGYSLRHSFQY 449
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 40/284 (14%)
Query: 80 LKACSALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD 138
L+ C +E GR++ E + + +++ D + LI MY+ C + +R VFD++L ++
Sbjct: 114 LQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKN 173
Query: 139 ----------------------------------PSEATLVTVISASADIAALPQGRELH 164
P T +I A + G+ +H
Sbjct: 174 LFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVH 233
Query: 165 GFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST 224
G + + +++ V A++ +Y KCG + A LF+++ E+ ++SWN++I G++ +G
Sbjct: 234 GMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWL 293
Query: 225 KALDLFEKM---KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYT 281
+A F + D + PD T V +L CS G D G M M + +
Sbjct: 294 EAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVG-MVIHGMAVKLGLVHELMVCN 352
Query: 282 CMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
++D+ G L EA L ++ K W +++ + G V
Sbjct: 353 ALIDMYSKCGCLSEAAILFRKIENKSVVS-WNSMIGAYSREGFV 395
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 18/176 (10%)
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
+F + + T L+ MY+ CG +R +F++L K + WNA+++GY + +A+ F
Sbjct: 138 QFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTF 197
Query: 231 EKMKD--EVQPDHITFVGVLSACSRG-----GLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
++ E QPD+ TF ++ AC+ G G ++ D + + M
Sbjct: 198 LELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNA------M 251
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGHVKLAELALEKLIE 337
+ L G G LDEA +L +M P+ + W +L+ +G A A L+E
Sbjct: 252 IALYGKCGFLDEAVELFDKM---PEQNLISWNSLIRGFSENGFWLEAYRAFRSLLE 304
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/545 (38%), Positives = 312/545 (57%), Gaps = 38/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+G + + L+HLYS C + A ++FD +P+++ W+ ++ + G A+ +Y
Sbjct: 137 GYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALAMY 196
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+ E G+ D ++AC + G +H ++R+ DV +L+ MYAK
Sbjct: 197 SRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYAKN 256
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ A QVF + R+ P LV+ +
Sbjct: 257 GHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVSAL 316
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A A + L G+ +HGF R R E + TA++DMY+KCG ++ AR LF +L + +V
Sbjct: 317 LACASVGFLKLGKSIHGFILR-RLEWQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLV 375
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
WNA+I HG AL LF+++ + ++PDH TF +LSA S GL +EG+ +F+ M
Sbjct: 376 LWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRM 435
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
++++ I+P+ +HY C+VDLL SG ++EA D++ M+ +P +W LL+ C + ++L
Sbjct: 436 IKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNKKLEL 495
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E +K++EL P D G ++SN+YA A W+ V ++RKLM D G KK S IEVK
Sbjct: 496 GETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVKG 555
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
HAF+ D SHP EI + L M++ GYVP TE V+HD++ D+ ++ HSER
Sbjct: 556 TRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVPRTEFVYHDLDEDQ---LLSYHSER 612
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGL+NT GTRL+I KNL++C DCH AIK+ISKI +REI VRD R+HHFKDG CS
Sbjct: 613 LAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGACS 672
Query: 508 CGDYW 512
CGDYW
Sbjct: 673 CGDYW 677
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 166/372 (44%), Gaps = 45/372 (12%)
Query: 41 WNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVI 100
WN L+ A++ G A+ ++ R L P++ TF L AC+ L ++ +
Sbjct: 76 WNGLLSAHSRAGAPGAALRVF-RALPSSARPNSTTFTLTLTACARLGDLDAAESVRVRAF 134
Query: 101 RNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----------------PSEA-- 142
+ DVFV +AL+ +Y++C + A +VFD + +D P EA
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194
Query: 143 ---------------TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYA 187
+V VI A G +HG RH ++V T+LV MYA
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254
Query: 188 KCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVG 246
K G + VA +F + + V+W+A+I+G+A +G + +ALDLF +++ D +QP V
Sbjct: 255 KNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVS 314
Query: 247 VLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK 306
L AC+ G G+ ++R ++ T ++D+ G L+ A L ++ +
Sbjct: 315 ALLACASVGFLKLGKSIHGFILR--RLEWQCILGTAVLDMYSKCGSLESARKLFNKLSSR 372
Query: 307 PDPGVWGALLNSCKLH--GHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAK 364
D +W A++ C H GH LA ++P A +LS A + G+ +
Sbjct: 373 -DLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLS-----ALSHSGLVE 426
Query: 365 LRKLMIDRGIKK 376
K DR IK+
Sbjct: 427 EGKFWFDRMIKE 438
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/574 (37%), Positives = 314/574 (54%), Gaps = 74/574 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++ +L+ +Y+ C L +A ++FD + R+L WN++I Y G +E A L+ ++
Sbjct: 155 ISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPN-- 212
Query: 69 LVPDNFTFPFALKACSALSAIEE------------------------------------G 92
DNF++ + C + EE G
Sbjct: 213 --RDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMG 270
Query: 93 RRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD-------------- 138
++IH ++R ++D V +L+DMY KC + AR +FDK+ ERD
Sbjct: 271 KKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKN 330
Query: 139 -------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
P++ T V++A AD+AA G+++H + R F+
Sbjct: 331 GRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAA 390
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQ 238
+ALV MY+KCG ++ A+++FE L + + SW +++ GYA HG KAL FE + K +
Sbjct: 391 SALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTK 450
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
PD I F+GVLSAC+ GL D+G +F S+ + + ++ HY C++DLL +G+ EA
Sbjct: 451 PDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAES 510
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN 358
+I +M +KPD +W ALL C++HG+++LA+ A + L E+EP + YV L+NIYA A
Sbjct: 511 IINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGM 570
Query: 359 WEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKE 418
A +R+ M RGI K SWIE++ + H F GD SHP EI L L RMKE
Sbjct: 571 RAEEANIRETMDSRGIVKKPGMSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKE 630
Query: 419 AGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIA 478
GYVP T V HDVE ++K + HSE+LA+AFG+I+TP GT + + KNL+ C DCH A
Sbjct: 631 VGYVPDTNFVLHDVELEQKEENLSYHSEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNA 690
Query: 479 IKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
IKFIS IT R+I VRD NR+H F+ G CSC DYW
Sbjct: 691 IKFISNITGRKIIVRDSNRFHCFEGGSCSCKDYW 724
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 143/334 (42%), Gaps = 73/334 (21%)
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
A++L YR+ + P + LK C A++EG+++H I+ +++ L+D
Sbjct: 107 AVQLLYRIEK----PYASIYLTLLKFCLKQRALKEGKQVHAH-IKTSGSIGLYISNRLLD 161
Query: 117 MYAKCSCVVNA-------------------------------RQVFDKILERD------- 138
MYAKC +V+A R +FDK+ RD
Sbjct: 162 MYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAI 221
Query: 139 ---------PSEA------------------TLVTVISASADIAALPQGRELHGFSWRHR 171
P EA T+ + ++ASA I +L G+++HG R
Sbjct: 222 ISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMG 281
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
+ + V +L+DMY KCG ++ AR +F+++ E+ VVSW MI Y +G + LF
Sbjct: 282 LDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFR 341
Query: 232 K-MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
M + P+ TF GVL+AC+ D G+ MVR D + +V +
Sbjct: 342 HLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVR-VGFDSFSSAASALVHMYSKC 400
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
G ++ A + ++ +PD W +LL HG
Sbjct: 401 GDIENA-KSVFEILPQPDLFSWTSLLVGYAQHGQ 433
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 146/313 (46%), Gaps = 34/313 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG V+ L+ +Y C + A +FD++ +R++ W +I Y NG E L
Sbjct: 280 MGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFAL 339
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ L+ ++P++FTF L AC+ L+A + G++IH ++R +++ +AL+ MY+K
Sbjct: 340 FRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSK 399
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWR--HRFELNVKV 178
C + NA+ VF+ + + D T + V G HG + H FEL +K
Sbjct: 400 CGDIENAKSVFEILPQPDLFSWTSLLV------------GYAQHGQHDKALHFFELLLKS 447
Query: 179 KT-----ALVDMYAKC---GLVKVARNLFEQLREKRVVS-----WNAMITGYAMHGHSTK 225
T A + + + C GLV F ++EK ++ + +I A G T+
Sbjct: 448 GTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTE 507
Query: 226 ALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP-SVQHYTCMV 284
A + +M ++PD + +L C G + + +S+ + I+P + Y +
Sbjct: 508 AESIINEMP--IKPDKYIWAALLGGCRIHGNLELAKRAAKSL---FEIEPENPATYVTLA 562
Query: 285 DLLGHSG-RLDEA 296
++ +G R +EA
Sbjct: 563 NIYASAGMRAEEA 575
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 23/264 (8%)
Query: 115 IDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL 174
ID+ S + A Q+ +I P + +T++ AL +G+++H + +
Sbjct: 95 IDILCGQSRLREAVQLLYRI--EKPYASIYLTLLKFCLKQRALKEGKQVHA-HIKTSGSI 151
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
+ + L+DMYAKCG + A +F+++ + + SWN MI+GY G+ KA +LF+KM
Sbjct: 152 GLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMP 211
Query: 235 DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRL 293
+ D+ ++ ++S C + +E + M + DY + C + +
Sbjct: 212 NR---DNFSWTAIISGCVQHNRPEEALELYRLMQKHDYS-----KSNKCTISSALAASAA 263
Query: 294 DEACDL-------IMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNY 346
+ + IM+M + D VW +LL+ G ++ A +K +E D ++
Sbjct: 264 IPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDK---MEERDVVSW 320
Query: 347 VILSNIYARAANW-EGVAKLRKLM 369
+ + Y + EG A R LM
Sbjct: 321 TTMIHTYLKNGRREEGFALFRHLM 344
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/546 (36%), Positives = 319/546 (58%), Gaps = 34/546 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG + + L+++YS C + A Q+FD +P R+L WN +I + NG A++L
Sbjct: 93 MGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDL 152
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
++ G FT L AC+A A+ E + +H I+ + +VFV AL+D+YAK
Sbjct: 153 LLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAK 212
Query: 121 CSCVVNARQVFDKILERDP---------------------------------SEATLVTV 147
C + +A VF+ + +R + + +V
Sbjct: 213 CGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSV 272
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
I A A +AA+ +G++++ + F N+ V ++L+DMYAKCG ++ + +F + ++ V
Sbjct: 273 ICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNV 332
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V WNAMI+G + H S + + LFEKM+ + P+ +TFV VLSAC GL +G+ +F+
Sbjct: 333 VLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDL 392
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M +++H+ P+V HY+CMVD L +G++ EA DLI ++ +WG+LL SC+ HG+++
Sbjct: 393 MTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLE 452
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
LAE+A +KL ++EPH++GNY++LSN+YA W+ VAK+RKL+ + +KK SWIE+K
Sbjct: 453 LAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIK 512
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
+K H F+ G+ +HP EIY+KL + +++ GY T+ H V K ++ HSE
Sbjct: 513 DKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVGESIKQELLRHHSE 572
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LA GL+ P + I KNL+IC DCH +K SK R++ VRD NR+HHFK+G C
Sbjct: 573 KLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIVRDTNRFHHFKNGCC 632
Query: 507 SCGDYW 512
SCGD+W
Sbjct: 633 SCGDFW 638
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 143/307 (46%), Gaps = 38/307 (12%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP 139
LK C+ + +G+ H ++ +TD+ LI+MY+KC V ARQVFD++ R
Sbjct: 71 LKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSL 130
Query: 140 ---------------------------------SEATLVTVISASADIAALPQGRELHGF 166
SE T+ +V+ A A AL + + LH F
Sbjct: 131 VSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAF 190
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ + +LNV V TAL+D+YAKCGL+K A +FE + ++ VV+W++M GY + +A
Sbjct: 191 AIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQA 250
Query: 227 LDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
L LF K + ++ D V+ AC+ EG+ +++ ++ + ++D
Sbjct: 251 LALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQ-MNALLSKSGFCSNIFVASSLID 309
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHDA 343
+ G ++E+ + + K + +W A+++ H + EK+ + L P+D
Sbjct: 310 MYAKCGGIEESYKVFRDVE-KRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDV 368
Query: 344 GNYVILS 350
+LS
Sbjct: 369 TFVSVLS 375
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 16/229 (6%)
Query: 91 EGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLV-TVIS 149
+G+RI + + T F + SC+V + K + + + + V ++
Sbjct: 21 KGKRIFQFLSLRVCTTQFFAS------LSSSSCIVECEKPTTK--DFNATHVSFVHEILK 72
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A L QG+ H + ++ L++MY+KCG V AR +F+++ + +VS
Sbjct: 73 LCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVS 132
Query: 210 WNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMV 268
WN MI +G +ALDL +M+ E P T VL AC+ E ++ +
Sbjct: 133 WNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAI 192
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGAL 315
+ +D +V T ++D+ G + +A + M PD V W ++
Sbjct: 193 KAA-MDLNVFVATALLDVYAKCGLMKDAVCVFESM---PDRSVVTWSSM 237
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/537 (39%), Positives = 310/537 (57%), Gaps = 50/537 (9%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNG-PYEVAIELYYRLL-EIGLVPDNFTFPFALKAC 83
A +F+ IP LFL+N LI + + +A LY +L L P++FTFP KAC
Sbjct: 55 AFTIFNHIPNPTLFLYNTLISSLTHHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKAC 114
Query: 84 SALSAIEEGRRIHEDVIRN-KWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---- 138
++ ++ G +H V++ + D FV +L++ YAK + +R +FD+I E D
Sbjct: 115 ASHPWLQHGPPLHAHVLKFLQPPYDPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATW 174
Query: 139 ------------------------------------------PSEATLVTVISASADIAA 156
P+E TLV +ISA +++ A
Sbjct: 175 NTMLAAYAQSASHVSYSTSFEDADMSLEALHLFCDMQLSQIKPNEVTLVALISACSNLGA 234
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
L QG HG+ R+ +LN V TALVDMY+KCG + +A LF++L ++ +NAMI G
Sbjct: 235 LSQGAWAHGYVLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGG 294
Query: 217 YAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
+A+HGH +AL+L+ MK +++ PD T V + ACS GGL +EG FESM + ++P
Sbjct: 295 FAVHGHGNQALELYRNMKLEDLVPDGATIVVTMFACSHGGLVEEGLEIFESMKGVHGMEP 354
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
++HY C++DLLG +GRL EA + + M +KP+ +W +LL + KLHG++++ E AL+ L
Sbjct: 355 KLEHYGCLIDLLGRAGRLKEAEERLQDMPMKPNAILWRSLLGAAKLHGNLEMGEAALKHL 414
Query: 336 IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG 395
IELEP +GNYV+LSN+YA W V ++R LM D G+ K S +E+ H FL+G
Sbjct: 415 IELEPETSGNYVLLSNMYASIGRWNDVKRVRMLMKDHGVDKLPGFSLVEINGAMHEFLTG 474
Query: 396 DASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLI 455
D +HP EIY+K+ + R+ E G+ P T V DVE ++K + + HSERLAIAF LI
Sbjct: 475 DKAHPFSKEIYSKIGEINRRLLEYGHKPRTSEVLFDVEEEDKEDFLSYHSERLAIAFALI 534
Query: 456 NTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ + I KNL++C DCH K IS +R+I VRD NR+HHFKDG CSC DYW
Sbjct: 535 ASSSSMPIRIIKNLRVCGDCHAITKLISAAYQRDIIVRDRNRFHHFKDGSCSCLDYW 591
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 139/321 (43%), Gaps = 55/321 (17%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPY---------- 54
+ P + L++ Y+ L + LFD+I + +L WN ++ AYA + +
Sbjct: 138 YDPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATWNTMLAAYAQSASHVSYSTSFEDA 197
Query: 55 EVAIELYYRLLEIGLV---PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG 111
++++E + ++ L P+ T + ACS L A+ +G H V+RN + + FVG
Sbjct: 198 DMSLEALHLFCDMQLSQIKPNEVTLVALISACSNLGALSQGAWAHGYVLRNNLKLNRFVG 257
Query: 112 AALIDMYAKCSCVVNARQVFDKILERD--------------------------------- 138
AL+DMY+KC C+ A Q+FD++ +RD
Sbjct: 258 TALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALELYRNMKLEDLV 317
Query: 139 PSEATLVTVISASADIAALPQGREL-HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
P AT+V + A + + +G E+ H E ++ L+D+ + G +K A
Sbjct: 318 PDGATIVVTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEE 377
Query: 198 LFEQLREK-RVVSWNAMITGYAMHGH---STKALDLFEKMKDEVQPDHITFVGVLSACSR 253
+ + K + W +++ +HG+ AL +++ E +++ + ++ R
Sbjct: 378 RLQDMPMKPNAILWRSLLGAAKLHGNLEMGEAALKHLIELEPETSGNYVLLSNMYASIGR 437
Query: 254 GGLFDEGRMFFESMVRDYHID 274
RM +++D+ +D
Sbjct: 438 WNDVKRVRM----LMKDHGVD 454
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/547 (37%), Positives = 319/547 (58%), Gaps = 35/547 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
G G + + L +YS C + +A ++F+ +P ++ W +I Y+ G +E A+
Sbjct: 135 FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLA 194
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++++ + D L AC AL A + GR +H V++ +E+D+FVG AL DMY+K
Sbjct: 195 FKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSK 254
Query: 121 CSCVVNARQVF----------------DKILERD------------------PSEATLVT 146
+ +A VF D +E + P+E T +
Sbjct: 255 AGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSS 314
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+I A A+ AAL QG +LH + F+ + V + LVDMY KCGL++ A F+++ +
Sbjct: 315 LIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPT 374
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
++WN++++ + HG A+ FE+M D V+P+ ITF+ +L+ CS GL +EG +F
Sbjct: 375 EIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFY 434
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
SM + Y + P +HY+C++DLLG +GRL EA + I +M +P+ W + L +C++HG
Sbjct: 435 SMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDK 494
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
++ +LA EKL++LEP ++G V+LSNIYA WE V +R M D +KK SW++V
Sbjct: 495 EMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDV 554
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
K H F + D SH IY KL L ++K AGYVP T+SV D+++ K ++ HS
Sbjct: 555 GYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHS 614
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
ER+A+AF LI+ P G +++ KNL++C DCH AIKFISK+T R+I VRD +R+HHF DG
Sbjct: 615 ERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGS 674
Query: 506 CSCGDYW 512
CSCGDYW
Sbjct: 675 CSCGDYW 681
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 180/372 (48%), Gaps = 41/372 (11%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ P L LV++YS C L +A +LFD +PQRNL W +I + N + AI +
Sbjct: 35 GYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTF 94
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G VP F F A++AC++L +IE G+++H ++ +++FVG+ L DMY+KC
Sbjct: 95 CGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKC 154
Query: 122 SCVVNARQVFDKILERDPSEAT---------------------------------LVTVI 148
+ +A +VF+++ +D T L + +
Sbjct: 155 GAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTL 214
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR-V 207
A + A GR +H + FE ++ V AL DMY+K G ++ A N+F E R V
Sbjct: 215 GACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNV 274
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VS+ +I GY K L +F +++ + ++P+ TF ++ AC+ ++G
Sbjct: 275 VSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQ 334
Query: 267 MVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
+++ ++ DP V + +VD+ G G L+ A ++ P W +L++ HG
Sbjct: 335 VMKINFDEDPFVS--SILVDMYGKCGLLEHAIQAFDEIG-DPTEIAWNSLVSVFGQHGLG 391
Query: 326 KLAELALEKLIE 337
K A E++++
Sbjct: 392 KDAIKFFERMVD 403
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/575 (36%), Positives = 327/575 (56%), Gaps = 64/575 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P + +L+ S C + A ++F N++L+ LI + +G Y AI+LY
Sbjct: 76 GHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLY 135
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+L ++PDN+ LKAC + A+ EGR +H ++ ++ V ++++Y KC
Sbjct: 136 SRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKC 195
Query: 122 SCVVNARQ------------------------------VFDKILERD------------- 138
+ +AR+ VF ++ +D
Sbjct: 196 GELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVR 255
Query: 139 --------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
P+E T+V V+SA + + AL GR +H + + ELN+ V
Sbjct: 256 NEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFV 315
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEV 237
AL++MY++CG + A+ +F++++++ V+++N MI+G +M+G S +A++LF M +
Sbjct: 316 GNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRL 375
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
+P ++TFVGVL+ACS GGL D G F SM RDY ++P ++HY CMVDLLG GRL+EA
Sbjct: 376 RPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAY 435
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAA 357
DLI M++ PD + G LL++CK+H +++L E + L + D+G YV+LS++YA +
Sbjct: 436 DLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSG 495
Query: 358 NWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK 417
W+ A++R M + G++K CS IEV N+ H FL GD HP + IY KL+ L ++
Sbjct: 496 KWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEELNRLLR 555
Query: 418 EAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHI 477
GY P E V D+E+ EK + HSERLAI +GLI+T T + + KNL++C DCH
Sbjct: 556 LEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNLRVCYDCHS 615
Query: 478 AIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
AIK I+KIT R++ VRD NR+H+F++G CSCGDYW
Sbjct: 616 AIKLIAKITRRKVVVRDRNRFHYFENGACSCGDYW 650
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/545 (37%), Positives = 312/545 (57%), Gaps = 36/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + + + LV +Y+ C L NA + + + ++ WN L+ + +G E A+ L+
Sbjct: 295 GFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLF 354
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + D++TFP L C S + +H +I+ +E V AL+DMYAK
Sbjct: 355 KNMHGRNMKIDDYTFPSVLNCCVVGSI--NPKSVHGLIIKTGFENYKLVSNALVDMYAKT 412
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ A VF+K+LE+D P + + +++
Sbjct: 413 GDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASIL 472
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A++ L G+++H + + V +LV MYAKCG + A +F ++ K V+
Sbjct: 473 SACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVI 532
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W A+I GYA +G +L ++ M +PD ITF+G+L ACS GL DEGR +F+ M
Sbjct: 533 TWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQM 592
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ Y I P +HY CM+DL G SG+LDEA L+ QM VKPD VW +LL++C++H +++L
Sbjct: 593 NKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLEL 652
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE A L ELEP +A YV+LSN+Y+ + W VAK+RKLM +GI K CSW+E+ +
Sbjct: 653 AERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINS 712
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ + F+S D HP EIY K+ + R+KEAGYVP HD++ + K + HSE+
Sbjct: 713 RVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSFSLHDMDKEGKEVGLAYHSEK 772
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+AFGL+ P + I KNL++C DCH A+K+IS++ R I +RD N +HHF++G CS
Sbjct: 773 LAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAMKYISRVFTRHIILRDSNCFHHFREGECS 832
Query: 508 CGDYW 512
CGDYW
Sbjct: 833 CGDYW 837
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 174/380 (45%), Gaps = 81/380 (21%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY-------- 61
+L++ S +++A +LFD++PQ++ + WN +I +Y G A EL+
Sbjct: 68 TNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSS 127
Query: 62 ----------------------YRLLEI-GLVPDNFTFPFALKACSALSAIEEGRRIHED 98
+R + + G FT L+ CS+L I+ G IH
Sbjct: 128 ITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGF 187
Query: 99 VIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP------------------- 139
V++N +E +VFV L+DMYAKC CV A +F K LE D
Sbjct: 188 VVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLF-KGLEFDRKNHVLWTAMVTGYAQNGDG 246
Query: 140 -----------------SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
++ T T+++A + + A G ++HGF + F NV V++AL
Sbjct: 247 YKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSAL 306
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDH 241
VDMYAKCG +K A+N+ E + + VVSWN+++ G+ HG +AL LF+ M ++ D
Sbjct: 307 VDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDD 366
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHY----TCMVDLLGHSGRLDEAC 297
TF VL+ C G + + V I ++Y +VD+ +G +D A
Sbjct: 367 YTFPSVLNCCVVGSINPKS-------VHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAY 419
Query: 298 DLIMQMRVKPDPGVWGALLN 317
+ +M ++ D W +L+
Sbjct: 420 TVFEKM-LEKDVISWTSLVT 438
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/546 (36%), Positives = 319/546 (58%), Gaps = 34/546 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG + + L+++YS C + A Q+FD +P R+L WN +I + NG A++L
Sbjct: 93 MGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDL 152
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
++ G FT L AC+A A+ E + +H I+ + +VFV AL+D+YAK
Sbjct: 153 LLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAK 212
Query: 121 CSCVVNARQVFDKILERDP---------------------------------SEATLVTV 147
C + +A VF+ + +R + + +V
Sbjct: 213 CGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSV 272
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
I A A +AA+ +G++++ + F N+ V ++L+DMYAKCG ++ + +F + ++ V
Sbjct: 273 ICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNV 332
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V WNAMI+G + H S + + LFEKM+ + P+ +TFV VLSAC GL +G+ +F+
Sbjct: 333 VLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDL 392
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M +++H+ P+V HY+CMVD L +G++ EA DLI ++ +WG+LL SC+ HG+++
Sbjct: 393 MTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLE 452
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
LAE+A +KL ++EPH++GNY++LSN+YA W+ VAK+RKL+ + +KK SWIE+K
Sbjct: 453 LAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIK 512
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
+K H F+ G+ +HP EIY+KL + +++ GY T+ H V K ++ HSE
Sbjct: 513 DKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVGESIKQELLRHHSE 572
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LA GL+ P + I KNL+IC DCH +K SK R++ VRD NR+HHFK+G C
Sbjct: 573 KLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLASKFFCRDVIVRDTNRFHHFKNGCC 632
Query: 507 SCGDYW 512
SCGD+W
Sbjct: 633 SCGDFW 638
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 143/307 (46%), Gaps = 38/307 (12%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP 139
LK C+ + +G+ H ++ +TD+ LI+MY+KC V ARQVFD++ R
Sbjct: 71 LKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSL 130
Query: 140 ---------------------------------SEATLVTVISASADIAALPQGRELHGF 166
SE T+ +V+ A A AL + + LH F
Sbjct: 131 VSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAF 190
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ + +LNV V TAL+D+YAKCGL+K A +FE + ++ VV+W++M GY + +A
Sbjct: 191 AIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQA 250
Query: 227 LDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
L LF K + ++ D V+ AC+ EG+ +++ ++ + ++D
Sbjct: 251 LALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQ-VNALLSKSGFCSNIFVASSLID 309
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHDA 343
+ G ++E+ + + K + +W A+++ H + EK+ + L P+D
Sbjct: 310 MYAKCGGIEESYKVFRDVE-KRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDV 368
Query: 344 GNYVILS 350
+LS
Sbjct: 369 TFVSVLS 375
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 16/229 (6%)
Query: 91 EGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLV-TVIS 149
EG+RI + + T F + SC+V + K + + + + V ++
Sbjct: 21 EGKRIFQFLSLRVCTTQFFAS------LSSSSCIVECEKPTTK--DFNATHVSFVHEILK 72
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A L QG+ H + ++ L++MY+KCG V AR +F+++ + +VS
Sbjct: 73 LCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVS 132
Query: 210 WNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMV 268
WN MI +G +ALDL +M+ E P T VL AC+ E ++ +
Sbjct: 133 WNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAI 192
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGAL 315
+ +D +V T ++D+ G + +A + M PD V W ++
Sbjct: 193 KAA-MDLNVFVATALLDVYAKCGLMKDAVCVFESM---PDRSVVTWSSM 237
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/546 (36%), Positives = 321/546 (58%), Gaps = 35/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G H + L+H+YS C + +A Q+ D +P ++F +N ++ A +G A ++
Sbjct: 158 GLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVL 217
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+++ ++ D+ T+ L C+ + ++ G +IH +++ DVFV + LID Y KC
Sbjct: 218 KRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKC 277
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
V+NAR+ FD + +R+ P+E T ++
Sbjct: 278 GEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLL 337
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A A + AL G LHG F+ ++ V AL++MY+K G + + N+F + + V+
Sbjct: 338 NACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVI 397
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WNAMI GY+ HG +AL +F+ M + P+++TF+GVLSAC L EG +F+ +
Sbjct: 398 TWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQI 457
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI-MQMRVKPDPGVWGALLNSCKLHGHVK 326
++ + ++P ++HYTCMV LLG +G LDEA + + +VK D W LLN+C +H +
Sbjct: 458 MKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYN 517
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
L + E +I+++PHD G Y +LSN++A+A W+GV K+RKLM +R IKK SW++++
Sbjct: 518 LGKQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKIRKLMKERNIKKEPGASWLDIR 577
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
N H F+S ++HP +I+ K++ L +K GY P V HDVE+++K + HSE
Sbjct: 578 NNTHVFVSEGSNHPESTQIFEKVQQLLAMIKPLGYAPDVGVVLHDVEDEQKEGYLSHHSE 637
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LA+A+GL+ P + I KNL++CDDCHIA+K ISK T R I VRD NR+HHF++G+C
Sbjct: 638 KLALAYGLMKIPPPGPIRIIKNLRMCDDCHIAVKLISKATNRLIIVRDANRFHHFREGLC 697
Query: 507 SCGDYW 512
+C D+W
Sbjct: 698 TCNDHW 703
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 174/377 (46%), Gaps = 39/377 (10%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI-GLVP 71
L++LYS C A +LFDR+ QRN+ W+ L+ Y G + L+ L+ + P
Sbjct: 67 LINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYP 126
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
+ + F L C+ ++EG++ H ++++ +V ALI MY++C V +A Q+
Sbjct: 127 NEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQIL 186
Query: 132 D---------------------------KILERDPSE------ATLVTVISASADIAALP 158
D ++L+R E T V+V+ A I L
Sbjct: 187 DTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQ 246
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
G ++H + +V V + L+D Y KCG V AR F+ LR++ VV+W A++T Y
Sbjct: 247 LGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYL 306
Query: 219 MHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
+GH + L+LF KM+ ++ +P+ TF +L+AC+ G + +V + +
Sbjct: 307 QNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLI 366
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
++++ SG +D + ++ M + D W A++ HG K A L + +
Sbjct: 367 VG-NALINMYSKSGNIDSSYNVFSNM-MNRDVITWNAMICGYSHHGLGKQALLVFQDM-- 422
Query: 338 LEPHDAGNYVILSNIYA 354
+ + NYV + +
Sbjct: 423 MSAGECPNYVTFIGVLS 439
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 160/376 (42%), Gaps = 90/376 (23%)
Query: 80 LKACSALSAIEEGRRIHED-VIRNKW--ETDVFVGAALIDMYAKCSCVVNARQVFDKILE 136
LK + ++ G+ IH V+RN+ ++D+ +LI++Y+KC AR++FD++L+
Sbjct: 30 LKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQ 89
Query: 137 RD----------------------------------PSEATLVTVISASADIAALPQGRE 162
R+ P+E V+S AD + +G++
Sbjct: 90 RNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQ 149
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
HG+ + L+ VK AL+ MY++C V A + + + V S+N++++ G
Sbjct: 150 CHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGC 209
Query: 223 STKALDLFEKMKDE-VQPDHITFVGVLSACS-----RGGLFDEGRMFFESMVRDYHI--- 273
+A + ++M DE V D +T+V VL C+ + GL ++ +V D +
Sbjct: 210 RGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSST 269
Query: 274 ----------------------DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV---KPD 308
D +V +T ++ +G +E +L +M + +P+
Sbjct: 270 LIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPN 329
Query: 309 PGVWGALLNSCK----------LHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN 358
+ LLN+C LHG + ++ ++ GN +I N+Y+++ N
Sbjct: 330 EFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIV-------GNALI--NMYSKSGN 380
Query: 359 WEGVAKLRKLMIDRGI 374
+ + M++R +
Sbjct: 381 IDSSYNVFSNMMNRDV 396
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 5/136 (3%)
Query: 131 FDKILERDPSEATLVTVISASADIAALPQGRELHG-FSWRHRFELNVKVK--TALVDMYA 187
F L S +V ++ SA +L G+ +H R++ + + +L+++Y+
Sbjct: 13 FSMYLPHPCSLKEVVNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYS 72
Query: 188 KCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK--DEVQPDHITFV 245
KCG K AR LF+++ ++ VVSW+A++ GY G + L LF + D P+ F
Sbjct: 73 KCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFT 132
Query: 246 GVLSACSRGGLFDEGR 261
VLS C+ G EG+
Sbjct: 133 IVLSCCADSGRVKEGK 148
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/547 (37%), Positives = 317/547 (57%), Gaps = 36/547 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRN--LFLWNVLIRAYAWNGPYEVAIE 59
G+ ++A L+ +Y C + A +FD+I ++N + WN +I AY NG + A+
Sbjct: 54 GYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALH 113
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
L+ + G++ + T A+ AC++L + EEGR +H + + E+D VG +L++M+
Sbjct: 114 LFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFG 173
Query: 120 KCSCVVNARQVFDKILERD---------------------------------PSEATLVT 146
KC V AR VFD + ++ P T +T
Sbjct: 174 KCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLT 233
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+I A A +AA +GR +H ++V + TA++ Y KCG + AR +F+ L +K
Sbjct: 234 IIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKN 293
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V+W+A++ YA +G+ T+A++L+ +M + ++ + ITF+G+L ACS G +G +F
Sbjct: 294 TVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFV 353
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
SM+RD+ + P +HY ++DLLG SG+L + DLI M +PD W ALL +C++HG V
Sbjct: 354 SMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSSAWLALLGACRMHGDV 413
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
E + EL+P D+G Y++LSN+Y+ + + RK M RGI K S IEV
Sbjct: 414 DRGARIAELIYELDPEDSGPYILLSNLYSSTGRMDEARRTRKAMRLRGITKQPGLSSIEV 473
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
K++ H F++ HP I+A+++ L+ R+KEAGYV +V DVE +EK ++ HS
Sbjct: 474 KDRVHEFMAAQKLHPQLGRIHAEIERLKARVKEAGYVADVRAVLRDVEEEEKEQLLWYHS 533
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
ERLAIAFGLI+TP GT L I KNL++C DCH A+K ISK+ R+I VRD R+HHF++G
Sbjct: 534 ERLAIAFGLISTPPGTALHIVKNLRVCFDCHAAVKAISKVVGRKIVVRDAIRFHHFENGA 593
Query: 506 CSCGDYW 512
CSCGDYW
Sbjct: 594 CSCGDYW 600
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 135/286 (47%), Gaps = 38/286 (13%)
Query: 75 TFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI 134
T+ LK C+ A+ EG+R+H ++++ + +D + LI+MY KC + AR VFD+I
Sbjct: 26 TYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQI 85
Query: 135 LERD-----------------------------------PSEATLVTVISASADIAALPQ 159
E++ ++ TL+ I A A + + +
Sbjct: 86 QEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEE 145
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
GR +H + R E + V T+LV+M+ KC V AR +F+ L K +V+WN M+ Y+
Sbjct: 146 GRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQ 205
Query: 220 HGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
+ KA+ +F M E VQPD +TF+ ++ AC+ EGRM + + I V
Sbjct: 206 NWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITAS-GIPMDVA 264
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
T ++ G GRLD A I K + W A+L + +G+
Sbjct: 265 LGTAVMHFYGKCGRLDNA-RAIFDSLGKKNTVTWSAILAAYAQNGY 309
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 86/164 (52%), Gaps = 4/164 (2%)
Query: 136 ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
ER +T V ++ AD AL +G+ +H + + + + L++MY KCG + A
Sbjct: 19 ERREEISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEA 78
Query: 196 RNLFEQLREKR--VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACS 252
R++F+Q++EK V+SWN +I Y +G +AL LF+ M E V + +T + + AC+
Sbjct: 79 RSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACA 138
Query: 253 RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+EGR+ ++ D ++ T +V++ G +D A
Sbjct: 139 SLPSEEEGRI-VHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAA 181
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/524 (38%), Positives = 305/524 (58%), Gaps = 34/524 (6%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L +A ++FD + +RN+ WN ++ E + L+ + E+G +PD FT L+
Sbjct: 39 LDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRG 98
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---- 138
C+ L A G+++H V++ +E ++ VG++L MY K + +V + R+
Sbjct: 99 CAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAW 158
Query: 139 -----------------------------PSEATLVTVISASADIAALPQGRELHGFSWR 169
P + TLV+VIS+SA++A L QG+++H + +
Sbjct: 159 NTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIK 218
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
V V ++L+ MY+KCG ++ + V W++MI Y HG +A+ L
Sbjct: 219 AGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHL 278
Query: 230 FEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
FE+M+ E + + +TF+ +L ACS GL ++G FF+ MV Y + P ++HYTC+VDLLG
Sbjct: 279 FEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLG 338
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
SG LDEA +I M ++ D +W LL++C++H + +A E+++ L P D+ YV+
Sbjct: 339 RSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILRLNPQDSATYVL 398
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAK 408
LSNI+A A W+ V+K+R M DR +KK SW+EVKN+ F GD SHP +EI
Sbjct: 399 LSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMGDKSHPMSEEIDLY 458
Query: 409 LKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKN 468
LK L MK GYVP T +VFHD +++EK N + HSE+LAIAFGL+N P G+ + + KN
Sbjct: 459 LKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAIAFGLMNIPPGSPIRVMKN 518
Query: 469 LKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+IC DCH+AIK IS I REI VRD +R+HHFK G CSCGDYW
Sbjct: 519 LRICSDCHVAIKLISDINNREIIVRDTSRFHHFKHGKCSCGDYW 562
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 3/153 (1%)
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
N+ L++ + + G + A +F+++ E+ V +WNAM++G + L LF +M
Sbjct: 22 NIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMH 81
Query: 235 D-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
+ PD T VL C+ G+ + V Y + ++ + + + SG L
Sbjct: 82 ELGFLPDEFTLGSVLRGCAGLRASYAGKQ-VHAYVLKYGYEFNLVVGSSLAHMYMKSGSL 140
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
E +I MR++ + W L+ +GH +
Sbjct: 141 GEGEKVIKAMRIR-NVVAWNTLIAGNAQNGHFE 172
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/516 (38%), Positives = 307/516 (59%), Gaps = 35/516 (6%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
H VL +V++Y+ C CL +A ++FD +P +++ W LI ++ N A+ L+ ++L
Sbjct: 122 HLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQML 181
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
+GL P++FT LKA + ++ G ++H ++ +++ V+VG+AL+DMYA+C +
Sbjct: 182 RLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMD 241
Query: 126 NARQVFDKILER---------------------------------DPSEATLVTVISASA 152
A+ FD + + P+ T +V SA A
Sbjct: 242 AAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACA 301
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
I AL QG+ +H + +L + L+DMYAK G + A+ +F++L + VVSWN
Sbjct: 302 SIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNT 361
Query: 213 MITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
M+TG A HG + LD FE+M + ++P+ I+F+ VL+ACS GL DEG +FE +++ Y
Sbjct: 362 MLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFE-LMKKY 420
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
++P V HY VDLLG G LD A I +M ++P VWGALL +C++H +++L A
Sbjct: 421 KVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYA 480
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHA 391
E+ EL+PHD+G ++LSNIYA A W VAK+RK+M + G+KK ACSW+E++N H
Sbjct: 481 AERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHL 540
Query: 392 FLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIA 451
F++ D +HP EI K + + G++KE GYVP T V V+ E+ + HSE+LA+A
Sbjct: 541 FVANDETHPQIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALA 600
Query: 452 FGLINTPDGTRLLITKNLKICDDCHIAIKFISKITE 487
F L+NTP G+ + I KN+++C DCH AIKF+SKI E
Sbjct: 601 FALLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKIYE 636
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 158/319 (49%), Gaps = 39/319 (12%)
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAKCSCVVNA 127
LVPD + LK C+ L +E+GR +H ++ + + + + + +++MYAKC C+ +A
Sbjct: 83 LVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDA 142
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
R++FD++ +D P+ TL +++ AS
Sbjct: 143 RRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSE 202
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L G +LH F ++ ++ +V V +ALVDMYA+CG + A+ F+ + K VSWNA+I
Sbjct: 203 HGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALI 262
Query: 215 TGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+G+A G AL L KM + QP H T+ V SAC+ G ++G+ M++ +
Sbjct: 263 SGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKS-GL 321
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
++D+ +G +D+A + ++ VKPD W +L C HG K E
Sbjct: 322 KLIAFIGNTLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTMLTGCAQHGLGKETLDRFE 380
Query: 334 KL--IELEPHDAGNYVILS 350
++ I +EP++ +L+
Sbjct: 381 QMLRIGIEPNEISFLCVLT 399
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 24/235 (10%)
Query: 97 EDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAA 156
+D++R K ++D G +D+ + S V + ++ K+L+ +
Sbjct: 58 KDLLR-KSQSDGGTGLYALDLIQRGSLVPD-YNLYSKLLKE-------------CTRLGK 102
Query: 157 LPQGRELHG-FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+ QGR +H H + ++ ++ +V+MYAKCG + AR +F+++ K +V+W A+I
Sbjct: 103 VEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIA 162
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G++ + AL LF +M + +QP+H T +L A D G + Y
Sbjct: 163 GFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQ-LHAFCLKYGYQ 221
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
SV + +VD+ G +D A M K + W AL++ GH + E
Sbjct: 222 SSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS-WNALIS-----GHARKGE 270
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 74/163 (45%), Gaps = 12/163 (7%)
Query: 221 GHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHY 280
G ALDL ++ + PD+ + +L C+R G ++GR+ +V + +D +
Sbjct: 69 GTGLYALDLIQR--GSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQ 126
Query: 281 TCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--L 338
+V++ G LD+A + +M K D W AL+ + + A L +++ L
Sbjct: 127 NIIVNMYAKCGCLDDARRMFDEMPTK-DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGL 185
Query: 339 EPHDAGNYVILSNIYARAANWEGV---AKLRKLMIDRGIKKSI 378
+P N+ LS++ + + G+ +L + G + S+
Sbjct: 186 QP----NHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSV 224
>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/544 (36%), Positives = 316/544 (58%), Gaps = 55/544 (10%)
Query: 4 GFHPVL--ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ P L AT+LV +Y+ C L +A + D +P+RN+ W +I Y+ N + A EL+
Sbjct: 65 GYRPALYLATRLVIMYARCGALEDARNVLDGMPERNVVSWTAMISGYSQNERPDQAWELF 124
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+L G I + +++H ++ +E +FVG++L+DMYAK
Sbjct: 125 IMMLRAG--------------------IHQVKQVHAFAVKTNFELHMFVGSSLLDMYAKS 164
Query: 122 SCVVNARQVFDKILERDP---------------------------------SEATLVTVI 148
+ AR+VFD + RD ++ T ++
Sbjct: 165 ENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFRLLYNEGMQCNQVTFTALL 224
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A + ++++ G+++HG R + ++ +L+DMY+KCG + +R +F+ + E+ VV
Sbjct: 225 NALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDSMPERSVV 284
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
SWNAM+ GY HG + + + LF M DEV+PD +T + VLS S GGL DEG F+ +V
Sbjct: 285 SWNAMLMGYGRHGLAHEVVQLFRSMCDEVKPDSVTLLAVLSGYSHGGLVDEGLDMFDHIV 344
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
++ + +HY C++DLLG SG+L +A +LI +M +P +WG+LL +C++H +V +
Sbjct: 345 KEQSTLLNTEHYGCVIDLLGRSGQLQKALNLIEKMPFQPTRAIWGSLLGACRVHTNVHVG 404
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
E +KL+++EP +AGNYVILSNIYA A W+ V ++RKLM+ + + K SW+ +
Sbjct: 405 EFVAQKLLDIEPENAGNYVILSNIYAAAGMWKDVFRVRKLMLKKTVIKEPGRSWMILDKV 464
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
H F S + HP ++I AK+K + +K AG+VP V HDV++++K M+ HSE+L
Sbjct: 465 IHTFHSCERFHPRKEDINAKIKEIYVAIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKL 524
Query: 449 AIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
AI FGL++TP + + KNL+IC DCH KF+SK+ REI++RD NR+H +G C+C
Sbjct: 525 AITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKVYGREISLRDKNRFHLITEGACTC 584
Query: 509 GDYW 512
GDYW
Sbjct: 585 GDYW 588
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 132/264 (50%), Gaps = 26/264 (9%)
Query: 79 ALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD 138
A+ C A+ EGR++H ++ + +++ L+ MYA+C + +AR V D + ER+
Sbjct: 41 AITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERN 100
Query: 139 ----------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
P +A + ++ A I Q +++H F+ + FEL++ V ++L
Sbjct: 101 VVSWTAMISGYSQNERPDQAWELFIMMLRAGIH---QVKQVHAFAVKTNFELHMFVGSSL 157
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDH 241
+DMYAK ++ AR +F+ L + VVS+ A+++GY G +ALDLF + +E +Q +
Sbjct: 158 LDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFRLLYNEGMQCNQ 217
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
+TF +L+A S D G+ ++R + + ++D+ G+L + +
Sbjct: 218 VTFTALLNALSGLSSMDYGKQVHGLILRR-ELPFFMALQNSLIDMYSKCGKLLYSRRVFD 276
Query: 302 QMRVKPDPGV--WGALLNSCKLHG 323
M P+ V W A+L HG
Sbjct: 277 SM---PERSVVSWNAMLMGYGRHG 297
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/551 (36%), Positives = 318/551 (57%), Gaps = 40/551 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + V+ + +YS C + A Q+F+++P RNL WN +I + G ++ L+
Sbjct: 135 GFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLF 194
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDV--FVGAALIDMYA 119
R+ G VPD FTF LKAC AL AI G +IH +I + + + +A++D+YA
Sbjct: 195 QRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYA 254
Query: 120 KCSCVVNARQVFDKILERD-----------PSEATLV----------------------T 146
KC + A++VFD+I +++ E L+
Sbjct: 255 KCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSI 314
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ AD+A + QG+++H + + L++ V +++DMY KCGL + A LF +++ +
Sbjct: 315 MMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRN 374
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
VVSW MITGY HG KA+ LF +M+ D ++ D + ++ +LSACS GL E + +F
Sbjct: 375 VVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFS 434
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
+ ++ + P+++HY CMVD+LG +G+L EA +LI M++KP+ G+W LL++C++HG++
Sbjct: 435 RLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNL 494
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
++ E L ++ + NYV++SNIYA A W+ ++RKL+ +G+KK SW+E+
Sbjct: 495 EIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEI 554
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK-EAGYVPGTESVFHDVENDEKANMICCH 444
+ H F GD +HP ++I+ LK +E R+K E GY G HDVE + K + H
Sbjct: 555 NKEIHFFYGGDDTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFALHDVEEESKEENLRVH 614
Query: 445 SERLAIAFGLI---NTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF 501
SE+LAI L+ G + + KNL++C DCH IK +SKI ++ VRD NR+H F
Sbjct: 615 SEKLAIGLALVCDGMEKKGGVIRVFKNLRVCGDCHEFIKGLSKILKKVFVVRDANRFHRF 674
Query: 502 KDGICSCGDYW 512
+DG+CSCGDYW
Sbjct: 675 EDGLCSCGDYW 685
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 128/281 (45%), Gaps = 36/281 (12%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
L+ CS ++G ++H + + D+ + LIDMY KCS V A VFD++LER+
Sbjct: 11 LRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNV 70
Query: 139 --------------------------------PSEATLVTVISASADIAALPQGRELHGF 166
P+E T T + A + + G ++HG
Sbjct: 71 VSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGM 130
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ FE V A +DMY+KCG + +A +F ++ + +VSWNAMI G+ G+ K+
Sbjct: 131 CVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKS 190
Query: 227 LDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESMV-RDYHIDPSVQHYTCMV 284
L LF++M+ + + PD TF L AC G G S++ R + I + +V
Sbjct: 191 LVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIV 250
Query: 285 DLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
DL G L EA + ++ K + W AL+ G++
Sbjct: 251 DLYAKCGYLFEAQKVFDRIEQK-NLISWSALIQGFAQEGNL 290
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/546 (38%), Positives = 320/546 (58%), Gaps = 35/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + T LV +Y+ C +H+A ++FD++P+RNL WN +I + N Y+ A+ ++
Sbjct: 275 GFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVF 334
Query: 62 YRLL-EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+L E ++P+ + L AC+ + + GR++H V++ +V +L+DMY K
Sbjct: 335 KDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFK 394
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C ++F + +RD P EA+ TV
Sbjct: 395 CRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTV 454
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ +SA +AAL QG +H + + N+ + +L+ MYAKCG + A +FE + + V
Sbjct: 455 LHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNV 514
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
+SW AMI+ Y +HG + + ++LFE M E ++P H+TFV VLSACS G +EG F S
Sbjct: 515 ISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNS 574
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M + + ++P +HY CMVDLLG +G LDEA I M +KP P VWGALL +C+ +G++K
Sbjct: 575 MKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLK 634
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
+ A E+L E+EP++ GNYV+L+N+ R+ E ++R+LM G++K CSWI+VK
Sbjct: 635 MGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVK 694
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
N F + D SH + DEIY L+ LE +K+ GYV TE V + +E +E+ + HSE
Sbjct: 695 NMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSE 754
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LA+AFGL+ P + + I KNL+ C CH +K SKI +REI VRD+NR+H F DG C
Sbjct: 755 KLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFC 814
Query: 507 SCGDYW 512
SCGDYW
Sbjct: 815 SCGDYW 820
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 183/403 (45%), Gaps = 45/403 (11%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQ--RNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
P L L++LY+ C CL+ A LF + + W LI + + A+ L+ ++
Sbjct: 177 PFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLSHFNMHLQALSLFNQM 236
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
G P+ FTF L A +A + G+++H + ++ ++ ++FVG AL+DMYAKC+ +
Sbjct: 237 RCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADM 296
Query: 125 VNARQVFDKILERD----------------------------------PSEATLVTVISA 150
+A +VFD++ ER+ P+E ++ +V+SA
Sbjct: 297 HSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSA 356
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
A++ L GR++HG ++ V +L+DMY KC LF+ + ++ VV+W
Sbjct: 357 CANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTW 416
Query: 211 NAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
N ++ G+ + +A + F M+ E + PD +F VL + + +G + +++
Sbjct: 417 NVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIK 476
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGHV-K 326
+ V++ + L+ + D D V W A++++ +LHG +
Sbjct: 477 LGY----VKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQ 532
Query: 327 LAELALEKLIE-LEPHDAGNYVILSNIYARAANWEGVAKLRKL 368
+ EL L E +EP +LS EG+A +
Sbjct: 533 VIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSM 575
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 117/250 (46%), Gaps = 38/250 (15%)
Query: 88 AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD--------------- 132
+++ +IH +I N + + F+ LI++YAKC C+ A +F
Sbjct: 157 SLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSL 216
Query: 133 --------------------KILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
+ P++ T +++SASA + G++LH +H F
Sbjct: 217 ITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGF 276
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
+ N+ V TALVDMYAKC + A +F+Q+ E+ +VSWN+MI G+ + +A+ +F+
Sbjct: 277 DANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKD 336
Query: 233 MKDE--VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+ E V P+ ++ VLSAC+ G + GR +V+ Y + P ++D+
Sbjct: 337 VLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVK-YGLVPLTYVMNSLMDMYFKC 395
Query: 291 GRLDEACDLI 300
DE L
Sbjct: 396 RFFDEGVKLF 405
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/544 (36%), Positives = 316/544 (58%), Gaps = 34/544 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F + ++ + Y+ C L A +F + +++ WN +I +A NG A++ Y+
Sbjct: 447 FQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYF 506
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+ +G++PD+F+ L AC L ++ G+ IH V+RN E + FV +L+ +Y CS
Sbjct: 507 EMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCS 566
Query: 123 CVVNARQVFDKILER---------------------------------DPSEATLVTVIS 149
R F+ + ++ +P E + +++
Sbjct: 567 KPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILG 626
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A + ++AL G+E+H F+ ++ + V +L+DMYAK G + ++ +F +L K V S
Sbjct: 627 ACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVAS 686
Query: 210 WNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WN MITG+ +HG KA++LFE MK + QPD TF+GVL AC GL EG + M
Sbjct: 687 WNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQ 746
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
Y ++P ++HY C++D+LG +GRL+EA + I +M +PD +W +LL+S + +++
Sbjct: 747 TLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMG 806
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
E EKL+ LE + A +Y++LSN+YA A W+ V +R+ M D ++K + CSWIE++ K
Sbjct: 807 EKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGK 866
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
++F++G+ S+P+ DEI LE ++ E GY P V H++E EK ++ HSE++
Sbjct: 867 VYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKV 926
Query: 449 AIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
AI FG +NT +GT L I+KNL+IC DCH A K+ISK +REI +RD R+HHFK GICSC
Sbjct: 927 AICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSC 986
Query: 509 GDYW 512
GDYW
Sbjct: 987 GDYW 990
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 142/299 (47%), Gaps = 38/299 (12%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG + ++ LY C L A +LFD++P++NL WN LIR ++ NG + A
Sbjct: 239 MGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRA 298
Query: 61 YYRLLEIG--LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
+ LLE G L+PD T L CS ++ G IH ++ ++ V ALIDMY
Sbjct: 299 FRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMY 358
Query: 119 AKCSCVVNARQVFDKILER-----------------------------------DPSEAT 143
+KC C+ A +F KI + + +E T
Sbjct: 359 SKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVT 418
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
++ ++ A + + L R LHG+S RH F+ + A + YAKCG + A ++F +
Sbjct: 419 ILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMN 478
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDL-FEKMKDEVQPDHITFVGVLSACSRGGLFDEGR 261
K V SWNA+I G+A +G KALD FE + + PD + V +L AC R GL G+
Sbjct: 479 TKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGK 537
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 148/311 (47%), Gaps = 44/311 (14%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL T+L+ +YS C + +FDR+ +NLF WN L+ Y N Y+ AI + L+ +
Sbjct: 144 VLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISV 203
Query: 68 G-LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
PDNFTFP +KAC+ I G+ +H ++ D+FVG A+I +Y KC +
Sbjct: 204 TEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDE 263
Query: 127 ARQVFDKILERD-----------------------------------PSEATLVTVISAS 151
A ++FDK+ E++ P AT+VT++
Sbjct: 264 AVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVC 323
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+ + G +HG + + + V AL+DMY+KCG + A LF ++ K VVSWN
Sbjct: 324 SGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWN 383
Query: 212 AMITGYAMHGHSTKALDLFEKM---KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
+MI Y+ G + DL KM ++ ++ + +T + +L AC +E + +
Sbjct: 384 SMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPAC-----LEESELLSLRAL 438
Query: 269 RDYHIDPSVQH 279
Y + S Q+
Sbjct: 439 HGYSLRHSFQY 449
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 40/284 (14%)
Query: 80 LKACSALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD 138
L+ C +E GR++ E + + +++ D + LI MY+ C + +R VFD++L ++
Sbjct: 114 LQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKN 173
Query: 139 ----------------------------------PSEATLVTVISASADIAALPQGRELH 164
P T +I A + G+ +H
Sbjct: 174 LFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVH 233
Query: 165 GFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST 224
G + + +++ V A++ +Y KCG + A LF+++ E+ ++SWN++I G++ +G
Sbjct: 234 GMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWL 293
Query: 225 KALDLFEKM---KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYT 281
+A F + D + PD T V +L CS G D G M M + +
Sbjct: 294 EAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVG-MVIHGMAVKLGLVHELMVCN 352
Query: 282 CMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
++D+ G L EA L ++ K W +++ + G V
Sbjct: 353 ALIDMYSKCGCLSEAAILFRKIENKSVVS-WNSMIGAYSREGFV 395
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 18/176 (10%)
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
+F + + T L+ MY+ CG +R +F++L K + WNA+++GY + +A+ F
Sbjct: 138 QFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTF 197
Query: 231 EKMKD--EVQPDHITFVGVLSACSRG-----GLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
++ E QPD+ TF ++ AC+ G G ++ D + + M
Sbjct: 198 LELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNA------M 251
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGHVKLAELALEKLIE 337
+ L G G LDEA +L +M P+ + W +L+ +G A A L+E
Sbjct: 252 IALYGKCGFLDEAVELFDKM---PEQNLISWNSLIRGFSENGFWLEAYRAFRSLLE 304
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/505 (41%), Positives = 303/505 (60%), Gaps = 11/505 (2%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T +V Y+ L A ++FD +P +N WN ++ AY E A EL+ + +
Sbjct: 328 TAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVA 387
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
N L + ++E R I + + D AA++ Y++ Q+
Sbjct: 388 SWNTM----LTGYAQAGMLDEARAIFGMMP----QKDAVSWAAMLAAYSQIGFSEETLQL 439
Query: 131 FDKILERDP--SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
F ++ + + V+S ADIAAL G +LH + + + V AL+ MY K
Sbjct: 440 FKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFK 499
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGV 247
CG ++ A + FE++ E+ VVSWN MI GYA HG +AL++F+ M K +PD IT VGV
Sbjct: 500 CGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGV 559
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
L+ACS GL ++G +F SM RD+ + +HYTCM+DLLG +GRLDEA +L+ M +P
Sbjct: 560 LAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEP 619
Query: 308 DPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRK 367
D +WGALL + ++H + +L A EK+ ELEP +AG YV+LSNIYA + W V K+R
Sbjct: 620 DSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRH 679
Query: 368 LMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTES 427
+M +RG+KK SWIEV+NK H F GD+ HP ++IYA L+ L+ RMK+AGYV T+
Sbjct: 680 IMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDM 739
Query: 428 VFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITE 487
V HDVE +EK +M+ HSE+LA+A+G++ P G + + KNL++C DCH A K IS I
Sbjct: 740 VLHDVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEG 799
Query: 488 REITVRDVNRYHHFKDGICSCGDYW 512
R I +RD NR+HHF+DG CSCGDYW
Sbjct: 800 RLIILRDSNRFHHFRDGSCSCGDYW 824
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 150/343 (43%), Gaps = 53/343 (15%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+A +LF +P+R+ +N ++ YA NG A+ + + PD+F++ L A
Sbjct: 125 DAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPR----PDSFSYNTLLHALG 180
Query: 85 ALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEAT 143
S++ + R + +++ +++ +V +I +A V AR FD E+D +
Sbjct: 181 VSSSLADVRALFDEMPVKDSVSYNV-----MISSHANHGLVSLARHYFDLAPEKDA--VS 233
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
+++A + + REL + R E + AL+ Y + ++ A+ +F ++
Sbjct: 234 WNGMLAAYVRNGRIQEAREL----FDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMP 289
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP--DHITFVGVLSACSRGGLFDEGR 261
++ VVSWN M++GYA G +A LF +V P D T+ ++S ++ G+ +E +
Sbjct: 290 QRDVVSWNTMVSGYARRGDMAEARRLF-----DVAPIRDVFTWTAIVSGYAQNGMLEEAK 344
Query: 262 MFFESMVRDYHID--------------------------PSVQHYTCMVDLLGHSGRLDE 295
F++M + +V + M+ +G LDE
Sbjct: 345 RVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDE 404
Query: 296 ACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
A I M + D W A+L + + + +E L+ E+
Sbjct: 405 A-RAIFGMMPQKDAVSWAAMLAA---YSQIGFSEETLQLFKEM 443
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 121/262 (46%), Gaps = 31/262 (11%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+H L + LFD +P ++ +NV+I ++A +G + L ++ D
Sbjct: 175 LLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHG----LVSLARHYFDLAPEKD 230
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
++ L A I+E R + + R +W D AL+ Y + S + A+++F+
Sbjct: 231 AVSWNGMLAAYVRNGRIQEARELFDS--RTEW--DAISWNALMAGYVQRSQIEEAQKMFN 286
Query: 133 KILERDPSEATLVTVISASADIAALPQGRELHG-------FSWRHRFELNVKVKTALVDM 185
K+ +RD + T++S A + + R L F+W TA+V
Sbjct: 287 KMPQRDV--VSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTW-----------TAIVSG 333
Query: 186 YAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFV 245
YA+ G+++ A+ +F+ + +K VSWNAM+ Y +A +LF+ M + ++
Sbjct: 334 YAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCR---NVASWN 390
Query: 246 GVLSACSRGGLFDEGRMFFESM 267
+L+ ++ G+ DE R F M
Sbjct: 391 TMLTGYAQAGMLDEARAIFGMM 412
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+G + L+ +Y C + AH F+ + +R++ WN +I YA +G + A+E++
Sbjct: 482 GYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVF 541
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ + PD+ T L ACS +E+G
Sbjct: 542 DTMRKTSTKPDDITLVGVLAACSHSGLVEKG 572
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 90/222 (40%), Gaps = 36/222 (16%)
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
++ V + + + + G V A LF + + ++N M+ GYA +G +AL F
Sbjct: 104 DMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRS 163
Query: 233 MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM-VRD---YHIDPSVQHYTCMVDLLG 288
+ +PD ++ +L A + R F+ M V+D Y++ S +V L
Sbjct: 164 IP---RPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLAR 220
Query: 289 H----------------------SGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
H +GR+ EA +L R + D W AL+ ++
Sbjct: 221 HYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELF-DSRTEWDAISWNALMAGYVQRSQIE 279
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKL 368
A+ K+ + D ++ + + YAR + +A+ R+L
Sbjct: 280 EAQKMFNKMPQ---RDVVSWNTMVSGYARRGD---MAEARRL 315
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/544 (36%), Positives = 309/544 (56%), Gaps = 34/544 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F + +LA V Y+ C L A ++F I + L WN LI YA + ++++ +
Sbjct: 410 FVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHL 469
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
++ GL+PDNFT L ACS L ++ G+ +H +IRN E D+FV +++ +Y C
Sbjct: 470 QMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 529
Query: 123 CVVNARQVFDKILER---------------------------------DPSEATLVTVIS 149
+ + +FD + + P +++TV
Sbjct: 530 ELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFG 589
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A + + +L GRE H ++ +H E N + +++DMYAK G + + +F L+EK S
Sbjct: 590 ACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAAS 649
Query: 210 WNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WNAMI GY MHG + +A+ LFE+M+ + PD +TF+GVL+AC+ GL EG + + M
Sbjct: 650 WNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMK 709
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ + P+++HY C++D+LG +G+LD A + +M +PD G+W +LL+ C++H ++++
Sbjct: 710 SSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMG 769
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
E KL LEP NYV+LSN+YA W+ V ++R+ M + ++K CSWIE+ K
Sbjct: 770 EKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGK 829
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
+F+ G+ +EI + LE ++ + GY P T SV HD+ +EK + HSE+L
Sbjct: 830 VFSFVVGERFLDGFEEIKSLWSILEMKIWKMGYRPDTSSVQHDLSEEEKIEQLRGHSEKL 889
Query: 449 AIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
AI +GLI T +GT L + KNL+IC DCH A K ISK+ EREI VRD R+HHF G CSC
Sbjct: 890 AITYGLIKTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFNKGFCSC 949
Query: 509 GDYW 512
GDYW
Sbjct: 950 GDYW 953
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 144/277 (51%), Gaps = 30/277 (10%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-E 66
VL T+++ +Y+ C ++ FD + +NLF WN +I +Y+ N Y +E++ +++ +
Sbjct: 121 VLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISK 180
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
L+PDNFTFP +KAC+ +S + G +H V++ D+FVG AL+ Y V +
Sbjct: 181 THLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSD 240
Query: 127 ARQVFDKILERD---------------------PSEATLVTVISASADIAALPQGRELHG 165
A ++FD + ER+ P AT+VTV+ A + G+ +HG
Sbjct: 241 ALKLFDIMPERNLVSWNSMIRVFSDNGDDGAFMPDVATVVTVLPVCAREREIGVGKGVHG 300
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
++ + + + V AL+DMY+K G + ++ +F+ K VVSWN M+ G++ G
Sbjct: 301 WAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHG 360
Query: 226 ALDLFEKM---KDEVQPDHITFVGVLSACSRGGLFDE 259
DL +M ++V+ D +T + + C FDE
Sbjct: 361 TFDLLRQMLAGSEDVKADEVTILNAVPVC-----FDE 392
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 143/321 (44%), Gaps = 49/321 (15%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ LV Y + +A +LFD +P+RNL WN +IR ++ NG +
Sbjct: 224 VGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGD------------DGA 271
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+PD T L C+ I G+ +H ++ + ++ V AL+DMY+K C+++++
Sbjct: 272 FMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQ 331
Query: 129 QVFDKILERD-----------------------------------PSEATLVTVISASAD 153
+F ++ E T++ + D
Sbjct: 332 MIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFD 391
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+ LP +ELH +S + F + + A V YAKCG + A+ +F +R K + SWNA+
Sbjct: 392 ESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNAL 451
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I GYA +LD +MK+ + PD+ T +LSACS+ G+ ++R++
Sbjct: 452 IGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNW- 510
Query: 273 IDPSVQHYTCMVDLLGHSGRL 293
++ + Y ++ L H G L
Sbjct: 511 LERDLFVYLSVLSLYIHCGEL 531
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/548 (38%), Positives = 319/548 (58%), Gaps = 38/548 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNG-PYEVAIEL 60
GF L T+L+ + A Q+FD + + +FLWN L + Y N P+E ++ L
Sbjct: 38 GFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFE-SLLL 96
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
Y ++ ++G+ PD FT+PF +KA S L G +H V++ + V L+ MY K
Sbjct: 97 YKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMK 156
Query: 121 CSCVVNARQVFDKILERDP---------------------------------SEATLVTV 147
+ +A +F+ + +D T+V++
Sbjct: 157 FGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSM 216
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+SA + +L G E++ + + + N+ V+ A +DM+ KCG + AR LFE+++++ V
Sbjct: 217 LSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNV 276
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSW+ MI GYAM+G S +AL LF M++E ++P+++TF+GVLSACS GL +EG+ +F
Sbjct: 277 VSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSL 336
Query: 267 MVR--DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
MV+ D +++P +HY CMVDLLG SG L+EA + I +M V+PD G+WGALL +C +H
Sbjct: 337 MVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRD 396
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
+ L + + L+E P +V+LSNIYA A W+ V K+R M G KK A S +E
Sbjct: 397 MILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVE 456
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
+ K H F GD SHP IY KL + ++++ GYVP T SVFHDVE +EK + H
Sbjct: 457 FEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHH 516
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SE+LAIAFGLI G + + KNL+ CDDCH KF+S +T EI +RD NR+HHF++G
Sbjct: 517 SEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNG 576
Query: 505 ICSCGDYW 512
+CSC ++W
Sbjct: 577 VCSCKEFW 584
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 6/226 (2%)
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
Q +++H R F + T L++ G + AR +F+++ + R+ WN + GY
Sbjct: 26 QLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYV 85
Query: 219 MHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
+ ++L L++KM+D V+PD T+ V+ A S+ G F G +V+ Y
Sbjct: 86 RNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVK-YGFGCLG 144
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
T +V + G L A L M+VK D W A L C G+ +A K+
Sbjct: 145 IVATELVMMYMKFGELSSAEFLFESMQVK-DLVAWNAFLAVCVQTGNSAIALEYFNKMCA 203
Query: 338 LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
+ ++ ++S + A G ++ + + DR K+ I C+ I
Sbjct: 204 -DAVQFDSFTVVSML--SACGQLGSLEIGEEIYDRARKEEIDCNII 246
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/539 (40%), Positives = 314/539 (58%), Gaps = 35/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L TKL+ L A + +LF + + FL+N LI+A + G A+ Y R+L
Sbjct: 44 LLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSNFGFSLDAVFFYRRMLHSR 103
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+VP +TF +KAC+ LS + G +H V + + ++ FV AAL+ YAK AR
Sbjct: 104 IVPSTYTFTSVIKACADLSLLRLGTIVHSHVFVSGYASNSFVQAALVTFYAKSCTPRVAR 163
Query: 129 QVFDKILER---------------------------------DPSEATLVTVISASADIA 155
+VFD++ +R +P AT V+V+SA + +
Sbjct: 164 KVFDEMPQRSIIAWNSMISGYEQNGLASEAVEVFNKMRESGGEPDSATFVSVLSACSQLG 223
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+L G LH +NV + T+LV+M+++CG V AR +F+ + E VVSW AMI+
Sbjct: 224 SLDLGCWLHECIVGTGIRMNVVLATSLVNMFSRCGDVGRARAVFDSMNEGNVVSWTAMIS 283
Query: 216 GYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GY MHG+ +A+++F +MK V P+ +T+V VLSAC+ GL +EGR+ F SM ++Y +
Sbjct: 284 GYGMHGYGVEAMEVFHRMKACGVVPNRVTYVAVLSACAHAGLINEGRLVFASMKQEYGVV 343
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP-DPGVWGALLNSCKLHGHVKLAELALE 333
P V+H+ CMVD+ G G L+EA + + + P VW A+L +CK+H + L E
Sbjct: 344 PGVEHHVCMVDMFGRGGLLNEAYQFVRGLSSEELVPAVWTAMLGACKMHKNFDLGVEVAE 403
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
LI EP + G+YV+LSN+YA A + V +R +MI RG+KK + S I+V+N+++ F
Sbjct: 404 NLISAEPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVENRSYLFS 463
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD SHP +EIY L L R K+AGY P ES H++E +E+ + HSE+LA+AFG
Sbjct: 464 MGDKSHPETNEIYCYLDELMWRCKDAGYAPAPESAMHELEEEEREYALRYHSEKLAVAFG 523
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+ T G L I KNL+IC+DCH AIKFIS + REI VRD R+HHF++G CSC DYW
Sbjct: 524 LMKTCHGVTLRIVKNLRICEDCHSAIKFISVVMNREIIVRDKLRFHHFREGSCSCSDYW 582
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/578 (35%), Positives = 321/578 (55%), Gaps = 68/578 (11%)
Query: 3 FGFH---PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIE 59
FGF P + + L+ +Y+AC + +A LFD++ R++ WN++I Y+ N Y+ ++
Sbjct: 144 FGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLK 203
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
LY + G PD L AC+ + G+ IH+ + N + + +L++MYA
Sbjct: 204 LYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYA 263
Query: 120 KCSC-------------------------------VVNARQVFDKILERD---------- 138
C V +AR +FD+++E+D
Sbjct: 264 NCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISG 323
Query: 139 -----------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELN 175
P + T+++VISA A++ AL Q + +H ++ ++ F
Sbjct: 324 YAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRT 383
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD 235
+ + AL+DMYAKCG + AR +FE + K V+SW++MI +AMHG + A+ LF +MK+
Sbjct: 384 LPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKE 443
Query: 236 E-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLD 294
+ ++P+ +TF+GVL ACS GL +EG+ FF SM+ ++ I P +HY CMVDL + L
Sbjct: 444 QNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLR 503
Query: 295 EACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYA 354
+A +LI M P+ +WG+L+++C+ HG ++L E A +L+ELEP G V+LSNIYA
Sbjct: 504 KAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYA 563
Query: 355 RAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEG 414
+ W+ V +RKLM +G+ K ACS IEV N+ H F+ D H DEIY KL +
Sbjct: 564 KEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVS 623
Query: 415 RMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDD 474
++K GY P T + D+E +EK ++ HSE+LA+ +GLI + + I KNL+IC+D
Sbjct: 624 QLKLVGYTPSTSGILVDLEEEEKKEVVLWHSEKLALCYGLIGERKESCIRIVKNLRICED 683
Query: 475 CHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
CH +K +SK+ EI +RD R+HHF GICSC DYW
Sbjct: 684 CHSFMKLVSKVHRIEIVMRDRTRFHHFNGGICSCRDYW 721
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 167/387 (43%), Gaps = 70/387 (18%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L A LF IP N L+R ++ E + LY L G D F+FP LKA
Sbjct: 65 LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKA 124
Query: 83 CSALSAIEEGRRIHEDVIR-NKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD--- 138
S LSA+ G IH + + D F+ +ALI MYA C +++AR +FDK+ RD
Sbjct: 125 VSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVT 184
Query: 139 ------------------------------PSEATLVTVISASADIAALPQGRELHGFSW 168
P L TV+SA A L G+ +H F
Sbjct: 185 WNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIK 244
Query: 169 RHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR------------------------- 203
+ F + ++T+LV+MYA CG + +AR +++QL
Sbjct: 245 DNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARF 304
Query: 204 ------EKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGL 256
EK +V W+AMI+GYA +AL LF +M + + PD IT + V+SAC+ G
Sbjct: 305 IFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGA 364
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
+ + + + ++ ++D+ G L +A ++ M K + W +++
Sbjct: 365 LVQAK-WIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRK-NVISWSSMI 422
Query: 317 NSCKLHGHVKLAELALEKLIE--LEPH 341
N+ +HG A ++ E +EP+
Sbjct: 423 NAFAMHGDADSAIALFHRMKEQNIEPN 449
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + L+ +Y+ C L A ++F+ +P++N+ W+ +I A+A +G + AI L+
Sbjct: 379 GFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALF 438
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVI 100
+R+ E + P+ TF L ACS +EEG++ +I
Sbjct: 439 HRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMI 477
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/574 (36%), Positives = 335/574 (58%), Gaps = 69/574 (12%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDR-IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
++A K + + S+ L ++ +F+ + N+F +N L++A++ + + I + L
Sbjct: 59 IIAVKFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLV 118
Query: 67 I--GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK--CS 122
+ PD +TF LKAC+ L+ + EG+++H V + E+++FV +L+D+Y K C+
Sbjct: 119 LPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCN 178
Query: 123 CVVN-----------------------------ARQVFDKILERD--------------- 138
C+ AR VFD ++E++
Sbjct: 179 CIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNE 238
Query: 139 -------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
P++ TLV+V+SA A + AL G+ +H F R++ E+ + +
Sbjct: 239 KYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLG 298
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQ 238
AL DMYAKCG V A+ +F ++ E+ V+SW+ +I G AM+G++ +A + F +M +D ++
Sbjct: 299 NALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLE 358
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
P+ I+F+G+L+AC+ GL D+G +F+ M + Y I P ++HY C+VDLL +GRLD+A
Sbjct: 359 PNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAES 418
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN 358
LI M ++P+ VWGALL C+++ + E + +++EL+ + +G+ V L+N+YA
Sbjct: 419 LINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGR 478
Query: 359 WEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKE 418
+ A R M D K+ CSWIE+ N + F GD+SHP IY+ ++ L+ +MK
Sbjct: 479 LDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKV 538
Query: 419 AGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIA 478
AGY P T+ V H+++ +EK + + HSE+LA+AFGLINT +GT + I KNL++C+DCH A
Sbjct: 539 AGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDA 598
Query: 479 IKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
IK ISKI EREI VRD +R+HHFKDG CSC DYW
Sbjct: 599 IKIISKIVEREIVVRDRSRFHHFKDGKCSCNDYW 632
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/539 (38%), Positives = 307/539 (56%), Gaps = 42/539 (7%)
Query: 12 KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
L+ YS CDCL +LF + +R+ +NV+I YAWN + + L+ + +
Sbjct: 280 SLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSF-- 337
Query: 72 DNFTFPFA--LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS------- 122
D P+A L ++ I G++IH ++ ++ VG ALIDMY+KC
Sbjct: 338 DRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKT 397
Query: 123 -------------------CVVNARQVFDKILER---------DPSEATLVTVISASADI 154
CV N +Q ++ L+ P AT + I AS+++
Sbjct: 398 NFINKNDKTGVSWTAMITGCVQNGQQ--EEALQLFCGMRRAGLSPDRATFSSTIKASSNL 455
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
A + GR+LH + R +V +AL+DMY KCG + A F+++ E+ +SWNA+I
Sbjct: 456 AMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVI 515
Query: 215 TGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+ YA +G + A+ +FE M +PD +TF+ VLSACS GL +E +FE M +Y I
Sbjct: 516 SAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGI 575
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P +HY+C++D LG GR D+ +++ +M + DP +W ++L+SC+ HG+ LA +A E
Sbjct: 576 SPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAE 635
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
KL + DA YVILSNI+A+A WE A ++K+M DRG++K SW+EVK+K ++F
Sbjct: 636 KLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFS 695
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
S D ++P EI +L+ L M + GY P T V++D K + HSERLAIAF
Sbjct: 696 SNDQTNPMITEIKDELERLYKEMDKQGYKPDTSCTLQQVDDDIKLESLKYHSERLAIAFA 755
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LINTP GT + + KNL C DCH AIK +SKI R+I VRD +R+HHFKDG CSCGDYW
Sbjct: 756 LINTPPGTPIRVMKNLSACVDCHSAIKMMSKIVNRDIIVRDSSRFHHFKDGFCSCGDYW 814
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 164/363 (45%), Gaps = 37/363 (10%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+ L+ Y L A ++F +P R+ +N ++ + G + A++L+ +
Sbjct: 176 VVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRK 235
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
GL FTF L + + + GR++H V R ++VFV +L+D Y+KC C+
Sbjct: 236 GLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARAT-SSNVFVNNSLLDFYSKCDCLDEM 294
Query: 128 RQVFDKILERDPSE-------------ATLVTVI-----SASADIAALPQ---------- 159
+++F +++ERD A++V + S S D ALP
Sbjct: 295 KKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSV 354
Query: 160 -----GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
G+++H V AL+DMY+KCG++ A+ F +K VSW AMI
Sbjct: 355 PHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMI 414
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
TG +G +AL LF M+ + PD TF + A S + GR ++R H+
Sbjct: 415 TGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHM 474
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
SV + ++D+ G LDEA +M + + W A++++ +G K A E
Sbjct: 475 S-SVFSGSALLDMYTKCGCLDEALQTFDEMPER-NSISWNAVISAYAHYGQAKNAIKMFE 532
Query: 334 KLI 336
++
Sbjct: 533 GML 535
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 45/268 (16%)
Query: 4 GFHPVL--ATKLVHLYSACDCLHNAHQLFDRIPQRN-LFLWNVLIRAYAWNGPYEVAIEL 60
GF P L+H + L A LFD++P RN F N ++ Y+ +G A L
Sbjct: 29 GFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSAAHHL 88
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ LS+ +R+ V +GA A+
Sbjct: 89 F------------------------LSSPPH--------LRDAVTWTVMIGAFASAPGAR 116
Query: 121 CSCVVNARQVFDKILERD--PSEATLVTVIS---ASADIAALPQGRELHGFSWR-HRFEL 174
S +A +F +L P T+ TV++ AS AA LH F+ +
Sbjct: 117 AS---DAVSLFRDMLREGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHS 173
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
NV V L+D Y K GL+ AR +F+++ + V++NAM+ G + G +ALDLF M+
Sbjct: 174 NVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMR 233
Query: 235 DE-VQPDHITFVGVLSACSRGGLFDEGR 261
+ + TF VL+ + G GR
Sbjct: 234 RKGLAATRFTFSTVLTVATGVGDLCLGR 261
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/527 (39%), Positives = 305/527 (57%), Gaps = 37/527 (7%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L A QLFD R++ WN ++ +G A+ +++ G+ N+T+
Sbjct: 208 LVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFAL 267
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDK--------- 133
LS+ + GR++H V+ E D FVG +L+DMY KC + +A +FD+
Sbjct: 268 AGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQ 327
Query: 134 --------------------------ILERDPS-EATLVTVISASADIAALPQGRELHGF 166
+ E P+ + L +V SA A+ + QGR++HGF
Sbjct: 328 FAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGF 387
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ + + +A+VDMY+K G ++ A +F + K V W M+ YA HG A
Sbjct: 388 VEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMA 447
Query: 227 LDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
L++F +MK E + P+ IT V VLSACS GL +G +F M +Y I P+ +HY CMVD
Sbjct: 448 LEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVD 507
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGN 345
L G +G LD+A + I + ++ + VW LL++C+LH H++ A+LA EKL++LE +DAG+
Sbjct: 508 LYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKLVQLEQYDAGS 567
Query: 346 YVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEI 405
YV++SN+YA W KLR M +R ++K SWI +KN H F++ D SHP EI
Sbjct: 568 YVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVALDTSHPRSAEI 627
Query: 406 YAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLI 465
YA L+ L R+KE GY T+ V HD+E +++ + HSE+LAIAFG+I+TP GT L I
Sbjct: 628 YAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEKLAIAFGIISTPVGTALRI 687
Query: 466 TKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
KNL++C+DCH AIKFI++ T+REI VRD+ R+HHFKDG CSC D+W
Sbjct: 688 FKNLRVCEDCHEAIKFITRATDREIVVRDLYRFHHFKDGQCSCEDFW 734
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 171/402 (42%), Gaps = 88/402 (21%)
Query: 10 ATKLVHLYSACDC----------LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIE 59
A K +H S C LHNAH++FD P R+L W +I A G + +
Sbjct: 51 AKKAIHRQSVRGCVPSSSVIARGLHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMR 110
Query: 60 LYYRLL-EIG-LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDM 117
+ +L E G P+ F L+ C+ L +E GRRIH ++R+ DV + A++DM
Sbjct: 111 AFAEMLDECGATAPNAFVLAGVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDM 170
Query: 118 YAKCSCVVNARQVFDKILERDPS-----------------------EATLVTVISASADI 154
YAKC AR+ F + ++D + E++L V S + +
Sbjct: 171 YAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIV 230
Query: 155 AALPQ-----------------GRELHGFSWRHRF-------------ELNVKVKTALV- 183
+ L + G +++ F +L+ +V A++
Sbjct: 231 SGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLE 290
Query: 184 -DMYAKCGLVKV---------ARNLFEQ---LREKRVVSWNAMITGYAMHGHSTKALDLF 230
D + C L+ + A ++F++ E R +W+ M+ GY +G +AL+ F
Sbjct: 291 EDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFF 350
Query: 231 EKM-KDEVQPDHITFVGVLSACSRGGLFDEGRM---FFESMVRDYHIDPSVQHYTCMVDL 286
+M ++ V V SAC+ G+ ++GR F E + + D + + +VD+
Sbjct: 351 RRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKL--GHRFDAPLA--SAIVDM 406
Query: 287 LGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
SG L++AC + + K + +W +L S HG ++A
Sbjct: 407 YSKSGSLEDACRIFRSAQTK-NVALWTTMLCSYASHGQGRMA 447
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 115/273 (42%), Gaps = 42/273 (15%)
Query: 13 LVHLYSACDCLHNAHQLFDR---IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
L+ +Y C + +A +FDR + F W+ ++ Y NG E A+E + R+L G+
Sbjct: 299 LMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGV 358
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
F AC+ +E+GR++H V + D + +A++DMY+K + +A +
Sbjct: 359 PAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACR 418
Query: 130 VFDKILERD---------------------------------PSEATLVTVISASADIAA 156
+F ++ P+E TLV V+SA +
Sbjct: 419 IFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGL 478
Query: 157 LPQGRELHGFSW---RHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-EKRVVSWNA 212
+ G H F+ + N + +VD+Y + GL+ A+N E+ + V W
Sbjct: 479 VSDG--YHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKT 536
Query: 213 MITGYAMHGHSTKALDLFEKMKDEVQPDHITFV 245
+++ +H H A EK+ Q D ++V
Sbjct: 537 LLSACRLHKHIEYAQLASEKLVQLEQYDAGSYV 569
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G F LA+ +V +YS L +A ++F +N+ LW ++ +YA +G +A+E+
Sbjct: 391 LGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEI 450
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ R+ ++P+ T L ACS + +G
Sbjct: 451 FSRMKAEKIMPNEITLVAVLSACSHSGLVSDG 482
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 77/190 (40%), Gaps = 16/190 (8%)
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE---VQPDHITFVGVLSAC 251
A +F+ + + +W ++I+G A G + F +M DE P+ GVL C
Sbjct: 77 AHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCC 136
Query: 252 SRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLL---GHSGRLDEACDLIMQMRVKPD 308
+ G + GR ++R + P V ++D+ G GR A + Q D
Sbjct: 137 AGLGDVESGRRIHGWILRS-GVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQ----KD 191
Query: 309 PGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNY-VILSNIYARAANWEGVAKLRK 367
W ++ +C G + A + E D ++ I+S + E + +L++
Sbjct: 192 ATSWNIVIRACLQDGDLVGATQLFD---ESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQ 248
Query: 368 LMIDRGIKKS 377
M+ G+ S
Sbjct: 249 -MVRAGVTFS 257
>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
Length = 485
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/481 (41%), Positives = 291/481 (60%), Gaps = 36/481 (7%)
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ + T+ L + ++EEGRR+H V E DV VG AL++MY KC V A
Sbjct: 5 GVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEA 64
Query: 128 RQVFDKI--------------------------LERD---------PSEATLVTVISASA 152
R F+KI L R+ P+ T +T++ A +
Sbjct: 65 RAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACS 124
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+ AL +GR++H F+ ++ V ALV+ Y +CG + A+ +F+ +R + V+SW++
Sbjct: 125 FLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSS 184
Query: 213 MITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
MI+ +A G +A++L+ +M E PD I F+ VL ACS G+ + FF S+V D
Sbjct: 185 MISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDT 244
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
++P+++HY CMVD+LG +G+L +A DL+ M P P ++ +L++CKL+ V+ E A
Sbjct: 245 QVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAA 304
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHA 391
E + EL+P ++ Y+ L+NIY+ A + A++RKLM +RGIKK CSWIEV ++ H
Sbjct: 305 AEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHE 364
Query: 392 FLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIA 451
F++GD HP DEIYA+++ L +MKEAGY T+ V DVE DEK N++ HSE+LAIA
Sbjct: 365 FIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIA 424
Query: 452 FGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
FGLI+TP G L I KNL++C DCH A K ISK+T REI VRD NR+HHF DG+CSC DY
Sbjct: 425 FGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFLDGMCSCNDY 484
Query: 512 W 512
W
Sbjct: 485 W 485
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 149/326 (45%), Gaps = 30/326 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G ++ T LV++Y C + A F++I + N+ W+ ++ AYA NG +A+ELY
Sbjct: 40 GLEVDVIVGTALVNMYGKCQSVEEARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELY 99
Query: 62 YRL--LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
+ G+ P+ TF L ACS L A+ EGR+IH V ++TD+ V AL++ Y
Sbjct: 100 REMGSARKGMAPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYG 159
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQ-GRELHGFSWRHRF--ELNV 176
+C + +A+ VFD + RD VIS S+ I+A Q GR HR E +
Sbjct: 160 RCGSLGDAKIVFDGMRRRD--------VISWSSMISAFAQRGRVDEAMELYHRMLSEGTL 211
Query: 177 KVKTALVDMYAKC---GLVKVARNLFEQL-----REKRVVSWNAMITGYAMHGHSTKALD 228
+ + C G+V+ + + F + E + + M+ G A D
Sbjct: 212 PDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAED 271
Query: 229 LFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP-SVQHYTCMVDLL 287
L M P + ++ +LSAC + G E + + +DP + Y + ++
Sbjct: 272 LLRLMP--FHPGPLLYMTMLSACKLYTDVERGEAAAEVV---FELDPENSSPYITLANIY 326
Query: 288 GHSGRLDEACDL--IMQMR-VKPDPG 310
+ R +A + +M+ R +K PG
Sbjct: 327 SAAKRPKDAARIRKLMEERGIKKKPG 352
>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/527 (37%), Positives = 316/527 (59%), Gaps = 35/527 (6%)
Query: 21 DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
+ ++ A +F I F +N +IR Y +E A+ Y +++ G PDNFT+P L
Sbjct: 80 NSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLL 139
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPS 140
KAC+ L +I EG++IH V + E DVFV +LI+MY +C + + VF+K+ + +
Sbjct: 140 KACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAA 199
Query: 141 ----------------------------------EATLVTVISASADIAALPQGRELHGF 166
E+ +V+ + A A+ AL G +HGF
Sbjct: 200 SWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGF 259
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
R+ ELN+ V+T+LVDMY KCG + A ++F+++ ++ ++++AMI+G A+HG A
Sbjct: 260 LLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESA 319
Query: 227 LDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
L +F KM K+ ++PDH+ +V VL+ACS GL EGR F M+++ ++P+ +HY C+VD
Sbjct: 320 LRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVD 379
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGN 345
LLG +G L+EA + I + ++ + +W L+ C++ +++L ++A ++L++L H+ G+
Sbjct: 380 LLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGD 439
Query: 346 YVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEI 405
Y+++SN+Y++ W+ VA+ R + +G+K++ S +E+K K H F+S D SHP C EI
Sbjct: 440 YLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEI 499
Query: 406 YAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLI 465
Y L +E ++K GY P + +V+ +EK + HS+++AIAFGL+ TP G+ + I
Sbjct: 500 YKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKI 559
Query: 466 TKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+NL++C DCH K IS I EREI VRD NR+H FK G CSC DYW
Sbjct: 560 ARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++ T LV +Y C CL A +F ++ +RN ++ +I A +G E A+ ++ ++++
Sbjct: 270 IVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKE 329
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR-NKWETDVFVGAALIDMYAKCSCVVN 126
GL PD+ + L ACS ++EGRR+ ++++ K E L+D+ + +
Sbjct: 330 GLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEE 389
Query: 127 ARQVFDKI 134
A + I
Sbjct: 390 ALETIQSI 397
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/553 (38%), Positives = 319/553 (57%), Gaps = 66/553 (11%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +F + L+N LIRA + + A+ LY+ +L+ GL PD+ T+PF +KAC+
Sbjct: 119 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 178
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK-------------CSC--------- 123
S G +H V+++ +E D ++ ++LI +YA CS
Sbjct: 179 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 238
Query: 124 ---------VVNARQVFDKILERD---------------------------------PSE 141
+ +AR VFD+++ RD P+E
Sbjct: 239 IDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTE 298
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
AT+V+++SA A + AL +G LH + +R E+N V TALVDMYAKCG + +A +F
Sbjct: 299 ATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNA 358
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEG 260
+ K V++WN +I G A+HG+ +A LF++MK+ V+P+ ITFV +LSACS G+ DEG
Sbjct: 359 MESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEG 418
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
+ + M Y I+P V+HY C++DLL +G L+EA +LI M ++P+P GALL C+
Sbjct: 419 QKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCR 478
Query: 321 LHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIAC 380
+HG+ +L E+ ++LI L+P +G Y++LSNIYA A W+ K+R LM GI K
Sbjct: 479 IHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGV 538
Query: 381 SWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEA-GYVPGTESVFHDVENDEKAN 439
S IE+K H F++GD SHP ++IY KL + R+K A GY T +V D+E ++K +
Sbjct: 539 SVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEH 598
Query: 440 MICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYH 499
+ HSE+LAIA+GL++ + I KNL++C DCH IK ISK+ REI VRD NR+H
Sbjct: 599 ALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFH 658
Query: 500 HFKDGICSCGDYW 512
HF+DG CSC D+W
Sbjct: 659 HFEDGECSCLDFW 671
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/546 (38%), Positives = 320/546 (58%), Gaps = 35/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + T LV +Y+ C +H+A ++FD++P+RNL WN +I + N Y+ A+ ++
Sbjct: 40 GFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVF 99
Query: 62 YRLL-EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+L E ++P+ + L AC+ + + GR++H V++ +V +L+DMY K
Sbjct: 100 KDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFK 159
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C ++F + +RD P EA+ TV
Sbjct: 160 CRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTV 219
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ +SA +AAL QG +H + + N+ + +L+ MYAKCG + A +FE + + V
Sbjct: 220 LHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNV 279
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
+SW AMI+ Y +HG + + ++LFE M E ++P H+TFV VLSACS G +EG F S
Sbjct: 280 ISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNS 339
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M + + ++P +HY CMVDLLG +G LDEA I M +KP P VWGALL +C+ +G++K
Sbjct: 340 MKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLK 399
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
+ A E+L E+EP++ GNYV+L+N+ R+ E ++R+LM G++K CSWI+VK
Sbjct: 400 MGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVK 459
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
N F + D SH + DEIY L+ LE +K+ GYV TE V + +E +E+ + HSE
Sbjct: 460 NMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSE 519
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LA+AFGL+ P + + I KNL+ C CH +K SKI +REI VRD+NR+H F DG C
Sbjct: 520 KLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFC 579
Query: 507 SCGDYW 512
SCGDYW
Sbjct: 580 SCGDYW 585
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 154/340 (45%), Gaps = 43/340 (12%)
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G P+ FTF L A +A + G+++H + ++ ++ ++FVG AL+DMYAKC+ + +A
Sbjct: 5 GPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSA 64
Query: 128 RQVFDKILERD----------------------------------PSEATLVTVISASAD 153
+VFD++ ER+ P+E ++ +V+SA A+
Sbjct: 65 VRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACAN 124
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+ L GR++HG + V +L+DMY KC LF+ + ++ VV+WN +
Sbjct: 125 MGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVL 184
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
+ G+ + +A + F M+ E + PD +F VL + + +G + +++ +
Sbjct: 185 VMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGY 244
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGHV-KLAE 329
V++ + L+ + D D V W A++++ +LHG ++ E
Sbjct: 245 ----VKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIE 300
Query: 330 LALEKLIE-LEPHDAGNYVILSNIYARAANWEGVAKLRKL 368
L L E +EP +LS EG+A +
Sbjct: 301 LFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSM 340
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 22/173 (12%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G+ + + L+ +Y+ C L +A+Q+F+ I N+ W +I AY +G IEL
Sbjct: 242 LGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIEL 301
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEG-------RRIHEDVIRNKWETDVFVG-- 111
+ +L G+ P + TF L ACS +EEG ++IH D+ G
Sbjct: 302 FEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIH----------DMNPGPE 351
Query: 112 --AALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRE 162
A ++D+ + + A++ F + + P+ + ++ A L GRE
Sbjct: 352 HYACMVDLLGRAGWLDEAKR-FIESMPMKPTPSVWGALLGACRKYGNLKMGRE 403
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/577 (36%), Positives = 314/577 (54%), Gaps = 65/577 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF P + T L+ +Y++C + +A LFD++ + WN++I Y NG Y+ A+ L
Sbjct: 150 LGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRL 209
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + + PD+ L AC + GR IHE V N + D + ALI+MYA
Sbjct: 210 FEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYAN 269
Query: 121 CSC-------------------------------VVNARQVFDKILERD----------- 138
C V +AR +FD+++ERD
Sbjct: 270 CGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGY 329
Query: 139 ----------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
P + T+++VISA + + AL Q +H + R F +
Sbjct: 330 AESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRAL 389
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD- 235
V AL+DMYAKCG + AR +FE + K V+SW++MI +AMHG++ A+ LF +MK+
Sbjct: 390 SVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEV 449
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
++P+ +TF+GVL AC GL +EG F SM+ ++ I P+ +HY CMVDL + L +
Sbjct: 450 NIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRK 509
Query: 296 ACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYAR 355
A +LI M P+ +WG+L+++C++HG +L E A ++L+ELEP G V+LSNIYA+
Sbjct: 510 AIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAK 569
Query: 356 AANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGR 415
W V +RK M +GI K A S IE+ N+ H F+ D H DEIY KL + +
Sbjct: 570 EKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSK 629
Query: 416 MKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDC 475
+K GY P T + D+E ++K ++ HSE+LA+ +GLI+ + + + I KNL+IC+DC
Sbjct: 630 LKLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISRRNESCIRIVKNLRICEDC 689
Query: 476 HIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
H +K +SK+ + EI VRD R+HH GICSC DYW
Sbjct: 690 HSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 166/383 (43%), Gaps = 74/383 (19%)
Query: 29 LFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI-GLVPDNFTFPFALKACSALS 87
+F +IP + N L+R + + E I LY+ L I D F+FP LKA S +S
Sbjct: 76 VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135
Query: 88 AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD--------- 138
A G IH + + D F+ LI MYA C +++AR +FDK+ D
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIID 195
Query: 139 ------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFEL 174
P L TV+SA L GR +H F + + +
Sbjct: 196 GYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAI 255
Query: 175 NVKVKTALVDMYAKC-------------------------------GLVKVARNLFEQLR 203
+ ++TAL++MYA C G+VK AR +F+Q+
Sbjct: 256 DSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMI 315
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRM 262
E+ +V W+AMI+GYA +AL LF++M + PD IT + V+SACS G +
Sbjct: 316 ERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQAN- 374
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCK 320
+ + V ++ ++D+ G L +A ++ M P V W +++N+
Sbjct: 375 WIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENM---PRKNVISWSSMINAFA 431
Query: 321 LHGHVKLAELALEKL--IELEPH 341
+HG+ A ++ + +EP+
Sbjct: 432 MHGNADSAIKLFRRMKEVNIEPN 454
>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
Length = 587
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/548 (39%), Positives = 307/548 (56%), Gaps = 38/548 (6%)
Query: 3 FGFHPV---LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIE 59
FG+ PV ++ + +Y L A LF +P RN+ WN ++ +G IE
Sbjct: 40 FGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIE 99
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
Y+ L E G +P+ + AC+ + G + H V++ +E DV V +++D Y
Sbjct: 100 AYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYG 159
Query: 120 KCSCVVNARQVFDKILER---------------------------------DPSEATLVT 146
KC C AR VFD + R +P++ + +
Sbjct: 160 KCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSS 219
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ A + L GR LH + R + N+ V +ALVDMY KCG V+ A +F + ++
Sbjct: 220 ALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRN 279
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
+V+WNAMI GYA G + AL +F+ M E P++IT V V+++CSRGGL +G F
Sbjct: 280 LVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELF 339
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
E+M + I+P +HY C+VDLLG +G ++A ++I M ++P VWGALL +CK+HG
Sbjct: 340 ETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGK 399
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
+L +A EKL EL+P D+GN+V+LSN++A A W +RK M + GIKK CSW+
Sbjct: 400 TELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVT 459
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
KN H F + D H +EI A L L +M+ AGY+P T+ +D+E +EK + + H
Sbjct: 460 WKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQH 519
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SE+LA+AFGLI P G + I KNL+IC DCH A KFIS I REI VRD NR+HHFK
Sbjct: 520 SEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQY 579
Query: 505 ICSCGDYW 512
CSCGDYW
Sbjct: 580 QCSCGDYW 587
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 141/321 (43%), Gaps = 21/321 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + +V Y C C A +FD + RN W ++ AYA NG E A Y
Sbjct: 143 GFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAY 202
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
G P +F AL C+ L + GR +H +R+ + ++FV +AL+DMY KC
Sbjct: 203 LGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKC 262
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
CV +A Q+F + +R+ T +I A I L F R
Sbjct: 263 GCVEDAEQIFYETPQRN--LVTWNAMIGGYAHIGDAQNA--LLVFDDMIRSGETAPNYIT 318
Query: 182 LVDMYAKC---GLVKVARNLFEQLREK-----RVVSWNAMITGYAMHGHSTKALDLFEKM 233
LV++ C GL K LFE +RE+ R + ++ G +A ++ + M
Sbjct: 319 LVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGM 378
Query: 234 KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS-VQHYTCMVDLLGHSGR 292
++P + +L AC G + GR+ E + + +DP ++ + ++ +GR
Sbjct: 379 P--MRPSISVWGALLGACKMHGKTELGRIAAEKL---FELDPQDSGNHVLLSNMFASAGR 433
Query: 293 LDEACDLIMQMR---VKPDPG 310
EA D+ +M+ +K DPG
Sbjct: 434 WAEATDIRKEMKNVGIKKDPG 454
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 136/325 (41%), Gaps = 39/325 (12%)
Query: 64 LLEIGLVPDNFTFPFALK-ACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAKC 121
+L +GL P++FTFP A K A SA G +IH IR + D FV A +DMY K
Sbjct: 1 MLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKT 60
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ AR +F ++ R+ P+ +
Sbjct: 61 GRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFF 120
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A A L G + HGF + FE++V V ++VD Y KC AR +F+ + + V
Sbjct: 121 NACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSV 180
Query: 209 SWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SW +M+ YA +G +A + + +P L+ C+ GR
Sbjct: 181 SWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVA 240
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
VR ID ++ + +VD+ G G +++A + I + + W A++ G +
Sbjct: 241 VRSC-IDANIFVASALVDMYGKCGCVEDA-EQIFYETPQRNLVTWNAMIGGYAHIGDAQN 298
Query: 328 AELALEKLIELEPHDAGNYVILSNI 352
A L + +I A NY+ L N+
Sbjct: 299 ALLVFDDMIR-SGETAPNYITLVNV 322
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/552 (35%), Positives = 320/552 (57%), Gaps = 43/552 (7%)
Query: 2 GFGFHPVLATKLVHLYSAC-------DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPY 54
G FH + + LVH+YS C L + H D + F +N ++ A +G
Sbjct: 151 GLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDN--DNDAFCYNSVLNALVESGRL 208
Query: 55 EVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAAL 114
A+E+ R+++ G+V D+ T+ + C + + G ++H +++ DVFVG+ L
Sbjct: 209 GEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSML 268
Query: 115 IDMYAKCSCVVNARQVFDKILERD---------------------------------PSE 141
+DM+ KC V++AR+VFD + R+ +E
Sbjct: 269 VDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNE 328
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
T +++A A +AAL G LH + + V V AL++MY+KCG + + ++F
Sbjct: 329 FTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFD 388
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEG 260
+R + +++WNAMI GY+ HG +AL LF+ M + P+H+TFVGVLSAC+ L +EG
Sbjct: 389 MRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEG 448
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
+ +++ + ++P ++HYTC+V +L +G L+EA + + +VK D W LLN+C
Sbjct: 449 FYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACN 508
Query: 321 LHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIAC 380
+H + L E +++++P D G Y +LSN+YA+A +W+ V +RK+M +R +KK
Sbjct: 509 IHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGV 568
Query: 381 SWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANM 440
SWIE++N H F S ++HP C +IY K++ L +K+ GYVP E+V HDVE+++K +
Sbjct: 569 SWIEIRNAVHVFSSDGSNHPECIQIYNKVQLLLEMIKQLGYVPNIEAVLHDVEDEQKESY 628
Query: 441 ICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHH 500
+ HSE+LAIA+GL+ P + + KNL+IC+DCH A+K ISK+T R I VRD +R+HH
Sbjct: 629 LNYHSEKLAIAYGLMKIPSPAPIRVIKNLRICEDCHTAVKLISKVTNRLIIVRDASRFHH 688
Query: 501 FKDGICSCGDYW 512
F+DG C+C D+W
Sbjct: 689 FRDGTCTCTDHW 700
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 172/408 (42%), Gaps = 47/408 (11%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
F+ + L++LY C L A LFD + R++ +NVL+ Y +G + ++L+ +
Sbjct: 53 FNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNM 112
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
+ P+ + F L AC+ + EG + H + + FV ++L+ MY+KC V
Sbjct: 113 VSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHV 172
Query: 125 VNARQVFD--------------------------------KILERDPSEA------TLVT 146
A QV + ++L R E T V+
Sbjct: 173 DLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVS 232
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V+ I L G ++H + +V V + LVDM+ KCG V AR +F+ L+ +
Sbjct: 233 VMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRN 292
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
VV W +++T Y +G + L+L M E + TF +L+A + G +
Sbjct: 293 VVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDL-LH 351
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
+ V I V ++++ G +D + D+ MR + D W A++ HG
Sbjct: 352 ARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNR-DIITWNAMICGYSQHGLG 410
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANW----EGVAKLRKLM 369
K A L + + L + N+V + + A+ EG L +LM
Sbjct: 411 KQALLLFQDM--LSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLM 456
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 39/175 (22%)
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
E N+ +L+++Y KC +++AR LF+++ + VVS+N ++ GY G + + LF+
Sbjct: 52 EFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKN 111
Query: 233 MKDEV-QPDHITFVGVLSACSRGG-----------LFDEGRMFF----ESMVRDY----H 272
M + QP+ F VLSAC+ G LF G +F S+V Y H
Sbjct: 112 MVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFH 171
Query: 273 IDPSVQH----------------YTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV 311
+D ++Q Y +++ L SGRL EA +++ +M D GV
Sbjct: 172 VDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRM---VDEGV 223
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 52/92 (56%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G ++ L+++YS C C+ +++ +F + R++ WN +I Y+ +G + A+ L
Sbjct: 357 LGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLL 416
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ +L G P++ TF L AC+ L+ + EG
Sbjct: 417 FQDMLSAGECPNHVTFVGVLSACAHLALVNEG 448
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/548 (38%), Positives = 321/548 (58%), Gaps = 38/548 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDR-IPQRNLFL-WNVLIRAYAWNGPYEVAI 58
+G F P + T L+ +Y + NA ++F+ R L + +N L+ Y N A+
Sbjct: 78 VGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAV 137
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
L+ ++ E G+ ++ T + AC + +E G +H ++ +++DV V I MY
Sbjct: 138 LLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMY 197
Query: 119 AKCSCVVNARQVFDKI--------------------------LERD-------PSEATLV 145
KC V A+++FD++ L R+ P TLV
Sbjct: 198 MKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLV 257
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
V+S+ A++ A G E+ F N + AL++MYA+CG + A+ +F+ + E+
Sbjct: 258 GVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPER 317
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
+VSW A+I GY MHGH A+ LF++M + ++PD FV VLSACS GL D+G +F
Sbjct: 318 TLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYF 377
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+ M R+Y ++P +HY+CMVDLLG +GRL EA LI M +KPD VWGALL +CK+H +
Sbjct: 378 KMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKN 437
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
V+LAELA E++IELEP + G YV+LSNIY+ A N +GV ++R +M ++ +KK CS++E
Sbjct: 438 VELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVE 497
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
+K + H F+ GD +H DEIY L+ LE + + P ++ + N + + H
Sbjct: 498 LKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKDN--REESNKDGFTRVGVH 555
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SE+LA+AFGL+NT G ++I KNL+IC+DCH+ K +SKI R++TVRD R+HHF++G
Sbjct: 556 SEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHFRNG 615
Query: 505 ICSCGDYW 512
CSC DYW
Sbjct: 616 SCSCKDYW 623
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 170/351 (48%), Gaps = 46/351 (13%)
Query: 41 WNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVI 100
WN +R A + A+ LY ++L G P+ FTFPFALK+C+ALS G + H +
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 101 RNKWETDVFVGAALIDMYAKCSCVVNARQVFDK--------------------------- 133
+ + FV LI MY K S V NAR+VF++
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136
Query: 134 -ILERDPSE-------ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
+L R +E TL+ +I A L G LH + ++ F+ +V V + M
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 196
Query: 186 YAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITF 244
Y KCG V A+ LF+++ K ++SWNAM++GYA +G +T L+L+ M + V PD +T
Sbjct: 197 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTL 256
Query: 245 VGVLSACSRGGLFDEG-RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
VGVLS+C+ G G + F+ + +P + + ++++ G L +A + M
Sbjct: 257 VGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNN--ALINMYARCGNLTKAQAVFDGM 314
Query: 304 RVKPDPGV--WGALLNSCKLHGHVKLAELALEKLIE--LEPHDAGNYVILS 350
P+ + W A++ +HGH ++A +++I +EP +LS
Sbjct: 315 ---PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLS 362
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/548 (39%), Positives = 307/548 (56%), Gaps = 38/548 (6%)
Query: 3 FGFHPV---LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIE 59
FG+ PV ++ + +Y L A LF +P RN+ WN ++ +G IE
Sbjct: 147 FGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIE 206
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
Y+ L E G +P+ + AC+ + G + H V++ +E DV V +++D Y
Sbjct: 207 AYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYG 266
Query: 120 KCSCVVNARQVFDKILER---------------------------------DPSEATLVT 146
KC C AR VFD + R +P++ + +
Sbjct: 267 KCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSS 326
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ A + L GR LH + R + N+ V +ALVDMY KCG V+ A +F + ++
Sbjct: 327 ALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRN 386
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
+V+WNAMI GYA G + AL +F+ M E P++IT V V+++CSRGGL +G F
Sbjct: 387 LVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELF 446
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
E+M + I+P +HY C+VDLLG +G ++A ++I M ++P VWGALL +CK+HG
Sbjct: 447 ETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGK 506
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
+L +A EKL EL+P D+GN+V+LSN++A A W +RK M + GIKK CSW+
Sbjct: 507 TELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVT 566
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
KN H F + D H +EI A L L +M+ AGY+P T+ +D+E +EK + + H
Sbjct: 567 WKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQH 626
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SE+LA+AFGLI P G + I KNL+IC DCH A KFIS I REI VRD NR+HHFK
Sbjct: 627 SEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQY 686
Query: 505 ICSCGDYW 512
CSCGDYW
Sbjct: 687 QCSCGDYW 694
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 141/321 (43%), Gaps = 21/321 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + +V Y C C A +FD + RN W ++ AYA NG E A Y
Sbjct: 250 GFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAY 309
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
G P +F AL C+ L + GR +H +R+ + ++FV +AL+DMY KC
Sbjct: 310 LGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKC 369
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
CV +A Q+F + +R+ T +I A I L F R
Sbjct: 370 GCVEDAEQIFYETPQRN--LVTWNAMIGGYAHIGDAQNA--LLVFDDMIRSGETAPNYIT 425
Query: 182 LVDMYAKC---GLVKVARNLFEQLREK-----RVVSWNAMITGYAMHGHSTKALDLFEKM 233
LV++ C GL K LFE +RE+ R + ++ G +A ++ + M
Sbjct: 426 LVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGM 485
Query: 234 KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS-VQHYTCMVDLLGHSGR 292
++P + +L AC G + GR+ E + + +DP ++ + ++ +GR
Sbjct: 486 P--MRPSISVWGALLGACKMHGKTELGRIAAEKL---FELDPQDSGNHVLLSNMFASAGR 540
Query: 293 LDEACDLIMQMR---VKPDPG 310
EA D+ +M+ +K DPG
Sbjct: 541 WAEATDIRKEMKNVGIKKDPG 561
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 159/382 (41%), Gaps = 39/382 (10%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P + LV+LYS D A P + + I A +G A+ + +L
Sbjct: 51 PFICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGAAQHGRPLPALSAFAGMLR 110
Query: 67 IGLVPDNFTFPFALK-ACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAKCSCV 124
+GL P++FTFP A K A SA G +IH IR + D FV A +DMY K +
Sbjct: 111 LGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRL 170
Query: 125 VNARQVFDKILERD----------------PSE-----------ATLVTVISASADIAA- 156
AR +F ++ R+ P E L V+SA A A
Sbjct: 171 KLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNAC 230
Query: 157 -----LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
L G + HGF + FE++V V ++VD Y KC AR +F+ + + VSW
Sbjct: 231 AGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWC 290
Query: 212 AMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
+M+ YA +G +A + + +P L+ C+ GR VR
Sbjct: 291 SMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRS 350
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
ID ++ + +VD+ G G +++A + + + + W A++ G + A L
Sbjct: 351 C-IDANIFVASALVDMYGKCGCVEDAEQIFYETPQR-NLVTWNAMIGGYAHIGDAQNALL 408
Query: 331 ALEKLIELEPHDAGNYVILSNI 352
+ +I A NY+ L N+
Sbjct: 409 VFDDMIR-SGETAPNYITLVNV 429
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/548 (38%), Positives = 321/548 (58%), Gaps = 38/548 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDR-IPQRNLFL-WNVLIRAYAWNGPYEVAI 58
+G F P + T L+ +Y + NA ++F+ R L + +N L+ Y N A+
Sbjct: 69 VGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAV 128
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
L+ ++ E G+ ++ T + AC + +E G +H ++ +++DV V I MY
Sbjct: 129 LLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMY 188
Query: 119 AKCSCVVNARQVFDKI--------------------------LERD-------PSEATLV 145
KC V A+++FD++ L R+ P TLV
Sbjct: 189 MKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLV 248
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
V+S+ A++ A G E+ F N + AL++MYA+CG + A+ +F+ + E+
Sbjct: 249 GVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPER 308
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
+VSW A+I GY MHGH A+ LF++M + ++PD FV VLSACS GL D+G +F
Sbjct: 309 TLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYF 368
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+ M R+Y ++P +HY+CMVDLLG +GRL EA LI M +KPD VWGALL +CK+H +
Sbjct: 369 KMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKN 428
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
V+LAELA E++IELEP + G YV+LSNIY+ A N +GV ++R +M ++ +KK CS++E
Sbjct: 429 VELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVE 488
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
+K + H F+ GD +H DEIY L+ LE + + P ++ + N + + H
Sbjct: 489 LKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKDN--REESNKDGFTRVGVH 546
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SE+LA+AFGL+NT G ++I KNL+IC+DCH+ K +SKI R++TVRD R+HHF++G
Sbjct: 547 SEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFHHFRNG 606
Query: 505 ICSCGDYW 512
CSC DYW
Sbjct: 607 SCSCKDYW 614
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 170/351 (48%), Gaps = 46/351 (13%)
Query: 41 WNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVI 100
WN +R A + A+ LY ++L G P+ FTFPFALK+C+ALS G + H +
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 101 RNKWETDVFVGAALIDMYAKCSCVVNARQVFDK--------------------------- 133
+ + FV LI MY K S V NAR+VF++
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127
Query: 134 -ILERDPSE-------ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
+L R +E TL+ +I A L G LH + ++ F+ +V V + M
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 187
Query: 186 YAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITF 244
Y KCG V A+ LF+++ K ++SWNAM++GYA +G +T L+L+ M + V PD +T
Sbjct: 188 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTL 247
Query: 245 VGVLSACSRGGLFDEG-RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
VGVLS+C+ G G + F+ + +P + + ++++ G L +A + M
Sbjct: 248 VGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNN--ALINMYARCGNLTKAQAVFDGM 305
Query: 304 RVKPDPGV--WGALLNSCKLHGHVKLAELALEKLIE--LEPHDAGNYVILS 350
P+ + W A++ +HGH ++A +++I +EP +LS
Sbjct: 306 ---PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLS 353
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/525 (39%), Positives = 312/525 (59%), Gaps = 27/525 (5%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRN----LFLWNVLIRAYAWNGPYEV 56
+G F + LV +Y L QLFD PQRN + LWNVLI G
Sbjct: 167 LGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSK 226
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW------ETDVFV 110
A L+ + E + + +++ G + D+ R + E +V
Sbjct: 227 AASLFEAMPE--------------RNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVS 272
Query: 111 GAALIDMYAKCSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSW 168
+I+ +++ A +F ++LE P++ T+V+ + A I AL G +H +
Sbjct: 273 WTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLS 332
Query: 169 RHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALD 228
+ F+LN + TALVDMYAKCG +K A +F + + K +++W+ MI G+A+HG +AL
Sbjct: 333 SNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQ 392
Query: 229 LFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLL 287
F KMK + PD + F+ +L+ACS G D+G FFESM DY I+P+++HYT +VDLL
Sbjct: 393 CFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLL 452
Query: 288 GHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYV 347
G +GRLDEA I M + PD +WGAL +C+ H ++++AEL EKL++LEP G+YV
Sbjct: 453 GRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYV 512
Query: 348 ILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYA 407
LSN+YA WE V ++R LM +RG++K S+IEV+ + H+F++GD +H +EI
Sbjct: 513 FLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISL 572
Query: 408 KLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITK 467
KL+ + K+ GY+P T V H++E +EK + + HSE+LA+AFGLI+T G+ + I K
Sbjct: 573 KLEEITASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVK 632
Query: 468 NLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
NL++C DCH +K+ SK++ REI +RD+ R+HHFKDG CSCGDYW
Sbjct: 633 NLRVCGDCHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 677
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 160/319 (50%), Gaps = 11/319 (3%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T+L+ + L A +F NLF++N LIR A N +E ++ + +L +
Sbjct: 74 VVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLS 133
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD T PF LK+ +AL + GR +H V++ E D FV +L+DMY K +
Sbjct: 134 IRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGL 193
Query: 129 QVFDKILERDPSEATLV--TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
Q+FD+ +R+ +E+ L+ +I+ + L + L + E N +L++ +
Sbjct: 194 QLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASL----FEAMPERNAGSWNSLINGF 249
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFV 245
+ G + AR LF Q+ EK VVSW MI G++ +G KAL +F +M +E V+P+ +T V
Sbjct: 250 VRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVV 309
Query: 246 GVLSACSRGGLFDEGRMFFESMVRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
L AC++ G G + + + ++ + T +VD+ G + A + ++ +
Sbjct: 310 SALLACTKIGALQVGERIHNYLSSNGFQLNRGIG--TALVDMYAKCGNIKSASRVFVETK 367
Query: 305 VKPDPGVWGALLNSCKLHG 323
K D W ++ +HG
Sbjct: 368 GK-DLLTWSVMIWGWAIHG 385
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 124/312 (39%), Gaps = 56/312 (17%)
Query: 137 RDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
R P E + +I AS LPQ ++H + H N +V T L+ + A
Sbjct: 37 RSP-ETHFIPLIHASN---TLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYAL 92
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSA----- 250
++F + +NA+I G A + ++ F M + ++PD +T VL +
Sbjct: 93 SIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALV 152
Query: 251 ------CSRGGLFDEGRMFFESMVRDYHID------------------------PSVQHY 280
C GG+ G + F+S VR +D S+ +
Sbjct: 153 DVGLGRCLHGGVMKLG-LEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLW 211
Query: 281 TCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEP 340
+++ G L +A L M + + G W +L+N +G + + A E +++
Sbjct: 212 NVLINGCCKVGDLSKAASLFEAMPER-NAGSWNSLINGFVRNGDL---DRARELFVQMPE 267
Query: 341 HDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKS--------IACSWI---EVKNKA 389
+ ++ + N +++ + E + M++ G++ + +AC+ I +V +
Sbjct: 268 KNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERI 327
Query: 390 HAFLSGDASHPN 401
H +LS + N
Sbjct: 328 HNYLSSNGFQLN 339
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/527 (41%), Positives = 308/527 (58%), Gaps = 37/527 (7%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-EIGL--VPDNFTFPFA 79
L +A LFDR+P+R+ F W+ ++ A+A +G A+ +Y R+L E G V + FT A
Sbjct: 109 LASARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSA 168
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
L A +A GR +H V+R + D V +AL DMYAKC V +AR VFD++ RD
Sbjct: 169 LAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDV 228
Query: 139 --------------------------------PSEATLVTVISASADIAALPQGRELHGF 166
P+E T V+ A A+ + G+++HG
Sbjct: 229 VSWTAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGR 288
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ R + ++ALV MY+K G + A +F + + +VSW AMI+GYA +G +A
Sbjct: 289 MTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEA 348
Query: 227 LDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
L F+ + + +PDH+TFVGVLSAC+ GL D+G F S+ +Y I+ + HY C++D
Sbjct: 349 LRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVID 408
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGN 345
LL SG + A ++I M VKP+ +W +LL C++H +V+LA A E L E+EP +
Sbjct: 409 LLSRSGLFERAEEMINTMSVKPNKFLWASLLGGCRIHKNVRLARWAAEALFEIEPENPAT 468
Query: 346 YVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEI 405
YV L+NIYA ++ V R++M +GI K A SWIEV + H FL GD HP +++
Sbjct: 469 YVTLANIYASVGLFDEVENTRRIMELKGITKMPASSWIEVGTRMHVFLVGDKLHPQAEQV 528
Query: 406 YAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLI 465
YA LK L +M+E GYV T V HDVE+++K I HSERLA+AFG+I TP G + +
Sbjct: 529 YALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGAPIKV 588
Query: 466 TKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
KNL+IC DCH IK ISKI +REI VRD NR+HHFK+G CSC DYW
Sbjct: 589 FKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
+ LVH+YS + A ++F +P+ +L W +I YA NG + A+ + LL G
Sbjct: 302 SALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCR 361
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDV 99
PD+ TF L AC+ +++G I +
Sbjct: 362 PDHVTFVGVLSACAHAGLVDKGLSIFHSI 390
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/570 (38%), Positives = 313/570 (54%), Gaps = 65/570 (11%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V + ++ L + A +LF+ + ++++ W+ LI Y NG YE A+ ++ +
Sbjct: 239 VASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNAN 298
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA-------- 119
G+ D L AC+ LS ++ G+ IH VIR E+ V + ALI MY+
Sbjct: 299 GMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDA 358
Query: 120 -----------------------KCSCVVNARQVFDKILERD------------------ 138
KC V AR +FD + E+D
Sbjct: 359 QKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFS 418
Query: 139 ---------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALV 183
P E LV+VISA +AAL QG+ +H + ++ ++NV + T L+
Sbjct: 419 ETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLL 478
Query: 184 DMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHI 242
DMY KCG V+ A +F + EK V SWNA+I G A++G ++LD+F +MK+ V P+ I
Sbjct: 479 DMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEI 538
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
TF+GVL AC GL DEGR F SM+ + I+P+V+HY CMVDLLG +G L+EA LI
Sbjct: 539 TFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIES 598
Query: 303 MRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGV 362
M + PD WGALL +CK HG ++ E KLIEL+P G +V+LSNI+A +WE V
Sbjct: 599 MPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDV 658
Query: 363 AKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYV 422
++R +M +G+ K+ CS IE H FL+GD +HP +++ L + R+K GY
Sbjct: 659 LEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYA 718
Query: 423 PGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFI 482
P T V D++ +EK + HSE+LAIAFGL+ T + I KNL+IC+DCH A K I
Sbjct: 719 PDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLI 778
Query: 483 SKITEREITVRDVNRYHHFKDGICSCGDYW 512
SK REI VRD +R+H+FK+G CSC DYW
Sbjct: 779 SKAYAREIVVRDRHRFHYFKEGACSCMDYW 808
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 164/313 (52%), Gaps = 13/313 (4%)
Query: 28 QLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALS 87
Q+FDRI N F+WN ++RAY + E A+ LY +++ + PDN+T+P ++AC+
Sbjct: 96 QIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRL 155
Query: 88 AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTV 147
G+ IH+ V++ +++DV+V LI+MYA C + +AR++FD E+ ++
Sbjct: 156 LEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFD--------ESPVLDS 207
Query: 148 ISASADIAALPQGRELH--GFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+S ++ +A + ++ + + N+ +++ + K G V A LF ++ EK
Sbjct: 208 VSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEK 267
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
+VSW+A+I+GY +G +AL +F +M + ++ D + V VLSAC+ + G+M
Sbjct: 268 DMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIH 327
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
++R I+ V ++ + SG + +A L D W ++++ C G
Sbjct: 328 GLVIR-MGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSH-NLDQISWNSMISGCMKCGS 385
Query: 325 VKLAELALEKLIE 337
V+ A + + E
Sbjct: 386 VEKARALFDVMPE 398
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 76/150 (50%), Gaps = 2/150 (1%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + +L T L+ +Y C C+ NA ++F+ + ++ + WN LI A NG E +++++
Sbjct: 466 GLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMF 525
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVI-RNKWETDVFVGAALIDMYAK 120
+ G++P+ TF L AC + ++EGR +I ++ E +V ++D+ +
Sbjct: 526 SEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGR 585
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISA 150
+ A ++ + + P AT ++ A
Sbjct: 586 AGLLNEAEKLIES-MPMAPDVATWGALLGA 614
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/563 (37%), Positives = 319/563 (56%), Gaps = 70/563 (12%)
Query: 18 SACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFP 77
S + LH A ++ +I NLF++N LIR + + E + Y + L GL+PDN T P
Sbjct: 62 STTNLLHYAIRVASQIQNPNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHP 121
Query: 78 FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA------------------ 119
F +KAC+ L G + H I++ +E D +V +L+ MYA
Sbjct: 122 FLVKACAQLENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRF 181
Query: 120 -------------KCSCVVNARQVFDKILERD---------------------------- 138
+C +AR++FD++ ER+
Sbjct: 182 DVVSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQ 241
Query: 139 -----PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVK 193
+E +V VIS+ A + AL G + H + R++ LN+ + TA+VDMYA+CG V+
Sbjct: 242 AEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVE 301
Query: 194 VARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACS 252
A +FEQL EK V+ W A+I G AMHG++ KAL F +M K P ITF VL+ACS
Sbjct: 302 KAVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACS 361
Query: 253 RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
G+ + G FESM RD+ ++P ++HY CMVDLLG +G+L +A +++M VKP+ +W
Sbjct: 362 HAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIW 421
Query: 313 GALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDR 372
ALL +C++H +V++ E + L+E++P +G+YV+LSNIYARA W+ V +R++M D+
Sbjct: 422 RALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDK 481
Query: 373 GIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKW---LEGRMKEAGYVPGTESVF 429
G++K S IE+ K H F GD +HP ++I + W + ++K AGYV T
Sbjct: 482 GVRKPPGYSLIEIDGKVHEFTIGDKTHPEIEKI--ERIWEDIILPKIKLAGYVGNTAETM 539
Query: 430 HDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITERE 489
D++ +EK + HSE+LAIA+G++ T + I KNL++C+DCH A K ISK+ E E
Sbjct: 540 FDIDEEEKEGALHRHSEKLAIAYGIMKIRAPTPIRIVKNLRVCEDCHTATKLISKVFEVE 599
Query: 490 ITVRDVNRYHHFKDGICSCGDYW 512
+ VRD NR+HHFK+G CSC DYW
Sbjct: 600 LIVRDRNRFHHFKEGTCSCMDYW 622
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/546 (38%), Positives = 319/546 (58%), Gaps = 42/546 (7%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQ--RNLFLWNVLIRAYAWNGPYEVAIELYYRL-L 65
+A+ LV +Y+ + + A Q+FD +P + L +WN +I YA G E A+ L+ R+
Sbjct: 311 VASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEA 370
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
E G VP T L AC+ A +H V++ + FV AL+DMYA+
Sbjct: 371 EAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTD 430
Query: 126 NARQVFDKI--------------------------LERD----------PSEATLVTVIS 149
AR++F + L R+ P+ TL+T++
Sbjct: 431 VARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLP 490
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A +AA +G+E+HG++ RH + +V V +ALVDMYAKCG + ++R +F++L + ++
Sbjct: 491 GCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTIT 550
Query: 210 WNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
WN +I Y MHG +A LF++M E +P+ +TF+ L+ACS G+ D G F +M
Sbjct: 551 WNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAM 610
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV-KPDPGVWGALLNSCKLHGHVK 326
RD+ ++P+ C+VD+LG +GRLDEA ++ M + W +L +C+LH +V
Sbjct: 611 ERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVH 670
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
L E+A E+L+ELEP +A +YV+L NIY+ A W A++R M RG+ K CSWIEV
Sbjct: 671 LGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVD 730
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
H F++G+++HP +E++A ++ L G M GY P T V HD+++ +KA ++ CHSE
Sbjct: 731 GAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSE 790
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LAIAFGL+ G + + KNL++C+DCH A KF+SK+ REI +RDV R+HHF++G C
Sbjct: 791 KLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQC 850
Query: 507 SCGDYW 512
SCGDYW
Sbjct: 851 SCGDYW 856
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 157/381 (41%), Gaps = 50/381 (13%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQR--NLFLWNVLIRAYAWNGPYEVAIELYYRL 64
P +A L+ Y+ C L A ++F I + +N LI A ++ A+ +
Sbjct: 96 PAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAM 155
Query: 65 LEIGLVPDNFTFPFALKACS----ALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMY 118
L G +FT L+A S A +A+ GR H ++N F AL+ MY
Sbjct: 156 LAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMY 215
Query: 119 AKCSCVVNARQVF--------------------------DKILER---------DPSEAT 143
A+ V +A+++F D+ ++ P T
Sbjct: 216 ARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVT 275
Query: 144 LVTVISASADIAALPQGRELHGFSWRH-RFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
+ + A + + L GRE+H + + N V +ALVDMYA V AR +F+ +
Sbjct: 276 FASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV 335
Query: 203 RE--KRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ--PDHITFVGVLSACSRGGLFD 258
+ K++ WNAMI GYA G +AL LF +M+ E P T VL AC+R F
Sbjct: 336 PDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAF- 394
Query: 259 EGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
G+ V + + ++D+ G+ D A I M PD W L+
Sbjct: 395 AGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVA-RRIFAMVDLPDVVSWNTLITG 453
Query: 319 CKLHGHVKLAELALEKLIELE 339
C + GHV A ++ +LE
Sbjct: 454 CVVQGHVADAFQLAREMQQLE 474
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 122/303 (40%), Gaps = 69/303 (22%)
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYAKCSCVVNARQ 129
D+ P A+K+ +AL R IH +R V AL+ YA+C + A +
Sbjct: 58 DHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALE 117
Query: 130 VFDKILERDPSEATLVTVISA--------------------------------------- 150
VF I + + ++ISA
Sbjct: 118 VFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHL 177
Query: 151 SADIAALPQGRELHGFSWR-------HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
A AA+ GRE H F+ + RF N AL+ MYA+ GLV A+ LF
Sbjct: 178 PAAAAAVRLGREAHAFALKNGLLHGHQRFAFN-----ALLSMYARLGLVADAQRLFAGAT 232
Query: 204 EKR--VVSWNAMITGYAMHGHSTKALD-LFEKMKDEVQPDHITFVGVLSACSRGGLFDEG 260
R VV+WN M++ G +A+ L++ + V+PD +TF L ACSR L D G
Sbjct: 233 PGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVG 292
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLG---HSGRLDEACDLIMQMRVKPDP----GVWG 313
R +++D + + + +VD+ G+ + D++ PD G+W
Sbjct: 293 REMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV------PDSGKQLGMWN 346
Query: 314 ALL 316
A++
Sbjct: 347 AMI 349
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/542 (36%), Positives = 316/542 (58%), Gaps = 35/542 (6%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
+ ++A V Y+ C L AH++F I + + WN LI Y+ + ++++ Y+++
Sbjct: 427 NELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMK 486
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
GL+PD FT L ACS + +++ G+ +H +IRN+ E D FV +L+ +Y C +
Sbjct: 487 SSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELS 546
Query: 126 NARQVFDKILER---------------------------------DPSEATLVTVISASA 152
A +FD + ++ P E ++++V A +
Sbjct: 547 TAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACS 606
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+ +L GRE HG++ + E N + +++DMYAK G V + +F L+E+ V SWNA
Sbjct: 607 LLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNA 666
Query: 213 MITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
M+ GY +HG + +A+ LFE+M+ PD +TF+GVL+AC+ GL EG + + M +
Sbjct: 667 MVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLF 726
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ-MRVKPDPGVWGALLNSCKLHGHVKLAEL 330
++P+++HY C++D+L +G+LDEA + + M +P G+W LL+SC++H ++++ E
Sbjct: 727 GMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEK 786
Query: 331 ALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAH 390
KL EP NYV+LSN+YA + W+ V K+R+ M + ++K CSWIE+ K
Sbjct: 787 IAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVF 846
Query: 391 AFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAI 450
+F++G++S +EI + LE + + GY P T SV HD+ +EK + HSE+LAI
Sbjct: 847 SFVAGESSLDGFEEIKSLWSVLEREIGKMGYRPDTSSVQHDLSEEEKTEQLRGHSEKLAI 906
Query: 451 AFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGD 510
+GLI T +GT L + KNL+IC DCH A K ISK+ EREI VRD R+HHFK+G CSCGD
Sbjct: 907 TYGLIRTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGFCSCGD 966
Query: 511 YW 512
YW
Sbjct: 967 YW 968
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 143/285 (50%), Gaps = 41/285 (14%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-E 66
VL T+++ +YS C ++ +FD + ++NLF WN +I +Y+ N Y +E++ +++ E
Sbjct: 118 VLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITE 177
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
GL+PDNFTFP +KAC+ +S ++ G +H V++ + DVFV AL+ Y V +
Sbjct: 178 SGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSD 237
Query: 127 ARQVFDKILERD-------------------------------------PSEATLVTVIS 149
A +VF + ER+ P ATL TV+
Sbjct: 238 ALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLP 297
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A + G+ +HG + + + V V AL+DMY+KCG + A+ +F+ K VVS
Sbjct: 298 VCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVS 357
Query: 210 WNAMITGYAMHGHSTKALDLFEKM---KDEVQPDHITFVGVLSAC 251
WN M+ G++ G K DL +M +++ D +T + + C
Sbjct: 358 WNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVC 402
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 156/350 (44%), Gaps = 43/350 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE-- 66
++ LV Y + +A ++F +P+RNL WN +IR ++ NG E L +++E
Sbjct: 221 VSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKD 280
Query: 67 --IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
I PD T L C+ I G+ +H ++ + +V V AL+DMY+KC C+
Sbjct: 281 DEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCI 340
Query: 125 VNARQVFDKILERDP-SEATLVTVISASADI----------------------------- 154
+A+ +F ++ S T+V SA+ DI
Sbjct: 341 NDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVP 400
Query: 155 -----AALPQGRELHGFSWRHRFELNVK-VKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+ LP +ELH +S + F N + V A V YAKCG + A +F +R K V
Sbjct: 401 VCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVN 460
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNA+I GY+ +LD + +MK + PD T +LSACS+ G+ +
Sbjct: 461 SWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLI 520
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
+R+ ++ Y ++ L H G L A L M K W ++N
Sbjct: 521 IRN-RLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVS-WNTMVN 568
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 158/388 (40%), Gaps = 70/388 (18%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+ L+ +YS C C+++A +F +N+ WN ++ ++ G +L ++L
Sbjct: 325 VVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAG 384
Query: 68 G--LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAKCSCV 124
G L D T A+ C S + + +H ++ ++ + V A + YAKC +
Sbjct: 385 GGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSL 444
Query: 125 VNARQVFDKILERD---------------------------------PSEATLVTVISAS 151
A +VF I + P T+ +++SA
Sbjct: 445 SYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSAC 504
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+ I +L G+E+HG R+R E + V +L+ +Y CG + A LF+ + +K +VSWN
Sbjct: 505 SQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWN 564
Query: 212 AMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGR--------- 261
M+ GY +G +AL LF +M VQP I+ + V ACS GR
Sbjct: 565 TMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKC 624
Query: 262 -----MFFESMVRDYHI----------------DPSVQHYTCMVDLLGHSGRLDEACDLI 300
F V D + + SV + MV G GR EA L
Sbjct: 625 LLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLF 684
Query: 301 MQMRVK---PDPGVWGALLNSCKLHGHV 325
+M+ PD + +L +C G V
Sbjct: 685 EEMQRTGHCPDELTFLGVLTACNHSGLV 712
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 19/188 (10%)
Query: 160 GRELHGF-SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
GR++H S R + + T ++ MY+ CG +R++F+ LR+K + WNA+I+ Y+
Sbjct: 100 GRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYS 159
Query: 219 MHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACS-----RGGLFDEGRMFFESMVRDY 271
+ L++F KM E + PD+ TF V+ AC+ + GL G + +V D
Sbjct: 160 RNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDV 219
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGHVKLAE 329
+ +V G +G + +A + ++ P+ + W +++ +G +
Sbjct: 220 FVS------NALVSFYGTNGSVSDALRVF---KIMPERNLVSWNSMIRVFSDNGLSEECF 270
Query: 330 LALEKLIE 337
L L +++E
Sbjct: 271 LLLGQMME 278
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/548 (38%), Positives = 314/548 (57%), Gaps = 39/548 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
F ++ + L+ YS D + +LF +P+ + +NV+I +YAWNG ++ + +L+
Sbjct: 271 NFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLF 330
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIE--EGRRIHEDVIRNKWETDVFVGAALIDMYA 119
+L D FPFA A S++ GR+IH I + V AL+DMYA
Sbjct: 331 RKLQFTRF--DRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYA 388
Query: 120 KCSCVVNARQVFDKILERDP---------------------------------SEATLVT 146
KC+ A+++FD I + +AT +
Sbjct: 389 KCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFAS 448
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ A A++A++ GR+LH R F NV +AL+D YAKCG + A F ++ E+
Sbjct: 449 ILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERN 508
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
VSWNA+I+ YA +G+ L+ F++M + +PD ++F+ VLSACS G +E F
Sbjct: 509 SVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFN 568
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
SM + Y + P +HYT MVD+L +GR DEA L+ +M +P +W ++LNSC++H +
Sbjct: 569 SMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNH 628
Query: 326 KLAELALEKLIELEP-HDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
+LA+ A ++L +E DA Y+ +SNIYA A W+ VAK++K M DRG++K A SW+E
Sbjct: 629 ELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVE 688
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
+K++ H F + D SHP +I K+ L M++ GY P T HDV+ K + H
Sbjct: 689 IKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYH 748
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SER AIAF L+NTPDG+ +++ KNL+ C DCH AIK IS+I EREI VRD +R+HHFKDG
Sbjct: 749 SERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDG 808
Query: 505 ICSCGDYW 512
+CSCGDYW
Sbjct: 809 VCSCGDYW 816
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 168/371 (45%), Gaps = 36/371 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G+ ++ ++ LV Y CL+ A QLF + ++ +N L+ Y+ G E AIEL
Sbjct: 169 LGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIEL 228
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ L G+ P +FTF L A L + G+++H V++ + +VFVG AL+D Y+K
Sbjct: 229 FLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSK 288
Query: 121 CSCVVNARQVFDKILERDPSEATLV---------------------------------TV 147
V ++F ++ E D +V T+
Sbjct: 289 HDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATL 348
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+S + L GR++H + +V+ ALVDMYAKC K A+ +F+ + K
Sbjct: 349 LSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKST 408
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFES 266
V W AMI+ Y G + +++F M+ P D TF +L AC+ GR
Sbjct: 409 VPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSL 468
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
++R + +V + ++D G + +A +M + + W AL+++ +G+V
Sbjct: 469 LIRSGFMS-NVYSGSALLDTYAKCGCMTDAIKSFGEMPER-NSVSWNALISAYAQNGNVD 526
Query: 327 LAELALEKLIE 337
+ +++I+
Sbjct: 527 GTLNSFQQMIQ 537
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/476 (23%), Positives = 189/476 (39%), Gaps = 90/476 (18%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L A +LFD + +R W +LI Y + + A LY + G+ PD T L
Sbjct: 90 LSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSG 149
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---- 138
L +IH VI+ +E ++ V +L+D Y K C+ A Q+F +L +D
Sbjct: 150 FGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTF 209
Query: 139 -----------------------------PSEATLVTVISASADIAALPQGRELHGFSWR 169
PS+ T ++SA+ + G+++HGF +
Sbjct: 210 NSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLK 269
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
F NV V AL+D Y+K V LF ++ E +S+N +IT YA +G ++ DL
Sbjct: 270 TNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDL 329
Query: 230 FEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMF----------FESMVRDYHID---- 274
F K++ F +LS + GR FES V + +D
Sbjct: 330 FRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAK 389
Query: 275 ----------------PSVQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWGAL 315
S +T M+ G+ +E ++ MR V D + ++
Sbjct: 390 CNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASI 449
Query: 316 LNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAK---LRKLMIDR 372
L +C LA ++L + + +G +SN+Y+ +A + AK + +
Sbjct: 450 LRAC-----ANLASISLGRQLHSLLIRSG---FMSNVYSGSALLDTYAKCGCMTDAIKSF 501
Query: 373 G-IKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTES 427
G + + + SW +A +S A + N D + +M ++GY P + S
Sbjct: 502 GEMPERNSVSW-------NALISAYAQNGNVDGTLNSFQ----QMIQSGYKPDSVS 546
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPD 240
++ + K G + AR LF+ + E+ VSW +I GY S +A L+ M + ++PD
Sbjct: 80 MISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPD 139
Query: 241 HITFVGVLSA 250
++T V +LS
Sbjct: 140 YVTLVTLLSG 149
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/545 (38%), Positives = 312/545 (57%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + + LV +Y+ + A +FD++ R + W +I Y NG A+ ++
Sbjct: 115 GFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVF 174
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + + PD + A + + + +G+ IH V + E + + +L MYAK
Sbjct: 175 KEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKR 234
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
V AR F+++ + + T+ + +
Sbjct: 235 GLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAV 294
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
ASA + +L R L G+ + + + V T L+DMYAKCG + +AR +F+++ +K VV
Sbjct: 295 LASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVV 354
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
W+ MI GY +HGH +A+ L+ +MK V P+ TF+G+L+AC GL EG F M
Sbjct: 355 LWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM 414
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
D+ I+P QHY+C+VDLLG +G L++A D IM M +KP VWGALL++CK+H V+L
Sbjct: 415 -PDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRL 473
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E+A E+L L+P++ G+YV LSN+YA A W VA +R +M +G+ K + S IE+
Sbjct: 474 GEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEING 533
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
F GD SHP EI+ +L LE R+K AGYVP ESV HD+ ++E +C HSER
Sbjct: 534 NLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSER 593
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+A+G+I+T GT L ITKNL+ C +CH AIK ISK+ +REI +RD R+HHFKDG+CS
Sbjct: 594 LAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCS 653
Query: 508 CGDYW 512
CGD+W
Sbjct: 654 CGDFW 658
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 170/377 (45%), Gaps = 72/377 (19%)
Query: 22 CLH-----NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTF 76
CLH AH+ F + + ++ LWN +I+ Y + I +Y + + P+ FTF
Sbjct: 29 CLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTF 88
Query: 77 PFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILE 136
+ LKAC S G++IH + + ++VFV +L+ MYAK + AR VFDK+ +
Sbjct: 89 LYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHD 148
Query: 137 R----------------DPSEA-----------------TLVTVISASADIAALPQGREL 163
R DP EA LV+V++A ++ L QG+ +
Sbjct: 149 RTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSI 208
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
HG + E + +L MYAK GLV+VAR F ++ + ++ WNAMI+GYA +G+
Sbjct: 209 HGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYG 268
Query: 224 TKALDLFEKM-KDEVQPDHITF-VGVLSACSRG-------------------------GL 256
+A+ LF +M ++ D IT VL++ G GL
Sbjct: 269 EEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGL 328
Query: 257 FDE----GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDP 309
D G ++ V D D V ++ M+ G G EA L +M+ V P+
Sbjct: 329 IDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPND 388
Query: 310 GVWGALLNSCKLHGHVK 326
G + LL +CK G VK
Sbjct: 389 GTFIGLLTACKNSGLVK 405
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 116/254 (45%), Gaps = 34/254 (13%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G F P + L +Y+ + A F+R+ + NL LWN +I YA NG E AI+L
Sbjct: 215 LGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKL 274
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ + D+ T A+ A + + ++E R + + ++++ D FV LIDMYAK
Sbjct: 275 FREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAK 334
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + AR VFD++ ++D P++ T + +
Sbjct: 335 CGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGL 394
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
++A + + +G EL H E + + + +VD+ + G + A + + K
Sbjct: 395 LTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPG 454
Query: 208 VS-WNAMITGYAMH 220
VS W A+++ +H
Sbjct: 455 VSVWGALLSACKIH 468
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/546 (38%), Positives = 319/546 (58%), Gaps = 42/546 (7%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQ--RNLFLWNVLIRAYAWNGPYEVAIELYYRL-L 65
+A+ LV +Y+ + + A Q+FD +P + L +WN +I YA G E A+ L+ R+
Sbjct: 309 VASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEA 368
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
E G VP T L AC+ A +H V++ + FV AL+DMYA+
Sbjct: 369 EAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTD 428
Query: 126 NARQVFDKI--------------------------LERD----------PSEATLVTVIS 149
AR++F + L R+ P+ TL+T++
Sbjct: 429 VARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLP 488
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A +AA +G+E+HG++ RH + +V V +ALVDMYAKCG + ++R +F++L + ++
Sbjct: 489 GCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTIT 548
Query: 210 WNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
WN +I Y MHG +A LF++M E +P+ +TF+ L+ACS G+ D G F +M
Sbjct: 549 WNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAM 608
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV-KPDPGVWGALLNSCKLHGHVK 326
RD+ ++P+ C+VD+LG +GRLDEA ++ M + W +L +C+LH +V
Sbjct: 609 ERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVH 668
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
L E+A E+L+ELEP +A +YV+L NIY+ A W A++R M RG+ K CSWIEV
Sbjct: 669 LGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVD 728
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
H F++G+++HP +E++A ++ L G M GY P T V HD+++ +KA ++ CHSE
Sbjct: 729 GAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSE 788
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LAIAFGL+ G + + KNL++C+DCH A KF+SK+ REI +RDV R+HHF++G C
Sbjct: 789 KLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQC 848
Query: 507 SCGDYW 512
SCGDYW
Sbjct: 849 SCGDYW 854
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 157/381 (41%), Gaps = 50/381 (13%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQR--NLFLWNVLIRAYAWNGPYEVAIELYYRL 64
P +A L+ Y+ C L A ++F I + +N LI A ++ A+ +
Sbjct: 94 PAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAM 153
Query: 65 LEIGLVPDNFTFPFALKACS----ALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMY 118
L G +FT L+A S A +A+ GR H ++N F AL+ MY
Sbjct: 154 LAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMY 213
Query: 119 AKCSCVVNARQVF--------------------------DKILER---------DPSEAT 143
A+ V +A+++F D+ ++ P T
Sbjct: 214 ARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVT 273
Query: 144 LVTVISASADIAALPQGRELHGFSWRH-RFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
+ + A + + L GRE+H + + N V +ALVDMYA V AR +F+ +
Sbjct: 274 FASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV 333
Query: 203 RE--KRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ--PDHITFVGVLSACSRGGLFD 258
+ K++ WNAMI GYA G +AL LF +M+ E P T VL AC+R F
Sbjct: 334 PDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAF- 392
Query: 259 EGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
G+ V + + ++D+ G+ D A I M PD W L+
Sbjct: 393 AGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVA-RRIFAMVDLPDVVSWNTLITG 451
Query: 319 CKLHGHVKLAELALEKLIELE 339
C + GHV A ++ +LE
Sbjct: 452 CVVQGHVADAFQLAREMQQLE 472
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 122/303 (40%), Gaps = 69/303 (22%)
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYAKCSCVVNARQ 129
D+ P A+K+ +AL R IH +R V AL+ YA+C + A +
Sbjct: 56 DHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALE 115
Query: 130 VFDKILERDPSEATLVTVISA--------------------------------------- 150
VF I + + ++ISA
Sbjct: 116 VFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHL 175
Query: 151 SADIAALPQGRELHGFSWR-------HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
A AA+ GRE H F+ + RF N AL+ MYA+ GLV A+ LF
Sbjct: 176 PAAAAAVRLGREAHAFALKNGLLHGHQRFAFN-----ALLSMYARLGLVADAQRLFAGAT 230
Query: 204 EKR--VVSWNAMITGYAMHGHSTKALD-LFEKMKDEVQPDHITFVGVLSACSRGGLFDEG 260
R VV+WN M++ G +A+ L++ + V+PD +TF L ACSR L D G
Sbjct: 231 PGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVG 290
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLG---HSGRLDEACDLIMQMRVKPDP----GVWG 313
R +++D + + + +VD+ G+ + D++ PD G+W
Sbjct: 291 REMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV------PDSGKQLGMWN 344
Query: 314 ALL 316
A++
Sbjct: 345 AMI 347
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/545 (37%), Positives = 319/545 (58%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G FH + L+ +YS + A ++ +P ++F +N++I NG A+E+
Sbjct: 159 GLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVL 218
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+++ +V DN T+ A CS L + G ++H + R E D FV +A+IDMY KC
Sbjct: 219 DRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKC 278
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
++NAR+VF+++ ++ P+E T ++
Sbjct: 279 GNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLL 338
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
++ A I+AL G+ LH + FE ++ V AL++MY+K G ++ A +F ++ + +
Sbjct: 339 NSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSI 398
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W+AMI G + HG +AL +F++M + P ++TFVGVLSAC+ G EG + +
Sbjct: 399 TWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQL 458
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
++ I+P V+HYTC+V LL +GRLDEA + + VK D W LL++C +H + L
Sbjct: 459 MKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGL 518
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
+ E +++++P D G Y++LSN+YA+A W+GV K+RKLM +R +KK SWIE++N
Sbjct: 519 GKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRN 578
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
H F+S +HP ++IY K++ L ++ GYVP +VFHDVE+++K + HSE+
Sbjct: 579 SIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEK 638
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIA+GL+ TP G + + KNL++C DCH A+K ISK+T R I VRD NR+H F DG CS
Sbjct: 639 LAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVTNRMIIVRDANRFHCFGDGGCS 698
Query: 508 CGDYW 512
C DYW
Sbjct: 699 CADYW 703
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 187/408 (45%), Gaps = 39/408 (9%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V L++LY+ CD + A LFD + +RN+ W L+ Y NG + L+ ++ +
Sbjct: 63 VQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISV 122
Query: 68 GLV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
+ P+ + F + +CS + EG + H +++ +V ALI MY++ S V
Sbjct: 123 DYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKG 182
Query: 127 ARQVFDKILERD----------------PSEA-----------------TLVTVISASAD 153
A V+ ++ D PSEA T VT +
Sbjct: 183 AMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSH 242
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+ L G ++H +R E + V +A++DMY KCG + AR +F +L+ K VVSW A+
Sbjct: 243 LKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAI 302
Query: 214 ITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
+ Y+ +G +AL+ F +M+ D + P+ TF +L++C+ G++ + ++
Sbjct: 303 LAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKL-LHTRIKKSG 361
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
+ + ++++ SG ++ A + ++M + D W A++ HG + A +
Sbjct: 362 FEDHIIVGNALINMYSKSGSIEAAHKVFLEMICR-DSITWSAMICGLSHHGLGREALVVF 420
Query: 333 EKLIELE--PHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
++++ + PH +LS + EG L +LM GI+ +
Sbjct: 421 QEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGV 468
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 5/126 (3%)
Query: 139 PSEATLVTVISASADIAALPQGRELHG--FSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
P E T + ++ SAD L G+ +H + N+ +L+++YAKC + VAR
Sbjct: 24 PLEHT-IQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVAR 82
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRG 254
LF+ +R++ VVSW A++ GY +G + L LF+ M D ++P+ F ++S+CS
Sbjct: 83 ILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDS 142
Query: 255 GLFDEG 260
G EG
Sbjct: 143 GQVVEG 148
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/538 (37%), Positives = 313/538 (58%), Gaps = 36/538 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL- 69
+++ Y + + +LF +P RN+ W +I +G E A+ L+ +++ G+
Sbjct: 139 NSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVE 198
Query: 70 -VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P + T+ + AC+ SA+ +G +IH V + + D ++ AALI YA C + ++
Sbjct: 199 VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSL 258
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+VF L + P++++ + +++ +
Sbjct: 259 RVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLE 318
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL GRE+H + + E +V V +L+ MY +CG + +F+++ +K +VSWN++I
Sbjct: 319 ALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIV 378
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G A HG AL F +M + V+PD ITF G+LSACS G+ +GR F+ + +
Sbjct: 379 GCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAE 438
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
+ HY CMVD+LG SG+L+EA +LI M VK + VW LL++C +H +++AE A +
Sbjct: 439 VKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKC 498
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
+I+LEPH + YV+LSN+YA A+ W V+++R+ M RGI K SWI +K + FLS
Sbjct: 499 IIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLS 558
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD SHP+ D IY KL+WL G++KE GYVP HDVE+++K M+ HSERLAI FGL
Sbjct: 559 GDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGL 618
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I+T +G+ + + KNL++C DCH AIK I+KI R+I VRD R+HHF DG CSCGDYW
Sbjct: 619 ISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 676
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 143/314 (45%), Gaps = 25/314 (7%)
Query: 20 CDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFA 79
C L A +LFD +P+R++ W +I + G EVA L+Y++ D +
Sbjct: 86 CADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMP----FRDIAAWNSM 141
Query: 80 LKACSALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYAKCSCVVNA-RQVFDKILER 137
+ +E+G R+ +++ RN +G +D + + + RQ+ +E
Sbjct: 142 IYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGG--LDQHGRSEEALGLFRQMMGCGVEV 199
Query: 138 DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
P+ +T VI+A A+ +AL QG ++H ++ + + + AL+ YA C ++ +
Sbjct: 200 KPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLR 259
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGL 256
+F VV W A++TGY ++ AL +F E M++ V P+ +F L++C
Sbjct: 260 VFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEA 319
Query: 257 FDEGRMFFESMVR-----DYHIDPS--VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
D GR + V+ D + S V +Y C G L++ +I + K +
Sbjct: 320 LDWGREIHTAAVKLGLETDVFVGNSLIVMYYRC--------GNLNDGV-VIFKRISKKNI 370
Query: 310 GVWGALLNSCKLHG 323
W +++ C HG
Sbjct: 371 VSWNSVIVGCAQHG 384
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/546 (38%), Positives = 319/546 (58%), Gaps = 42/546 (7%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQ--RNLFLWNVLIRAYAWNGPYEVAIELYYRL-L 65
+A+ LV +Y+ + + A Q+FD +P + L +WN +I YA G E A+ L+ R+
Sbjct: 309 VASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEA 368
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
E G VP T L AC+ A +H V++ + FV AL+DMYA+
Sbjct: 369 EAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTD 428
Query: 126 NARQVFDKI--------------------------LERD----------PSEATLVTVIS 149
AR++F + L R+ P+ TL+T++
Sbjct: 429 VARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLP 488
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A +AA +G+E+HG++ RH + +V V +ALVDMYAKCG + ++R +F++L + ++
Sbjct: 489 GCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTIT 548
Query: 210 WNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
WN +I Y MHG +A LF++M E +P+ +TF+ L+ACS G+ D G F +M
Sbjct: 549 WNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAM 608
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV-KPDPGVWGALLNSCKLHGHVK 326
RD+ ++P+ C+VD+LG +GRLDEA ++ M + W +L +C+LH +V
Sbjct: 609 ERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVH 668
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
L E+A E+L+ELEP +A +YV+L NIY+ A W A++R M RG+ K CSWIEV
Sbjct: 669 LGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVD 728
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
H F++G+++HP +E++A ++ L G M GY P T V HD+++ +KA ++ CHSE
Sbjct: 729 GAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSE 788
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LAIAFGL+ G + + KNL++C+DCH A KF+SK+ REI +RDV R+HHF++G C
Sbjct: 789 KLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQC 848
Query: 507 SCGDYW 512
SCGDYW
Sbjct: 849 SCGDYW 854
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 157/381 (41%), Gaps = 50/381 (13%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQR--NLFLWNVLIRAYAWNGPYEVAIELYYRL 64
P +A L+ Y+ C L A ++F I + +N LI A ++ A+ +
Sbjct: 94 PAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAM 153
Query: 65 LEIGLVPDNFTFPFALKACS----ALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMY 118
L G +FT L+A S A +A+ GR H ++N F AL+ MY
Sbjct: 154 LAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMY 213
Query: 119 AKCSCVVNARQVF--------------------------DKILER---------DPSEAT 143
A+ V +A+++F D+ ++ P T
Sbjct: 214 ARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVT 273
Query: 144 LVTVISASADIAALPQGRELHGFSWRH-RFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
+ + A + + L GRE+H + + N V +ALVDMYA V AR +F+ +
Sbjct: 274 FASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV 333
Query: 203 RE--KRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ--PDHITFVGVLSACSRGGLFD 258
+ K++ WNAMI GYA G +AL LF +M+ E P T VL AC+R F
Sbjct: 334 PDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAF- 392
Query: 259 EGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
G+ V + + ++D+ G+ D A I M PD W L+
Sbjct: 393 AGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVA-RRIFAMVDLPDVVSWNTLITG 451
Query: 319 CKLHGHVKLAELALEKLIELE 339
C + GHV A ++ +LE
Sbjct: 452 CVVQGHVADAFQLAREMQQLE 472
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 122/303 (40%), Gaps = 69/303 (22%)
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYAKCSCVVNARQ 129
D+ P A+K+ +AL R IH +R V AL+ YA+C + A +
Sbjct: 56 DHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALE 115
Query: 130 VFDKILERDPSEATLVTVISA--------------------------------------- 150
VF I + + ++ISA
Sbjct: 116 VFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHL 175
Query: 151 SADIAALPQGRELHGFSWR-------HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
A AA+ GRE H F+ + RF N AL+ MYA+ GLV A+ LF
Sbjct: 176 PAAAAAVRLGREAHAFALKNGLLHGHQRFAFN-----ALLSMYARLGLVADAQRLFAGAT 230
Query: 204 EKR--VVSWNAMITGYAMHGHSTKALD-LFEKMKDEVQPDHITFVGVLSACSRGGLFDEG 260
R VV+WN M++ G +A+ L++ + V+PD +TF L ACSR L D G
Sbjct: 231 PGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVG 290
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLG---HSGRLDEACDLIMQMRVKPDP----GVWG 313
R +++D + + + +VD+ G+ + D++ PD G+W
Sbjct: 291 REMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV------PDSGKQLGMWN 344
Query: 314 ALL 316
A++
Sbjct: 345 AMI 347
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/413 (46%), Positives = 282/413 (68%), Gaps = 5/413 (1%)
Query: 105 ETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP----SEATLVTVISASADIAALPQG 160
E DV ++I +YA+ A ++ K+L + L V+ A A A+ G
Sbjct: 262 ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTG 321
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMH 220
+ +H R E NV V T++VDMY+KCG V++A F +++EK ++SW+AMITGY MH
Sbjct: 322 KRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMH 381
Query: 221 GHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQH 279
G +AL++F +MK ++P++ITF+ VL+ACS GL DEGR ++ +M +++ I+ V+H
Sbjct: 382 GRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEH 441
Query: 280 YTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
Y CMVDLLG +G LDEA LI +M+VKPD +WGALL++C++H +V+LAE+++++L EL+
Sbjct: 442 YGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELD 501
Query: 340 PHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASH 399
++G YV+LSNIYA A W+ V ++R L+ R I+K S E+K K + F GD SH
Sbjct: 502 ASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSH 561
Query: 400 PNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPD 459
P EIY+ L+ L RM+EAGYVP T SV HD++ +EK + + HSE+LA+AF L+N+
Sbjct: 562 PQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVP 621
Query: 460 GTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ + I KNL++C DCH A+KFI+KITEREI +RD+ R+HHFKDG+CSC DYW
Sbjct: 622 RSVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 674
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 150/323 (46%), Gaps = 38/323 (11%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG--LVPDNFTFPFAL 80
L A ++FD + +R++ WN +I YA NG AI LY ++L +G + + L
Sbjct: 251 LEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVL 309
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPS 140
AC+ AI+ G+RIH V+R E +V+VG +++DMY+KC V A + F KI E++
Sbjct: 310 LACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKN-- 367
Query: 141 EATLVTVISASADIAAL---PQGRE-LHGFSWRHRFELNVKVKTALVDMYAKC---GLVK 193
++S SA I +G+E L F+ R L T + + A C GL+
Sbjct: 368 ------ILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYIT-FISVLAACSHAGLLD 420
Query: 194 VARNLFEQLR-----EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVL 248
R + ++ E V + M+ G +A L ++MK V+PD + +L
Sbjct: 421 EGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMK--VKPDAAIWGALL 478
Query: 249 SACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD----LIMQMR 304
SAC + M S+ R + +D S Y ++ + R+ + + L+ R
Sbjct: 479 SACRIHKNVELAEM---SVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRR 535
Query: 305 VKPDPGVWGALLNSCKLHGHVKL 327
++ PG +S +L G + L
Sbjct: 536 IEKPPG-----YSSFELKGKIYL 553
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 121/247 (48%), Gaps = 16/247 (6%)
Query: 118 YAKCSCVVNARQVFDKILERDPS----EATLVTVISASADIAALPQGRELHGFSWRHRFE 173
Y + + V ++ ++F ++ D + EA + SASA + LH + FE
Sbjct: 171 YVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFE 230
Query: 174 LNVKVKTALVDMYAKCGL--VKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
N V ++D YAK G ++VAR +F+ + E+ VVSWN+MI YA +G S +A+ L+
Sbjct: 231 RNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYS 289
Query: 232 KMKD---EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
KM + ++ + + VL AC+ G G+ +VR ++ +V T +VD+
Sbjct: 290 KMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVR-MGLEENVYVGTSIVDMYS 348
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHD-AGNYV 347
GR++ A +++ K + W A++ +HG + ALE E++ NY+
Sbjct: 349 KCGRVEMASRAFRKIKEK-NILSWSAMITGYGMHGR---GQEALEIFTEMKRSGLRPNYI 404
Query: 348 ILSNIYA 354
++ A
Sbjct: 405 TFISVLA 411
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 15/214 (7%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG + + T +V +YS C + A + F +I ++N+ W+ +I Y +G + A+E+
Sbjct: 331 MGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEI 390
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG----AALID 116
+ + GL P+ TF L ACS ++EGR + + K E + G ++D
Sbjct: 391 FTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAM---KQEFGIEAGVEHYGCMVD 447
Query: 117 MYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL-- 174
+ + C+ A + K ++ P A ++SA + + EL S + FEL
Sbjct: 448 LLGRAGCLDEAYSLI-KEMKVKPDAAIWGALLSA----CRIHKNVELAEMSVKRLFELDA 502
Query: 175 -NVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
N L ++YA+ + K + ++ +R+
Sbjct: 503 SNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRI 536
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/545 (36%), Positives = 313/545 (57%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF ++ L+ +YS CL A ++ + + +R++ W +I Y + E A+ +
Sbjct: 376 GFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATF 435
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + G+ PDN A AC+ + A+ +G +IH V + + D+ + L+++YA+C
Sbjct: 436 KEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARC 495
Query: 122 SCVVNARQVFDKILERDP---------------------------------SEATLVTVI 148
A +F +I +D + T ++ I
Sbjct: 496 GRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAI 555
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A++A + QG+++HG + + +V AL+ +Y KCG ++ A+ +F ++ + V
Sbjct: 556 SALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEV 615
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWN +IT + HG +ALDLF++MK E ++P+ +TF+GVL+ACS GL +EG +F+SM
Sbjct: 616 SWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSM 675
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
Y ++P HY C+VD+LG +G+LD A + +M + + +W LL++CK+H ++++
Sbjct: 676 SNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEI 735
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
ELA + L+ELEPHD+ +YV+LSN YA W ++RK+M DRGI+K SWIEVKN
Sbjct: 736 GELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKN 795
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
HAF GD HP D+IY L L R+ + GY ++FH+ E ++K HSE+
Sbjct: 796 AVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEK 855
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+AFGL+ P L + KNL++CDDCH +K S++T REI +RDV R+HHF G CS
Sbjct: 856 LAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKCTSEVTRREIVLRDVYRFHHFNSGSCS 915
Query: 508 CGDYW 512
CGDYW
Sbjct: 916 CGDYW 920
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 169/356 (47%), Gaps = 36/356 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G F + L+ LY C + AH +F+ + N+ LWN+++ AY + E++
Sbjct: 275 GMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIF 334
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ G+ P+ FT+P L+ C+ IE G +IH I+N +E+D++V LIDMY+K
Sbjct: 335 GQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKY 394
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
C+ AR++ + + +RD P L +
Sbjct: 395 GCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAA 454
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A I A+ QG ++H + + ++ + LV++YA+CG + A +LF ++ K +
Sbjct: 455 SACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEI 514
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WN +I+G+ +AL +F KM + + + TF+ +SA + +G+
Sbjct: 515 TWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRA 574
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
V+ H + + ++ L G G +++A + +M ++ + W ++ SC HG
Sbjct: 575 VKTGHTSET-EVANALISLYGKCGSIEDAKMIFSEMSLRNEVS-WNTIITSCSQHG 628
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 173/401 (43%), Gaps = 43/401 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G G ++ L+ LY+ + A Q+F + R+ W ++ YA +G + A LY
Sbjct: 73 GLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLY 132
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY--- 118
++ ++P + L AC+ +GR IH V + + ++ FVG ALI +Y
Sbjct: 133 SQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGF 192
Query: 119 ----------------------------AKCSCVVNARQVFDKILERD--PSEATLVTVI 148
A+C A Q+FD++ P T+ +++
Sbjct: 193 GSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLL 252
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A A + L +G++LH + + + + +L+D+Y KCG ++ A ++F VV
Sbjct: 253 AACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVV 312
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
WN M+ Y K+ ++F +M+ + P+ T+ +L C+ G + G
Sbjct: 313 LWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLS 372
Query: 268 VRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+++ + D V ++D+ G LD+A I++M K D W +++ H
Sbjct: 373 IKNGFESDMYVS--GVLIDMYSKYGCLDKA-RKILEMLEKRDVVSWTSMIAGYVQH---D 426
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRK 367
E AL E++ D G + + + A+ G+ +R+
Sbjct: 427 FCEEALATFKEMQ--DCGVWPDNIGLASAASACAGIKAMRQ 465
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
P E+H S + + L+D+YAK GLV AR +F++L + VSW AM++GY
Sbjct: 60 PLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGY 119
Query: 218 AMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRM 262
A G +A L+ +M V P VLSAC++G LF +GRM
Sbjct: 120 AQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRM 165
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/533 (37%), Positives = 305/533 (57%), Gaps = 35/533 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
L+ +Y + A +F + R++ W +I N + A+E Y + G +
Sbjct: 275 NSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTM 334
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD T L AC++L ++ G ++HE R V V +LIDMY+KC + A ++
Sbjct: 335 PDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEI 394
Query: 131 FDKILERD--------------------------------PSEATLVTVISASADIAALP 158
F +I ++D P+ TL++ +SA A + AL
Sbjct: 395 FHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKSKPNSVTLISALSACARVGALM 454
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
G+E+H + + + + A++D+Y +CG ++ A N F L EK V +WN ++TGYA
Sbjct: 455 CGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQF-NLNEKDVGAWNILLTGYA 513
Query: 219 MHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
G ++LF++M + E+ PD +TF+ +L ACSR G+ EG +F+ M +YHI P++
Sbjct: 514 QKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNL 573
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+HY C+VDLLG +G+L+EA + I +M +KPDP +WGALLN+C++H HV L ELA + + +
Sbjct: 574 KHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFK 633
Query: 338 LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDA 397
+ G Y++L N+YA + W+ VAK+R+ M + G+ CSW+EVK K HAFLSGD
Sbjct: 634 QDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGDN 693
Query: 398 SHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINT 457
HP EI L+ +MK +G+ G E D KA++ C HSER AIA+ LIN+
Sbjct: 694 FHPQMQEINVVLEGFYEKMKTSGF-NGQECSSMDGIQTSKADIFCGHSERQAIAYSLINS 752
Query: 458 PDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGD 510
G + +TKNL +C CH +KFISKI REI+VRD ++HHFKDG+CSCGD
Sbjct: 753 APGMPIWVTKNLYMCQSCHSTVKFISKIVRREISVRDTEQFHHFKDGLCSCGD 805
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 177/364 (48%), Gaps = 40/364 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+ ++ + NA +F R+ +R+LF WNVL+ Y G ++ A+ LY+R+L G
Sbjct: 71 LGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAG 130
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD +TFP L++C+ + GR +H V+R ++ DV V ALI MY KC VV+AR
Sbjct: 131 IRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSAR 190
Query: 129 QVFDKILER---------------------------------DPSEATLVTVISASADIA 155
+FDK+ R DP T+ +VISA +
Sbjct: 191 MLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLG 250
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
G +LH + R ++ N+ V +L+ MY G K A ++F + + VVSW +I+
Sbjct: 251 DERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIIS 310
Query: 216 GYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G + KAL+ ++ M+ PD +T VLSAC+ G D G E R HI
Sbjct: 311 GCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHIL 370
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGHVKLAELAL 332
V + ++D+ R+++A ++ Q+ PD V W +++N +++ A +
Sbjct: 371 YVVVANS-LIDMYSKCKRIEKALEIFHQI---PDKDVISWTSVINGLRINNRCFEALIFF 426
Query: 333 EKLI 336
K+I
Sbjct: 427 RKMI 430
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G GF L ++ LY C + A F+ + ++++ WN+L+ YA G + +EL+
Sbjct: 467 GMGFDGFLPNAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELF 525
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
R++E + PD+ TF L ACS + EG
Sbjct: 526 KRMVESEINPDDVTFISLLCACSRSGMVTEG 556
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
L+V++ AL+ M+ + G V A N+F ++ E+ + SWN ++ GY G +AL L+ ++
Sbjct: 67 LSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRI 126
Query: 234 K-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSV 277
++PD TF VL +C+ GR +VR D+ +D V
Sbjct: 127 LWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDV 172
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/565 (36%), Positives = 310/565 (54%), Gaps = 66/565 (11%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ Y ++ A +LFD++P RN W +I YA NG E A+ L L G++P
Sbjct: 359 LITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPS 418
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF- 131
+ ACS + A+E G ++H ++ + + F ALI MY KC + ARQVF
Sbjct: 419 LSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFS 478
Query: 132 ------------------------------DKILERD----------------------- 138
D +L RD
Sbjct: 479 RMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGA 538
Query: 139 ----------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
P+ L ++ + A G+++H + + + + V AL+ MY K
Sbjct: 539 FKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFK 598
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGV 247
CG +R +F+ + E+ + +WN +ITGYA HG +A+ +++ M+ V P+ +TFVG+
Sbjct: 599 CGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGL 657
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
L+ACS GL DEG FF+SM +DY + P +HY CMVDLLG +G + A I M ++P
Sbjct: 658 LNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEP 717
Query: 308 DPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRK 367
D +W ALL +CK+H + ++ + A EKL +EP +AGNYV+LSNIY+ W VA++RK
Sbjct: 718 DTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRK 777
Query: 368 LMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTES 427
+M +G+ K CSW ++K+K H+F++GD H +EI A L+ L +K GYVP TE
Sbjct: 778 IMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEF 837
Query: 428 VFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITE 487
V HD++ ++K + + HSE+LA+A+ L+ TP G + I KNL+IC DCH IKF+S +T+
Sbjct: 838 VLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTK 897
Query: 488 REITVRDVNRYHHFKDGICSCGDYW 512
R+I +RD NR+HHF++G CSC D+W
Sbjct: 898 RQIDIRDGNRFHHFRNGSCSCEDFW 922
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 141/262 (53%), Gaps = 15/262 (5%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+A LF+++P+RNL W V+I Y + A +++ ++ GL+PD F AL A
Sbjct: 176 DARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVK 235
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN-ARQVFDKILERDPSEAT 143
L ++ + ++ +E DV +G A++++Y++ + V++ A + F+ ++ER+ E T
Sbjct: 236 GLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERN--EYT 293
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFE--LNVKVKTALVDMYAKCGLVKVARNLFEQ 201
T+I AAL G + + + ++ +TAL+ A+CG + AR LFEQ
Sbjct: 294 WSTMI------AALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQ 347
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGR 261
+ E VVSWNA+ITGY +G +A +LF+KM + I++ G+++ ++ G +E
Sbjct: 348 IPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFR---NTISWAGMIAGYAQNGRSEEAL 404
Query: 262 MFFESMVRDYHIDPSVQHYTCM 283
+ + R + PS+ T +
Sbjct: 405 GLLQELHRSGML-PSLSSLTSI 425
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 140/375 (37%), Gaps = 113/375 (30%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A ++FD +P+R++ WN +I AY NG + A +LY + + T L
Sbjct: 53 AREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR----TGAILLSGYGR 108
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLV 145
L + E RR+ + ++ E + A+I Y + + AR++FD + RD S
Sbjct: 109 LGRVLEARRVFDGML----ERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVS----- 159
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
SW +++ Y + ARNLFE++ E+
Sbjct: 160 ---------------------SW-----------NSMLTGYCHSLQMVDARNLFEKMPER 187
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGG--------- 255
+VSW MI+GY + KA D+F KM E + PD F LSA G
Sbjct: 188 NLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLR 247
Query: 256 ---------------------------LFDEGRMFFESMVRD------------------ 270
+ D FFESM+
Sbjct: 248 VLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRI 307
Query: 271 ------YHIDP--SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCK 320
Y DP S+ T ++ L GR+D+A L Q+ P+P V W AL+
Sbjct: 308 DAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQI---PEPIVVSWNALITGYM 364
Query: 321 LHGHVKLAELALEKL 335
+G V A+ +K+
Sbjct: 365 QNGMVNEAKELFDKM 379
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 74/140 (52%), Gaps = 3/140 (2%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G ++A L+ +Y C C ++ ++FD + +R++F WN +I YA +G AI++
Sbjct: 580 LGMDSELIVANALISMYFKCGCA-DSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKM 638
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG-AALIDMYA 119
Y + G++P+ TF L ACS ++EG + + + ++ T + A ++D+
Sbjct: 639 YQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLG 698
Query: 120 KCSCVVNARQ-VFDKILERD 138
+ V A Q ++D +E D
Sbjct: 699 RTGDVQGAEQFIYDMPIEPD 718
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 10/153 (6%)
Query: 166 FSWRHRF-ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST 224
F+ RH EL V +A + + G V AR +F+ + + +++WN+MI+ Y +G
Sbjct: 23 FAVRHAHGELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPD 82
Query: 225 KALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMV 284
A DL++ + + T +LS R G E R F+ M ++ + + M+
Sbjct: 83 AARDLYDAISG---GNMRTGAILLSGYGRLGRVLEARRVFDGM-----LERNTVAWNAMI 134
Query: 285 DLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
+G + A L M + D W ++L
Sbjct: 135 SCYVQNGDITMARRLFDAMPSR-DVSSWNSMLT 166
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/547 (38%), Positives = 311/547 (56%), Gaps = 35/547 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G G + T LV +YS +A +FD + R+L WN +I Y NG + L
Sbjct: 275 LGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYAL 334
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ RL++ G D+ T ++ CS S +E GR +H +IR + E+ + + A++DMY+K
Sbjct: 335 FRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSK 394
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + A VF ++ +++ + TLV++
Sbjct: 395 CGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSL 454
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE-QLREKR 206
+ A + +L +GR +H RH + + + +AL+DMYAKCG + A LF + K
Sbjct: 455 VHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKD 514
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V+ N+MI GY MHGH AL ++ +M +E ++P+ TFV +L+ACS GL +EG+ F
Sbjct: 515 VILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFH 574
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
SM RD+ + P +HY C+VDL +GRL+EA +L+ QM +P V ALL+ C+ H +
Sbjct: 575 SMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNT 634
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+ ++LI L+ ++G YV+LSNIYA A WE V +R LM +G+KK S IEV
Sbjct: 635 NMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEV 694
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
NK + F + D SHP+ +IY L+ L ++ GY+P T V DV K ++ HS
Sbjct: 695 GNKVYTFFASDDSHPSWADIYQLLENLRLEVEAEGYIPDTSCVLRDVNEPMKVKLLWGHS 754
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
ERLAIAFGL++TP G+ + ITKNL++C DCH K+ISKI +REI VRD NR+HHF +G
Sbjct: 755 ERLAIAFGLLSTPCGSLIKITKNLRVCVDCHNVTKYISKIVQREIIVRDANRFHHFVNGK 814
Query: 506 CSCGDYW 512
CSC D+W
Sbjct: 815 CSCNDFW 821
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 186/419 (44%), Gaps = 42/419 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF H + + +V+ L +A ++FD +P++++ WN +I Y G + +I+++
Sbjct: 175 GFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMF 234
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ GL P T LKAC + G H V+ DVFV +L+DMY+
Sbjct: 235 LEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNL 294
Query: 122 SCVVNARQVFDKILERDP---------------------------------SEATLVTVI 148
+A VFD + R TLV++I
Sbjct: 295 GDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLI 354
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+ + L GR LH R E ++ + TA+VDMY+KCG +K A +F ++ +K V+
Sbjct: 355 RGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVI 414
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W AM+ G + +G++ AL LF +M++E V + +T V ++ C+ G +GR
Sbjct: 415 TWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHF 474
Query: 268 VR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+R Y D + + ++D+ G++ A L D + +++ +HGH +
Sbjct: 475 IRHGYAFDAVIT--SALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGR 532
Query: 327 LAELALEKLIE--LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIK---KSIAC 380
A ++IE L+P+ +L+ EG A + D ++ K AC
Sbjct: 533 YALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYAC 591
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 173/395 (43%), Gaps = 40/395 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
LA KL+ +YS L +A +FD+ + N +I + N + L+ +
Sbjct: 81 LAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCD 140
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ +++T FALKAC+ L E G I +R + ++VG+++++ K + +A+
Sbjct: 141 IEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQ 200
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+VFD + E+D PS T+ ++ A
Sbjct: 201 KVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSG 260
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
G H + +V V T+LVDMY+ G A +F+ + + ++SWNAMI+
Sbjct: 261 LKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMIS 320
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GY +G ++ LF ++ + D T V ++ CS+ + GR+ ++R ++
Sbjct: 321 GYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRK-ELE 379
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
+ T +VD+ G + +A + +M K + W A+L +G+ AE AL+
Sbjct: 380 SHLVLSTAIVDMYSKCGAIKQATIVFGRMG-KKNVITWTAMLVGLSQNGY---AEDALKL 435
Query: 335 LIELEPHD-AGNYVILSNIYARAANWEGVAKLRKL 368
+++ A N V L ++ A+ + K R +
Sbjct: 436 FCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTV 470
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 136/324 (41%), Gaps = 37/324 (11%)
Query: 93 RRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI------------------ 134
+ IH +I+N T+ F+ A LI +Y+ + +AR VFD+
Sbjct: 64 KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRN 123
Query: 135 ---------------LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
+ + + T + + A D+ G E+ + R F L++ V
Sbjct: 124 QQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVG 183
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQ 238
+++V+ K G + A+ +F+ + EK VV WN++I GY G +++ +F E + ++
Sbjct: 184 SSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLR 243
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
P +T +L AC + GL G M S V + V T +VD+ + G A
Sbjct: 244 PSPVTMANLLKACGQSGLKKVG-MCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAA- 301
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL-EPHDAGNYVILSNIYARAA 357
L+ W A+++ +G + + +L++ D+G V L ++ +
Sbjct: 302 LVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTS 361
Query: 358 NWEGVAKLRKLMIDRGIKKSIACS 381
+ E L +I + ++ + S
Sbjct: 362 DLENGRILHSCIIRKELESHLVLS 385
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/518 (39%), Positives = 302/518 (58%), Gaps = 12/518 (2%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + LV +Y C L A + D + +R++ WN L+ YA N ++ A+E+
Sbjct: 169 VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEV 228
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + + D T L A S + E +D+ + + +I +Y K
Sbjct: 229 CREMESVKISHDAGTMASLLPAVS--NTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMK 286
Query: 121 CSCVVNARQVFDKILERD---PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
+ V A +++ + +E D P ++ +V+ A D +AL G+++HG+ R + N+
Sbjct: 287 NAMPVEAVELYSR-MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE- 236
++ AL+DMYAKCG ++ AR++FE ++ + VVSW AMI+ Y G A+ LF K++D
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+ PD I FV L+ACS GL +EGR F+ M Y I P ++H CMVDLLG +G++ EA
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 465
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARA 356
I M ++P+ VWGALL +C++H + LA +KL +L P +G YV+LSNIYA+A
Sbjct: 466 YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKA 525
Query: 357 ANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRM 416
WE V +R +M +G+KK+ S +EV H FL GD SHP DEIY +L L +M
Sbjct: 526 GRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKM 585
Query: 417 KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPD-----GTRLLITKNLKI 471
KE GYVP +ES HDVE ++K + HSE+LAI F L+NT + + ITKNL+I
Sbjct: 586 KELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRI 645
Query: 472 CDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
C DCH+A K IS+IT REI +RD NR+H F+ G+CSC
Sbjct: 646 CGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 683
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 160/318 (50%), Gaps = 7/318 (2%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L KL+ Y++ + +A ++FD IP+RN+ + NV+IR+Y NG Y ++++ +
Sbjct: 76 LGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD++TFP LKACS I GR+IH + + +FVG L+ MY KC + AR
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 195
Query: 129 QVFDKILERD-PSEATLVTVISASADI-AALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
V D++ RD S +LV + + AL RE+ H + A+ +
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 255
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFV 245
+ V +++F ++ +K +VSWN MI Y + +A++L+ +M+ D +PD ++
Sbjct: 256 TEN--VMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSIT 313
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
VL AC G+ + R I P++ ++D+ G L++A D+ M+
Sbjct: 314 SVLPACGDTSALSLGKKIHGYIERKKLI-PNLLLENALIDMYAKCGCLEKARDVFENMKS 372
Query: 306 KPDPGVWGALLNSCKLHG 323
+ D W A++++ G
Sbjct: 373 R-DVVSWTAMISAYGFSG 389
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 106/254 (41%), Gaps = 18/254 (7%)
Query: 136 ERDPSEATLV--TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVK 193
++ P E + V+ DI L R +H N + L+ YA V
Sbjct: 35 QKSPQETVFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVA 91
Query: 194 VARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACS 252
AR +F+++ E+ V+ N MI Y +G + + +F M V+PDH TF VL ACS
Sbjct: 92 SARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACS 151
Query: 253 RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
G GR S + + ++ +V + G G L EA L++ + D W
Sbjct: 152 CSGTIVIGRKIHGSATK-VGLSSTLFVGNGLVSMYGKCGFLSEA-RLVLDEMSRRDVVSW 209
Query: 313 GALLNSCKLHGHVKLAELALEKLIELE----PHDAGNYVILSNIYARAANWEGVAKLRKL 368
+L+ + + + ALE E+E HDAG L + E V ++ +
Sbjct: 210 NSLVVG---YAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTT-ENVMYVKDM 265
Query: 369 MIDRGIKKSIACSW 382
G KKS+ SW
Sbjct: 266 FFKMG-KKSLV-SW 277
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/546 (38%), Positives = 319/546 (58%), Gaps = 42/546 (7%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQ--RNLFLWNVLIRAYAWNGPYEVAIELYYRL-L 65
+A+ LV +Y+ + + A Q+FD +P + L +WN +I YA G E A+ L+ R+
Sbjct: 157 VASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEA 216
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
E G VP T L AC+ A +H V++ + FV AL+DMYA+
Sbjct: 217 EAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTD 276
Query: 126 NARQVFDKI--------------------------LERD----------PSEATLVTVIS 149
AR++F + L R+ P+ TL+T++
Sbjct: 277 VARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLP 336
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A +AA +G+E+HG++ RH + +V V +ALVDMYAKCG + ++R +F++L + ++
Sbjct: 337 GCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTIT 396
Query: 210 WNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
WN +I Y MHG +A LF++M E +P+ +TF+ L+ACS G+ D G F +M
Sbjct: 397 WNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAM 456
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV-KPDPGVWGALLNSCKLHGHVK 326
RD+ ++P+ C+VD+LG +GRLDEA ++ M + W +L +C+LH +V
Sbjct: 457 ERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVH 516
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
L E+A E+L+ELEP +A +YV+L NIY+ A W A++R M RG+ K CSWIEV
Sbjct: 517 LGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVD 576
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
H F++G+++HP +E++A ++ L G M GY P T V HD+++ +KA ++ CHSE
Sbjct: 577 GAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSE 636
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LAIAFGL+ G + + KNL++C+DCH A KF+SK+ REI +RDV R+HHF++G C
Sbjct: 637 KLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQC 696
Query: 507 SCGDYW 512
SCGDYW
Sbjct: 697 SCGDYW 702
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 158/354 (44%), Gaps = 45/354 (12%)
Query: 13 LVHLYSACDCLHNAHQLF-DRIPQR-NLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
L+ +Y+ + +A +LF P R ++ WN ++ +G ++ A++ Y ++ +G+
Sbjct: 57 LLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVR 116
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIR-NKWETDVFVGAALIDMYAKCSCVVNARQ 129
PD TF AL ACS L ++ GR +H VI+ ++ + FV +AL+DMYA V ARQ
Sbjct: 117 PDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQ 176
Query: 130 VFDKILERD------------------------------------PSEATLVTVISASAD 153
VFD + + P E T+ +V+ A A
Sbjct: 177 VFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACAR 236
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
A +HG+ + N V+ AL+DMYA+ G VAR +F + VVSWN +
Sbjct: 237 SEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTL 296
Query: 214 ITGYAMHGHSTKALDLFEKMKD----EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
ITG + GH A L +M+ V P+ IT + +L C+ G+ VR
Sbjct: 297 ITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVR 356
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+ +D V + +VD+ G L + + + W L+ + +HG
Sbjct: 357 -HALDTDVAVGSALVDMYAKCGCL-ALSRAVFDRLPRRNTITWNVLIMAYGMHG 408
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 130/313 (41%), Gaps = 48/313 (15%)
Query: 73 NFTFPFALKACS----ALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYAKCSCVVN 126
+FT L+A S A +A+ GR H ++N F AL+ MYA+ V +
Sbjct: 10 SFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVAD 69
Query: 127 ARQVF--------------------------DKILER---------DPSEATLVTVISAS 151
A+++F D+ ++ P T + + A
Sbjct: 70 AQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPAC 129
Query: 152 ADIAALPQGRELHGFSWRH-RFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE--KRVV 208
+ + L GRE+H + + N V +ALVDMYA V AR +F+ + + K++
Sbjct: 130 SRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLG 189
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQ--PDHITFVGVLSACSRGGLFDEGRMFFES 266
WNAMI GYA G +AL LF +M+ E P T VL AC+R F G+
Sbjct: 190 MWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAF-AGKEAVHG 248
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
V + + ++D+ G+ D A I M PD W L+ C + GHV
Sbjct: 249 YVVKRGMAGNRFVQNALMDMYARLGKTDVA-RRIFAMVDLPDVVSWNTLITGCVVQGHVA 307
Query: 327 LAELALEKLIELE 339
A ++ +LE
Sbjct: 308 DAFQLAREMQQLE 320
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/543 (37%), Positives = 321/543 (59%), Gaps = 39/543 (7%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNG---PYEVAIELYYRL 64
V+ ++ +Y+ C L A Q+FD + +++ W +I Y+ +G A+ L+ +
Sbjct: 127 VIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEM 186
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
+ GL P+ F +K C L + +G++IH + ++ +VFVG++L+DMYA+C +
Sbjct: 187 VRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGEL 246
Query: 125 VNARQVFDKILERD---------------------------------PSEATLVTVISAS 151
+R VFD++ ++ +E T ++ +S
Sbjct: 247 RESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSS 306
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+ +L QG+ LH + +L V L+ MYAK G + A+ +F++L + VVS N
Sbjct: 307 STTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCN 366
Query: 212 AMITGYAMHGHSTKALDLFEKMK--DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
+M+ GYA HG +A++LFE+M E++P+ ITF+ VL+ACS GL DEG +FE +++
Sbjct: 367 SMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFE-LMK 425
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
Y ++P + HYT +VDL G +G LD+A I +M ++P+ +WGALL + K+H + ++
Sbjct: 426 KYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGA 485
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
A +K++EL+P G + +LSNIYA A W+ VAK+RK M D G+KK ACSW+E++N
Sbjct: 486 YAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSV 545
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLA 449
H F + D SHP +++Y + L ++KE GYVP T V V+ EK + HSE+LA
Sbjct: 546 HIFSANDISHPQKNKVYEMWENLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLA 605
Query: 450 IAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
+AF L+NT G+ + I KN+++C DCH AIK++S + +REI VRD NR+HHF+DG CSC
Sbjct: 606 LAFALLNTKPGSVIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCR 665
Query: 510 DYW 512
DYW
Sbjct: 666 DYW 668
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 155/316 (49%), Gaps = 46/316 (14%)
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L PD + LK C+ L +++G+ +H ++ +K+ D+ + +++ MYAKC + AR
Sbjct: 87 LEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIAR 146
Query: 129 QVFDKILERD------------------------------------PSEATLVTVISASA 152
QVFD++ +D P+E L +++
Sbjct: 147 QVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCG 206
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+ + G+++HG W++ F+ NV V ++LVDMYA+CG ++ +R +F++L K VSWNA
Sbjct: 207 FLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNA 266
Query: 213 MITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
+I+G+A G +AL LF KM+ E T+ +L + S G ++G+ M++
Sbjct: 267 LISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKS- 325
Query: 272 HIDPSVQHY--TCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+ Y ++ + SG + +A + ++ VK D ++L HG K A
Sbjct: 326 --GKKLVGYVGNTLLHMYAKSGNICDAKKVFDRL-VKVDVVSCNSMLIGYAQHGLGKEAV 382
Query: 330 LALEKL---IELEPHD 342
E++ +E+EP+D
Sbjct: 383 ELFEEMMLWVEIEPND 398
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 122/259 (47%), Gaps = 39/259 (15%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + + LV +Y+ C L + +FD + +N WN LI +A G E A+ L+
Sbjct: 225 GFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLF 284
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ G FT+ L + S ++E+G+ +H ++++ + +VG L+ MYAK
Sbjct: 285 VKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKS 344
Query: 122 SCVVNARQVFDKILERD----------------------------------PSEATLVTV 147
+ +A++VFD++++ D P++ T ++V
Sbjct: 345 GNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSV 404
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVK--TALVDMYAKCGLVKVARNLFEQLR-E 204
++A + L +G L+ F ++ L K+ T +VD++ + GL+ A++ E++ E
Sbjct: 405 LTACSHAGLLDEG--LYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIE 462
Query: 205 KRVVSWNAMITGYAMHGHS 223
W A++ MH ++
Sbjct: 463 PNATIWGALLGASKMHKNT 481
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 22/221 (9%)
Query: 128 RQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYA 187
R +++K+L+R + L QG+ +H +F ++ +K +++ MYA
Sbjct: 91 RTIYNKLLKR-------------CTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYA 137
Query: 188 KCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH---STKALDLF-EKMKDEVQPDHIT 243
KCG +++AR +F+++ K VV+W +MITGY+ G+ +T AL LF E ++D ++P+
Sbjct: 138 KCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFA 197
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
++ C G +G+ Y +V + +VD+ G L E+ + ++
Sbjct: 198 LSSLVKCCGFLGSCVDGKQ-IHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDEL 256
Query: 304 RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAG 344
K + W AL++ G E AL ++++ G
Sbjct: 257 ESKNEVS-WNALISGFARKGE---GEEALGLFVKMQREGFG 293
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/565 (36%), Positives = 310/565 (54%), Gaps = 66/565 (11%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ Y ++ A +LFD++P RN W +I YA NG E A+ L L G++P
Sbjct: 359 LITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPS 418
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF- 131
+ ACS + A+E G ++H ++ + + F ALI MY KC + ARQVF
Sbjct: 419 LSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFS 478
Query: 132 ------------------------------DKILERD----------------------- 138
D +L RD
Sbjct: 479 RMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGA 538
Query: 139 ----------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
P+ L ++ + A G+++H + + + + V AL+ MY K
Sbjct: 539 FKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFK 598
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGV 247
CG +R +F+ + E+ + +WN +ITGYA HG +A+ +++ M+ V P+ +TFVG+
Sbjct: 599 CGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGL 657
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
L+ACS GL DEG FF+SM +DY + P +HY CMVDLLG +G + A I M ++P
Sbjct: 658 LNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEP 717
Query: 308 DPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRK 367
D +W ALL +CK+H + ++ + A EKL +EP +AGNYV+LSNIY+ W VA++RK
Sbjct: 718 DTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRK 777
Query: 368 LMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTES 427
+M +G+ K CSW ++K+K H+F++GD H +EI A L+ L +K GYVP TE
Sbjct: 778 IMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEF 837
Query: 428 VFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITE 487
V HD++ ++K + + HSE+LA+A+ L+ TP G + I KNL+IC DCH IKF+S +T+
Sbjct: 838 VLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTK 897
Query: 488 REITVRDVNRYHHFKDGICSCGDYW 512
R+I +RD NR+HHF++G CSC D+W
Sbjct: 898 RQIDIRDGNRFHHFRNGSCSCEDFW 922
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 141/262 (53%), Gaps = 15/262 (5%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+A LF+++P+RNL W V+I Y + A +++ ++ GL+PD F AL A
Sbjct: 176 DARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVK 235
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN-ARQVFDKILERDPSEAT 143
L ++ + ++ +E DV +G A++++Y++ + V++ A + F+ ++ER+ E T
Sbjct: 236 GLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERN--EYT 293
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFE--LNVKVKTALVDMYAKCGLVKVARNLFEQ 201
T+I AAL G + + + ++ +TAL+ A+CG + AR LFEQ
Sbjct: 294 WSTMI------AALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQ 347
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGR 261
+ E VVSWNA+ITGY +G +A +LF+KM + I++ G+++ ++ G +E
Sbjct: 348 IPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFR---NTISWAGMIAGYAQNGRSEEAL 404
Query: 262 MFFESMVRDYHIDPSVQHYTCM 283
+ + R + PS+ T +
Sbjct: 405 GLLQELHRSGML-PSLSSLTSI 425
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 140/375 (37%), Gaps = 113/375 (30%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A ++FD +P+R++ WN +I AY NG + A +LY + + T L
Sbjct: 53 AREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR----TGAILLSGYGR 108
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLV 145
L + E RR+ + ++ E + A+I Y + + AR++FD + RD S
Sbjct: 109 LGRVLEARRVFDGML----ERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVS----- 159
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
SW +++ Y + ARNLFE++ E+
Sbjct: 160 ---------------------SW-----------NSMLTGYCHSLQMVDARNLFEKMPER 187
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGG--------- 255
+VSW MI+GY + KA D+F KM E + PD F LSA G
Sbjct: 188 NLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLR 247
Query: 256 ---------------------------LFDEGRMFFESMVRD------------------ 270
+ D FFESM+
Sbjct: 248 VLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRI 307
Query: 271 ------YHIDP--SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCK 320
Y DP S+ T ++ L GR+D+A L Q+ P+P V W AL+
Sbjct: 308 DAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQI---PEPIVVSWNALITGYM 364
Query: 321 LHGHVKLAELALEKL 335
+G V A+ +K+
Sbjct: 365 QNGMVNEAKELFDKM 379
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 74/140 (52%), Gaps = 3/140 (2%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G ++A L+ +Y C C ++ ++FD + +R++F WN +I YA +G AI++
Sbjct: 580 LGMDSELIVANALISMYFKCGCA-DSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKM 638
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG-AALIDMYA 119
Y + G++P+ TF L ACS ++EG + + + ++ T + A ++D+
Sbjct: 639 YQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLG 698
Query: 120 KCSCVVNARQ-VFDKILERD 138
+ V A Q ++D +E D
Sbjct: 699 RTGDVQGAEQFIYDMPIEPD 718
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 10/153 (6%)
Query: 166 FSWRHRF-ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST 224
F+ RH EL V +A + + G V AR +F+ + + +++WN+MI+ Y +G
Sbjct: 23 FAVRHAHGELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPD 82
Query: 225 KALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMV 284
A DL++ + + T +LS R G E R F+ M ++ + + M+
Sbjct: 83 AARDLYDAISG---GNMRTGAILLSGYGRLGRVLEARRVFDGM-----LERNTVAWNAMI 134
Query: 285 DLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
+G + A L M + D W ++L
Sbjct: 135 SCYVQNGDITMARRLFDAMPSR-DVSSWNSMLT 166
>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/535 (38%), Positives = 310/535 (57%), Gaps = 59/535 (11%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
+ NA + FD++P+RNLF W L+ AY +G + A ++ + E LV
Sbjct: 132 MENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGRVFDSMPEWNLV------------ 179
Query: 83 CSALSAIEEGRRIHEDVIRNKW------ETDVFVGAALIDMYAKCSCVVNARQVFDKILE 136
A +A+ G + DV+R K E D+ A++ YA + R++F ++ E
Sbjct: 180 --AWTAMLTGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPE 237
Query: 137 RD--------------------------------------PSEATLVTVISASADIAALP 158
RD P+ T +T++ A + + AL
Sbjct: 238 RDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALA 297
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
+GR++H F+ ++ V ALV+ Y +CG + A+ +F+ +R + V+SW++MI+ +A
Sbjct: 298 EGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFA 357
Query: 219 MHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
G +A++L+ +M E PD I F+ VL ACS G+ + FF S+V D ++P++
Sbjct: 358 QRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTL 417
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+HY CMVD+LG +G+L +A DL+ M P P ++ +L++CKL+ V+ E A E + E
Sbjct: 418 EHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFE 477
Query: 338 LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDA 397
L+P ++ Y+ L+NIY+ A + A++RKLM +RGIKK CSWIEV ++ H F++GD
Sbjct: 478 LDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDK 537
Query: 398 SHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINT 457
HP DEIYA+++ L +MKEAGY T+ V DVE DEK N++ HSE+LAIAFGLI+T
Sbjct: 538 MHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLIST 597
Query: 458 PDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
P G L I KNL++C DCH A K ISK+T REI VRD NR+HHF++G+CSC DYW
Sbjct: 598 PPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFQNGMCSCNDYW 652
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 182/431 (42%), Gaps = 90/431 (20%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
++ +Y+ L NA +FDR+P+ +L W L+ A+A +G +E A L+ + E L+
Sbjct: 29 MLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQERDLI-- 86
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+ L + S IE+ + H D + E D+ A++ A+ + NAR+ FD
Sbjct: 87 --AWTIMLTVLATFSNIEDA-KYHFDQMP---ERDLVAWTAMLAANAERGQMENARETFD 140
Query: 133 KILERDP-SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGL 191
++ ER+ S +L++ S D+ A GR E N+ TA++ Y+ G
Sbjct: 141 QMPERNLFSWTSLLSAYGRSGDVKA--AGRVFDSMP-----EWNLVAWTAMLTGYSLSGD 193
Query: 192 VKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE--------------- 236
V A+ F+ + E+ +++W AM++ YA +GH ++F++M +
Sbjct: 194 VVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAALVEN 253
Query: 237 ----------------------VQPDHITFVGVLSACSRGGLFDEGRMFFESMV-RDYHI 273
+ P+ +TF+ +L ACS G EGR ++ R +
Sbjct: 254 DLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDT 313
Query: 274 DPSVQH-----------------------------YTCMVDLLGHSGRLDEACDLIMQMR 304
D V + ++ M+ GR+DEA +L +M
Sbjct: 314 DLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRML 373
Query: 305 VK---PDPGVWGALLNSCKLHGHVKLAELALEKLI---ELEPHDAGNYVILSNIYARAAN 358
+ PD ++ ++L +C G V+ + ++ ++EP +Y + ++ RA
Sbjct: 374 SEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEP-TLEHYACMVDVLGRAGK 432
Query: 359 WEGVAKLRKLM 369
L +LM
Sbjct: 433 LRDAEDLLRLM 443
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 148/316 (46%), Gaps = 30/316 (9%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFT 75
++ C+ A Q+FD I R+ F W +++ YA +G A ++ R+ L ++T
Sbjct: 1 MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSL--GSWT 58
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL 135
AL + ALS E + D ++ E D+ ++ + A S + +A+ FD++
Sbjct: 59 ---ALLSAFALSGHHEEAKTLFDTMQ---ERDLIAWTIMLTVLATFSNIEDAKYHFDQMP 112
Query: 136 ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
ERD T +++A+A+ + RE ++ E N+ T+L+ Y + G VK A
Sbjct: 113 ERDLVAWT--AMLAANAERGQMENARE----TFDQMPERNLFSWTSLLSAYGRSGDVKAA 166
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGG 255
+F+ + E +V+W AM+TGY++ G +A F+ M + D I + +LSA + G
Sbjct: 167 GRVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPER---DLIAWTAMLSAYAFNG 223
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR--------VKP 307
R F+ M + + + MV L + L+E+ +L +M + P
Sbjct: 224 HLRYTREIFQRMP-----ERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTP 278
Query: 308 DPGVWGALLNSCKLHG 323
+ + LL++C G
Sbjct: 279 NRVTFITLLDACSFLG 294
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF V++ LV+ Y C L +A +FD + +R++ W+ +I A+A G + A+ELY
Sbjct: 310 GFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELY 369
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN-KWETDVFVGAALIDMYAK 120
+R+L G +PD+ F L ACS +E ++ + + E + A ++D+ +
Sbjct: 370 HRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGR 429
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISA 150
+ +A + +++ P +T++SA
Sbjct: 430 AGKLRDAEDLL-RLMPFHPGPLLYMTMLSA 458
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/522 (38%), Positives = 309/522 (59%), Gaps = 34/522 (6%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
A ++FD +P+RN+ WN ++ E + L+ R+ E+G +PD F L+ C+
Sbjct: 136 TARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCA 195
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF------------- 131
L A+ GR++H V + +E ++ V ++L MY KC + ++
Sbjct: 196 GLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNT 255
Query: 132 -----------DKILER---------DPSEATLVTVISASADIAALPQGRELHGFSWRHR 171
+++L++ P + T V+VIS+ +++A L QG+++H +
Sbjct: 256 LIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAG 315
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
L V V ++L+ MY++CG ++ + +F + VV W++MI Y HG +A+DLF
Sbjct: 316 ASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFN 375
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+M+ E ++ + +TF+ +L ACS GL ++G FF+ MV Y + P ++HYTCMVDLLG
Sbjct: 376 QMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRY 435
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
G ++EA LI M VK D W LL++CK+H ++A E++ L+P D YV+LS
Sbjct: 436 GSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLS 495
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
NI+A W+ V+ +RK M DR +KK SW+EVKN+ H F GD SHP EI + L+
Sbjct: 496 NIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEIASYLR 555
Query: 411 WLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLK 470
L MK+ GYVP +SV HD++ ++K + HSE+LAIAF L+ TP GT + + KNL+
Sbjct: 556 ELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFALLYTPVGTPIRVIKNLR 615
Query: 471 ICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+C DCH+AIK+IS+I+ REI VRD +R+HHFK+G CSCGDYW
Sbjct: 616 VCSDCHVAIKYISEISNREIIVRDSSRFHHFKNGRCSCGDYW 657
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 148/324 (45%), Gaps = 26/324 (8%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF F+ V+ + L H+Y C L +L +P +N+ WN LI A NG E ++ Y
Sbjct: 214 GFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQY 273
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G PD TF + +CS L+ + +G++IH +VI+ V V ++LI MY++C
Sbjct: 274 NMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRC 333
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALP-QGRELHG---FSWRHRFELNVK 177
C+ + +VF + D V+ S+ IAA GR + F+ + +L
Sbjct: 334 GCLEYSLKVFLECENGD--------VVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEAN 385
Query: 178 VKTALVDMYA--KCGLVKVARNLFEQLREK-----RVVSWNAMITGYAMHGHSTKALDLF 230
T L +YA CGL + F+ + EK R+ + M+ +G +A L
Sbjct: 386 DVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALI 445
Query: 231 EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
M V+ D IT+ +LSAC + R E + R DP Y + ++
Sbjct: 446 RSMP--VKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPV--PYVLLSNIHASD 501
Query: 291 GRLDEACDLIMQMR---VKPDPGV 311
R D+ D+ MR +K +PG+
Sbjct: 502 KRWDDVSDVRKAMRDRKLKKEPGI 525
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 99/252 (39%), Gaps = 44/252 (17%)
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL 135
F L++C + +++ G+++H +I + +D F+ L+++Y+KC + A +F
Sbjct: 55 FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLF---- 110
Query: 136 ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
+P+ N+ L++ Y + G A
Sbjct: 111 -------------------GVMPRK--------------NIMSCNILINGYFRSGDWVTA 137
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRG 254
R +F+++ E+ V +WNAM+ G + + L LF +M + PD VL C+
Sbjct: 138 RKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGL 197
Query: 255 GLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--W 312
GR VR + ++ + + + G L E LI R P V W
Sbjct: 198 RALVAGRQ-VHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLI---RAMPSQNVVAW 253
Query: 313 GALLNSCKLHGH 324
L+ +G+
Sbjct: 254 NTLIAGRAQNGY 265
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 92 GRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVT-VISA 150
G+ + R + T+ G+ L + + +Q FD+ SE +L + ++ +
Sbjct: 2 GKYCLRPLTRRHFSTNPSSGSELTAEFTNLCSKGHLKQAFDRFSSHIWSEPSLFSHLLQS 61
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
+L G++LH + + L+++Y+KCG + A LF + K ++S
Sbjct: 62 CISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSC 121
Query: 211 NAMITGYAMHGHSTKALDLFEKMKD 235
N +I GY G A +F++M +
Sbjct: 122 NILINGYFRSGDWVTARKMFDEMPE 146
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/545 (38%), Positives = 312/545 (57%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + + LV +Y+ + A +FD++ R + W +I Y NG A+ ++
Sbjct: 130 GFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVF 189
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + + PD + A + + + +G+ IH V + E + + +L MYAK
Sbjct: 190 KEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKR 249
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
V AR F+++ + + T+ + +
Sbjct: 250 GLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAV 309
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
ASA + +L R L G+ + + + V T L+DMYAKCG + +AR +F+++ +K VV
Sbjct: 310 LASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVV 369
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
W+ MI GY +HGH +A+ L+ +MK V P+ TF+G+L+AC GL EG F M
Sbjct: 370 LWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM 429
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
D+ I+P QHY+C+VDLLG +G L++A D IM M +KP VWGALL++CK+H V+L
Sbjct: 430 -PDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRL 488
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E+A E+L L+P++ G+YV LSN+YA A W VA +R +M +G+ K + S IE+
Sbjct: 489 GEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEING 548
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
F GD SHP EI+ +L LE R+K AGYVP ESV HD+ ++E +C HSER
Sbjct: 549 NLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSER 608
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+A+G+I+T GT L ITKNL+ C +CH AIK ISK+ +REI +RD R+HHFKDG+CS
Sbjct: 609 LAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCS 668
Query: 508 CGDYW 512
CGD+W
Sbjct: 669 CGDFW 673
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 170/377 (45%), Gaps = 72/377 (19%)
Query: 22 CLH-----NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTF 76
CLH AH+ F + + ++ LWN +I+ Y + I +Y + + P+ FTF
Sbjct: 44 CLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTF 103
Query: 77 PFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILE 136
+ LKAC S G++IH + + ++VFV +L+ MYAK + AR VFDK+ +
Sbjct: 104 LYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHD 163
Query: 137 R----------------DPSEA-----------------TLVTVISASADIAALPQGREL 163
R DP EA LV+V++A ++ L QG+ +
Sbjct: 164 RTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSI 223
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
HG + E + +L MYAK GLV+VAR F ++ + ++ WNAMI+GYA +G+
Sbjct: 224 HGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYG 283
Query: 224 TKALDLFEKM-KDEVQPDHITF-VGVLSACSRG-------------------------GL 256
+A+ LF +M ++ D IT VL++ G GL
Sbjct: 284 EEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGL 343
Query: 257 FDE----GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDP 309
D G ++ V D D V ++ M+ G G EA L +M+ V P+
Sbjct: 344 IDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPND 403
Query: 310 GVWGALLNSCKLHGHVK 326
G + LL +CK G VK
Sbjct: 404 GTFIGLLTACKNSGLVK 420
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 116/254 (45%), Gaps = 34/254 (13%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G F P + L +Y+ + A F+R+ + NL LWN +I YA NG E AI+L
Sbjct: 230 LGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKL 289
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ + D+ T A+ A + + ++E R + + ++++ D FV LIDMYAK
Sbjct: 290 FREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAK 349
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + AR VFD++ ++D P++ T + +
Sbjct: 350 CGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGL 409
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
++A + + +G EL H E + + + +VD+ + G + A + + K
Sbjct: 410 LTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPG 469
Query: 208 VS-WNAMITGYAMH 220
VS W A+++ +H
Sbjct: 470 VSVWGALLSACKIH 483
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/554 (38%), Positives = 317/554 (57%), Gaps = 54/554 (9%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFL----WNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+V YS A +LF + + N+ L W +I Y+ G A+ ++ +++ G
Sbjct: 192 MVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSG 251
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWET----------DVFVGAALIDMY 118
+P+ T L AC++L A +G IH ++N T D+ V ALIDMY
Sbjct: 252 SLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 311
Query: 119 AKCSCVVNARQVFDKIL--ERD-----------------------------------PSE 141
+KC AR +FD I ER+ P+
Sbjct: 312 SKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNA 371
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRH-RFELNVK-VKTALVDMYAKCGLVKVARNLF 199
T+ ++ A A +AA+ G+++H + RH +++ + V L++MY+KCG V AR++F
Sbjct: 372 YTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVF 431
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFD 258
+ + +K +SW +M+TGY MHG ++ALD+F+KM K PD ITF+ VL ACS G+ D
Sbjct: 432 DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVD 491
Query: 259 EGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
+G +F+SM DY + P +HY +DLL GRLD+A + M ++P VW ALL++
Sbjct: 492 QGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSA 551
Query: 319 CKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
C++H +V+LAE AL KL+E+ + G+Y ++SNIYA A W+ VA++R LM GIKK
Sbjct: 552 CRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRP 611
Query: 379 ACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKA 438
CSW++ + +F GD SHP +IYA L+ L R+K GYVP T HDV+ +EK
Sbjct: 612 GCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKN 671
Query: 439 NMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRY 498
N++ HSE+LA+A+GL+ T G + ITKNL++C DCH A +ISKI + EI VRD +R+
Sbjct: 672 NLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRF 731
Query: 499 HHFKDGICSCGDYW 512
HHFK+G CSCG YW
Sbjct: 732 HHFKNGSCSCGGYW 745
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 119/248 (47%), Gaps = 43/248 (17%)
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
+L G D+FT P LKAC L + G H + N +E++VF+ AL+ MY++C
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 124 VVNARQVFDKILERDPSEA----------------------------------------- 142
+ A +FD+I +R +
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 143 -TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
++V ++ A + A+PQ +E+HG + R+ L+V V AL+D YAKCGL++ A +F
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEG 260
+ K VVSWNAM+ GY+ G+ A +LF+ M+ E P D +T+ V++ S+ G E
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240
Query: 261 RMFFESMV 268
F M+
Sbjct: 241 LNVFRQMI 248
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 130/273 (47%), Gaps = 51/273 (18%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQR---NLFLWNVLIRAYAWNGPYEVAI 58
GF + + LV +YS C L A +FD I QR ++ WN ++ A+ + A+
Sbjct: 40 GFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTAL 99
Query: 59 ELYYRL-LEIGLVPDN-----FTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGA 112
+L+ ++ L + P N + L AC +L A+ + + +H + IRN DVFVG
Sbjct: 100 DLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGN 159
Query: 113 ALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
ALID YAKC + NA +VF+ + +D SW
Sbjct: 160 ALIDAYAKCGLMENAVKVFNMMEFKDV--------------------------VSW---- 189
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV----VSWNAMITGYAMHGHSTKALD 228
A+V Y++ G K A LF+ +R++ + V+W A+I GY+ G S +AL+
Sbjct: 190 -------NAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALN 242
Query: 229 LFEKMK-DEVQPDHITFVGVLSACSRGGLFDEG 260
+F +M P+ +T + VLSAC+ G F +G
Sbjct: 243 VFRQMIFSGSLPNCVTIISVLSACASLGAFSQG 275
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A L+++YS C + A +FD + Q++ W ++ Y +G A++++ ++ + G
Sbjct: 410 VANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAG 469
Query: 69 LVPDNFTFPFALKACSALSAIEEG 92
VPD+ TF L ACS +++G
Sbjct: 470 FVPDDITFLVVLYACSHCGMVDQG 493
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/548 (38%), Positives = 314/548 (57%), Gaps = 39/548 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
F ++ + L+ YS D + +LF +P+ + +NV+I +YAWNG ++ + +L+
Sbjct: 271 NFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLF 330
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIE--EGRRIHEDVIRNKWETDVFVGAALIDMYA 119
+L D FPFA A S++ GR+IH I + V AL+DMYA
Sbjct: 331 RKLQFTRF--DRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYA 388
Query: 120 KCSCVVNARQVFDKILERDP---------------------------------SEATLVT 146
KC+ A+++FD I + +AT +
Sbjct: 389 KCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFAS 448
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ A A++A++ GR+LH R F NV +AL+D YAKCG + A F ++ E+
Sbjct: 449 ILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERN 508
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
VSWNA+I+ YA +G+ L+ F++M + +PD ++F+ VLSACS G +E F
Sbjct: 509 SVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFN 568
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
SM + Y + P +HYT MVD+L +GR DEA L+ +M +P +W ++LNSC++H +
Sbjct: 569 SMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNH 628
Query: 326 KLAELALEKLIELEP-HDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
+LA+ A ++L +E DA Y+ +SNIYA A W+ VAK++K M DRG++K A SW+E
Sbjct: 629 ELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVE 688
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
+K++ H F + D SHP +I K+ L M++ GY P T HDV+ K + H
Sbjct: 689 IKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYH 748
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SER AIAF L+NTPDG+ +++ KNL+ C DCH AIK IS+I EREI VRD +R+HHFKDG
Sbjct: 749 SERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDG 808
Query: 505 ICSCGDYW 512
+CSCGDYW
Sbjct: 809 VCSCGDYW 816
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 168/371 (45%), Gaps = 36/371 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G+ ++ ++ LV Y CL+ A QLF + ++ +N L+ Y+ G E AIEL
Sbjct: 169 LGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIEL 228
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ L G+ P +FTF L A L + G+++H V++ + +VFVG AL+D Y+K
Sbjct: 229 FLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSK 288
Query: 121 CSCVVNARQVFDKILERDPSEATLV---------------------------------TV 147
V ++F ++ E D +V T+
Sbjct: 289 HDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATL 348
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+S + L GR++H + +V+ ALVDMYAKC K A+ +F+ + K
Sbjct: 349 LSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKST 408
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFES 266
V W AMI+ Y G + +++F M+ P D TF +L AC+ GR
Sbjct: 409 VPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSL 468
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
++R + +V + ++D G + +A +M + + W AL+++ +G+V
Sbjct: 469 LIRSGFMS-NVYSGSALLDTYAKCGCMTDAIKSFGEMPER-NSVSWNALISAYAQNGNVD 526
Query: 327 LAELALEKLIE 337
+ +++I+
Sbjct: 527 GTLNSFQQMIQ 537
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 112/476 (23%), Positives = 189/476 (39%), Gaps = 90/476 (18%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L A +LFD + +R W +LI Y + + A LY + G+ PD T L
Sbjct: 90 LSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSG 149
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---- 138
L +IH VI+ +E ++ V +L+D Y K C+ A Q+F +L +D
Sbjct: 150 FGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTF 209
Query: 139 -----------------------------PSEATLVTVISASADIAALPQGRELHGFSWR 169
PS+ T ++SA+ + G+++HGF +
Sbjct: 210 NSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLK 269
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
F NV V AL+D Y+K V LF ++ E +S+N +IT YA +G ++ DL
Sbjct: 270 TNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDL 329
Query: 230 FEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMF----------FESMVRDYHID---- 274
F K++ F +LS + GR FES V + +D
Sbjct: 330 FRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAK 389
Query: 275 ----------------PSVQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWGAL 315
S +T M+ G+ +E ++ MR V D + ++
Sbjct: 390 CNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASI 449
Query: 316 LNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAK---LRKLMIDR 372
L +C LA ++L + + +G +SN+Y+ +A + AK + +
Sbjct: 450 LRAC-----ANLASISLGRQLHSLLIRSG---FMSNVYSGSALLDTYAKCGCMTDAIKSF 501
Query: 373 G-IKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTES 427
G + + + SW +A +S A + N D + +M ++GY P + S
Sbjct: 502 GEMPERNSVSW-------NALISAYAQNGNVDGTLNSFQ----QMIQSGYKPDSVS 546
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPD 240
++ + K G + AR LF+ + E+ VSW +I GY S +A L+ M + ++PD
Sbjct: 80 MISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPD 139
Query: 241 HITFVGVLSA 250
++T V +LS
Sbjct: 140 YVTLVTLLSG 149
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/554 (38%), Positives = 317/554 (57%), Gaps = 54/554 (9%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFL----WNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+V YS A +LF + + N+ L W +I Y+ G A+ ++ +++ G
Sbjct: 299 MVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSG 358
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWET----------DVFVGAALIDMY 118
+P+ T L AC++L A +G IH ++N T D+ V ALIDMY
Sbjct: 359 SLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMY 418
Query: 119 AKCSCVVNARQVFDKIL--ERD-----------------------------------PSE 141
+KC AR +FD I ER+ P+
Sbjct: 419 SKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNA 478
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRH-RFELNVK-VKTALVDMYAKCGLVKVARNLF 199
T+ ++ A A +AA+ G+++H + RH +++ + V L++MY+KCG V AR++F
Sbjct: 479 YTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVF 538
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFD 258
+ + +K +SW +M+TGY MHG ++ALD+F+KM K PD ITF+ VL ACS G+ D
Sbjct: 539 DSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVD 598
Query: 259 EGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
+G +F+SM DY + P +HY +DLL GRLD+A + M ++P VW ALL++
Sbjct: 599 QGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSA 658
Query: 319 CKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
C++H +V+LAE AL KL+E+ + G+Y ++SNIYA A W+ VA++R LM GIKK
Sbjct: 659 CRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRP 718
Query: 379 ACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKA 438
CSW++ + +F GD SHP +IYA L+ L R+K GYVP T HDV+ +EK
Sbjct: 719 GCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKN 778
Query: 439 NMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRY 498
N++ HSE+LA+A+GL+ T G + ITKNL++C DCH A +ISKI + EI VRD +R+
Sbjct: 779 NLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPSRF 838
Query: 499 HHFKDGICSCGDYW 512
HHFK+G CSCG YW
Sbjct: 839 HHFKNGSCSCGGYW 852
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 144/303 (47%), Gaps = 43/303 (14%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T +V Y AC A + +R+ WN+LIR + G + AI + R+L G
Sbjct: 53 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
D+FT P LKAC L + G H + N +E++VF+ AL+ MY++C + A
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 172
Query: 129 QVFDKILERDPSEA------------------------------------------TLVT 146
+FD+I +R + ++V
Sbjct: 173 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 232
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ A + A+PQ +E+HG + R+ L+V V AL+D YAKCGL++ A +F + K
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 292
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFE 265
VVSWNAM+ GY+ G+ A +LF+ M+ E P D +T+ V++ S+ G E F
Sbjct: 293 VVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFR 352
Query: 266 SMV 268
M+
Sbjct: 353 QMI 355
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 130/273 (47%), Gaps = 51/273 (18%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQR---NLFLWNVLIRAYAWNGPYEVAI 58
GF + + LV +YS C L A +FD I QR ++ WN ++ A+ + A+
Sbjct: 147 GFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTAL 206
Query: 59 ELYYRL-LEIGLVPDN-----FTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGA 112
+L+ ++ L + P N + L AC +L A+ + + +H + IRN DVFVG
Sbjct: 207 DLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGN 266
Query: 113 ALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
ALID YAKC + NA +VF+ + +D SW
Sbjct: 267 ALIDAYAKCGLMENAVKVFNMMEFKDV--------------------------VSW---- 296
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV----VSWNAMITGYAMHGHSTKALD 228
A+V Y++ G K A LF+ +R++ + V+W A+I GY+ G S +AL+
Sbjct: 297 -------NAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALN 349
Query: 229 LFEKMK-DEVQPDHITFVGVLSACSRGGLFDEG 260
+F +M P+ +T + VLSAC+ G F +G
Sbjct: 350 VFRQMIFSGSLPNCVTIISVLSACASLGAFSQG 382
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A L+++YS C + A +FD + Q++ W ++ Y +G A++++ ++ + G
Sbjct: 517 VANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAG 576
Query: 69 LVPDNFTFPFALKACSALSAIEEG 92
VPD+ TF L ACS +++G
Sbjct: 577 FVPDDITFLVVLYACSHCGMVDQG 600
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/538 (37%), Positives = 313/538 (58%), Gaps = 36/538 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL- 69
+++ Y + + +LF +P RN+ W +I +G E A+ L+ +++ G+
Sbjct: 123 NSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVE 182
Query: 70 -VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P + T+ + AC+ SA+ +G +IH V + + D ++ AALI YA C + ++
Sbjct: 183 VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSL 242
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+VF L + P++++ + +++ +
Sbjct: 243 RVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLE 302
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL GRE+H + + E +V V +L+ MY +CG + +F+++ +K +VSWN++I
Sbjct: 303 ALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIV 362
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G A HG AL F +M + V+PD ITF G+LSACS G+ +GR F+ + +
Sbjct: 363 GCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAE 422
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
+ HY CMVD+LG SG+L+EA +LI M VK + VW LL++C +H +++AE A +
Sbjct: 423 VKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKC 482
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
+I+LEPH + YV+LSN+YA A+ W V+++R+ M RGI K SWI +K + FLS
Sbjct: 483 IIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLS 542
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD SHP+ D IY KL+WL G++KE GYVP HDVE+++K M+ HSERLAI FGL
Sbjct: 543 GDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGL 602
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I+T +G+ + + KNL++C DCH AIK I+KI R+I VRD R+HHF DG CSCGDYW
Sbjct: 603 ISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 660
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 143/314 (45%), Gaps = 25/314 (7%)
Query: 20 CDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFA 79
C L A +LFD +P+R++ W +I + G EVA L+Y++ D +
Sbjct: 70 CADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMP----FRDIAAWNSM 125
Query: 80 LKACSALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYAKCSCVVNA-RQVFDKILER 137
+ +E+G R+ +++ RN +G +D + + + RQ+ +E
Sbjct: 126 IYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGG--LDQHGRSEEALGLFRQMMGCGVEV 183
Query: 138 DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
P+ +T VI+A A+ +AL QG ++H ++ + + + AL+ YA C ++ +
Sbjct: 184 KPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLR 243
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGL 256
+F VV W A++TGY ++ AL +F E M++ V P+ +F L++C
Sbjct: 244 VFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEA 303
Query: 257 FDEGRMFFESMVR-----DYHIDPS--VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
D GR + V+ D + S V +Y C G L++ +I + K +
Sbjct: 304 LDWGREIHTAAVKLGLETDVFVGNSLIVMYYRC--------GNLNDGV-VIFKRISKKNI 354
Query: 310 GVWGALLNSCKLHG 323
W +++ C HG
Sbjct: 355 VSWNSVIVGCAQHG 368
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/559 (38%), Positives = 317/559 (56%), Gaps = 49/559 (8%)
Query: 2 GFGFHPVLATKLVHLYSACDC-----LHNAHQLFDRIPQRNLFLW-NVLIRAYA------ 49
G HP T+L+ L + L A Q+FDRIP +W N L+R YA
Sbjct: 58 GLQAHPAFVTRLLTLCTDQGAAKPAQLSYARQVFDRIPGPGDVVWYNTLLRGYARCSAAG 117
Query: 50 -WNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDV 108
P E A ++ R+LE G+ PD +TF LKAC+A A EEGR+ H ++
Sbjct: 118 GARPPAEEAARVFVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVKVGAAEHE 177
Query: 109 FVGAALIDMYAKCSCVVNARQVFDKI----------------LERDPSEA---------- 142
+V LI+MYA+C AR +F ++ P EA
Sbjct: 178 YVLPTLINMYAECGDARAARTMFGRVDGECVVSYNAMITAAVRSSRPGEALVLFREMQAK 237
Query: 143 -------TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
TL++V+SA A + AL GR +H + + + + VKV TAL+DMY KCG ++ A
Sbjct: 238 GLKLTSVTLISVLSACALLGALELGRWIHEYVRKVQLDSLVKVNTALIDMYGKCGSLEDA 297
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRG 254
++F+ + + +W+ MI YA H + +A+ LFE+MK + ++PD +TF+GVL ACS
Sbjct: 298 ISVFQGMESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIKPDDVTFLGVLYACSHS 357
Query: 255 GLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGA 314
GL EG +F+SM R++ + P ++HY C+ DLL SG+LD A + I ++ +KP +W
Sbjct: 358 GLVSEGLQYFDSM-REFGLVPGIKHYGCVADLLARSGQLDRAYEFIDELPIKPTAILWRT 416
Query: 315 LLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
LL++C G L + E+++EL+ G+YVI SN+ A WE + ++RKLM ++G+
Sbjct: 417 LLSACGSRGDADLGKQVFERILELDDSHGGDYVIFSNLCANTGRWEEMNRVRKLMNEKGV 476
Query: 375 KKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFH-DVE 433
K CS IEV N+ H F +GD HP + + + ++K AGYVP T VFH ++
Sbjct: 477 VKVPGCSSIEVDNRVHEFFAGDGRHPKSLDARRMVDGVIEQLKLAGYVPNTSHVFHVEMG 536
Query: 434 NDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVR 493
+EKA + HSE+LAI+FGL+NT GT L + KNL++C DCH K +S + R I +R
Sbjct: 537 EEEKAVSLRYHSEKLAISFGLLNTSPGTTLRVVKNLRVCPDCHSMAKLVSMVFNRRIILR 596
Query: 494 DVNRYHHFKDGICSCGDYW 512
D+NR+HHF+DG+CSCGDYW
Sbjct: 597 DLNRFHHFEDGVCSCGDYW 615
>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Glycine max]
Length = 582
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/548 (38%), Positives = 324/548 (59%), Gaps = 37/548 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF P++ L++ YS + H++ +LFD P ++ W+ +I ++A N A+
Sbjct: 36 LGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWSSVISSFAQNDLPLPALRF 95
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+L GL+PD+ T P A K+ +ALS++ +H ++ DVFVG++L+D YAK
Sbjct: 96 FRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHDVFVGSSLVDTYAK 155
Query: 121 CSCVVNARQVFDKI-------------------------------LERD----PSEATLV 145
C V AR+VFD++ LE+D ++ TL
Sbjct: 156 CGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRALEQDYDIRVNDFTLS 215
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+V+ + G+++HG ++ F+ + V ++L+ +Y+KCG+V+ +FE+++ +
Sbjct: 216 SVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGGYKVFEEVKVR 275
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFF 264
+ WNAM+ A H H+ + +LFE+M+ V+P+ ITF+ +L ACS GL ++G F
Sbjct: 276 NLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYACSHAGLVEKGEHCF 335
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+++++ I+P QHY +VDLLG +G+L+EA +I +M ++P VWGALL C++HG+
Sbjct: 336 -GLMKEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVWGALLTGCRIHGN 394
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
+LA +K+ E+ +G V+LSN YA A WE A+ RK+M D+GIKK SW+E
Sbjct: 395 TELASFVADKVFEMGAVSSGIQVLLSNAYAAAGRWEEAARARKMMRDQGIKKETGLSWVE 454
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
N+ H F +GD SH EIY KL+ L M +AGYV T V +V+ DEK+ I H
Sbjct: 455 EGNRVHTFAAGDRSHGKTREIYEKLEELGEEMAKAGYVADTSFVLKEVDGDEKSQTIRYH 514
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SERLAIAFGLI P + + KNL++C DCH AIKFISK T R I VRD NR+H F+DG
Sbjct: 515 SERLAIAFGLITFPPEWPIRVMKNLRVCGDCHTAIKFISKCTGRVIIVRDNNRFHRFEDG 574
Query: 505 ICSCGDYW 512
C+CGDYW
Sbjct: 575 KCTCGDYW 582
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+L +G +LHG + FE V L++ Y+K L + LF+ K +W+++I+
Sbjct: 22 SLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWSSVIS 81
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITF 244
+A + AL F +M + + PD T
Sbjct: 82 SFAQNDLPLPALRFFRRMLRHGLLPDDHTL 111
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/546 (37%), Positives = 313/546 (57%), Gaps = 56/546 (10%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
LV Y + A ++FD++P+RN+ W +IR Y G E A L++R+ E +V
Sbjct: 31 LVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPERNVV-- 88
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
++ L ++E R++ D++ K DV +ID ++ AR++FD
Sbjct: 89 --SWTVMLGGLIEDGRVDEARQLF-DMMPVK---DVVASTNMIDGLCSEGRLIEAREIFD 142
Query: 133 KILERD----------------------------------------------PSEATLVT 146
++ +R+ PS ++++
Sbjct: 143 EMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVIS 202
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V+S +A+L GR++H R +F++++ V + L+ MY KCG + A+ +F++ K
Sbjct: 203 VLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKD 262
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+V WN++I GYA HG KAL++F M + PD ITF+GVLSACS G EG FE
Sbjct: 263 IVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFE 322
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
SM Y +DP +HY CMVDLLG +G+L+EA +LI M V+ D VWGALL +C+ H ++
Sbjct: 323 SMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNL 382
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
LAE+A +KL++LEP++AG Y++LSN+Y+ + W+ V +LRK M + ++KS CSWIEV
Sbjct: 383 DLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPGCSWIEV 442
Query: 386 KNKAHAFLSGDA-SHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
K H F G + SHP + I KL L ++EAGY P V HDV+ +EK + + H
Sbjct: 443 DKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGYCPDGSFVMHDVDEEEKVHSLRDH 502
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SE+LA+A+GL+ P+G + + KNL++C D H IK I+++T REI +RD NR+HHFKDG
Sbjct: 503 SEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKLIAQVTGREIILRDTNRFHHFKDG 562
Query: 505 ICSCGD 510
+CSC D
Sbjct: 563 LCSCSD 568
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F +++ L+ +Y C L A ++FDR +++ +WN +I YA +G E A+E+++
Sbjct: 228 FDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFH 287
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMYAK 120
+ + PD TF L ACS ++EG I E +++K++ D A ++D+ +
Sbjct: 288 DMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFES-MKSKYQVDPKTEHYACMVDLLGR 346
Query: 121 CSCVVNARQVFDKILERDPSEATLVT 146
+ A ++E P EA +
Sbjct: 347 AGKLNEAMN----LIENMPVEADAIV 368
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 23/180 (12%)
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
E N LV Y + G++ AR +F+++ E+ VVSW AMI GY G +A LF +
Sbjct: 22 ETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWR 81
Query: 233 MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM-VRDYHIDPSVQHYTCMVDLLGHSG 291
M + + +++ +L G DE R F+ M V+D V T M+D L G
Sbjct: 82 MPER---NVVSWTVMLGGLIEDGRVDEARQLFDMMPVKD------VVASTNMIDGLCSEG 132
Query: 292 RLDEACDLIMQMRVK------------PDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
RL EA ++ +M + D G W ++ + G +L LAL L++ E
Sbjct: 133 RLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKG-FELEALALFSLMQRE 191
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRG 254
AR LF+++ E +SWN +++GY +G ++A +F+KM + + +++ ++ +
Sbjct: 13 ARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPER---NVVSWTAMIRGYVQE 69
Query: 255 GLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK 306
GL +E + F M + +V +T M+ L GR+DEA L M VK
Sbjct: 70 GLIEEAELLFWRMP-----ERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVK 116
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/541 (36%), Positives = 317/541 (58%), Gaps = 35/541 (6%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P + L+ LY+ + +A ++F+ +P+ ++ W+ +I + NG A++L+ R+ E
Sbjct: 282 PRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMRE 341
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
+VP+ FT L C+ G ++H V++ ++ D++V ALID+YAKC +
Sbjct: 342 AFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDT 401
Query: 127 ARQVFDKILERDP---------------------------------SEATLVTVISASAD 153
A ++F ++ ++ +E T + + A A
Sbjct: 402 AVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACAS 461
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+A++ G ++HG + + V V +L+DMYAKCG +K A+++F ++ V SWNA+
Sbjct: 462 LASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNAL 521
Query: 214 ITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I+GY+ HG +AL + + MKD + +P+ +TF+GVLS CS GL D+G+ FESM+RD+
Sbjct: 522 ISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHG 581
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I+P ++HYTCMV LLG SG+LD+A LI + +P +W A+L++ + + A +
Sbjct: 582 IEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSA 641
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
E+++++ P D YV++SN+YA A W VA +RK M + G+KK SWIE + H F
Sbjct: 642 EEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYF 701
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
G + HP+ I L+WL + AGYVP +V D++++EK + HSERLA+A+
Sbjct: 702 SVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAY 761
Query: 453 GLINTPDG-TRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
GL+ P R+LI KNL+IC DCH A+K IS I +R++ +RD+NR+HHF G+CSCGD+
Sbjct: 762 GLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDH 821
Query: 512 W 512
W
Sbjct: 822 W 822
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 164/357 (45%), Gaps = 36/357 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G+ + + L++ YS C + +A +F+ I +++ +W ++ Y NG +E +++L
Sbjct: 175 LGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKL 234
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ G +P+N+TF ALKA L A + + +H +++ + D VG L+ +Y +
Sbjct: 235 LSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQ 294
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ +A +VF+++ + D P+E TL ++
Sbjct: 295 LGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSI 354
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
++ A G +LHG + F+L++ V AL+D+YAKC + A LF +L K
Sbjct: 355 LNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNE 414
Query: 208 VSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSWN +I GY G KA +F E ++++V +TF L AC+ D G
Sbjct: 415 VSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGL 474
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
++ + V ++D+ G + A + +M D W AL++ HG
Sbjct: 475 AIKTNNA-KKVAVSNSLIDMYAKCGDIKFAQSVFNEMET-IDVASWNALISGYSTHG 529
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 138/316 (43%), Gaps = 39/316 (12%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+A LFD +P+RN + L + YA P I LY RL G + F LK
Sbjct: 102 DALNLFDEMPERNNVSFVTLAQGYACQDP----IGLYSRLHREGHELNPHVFTSFLKLFV 157
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------ 138
+L E +H +++ ++++ FVGAALI+ Y+ C V +AR VF+ IL +D
Sbjct: 158 SLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAG 217
Query: 139 ---------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHR 171
P+ T T + AS + A + +HG +
Sbjct: 218 IVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTC 277
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
+ L+ +V L+ +Y + G + A +F ++ + VV W+ MI + +G +A+DLF
Sbjct: 278 YVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFI 337
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+M++ V P+ T +L+ C+ G G +V D + ++D+
Sbjct: 338 RMREAFVVPNEFTLSSILNGCAIGKCSGLGEQ-LHGLVVKVGFDLDIYVSNALIDVYAKC 396
Query: 291 GRLDEACDLIMQMRVK 306
++D A L ++ K
Sbjct: 397 EKMDTAVKLFAELSSK 412
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 142/359 (39%), Gaps = 66/359 (18%)
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
D+ + L+ C + + IH D+++ D+F L++ Y K +A +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 132 DKILERDPSEATLVTVISASADIAAL-----PQGREL--HGFS----------------W 168
D++ ER+ + A D L +G EL H F+ W
Sbjct: 108 DEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPW 167
Query: 169 RHR------FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
H ++ N V AL++ Y+ CG V AR +FE + K +V W +++ Y +G+
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 223 STKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD-YHIDPSV--- 277
+L L M+ P++ TF L A G FD + +++ Y +DP V
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 278 --QHYTCMVDL------------------------LGHSGRLDEACDLIMQMR---VKPD 308
Q YT + D+ +G +EA DL ++MR V P+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 309 PGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYV--ILSNIYARAANWEGVAKL 365
++LN C + L E L L+ D YV L ++YA+ + KL
Sbjct: 348 EFTLSSILNGCAIGKCSGLGE-QLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKL 405
>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
Length = 719
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/554 (39%), Positives = 312/554 (56%), Gaps = 47/554 (8%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIP-QRNLFLWNVLIRAYAWNGPYEVAIELY 61
F + + T LV +Y+ C C+ A LF+ P +RN LW ++ Y+ NG AIE +
Sbjct: 169 FDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECF 228
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ + FTFP L AC ++SA G ++H ++R+ + +VFVG+AL+DMY+KC
Sbjct: 229 RDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKC 288
Query: 122 SCVVNARQVFDKILERDPSE--ATLVTVISASADIAALPQGRELHGFSWRH----RFELN 175
+ NAR++ + + DP + +V + AL R +H RH F
Sbjct: 289 GDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMH---LRHMKIDEFTYP 345
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK- 234
V ALVDMYAK G A ++FE++ +K V+SW +++TG +G +AL LF +M+
Sbjct: 346 SLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRI 405
Query: 235 DEVQPDHITFVGVLSACSRG---------------GLFDE-------------------- 259
+ PD I VLSA +FD
Sbjct: 406 MGIHPDQIVIAAVLSALDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNG 465
Query: 260 -GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
GR +F+SM Y I P +HY CM+DLLG SG+L EA +L+ QM V+PD VW ALL +
Sbjct: 466 RGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAA 525
Query: 319 CKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
C++HG+V+L E A L ELEP +A YV+LSN+Y+ A WE AK R+LM RG+ K
Sbjct: 526 CRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEP 585
Query: 379 ACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKA 438
CSWIE+ +K H F+S D SHP EIY+K+ + +KEAGYVP HD++ + K
Sbjct: 586 GCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKE 645
Query: 439 NMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRY 498
+ HSE+LA+AFGL+ P G + I KNL+IC DCH A+K++S + R + +RD N +
Sbjct: 646 LGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILRDSNCF 705
Query: 499 HHFKDGICSCGDYW 512
HHF++G CSC DYW
Sbjct: 706 HHFREGACSCSDYW 719
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 164/349 (46%), Gaps = 48/349 (13%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
++ Y+ L+ A +LF P R+ W+ LI Y G A+EL++ + G P+
Sbjct: 78 MIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPN 137
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
FT+ L+ CS +E+G++IH I+ +++++ FV L+DMYAKC C++ A +F+
Sbjct: 138 QFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFE 197
Query: 133 -------------------------KILE--RDP-------SEATLVTVISASADIAALP 158
K +E RD ++ T ++++A I+A
Sbjct: 198 LAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACG 257
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
G ++HG R F NV V +ALVDMY+KCG + AR + E + VSWN+MI G
Sbjct: 258 FGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCV 317
Query: 219 MHGHSTKALDLFEKMK------DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
G +AL LF M DE + ++ ++ G FD FE M
Sbjct: 318 RQGLGEEALSLFRIMHLRHMKIDEFTYPSLVNNALVDMYAKRGYFDYAFDVFEKMT---- 373
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWGALLNS 318
D V +T +V H+G +EA L +MR + PD V A+L++
Sbjct: 374 -DKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSA 421
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 145/320 (45%), Gaps = 50/320 (15%)
Query: 18 SACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFP 77
S C + +A +LFD +P R+ WN +I AYA +G A +L+Y
Sbjct: 52 SKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYET------------- 98
Query: 78 FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL-- 135
+++C S+ LI Y + C V A ++F ++
Sbjct: 99 -PIRSCITWSS-------------------------LISGYCRYGCDVEALELFWEMQYE 132
Query: 136 -ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV 194
ER P++ T +V+ + L +G+++H + + +F+ N V T LVDMYAKC +
Sbjct: 133 GER-PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILE 191
Query: 195 ARNLFEQLREKRV-VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACS 252
A LFE +KR V W AM+TGY+ +G KA++ F M+ E ++ + TF +L+AC
Sbjct: 192 AEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACG 251
Query: 253 RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
G +VR +V + +VD+ G L A ++ M V DP W
Sbjct: 252 SISACGFGAQVHGCIVRS-GFGANVFVGSALVDMYSKCGDLSNARRMLETMEVD-DPVSW 309
Query: 313 GALLNSCKLHGHVKLAELAL 332
+++ C G L E AL
Sbjct: 310 NSMIVGCVRQG---LGEEAL 326
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/509 (40%), Positives = 311/509 (61%), Gaps = 37/509 (7%)
Query: 26 AHQLFDRIPQR-NLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV-PDNFTFPFALKAC 83
AH++F +I + N+F+WN LIR YA G A LY + GLV PD T+PF +KA
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----- 138
+ ++ + G IH VIR+ + + ++V +L+ +YA C V +A +VFDK+ E+D
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 139 -----------PSEA-----------------TLVTVISASADIAALPQGRELHGFSWRH 170
P EA T+V+++SA A I AL G+ +H + +
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
N+ L+D+YA+CG V+ A+ LF+++ +K VSW ++I G A++G +A++LF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 231 EKMK--DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
+ M+ + + P ITFVG+L ACS G+ EG +F M +Y I+P ++H+ CMVDLL
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
+G++ +A + I M ++P+ +W LL +C +HG LAE A ++++LEP+ +G+YV+
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 431
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAK 408
LSN+YA W V K+RK M+ G+KK S +EV N+ H FL GD SHP D IYAK
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 491
Query: 409 LKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKN 468
LK + GR++ GYVP +V+ DVE +EK N + HSE++AIAF LI+TP+ + + + KN
Sbjct: 492 LKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKN 551
Query: 469 LKICDDCHIAIKFISKITEREITVRDVNR 497
L++C DCH+AIK +SK+ REI VRD +R
Sbjct: 552 LRVCADCHLAIKLVSKVYNREIVVRDRSR 580
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 137/266 (51%), Gaps = 16/266 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + L+HLY+ C + +A+++FD++P+++L WN +I +A NG E A+ LY
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ PD FT L AC+ + A+ G+R+H +I+ ++ L+D+YA+C
Sbjct: 211 TEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC 270
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRE-LHGFSWRHRFELNVKVKT 180
V A+ +FD++++++ T + V +A G+E + F + E + +
Sbjct: 271 GRVEEAKTLFDEMVDKNSVSWTSLIV-----GLAVNGFGKEAIELFKYMESTEGLLPCEI 325
Query: 181 ALVD-MYA--KCGLVKVARNLFEQLREK-----RVVSWNAMITGYAMHGHSTKALDLFEK 232
V +YA CG+VK F ++RE+ R+ + M+ A G KA + +
Sbjct: 326 TFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKS 385
Query: 233 MKDEVQPDHITFVGVLSACSRGGLFD 258
M +QP+ + + +L AC+ G D
Sbjct: 386 M--PMQPNVVIWRTLLGACTVHGDSD 409
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 113/274 (41%), Gaps = 48/274 (17%)
Query: 154 IAALPQGRELHGFSWRHRF-----ELNVKVKTALVDMYAKCGLVKVARNLFEQLREK-RV 207
++++ + R++H FS RH EL + LV + + + A +F ++ + V
Sbjct: 27 VSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPM-SYAHKVFSKIEKPINV 85
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
WN +I GYA G+S A L+ +M+ V+PD T+ ++ A + G
Sbjct: 86 FIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHS 145
Query: 266 SMVRD-----YHIDPSVQH-------------------------YTCMVDLLGHSGRLDE 295
++R ++ S+ H + +++ +G+ +E
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 205
Query: 296 ACDLIMQMR---VKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE-PHDAGNYVILSN 351
A L +M +KPD +LL++C G + L + +I++ + + +L +
Sbjct: 206 ALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLD 265
Query: 352 IYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+YAR E L M+D+ + SW +
Sbjct: 266 LYARCGRVEEAKTLFDEMVDKN-----SVSWTSL 294
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/516 (39%), Positives = 301/516 (58%), Gaps = 10/516 (1%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + LV +Y C L A + D + +R++ WN L+ YA N ++ A+E+
Sbjct: 170 VGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEV 229
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + + D T L A S + E +D+ + + +I +Y K
Sbjct: 230 CREMESVKISHDAGTMASLLPAVS--NTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMK 287
Query: 121 CSCVVNARQVFDKILERD---PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
+ V A +++ +E D P ++ +V+ A D +AL G+++HG+ R + N+
Sbjct: 288 NAMPVEAVELYSG-MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 346
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE- 236
++ AL+DMYAKCG + AR++FE ++ + VVSW AMI+ Y G A+ LF KM+D
Sbjct: 347 LENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSG 406
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+ PD I FV L+ACS GL +EGR F+ M Y I P ++H CMVDLLG +G++ EA
Sbjct: 407 LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 466
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARA 356
I +M ++P+ VWGALL +C++H + + LA +KL +L P +G YV+LSNIYA+A
Sbjct: 467 YKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKA 526
Query: 357 ANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRM 416
WE V +R +M +G+KK+ S +EV H FL GD SHP EIY +L L +M
Sbjct: 527 GRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKM 586
Query: 417 KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPD---GTRLLITKNLKICD 473
KE GYVP +ES HDVE ++K + HSE+LAI F L+NT + + ITKNL+IC
Sbjct: 587 KELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTEEEDSNNAIRITKNLRICG 646
Query: 474 DCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
DCH+A K IS+IT REI +RD NR+H F+ G+CSC
Sbjct: 647 DCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 682
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 159/330 (48%), Gaps = 23/330 (6%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
++ L KL+ Y++ + A ++FD IP+RN+ + NV+IR+Y NG Y I+++ +
Sbjct: 73 YNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTM 132
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
+ PD++TFP LKACS I G++IH + + +FVG L+ MY KC +
Sbjct: 133 CSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFL 192
Query: 125 VNARQVFDKILERDPSEATLVTVISASADIAALPQG----------RELHGFSWRHRFEL 174
AR V D++ RD V+S ++ +A Q RE+ H
Sbjct: 193 SEARLVLDEMSRRD--------VVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGT 244
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
+ A+ + + V +++F ++ +K +VSWN MI Y + +A++L+ M+
Sbjct: 245 MASLLPAVSNTTTEN--VMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGME 302
Query: 235 -DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
D +PD ++ VL AC G+ + R I P++ ++D+ G L
Sbjct: 303 ADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLI-PNLLLENALIDMYAKCGCL 361
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
D A D+ M+ + D W A++++ G
Sbjct: 362 DRARDVFENMKSR-DVVSWTAMISAYGFSG 390
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 102/244 (41%), Gaps = 16/244 (6%)
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
L V+ D+ L R +H N + L+ YA V AR +F+++
Sbjct: 46 LGQVLDTYPDLKTL---RTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIP 102
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRM 262
E+ V+ N MI Y +G + + +F M V+PDH TF VL ACS G G+
Sbjct: 103 ERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKK 162
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
S + + ++ +V + G G L EA L++ + D W +L+ +
Sbjct: 163 IHGSATK-VGLSSTLFVGNGLVSMYGKCGFLSEA-RLVLDEMSRRDVVSWNSLVAG---Y 217
Query: 323 GHVKLAELALEKLIELE----PHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
+ + ALE E+E HDAG L + E V ++ + G KKS+
Sbjct: 218 AQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTT-ENVMYVKDMFFKMG-KKSL 275
Query: 379 ACSW 382
SW
Sbjct: 276 -VSW 278
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/505 (39%), Positives = 291/505 (57%), Gaps = 36/505 (7%)
Query: 44 LIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK 103
+IR +G + Y +L ++P +F L++C+ + G H +++
Sbjct: 1 MIRVSLESGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMG 60
Query: 104 WETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------------------------- 138
+E D+ + L+D YAK V AR +FD + ER+
Sbjct: 61 FEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISM 120
Query: 139 ----------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
P+E T+V+++SA A + AL G +HG+ R +++V + AL+DMY K
Sbjct: 121 FQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCK 180
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGV 247
CG ++ A ++F L K + WN++I G M+G +A+ F M+ E ++PD +TFVG+
Sbjct: 181 CGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGI 240
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
LS CS GL G+ +F M+ Y ++P V+HY CMVDLLG +G L EA +LI M +KP
Sbjct: 241 LSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKP 300
Query: 308 DPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRK 367
+ V G+LL +C++H KL E ++L+EL+P D GNYV LSN+YA + W+ V RK
Sbjct: 301 NSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRK 360
Query: 368 LMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTES 427
LMI RG+ K+ CS IEV N H F++GD SHP +I A L + +K G+VP T +
Sbjct: 361 LMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTAN 420
Query: 428 VFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITE 487
V HD+E +EK I HSER+A+AFGL++TP G + + KNL+ C DCH A+K IS +
Sbjct: 421 VLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFK 480
Query: 488 REITVRDVNRYHHFKDGICSCGDYW 512
REI VRD R+HHF++G CSC DYW
Sbjct: 481 REIIVRDRKRFHHFRNGSCSCNDYW 505
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 17/261 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQR--NLFLWNVLIRAYAWNGPYEVAI 58
MGF + +L T L+ Y+ + A LFD + +R N WN +I AY G + AI
Sbjct: 59 MGFEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAI 118
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
++ ++ + P T L AC+ L A++ G IH + + + DV +G ALIDMY
Sbjct: 119 SMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMY 178
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
KC + A VF + S + S + +G E E
Sbjct: 179 CKCGALEAAIDVFHGL-----SRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPD 233
Query: 179 KTALVDMYAKC---GLVKVARNLFEQL-----REKRVVSWNAMITGYAMHGHSTKALDLF 230
V + + C GL+ + F ++ E V + M+ G+ +AL+L
Sbjct: 234 GVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELI 293
Query: 231 EKMKDEVQPDHITFVGVLSAC 251
M ++P+ + +L AC
Sbjct: 294 RAMP--MKPNSMVLGSLLRAC 312
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/524 (40%), Positives = 299/524 (57%), Gaps = 36/524 (6%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+A +LFD IP+RNL WN I +G + AIE + IG P++ TF L ACS
Sbjct: 161 DARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACS 220
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER------- 137
++ G ++H V R+ ++TDV V LID Y KC + ++ +F ++ +
Sbjct: 221 DGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCS 280
Query: 138 --------------------------DPSEATLVTVISASADIAALPQGRELHGFSWRHR 171
+ S+ + +V+SA A +A L GR +H + +
Sbjct: 281 LVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKAC 340
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
E N+ V +ALVDMY KCG ++ + F+++ EK +V+ N++I GYA G AL LFE
Sbjct: 341 VERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFE 400
Query: 232 KMKDE---VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
M P+++TFV +LSACSR G + G F+SM Y I+P +HY+C+VD+LG
Sbjct: 401 DMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLG 460
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
+G +++A + I +M +KP VWGAL N+C++HG L LA E L +L+P D+GN+V+
Sbjct: 461 RAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVL 520
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAK 408
LSN +A A W +R+ M GIKK SWI VKN+ HAF + D SH EI
Sbjct: 521 LSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTM 580
Query: 409 LKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKN 468
L L +M+ AGY P + +D+E +EKA + HSE+LA+AFGL+ P + ITKN
Sbjct: 581 LTKLRNKMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLVALPLSVPIRITKN 640
Query: 469 LKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+IC DCH KF+S +REI VRD NR+H FKDGICSC DYW
Sbjct: 641 LRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 170/382 (44%), Gaps = 36/382 (9%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P LA L+++YS D +A + P RN+ W L+ A NG + A+ ++ +
Sbjct: 42 PFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRR 101
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
G+ P++FTFP KA ++L G++IH ++ DVFVG + DMY K +
Sbjct: 102 EGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 161
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISASAD 153
AR++FD+I ER+ P+ T ++A +D
Sbjct: 162 ARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSD 221
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
L G ++HG +R F+ +V V L+D Y KC ++ + +F ++ K VSW ++
Sbjct: 222 GLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSL 281
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
+ Y + KA L+ + + E V+ VLSAC+ + GR V+
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKAC- 340
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
++ ++ + +VD+ G G ++++ +M K + +L+ G V +A
Sbjct: 341 VERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEK-NLVTLNSLIGGYAHQGQVDMALALF 399
Query: 333 EKLIELEPHDAGNYVILSNIYA 354
E + A NY+ ++ +
Sbjct: 400 EDMAPRGCGPAPNYMTFVSLLS 421
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 18/240 (7%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE-- 66
+ + LV +Y C C+ ++ Q FD +P++NL N LI YA G ++A+ L+ +
Sbjct: 347 VGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRG 406
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYAKCSCV 124
G P+ TF L ACS A+E G +I D +++ + E + ++DM + V
Sbjct: 407 CGPAPNYMTFVSLLSACSRAGAVENGMKIF-DSMKSTYGIEPGAEHYSCIVDMLGRAGMV 465
Query: 125 VNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK---TA 181
A + K+ P + T ++V A + + L + + F+L+ K
Sbjct: 466 EQAFEFIKKM----PIKPT-ISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVL 520
Query: 182 LVDMYAKCGLVKVARNLFEQLRE---KRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ 238
L + +A G A + E+++ K+ ++ + +H K D KM E+Q
Sbjct: 521 LSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQAK--DRSHKMNKEIQ 578
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/534 (37%), Positives = 311/534 (58%), Gaps = 34/534 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L++ Y L +A +LFD + +RN+ WN +I + A+ L+ + +G +PD
Sbjct: 134 LINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPD 193
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
FT L+ C+ L ++ G+ +H +++ +E VG++L MY K + + ++
Sbjct: 194 EFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIK 253
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
+ R P + T V+V+SA +++A L Q
Sbjct: 254 SMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQ 313
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G+++H + + V ++L+ MY++ G ++ + F VV W++MI Y
Sbjct: 314 GQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGF 373
Query: 220 HGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
HG +AL+LF +M+D +++ + +TF+ +L ACS GL ++G +F+ MV+ Y + P ++
Sbjct: 374 HGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIE 433
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
HYTC+VDLLG +GRL+EA +I M V+PD +W LL +CKLH ++AE E++I+L
Sbjct: 434 HYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIKL 493
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDAS 398
+P DA +YV+LSNI+A A NW V+++RK M DR ++K SW+E+KN H F GD S
Sbjct: 494 DPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQFSMGDKS 553
Query: 399 HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTP 458
HP EI LK L +K+ GYVP SV HD++N+EK + HSE+ AIAF L+NT
Sbjct: 554 HPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNTS 613
Query: 459 DGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ + + KNL++CDDCH AIK IS+I REI VRD +R+HHFKDG CSCG+YW
Sbjct: 614 ENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGNYW 667
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 151/349 (43%), Gaps = 45/349 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++ L++ YS ++ LF +P+RN+ +N+LI Y G E A +L+ + E
Sbjct: 99 ISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERN 158
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ N + L+ E NK +F +MY
Sbjct: 159 IATWN-------AMIAGLTQFE----------FNKQALSLFK-----EMYG--------- 187
Query: 129 QVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
L P E TL +V+ A + +L G+E+H + FEL+ V ++L MY K
Sbjct: 188 ------LGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIK 241
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGV 247
G + L + + + VV+WN +I G A +G + L+ + MK +PD ITFV V
Sbjct: 242 SGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSV 301
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
LSACS +G+ +++ + + ++ + SG L+++ + R
Sbjct: 302 LSACSELATLGQGQQIHAEVIKA-GASSVLAVVSSLISMYSRSGCLEDSIKAFVD-RENF 359
Query: 308 DPGVWGALLNSCKLHGHVKLAELALEKLIELE--PHDAGNYVILSNIYA 354
D +W +++ + HG E ALE ++E +A LS +YA
Sbjct: 360 DVVLWSSMIAAYGFHGR---GEEALELFHQMEDLKMEANEVTFLSLLYA 405
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/538 (39%), Positives = 307/538 (57%), Gaps = 35/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L +++ ++ C + +A +LFD +P++N+ WN +I G Y A L+ + +
Sbjct: 168 LRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDF 227
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ F ++A + L I GR++H ++ DVFV ALIDMY+KC + +A+
Sbjct: 228 SDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQ 287
Query: 129 QVFDKILERD----------------PSEA-----------------TLVTVISASADIA 155
VFD++ E+ EA T +I A +A
Sbjct: 288 CVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLA 347
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+L ++ H RH F L++ TALVD+Y+K G ++ A+++F+ + K V+SWNA+I
Sbjct: 348 SLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIA 407
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GY HG +A+++FE+M E + P+H+TF+ VLSACS GL D G FESM RD+ I
Sbjct: 408 GYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIK 467
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P HY CM++LLG G LDEA LI KP +W ALL +C++H + +L + A EK
Sbjct: 468 PRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEK 527
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L + P NYV+L NIY R+ E A + + + RG++ ACSWIE+K + + F+S
Sbjct: 528 LYGMGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFIS 587
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD H EIY KL L + + GYVP + + DV+ E+ ++ HSE+LAIAFGL
Sbjct: 588 GDKCHAQSKEIYQKLDELMLEISKHGYVPQDKFLLPDVDEQEE-RVLLYHSEKLAIAFGL 646
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
INT D T L I ++ +IC DCH AIK I+ +T REI VRD +R+HHFKDG CSCGDYW
Sbjct: 647 INTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 157/321 (48%), Gaps = 43/321 (13%)
Query: 54 YEVAIELYYRLLEIGLV--PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG 111
Y A+EL+ +LE+ D+ T+ + AC L +I +++ +I + + D ++
Sbjct: 111 YHEALELF-EILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLR 169
Query: 112 AALIDMYAKCSCVVNARQVFDKILER---------------------------------D 138
++ M+ KC +++AR++FD++ E+ D
Sbjct: 170 NRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSD 229
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
VT+I ASA + + GR+LH S + +V V AL+DMY+KCG ++ A+ +
Sbjct: 230 AGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCV 289
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLF 257
F+Q+ EK V WN++I GYA+HG+S +AL ++ +M+D V+ D+ TF ++ C+R
Sbjct: 290 FDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASL 349
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGAL 315
+ + +VR + + T +VDL GR+++A + M P V W AL
Sbjct: 350 EHAKQAHAGLVR-HGFGLDIVANTALVDLYSKWGRIEDAKHVFDMM---PHKNVISWNAL 405
Query: 316 LNSCKLHGHVKLAELALEKLI 336
+ HG A E+++
Sbjct: 406 IAGYGNHGRGVEAVEMFERML 426
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 115/269 (42%), Gaps = 19/269 (7%)
Query: 138 DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
D T ++SA + ++ +++ + + + ++ ++ M+ KCG++ AR
Sbjct: 128 DMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARR 187
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGL 256
LF+++ EK ++SWN +I G G +A LF M +D FV ++ A + GL
Sbjct: 188 LFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGL 247
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
GR ++ + V ++D+ G +++A + QM K G W +++
Sbjct: 248 IFAGRQLHSCSLKT-GVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVG-WNSII 305
Query: 317 NSCKLHGHVKLAELALEKLIELEPH----DAGNYVILSNIYARAANWEGVAKLRKLMIDR 372
LHG+ +E AL E+ D + I+ I AR A+ E + ++
Sbjct: 306 AGYALHGY---SEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRH 362
Query: 373 GIKKSIACS---------WIEVKNKAHAF 392
G I + W +++ H F
Sbjct: 363 GFGLDIVANTALVDLYSKWGRIEDAKHVF 391
>gi|225424875|ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Vitis vinifera]
Length = 607
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/553 (39%), Positives = 329/553 (59%), Gaps = 48/553 (8%)
Query: 6 HP---VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV-AIELY 61
HP L ++++H S D L A ++F +I N F+WN LIRA A + + AI LY
Sbjct: 57 HPNTFFLYSRILHFSSLHD-LRYAFRVFHQIENPNSFMWNALIRACARSTDRKQHAIALY 115
Query: 62 YRLLEIG-LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+R+LE G ++ D TFPF LKAC+ L A+ EG +IH +++ +++DV++ +L+ YA
Sbjct: 116 HRMLEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHAQILKLGFDSDVYINNSLVHFYAT 175
Query: 121 CSCVVNARQVFDKILER--------------------------------DPSEATLVTVI 148
C + A+ VFD++ ER +P T+ ++
Sbjct: 176 CDRLDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQKFFEPDGYTIQSIA 235
Query: 149 SASADIAALPQGRELHGFSWRHRFELN----VKVKTALVDMYAKCGLVKVARNLFEQLRE 204
+A A + +L G H F + +F+ + V + T+LVDMY KCG +++A LF ++ +
Sbjct: 236 NACAGMGSLSLGMWAHVFLLK-KFDADRVNDVLLNTSLVDMYCKCGSLELALQLFHRMPK 294
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRM 262
+ V SWN+MI G++ HG AL+ F M +++ P+ ITFVGVLSAC+ GGL EGR
Sbjct: 295 RDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSACNHGGLVSEGRR 354
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS-CKL 321
+F+ MV +Y I P ++HY C+VDLL +G +DEA D++ M ++PD +W +LL++ CK
Sbjct: 355 YFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVVSNMPMRPDLVIWRSLLDACCKQ 414
Query: 322 HGHVKLAELALEKLIELEPHD-AGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIAC 380
+ V+L+E +++E E +G YV+LS +YA A+ W V +RKLM D+G+ K C
Sbjct: 415 NAGVELSEEMARRVLEAEGGVCSGVYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEPGC 474
Query: 381 SWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVP-GTESVFHDVENDEKAN 439
S IE+ AH F +GD SHP +EIY+ L +E R++ GY P +++ D D K
Sbjct: 475 SSIEIDGVAHEFFAGDTSHPQTEEIYSALDVIEERVERVGYSPDSSQAPMVDETIDGKQY 534
Query: 440 MICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYH 499
+ HSERLAIAFGL+ T G + I KNL++C++CH K IS++ REI VRD R+H
Sbjct: 535 SLRLHSERLAIAFGLLKTKPGMPIRIFKNLRVCNNCHQVTKLISRVFNREIIVRDRIRFH 594
Query: 500 HFKDGICSCGDYW 512
HFKDG CSC DYW
Sbjct: 595 HFKDGACSCMDYW 607
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/620 (35%), Positives = 327/620 (52%), Gaps = 114/620 (18%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQR------------------------- 36
GF ++A+ L H+Y CD + +A +LFDR+P R
Sbjct: 134 GFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELF 193
Query: 37 ----------NLFLWNVLIRAYAWNGPYEVAIELYYRLL--------------------- 65
NL WN ++ + NG Y+ A+ ++ +L
Sbjct: 194 GEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCL 253
Query: 66 --------------EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDV------------ 99
+ GL D F L ++E R+ ++V
Sbjct: 254 EDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFL 313
Query: 100 ---IRN----------------KWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD-- 138
RN K E +V ++I SC N + + L RD
Sbjct: 314 TGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSII-----ASCSQNGKDLEALELFRDMQ 368
Query: 139 -----PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVK 193
P+ T+ ++I A +I+AL G+E+H FS R +V V +AL+DMYAKCG ++
Sbjct: 369 AYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQ 428
Query: 194 VARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACS 252
+AR F+++ +VSWNA++ GYAMHG + + +++F M Q PD +TF VLSAC+
Sbjct: 429 LARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACA 488
Query: 253 RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
+ GL +EG + SM ++ I+P ++HY C+V LL G+L+EA +I +M +PD VW
Sbjct: 489 QNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVW 548
Query: 313 GALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDR 372
GALL+SC++H ++ L E+A EKL LEP + GNY++LSNIYA W+ ++R++M +
Sbjct: 549 GALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSK 608
Query: 373 GIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDV 432
G++K+ SWIEV +K H L+GD SHP +I KL L +MK++GY+P T V DV
Sbjct: 609 GLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFVLQDV 668
Query: 433 ENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITV 492
E +K ++C HSE+LA+ GL+NT G L + KNL+ICDDCH IK IS++ REI V
Sbjct: 669 EEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIYV 728
Query: 493 RDVNRYHHFKDGICSCGDYW 512
RD NR+HHFKDG+CSCGD+W
Sbjct: 729 RDTNRFHHFKDGVCSCGDFW 748
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 45/250 (18%)
Query: 9 LATKLVHLYSACDCLHNAH---QLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
L T L+ Y+ L L +P LF ++ LI A+A + + + + L
Sbjct: 37 LTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLH 96
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
+ L+PD F P A+K+C++L A++ G+++H + + TD V ++L MY KC ++
Sbjct: 97 PLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRIL 156
Query: 126 NARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
+AR++FD++ +RD V V +A++
Sbjct: 157 DARKLFDRMPDRD-------------------------------------VVVWSAMIAG 179
Query: 186 YAKCGLVKVARNLFEQLR----EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPD 240
Y++ GLV+ A+ LF ++R E +VSWN M+ G+ +G +A+ +F M + PD
Sbjct: 180 YSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPD 239
Query: 241 HITFVGVLSA 250
T VL A
Sbjct: 240 GSTVSCVLPA 249
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/533 (36%), Positives = 303/533 (56%), Gaps = 33/533 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
LA L+ +YS C H+ +Q+F + Q+N+ W +I +Y G ++ L ++ G
Sbjct: 548 LANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDG 607
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD F L + ++++G+ +H IRN E + V AL++MY C + AR
Sbjct: 608 IKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEAR 667
Query: 129 QVFDKILERD--------------------------------PSEATLVTVISASADIAA 156
VFD + +D P+ T+ ++ A A I++
Sbjct: 668 LVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQFKPNTVTMTCILPAVASISS 727
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
L +GRE+H ++ R F + ALVDMY KCG + VAR LF++L +K ++SW MI G
Sbjct: 728 LERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAG 787
Query: 217 YAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
Y MHG A+ LFE+M+ V+PD +F +L AC GL EG FF +M ++Y I+P
Sbjct: 788 YGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEP 847
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
++HYTC+VDLL H+G L EA + I M ++PD +W +LL+ C++H VKLAE +++
Sbjct: 848 KLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRV 907
Query: 336 IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG 395
+LEP + G YV+L+NIYA A WE V KL+ + RG++++ CSWIEV+ K H F++
Sbjct: 908 FKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFIAD 967
Query: 396 DASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLI 455
+ +HP + I L + RM+E G+ P + + +C HS +LA+ FG++
Sbjct: 968 NRNHPEWNRIAEFLDHVARRMREEGHDPKKKYSLMGANDAVHDEALCGHSSKLAVTFGVL 1027
Query: 456 NTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
+ P+G + +TKN K+C CH A KFISK+ REI +RD +R+HHF+ G CSC
Sbjct: 1028 HLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHHFEGGRCSC 1080
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 164/385 (42%), Gaps = 66/385 (17%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GFG + L+ Y+ + + NA +FDR+P ++ WN +I NG AIEL
Sbjct: 439 LGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIEL 498
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+ G D+ T L AC+ GR +H ++ + + AL+DMY+
Sbjct: 499 FVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSN 558
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
CS + Q+F + +++ P + +V
Sbjct: 559 CSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSV 618
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A +L QG+ +HG++ R+ E + V AL++MY C ++ AR +F+ + K +
Sbjct: 619 LHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDI 678
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACS--------------- 252
+SWN +I GY+ + + ++ LF M + +P+ +T +L A +
Sbjct: 679 ISWNTLIGGYSRNNFANESFSLFSDMLLQFKPNTVTMTCILPAVASISSLERGREIHAYA 738
Query: 253 --RGGLFDE-------------GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
RG L D G + ++ D ++ +T M+ G G +A
Sbjct: 739 LRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAV 798
Query: 298 DLIMQMR---VKPDPGVWGALLNSC 319
L QMR V+PD + A+L +C
Sbjct: 799 ALFEQMRGSGVEPDTASFSAILYAC 823
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 136/302 (45%), Gaps = 35/302 (11%)
Query: 4 GFHPVLATKLVHLYSACDCLHNAHQLFDRIPQR-NLFLWNVLIRAYAWNGPYEVAIELYY 62
G L +KLV +Y C + +A ++FD +P + N+ +WN+++ YA +E ++ L+
Sbjct: 340 GIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFE 399
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
++ E+G+ PD LK + LS +G H +++ + T V ALI YAK +
Sbjct: 400 QMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSN 459
Query: 123 CVVNARQVFDKILERDP----------------SEA-----------------TLVTVIS 149
+ NA VFD++ +D SEA TL++V+
Sbjct: 460 MIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLP 519
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A A GR +HG+S + + AL+DMY+ C +F + +K VVS
Sbjct: 520 ACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVS 579
Query: 210 WNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
W AMIT Y G K L ++M D ++PD VL + +G+ +
Sbjct: 580 WTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAI 639
Query: 269 RD 270
R+
Sbjct: 640 RN 641
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 174/404 (43%), Gaps = 67/404 (16%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQR--NLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
VL +LV Y C L A +FD +P R ++ +W L+ AYA G ++ + L+ ++
Sbjct: 131 VLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQ 190
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G+ PD LK ++L +I EG IH + + V ALI +Y++C C+
Sbjct: 191 CCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCME 250
Query: 126 NARQVFDKILERDP---------------------------------SEATLVTVISASA 152
+A QVFD + RD S T+++V+ A A
Sbjct: 251 DAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACA 310
Query: 153 DIAALPQGRELHGFSWRH---------RFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
++ G+ +HG+S + + ++ + + LV MY KCG + AR +F+ +
Sbjct: 311 ELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMP 370
Query: 204 EK-RVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLS-----ACSRGGL 256
K V WN ++ GYA ++L LFE+M + + PD +L +C+R GL
Sbjct: 371 SKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGL 430
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTC--MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGA 314
G + + Q C ++ S +D A L+ D W +
Sbjct: 431 VAHGYLV--------KLGFGTQCAVCNALISFYAKSNMIDNAV-LVFDRMPHQDTISWNS 481
Query: 315 LLNSCKLHGHVKLAELALEKLIE--LEPHDAGNYVILSNIYARA 356
+++ C +G L A+E + ++ H+ + +LS + A A
Sbjct: 482 VISGCTSNG---LNSEAIELFVRMWMQGHELDSTTLLSVLPACA 522
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 161/385 (41%), Gaps = 77/385 (20%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G G +A L+ LYS C C+ +A Q+FD + R+ WN I Y NG ++ A++L
Sbjct: 227 LGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDL 286
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK--WE-------TDVFVG 111
+ ++ G + T L AC+ L G+ +H +++ W+ D +G
Sbjct: 287 FSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALG 346
Query: 112 AALIDMYAKCSCVVNARQVFDKILER---------------------------------- 137
+ L+ MY KC + +AR+VFD + +
Sbjct: 347 SKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGI 406
Query: 138 DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
P E L ++ ++ G HG+ + F V AL+ YAK ++ A
Sbjct: 407 TPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVL 466
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGL 256
+F+++ + +SWN++I+G +G +++A++LF +M + D T + VL AC+R
Sbjct: 467 VFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHY 526
Query: 257 FDEGRMFFESMVR---------------------DYH---------IDPSVQHYTCMVDL 286
+ GR+ V+ D+H +V +T M+
Sbjct: 527 WFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITS 586
Query: 287 LGHSGRLDEACDLIMQM---RVKPD 308
+G D+ L+ +M +KPD
Sbjct: 587 YTRAGLFDKVAGLLQEMVLDGIKPD 611
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + LV +Y C L A LFDR+ ++NL W ++I Y +G + A+ L+
Sbjct: 742 GFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALF 801
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
++ G+ PD +F L AC EG
Sbjct: 802 EQMRGSGVEPDTASFSAILYACCHSGLTAEG 832
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/570 (38%), Positives = 311/570 (54%), Gaps = 69/570 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A +L Y+A L ++ L R + I A++ G + + L +L G
Sbjct: 58 VAFRLQRAYAASGRLDHSLTLLGRTKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEG 117
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY---------- 118
L+P T +L AC LS GR +H + D +V AL+ MY
Sbjct: 118 LLPTAHTLSASLPACRGLSL---GRALHAYAFKLALSGDSYVATALLSMYARAGDAAAAR 174
Query: 119 ---------------AKCSCVVN------ARQVFDKILERD------------------- 138
A +C N AR++FD + +D
Sbjct: 175 ALFDEMPDPHVVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNE 234
Query: 139 --------------PSEATLVTVISASADIAALPQGRELHGFSWRHR-FELNVKVKTALV 183
P E T+V V+SA A + + G+ LH + R +LNV+V TALV
Sbjct: 235 ALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALV 294
Query: 184 DMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHI 242
DMY KCG ++ A +F + K +V WNAMI GYAMHG S KAL++F +++D+ + P I
Sbjct: 295 DMYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDI 354
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
TF+G+L+ACS GL +EGR FF+SM +Y IDP ++HY CMVDLLG +G ++EA L+
Sbjct: 355 TFIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQS 414
Query: 303 MRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGV 362
+ + PD +W +LL +C+LH ++ L + + L+ ++G Y++LSNIYA WE V
Sbjct: 415 LTITPDAVMWVSLLAACRLHKNMALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEV 474
Query: 363 AKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYV 422
A++R +M GI+K CS IE+ K + F++GD SHP DEIYA L + +KE G+V
Sbjct: 475 ARVRSMMKASGIQKEPGCSAIEIDRKVYEFVAGDMSHPCTDEIYAMLDKMNALVKEHGHV 534
Query: 423 PGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFI 482
P TE V HD++ K + HSE+LA+AFGLI++ G+ + I KNL+ C DCH +K I
Sbjct: 535 PQTELVLHDLDEATKEKALAVHSEKLAVAFGLISSRPGSTIKIVKNLRACSDCHAVLKLI 594
Query: 483 SKITEREITVRDVNRYHHFKDGICSCGDYW 512
SKIT R+I RD NR+HHF DG C+CGDYW
Sbjct: 595 SKITSRKIVFRDRNRFHHFVDGSCTCGDYW 624
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 303/524 (57%), Gaps = 34/524 (6%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L A +LFD +P+RN+ WN ++ G E ++ + + G+ PD F +
Sbjct: 185 LGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRC 244
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC---------------VVNA 127
C+ L + GR++H V+R+ + D+ VG++L MY +C C +V+
Sbjct: 245 CAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSC 304
Query: 128 RQVFDKILERDPSEA------------------TLVTVISASADIAALPQGRELHGFSWR 169
+ + SE T V+ IS+ +D+AAL QG+++HG +
Sbjct: 305 NTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMK 364
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
+ V V T LV MY++CG + + +F +AMI+ Y HGH KA++L
Sbjct: 365 AGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIEL 424
Query: 230 FEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
F++M + +P +TF+ +L ACS GL +EG FE M + Y + PSV+HYTC+VDLLG
Sbjct: 425 FKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLG 484
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
SG LDEA LI+ M + PD +W LL++CK + +AE +++IEL+PHD+ +YV+
Sbjct: 485 RSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVL 544
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAK 408
LSNI A + W V+++RK M D ++K SW+E+K H F +GD SHP EI
Sbjct: 545 LSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDEC 604
Query: 409 LKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKN 468
L+ + ++++ GY P V HD+E++EK + HSE+LAIAF ++ P+G + + KN
Sbjct: 605 LEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKN 664
Query: 469 LKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L++CDDCH+AIK +S++T REI VRDV+R+HHFKDG CSC DYW
Sbjct: 665 LRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 708
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
PV+ T LVH+YS C CL ++ ++F + FL + +I AY ++G + AIEL+ +++
Sbjct: 372 PVM-TCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMN 430
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN-KWETDVFVGAALIDMYAKCSCVV 125
G P + TF L ACS EEG E + + + V ++D+ + C+
Sbjct: 431 GGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLD 490
Query: 126 NA 127
A
Sbjct: 491 EA 492
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL R+LH F+ + L+ YA G + AR LFE++ + V+SWN +
Sbjct: 118 ALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFG 177
Query: 216 GYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
GY +G A LF++M + + T+ +++ + G +E FF M R+
Sbjct: 178 GYIKNGDLGGARKLFDEMPER---NVATWNAMVAGLTNLGFDEESLGFFLDMRRE 229
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/508 (40%), Positives = 302/508 (59%), Gaps = 12/508 (2%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T LV Y+ C L A +LF + R++ WN +I + G + A++L ++ E G
Sbjct: 146 VCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEG 205
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYAKCSCVVNA 127
+ P++ T L C L R+I + + +RN+ +G Y C+ A
Sbjct: 206 ICPNSSTIVGVLPTCQCLLY---ARKIFDVMGVRNEVSWSAMIGG-----YVASDCMKEA 257
Query: 128 RQVFD--KILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
+F ++ DP T++ V+ A + +AAL G HG+ F + + AL+DM
Sbjct: 258 LDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDM 317
Query: 186 YAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITF 244
Y+KCG + AR +F ++ +VSWNAMI GY +HG +AL LF + + ++PD ITF
Sbjct: 318 YSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITF 377
Query: 245 VGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
+ +LS+CS GL EGR++F++M RD+ I P ++H CMVD+LG +G +DEA I M
Sbjct: 378 ICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMP 437
Query: 305 VKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAK 364
+PD +W ALL++C++H +++L E +K+ L P GN+V+LSNIY+ A W+ A
Sbjct: 438 FEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAH 497
Query: 365 LRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPG 424
+R D G+KK CSWIE+ HAF+ GD SH +I KL+ L MK GY
Sbjct: 498 IRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAE 557
Query: 425 TESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISK 484
VF DVE +EK ++ HSE+LAIAFG++N G +L+TKNL++C DCH AIKF++
Sbjct: 558 CSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTL 617
Query: 485 ITEREITVRDVNRYHHFKDGICSCGDYW 512
IT+REITVRD NR+HHFK+G C+CGD+W
Sbjct: 618 ITKREITVRDANRFHHFKNGTCNCGDFW 645
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/370 (32%), Positives = 187/370 (50%), Gaps = 44/370 (11%)
Query: 12 KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
KL LY +C+ + A +LFD IP ++ LWN +IRAYAWNGP++ AI+LY+ +L +G+ P
Sbjct: 48 KLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRP 107
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
+ +T+PF LKACS L AIE+G IH E+DVFV AL+D YAKC +V A+++F
Sbjct: 108 NKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLF 167
Query: 132 DKILERDPSEATLVTVISASADIAALPQGRELHGFS-------WRHRFELNVKVKTALVD 184
+ RD V++ +A IA G L+G + + E + +V
Sbjct: 168 SSMSHRD--------VVAWNAMIA----GCSLYGLCDDAVQLIMQMQEEGICPNSSTIVG 215
Query: 185 MYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHIT 243
+ C + AR +F+ + + VSW+AMI GY +ALD+F M+ + PD T
Sbjct: 216 VLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTT 275
Query: 244 FVGVLSACSRGGLFDEGRMFFES----MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
+GVL ACS G F S +VR + D + ++D+ G++ A ++
Sbjct: 276 MLGVLPACSHLAALQHG---FCSHGYLIVRGFATDTLI--CNALIDMYSKCGKISFAREV 330
Query: 300 IMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL--------IELEPHDAGNYVILSN 351
+M + D W A++ +HG L +E L + L+P D +LS+
Sbjct: 331 FNRMD-RHDIVSWNAMIIGYGIHG------LGMEALGLFHDLLALGLKPDDITFICLLSS 383
Query: 352 IYARAANWEG 361
EG
Sbjct: 384 CSHSGLVMEG 393
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 125/278 (44%), Gaps = 45/278 (16%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI----- 134
L+AC ++ E ++IH+ ++N D V L +Y C+ VV AR++FD+I
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74
Query: 135 ----------------------------LERDPSEATLVTVISASADIAALPQGRELHGF 166
L P++ T V+ A + + A+ G E+H
Sbjct: 75 ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSH 134
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ E +V V TALVD YAKCG++ A+ LF + + VV+WNAMI G +++G A
Sbjct: 135 AKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDA 194
Query: 227 LDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
+ L +M++E + P+ T VGVL C R F+ M + ++ M+
Sbjct: 195 VQLIMQMQEEGICPNSSTIVGVLPTCQ---CLLYARKIFDVMGVRNEVS-----WSAMIG 246
Query: 286 LLGHSGRLDEACDLIMQMR---VKPDPGVWGALLNSCK 320
S + EA D+ M+ + PD +L +C
Sbjct: 247 GYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACS 284
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 6/194 (3%)
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ A +L + +++H ++ + V L +Y C V +AR LF+++
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V+ WN +I YA +G A+DL+ M V+P+ T+ VL ACS G L E +
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS-GLLAIEDGVEIH 132
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
S + + ++ V T +VD G L EA L M + D W A++ C L+G
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSLYG-- 189
Query: 326 KLAELALEKLIELE 339
L + A++ +++++
Sbjct: 190 -LCDDAVQLIMQMQ 202
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF ++ L+ +YS C + A ++F+R+ + ++ WN +I Y +G A+ L+
Sbjct: 303 GFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLF 362
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
+ LL +GL PD+ TF L +CS + EGR
Sbjct: 363 HDLLALGLKPDDITFICLLSSCSHSGLVMEGR 394
>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Brachypodium distachyon]
Length = 689
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/548 (38%), Positives = 305/548 (55%), Gaps = 38/548 (6%)
Query: 3 FGF---HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIE 59
FG+ P ++ + +Y CL A +LF+ +P RN+ WN ++ +G +
Sbjct: 142 FGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFK 201
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
Y+ L E G +P+ + AC+ + G + H V+ ++ DV V A++D Y
Sbjct: 202 AYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYG 261
Query: 120 KCSCVVNARQVFDKILER---------------------------------DPSEATLVT 146
KC C AR VFD + R +P++ + +
Sbjct: 262 KCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSS 321
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V++ A + L GR LH + R + N+ V +ALVDMY KCG V+ A +F + E+
Sbjct: 322 VLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERN 381
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
+V+WNAMI GYA G + AL +F+ M P+HIT V V++ACSRGGL +G F
Sbjct: 382 LVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELF 441
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
++M + ++P +HY C+VDLLG +G + A ++I +M ++P VWGALL +CK+HG
Sbjct: 442 DTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGK 501
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
+L +A EKL EL+P D+GN+V+LSN+ A A W +RK M + GIKK CSWI
Sbjct: 502 TELGRIASEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKEPGCSWIT 561
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
KN H F + D H EI A L L+ +M+ +GY+P T+ +DVE +EK + H
Sbjct: 562 WKNVVHVFYAKDTKHDRNSEIQALLAKLKKQMQASGYMPDTQYSLYDVEEEEKETEVFQH 621
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SE+LA+AFGLI+ P + ITKNL+IC DCH A KF+S I REI VRD NR+H+FK
Sbjct: 622 SEKLALAFGLIHIPPSVPIRITKNLRICVDCHRAFKFVSGIVGREIIVRDNNRFHYFKQF 681
Query: 505 ICSCGDYW 512
CSC DYW
Sbjct: 682 ECSCKDYW 689
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 164/386 (42%), Gaps = 40/386 (10%)
Query: 4 GFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
G P + LV+LYS D A P + + I A + A+ +
Sbjct: 42 GLPPFICAHLVNLYSKLDLPAAAASALASDPNPTVVSFTAFISGAAQHARPLAALSAFAA 101
Query: 64 LLEIGLVPDNFTFPFALK--ACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAK 120
+L +GL P++FTFP A K AC+ G +IH +R + D FV A +DMY K
Sbjct: 102 MLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYLPGDPFVSCAAMDMYFK 161
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C+ AR++F+++ R+ P+ ++
Sbjct: 162 TGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAF 221
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+A A L G + HGF F+++V V A+VD Y KC AR +F+ +R +
Sbjct: 222 FNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNS 281
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSW +MI YA HG AL ++ ++ +P VL+ C+ + GR
Sbjct: 282 VSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAV 341
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
VR ID ++ + +VD+ G G +++A + + M + + W A++ G +
Sbjct: 342 AVRSC-IDANIFVASALVDMYGKCGGVEDAEQVFLDMPER-NLVTWNAMIGGYAHIGDAQ 399
Query: 327 LAELALEKLIELEPHDAGNYVILSNI 352
A + +I + N++ L N+
Sbjct: 400 NALAVFDAMIR-SGGTSPNHITLVNV 424
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 144/321 (44%), Gaps = 21/321 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF ++ +V Y C C A +FD + RN W +I AYA +G E A+ +Y
Sbjct: 245 GFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVY 304
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
G P +F L C+ L + GR +H +R+ + ++FV +AL+DMY KC
Sbjct: 305 MGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKC 364
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
V +A QVF + ER+ T +I A I L F R
Sbjct: 365 GGVEDAEQVFLDMPERN--LVTWNAMIGGYAHIGDAQNA--LAVFDAMIRSGGTSPNHIT 420
Query: 182 LVDMYAKC---GLVKVARNLFEQLREK-----RVVSWNAMITGYAMHGHSTKALDLFEKM 233
LV++ C GL K LF+ +RE+ R + ++ G +A ++ ++M
Sbjct: 421 LVNVITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRM 480
Query: 234 KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS-VQHYTCMVDLLGHSGR 292
++P + +L AC G + GR+ E + + +DP ++ + ++L +GR
Sbjct: 481 P--MRPSISVWGALLGACKMHGKTELGRIASEKL---FELDPQDSGNHVLLSNMLASAGR 535
Query: 293 LDEACDLIMQMR---VKPDPG 310
EA D+ +M+ +K +PG
Sbjct: 536 WAEATDVRKEMKNVGIKKEPG 556
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/542 (37%), Positives = 318/542 (58%), Gaps = 35/542 (6%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL- 64
H + +LV Y C +A +LFD +P ++L WN LI ++ + + L +R+
Sbjct: 72 HGFIGDQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMR 131
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
E+GL P+ T + AC+ + ++ G+ IH +++ +V V +LI++Y KC C+
Sbjct: 132 FEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCL 191
Query: 125 VNARQVFDK-----------------------------ILER----DPSEATLVTVISAS 151
A +F+ I+ R + +AT+V+++ A
Sbjct: 192 EAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLAC 251
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
++ +HG+ + N+ + TAL+D+YAK G + + +F + V+W
Sbjct: 252 ENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWT 311
Query: 212 AMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
AM++ YAMHG +A++ FE M ++ V PDH+TF +LSACS GL +EG+ +F+ M
Sbjct: 312 AMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEF 371
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
Y ++ V+HY+CMVDLLG SG L++A LI M ++P+ GVWGAL+ +C++ G+++L +
Sbjct: 372 YGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGACRVRGNIELGKE 431
Query: 331 ALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAH 390
E+L L+P D+ NY+ LSN+Y+ A W +K+R LM +R + ++ CS+IE NK H
Sbjct: 432 VAERLFSLDPSDSRNYITLSNMYSAAGQWRDASKVRALMKERVLIRNPGCSYIEHGNKIH 491
Query: 391 AFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAI 450
F+ GD SHP+ ++IY KL+ L + +E G+ TE V HDV+ + K ++I HSE+LAI
Sbjct: 492 CFVMGDQSHPDTEQIYNKLEELVRKNREVGFASKTEYVLHDVDEEVKEDLINKHSEKLAI 551
Query: 451 AFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGD 510
AFGL+ T G L+ITKN++IC DCH K IS I +R I +RD R+HHF +G+CSCGD
Sbjct: 552 AFGLLVTNAGMPLIITKNIRICGDCHGFAKLISLIEKRTIIIRDTKRFHHFTNGLCSCGD 611
Query: 511 YW 512
YW
Sbjct: 612 YW 613
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 133/282 (47%), Gaps = 43/282 (15%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
+ A S S+I R +H VI++ F+G L+ Y + C +A ++FD++ ++D
Sbjct: 45 ITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPDKDL 104
Query: 139 ---------------------------------PSEATLVTVISASADIAALPQGRELHG 165
P+E T++ V+SA A + L G+ +HG
Sbjct: 105 VSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHG 164
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
+ + L VKV +L+++Y KCG ++ A LFE + + +VSWN+M+ + G + K
Sbjct: 165 IAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEK 224
Query: 226 ALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM---VRDYHIDPSVQHYT 281
+ F M+ + D T V +L AC G+ R E++ + + +D ++ T
Sbjct: 225 GIGYFIMMRRAGINSDQATVVSLLLACENLGV----RKLAEAVHGYILNGGLDGNLAIAT 280
Query: 282 CMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
++DL G L ++C + M + PD W A+L+S +HG
Sbjct: 281 ALLDLYAKLGTLSDSCKVFGGM-INPDAVAWTAMLSSYAMHG 321
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 16/206 (7%)
Query: 138 DPSEATLVTVISASADIA---ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV 194
D + L+T IS + I+ AL R + ++ H F + LV Y + G K
Sbjct: 38 DSLVSALITAISTCSSISYCRAL-HCRVIKSVNYNHGF-----IGDQLVSSYVELGCTKD 91
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACS 252
A LF++L +K +VSWN++I+G++ L L +M+ E ++P+ +T + V+SAC+
Sbjct: 92 ALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACA 151
Query: 253 RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
G D G+ V+ + V+ +++L G G L+ AC L M V+ W
Sbjct: 152 GVGELDVGKCIHGIAVKSGML-LEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVS-W 209
Query: 313 GALLNSCKLHGHVKLAELALEKLIEL 338
+++ +H H+ LAE + I +
Sbjct: 210 NSMV---AVHVHMGLAEKGIGYFIMM 232
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/548 (37%), Positives = 320/548 (58%), Gaps = 39/548 (7%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
+G L TKL+ L + + H LF +P + FL+N +I++ + + Y
Sbjct: 37 YGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYR 96
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
R+L + P N+TF +K+C+ LSA++ G+ +H + + + D +V AAL+ Y+KC
Sbjct: 97 RMLSSNVSPSNYTFTSVIKSCADLSALKIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCG 156
Query: 123 CVVNARQVFDKILER---------------------------------DPSEATLVTVIS 149
+ ARQVFD++ E+ +P AT V+++S
Sbjct: 157 DMEAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDAIRVFYQMRESGFEPDSATFVSLLS 216
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A A A+ G +H + ++NVK+ TAL+++Y++CG V AR +F++++E V +
Sbjct: 217 ACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAA 276
Query: 210 WNAMITGYAMHGHSTKALDLFEKMKDEVQ--PDHITFVGVLSACSRGGLFDEGRMFFESM 267
W AMI+ Y HG+ +A+DLF KM+D+ P+++TFV VLSAC+ GL ++GR ++ M
Sbjct: 277 WTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNVTFVAVLSACAHAGLVEDGRSVYKRM 336
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPD---PGVWGALLNSCKLHGH 324
Y + P V+H+ C+VD+LG +G LDEA I Q+ + P +W A+L +CK+H +
Sbjct: 337 TESYRLIPGVEHHVCIVDMLGRAGFLDEAYRFIQQLDATGNATAPALWTAMLGACKMHRN 396
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
L ++LI LEP + G++V+LSNIYA + + V+ +R M+ ++K + S IE
Sbjct: 397 YDLGVEIAKRLIALEPENPGHHVMLSNIYALSGKTDEVSHIRDRMMRNNLRKQVGYSIIE 456
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
V+NK + F GD SH EIY L+ L R KE GY P +E V H VE +EK + H
Sbjct: 457 VENKTYLFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYH 516
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SE+LA+AFGL+ T D + + + KNL+IC+DCH A K+IS ++ R+I VRD R+HHF++G
Sbjct: 517 SEKLAVAFGLLKTVD-SAITVVKNLRICEDCHSAFKYISIVSNRQIIVRDKLRFHHFQNG 575
Query: 505 ICSCGDYW 512
CSC DYW
Sbjct: 576 SCSCLDYW 583
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 140/310 (45%), Gaps = 43/310 (13%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + LV YS C + A Q+FDR+P++++ WN L+ + NG E AI ++
Sbjct: 137 GFGLDTYVQAALVTFYSKCGDMEAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDAIRVF 196
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
Y++ E G PD+ TF L AC+ AI G +H+ ++ + +V +G ALI++Y++C
Sbjct: 197 YQMRESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRC 256
Query: 122 SCVVNARQVFDKILERD----------------------------------PSEATLVTV 147
V AR+VFDK+ E + P+ T V V
Sbjct: 257 GDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNVTFVAV 316
Query: 148 ISASADIAALPQGRELHG-FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+SA A + GR ++ + +R V+ +VDM + G + A +QL
Sbjct: 317 LSACAHAGLVEDGRSVYKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAYRFIQQLDATG 376
Query: 207 VVS----WNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEG 260
+ W AM+ MH + +++ +++ + P H + + A S G DE
Sbjct: 377 NATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPENPGHHVMLSNIYALS--GKTDEV 434
Query: 261 RMFFESMVRD 270
+ M+R+
Sbjct: 435 SHIRDRMMRN 444
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/516 (39%), Positives = 311/516 (60%), Gaps = 31/516 (6%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L A LF+R+P+R++ WN ++ YA NG + A E++Y++ + + ++ L A
Sbjct: 42 LKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYKMP----LKNGISWNGLLAA 97
Query: 83 CSALSAIEEGRRIHE----------------------DVIRNKWETDVFVGAALIDMYAK 120
IE+ +R+ E ++ N + D +A+I Y++
Sbjct: 98 YVQNGRIEDAKRLFESKMDWTLVSWNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQ 157
Query: 121 CSCVVNARQVFDKILERD---PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
C A F + ++RD + ++ +S ++IAAL GR+LH + ++
Sbjct: 158 NGCSEEALHFFVE-MQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWY 216
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE- 236
V AL+ MY KCG + AR+ F+++ EK VVSWN MI GYA HG +AL +FE MK
Sbjct: 217 VGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTG 276
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
++PD T V VL+ACS GL D+G +F SM RDY I + HYTCMVDLLG +G+L+EA
Sbjct: 277 IRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEA 336
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARA 356
+L+ M +PD WGALL + ++HG+ +L E A + + E+EPH++G Y++LS +YA +
Sbjct: 337 QNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAAS 396
Query: 357 ANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRM 416
W K+R M ++G+KK SW+EV+NK H F GD SHP+ D+IY L+ ++ ++
Sbjct: 397 GRWSDAGKMRLEMRNKGVKKVPGYSWLEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDLKL 456
Query: 417 KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCH 476
K+ GY+ T VFHDVE +EK +M+ HSE+LA+A+G++ P G + + KNL++C+DCH
Sbjct: 457 KQEGYISSTNLVFHDVEEEEKVHMLKYHSEKLAVAYGILYIPAGRPIRVIKNLRVCEDCH 516
Query: 477 IAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
AIK+ISKI R I +RD +R+H+F+ G CSC D+W
Sbjct: 517 NAIKYISKIVGRLIILRDNHRFHYFEGGSCSCRDFW 552
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 121/272 (44%), Gaps = 31/272 (11%)
Query: 105 ETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGREL- 163
E D+F ++ Y + + AR +F+++ ERD + ++S A + + RE+
Sbjct: 23 ERDLFSWNVMLTGYVRNRDLKTARALFERMPERDI--VSWNAMLSGYAQNGFVDEAREIF 80
Query: 164 ------HGFSWRH---RFELNVKVKTALVDMYAKC------------GLVKVARNLFEQL 202
+G SW + N +++ A +K G V+ RNLF+ +
Sbjct: 81 YKMPLKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMGGFVRKRRNLFDNM 140
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGR 261
++ +SW+AMI GY+ +G S +AL F +M+ + + + +F LS CS + GR
Sbjct: 141 PQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGR 200
Query: 262 MFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
+V+ Y V + ++ + G +DEA D ++ ++ D W +++
Sbjct: 201 QLHCRLVKAGYQTGWYVGN--ALLAMYCKCGSIDEARDAFQEI-LEKDVVSWNTMIHGYA 257
Query: 321 LHGHVK--LAELALEKLIELEPHDAGNYVILS 350
HG + L L K + P DA +L+
Sbjct: 258 RHGFGEEALTVFELMKTTGIRPDDATMVSVLA 289
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 54/213 (25%)
Query: 127 ARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
AR +FDK+ ERD FSW ++ Y
Sbjct: 14 ARDLFDKMPERDL--------------------------FSW-----------NVMLTGY 36
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVG 246
+ +K AR LFE++ E+ +VSWNAM++GYA +G +A ++F KM + I++ G
Sbjct: 37 VRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYKMP---LKNGISWNG 93
Query: 247 VLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK 306
+L+A + G ++ + FES +D ++ + C++ G + + +L M +
Sbjct: 94 LLAAYVQNGRIEDAKRLFES-----KMDWTLVSWNCLM-----GGFVRKRRNLFDNMPQR 143
Query: 307 PDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
D W A++ +G +E AL +E++
Sbjct: 144 -DSISWSAMIAGYSQNG---CSEEALHFFVEMQ 172
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 21/241 (8%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ +Y C + A F I ++++ WN +I YA +G E A+ ++ + G
Sbjct: 217 VGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTG 276
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG-AALIDMYAKCSCVVNA 127
+ PD+ T L ACS +++G + R+ T V ++D+ + + A
Sbjct: 277 IRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEA 336
Query: 128 RQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL---NVKVKTALVD 184
+ + K + +P AT ++ AS + EL + + FE+ N + L
Sbjct: 337 QNLM-KNMPFEPDAATWGALLGAS----RIHGNTELGEKAAQIIFEMEPHNSGMYILLSK 391
Query: 185 MYAKCGLVKVARNLFEQLREKRV-----VSW-------NAMITGYAMHGHSTKALDLFEK 232
+YA G A + ++R K V SW + G H H+ K E+
Sbjct: 392 LYAASGRWSDAGKMRLEMRNKGVKKVPGYSWLEVQNKIHTFKVGDTSHPHTDKIYTFLEE 451
Query: 233 M 233
M
Sbjct: 452 M 452
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDH 241
++ Y + +AR+LF+++ E+ + SWN M+TGY + A LFE+M + D
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPER---DI 57
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESM 267
+++ +LS ++ G DE R F M
Sbjct: 58 VSWNAMLSGYAQNGFVDEAREIFYKM 83
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/514 (39%), Positives = 307/514 (59%), Gaps = 35/514 (6%)
Query: 33 IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ R++ W LI YA N + A+ L +L P+ FTF LKA A ++ G
Sbjct: 1 MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60
Query: 93 RRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI------------------ 134
+IH ++ W DV+VG+AL+DMYA+C + A VFD++
Sbjct: 61 EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120
Query: 135 ------------LERDPSEATLVT---VISASADIAALPQGRELHGFSWRHRFELNVKVK 179
++R+ EAT T V SA A I AL QG+ +H + L+ V
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQ 238
++DMYAK G + AR +F+ + +K +V+WN+M+T +A +G +A+ FE+M+ V
Sbjct: 181 NTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 240
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
+ ITF+ +L+ACS GGL EG+ +F+ M+++++++P + HY +VDLLG +G L++A
Sbjct: 241 LNQITFLSILTACSHGGLVKEGKQYFD-MMKEHNLEPEIDHYVTVVDLLGRAGLLNDALV 299
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN 358
I +M +KP VWGALL SC++H + K+ + A + + EL+P D G V+L NIYA
Sbjct: 300 FIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQ 359
Query: 359 WEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKE 418
W+ A++RK+M G+KK ACSW+E++N H F++ D +HP +EIY K + + ++++
Sbjct: 360 WDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRK 419
Query: 419 AGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIA 478
AGYVP T+ V V+ E+ + HSE++A+AF LIN P G + I KN++IC DCH A
Sbjct: 420 AGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSA 479
Query: 479 IKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++ISK+ EREI VRD NR+HHF G CSCGDYW
Sbjct: 480 FRYISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/202 (18%), Positives = 92/202 (45%), Gaps = 8/202 (3%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ ++ +Y+ + +A ++FD + +++L WN ++ A+A G A+ + + + G
Sbjct: 179 VGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCG 238
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ + TF L ACS ++EG++ + + + E ++ ++D+ + ++N
Sbjct: 239 VHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAG-LLNDA 297
Query: 129 QVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL---NVKVKTALVDM 185
VF + P+ A ++ + + + ++ F+ H FEL + L ++
Sbjct: 298 LVFIFKMPMKPTAAVWGALLGS----CRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNI 353
Query: 186 YAKCGLVKVARNLFEQLREKRV 207
YA G A + + ++ V
Sbjct: 354 YASTGQWDAAARVRKMMKATGV 375
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 303/524 (57%), Gaps = 34/524 (6%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L A +LFD +P+RN+ WN ++ G E ++ + + G+ PD F +
Sbjct: 123 LGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRC 182
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC---------------VVNA 127
C+ L + GR++H V+R+ + D+ VG++L MY +C C +V+
Sbjct: 183 CAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSC 242
Query: 128 RQVFDKILERDPSEA------------------TLVTVISASADIAALPQGRELHGFSWR 169
+ + SE T V+ IS+ +D+AAL QG+++HG +
Sbjct: 243 NTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMK 302
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
+ V V T LV MY++CG + + +F +AMI+ Y HGH KA++L
Sbjct: 303 AGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIEL 362
Query: 230 FEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
F++M + +P +TF+ +L ACS GL +EG FE M + Y + PSV+HYTC+VDLLG
Sbjct: 363 FKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLG 422
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
SG LDEA LI+ M + PD +W LL++CK + +AE +++IEL+PHD+ +YV+
Sbjct: 423 RSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVL 482
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAK 408
LSNI A + W V+++RK M D ++K SW+E+K H F +GD SHP EI
Sbjct: 483 LSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDEC 542
Query: 409 LKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKN 468
L+ + ++++ GY P V HD+E++EK + HSE+LAIAF ++ P+G + + KN
Sbjct: 543 LEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKN 602
Query: 469 LKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L++CDDCH+AIK +S++T REI VRDV+R+HHFKDG CSC DYW
Sbjct: 603 LRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 646
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
PV+ T LVH+YS C CL ++ ++F + FL + +I AY ++G + AIEL+ +++
Sbjct: 310 PVM-TCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMN 368
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN-KWETDVFVGAALIDMYAKCSCVV 125
G P + TF L ACS EEG E + + + V ++D+ + C+
Sbjct: 369 GGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLD 428
Query: 126 NA 127
A
Sbjct: 429 EA 430
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL R+LH F+ + L+ YA G + AR LFE++ + V+SWN +
Sbjct: 56 ALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFG 115
Query: 216 GYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
GY +G A LF++M + + T+ +++ + G +E FF M R+
Sbjct: 116 GYIKNGDLGGARKLFDEMPER---NVATWNAMVAGLTNLGFDEESLGFFLDMRRE 167
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/539 (37%), Positives = 310/539 (57%), Gaps = 36/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A L+ +Y C + + ++FDR+ ++ W +I YA + Y AI + + G
Sbjct: 402 IANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEG 461
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D L+ACS L +I +++H IRN D+ + +ID+Y +C V A
Sbjct: 462 IKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGL-LDLILKNRIIDIYGECGEVCYAL 520
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+F+ + ++D P LV ++ A A ++
Sbjct: 521 NIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLS 580
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+L +G+E+HGF R +F + V ++LVDMY+ CG + A +F++ + K VV W AMI
Sbjct: 581 SLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMIN 640
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
MHGH +A+ +F++M + V PDH++F+ +L ACS L DEG+ + + MV Y +
Sbjct: 641 ATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQ 700
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P +HY C+VDLLG SG+ +EA I M ++P VW ALL +C++H + +LA +A +K
Sbjct: 701 PWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDK 760
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L+ELEP + GNYV++SN++A W V ++R M ++G++K ACSWIE+ N H F +
Sbjct: 761 LLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTA 820
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAG-YVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
D SH + I+ KL + +++ G YV T V HDV +EK +++ HSERLAI+FG
Sbjct: 821 RDHSHRDSQAIHLKLAEITEKLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFG 880
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LI+T GT L I KNL++C DCH K +SK+ EREI VRD NR+HHF G CSCGD+W
Sbjct: 881 LISTASGTPLRIAKNLRVCGDCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 154/337 (45%), Gaps = 41/337 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE-- 66
LATKL+ +Y C L +AH+LFD +P R +F WN LI A +G A+ +Y +
Sbjct: 95 LATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASE 154
Query: 67 --IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
G PD T LKAC A G +H +++ + V AL+ MYAKC +
Sbjct: 155 PVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLL 214
Query: 125 VNARQVFD----------------------------KILERDPSEA------TLVTVISA 150
+A +VF+ + R S+ T V V+
Sbjct: 215 DSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQV 274
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
A++A L GRELH + E N++ LV MYA+CG V A +F ++ +K +SW
Sbjct: 275 CAELAQLNHGRELHAALLKCGTEFNIQCNALLV-MYARCGWVDSALRVFREIGDKDYISW 333
Query: 211 NAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
N+M++ Y + +A+D F +M ++ PDH V +LSA G GR V+
Sbjct: 334 NSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVK 393
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK 306
+D +Q ++D+ ++ + + +MR+K
Sbjct: 394 Q-RLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIK 429
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 179/360 (49%), Gaps = 39/360 (10%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ +Y+ C + +A ++F I ++ WN ++ Y N Y AI+ + +++ G PD
Sbjct: 305 LLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPD 364
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+ L A L + GR +H ++ + ++D+ + L+DMY KC V + +VFD
Sbjct: 365 HACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFD 424
Query: 133 KILERDPSEATLV---------------------------------TVISASADIAALPQ 159
++ +D T + +++ A + + ++
Sbjct: 425 RMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISL 484
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
+++H ++ R+ L++ +K ++D+Y +CG V A N+FE L +K +V+W +M+ +A
Sbjct: 485 LKQVHSYAIRNGL-LDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAE 543
Query: 220 HGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSV 277
+G +A+ LF KM + +QPD + VG+L A + +G+ ++R + ++ +V
Sbjct: 544 NGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAV 603
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+ +VD+ G ++ A + + + K D +W A++N+ +HGH K A ++++E
Sbjct: 604 --VSSLVDMYSGCGSMNYALKVFDEAKCK-DVVLWTAMINATGMHGHGKQAIYIFKRMLE 660
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F + + LV +YS C ++ A ++FD +++ LW +I A +G + AI ++
Sbjct: 597 FPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFK 656
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWE 105
R+LE G+ PD+ +F L ACS ++EG + + D++ +K++
Sbjct: 657 RMLETGVSPDHVSFLALLYACSHSKLVDEG-KFYLDMMVSKYK 698
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/527 (41%), Positives = 304/527 (57%), Gaps = 37/527 (7%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI--GLVPDN-FTFPFA 79
L +A LFDR+P+R+ F W+ ++ A+ +G A+ +Y R+L G DN FT A
Sbjct: 109 LASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSA 168
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
L A +A GR +H V+R + D V +AL DMYAK + +AR VFD++ RD
Sbjct: 169 LAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDV 228
Query: 139 --------------------------------PSEATLVTVISASADIAALPQGRELHGF 166
P+E T V+ A A+ + G+++HG
Sbjct: 229 VSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGR 288
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ R + +ALV MY+K G + A +F + + +VSW AMI+GYA +G +A
Sbjct: 289 MAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEA 348
Query: 227 LDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
L F+ + +PDH+TFVGVLSAC+ GL D+G F S+ Y I+ + HY C++D
Sbjct: 349 LHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVID 408
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGN 345
LL SG + A D+I M VKP+ +W +LL C++H +V+LA A E L E+EP +
Sbjct: 409 LLSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEPENPAT 468
Query: 346 YVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEI 405
YV L+NIYA ++ V +R+ M RGI K A SWIEV + H FL GD SHP +EI
Sbjct: 469 YVTLANIYASVGLFDEVENMRRTMELRGITKMPASSWIEVGTRVHVFLVGDKSHPQAEEI 528
Query: 406 YAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLI 465
YA LK L +M+E GYV T V HDVE+++K I HSERLA+AFG+I TP G+ + +
Sbjct: 529 YALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGSPIKV 588
Query: 466 TKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
KNL+IC DCH IK ISKI +REI VRD NR+HHFK+G CSC DYW
Sbjct: 589 FKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/530 (39%), Positives = 308/530 (58%), Gaps = 29/530 (5%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL------ 64
T ++ Y + A LFD +P+RN+ W +I YA NG +A +L+ +
Sbjct: 178 TAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEV 237
Query: 65 ---------LEIGLVPD-----NFTFPFALKACSALSAIEEGRRIHEDVIRNKWET---- 106
++ G V D N + AC+A+ + G+R D + +E
Sbjct: 238 SWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAM-MVGFGQRGMVDAAKTVFEKMCER 296
Query: 107 DVFVGAALIDMYAKCSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELH 164
D +A+I Y + ++ A F ++L R P+ +++++++ A +A L GRE+H
Sbjct: 297 DDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVH 356
Query: 165 GFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST 224
R F+++V +AL+ MY KCG + A+ +F K +V WN+MITGYA HG
Sbjct: 357 AAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGE 416
Query: 225 KALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
+AL +F M+ + PD IT++G L+ACS G EGR F SM + I P +HY+CM
Sbjct: 417 QALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCM 476
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDA 343
VDLLG SG ++EA DLI M V+PD +WGAL+ +C++H + ++AE A +KL+ELEP +A
Sbjct: 477 VDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNA 536
Query: 344 GNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDA-SHPNC 402
G YV+LS+IY WE +K+RK + R + KS CSWIE + H F SGD +HP
Sbjct: 537 GPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEH 596
Query: 403 DEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTR 462
I L+ L+G + E+GY V HD++ ++K++ + HSER A+A+GL+ P+G
Sbjct: 597 AAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMP 656
Query: 463 LLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ + KNL++C DCH AIK I+KIT REI +RD NR+HHFKDG CSC DYW
Sbjct: 657 IRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 143/327 (43%), Gaps = 28/327 (8%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y L +A +LF ++P+RN + VL+ G A L+ + + +V
Sbjct: 116 TSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVV 175
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
+ L I E R + +++ + +V A+I YA+ V AR++
Sbjct: 176 ----AWTAMLSGYCQAGRITEARALFDEMPKR----NVVSWTAMISGYAQNGEVNLARKL 227
Query: 131 FDKILERDPSE--ATLVTVISAS--ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
F+ + ER+ A LV I A D A L H V A++ +
Sbjct: 228 FEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEH----------PVAACNAMMVGF 277
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFV 245
+ G+V A+ +FE++ E+ +W+AMI Y + +AL F +M V+P++ + +
Sbjct: 278 GQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVI 337
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
+L+ C+ + D GR +M+R D V + ++ + G LD+A +
Sbjct: 338 SILTVCAALAVLDYGREVHAAMLR-CSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEP 396
Query: 306 KPDPGVWGALLNSCKLHGHVKLAELAL 332
K D +W +++ HG L E AL
Sbjct: 397 K-DIVMWNSMITGYAQHG---LGEQAL 419
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 151/378 (39%), Gaps = 78/378 (20%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL------ 64
++ HL A + + A F+ +P R +N L+ Y N + A+ L+ R+
Sbjct: 22 ARIAHLARAGN-IEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 65 ----LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
L GL T P A +AL++I + V +L+ Y +
Sbjct: 81 SYNALISGLSLRRQTLP---DAAAALASI-------------PFPPSVVSFTSLLRGYVR 124
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
+ +A ++F ++ ER+ T++
Sbjct: 125 HGLLADAIRLFQQMPERNHVSYTVLL---------------------------------G 151
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPD 240
L+D G V AR LF+++ ++ VV+W AM++GY G T+A LF++M +
Sbjct: 152 GLLD----AGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKR---N 204
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
+++ ++S ++ G + R FE M + +T M+ +G +++A +L
Sbjct: 205 VVSWTAMISGYAQNGEVNLARKLFEVMPERNEVS-----WTAMLVGYIQAGHVEDAAELF 259
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN-W 359
M P A++ G V A+ EK+ E D G + + Y +
Sbjct: 260 NAMPEHP-VAACNAMMVGFGQRGMVDAAKTVFEKMCE---RDDGTWSAMIKAYEQNEFLM 315
Query: 360 EGVAKLRKLMIDRGIKKS 377
E ++ R+ M+ RG++ +
Sbjct: 316 EALSTFRE-MLWRGVRPN 332
>gi|224143723|ref|XP_002325053.1| predicted protein [Populus trichocarpa]
gi|222866487|gb|EEF03618.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/550 (40%), Positives = 320/550 (58%), Gaps = 47/550 (8%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV---AIELYYRLL 65
L ++++H S D L+ A+++FD++ N F+WN+LIRA A + + AI LY +L
Sbjct: 59 LYSRILHFSSLHD-LNYAYRVFDQVDNPNSFMWNILIRACAQSQSVHLKREAILLYNTML 117
Query: 66 E-IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
+ PDN TFPF LKAC+ L A+ EG++ H +++ +++DV++ +LI YA C +
Sbjct: 118 QRSSPFPDNHTFPFVLKACAYLFALFEGKQAHAHLLKLGFQSDVYINNSLIHFYASCGSL 177
Query: 125 VNARQVFDKILER---------------------------------DPSEATLVTVISAS 151
+A+ VFDK+ +R +P T+ +VI+A
Sbjct: 178 ESAKNVFDKMPQRSLVSWNAMIDAFVLFGEFETALQLFVQFQQQFFEPDGYTIQSVINAC 237
Query: 152 ADIAALPQGRELHGFSWRH----RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
A + AL G H F R+ +V V +L+DMY KCG + +A +FE +++ V
Sbjct: 238 AGLCALSLGMWAHAFLLRNCGVSVARDHVLVNNSLLDMYCKCGSLDIATQIFEGMQKHDV 297
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMK--DEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
SWN+MI G+AMHG AL+ FE+M P+ ITFVGVLSAC+ + +EGR +F+
Sbjct: 298 TSWNSMILGFAMHGKGELALECFERMIRISRFVPNSITFVGVLSACNHRYMVNEGRKYFD 357
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS-CKLHGH 324
MV +Y I+P ++HY C+VD+L +G +DEA +L+ M +KPD +W +LL+S CK +
Sbjct: 358 MMVNEYKIEPQLEHYGCLVDILARAGLIDEALELVASMPMKPDVVIWRSLLDSCCKKNAS 417
Query: 325 VKLAELALEKLIELEPHD-AGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
V+L+E +++E E D +G YV+LS +YA A+ W V +RKLM + GI K CS I
Sbjct: 418 VELSENIARQILESEEADSSGVYVLLSRVYASASRWNDVGLVRKLMTNNGILKEPGCSLI 477
Query: 384 EVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPG-TESVFHDVENDEKANMIC 442
EV H F +GD SHP EIY L +E R+ GY P +++ D N K + +
Sbjct: 478 EVDGVTHEFFAGDTSHPQTKEIYQVLNVVEERIDSTGYKPDYSQAPMVDELNTSKRDSLR 537
Query: 443 CHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFK 502
HSERLAIA GL+N G + I KNL++CDDCH IS+I EI VRD R+HHFK
Sbjct: 538 LHSERLAIALGLLNLKPGMPIRIFKNLRVCDDCHKVTGLISEIFNVEIIVRDRVRFHHFK 597
Query: 503 DGICSCGDYW 512
DG CSC DYW
Sbjct: 598 DGSCSCMDYW 607
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 113/254 (44%), Gaps = 40/254 (15%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + L+H Y++C L +A +FD++PQR+L WN +I A+ G +E A++L
Sbjct: 155 LGFQSDVYINNSLIHFYASCGSLESAKNVFDKMPQRSLVSWNAMIDAFVLFGEFETALQL 214
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN----KWETDVFVGAALID 116
+ + + PD +T + AC+ L A+ G H ++RN V V +L+D
Sbjct: 215 FVQFQQQFFEPDGYTIQSVINACAGLCALSLGMWAHAFLLRNCGVSVARDHVLVNNSLLD 274
Query: 117 MYAKCSCVVNARQVFDKILERD----------------------------------PSEA 142
MY KC + A Q+F+ + + D P+
Sbjct: 275 MYCKCGSLDIATQIFEGMQKHDVTSWNSMILGFAMHGKGELALECFERMIRISRFVPNSI 334
Query: 143 TLVTVISASADIAALPQGRELHGFSW-RHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
T V V+SA + +GR+ ++ E ++ LVD+ A+ GL+ A L
Sbjct: 335 TFVGVLSACNHRYMVNEGRKYFDMMVNEYKIEPQLEHYGCLVDILARAGLIDEALELVAS 394
Query: 202 LREKR-VVSWNAMI 214
+ K VV W +++
Sbjct: 395 MPMKPDVVIWRSLL 408
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/550 (37%), Positives = 318/550 (57%), Gaps = 39/550 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP-QRNLFLWNVLIRAYAWNGPYEVAIEL 60
GF V+ T ++ +Y C C+ A ++FD + +N W+ ++ AY A+EL
Sbjct: 250 GFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALEL 309
Query: 61 YYRLLEIG---LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDM 117
+ +LL + +V T ++ C+ L+ + G +H I++ + D+ VG L+ M
Sbjct: 310 FCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSM 369
Query: 118 YAKCSCVVNARQVFDKILERD---------------------------------PSEATL 144
YAKC + A + F+++ RD P +ATL
Sbjct: 370 YAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATL 429
Query: 145 VTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE 204
+V+ A A +A L G H ++ F + + AL+DMYAKCG + AR +F+++ +
Sbjct: 430 ASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHK 489
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMF 263
+ +VSWN MI Y +HG +AL LF+ M+ E ++PD +TF+ ++SACS GL EG+ +
Sbjct: 490 RGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYW 549
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
F +M +D+ I P ++HY CMVDLL +G E I +M ++PD VWGALL++C+++
Sbjct: 550 FNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYK 609
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
+V+L E +K+ +L P GN+V+LSN+Y+ W+ A++R ++G +KS CSWI
Sbjct: 610 NVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWI 669
Query: 384 EVKNKAHAFLSGD-ASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMIC 442
E+ H FL G SHP +I KL L MK GY + VF DVE +EK ++
Sbjct: 670 EISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAESSYVFQDVEEEEKERVLL 729
Query: 443 CHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFK 502
HSE+LAIAFG+++ +++TKNL++C DCH AIKFIS +T+R+ITVRD +R+HHFK
Sbjct: 730 YHSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFISLVTKRDITVRDASRFHHFK 789
Query: 503 DGICSCGDYW 512
DGIC+CGD+W
Sbjct: 790 DGICNCGDFW 799
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/281 (39%), Positives = 162/281 (57%), Gaps = 40/281 (14%)
Query: 12 KLVHLYSACDCLHNAHQLFDRIPQR--NLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
KLV LY AC L A +FD++P R N+ LWN+LIRAYAWNGPYE AI+LYY++L G+
Sbjct: 56 KLVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGI 115
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
P+ FTFPF LKACSAL EGR IH D+ R + E++V+V AL+D YAKC C+ +A++
Sbjct: 116 TPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKE 175
Query: 130 VFDKILERD---------------------------------PSEATLVTVISASADIAA 156
VFDK+ +RD P+ +T+V V+ A A + +
Sbjct: 176 VFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNS 235
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-EKRVVSWNAMIT 215
L G+E+HGF R F +V V T ++D+Y KC + AR +F+ + K V+W+AM+
Sbjct: 236 LRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVG 295
Query: 216 GYAMHGHSTKALDLFEKM----KDEVQPDHITFVGVLSACS 252
Y + +AL+LF ++ D + +T V+ C+
Sbjct: 296 AYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCA 336
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 189/408 (46%), Gaps = 46/408 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWN-GPYEVAIELYYRLLEI 67
++T LV Y+ C CL +A ++FD++ +R++ WN +I ++ + G Y+ L ++ +
Sbjct: 156 VSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQM-QN 214
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
+ P++ T L A + ++++ G+ IH +R + DV VG ++D+Y KC C+ A
Sbjct: 215 DVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYA 274
Query: 128 RQVFDK----------------------------------ILERDP---SEATLVTVISA 150
R++FD +L+ D S TL TVI
Sbjct: 275 RRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRV 334
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
A++ L G LH ++ + F L++ V L+ MYAKCG++ A F ++ + VS+
Sbjct: 335 CANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSF 394
Query: 211 NAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSR-GGLFDEGRMFFESMV 268
A+I+GY +G+S + L +F +M+ + P+ T VL AC+ GL +++
Sbjct: 395 TAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAII 454
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ D + + ++D+ G++D A + +M K W ++ + +HG A
Sbjct: 455 CGFTADTMICN--ALIDMYAKCGKIDTARKVFDRMH-KRGIVSWNTMIIAYGIHGIGLEA 511
Query: 329 ELALEKLIE--LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
L + + L+P D ++S EG + D GI
Sbjct: 512 LLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGI 559
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 130/283 (45%), Gaps = 46/283 (16%)
Query: 80 LKACSALSAIEEGRRIHEDVIR--------NKWETDVFVGAALIDMYAKCSCVVNARQVF 131
L++C ++ G+ IH+ +++ N DV L+D+Y CS + AR VF
Sbjct: 16 LESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPF-EKLVDLYIACSELKIARHVF 74
Query: 132 DKILER-----------------------------------DPSEATLVTVISASADIAA 156
DK+ R P+ T V+ A + +
Sbjct: 75 DKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKE 134
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
+GRE+H R R E NV V TALVD YAKCG + A+ +F+++ ++ VV+WN+MI+G
Sbjct: 135 ASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISG 194
Query: 217 YAMH-GHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
+++H G + L +M+++V P+ T VGVL A ++ G+ VR +
Sbjct: 195 FSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGD 254
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
V T ++D+ G +D A + M + + W A++ +
Sbjct: 255 VVVG-TGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGA 296
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 7/167 (4%)
Query: 182 LVDMYAKCGLVKVARNLFEQL--REKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQ 238
LVD+Y C +K+AR++F+++ R K VV WN +I YA +G +A+DL+ KM +
Sbjct: 57 LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGIT 116
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
P+ TF VL ACS EGR ++ ++ +V T +VD G LD+A +
Sbjct: 117 PNRFTFPFVLKACSALKEASEGRE-IHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKE 175
Query: 299 LIMQMRVKPDPGVWGALLNSCKLH--GHVKLAELALEKLIELEPHDA 343
+ +M K D W ++++ LH + ++A L ++ ++ P+ +
Sbjct: 176 VFDKMH-KRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSS 221
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/515 (42%), Positives = 292/515 (56%), Gaps = 35/515 (6%)
Query: 33 IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+P + W LI AY G AI + R G+ PD+FT L AC+ ++ +E G
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60
Query: 93 RRIHEDVIRNKWETD-VFVGAALIDMYAKCSCVVNARQVFDKILERD------------- 138
+ + + + VFV A +D+Y KC + AR VFD++ RD
Sbjct: 61 EAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYAS 120
Query: 139 ---PSEA-----------------TLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
P EA T+V +SA + AL GR+ G N +
Sbjct: 121 NGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVL 180
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-V 237
TAL+DMYAKCG A +F+Q+ E+ ++ WNAMI G M GH A L +MK V
Sbjct: 181 GTALIDMYAKCGSTSEAWMVFQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGV 240
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
+ + TF+G+L +C+ GL ++GR +F +M Y I P ++HY CMVDL +G L+EA
Sbjct: 241 KLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAH 300
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAA 357
LI M + + VWGALL CK+H + LAE AL++LI LEP ++GNYV+LSNIY+ +
Sbjct: 301 QLIGDMPMLANAVVWGALLGGCKIHRNADLAEHALKQLIRLEPWNSGNYVMLSNIYSNSG 360
Query: 358 NWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK 417
WE AKLR M +GI+K A SW+E+ K H F GD SHP D+IYAKL L MK
Sbjct: 361 RWEDAAKLRLEMKAKGIEKVPASSWVELDGKVHKFYVGDDSHPLSDKIYAKLDELGMEMK 420
Query: 418 EAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHI 477
GY P TE V DVEN+EK N + HSE++AIAF LI T G + +TKNL++C DCH
Sbjct: 421 AMGYEPTTEVVMFDVENEEKENTLVHHSEKIAIAFSLITTEPGETIRVTKNLRVCTDCHS 480
Query: 478 AIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
AIK IS+IT REI VRD NR+H F+DG CSC DYW
Sbjct: 481 AIKLISRITCREIVVRDNNRFHCFRDGHCSCNDYW 515
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 25/310 (8%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+AT + LY C + A +FD + R+ W ++ YA NG A++L++ + G
Sbjct: 79 VATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQMEG 138
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
PD +T AL AC+ L A++ GR+ V ++ + +G ALIDMYAKC A
Sbjct: 139 AKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVLGTALIDMYAKCGSTSEAW 198
Query: 129 QVFDKILERDPSEATLVTVISASADIAALP-QGRELHGFSW-----RHRFELNVKVKTAL 182
VF ++LERD +I +A I L G E F+ + +LN L
Sbjct: 199 MVFQQMLERD--------IIVWNAMILGLGMTGHEKIAFALVGQMKKSGVKLNDNTFIGL 250
Query: 183 VDMYAKCGLVKVARNLFEQLR-----EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEV 237
+ GLV R F + R+ + M+ ++ G +A L M +
Sbjct: 251 LCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAHQLIGDMP--M 308
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP-SVQHYTCMVDLLGHSGRLDEA 296
+ + + +L C D + ++R ++P + +Y + ++ +SGR ++A
Sbjct: 309 LANAVVWGALLGGCKIHRNADLAEHALKQLIR---LEPWNSGNYVMLSNIYSNSGRWEDA 365
Query: 297 CDLIMQMRVK 306
L ++M+ K
Sbjct: 366 AKLRLEMKAK 375
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 48/89 (53%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
+PVL T L+ +Y+ C A +F ++ +R++ +WN +I G ++A L ++
Sbjct: 177 NPVLGTALIDMYAKCGSTSEAWMVFQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQMK 236
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRR 94
+ G+ ++ TF L +C+ + +GR+
Sbjct: 237 KSGVKLNDNTFIGLLCSCTHTGLVNDGRQ 265
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/535 (37%), Positives = 311/535 (58%), Gaps = 35/535 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI-GLVP 71
+V+ Y+ L A LFD +P+R+ + W ++ Y E A+ LY + + P
Sbjct: 159 MVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKP 218
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
+ FT A+ A +A+ I G+ IH ++R ++D + ++L+DMY KC C+ AR +F
Sbjct: 219 NIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIF 278
Query: 132 DKILERD---------------------------------PSEATLVTVISASADIAALP 158
DKI+++D P+E T V++A AD+
Sbjct: 279 DKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNACADLTTEE 338
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
GR++HG+ R F+ ++L+DMY KCG ++ AR++ + + +VS ++I GYA
Sbjct: 339 LGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYA 398
Query: 219 MHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
+G +AL F+ + K +PDH+TFV VLSAC+ GL ++G FF S+ + + +
Sbjct: 399 QNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTS 458
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
HYTC+VDLL SGR ++ ++ +M +KP +W ++L C +G++ LAE A ++L +
Sbjct: 459 DHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK 518
Query: 338 LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDA 397
+EP + YV ++NIYA A WE K+RK M + GI K SW E+K K H F++ D
Sbjct: 519 IEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGITKKPGSSWTEIKRKRHVFIAADT 578
Query: 398 SHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINT 457
SHP ++I L L +MKE GYVP T V HDVE+++K + HSE+LA+AF +++T
Sbjct: 579 SHPMYNQIIEFLGELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILST 638
Query: 458 PDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+GT + + KNL+ C DCH AIKFISKIT+R+IT+RD R+H F++G CSC DYW
Sbjct: 639 EEGTAIKVFKNLRSCVDCHSAIKFISKITKRKITIRDSTRFHCFENGQCSCRDYW 693
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 133/301 (44%), Gaps = 44/301 (14%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G VL + L+ +Y C C+ A +FD+I +++ W +I Y + + L+
Sbjct: 250 GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLF 309
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
L+ P+ +TF L AC+ L+ E GR++H + R ++ F ++LIDMY KC
Sbjct: 310 SELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKC 369
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +AR V D + D P T V V+
Sbjct: 370 GNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVL 429
Query: 149 SASADIAALPQGRE-LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK-R 206
SA + +G E + + +H T LVD+ A+ G + +++ ++ K
Sbjct: 430 SACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPS 489
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE---VQPDH-ITFVGVLSACSRGGLF-DEGR 261
W +++ G + +G+ +DL E+ E ++P++ +T+V + + + G + +EG+
Sbjct: 490 KFLWASVLGGCSTYGN----IDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGK 545
Query: 262 M 262
M
Sbjct: 546 M 546
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 120/297 (40%), Gaps = 82/297 (27%)
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+LL P T+ ++ CS A+EEG+++HE + + + + + ++ MYAKC
Sbjct: 77 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCG 136
Query: 123 CVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
+V+AR+VFD++ ERD SW +
Sbjct: 137 SLVDARKVFDEMPERDVC--------------------------SW-----------NVM 159
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM--------- 233
V+ YA+ GL++ ARNLF+++ E+ SW AM+TGY +AL L+ M
Sbjct: 160 VNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPN 219
Query: 234 ----------------------------KDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+ + D + + ++ + G DE R F+
Sbjct: 220 IFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFD 279
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWGALLNSC 319
+ ID V +T M+D S R E L ++ +P+ + +LN+C
Sbjct: 280 KI-----IDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVLNAC 331
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 110/237 (46%), Gaps = 10/237 (4%)
Query: 137 RDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
+ P +T +I + AL +G+++H F + + ++ MYAKCG + AR
Sbjct: 83 KKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDAR 142
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGL 256
+F+++ E+ V SWN M+ GYA G +A +LF++M + D ++ +++ +
Sbjct: 143 KVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPER---DSYSWTAMVTGYVKKDQ 199
Query: 257 FDEGRMFFESMVRDYHIDPSV---QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWG 313
+E + + M R + P++ + R E I++ + D +W
Sbjct: 200 PEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWS 259
Query: 314 ALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANW-EGVAKLRKLM 369
+L++ G + A +K+I+ D ++ + + Y +++ W EG + +L+
Sbjct: 260 SLMDMYGKCGCIDEARNIFDKIID---KDVVSWTSMIDRYFKSSRWREGFSLFSELI 313
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + ++ L+ +Y+ C + +A + D P+ +L LI YA NG + A++
Sbjct: 350 VGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKY 409
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ LL+ G PD+ TF L AC+ +E+G
Sbjct: 410 FDLLLKSGTKPDHVTFVNVLSACTHAGLVEKG 441
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/552 (38%), Positives = 315/552 (57%), Gaps = 46/552 (8%)
Query: 6 HPVLATKLVHLYSACDC----LHNAHQLFDRIPQRNLFLW-NVLIRAYA-----WNGPYE 55
HP L T+L+ L + D L A Q+FDR+P +W N L+R YA +
Sbjct: 56 HPALVTRLLTLCTGPDAGPAHLAYARQVFDRVPHPADAVWYNTLLRGYARSSNPSSSEAA 115
Query: 56 VAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALI 115
A+ ++ R+LE G+ PD +TF LKAC+A A EEGR+ H ++ +V LI
Sbjct: 116 AAVRVFVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHALAVKLGAADHDYVRPTLI 175
Query: 116 DMYAKCSCVVNARQVFDK--------------------------ILERD-------PSEA 142
+MYA+C AR +F +L R+ P+
Sbjct: 176 NMYAECGDARAARVMFGGTDGGCVVSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSV 235
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T+++V+SA A + AL GR +H + + VKV TAL+DMYAKCG ++ A ++F+ +
Sbjct: 236 TVISVLSACALLGALELGRWVHDYVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGM 295
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR 261
K +W+ MI YA HG+ +A+ LFE+MK E ++PD ITF+GVL ACS GL EG
Sbjct: 296 ESKDRQAWSVMIVAYANHGYGREAISLFEEMKKEGMKPDDITFLGVLYACSHSGLVSEGL 355
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
+F+ M +D+ I P ++HY C+ DLL SG+L+ A I ++ + P P +W LL++C
Sbjct: 356 QYFDDM-KDHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGG 414
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
HG +L + E++++L+ G+YVI SN+ A WE + +RKLM ++G+ K CS
Sbjct: 415 HGDFELGKRVFERILKLDDSHGGDYVIFSNLCANTGYWEEMNMVRKLMSEKGVVKVPGCS 474
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFH-DVENDEKANM 440
IE+ N H F +GD HP E + + ++K GYVP T VFH ++ +EKA
Sbjct: 475 SIEIDNTVHEFFAGDGRHPKSQEARKMVDEVIDQLKLVGYVPNTSHVFHVEMGEEEKAIS 534
Query: 441 ICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHH 500
+ HSE+LAIAFGL+NT G L + KNL++C DCH K +S + R I +RD+NR+HH
Sbjct: 535 LKYHSEKLAIAFGLLNTAPGATLRVVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHH 594
Query: 501 FKDGICSCGDYW 512
F++GICSCGDYW
Sbjct: 595 FEEGICSCGDYW 606
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/585 (36%), Positives = 320/585 (54%), Gaps = 81/585 (13%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY------- 61
+ LV +Y+ C ++ A+++F+ I ++++ WN ++ Y+ G ++ A+ L+
Sbjct: 271 VGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEED 330
Query: 62 ---------------------------YRLLEI-GLVPDNFTFPFALKACSALSAIEEGR 93
+R +++ GL P+ T L C+++ A+ G+
Sbjct: 331 IKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGK 390
Query: 94 RIHEDVIRN----KW---ETDVFVGAALIDMYAKCSCVVNARQVFDKILERD-------- 138
+ H VI+N W E D+ V LIDMYAKC AR +FD I +D
Sbjct: 391 QTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTV 450
Query: 139 -----------------------------PSEATLVTVISASADIAALPQGRELHGFSWR 169
P+ TL + A A + L GR+LH ++ R
Sbjct: 451 MIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALR 510
Query: 170 HRFELNV-KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALD 228
+ E V V L+DMY+K G + AR +F+ ++ + VVSW +++TGY MHG +AL
Sbjct: 511 NENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALH 570
Query: 229 LFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLL 287
LF++M K D ITF+ VL ACS G+ D+G ++F MV+ + I P +HY CMVDLL
Sbjct: 571 LFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLL 630
Query: 288 GHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYV 347
G +GRL+EA +LI M ++P VW ALL++ ++H +++L E A KL EL + G+Y
Sbjct: 631 GRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYT 690
Query: 348 ILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYA 407
+LSN+YA A W+ VA++R LM GI+K CSWI+ K F GD SHP ++IY
Sbjct: 691 LLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYN 750
Query: 408 KLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITK 467
L L R+K+ GYVP T HDV+++EK +++ HSE+LA+A+G++ T G + I K
Sbjct: 751 LLLDLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRIHK 810
Query: 468 NLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
NL+IC DCH A+ +IS I + EI +RD +R+HHFK G CSC YW
Sbjct: 811 NLRICGDCHSALTYISMIIDHEIVLRDSSRFHHFKKGSCSCRSYW 855
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 154/306 (50%), Gaps = 43/306 (14%)
Query: 14 VHLYSACDCLHNAHQLFDR-IPQRN-LFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
V Y C A L R IP + +F WN LIR G + + Y ++ +G +P
Sbjct: 66 VGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLP 125
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
D++TFPF LKAC + ++ G +H V N ++VF+ +++ MY +C + +A Q+F
Sbjct: 126 DHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMF 185
Query: 132 DKILERD---------------------------------------PSEATLVTVISASA 152
D++LER P TLV ++ A A
Sbjct: 186 DEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACA 245
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+ AL G+++HGFS R+ +V V ALV MYAKC + A +FE +++K VVSWNA
Sbjct: 246 SVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNA 305
Query: 213 MITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
M+TGY+ G AL LF+ M++E ++ D IT+ V++ ++ G E F M + Y
Sbjct: 306 MVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQM-QLY 364
Query: 272 HIDPSV 277
++P+V
Sbjct: 365 GLEPNV 370
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 139/280 (49%), Gaps = 48/280 (17%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQR---NLFLWNVLIRAYAWNGPYEVAI 58
G G + + +V +Y C L +AHQ+FD + +R ++ WN ++ AY G A+
Sbjct: 157 GLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTAL 216
Query: 59 ELYYRL---LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALI 115
+ +R+ + L PD T L AC+++ A++ G+++H +RN DVFVG AL+
Sbjct: 217 RIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALV 276
Query: 116 DMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELN 175
MYAKCS + A +VF+ I ++D SW
Sbjct: 277 SMYAKCSKMNEANKVFEGIKKKDV--------------------------VSW------- 303
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLREK----RVVSWNAMITGYAMHGHSTKALDLFE 231
A+V Y++ G A +LF+ ++E+ V++W+A+I GYA GH +ALD+F
Sbjct: 304 ----NAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFR 359
Query: 232 KMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
+M+ ++P+ +T +LS C+ G G+ ++++
Sbjct: 360 QMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKN 399
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/538 (39%), Positives = 306/538 (56%), Gaps = 35/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L +++ ++ C + +A +LFD +P++N+ WN +I G Y A L+ + +
Sbjct: 168 LRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXF 227
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ F ++A + L I GR++H ++ DVFV ALIDMY+KC + +A+
Sbjct: 228 SDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQ 287
Query: 129 QVFDKILERD----------------PSEA-----------------TLVTVISASADIA 155
VFD++ E+ EA T +I A +A
Sbjct: 288 CVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLA 347
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+L ++ H RH F L++ TALVD+Y+K G ++ A+++F+ + K V+SWNA+I
Sbjct: 348 SLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIA 407
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GY HG +A+++FE+M E + P+H+TF+ VLSACS GL D G FESM RD+ I
Sbjct: 408 GYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIK 467
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P HY CM++LLG G LDEA LI KP +W ALL +C++H + +L + A EK
Sbjct: 468 PRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEK 527
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L + P NYV+L NIY + E A + + + RG++ ACSWIE+K + + F+S
Sbjct: 528 LYGMGPEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFIS 587
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD H EIY KL L + + GYVP + + DV+ E+ ++ HSE+LAIAFGL
Sbjct: 588 GDKCHAQSKEIYQKLDELMLEISKHGYVPQXKFLLPDVDEQEE-RVLLYHSEKLAIAFGL 646
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
INT D T L I ++ +IC DCH AIK I+ +T REI VRD +R+HHFKDG CSCGDYW
Sbjct: 647 INTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 157/321 (48%), Gaps = 43/321 (13%)
Query: 54 YEVAIELYYRLLEIGLV--PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG 111
Y A+EL+ +LE+ D+ T+ + AC L +I +++ +I + + D ++
Sbjct: 111 YHEALELF-EILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLR 169
Query: 112 AALIDMYAKCSCVVNARQVFDKILER---------------------------------D 138
++ M+ KC +++AR++FD++ E+ D
Sbjct: 170 NRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSD 229
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
VT+I ASA + + GR+LH S + +V V AL+DMY+KCG ++ A+ +
Sbjct: 230 AGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCV 289
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLF 257
F+Q+ EK V WN++I GYA+HG+S +AL ++ +M+D V+ D+ TF ++ C+R
Sbjct: 290 FDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASL 349
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGAL 315
+ + +VR + + T +VDL GR+++A + M P V W AL
Sbjct: 350 EHAKQAHAGLVR-HGFGLDIVANTALVDLYSKWGRIEDAKHVFDMM---PHKNVISWNAL 405
Query: 316 LNSCKLHGHVKLAELALEKLI 336
+ HG A E+++
Sbjct: 406 IAGYGNHGRGVEAVEMFERML 426
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 114/269 (42%), Gaps = 19/269 (7%)
Query: 138 DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
D T ++SA + ++ +++ + + + ++ ++ M+ KCG++ AR
Sbjct: 128 DMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARR 187
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGL 256
LF+++ EK ++SWN +I G G +A LF M + FV ++ A + GL
Sbjct: 188 LFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGL 247
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
GR ++ + V ++D+ G +++A + QM K G W +++
Sbjct: 248 IFAGRQLHSCSLKT-GVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVG-WNSII 305
Query: 317 NSCKLHGHVKLAELALEKLIELEPH----DAGNYVILSNIYARAANWEGVAKLRKLMIDR 372
LHG+ +E AL E+ D + I+ I AR A+ E + ++
Sbjct: 306 AGYALHGY---SEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRH 362
Query: 373 GIKKSIACS---------WIEVKNKAHAF 392
G I + W +++ H F
Sbjct: 363 GFGLDIVANTALVDLYSKWGRIEDAKHVF 391
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/556 (39%), Positives = 321/556 (57%), Gaps = 46/556 (8%)
Query: 2 GFGFHPVLATKLVHLYS-----ACDCLHNAHQLFDRIPQRNLFLW-NVLIRAYAWNGPYE 55
G HP T+L+ L + A L A Q+FDRIP +W N L+R YA G
Sbjct: 57 GLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVVWYNTLLRGYARGGGGG 116
Query: 56 VAIE----LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG 111
E ++ R++E G+ PD +TF LKAC++ A EEGR+ H ++ +V
Sbjct: 117 GGAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVA 176
Query: 112 AALIDMYAKCSCVVNARQVFDK--------------------------ILERD------- 138
LI+MYA+C V AR +FD+ +L R+
Sbjct: 177 PTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLK 236
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P+ TL++V+SA A + AL GR +H + + R + VKV TAL+DMYAKCG ++ A +
Sbjct: 237 PTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGV 296
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLF 257
F+ + + +W+ M+ YA HG+ +A+ +FE+MK + ++PD +TF+GVL ACS G+
Sbjct: 297 FQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMV 356
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
EG +F+SM R+Y I ++HY C+ DLL SG+L+ A I ++ +KP +W LL+
Sbjct: 357 SEGLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLS 415
Query: 318 SCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKS 377
+C HG V + + E+++EL+ G+YVI SN+ A WE + +RKLM ++G+ K
Sbjct: 416 ACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKV 475
Query: 378 IACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFH-DVENDE 436
CS IE+ N H F +GD SHP+ E + + ++K GYVP T VFH ++ +E
Sbjct: 476 PGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFHVEMGEEE 535
Query: 437 KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVN 496
KA + HSE+LAI+FGL+NT GT L I KNL++C DCH K +S + R I +RD+N
Sbjct: 536 KATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRRIILRDLN 595
Query: 497 RYHHFKDGICSCGDYW 512
R+HHF+DG+CSCGDYW
Sbjct: 596 RFHHFEDGVCSCGDYW 611
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/534 (38%), Positives = 306/534 (57%), Gaps = 34/534 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
+VH Y + +LF+ +P R++ W +I NG E A+ ++ ++L G+ P
Sbjct: 142 MVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPT 201
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
TF L AC+ G ++H V++ F+ +LI YA C + +A ++F+
Sbjct: 202 WSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFN 261
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
+ L ++ P+++T + A + AL +
Sbjct: 262 ETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDK 321
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G+E+H + + E +V V +LV MY +CG V A +F + EK +VSWN++I G A
Sbjct: 322 GKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQ 381
Query: 220 HGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
HG AL F +M + V P+ ITF G+LSACSR G+ +GR FFE + R Q
Sbjct: 382 HGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQ 441
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
HY CMVD+LG G+LDEA +L+ M VK + +W ALL++C++H ++++AE A + +++L
Sbjct: 442 HYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILDL 501
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDAS 398
EP+ + YV+LSNIYA A W V+++R M G+ K SW+ ++ K H FLS D S
Sbjct: 502 EPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRS 561
Query: 399 HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTP 458
HP + IY KL WL ++KE GYVP + HDVE+++K M+ HSERLAIAFGL++T
Sbjct: 562 HPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQKEEMLSFHSERLAIAFGLVSTV 621
Query: 459 DGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+G+ + + KNL++C DCH IK +SKI R+I VRD R+HHFK+GICSC DYW
Sbjct: 622 EGSTITVMKNLRVCGDCHSVIKLMSKIVGRKIVVRDSGRFHHFKNGICSCSDYW 675
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 124/259 (47%), Gaps = 39/259 (15%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G FH ++ L+ Y+ C + +AH++F+ +N+ W L+ AY WN ++ A+ +
Sbjct: 231 LGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRV 290
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + ++G +P+ TF LKAC L A+++G+ IH I+ ETDVFVG +L+ MY +
Sbjct: 291 FGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTE 350
Query: 121 CSCVVNARQVFDKILER---------------------------------DPSEATLVTV 147
C V +A VF I E+ DP+E T +
Sbjct: 351 CGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGL 410
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNV---KVKTALVDMYAKCGLVKVARNLFEQLRE 204
+SA + L +GR F + R++ NV + +VD+ +CG + A L +
Sbjct: 411 LSACSRSGMLLKGRCF--FEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPV 468
Query: 205 K-RVVSWNAMITGYAMHGH 222
K + W A+++ +H +
Sbjct: 469 KANSMIWLALLSACRVHSN 487
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 10/172 (5%)
Query: 114 LIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFE 173
+I Y + + +A ++FD++ RD + ++I D L L + E
Sbjct: 49 MIAGYTRNDRLCDALKLFDRMSVRDV--VSWNSMIKGCLDCGNLGMATRL----FDEMPE 102
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
NV T +V+ Y K G V++A+ LF + K V +WNAM+ GY +G + + LFE+M
Sbjct: 103 KNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEM 162
Query: 234 KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
D I++ ++ G +E F+ M+R ++P+ + C++
Sbjct: 163 PVR---DVISWTSMIGGLDLNGKSEEALFVFKKMLRS-GVEPTWSTFACVLS 210
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 11/168 (6%)
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
N+ + T ++ Y + + A LF+++ + VVSWN+MI G G+ A LF++M
Sbjct: 42 NLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMP 101
Query: 235 DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLD 294
++ T V R L R+F + V+D V + MV +GR++
Sbjct: 102 EKNVISWTTMVNGYLKFGRVELAQ--RLFLDMHVKD------VAAWNAMVHGYFENGRVE 153
Query: 295 EACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEP 340
E L +M V+ D W +++ L+G + A +K++ +EP
Sbjct: 154 EGVRLFEEMPVR-DVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEP 200
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRG 254
AR +F+++ + + MI GY + AL LF++M D +++ ++ C
Sbjct: 31 ARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVR---DVVSWNSMIKGC--- 84
Query: 255 GLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGA 314
D G + + + D + +V +T MV+ GR++ A L + M VK D W A
Sbjct: 85 --LDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMHVK-DVAAWNA 141
Query: 315 LLNSCKLHGHVK 326
+++ +G V+
Sbjct: 142 MVHGYFENGRVE 153
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/520 (42%), Positives = 309/520 (59%), Gaps = 33/520 (6%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDN--------- 73
A FDR+P ++ WN +I YA G E A EL+Y ++E V N
Sbjct: 140 FEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIEC 199
Query: 74 --------FTFPFALKACSALSA----------IEEGRRIHEDVIRNKWETDVFVGAALI 115
F ++ A +A +E + +D+ NK ++ A+I
Sbjct: 200 GDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNK---NLVTWNAMI 256
Query: 116 DMYAKCSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFE 173
Y + S + ++F +LE P+ + L + + ++++AL GR++H +
Sbjct: 257 SGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLC 316
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
+V T+L+ MY KCG + A LFE +++K VV+WNAMI+GYA HG++ KAL LF +M
Sbjct: 317 NDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREM 376
Query: 234 KD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGR 292
D +++PD ITFV VL AC+ GL + G +FESMVRDY ++P HYTCMVDLLG +G+
Sbjct: 377 IDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGK 436
Query: 293 LDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNI 352
L+EA LI M +P V+G LL +C++H +V+LAE A EKL++L +A YV L+NI
Sbjct: 437 LEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANI 496
Query: 353 YARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWL 412
YA WE VA++RK M + + K SWIE++NK H F S D HP D I+ KLK L
Sbjct: 497 YASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKEL 556
Query: 413 EGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKIC 472
E +MK AGY P E H+VE ++K ++ HSE+LA+AFG I P G+++ + KNL+IC
Sbjct: 557 EKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRIC 616
Query: 473 DDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
DCH AIKFIS+I +REI VRD R+HHFKDG CSCGDYW
Sbjct: 617 GDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ +Y C L +A +LF+ + ++++ WN +I YA +G + A+ L+ +++ +
Sbjct: 323 TSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIR 382
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRN-KWETDVFVGAALIDMYAKCSCVVNARQ 129
PD TF L AC+ + G E ++R+ K E ++D+ + + A +
Sbjct: 383 PDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALK 442
Query: 130 VFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA---LVDMY 186
+ + R P A T++ A + + EL F+ +LN + L ++Y
Sbjct: 443 LIRSMPFR-PHAAVFGTLLGA----CRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIY 497
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
A + + ++++E VV + GY+
Sbjct: 498 ASKNRWEDVARVRKRMKESNVVK----VPGYS 525
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 123/296 (41%), Gaps = 31/296 (10%)
Query: 114 LIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFE 173
LI + S ++ A Q+FD+I E D T I S + + + F R F+
Sbjct: 99 LIGISKDPSRMMEAHQLFDEIPEPD----TFSYNIMLSCYVRNV-NFEKAQSFFDRMPFK 153
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
T ++ YA+ G ++ AR LF + EK VSWNAMI+GY G KA F
Sbjct: 154 DAASWNT-MITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFF--- 209
Query: 234 KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
+V P + V +A G + + E+M +D ++ ++ + M+ + R
Sbjct: 210 --KVAP--VRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRP 265
Query: 294 DEACDLIMQM---RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEP--HDAGNYVI 348
++ L M ++P+ + L C ++L + +++ +D
Sbjct: 266 EDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGR-QIHQIVSKSTLCNDVTALTS 324
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDE 404
L ++Y + KL ++M KK +W +A +SG A H N D+
Sbjct: 325 LISMYCKCGELGDAWKLFEVM-----KKKDVVAW-------NAMISGYAQHGNADK 368
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/556 (39%), Positives = 321/556 (57%), Gaps = 46/556 (8%)
Query: 2 GFGFHPVLATKLVHLYS-----ACDCLHNAHQLFDRIPQRNLFLW-NVLIRAYAWNGPYE 55
G HP T+L+ L + A L A Q+FDRIP +W N L+R YA G
Sbjct: 57 GLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVIWYNTLLRGYARGGGGG 116
Query: 56 VAIE----LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG 111
E ++ R++E G+ PD +TF LKAC++ A EEGR+ H ++ +V
Sbjct: 117 GGAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVA 176
Query: 112 AALIDMYAKCSCVVNARQVFDK--------------------------ILERD------- 138
LI+MYA+C V AR +FD+ +L R+
Sbjct: 177 PTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLK 236
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P+ TL++V+SA A + AL GR +H + + R + VKV TAL+DMYAKCG ++ A +
Sbjct: 237 PTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGV 296
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLF 257
F+ + + +W+ M+ YA HG+ +A+ +FE+MK + ++PD +TF+GVL ACS G+
Sbjct: 297 FQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMV 356
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
EG +F+SM R+Y I ++HY C+ DLL SG+L+ A I ++ +KP +W LL+
Sbjct: 357 SEGLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLS 415
Query: 318 SCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKS 377
+C HG V + + E+++EL+ G+YVI SN+ A WE + +RKLM ++G+ K
Sbjct: 416 ACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKV 475
Query: 378 IACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFH-DVENDE 436
CS IE+ N H F +GD SHP+ E + + ++K GYVP T VFH ++ +E
Sbjct: 476 PGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNTSHVFHVEMGEEE 535
Query: 437 KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVN 496
KA + HSE+LAI+FGL+NT GT L I KNL++C DCH K +S + R I +RD+N
Sbjct: 536 KATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSMVFNRRIILRDLN 595
Query: 497 RYHHFKDGICSCGDYW 512
R+HHF+DG+CSCGDYW
Sbjct: 596 RFHHFEDGVCSCGDYW 611
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/530 (39%), Positives = 309/530 (58%), Gaps = 29/530 (5%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL------ 64
T ++ Y + A LFD +P+RN+ W +I YA NG +A +L+ +
Sbjct: 178 TAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEV 237
Query: 65 ---------LEIGLVPD-----NFTFPFALKACSALSAIEEGRRIHEDVIRNKWET---- 106
++ G V D N + AC+A+ + G+R D + +E
Sbjct: 238 SWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAM-MVGFGQRGMVDAAKTVFEKMRER 296
Query: 107 DVFVGAALIDMYAKCSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELH 164
D +A+I Y + ++ A F ++L R P+ +++++++ A +A L GRE+H
Sbjct: 297 DDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVH 356
Query: 165 GFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST 224
R F+++V +AL+ MY KCG + A+ +F K +V WN+MITGYA HG
Sbjct: 357 AAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGE 416
Query: 225 KALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
+AL +F M+ + PD IT++G L+ACS G EGR F SM + I P +HY+CM
Sbjct: 417 QALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCM 476
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDA 343
VDLLG SG ++EA DLI M V+PD +WGAL+ +C++H + ++AE+A +KL+ELEP +A
Sbjct: 477 VDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNA 536
Query: 344 GNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDA-SHPNC 402
G YV+LS+IY WE +K+RK + R + KS CSWIE + H F SGD +HP
Sbjct: 537 GPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEH 596
Query: 403 DEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTR 462
I L+ L+G + E+GY V HD++ ++K++ + HSER A+A+GL+ P+G
Sbjct: 597 AAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMP 656
Query: 463 LLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ + KNL++C DCH AIK I+KIT REI +RD NR+HHFKDG CSC DYW
Sbjct: 657 IRVMKNLRVCGDCHSAIKLIAKITSREIVLRDANRFHHFKDGFCSCRDYW 706
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 143/323 (44%), Gaps = 20/323 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y L +A +LF ++P+RN + VL+ G A L+ + + +V
Sbjct: 116 TSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVV 175
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
+ L I E R + +++ + +V A+I YA+ V AR++
Sbjct: 176 ----AWTAMLSGYCQAGRITEARALFDEMPKR----NVVSWTAMISGYAQNGEVNLARKL 227
Query: 131 FDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCG 190
F+ + ER+ E + ++ + EL H V A++ + + G
Sbjct: 228 FEVMPERN--EVSWTAMLVGYIQAGHVEDAAELFNAMPEH----PVAACNAMMVGFGQRG 281
Query: 191 LVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLS 249
+V A+ +FE++RE+ +W+AMI Y + +AL F +M V+P++ + + +L+
Sbjct: 282 MVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILT 341
Query: 250 ACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
C+ + D GR +M+R D V + ++ + G LD+A + K D
Sbjct: 342 VCAALAVLDYGREVHAAMLR-CSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPK-DI 399
Query: 310 GVWGALLNSCKLHGHVKLAELAL 332
+W +++ HG L E AL
Sbjct: 400 VMWNSMITGYAQHG---LGEQAL 419
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 148/378 (39%), Gaps = 78/378 (20%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL------ 64
++ HL A + + A F+ +P R +N L+ Y N + A+ L+ R+
Sbjct: 22 ARIAHLARAGN-IEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 65 ----LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
L GL T P A +AL++I + V +L+ Y +
Sbjct: 81 SYNALISGLSLRRQTLP---DAAAALASI-------------PFPPSVVSFTSLLRGYVR 124
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
+ +A ++F ++ ER N T
Sbjct: 125 HGLLADAIRLFQQMPER-------------------------------------NHVSYT 147
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPD 240
L+ G V AR LF+++ ++ VV+W AM++GY G T+A LF++M +
Sbjct: 148 VLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKR---N 204
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
+++ ++S ++ G + R FE M + +T M+ +G +++A +L
Sbjct: 205 VVSWTAMISGYAQNGEVNLARKLFEVMPERNEVS-----WTAMLVGYIQAGHVEDAAELF 259
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN-W 359
M P A++ G V A+ EK+ E D G + + Y +
Sbjct: 260 NAMPEHPVAAC-NAMMVGFGQRGMVDAAKTVFEKMRE---RDDGTWSAMIKAYEQNEFLM 315
Query: 360 EGVAKLRKLMIDRGIKKS 377
E ++ R+ M+ RG++ +
Sbjct: 316 EALSTFRE-MLWRGVRPN 332
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/521 (40%), Positives = 306/521 (58%), Gaps = 38/521 (7%)
Query: 28 QLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV-PDNFTFPFALKACSAL 86
LFD+IP F +N LIRA G A+ +Y R+L G P++FT FALKAC+A+
Sbjct: 130 NLFDQIPDPTAFCYNSLIRALPAAGSAP-ALAVYRRMLRAGSPRPNSFTLAFALKACAAV 188
Query: 87 SAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD-------------- 132
A EGR++H +R T +V L+++YAKC V AR VFD
Sbjct: 189 PAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWSAM 248
Query: 133 --------------------KILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
+ + +P E T+V+VISA A AL G+ +H + R
Sbjct: 249 VSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGI 308
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
+++++ TAL+DMYAKCGL++ AR +F+ + EK +W+AMI G+A+HG AL LF +
Sbjct: 309 TVDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSR 368
Query: 233 MKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
M + +V+P+++TF+GVLSAC+ GL ++GR ++ S++++ I PS+++Y CMVDLL SG
Sbjct: 369 MLELKVRPNNVTFIGVLSACAHSGLVEDGRRYW-SIMQNLGIKPSMENYGCMVDLLCRSG 427
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSN 351
LD+A ++ M V P+ +W LL +CK + +AE A ++L+ELEPH+ NYV+LSN
Sbjct: 428 LLDDAYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLSN 487
Query: 352 IYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKW 411
+YA + W+ V+ LR+ M + + S IE+ H F+ D SHP EI L+
Sbjct: 488 LYASNSQWDRVSYLRRKMKGKNVTAIAGRSSIEINGHLHEFVVSDDSHPEIREIRLVLRE 547
Query: 412 LEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKI 471
+ R++ AG+ P T +V HDV +EK +C HSERLAIA+GL+ T + + KNL+
Sbjct: 548 MADRVRRAGHKPWTAAVLHDVGEEEKEAALCQHSERLAIAYGLLKTRAPHVIRVVKNLRF 607
Query: 472 CDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
C DCH K ISK REI VRD R+H F G CSC D+W
Sbjct: 608 CLDCHEVAKIISKAYNREIVVRDRVRFHKFMGGSCSCKDFW 648
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/579 (38%), Positives = 318/579 (54%), Gaps = 82/579 (14%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAW-----NGPYEVAIELYY 62
+L T+L+ S LH +H P FLWN LIRA+ GP I ++
Sbjct: 2 LLPTRLIS--STHPTLHFSH------PTLESFLWNTLIRAHVQARAQPTGPTHSPISIFV 53
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC- 121
R+ G+ PD TFPF L++ ++ S + GR +H ++R D FV +LI MY+ C
Sbjct: 54 RMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCG 113
Query: 122 --------------------SCVVNA----------RQVFDKILERD------------- 138
+ ++NA R +F + ER+
Sbjct: 114 NLGFARQVFDEIPQPDLPSWNSIINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVR 173
Query: 139 -----------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELN 175
P+E T+ V++A + AL G+ H + + ++
Sbjct: 174 CGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVD 233
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQL-REKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
V + TAL+DMYAKCG V+ A +F L K V++W+AMI+G AMHG + + + LF KM
Sbjct: 234 VVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMI 293
Query: 235 DE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
++ V+P+ +TF+ V AC GGL EG+ + M DY I P++QHY CMVDL G +GR+
Sbjct: 294 NQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRI 353
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIY 353
EA +++ M ++PD VWGALL+ ++HG ++ ELAL+KLIELEP ++G YV+LSN+Y
Sbjct: 354 KEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVY 413
Query: 354 ARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLE 413
A+ WE V +R LM GIKK CS IEV H F GD SHP +I+ L+ +
Sbjct: 414 AKRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEIL 473
Query: 414 GRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICD 473
R+K GYV T+ V D++ + K + HSE+LA+A+G + T GT + I KNL+IC
Sbjct: 474 ERLKVEGYVGNTKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICR 533
Query: 474 DCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
DCH+AIK ISK+ +REI VRD NR+HHF G+CSC DYW
Sbjct: 534 DCHVAIKMISKVFDREIIVRDCNRFHHFTQGLCSCRDYW 572
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 127/311 (40%), Gaps = 71/311 (22%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQ------------------------- 35
G P + T L+ +YS+C L A Q+FD IPQ
Sbjct: 93 FGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGLVDMARNL 152
Query: 36 ------RNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG---LVPDNFTFPFALKACSAL 86
RN+ W+ +I Y G Y+ A+ L+ + +G + P+ FT L AC L
Sbjct: 153 FAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRL 212
Query: 87 SAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV---------------- 130
A+E G+ H + + DV +G ALIDMYAKC V A V
Sbjct: 213 GALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAM 272
Query: 131 ----------------FDKILERD--PSEATLVTVISASADIAALPQGRE-LHGFSWRHR 171
F K++ + P+ T + V A + +G++ L + +
Sbjct: 273 ISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYS 332
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQL-REKRVVSWNAMITGYAMHGHSTKALDLF 230
++ +VD+Y + G +K A N+ + + E V+ W A+++G MHG + +L
Sbjct: 333 IIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHG-DIETCELA 391
Query: 231 EKMKDEVQPDH 241
K E++P +
Sbjct: 392 LKKLIELEPTN 402
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/571 (37%), Positives = 310/571 (54%), Gaps = 69/571 (12%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T ++ Y L A Q D + ++ + WN +I Y +G + A+E++ ++ +G+
Sbjct: 229 TTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQ 288
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNK----WETDVFVGAALIDMYAKCSCV-- 124
D FT+ L AC+ G+++H ++R + + + V AL +Y KC V
Sbjct: 289 WDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDE 348
Query: 125 -----------------------VNARQV------FDKILER------------------ 137
VNA ++ F+++ ER
Sbjct: 349 ARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFG 408
Query: 138 ---------------DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
+P + I A A +AAL GR+LH R F+ ++ AL
Sbjct: 409 EESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNAL 468
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDH 241
+ MYAKCG+V+ A LF + VSWNAMI HGH +AL+LFE M K+++ PD
Sbjct: 469 ITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDR 528
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
ITF+ VLS CS GL +EG +F+SM Y I P HY M+DLL +G+ EA D+I
Sbjct: 529 ITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIE 588
Query: 302 QMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEG 361
M V+P P +W ALL C++HG++ L A E+L EL P G YV+LSN+YA W+
Sbjct: 589 TMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDD 648
Query: 362 VAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGY 421
VAK+RKLM D+G+KK CSWIEV+NK H FL D HP +Y L+ L +M++ GY
Sbjct: 649 VAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGY 708
Query: 422 VPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKF 481
+P T+ V HD+E+++K ++ HSE+LA+ FGL+ P G + + KNL+IC DCH A KF
Sbjct: 709 IPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKF 768
Query: 482 ISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+SK+ EREI VRD R+HHFK+G CSCG+YW
Sbjct: 769 MSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 175/400 (43%), Gaps = 65/400 (16%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQ--RNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
V T L+ +S+ + A ++F P R+ +N +I Y+ N AIEL+ LL
Sbjct: 82 VARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLL 141
Query: 66 EIGLVPDNFTFPFALKACSALSAIE-EGRRIHEDVIRNKWETDVFVGAALIDMYAKCS-- 122
G PDNFTF L A + + E + ++IH V+++ V AL+ ++ KC+
Sbjct: 142 RNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASS 201
Query: 123 -------CVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELN 175
+ AR++FD++ ERD SW
Sbjct: 202 PLVSSSSLMAAARKLFDEMTERDE--------------------------LSW------- 228
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK- 234
T ++ Y + G + AR + + EK VV+WNAMI+GY HG +AL++F KM
Sbjct: 229 ----TTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYL 284
Query: 235 DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY---HIDPSVQHYTCMVDLLGHSG 291
+Q D T+ VLSAC+ G F G+ ++R +D S+ + L G
Sbjct: 285 LGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCG 344
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSN 351
++DEA + QM VK D W A+L+ G + A+ E++ E + + ++ +
Sbjct: 345 KVDEARQVFNQMPVK-DLVSWNAILSGYVNAGRIDEAKSFFEEMPE---RNLLTWTVMIS 400
Query: 352 IYARAANWEGVAKLRKLMIDRGIKKS--------IACSWI 383
A+ E KL M G + IAC+W+
Sbjct: 401 GLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWL 440
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF L+ +Y+ C + AH LF +P + WN +I A +G A+EL
Sbjct: 456 LGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALEL 515
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRR 94
+ +L+ ++PD TF L CS +EEG R
Sbjct: 516 FELMLKEDILPDRITFLTVLSTCSHAGLVEEGHR 549
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/556 (36%), Positives = 308/556 (55%), Gaps = 69/556 (12%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-EIGLVPDNFTFPFALKACS 84
A LF+ +P R++ WN +I Y NG A++L+ R+L E + PD FT L AC+
Sbjct: 249 AESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACA 308
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN------------------ 126
L + G+++H ++R + + V ALI YAK V N
Sbjct: 309 NLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISF 368
Query: 127 ---------------ARQVFDKILERD--------------------------------- 138
AR++F + RD
Sbjct: 369 TALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPE 428
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P+ TL V+S A +A L G+++H + R E + V A++ MYA+ G AR +
Sbjct: 429 PNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRM 488
Query: 199 FEQL-REKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGL 256
F+Q+ K ++W +MI A HG +A+ LFE+M + V+PD IT+VGVLSACS G
Sbjct: 489 FDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGF 548
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
+EG+ +++ + ++ I P + HY CMVDLL +G EA + I +M V+PD WG+LL
Sbjct: 549 VNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLL 608
Query: 317 NSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKK 376
++C++H + +LAELA EKL+ ++P+++G Y ++N+Y+ W A++ K ++ ++K
Sbjct: 609 SACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRK 668
Query: 377 SIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDE 436
SW +++K H F + D HP D +YA + +K AG+VP +SV HDV+++
Sbjct: 669 ETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDEL 728
Query: 437 KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVN 496
K ++ HSE+LAIAFGLI+TP+ T L + KNL++C+DCH AIK ISK+T+REI VRD
Sbjct: 729 KEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDAT 788
Query: 497 RYHHFKDGICSCGDYW 512
R+HHF+DG+CSC DYW
Sbjct: 789 RFHHFRDGLCSCKDYW 804
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 158/375 (42%), Gaps = 71/375 (18%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRN----------------------- 37
+G G +A ++++Y C A +F+R+P R+
Sbjct: 193 LGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESL 252
Query: 38 --------LFLWNVLIRAYAWNGPYEVAIELYYRLL-EIGLVPDNFTFPFALKACSALSA 88
+ WN +I Y NG A++L+ R+L E + PD FT L AC+ L
Sbjct: 253 FESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGN 312
Query: 89 IEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVI 148
+ G+++H ++R + + V ALI YAK V NAR++ D+ +E D
Sbjct: 313 VRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETD---------- 362
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
LNV TAL++ Y K G ++ AR +F + + VV
Sbjct: 363 -------------------------LNVISFTALLEGYVKIGDMESAREMFGVMNNRDVV 397
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W AMI GY +G + +A+DLF M +P+ T VLS C+ D G+
Sbjct: 398 AWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRA 457
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+R ++ S ++ + SG A + Q+ + + W +++ + HG +
Sbjct: 458 IRSL-LERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEE 516
Query: 328 AELALEKLIE--LEP 340
A E+++ +EP
Sbjct: 517 AVGLFEEMLRAGVEP 531
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 139/321 (43%), Gaps = 44/321 (13%)
Query: 12 KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
L+ +++ L +A +F +P+R+ W V++ G + AI+ + G P
Sbjct: 103 SLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTP 162
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
FT L +C+ A GR++H V++ + V V ++++MY KC A VF
Sbjct: 163 TQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVF 222
Query: 132 DKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGL 191
+++ R S SW A+V + G
Sbjct: 223 ERMPVRSVS--------------------------SW-----------NAMVSLNTHLGR 245
Query: 192 VKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLS 249
+ +A +LFE + + +VSWNAMI GY +G KAL LF +M + + PD T VLS
Sbjct: 246 MDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLS 305
Query: 250 ACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
AC+ G G+ ++R + + Q ++ SG ++ A IM ++ D
Sbjct: 306 ACANLGNVRIGKQVHAYILRT-EMAYNSQVTNALISTYAKSGSVENA-RRIMDQSMETDL 363
Query: 310 GVWGALLNSCKLHGHVKLAEL 330
V + + L G+VK+ ++
Sbjct: 364 NV---ISFTALLEGYVKIGDM 381
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 102/261 (39%), Gaps = 42/261 (16%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC----VVNARQVFDKIL 135
L+ C + GR IH ++ ++ L+ Y + + + +AR++FD+I
Sbjct: 33 LQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEI- 91
Query: 136 ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
P R + F+W +L+ M+AK G + A
Sbjct: 92 ----------------------PLARR-NVFTW-----------NSLLSMFAKSGRLADA 117
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALD-LFEKMKDEVQPDHITFVGVLSACSRG 254
R +F ++ E+ VSW M+ G G +A+ L + D P T VLS+C+
Sbjct: 118 RGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVT 177
Query: 255 GLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGA 314
GR S V + V ++++ G G + A + +M V+ W A
Sbjct: 178 QAGAVGRK-VHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVR-SVSSWNA 235
Query: 315 LLNSCKLHGHVKLAELALEKL 335
+++ G + LAE E +
Sbjct: 236 MVSLNTHLGRMDLAESLFESM 256
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/530 (39%), Positives = 308/530 (58%), Gaps = 29/530 (5%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL------ 64
T ++ Y + A LFD +P+RN+ W +I YA NG +A +L+ +
Sbjct: 178 TAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEV 237
Query: 65 ---------LEIGLVPD-----NFTFPFALKACSALSAIEEGRRIHEDVIRNKWET---- 106
++ G V D N + AC+A+ + G+R D + +E
Sbjct: 238 SWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAM-MVGFGQRGMVDAAKTVFEKMCER 296
Query: 107 DVFVGAALIDMYAKCSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELH 164
D +A+I Y + ++ A F ++L R P+ +++++++ A +A L GRE+H
Sbjct: 297 DDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVH 356
Query: 165 GFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST 224
R F+++V +AL+ MY KCG + A+ +F K +V WN+MITGYA HG
Sbjct: 357 AAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGE 416
Query: 225 KALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
+AL +F M+ + PD IT++G L+ACS G EGR F SM + I P +HY+CM
Sbjct: 417 QALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCM 476
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDA 343
VDLLG SG ++EA DLI M V+PD +WGAL+ +C++H + ++AE A +KL+ELEP +A
Sbjct: 477 VDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNA 536
Query: 344 GNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDA-SHPNC 402
G YV+LS+IY WE +K+RK + R + KS CSWIE + H F SGD +HP
Sbjct: 537 GPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEH 596
Query: 403 DEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTR 462
I L+ L+G + E+GY V HD++ ++K++ + HSER A+A+GL+ P+G
Sbjct: 597 AAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMP 656
Query: 463 LLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ + KNL++C DCH AIK I+KIT REI +RD NR+HHFKDG CSC DYW
Sbjct: 657 IRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 142/323 (43%), Gaps = 20/323 (6%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y L +A +LF ++P+RN + VL+ G A L+ + + +V
Sbjct: 116 TSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVV 175
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
+ L I E R + +++ + +V A+I YA+ V AR++
Sbjct: 176 ----AWTAMLSGYCQAGRITEARALFDEMPKR----NVVSWTAMISGYAQNGEVNLARKL 227
Query: 131 FDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCG 190
F+ + ER+ E + ++ + EL H V A++ + + G
Sbjct: 228 FEVMPERN--EVSWTAMLVGYIQAGHVEDAAELFNAMPEH----PVAACNAMMVGFGQRG 281
Query: 191 LVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLS 249
+V A+ +FE++ E+ +W+AMI Y + +AL F +M V+P++ + + +L+
Sbjct: 282 MVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILT 341
Query: 250 ACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
C+ + D GR +M+R D V + ++ + G LD+A + K D
Sbjct: 342 VCAALAVLDYGREVHAAMLR-CSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPK-DI 399
Query: 310 GVWGALLNSCKLHGHVKLAELAL 332
+W +++ HG L E AL
Sbjct: 400 VMWNSMITGYAQHG---LGEQAL 419
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 148/378 (39%), Gaps = 78/378 (20%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL------ 64
++ HL A + + A F+ +P R +N L+ Y N + A+ L+ R+
Sbjct: 22 ARIAHLARAGN-IEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 65 ----LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
L GL T P A +AL++I + V +L+ Y +
Sbjct: 81 SYNALISGLSLRRQTLP---DAAAALASI-------------PFPPSVVSFTSLLRGYVR 124
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
+ +A ++F ++ ER N T
Sbjct: 125 HGLLADAIRLFQQMPER-------------------------------------NHVSYT 147
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPD 240
L+ G V AR LF+++ ++ VV+W AM++GY G T+A LF++M +
Sbjct: 148 VLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKR---N 204
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
+++ ++S ++ G + R FE M + +T M+ +G +++A +L
Sbjct: 205 VVSWTAMISGYAQNGEVNLARKLFEVMPERNEVS-----WTAMLVGYIQAGHVEDAAELF 259
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN-W 359
M P A++ G V A+ EK+ E D G + + Y +
Sbjct: 260 NAMPEHPVAAC-NAMMVGFGQRGMVDAAKTVFEKMCE---RDDGTWSAMIKAYEQNEFLM 315
Query: 360 EGVAKLRKLMIDRGIKKS 377
E ++ R+ M+ RG++ +
Sbjct: 316 EALSTFRE-MLWRGVRPN 332
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/547 (37%), Positives = 315/547 (57%), Gaps = 43/547 (7%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL T L+ Y+ + L A FD I ++ WN + AY + A+ L+ R+L
Sbjct: 256 VLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLE 315
Query: 68 GLVPDNFTFPFALKACSAL---SAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
G+ P TF AL AC+A +A G+RI + E D V A ++MYAKC +
Sbjct: 316 GVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSL 375
Query: 125 VNARQVFDKI--LERD----------------------------------PSEATLVTVI 148
+AR VF++I RD P++ T V V+
Sbjct: 376 ADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVL 435
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL--REKR 206
AS ++ QGRE+H + FE + ++ AL++MYAKCG + A+ +F++ ++
Sbjct: 436 DASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQED 495
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V++W +++ GYA +G + +AL LF M+ + V+P+HITF+ L+AC+ GG ++G
Sbjct: 496 VIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCELLS 555
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
M D+ I P+ +H++C+VDLLG GRLDEA + +++ + D W ALL++CK +
Sbjct: 556 GMTPDHGIVPASKHFSCIVDLLGRCGRLDEA-EKLLERTSQADVITWMALLDACKNSKEL 614
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+ E E++++L+P A +Y++L+++YA A W A +RK M+D+GI+ CS +EV
Sbjct: 615 ERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEV 674
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
+ H+F +GD SHP +EIY +L+ L +K AGYV T V HDV + K ++ HS
Sbjct: 675 NQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHS 734
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
E+LAIAFGL++TP G+ L + KNL++C DCH A K ISK+T R+I +RD +RYHHF G
Sbjct: 735 EKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGT 794
Query: 506 CSCGDYW 512
CSCGDYW
Sbjct: 795 CSCGDYW 801
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 134/296 (45%), Gaps = 47/296 (15%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIP---QRNLFLWNVLIRAYAWNGPYEVAIE 59
F + VL L+ +YS C L +A Q FDR+P +R++ WN +I A+ NG A++
Sbjct: 38 FEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQ 97
Query: 60 LYYRLLEIGLVPDN-FTFPFALKAC--SALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
L+ + G P N TF L +C + L ++E+ R IH ++ E + FV AL+D
Sbjct: 98 LFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVD 157
Query: 117 MYAKCSCVVNARQVFDKILERDPSEATL-------------------------------- 144
Y K + +A +VF + + +PS + +
Sbjct: 158 SYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKP 217
Query: 145 --VTVISASADIAALPQGRELHGFSWRHRFELNVKVK-----TALVDMYAKCGLVKVARN 197
VT++S + LP G F E+ + T L+ YA+ + AR
Sbjct: 218 SGVTLVSVLNACSMLPVGSAT-AFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARA 276
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACS 252
F+ ++ VVSWNAM Y H +AL LFE+M E V+P TF+ L+AC+
Sbjct: 277 TFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACA 332
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 92/180 (51%), Gaps = 18/180 (10%)
Query: 135 LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV 194
+E P+ L+ +++A + + L GR +H FE N + AL+ MY+KCG +
Sbjct: 1 MEVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLID 60
Query: 195 ARNLFEQL---REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLS 249
A+ F++L ++ VV+WNAMI+ + +G + +AL LF M + P+ +TFV VL
Sbjct: 61 AKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLD 120
Query: 250 ACSRGGLFD-------EGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
+C GL GR+ + R+ + T +VD G G LD+A ++ ++
Sbjct: 121 SCVEAGLLSLEDVRAIHGRIVGAGIEREAFV------RTALVDSYGKLGSLDDAWEVFLR 174
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 44/217 (20%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI----- 134
+ ACS L + GRRIH + +E + +G ALI MY+KC +++A+Q FD++
Sbjct: 14 VNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASK 73
Query: 135 ------------------------LERD--------PSEATLVTVISA--SADIAALPQG 160
L RD P+ T V+V+ + A + +L
Sbjct: 74 RDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDV 133
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF----EQLREKRVVSWNAMITG 216
R +HG E V+TALVD Y K G + A +F ++ +V+ +AMI+
Sbjct: 134 RAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISA 193
Query: 217 YAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACS 252
+G ++L LF M E +P +T V VL+ACS
Sbjct: 194 CWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACS 230
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/572 (36%), Positives = 326/572 (56%), Gaps = 82/572 (14%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYE--VAIELYYRLLEIGLV-PDNFTFPFA 79
L AH++F+++PQRN F WN +IR ++ + + +AI L+Y ++ V P+ FTFP
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 80 LKACSALSAIEEGRRIH-----------------------------------------ED 98
LKAC+ I+EG++IH +D
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 99 VI----RNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---------------- 138
++ R K + ++ + +ID Y + AR +FDK+ +R
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 139 -----------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
P+ TLV+V+ A + + +L G LH ++ ++ + +A
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPD 240
L+DMY+KCG+++ A ++FE+L + V++W+AMI G+A+HG + A+D F KM+ V+P
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 374
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
+ ++ +L+ACS GGL +EGR +F MV ++P ++HY CMVDLLG SG LDEA + I
Sbjct: 375 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI 434
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
+ M +KPD +W ALL +C++ G+V++ + L+++ PHD+G YV LSN+YA NW
Sbjct: 435 LNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWS 494
Query: 361 GVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAG 420
V+++R M ++ I+K CS I++ H F+ D SHP EI + L + +++ AG
Sbjct: 495 EVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAG 554
Query: 421 YVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIK 480
Y P T V ++E ++K N++ HSE++A AFGLI+T G + I KNL+IC+DCH +IK
Sbjct: 555 YRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIK 614
Query: 481 FISKITEREITVRDVNRYHHFKDGICSCGDYW 512
ISK+ +R+ITVRD R+HHF+DG CSC DYW
Sbjct: 615 LISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/556 (36%), Positives = 308/556 (55%), Gaps = 69/556 (12%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-EIGLVPDNFTFPFALKACS 84
A LF+ +P R++ WN +I Y NG A++L+ R+L E + PD FT L AC+
Sbjct: 143 AESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACA 202
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN------------------ 126
L + G+++H ++R + + V ALI YAK V N
Sbjct: 203 NLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISF 262
Query: 127 ---------------ARQVFDKILERD--------------------------------- 138
AR++F + RD
Sbjct: 263 TALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPE 322
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P+ TL V+S A +A L G+++H + R E + V A++ MYA+ G AR +
Sbjct: 323 PNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRM 382
Query: 199 FEQL-REKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGL 256
F+Q+ K ++W +MI A HG +A+ LFE+M + V+PD IT+VGVLSACS G
Sbjct: 383 FDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGF 442
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
+EG+ +++ + ++ I P + HY CMVDLL +G EA + I +M V+PD WG+LL
Sbjct: 443 VNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLL 502
Query: 317 NSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKK 376
++C++H + +LAELA EKL+ ++P+++G Y ++N+Y+ W A++ K ++ ++K
Sbjct: 503 SACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRK 562
Query: 377 SIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDE 436
SW +++K H F + D HP D +YA + +K AG+VP +SV HDV+++
Sbjct: 563 ETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDEL 622
Query: 437 KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVN 496
K ++ HSE+LAIAFGLI+TP+ T L + KNL++C+DCH AIK ISK+T+REI VRD
Sbjct: 623 KEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDAT 682
Query: 497 RYHHFKDGICSCGDYW 512
R+HHF+DG+CSC DYW
Sbjct: 683 RFHHFRDGLCSCKDYW 698
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 158/375 (42%), Gaps = 71/375 (18%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRN----------------------- 37
+G G +A ++++Y C A +F+R+P R+
Sbjct: 87 LGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESL 146
Query: 38 --------LFLWNVLIRAYAWNGPYEVAIELYYRLL-EIGLVPDNFTFPFALKACSALSA 88
+ WN +I Y NG A++L+ R+L E + PD FT L AC+ L
Sbjct: 147 FESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGN 206
Query: 89 IEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVI 148
+ G+++H ++R + + V ALI YAK V NAR++ D+ +E D
Sbjct: 207 VRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETD---------- 256
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
LNV TAL++ Y K G ++ AR +F + + VV
Sbjct: 257 -------------------------LNVISFTALLEGYVKIGDMESAREMFGVMNNRDVV 291
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W AMI GY +G + +A+DLF M +P+ T VLS C+ D G+
Sbjct: 292 AWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRA 351
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+R ++ S ++ + SG A + Q+ + + W +++ + HG +
Sbjct: 352 IRSL-LEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEE 410
Query: 328 AELALEKLIE--LEP 340
A E+++ +EP
Sbjct: 411 AVGLFEEMLRAGVEP 425
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 138/317 (43%), Gaps = 44/317 (13%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFT 75
+++ L +A +F +P+R+ W V++ G + AI+ + G P FT
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL 135
L +C+ A GR++H V++ + V V ++++MY KC A VF+++
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 136 ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
R S SW A+V + G + +A
Sbjct: 121 VRSVS--------------------------SW-----------NAMVSLNTHLGRMDLA 143
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSR 253
+LFE + ++ +VSWNAMI GY +G KAL LF +M + + PD T VLSAC+
Sbjct: 144 ESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACAN 203
Query: 254 GGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWG 313
G G+ ++R + + Q ++ SG ++ A IM ++ D V
Sbjct: 204 LGNVRIGKQVHAYILRT-EMAYNSQVTNALISTYAKSGSVENA-RRIMDQSMETDLNV-- 259
Query: 314 ALLNSCKLHGHVKLAEL 330
+ + L G+VK+ ++
Sbjct: 260 -ISFTALLEGYVKIGDM 275
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 3/152 (1%)
Query: 185 MYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALD-LFEKMKDEVQPDHIT 243
M+AK G + AR +F ++ E+ VSW M+ G G +A+ L + D P T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
VLS+C+ GR S V + V ++++ G G + A + +M
Sbjct: 61 LTNVLSSCAVTQAGAVGRK-VHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERM 119
Query: 304 RVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
V+ W A+++ G + LAE E +
Sbjct: 120 PVR-SVSSWNAMVSLNTHLGRMDLAESLFESM 150
>gi|224123200|ref|XP_002330363.1| predicted protein [Populus trichocarpa]
gi|222871567|gb|EEF08698.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/525 (40%), Positives = 296/525 (56%), Gaps = 38/525 (7%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
AH LFD + + N+ W L+ Y G + A+ LY ++ E + P+ FT + +CS
Sbjct: 60 AHHLFDEMHEPNVVSWTSLMSGYVNMGRPQSALWLYTKMSESEVSPNGFTLATVINSCSI 119
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
L+ ++ G+ +H V + ++ V ++L+DMY KC+ V AR VFD + R+
Sbjct: 120 LADLKTGKMVHAHVQILGLQGNLVVCSSLVDMYGKCNDVDGARMVFDSMSCRNVVSWTAM 179
Query: 139 ---------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHR 171
P+ L +VI+A A + L G+ HG R
Sbjct: 180 IAGYAQNGKGYEALEVFREFSSYMMERPNHFMLASVINACASLGRLVSGKVTHGAVIRGG 239
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
+ELN V +ALVDMYAKCG + +F ++R V+ + +MI G A +G +L+LFE
Sbjct: 240 YELNDVVASALVDMYAKCGSFLYSEKVFRRIRNPSVIPYTSMIVGAAKYGLGKLSLNLFE 299
Query: 232 KMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+M D +V P+ +TFVG+L ACS GL DEG SM + + P V+HYTC+VD+L
Sbjct: 300 EMTDRKVMPNDVTFVGILHACSHSGLVDEGLRLLNSMHEKHGVMPDVRHYTCVVDMLSRV 359
Query: 291 GRLDEACDLIMQMRVKPDPG--VWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
GRLDEA L +RV P+ G +WG LL+S +LHG V +A A + LIE AG YV
Sbjct: 360 GRLDEAYKLAKSIRVNPNEGALLWGTLLSSSRLHGRVDMAVEASKWLIEYNQQVAGAYVT 419
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAK 408
LSN Y A WE LR M G+ K CSWIE+K+ + F +GD S DE+ +
Sbjct: 420 LSNTYTLAGEWENAHSLRTEMELVGVHKEPGCSWIEIKDSIYVFYAGDLSCERGDEVISL 479
Query: 409 LKWLEGRMKEAGYVPGTES-VFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITK 467
L+ LE RM E G V G+ VF DVE + K ++ HSERLA+AFGLI+ P G + + K
Sbjct: 480 LRELERRMMERGCVGGSTGLVFVDVEQEVKEKIVGLHSERLALAFGLISIPKGVTIRVMK 539
Query: 468 NLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
NL+IC DCH A K ISKI ER+ VRDVNR+HHFKDG C+C D+W
Sbjct: 540 NLRICSDCHEAFKLISKIVERDFVVRDVNRFHHFKDGSCTCKDFW 584
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 81/156 (51%), Gaps = 10/156 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ + V+A+ LV +Y+ C + ++F RI ++ + +I A G ++++ L+
Sbjct: 239 GYELNDVVASALVDMYAKCGSFLYSEKVFRRIRNPSVIPYTSMIVGAAKYGLGKLSLNLF 298
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRI----HEDVIRNKWETDVFVGAALIDM 117
+ + ++P++ TF L ACS ++EG R+ HE ++ DV ++DM
Sbjct: 299 EEMTDRKVMPNDVTFVGILHACSHSGLVDEGLRLLNSMHE---KHGVMPDVRHYTCVVDM 355
Query: 118 YAKCSCVVNARQVFDKILERDPSEATLV--TVISAS 151
++ + A ++ K + +P+E L+ T++S+S
Sbjct: 356 LSRVGRLDEAYKL-AKSIRVNPNEGALLWGTLLSSS 390
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/567 (37%), Positives = 307/567 (54%), Gaps = 69/567 (12%)
Query: 12 KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
+L Y+A D L L P + I A++ G + A+ L +L GL+P
Sbjct: 72 RLQRAYAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIP 131
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA------------ 119
+ T +L AC L+ GR +H + D +V AL+ MYA
Sbjct: 132 TSHTLSSSLPACHGLAL---GRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALF 188
Query: 120 -------------------KCSCVVNARQVFDKILERD---------------------- 138
K + +AR++FD + +D
Sbjct: 189 DEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALR 248
Query: 139 -----------PSEATLVTVISASADIAALPQGRELHGF-SWRHRFELNVKVKTALVDMY 186
P E ++ +SA A + GR LH + R +LN +V TAL+DMY
Sbjct: 249 LFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMY 308
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFV 245
KCG ++ A ++F + +K +V WNAMI GYAMHG S KAL++F +++ + + P ITF+
Sbjct: 309 CKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFI 368
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
G+L+ACS GL DEG FF+SM +Y I P ++HY CMVDLLG +G ++EA L+ M +
Sbjct: 369 GLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTI 428
Query: 306 KPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKL 365
PD +W +LL +C+LH ++ L + + L+ ++G Y++LSNIYA NWE VA++
Sbjct: 429 APDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARV 488
Query: 366 RKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGT 425
R +M GI+K CS IEV K + F++GD SHP DEIYA L+ + G +KE G+VP T
Sbjct: 489 RSMMKASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQT 548
Query: 426 ESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKI 485
E V HD++ K + HSE+LA+AFGLI+T G + I KNL+ C DCH +K ISKI
Sbjct: 549 ELVLHDLDEVTKEKALAVHSEKLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKI 608
Query: 486 TEREITVRDVNRYHHFKDGICSCGDYW 512
T R+I RD NR+HHF DG C+CGDYW
Sbjct: 609 TGRKIVFRDRNRFHHFVDGSCTCGDYW 635
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T L+ +Y C L +A +F+ I +++ +WN +I YA +G A+E++ +L G
Sbjct: 300 VGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQG 359
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDV 99
L P + TF L ACS ++EG + + +
Sbjct: 360 LWPTDITFIGLLNACSHSGLVDEGHQFFQSM 390
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/567 (37%), Positives = 307/567 (54%), Gaps = 69/567 (12%)
Query: 12 KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
+L Y+A D L L P + I A++ G + A+ L +L GL+P
Sbjct: 71 RLQRAYAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIP 130
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA------------ 119
+ T +L AC L+ GR +H + D +V AL+ MYA
Sbjct: 131 TSHTLSSSLPACHGLAL---GRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALF 187
Query: 120 -------------------KCSCVVNARQVFDKILERD---------------------- 138
K + +AR++FD + +D
Sbjct: 188 DEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALR 247
Query: 139 -----------PSEATLVTVISASADIAALPQGRELHGF-SWRHRFELNVKVKTALVDMY 186
P E ++ +SA A + GR LH + R +LN +V TAL+DMY
Sbjct: 248 LFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMY 307
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFV 245
KCG ++ A ++F + +K +V WNAMI GYAMHG S KAL++F +++ + + P ITF+
Sbjct: 308 CKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFI 367
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
G+L+ACS GL DEG FF+SM +Y I P ++HY CMVDLLG +G ++EA L+ M +
Sbjct: 368 GLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTI 427
Query: 306 KPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKL 365
PD +W +LL +C+LH ++ L + + L+ ++G Y++LSNIYA NWE VA++
Sbjct: 428 APDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARV 487
Query: 366 RKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGT 425
R +M GI+K CS IEV K + F++GD SHP DEIYA L+ + G +KE G+VP T
Sbjct: 488 RSMMKASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQT 547
Query: 426 ESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKI 485
E V HD++ K + HSE+LA+AFGLI+T G + I KNL+ C DCH +K ISKI
Sbjct: 548 ELVLHDLDEVTKEKALAVHSEKLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKI 607
Query: 486 TEREITVRDVNRYHHFKDGICSCGDYW 512
T R+I RD NR+HHF DG C+CGDYW
Sbjct: 608 TGRKIVFRDRNRFHHFVDGSCTCGDYW 634
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T L+ +Y C L +A +F+ I +++ +WN +I YA +G A+E++ +L G
Sbjct: 299 VGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQG 358
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDV 99
L P + TF L ACS ++EG + + +
Sbjct: 359 LWPTDITFIGLLNACSHSGLVDEGHQFFQSM 389
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/522 (40%), Positives = 306/522 (58%), Gaps = 38/522 (7%)
Query: 27 HQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV-PDNFTFPFALKACSA 85
LFD+IP F +N LIRA G A+ +Y R+L G P++FT FALKAC+A
Sbjct: 80 RNLFDQIPDPTAFCYNSLIRALPAAGSAP-ALAVYRRMLRAGSPRPNSFTLAFALKACAA 138
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD------------- 132
+ A EGR++H +R T +V L+++YAKC V AR VFD
Sbjct: 139 VPAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWSA 198
Query: 133 ---------------------KILERDPSEATLVTVISASADIAALPQGRELHGFSWRHR 171
+ + +P E T+V+VISA A AL G+ +H + R
Sbjct: 199 MVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKG 258
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
+++++ TAL+DMYAKCGL++ AR +F+ + EK +W+AMI G+A+HG AL LF
Sbjct: 259 ITVDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFS 318
Query: 232 KMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+M + +V+P+++TF+GVLSAC+ GL ++GR ++ S++++ I PS+++Y CMVDLL S
Sbjct: 319 RMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYW-SIMQNLGIKPSMENYGCMVDLLCRS 377
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
G LD+A ++ M V P+ +W LL +CK + +AE A ++L+ELEPH+ NYV+LS
Sbjct: 378 GLLDDAYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLS 437
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
N+YA + W+ V+ LR+ M + + S IE+ H F+ D SHP EI L+
Sbjct: 438 NLYASNSQWDRVSYLRRKMKGKNVTAIAGRSSIEINGHLHEFVVSDDSHPEIREIRLVLR 497
Query: 411 WLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLK 470
+ R++ AG+ P T +V HDV +EK +C HSERLAIA+GL+ T + + KNL+
Sbjct: 498 EMADRVRRAGHKPWTAAVLHDVGEEEKEAALCQHSERLAIAYGLLKTRAPHVIRVVKNLR 557
Query: 471 ICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
C DCH K ISK REI VRD R+H F G CSC D+W
Sbjct: 558 FCLDCHEVAKIISKAYNREIVVRDRVRFHKFMGGSCSCKDFW 599
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/556 (36%), Positives = 308/556 (55%), Gaps = 69/556 (12%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-EIGLVPDNFTFPFALKACS 84
A LF+ +P R++ WN +I Y NG A++L+ R+L E + PD FT L AC+
Sbjct: 249 AESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACA 308
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN------------------ 126
L + G+++H ++R + + V ALI YAK V N
Sbjct: 309 NLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISF 368
Query: 127 ---------------ARQVFDKILERD--------------------------------- 138
AR++F + RD
Sbjct: 369 TALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPE 428
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P+ TL V+S A +A L G+++H + R E + V A++ MYA+ G AR +
Sbjct: 429 PNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRM 488
Query: 199 FEQL-REKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGL 256
F+Q+ K ++W +MI A HG +A+ LFE+M + V+PD IT+VGVLSACS G
Sbjct: 489 FDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGF 548
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
+EG+ +++ + ++ I P + HY CMVDLL +G EA + I +M V+PD WG+LL
Sbjct: 549 VNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLL 608
Query: 317 NSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKK 376
++C++H + +LAELA EKL+ ++P+++G Y ++N+Y+ W A++ K ++ ++K
Sbjct: 609 SACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRK 668
Query: 377 SIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDE 436
SW +++K H F + D HP D +YA + +K AG+VP +SV HDV+++
Sbjct: 669 ETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDEL 728
Query: 437 KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVN 496
K ++ HSE+LAIAFGLI+TP+ T L + KNL++C+DCH AIK ISK+T+REI VRD
Sbjct: 729 KEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDAT 788
Query: 497 RYHHFKDGICSCGDYW 512
R+HHF+DG+CSC DYW
Sbjct: 789 RFHHFRDGLCSCKDYW 804
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 158/375 (42%), Gaps = 71/375 (18%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRN----------------------- 37
+G G +A ++++Y C A +F+R+P R+
Sbjct: 193 LGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESL 252
Query: 38 --------LFLWNVLIRAYAWNGPYEVAIELYYRLL-EIGLVPDNFTFPFALKACSALSA 88
+ WN +I Y NG A++L+ R+L E + PD FT L AC+ L
Sbjct: 253 FESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGN 312
Query: 89 IEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVI 148
+ G+++H ++R + + V ALI YAK V NAR++ D+ +E D
Sbjct: 313 VRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETD---------- 362
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
LNV TAL++ Y K G ++ AR +F + + VV
Sbjct: 363 -------------------------LNVISFTALLEGYVKIGDMESAREMFGVMNNRDVV 397
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W AMI GY +G + +A+DLF M +P+ T VLS C+ D G+
Sbjct: 398 AWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRA 457
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+R ++ S ++ + SG A + Q+ + + W +++ + HG +
Sbjct: 458 IRSL-LEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEE 516
Query: 328 AELALEKLIE--LEP 340
A E+++ +EP
Sbjct: 517 AVGLFEEMLRAGVEP 531
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 140/321 (43%), Gaps = 44/321 (13%)
Query: 12 KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
L+ +++ L +A +F +P+R+ W V++ G + AI+ + G P
Sbjct: 103 SLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTP 162
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
FT L +C+ A GR++H V++ + V V ++++MY KC A VF
Sbjct: 163 TQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVF 222
Query: 132 DKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGL 191
+++ R S SW A+V + G
Sbjct: 223 ERMPVRSVS--------------------------SW-----------NAMVSLNTHLGR 245
Query: 192 VKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLS 249
+ +A +LFE + ++ +VSWNAMI GY +G KAL LF +M + + PD T VLS
Sbjct: 246 MDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLS 305
Query: 250 ACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
AC+ G G+ ++R + + Q ++ SG ++ A IM ++ D
Sbjct: 306 ACANLGNVRIGKQVHAYILRT-EMAYNSQVTNALISTYAKSGSVENA-RRIMDQSMETDL 363
Query: 310 GVWGALLNSCKLHGHVKLAEL 330
V + + L G+VK+ ++
Sbjct: 364 NV---ISFTALLEGYVKIGDM 381
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 3/162 (1%)
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALD-LFEKM 233
NV +L+ M+AK G + AR +F ++ E+ VSW M+ G G +A+ L +
Sbjct: 97 NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156
Query: 234 KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
D P T VLS+C+ GR S V + V ++++ G G
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAVGRK-VHSFVVKLGLGSCVPVANSVLNMYGKCGDS 215
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+ A + +M V+ W A+++ G + LAE E +
Sbjct: 216 ETATTVFERMPVR-SVSSWNAMVSLNTHLGRMDLAESLFESM 256
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/569 (37%), Positives = 312/569 (54%), Gaps = 69/569 (12%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG-LVP 71
+V LY+ + A +F+ + +R++ WN +I Y NG +A++ + R+L + P
Sbjct: 419 MVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEP 478
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV------- 124
D FT L AC+ L ++ G+++H ++R + ALI YAK V
Sbjct: 479 DAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIM 538
Query: 125 --------------------------VNARQVFDKILERD-------------------- 138
AR++FD + RD
Sbjct: 539 DQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEA 598
Query: 139 -------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
P+ TL V+SA A +A L G+++H + R E +V V A++ +
Sbjct: 599 MELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITV 658
Query: 186 YAKCGLVKVARNLFEQL-REKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHIT 243
YA+ G V +AR +F+Q+ K ++W +MI A HG +A+ LFE+M + V+PDHIT
Sbjct: 659 YARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHIT 718
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
+VGVLSAC+ G D+G+ ++E M ++ I P + HY CMVDL +G L EA + I +M
Sbjct: 719 YVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRM 778
Query: 304 RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVA 363
V PD VWG+LL +C++ + LAELA KL+ ++PH++G Y L+N+Y+ W A
Sbjct: 779 PVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAA 838
Query: 364 KLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVP 423
++ KL D+G+KK SW V+ K H F + D HP D IY K + +K+AG+VP
Sbjct: 839 RIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIYRKAAEMWEEIKKAGFVP 898
Query: 424 GTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFIS 483
SV HDV+++ K ++ HSE+LAIAFGLI+TP+ T L I KNL++C+DCH AIKFIS
Sbjct: 899 DLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFIS 958
Query: 484 KITEREITVRDVNRYHHFKDGICSCGDYW 512
K +REI VRD R+HHF+DG CSC DYW
Sbjct: 959 KFVDREIIVRDATRFHHFRDGYCSCKDYW 987
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 153/363 (42%), Gaps = 69/363 (19%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A ++++Y C A +F+R+ R++ WNV++ Y G E+A+ ++ ++E
Sbjct: 384 VANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERS 443
Query: 69 LV--------------------------------PDNFTFPFALKACSALSAIEEGRRIH 96
+V PD FT L AC+ L ++ G+++H
Sbjct: 444 IVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMH 503
Query: 97 EDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAA 156
++R + ALI YAK V AR++ D+ + D
Sbjct: 504 SYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVAD------------------ 545
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
LNV TAL++ Y K G K AR +F+ + + V++W AMI G
Sbjct: 546 -----------------LNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVG 588
Query: 217 YAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
Y +G + +A++LF M +P+ T VLSAC+ D G+ +R +
Sbjct: 589 YHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQ-EQ 647
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
SV ++ + SG + A + Q+ + + W +++ + HG + A + E++
Sbjct: 648 SVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEM 707
Query: 336 IEL 338
+ +
Sbjct: 708 VRV 710
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 141/320 (44%), Gaps = 44/320 (13%)
Query: 12 KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
L+ LY+ L +AH +F +P R+ W ++I +G + A++ + ++ G P
Sbjct: 286 SLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAP 345
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
FT L +C+A+ A GR++H V++ + V V +++ MY KC AR VF
Sbjct: 346 SQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVF 405
Query: 132 DKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGL 191
+++ R S SW +V +Y G
Sbjct: 406 ERMQVRSVS--------------------------SW-----------NVMVSLYTHQGR 428
Query: 192 VKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLS 249
+++A ++FE + E+ +VSWN +I GY +G AL F +M ++PD T VLS
Sbjct: 429 MELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLS 488
Query: 250 ACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
AC+ + G+ ++R + S Q ++ SG ++ A IM V D
Sbjct: 489 ACANLRMLKMGKQMHSYILRT-GMPCSSQIMNALISTYAKSGSVETA-RRIMDQAVVADL 546
Query: 310 GVWGALLNSCKLHGHVKLAE 329
V + + L G+VKL +
Sbjct: 547 NV---ISFTALLEGYVKLGD 563
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 110/256 (42%), Gaps = 42/256 (16%)
Query: 22 CLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFA 79
C A LFD IP +RN F WN L+ YA +G A ++ + PD +
Sbjct: 263 CFREARCLFDDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEM------PDRDAVSWT 316
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP 139
+ + + R + V +DM ++ P
Sbjct: 317 I----MIVGLNRSGRFWDAV------------KTFLDMVSEGFA---------------P 345
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF 199
S+ TL V+S+ A + A GR++H F + V V +++ MY KCG + AR +F
Sbjct: 346 SQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVF 405
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDE 259
E+++ + V SWN M++ Y G A+ +FE M V+ +++ +++ ++ GL
Sbjct: 406 ERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENM---VERSIVSWNTIIAGYNQNGLDGM 462
Query: 260 GRMFFESMVRDYHIDP 275
FF M+ ++P
Sbjct: 463 ALKFFSRMLSASSMEP 478
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 97/263 (36%), Gaps = 42/263 (15%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS----CVVNARQVFDKIL 135
L+ C GR IH ++ ++ L+ YA C AR +FD I
Sbjct: 216 LQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDI- 274
Query: 136 ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
P R + F+W +L+ +YAK G + A
Sbjct: 275 ----------------------PYARR-NAFTW-----------NSLLSLYAKSGRLPDA 300
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRG 254
+F ++ ++ VSW MI G G A+ F M E P T VLS+C+
Sbjct: 301 HVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAM 360
Query: 255 GLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGA 314
GR +V+ + V ++ + G G + A + +M+V+ W
Sbjct: 361 EACGVGRKVHPFVVK-LGLSSCVPVANSVLYMYGKCGDAETARAVFERMQVR-SVSSWNV 418
Query: 315 LLNSCKLHGHVKLAELALEKLIE 337
+++ G ++LA E ++E
Sbjct: 419 MVSLYTHQGRMELAVSMFENMVE 441
>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/545 (37%), Positives = 308/545 (56%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF F + +++ ++ C + +A +LFD +P+RNL WN +I G + A L+
Sbjct: 5 GFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLF 64
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ E +FTF ++A + L I GR++H ++ D+FV ALIDMY+KC
Sbjct: 65 LNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKC 124
Query: 122 SCVVNARQVFDKILERD----------------PSEA-----------------TLVTVI 148
+ +AR VF+++ E+ EA T ++
Sbjct: 125 GSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIV 184
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A +A++ ++ H RH F ++ TALVD Y+K G ++ AR++F+++ K V+
Sbjct: 185 RICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVI 244
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNA+I GY HG ++A++LFE+M ++ + P+HITF+ VLSACS GL + G F+SM
Sbjct: 245 SWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSM 304
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
RD I P HY CM++L+G G LDEA LI KP +W ALL +C+++ + +L
Sbjct: 305 GRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNENFEL 364
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
+ A EKL +EP NY++L NIY A N + A + + +G++ CSWIEVK
Sbjct: 365 GKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCSWIEVKR 424
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ H FLSGD HP EIY K+ L + + GYVP +++ DV+ E+ + HSE+
Sbjct: 425 RPHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDVDEQEE-RVRLYHSEK 483
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGLI+TP L I + +IC DCH AIK I+++T REI +RD R+HHFK G CS
Sbjct: 484 LAIAFGLISTPYWAPLQIVQGHRICGDCHEAIKLIARVTGREIVIRDAGRFHHFKHGHCS 543
Query: 508 CGDYW 512
C DYW
Sbjct: 544 CEDYW 548
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 142/288 (49%), Gaps = 38/288 (13%)
Query: 99 VIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER--------------------- 137
+I N +E D ++ ++ M+ KC +++AR++FD++ ER
Sbjct: 1 MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60
Query: 138 ------------DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
D T +I ASA + + GR+LH + + ++ V AL+DM
Sbjct: 61 FRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDM 120
Query: 186 YAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITF 244
Y+KCG ++ AR +FE++ EK V WN +I GYA+HG+S +ALD++ +M+D V+ DH TF
Sbjct: 121 YSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTF 180
Query: 245 VGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
++ C+R + + +++R + + T +VD GR+++A + +M
Sbjct: 181 SMIVRICARLASVEHAKQAHAALIR-HGFGSDIVANTALVDFYSKWGRIEDARHVFDKMA 239
Query: 305 VKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHDAGNYVILS 350
K + W AL+ HG A E++I+ + P+ +LS
Sbjct: 240 SK-NVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLS 286
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/528 (39%), Positives = 302/528 (57%), Gaps = 38/528 (7%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL--EIGLVPDNFTFPFAL 80
L AH + + + +N F N +IRAY+ A+ L+ +L PD FT+PF L
Sbjct: 44 LTYAHLILNSLSTQNSFFHNTMIRAYSQTPDPTQALHLFLSMLCQPTSPRPDKFTYPFLL 103
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD-- 138
K+C+ L G+++H + ++ E+D +V LI MY+ C A +VF K+ +RD
Sbjct: 104 KSCARLKQPRVGKQLHGLIYKSGLESDRYVSNGLIHMYSSCGKSGRAYKVFGKMRDRDVV 163
Query: 139 -------------------------------PSEATLVTVISASADIAALPQGRELHGFS 167
P+EAT+V+V+ A AD A+ GR + G
Sbjct: 164 SWTSMIDGFVDDDRALEAIRLFEEMVEDGVEPNEATVVSVLRACADAGAVGMGRRVQGVI 223
Query: 168 WRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKAL 227
+ L V+TAL+DMYAKCG + AR +F+ + K V +W AMI+G A HG +A+
Sbjct: 224 EERKIGLEANVRTALIDMYAKCGSIGSARKVFDGIVNKDVFAWTAMISGLANHGLCEEAV 283
Query: 228 DLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDL 286
LF++M+ ++PD T VLSAC G F EG +F SM Y I P++QHY CMVDL
Sbjct: 284 TLFDQMESFGLRPDERTMTAVLSACRNAGWFSEGFAYFNSMWCKYGIKPTIQHYGCMVDL 343
Query: 287 LGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK--LIELEPHDAG 344
L +G LDEA + I +M ++PD +W L+ + K+HG + +E ++ L++++ D G
Sbjct: 344 LARTGHLDEAEEFIRKMPIEPDVVLWRTLIWASKVHGDIDRSEQLMKDRGLLKMDSDDCG 403
Query: 345 NYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDE 404
+YV+L N+YA A W AK+R+LM +G+ K CS IEV H F +GD+ H ++
Sbjct: 404 SYVLLGNVYASAGKWHDKAKMRELMNQKGLSKPPGCSRIEVDGLVHEFAAGDSGHIEAEK 463
Query: 405 IYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLL 464
IYAKL +E R+K GY P V +++N EKA + HSE+LA+AFGLI T GT +
Sbjct: 464 IYAKLDEVEERLKAEGYHPKLSEVLLEIDNKEKAFQLRHHSEKLAVAFGLIKTSPGTEIR 523
Query: 465 ITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I KNL+ C+DCH +K ISKI +++I VRD R+HHF +G CSC DYW
Sbjct: 524 IVKNLRSCEDCHSVLKLISKIYQQDIIVRDRIRFHHFINGDCSCKDYW 571
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
G + T L+ +Y+ C + +A ++FD I +++F W +I A +G E A+ L+
Sbjct: 228 IGLEANVRTALIDMYAKCGSIGSARKVFDGIVNKDVFAWTAMISGLANHGLCEEAVTLFD 287
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEG 92
++ GL PD T L AC EG
Sbjct: 288 QMESFGLRPDERTMTAVLSACRNAGWFSEG 317
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/556 (37%), Positives = 311/556 (55%), Gaps = 69/556 (12%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY-YRLLEIGLVPDNFTFPFALKACS 84
A LFD++ ++ WN +I Y G A+E + + L L PD FT L AC+
Sbjct: 230 ALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACA 289
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV--------------VN---- 126
+++ G++IH ++R + VG ALI MYAK V +N
Sbjct: 290 NRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAF 349
Query: 127 ---------------ARQVFDKILERD--------------------------------- 138
AR +FD + RD
Sbjct: 350 TSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPK 409
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P+ TL V+S + +A+L G++LH + R +V V AL+ MY++ G +K AR +
Sbjct: 410 PNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKI 469
Query: 199 FEQLREKR-VVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGL 256
F + R ++W +MI A HG +A++LFEKM + ++PDHIT+VGVLSAC+ GL
Sbjct: 470 FNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGL 529
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
++G+ +F M ++I+P+ HY CM+DLLG +G L+EA + I M ++PD WG+LL
Sbjct: 530 VEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLL 589
Query: 317 NSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKK 376
+SC++H +V LA++A EKL+ ++P+++G Y+ L+N + WE AK+RK M D+ +KK
Sbjct: 590 SSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKK 649
Query: 377 SIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDE 436
SW+++KNK H F DA HP D IY + + +K+ G++P T SV HD+E +
Sbjct: 650 EQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQEV 709
Query: 437 KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVN 496
K ++ HSE+LAIAF LINTP T + I KNL++C+DCH AI++IS + EREI VRD
Sbjct: 710 KEQILRHHSEKLAIAFALINTPKHTTVRIMKNLRVCNDCHSAIRYISLLVEREIIVRDAT 769
Query: 497 RYHHFKDGICSCGDYW 512
R+HHFKDG CSC DYW
Sbjct: 770 RFHHFKDGSCSCQDYW 785
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 162/358 (45%), Gaps = 48/358 (13%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L +A ++FD IPQ + W +I Y G ++ A+ + R++ G+ P FTF L +
Sbjct: 95 LDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLAS 154
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEA 142
C+A A++ G+++H V++ V V +L++MYAKC V A+ VFD++ +D S
Sbjct: 155 CAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTS-- 212
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
+W ++ M+ + +A LF+Q+
Sbjct: 213 ------------------------TW-----------NTMISMHMQFCQFDLALALFDQM 237
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEG 260
+ +VSWN++ITGY G+ +AL+ F M ++PD T VLSAC+ G
Sbjct: 238 TDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLG 297
Query: 261 RMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC 319
+ +VR D I +V + ++ + SG + E I+++ P V + +
Sbjct: 298 KQIHAHIVRADVDIAGAVGN--ALISMYAKSGAV-EVAHRIVEITGTPSLNV---IAFTS 351
Query: 320 KLHGHVKLAELALEKLI--ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIK 375
L G+ K+ ++ + I L+ D + + YA+ L +LMI G K
Sbjct: 352 LLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPK 409
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 122/283 (43%), Gaps = 41/283 (14%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y + A +FD + R++ W +I YA NG A+ L+ ++ G
Sbjct: 350 TSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPK 409
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
P+N+T L S+L++++ G+++H IR + + V VG ALI MY++ + +AR++
Sbjct: 410 PNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKI 469
Query: 131 FDKILE-RD---------------------------------PSEATLVTVISASADIAA 156
F+ I RD P T V V+SA +
Sbjct: 470 FNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGL 529
Query: 157 LPQGRELHGFSWR-HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-EKRVVSWNAMI 214
+ QG+ H E ++D+ + GL++ A N + E VV+W +++
Sbjct: 530 VEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLL 589
Query: 215 TGYAMHGHSTKALDLFEKMKDEVQPD----HITFVGVLSACSR 253
+ +H + A EK+ + P+ ++ LSAC +
Sbjct: 590 SSCRVHKYVDLAKVAAEKLL-LIDPNNSGAYLALANTLSACGK 631
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/547 (37%), Positives = 315/547 (57%), Gaps = 43/547 (7%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL T L+ Y+ + L A FD I ++ WN + AY + A+ L+ R+L
Sbjct: 390 VLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLE 449
Query: 68 GLVPDNFTFPFALKACSAL---SAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
G+ P TF AL AC+A +A G+RI + E D V A ++MYAKC +
Sbjct: 450 GVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSL 509
Query: 125 VNARQVFDKI--LERD----------------------------------PSEATLVTVI 148
+AR VF++I RD P++ T V V+
Sbjct: 510 ADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVL 569
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL--REKR 206
AS ++ QGRE+H + FE + ++ AL++MYAKCG + A+ +F++ ++
Sbjct: 570 DASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQED 629
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V++W ++I GYA +G + +AL LF M+ + V+P+H+TF+ L+AC+ GG ++G
Sbjct: 630 VIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLS 689
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
M D+ I P+ +H++C+VDLLG GRLDEA + +++ + D W ALL++CK +
Sbjct: 690 GMTPDHGILPASKHFSCIVDLLGRCGRLDEA-EKLLERTSQADVITWMALLDACKNSKEL 748
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+ E E++++L+P A +Y++L+++YA A W A +RK M+D+GI+ CS +EV
Sbjct: 749 ERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEV 808
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
+ H+F +GD SHP +EIY +L+ L +K AGYV T V HDV + K ++ HS
Sbjct: 809 NQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHS 868
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
E+LAIAFGL++TP G+ L + KNL++C DCH A K ISK+T R+I +RD +RYHHF G
Sbjct: 869 EKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGT 928
Query: 506 CSCGDYW 512
CSCGDYW
Sbjct: 929 CSCGDYW 935
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 136/299 (45%), Gaps = 53/299 (17%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIP---QRNLFLWNVLIRAYAWNGPYEVAIE 59
F + VL L+ +YS C L +A Q FDR+P +R++ WN +I A+ NG A++
Sbjct: 172 FEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQ 231
Query: 60 LYYRLLEIGLVPDN-FTFPFALKAC--SALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
L+ + G P N TF L +C + L ++E+ R IH ++ E + FV AL+D
Sbjct: 232 LFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVD 291
Query: 117 MYAK-------------------------CSCVVNA-----------RQVFDKILE-RDP 139
Y K CS +++A R F LE P
Sbjct: 292 SYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKP 351
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK-----TALVDMYAKCGLVKV 194
S TLV+V++A ++ Q F E+ + T L+ YA+ +
Sbjct: 352 SGVTLVSVLNA----CSMLQVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPR 407
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACS 252
AR F+ ++ VVSWNAM Y H S +AL LFE+M E V+P TF+ L+AC+
Sbjct: 408 ARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACA 466
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 136/291 (46%), Gaps = 49/291 (16%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
H LA+ L+ +++ C L A L DR +++ +IRA+ +G + A+EL+ R+
Sbjct: 79 HSFLASDLIVMHAKCGNLAEAEALADRFA--SVYSCTAMIRAWMEHGRPDKAMELFDRM- 135
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
+ P+ + ACS L + GRRIH + +E + +G ALI MY+KC ++
Sbjct: 136 --EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLI 193
Query: 126 NARQVFDKI---------------------------------LERD----PSEATLVTVI 148
+A+Q FD++ ++RD P+ T V+V+
Sbjct: 194 DAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVL 253
Query: 149 SA--SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF----EQL 202
+ A + +L R +HG E V+TALVD Y K G + A +F ++
Sbjct: 254 DSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEE 313
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACS 252
+V+ +AMI+ +G ++L LF M E +P +T V VL+ACS
Sbjct: 314 PSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACS 364
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 130/271 (47%), Gaps = 50/271 (18%)
Query: 75 TFPFALKACSALSAIEEGRRIHEDVIRNKWE--TDVFVGAALIDMYAKC----------- 121
T+ L+AC L A+++G+R+H ++ + + F+ + LI M+AKC
Sbjct: 45 TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104
Query: 122 ------SCVV------------NARQVFDKILERDPSEATLVTVISASADIAALPQGREL 163
SC A ++FD+ +E P+ L+ +++A + + L GR +
Sbjct: 105 RFASVYSCTAMIRAWMEHGRPDKAMELFDR-MEVRPNCHALIALVNACSCLGNLAAGRRI 163
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL---REKRVVSWNAMITGYAMH 220
H FE N + AL+ MY+KCG + A+ F++L ++ VV+WNAMI+ + +
Sbjct: 164 HSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRN 223
Query: 221 GHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFD-------EGRMFFESMVRDY 271
G + +AL LF M + P+ +TFV VL +C GL GR+ + R+
Sbjct: 224 GSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREA 283
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
+ T +VD G G LD+A ++ ++
Sbjct: 284 FV------RTALVDSYGKLGSLDDAWEVFLR 308
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRHRFELNVK--VKTALVDMYAKCGLVKVARNLF 199
+T ++ A + AL QG+ LH R +L+ + + L+ M+AKCG + A L
Sbjct: 44 STYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALA 103
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDE 259
+ R V S AMI + HG KA++LF++M EV+P+ + +++ACS G
Sbjct: 104 D--RFASVYSCTAMIRAWMEHGRPDKAMELFDRM--EVRPNCHALIALVNACSCLGNLAA 159
Query: 260 GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM--RVKPDPGVWGALLN 317
GR S + D + + ++ + G L +A ++ K D W A+++
Sbjct: 160 GRR-IHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMIS 218
Query: 318 SCKLHGHVKLA 328
+ +G + A
Sbjct: 219 AFLRNGSAREA 229
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/571 (36%), Positives = 319/571 (55%), Gaps = 67/571 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-EI 67
L+ L+++Y C + +A LF+++P R+ W ++ A + + ++ + +
Sbjct: 40 LSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQD 99
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDM---------- 117
GL PD++ F +KAC+ L A+++G+++H I + D V ++L+DM
Sbjct: 100 GLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIG 159
Query: 118 ---------------------YAKCSCVVNARQVFDKILERDPSEAT------------- 143
YA+ ++A Q+F K+ ++ T
Sbjct: 160 RVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWV 219
Query: 144 ---------------------LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
L ++I ASA++A L G+++H +E ++ V AL
Sbjct: 220 DSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNAL 279
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDH 241
VDMYAKC V A+ +F ++ ++ +VSW ++I G A HG + +AL L+ +M ++P+
Sbjct: 280 VDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNE 339
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
+TFVG++ ACS GL +GR FF SM++DY I+PS+QHYTC++DLL SG L+EA +LI
Sbjct: 340 VTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIK 399
Query: 302 QMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEG 361
M KPD W ALL++C H + + + L+ L+P D Y++LSNIYA AA WE
Sbjct: 400 AMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWES 459
Query: 362 VAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGY 421
V+K+R+LM +KK S I + ++ FL+G+ SHP +EI+ L+ L+ MK+ GY
Sbjct: 460 VSKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAGETSHPAKEEIFGLLEELDAEMKKRGY 519
Query: 422 VPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKF 481
+P T SV HD+E EK + HSERLA+A+GL+ G L I KNL++C DCH +KF
Sbjct: 520 IPDTSSVLHDLEQQEKERQLFWHSERLAVAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKF 579
Query: 482 ISKITEREITVRDVNRYHHFKDGICSCGDYW 512
IS I +REI VRD NRYHHFKDG CSC ++W
Sbjct: 580 ISIIVKREIVVRDANRYHHFKDGKCSCNNFW 610
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 161/390 (41%), Gaps = 104/390 (26%)
Query: 78 FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER 137
+ L+AC+ + G+++H +I+ + + LI+MY KC + +A +F+++ R
Sbjct: 8 YQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHR 67
Query: 138 DP-SEATLVT---------------------------------VISASADIAALPQGREL 163
DP S A+++T ++ A A + A+ QG+++
Sbjct: 68 DPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQV 127
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
H + VK++LVDMYAKCGL + R +F+ + K +SW AMI+GYA G
Sbjct: 128 HATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRK 187
Query: 224 TKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
A+ LF+KM + ++ +T +
Sbjct: 188 LDAIQLFQKMPVK---------------------------------------NLLSWTAL 208
Query: 284 VDLLGHSGRLDEACDLIMQMRVKP----DPGVWGALLNSCKLHGHVKLAELALEK----L 335
+ L SG ++ L M+MR K DP + +++ + LA L L K L
Sbjct: 209 ISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGAS-----ANLAVLGLGKQIHCL 263
Query: 336 IELEPHDAGNYV--ILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
+ L +++ +V L ++YA+ ++ K+ M+ R I SW + +
Sbjct: 264 VILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDI-----VSWTSI-------I 311
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVP 423
G A H +E + L RM G P
Sbjct: 312 VGTAQHGLAEEALS----LYNRMLSTGLKP 337
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 148/343 (43%), Gaps = 46/343 (13%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL--- 64
V+ + LV +Y+ C +FD I +N W +I YA +G AI+L+ ++
Sbjct: 141 VVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVK 200
Query: 65 -------LEIGLVP-----DNFTF-------------PFALK----ACSALSAIEEGRRI 95
L GLV D+F PF L A + L+ + G++I
Sbjct: 201 NLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQI 260
Query: 96 HEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIA 155
H VI +E+ +FV AL+DMYAKCS V+ A+++F ++++RD T + V +A +A
Sbjct: 261 HCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLA 320
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS-----W 210
+ L+ + N L+ + GLV R F + + ++ +
Sbjct: 321 E--EALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHY 378
Query: 211 NAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
++ + GH +A +L + M +PD T+ +LSAC+ G + ++
Sbjct: 379 TCLLDLLSRSGHLEEAENLIKAM--PFKPDEATWAALLSACNHHRNTLIGIRVADHLLSL 436
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACD---LIMQMRVKPDPG 310
DPS Y + ++ + + L+ M VK +PG
Sbjct: 437 KPEDPST--YILLSNIYASAAMWESVSKVRRLMAAMEVKKEPG 477
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G+ ++ LV +Y+ C + A ++F R+ QR++ W +I A +G E A+ L
Sbjct: 267 LGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSL 326
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN-KWETDVFVGAALIDMYA 119
Y R+L GL P+ TF + ACS + + +GR +I++ + L+D+ +
Sbjct: 327 YNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLS 386
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISA 150
+ + A + K + P EAT ++SA
Sbjct: 387 RSGHLEEAENLI-KAMPFKPDEATWAALLSA 416
>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
Length = 696
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/548 (38%), Positives = 308/548 (56%), Gaps = 38/548 (6%)
Query: 3 FGFHP---VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIE 59
FG+ P ++ + +Y CL A +LFD +P RN+ WN ++ +G +E
Sbjct: 149 FGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVE 208
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
Y+ L G +P+ + AC+ ++ + G + + V + + DV V +++D Y
Sbjct: 209 AYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYG 268
Query: 120 KCSCVVNARQVFDKILER---------------------------------DPSEATLVT 146
KC CV AR VFD + R +P++ + +
Sbjct: 269 KCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSS 328
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V++ A + L GR LH + R + N+ V +ALVDMY KCG ++ A +F ++ ++
Sbjct: 329 VLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRN 388
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
+V+WNAMI GYA G + AL +F+KM E P++IT V VL+ACSRGGL EG F
Sbjct: 389 LVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYELF 448
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
++M + I+P ++HY C+VDLL +G + A +I M ++P VWGALL CK+HG
Sbjct: 449 QTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGK 508
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
+L +A EKL EL+P D+GN+V+LSN+ A A W +RK M + GIKK SWI
Sbjct: 509 TELGRIAAEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKDPGRSWIT 568
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
KN H F + D +H EI A L L+G+M+ AGY+P T+ +D+E +EK + + H
Sbjct: 569 WKNVVHVFQAKDTTHDMNREIQALLAKLKGQMQAAGYMPDTQYALYDLEEEEKESEVFQH 628
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SE+LA+AFGLI P G + I KNL+IC DCH A KFIS I REI VRD N +HHFK+
Sbjct: 629 SEKLALAFGLICIPPGIPIRIMKNLRICVDCHRAFKFISGIAGREIIVRDNNMFHHFKNY 688
Query: 505 ICSCGDYW 512
CSC DYW
Sbjct: 689 ECSCKDYW 696
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 163/382 (42%), Gaps = 39/382 (10%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P L LV+LYS D A P + + I A + A+ + +L
Sbjct: 53 PFLCAHLVNLYSKLDLPGAAAASLAADPSPTVVSYTAFISGAAQHARPLQALSAFAAMLR 112
Query: 67 IGLVPDNFTFPFALK-ACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAKCSCV 124
+GL P++FTFP A K A SA G ++H +R + D FV A +DMY K C+
Sbjct: 113 LGLRPNDFTFPSAFKAAASAPPRSAAGTQLHALALRFGYLPDDAFVSCAALDMYFKTGCL 172
Query: 125 VNARQVFDKILERD---------------------------------PSEATLVTVISAS 151
AR++FD++ R+ P+ ++ +A
Sbjct: 173 ALARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNAC 232
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
A + L G + +GF + F +V V ++VD Y KC V AR +F+ + + VSW
Sbjct: 233 AGMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWC 292
Query: 212 AMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
+M+ YA +G +A ++ + +P VL+ C+ D GR VR
Sbjct: 293 SMVVAYAQNGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRS 352
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
ID ++ + +VD+ G G +++A + +M + + W A++ G A
Sbjct: 353 C-IDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQR-NLVTWNAMIGGYAHIGDAHNALS 410
Query: 331 ALEKLIELEPHDAGNYVILSNI 352
+K+I + A NY+ L N+
Sbjct: 411 VFDKMI-MGQETAPNYITLVNV 431
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 147/349 (42%), Gaps = 77/349 (22%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG ++ +V Y C C+ A +FD + RN W ++ AYA NG E A +Y
Sbjct: 252 GFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVY 311
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
G P +F L C+ L ++ GR +H +R+ ++++FV +AL+DMY KC
Sbjct: 312 LGARRAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKC 371
Query: 122 SCVVNARQVFDKILERD----------------------------------PSEATLVTV 147
+ +A QVF ++ +R+ P+ TLV V
Sbjct: 372 GGIEDAEQVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNV 431
Query: 148 ISASADIAALPQGREL-HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++A + +G EL WR E ++ +VD+ + G+ + A + + + +
Sbjct: 432 LTACSRGGLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRP 491
Query: 207 VVS-WNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+S W A++ G MHG + + GR+ E
Sbjct: 492 SISVWGALLGGCKMHGKT----------------------------------ELGRIAAE 517
Query: 266 SMVRDYHIDPS-VQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPG 310
+ + +DP ++ + ++L +GR EA D+ +M+ +K DPG
Sbjct: 518 KL---FELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKDPG 563
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/543 (39%), Positives = 322/543 (59%), Gaps = 41/543 (7%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
A+ L+H+Y C +A + FD IP N + + N + ++ ++ G
Sbjct: 127 ASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCMRNNLVYTTLSIFRSMVASGS 186
Query: 70 --VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC--VV 125
V D AL A + + IH V + + V +ID YAK +
Sbjct: 187 AGVVDEAAALVALSASARVPDRGITGGIHALVSKIGLDGQTGVANTIIDAYAKGGGHDLG 246
Query: 126 NARQVFDKILERD----------------PSEA-------------------TLVTVISA 150
AR++FD +++RD +EA TL V+ A
Sbjct: 247 AARKLFD-MMDRDVVSWNTMIALYAQNGLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLA 305
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
A A+ G+ +H R E NV V T++VDMY+KCG V++A F++++ K ++SW
Sbjct: 306 CAHAGAIQTGKRIHNQVVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSW 365
Query: 211 NAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
+AMI GY MHG+ +AL +F M K ++P++ITF+ VL+ACS GL EGR ++ +M
Sbjct: 366 SAMIAGYGMHGYGQEALHVFTDMRKSGLKPNYITFITVLAACSHAGLLSEGRYWYNTMKT 425
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
++ I+P V+HY CMVDLLG +G LDEA LI +M+VKPD +WGALL++C+++ +V+LA+
Sbjct: 426 EFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAALWGALLSACRIYKNVELAK 485
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
+ E+L EL+ ++G YV+LSNIYA A W+ V ++R L+ RGI+K S +E+K K
Sbjct: 486 ICAERLFELDATNSGYYVLLSNIYAEAGMWKEVERMRVLVKTRGIEKPPGYSSVELKGKT 545
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLA 449
H F GD SHP EIYA L+ L R+ +AGYVP T SV HD++ +E+ +M+ HSE+LA
Sbjct: 546 HLFYVGDKSHPQYKEIYAYLEKLLERIHDAGYVPNTGSVLHDLDVEERESMLRIHSEKLA 605
Query: 450 IAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
+AF L+N+ G+ + + KNL++C DCH AIK I+K+T REI +RD+ R+HHFKDG+CSCG
Sbjct: 606 VAFALMNSVQGSVIHVIKNLRVCTDCHAAIKIITKLTGREIIIRDLKRFHHFKDGLCSCG 665
Query: 510 DYW 512
DYW
Sbjct: 666 DYW 668
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 124/276 (44%), Gaps = 48/276 (17%)
Query: 92 GRRIHEDVIRNK-WETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVT---- 146
GR++H +R+ + +D + +AL+ MY C ++AR+ FD+I +P T +
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166
Query: 147 ---------------VISASADIA------------------ALPQGRELHGFSWRHRFE 173
V S SA + + G +H + +
Sbjct: 167 RNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGG--IHALVSKIGLD 224
Query: 174 LNVKVKTALVDMYAKCGL--VKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
V ++D YAK G + AR LF+ + ++ VVSWN MI YA +G ST+AL L+
Sbjct: 225 GQTGVANTIIDAYAKGGGHDLGAARKLFDMM-DRDVVSWNTMIALYAQNGLSTEALGLYS 283
Query: 232 KM---KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
KM +V+ + +T VL AC+ G G+ +VR ++ +V T +VD+
Sbjct: 284 KMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVR-MGLEDNVYVGTSVVDMYS 342
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
G+++ A +++ K + W A++ +HG+
Sbjct: 343 KCGKVEMAWKAFQKIKGK-NILSWSAMIAGYGMHGY 377
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG + + T +V +YS C + A + F +I +N+ W+ +I Y +G + A+ +
Sbjct: 325 MGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHV 384
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMY 118
+ + + GL P+ TF L ACS + EGR + + ++ ++ E V ++D+
Sbjct: 385 FTDMRKSGLKPNYITFITVLAACSHAGLLSEGRYWY-NTMKTEFGIEPGVEHYGCMVDLL 443
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL---N 175
+ C+ A + K ++ P A ++SA + + EL FEL N
Sbjct: 444 GRAGCLDEAYGLI-KEMKVKPDAALWGALLSA----CRIYKNVELAKICAERLFELDATN 498
Query: 176 VKVKTALVDMYAKCGLVK 193
L ++YA+ G+ K
Sbjct: 499 SGYYVLLSNIYAEAGMWK 516
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/556 (36%), Positives = 296/556 (53%), Gaps = 69/556 (12%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +F+ + + +WN +I Y +G A EL+ R++ + D FTF L AC+
Sbjct: 247 ARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACAN 306
Query: 86 LSAIEEGRRIHEDVIR-----------------------------------NKWETDVFV 110
G+ +H + R N DV
Sbjct: 307 AGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVS 366
Query: 111 GAALIDMYAKCSCVVNARQVFDKILERD-------------------------------- 138
++ Y + SC+ A +VF+++ ++
Sbjct: 367 WNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDV 426
Query: 139 -PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
P + T ISA ++ +L G++LHG + FE + AL+ MYA+CG VK A
Sbjct: 427 KPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANL 486
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGL 256
+F + VSWNAMI+ HGH +AL+LF++M E + PD I+F+ VL+AC+ GL
Sbjct: 487 MFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGL 546
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
DEG +FESM RD+ I P HYT ++DLLG +GR+ EA DLI M +P P +W A+L
Sbjct: 547 VDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAIL 606
Query: 317 NSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKK 376
+ C+ G ++L A ++L ++ P G Y++LSN Y+ A W A++RKLM DRG+KK
Sbjct: 607 SGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKK 666
Query: 377 SIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDE 436
CSWIE NK H F+ GD HP ++Y L+ + RM++ GYVP T+ V HD+E +
Sbjct: 667 EPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQ 726
Query: 437 KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVN 496
K +++ HSERLA+ FGL+ P G + + KNL+ICDDCH + F+SK REI VRDV
Sbjct: 727 KEHILFAHSERLAVGFGLLKLPPGATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVR 786
Query: 497 RYHHFKDGICSCGDYW 512
R+HHFKDG CSCG+YW
Sbjct: 787 RFHHFKDGECSCGNYW 802
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 177/438 (40%), Gaps = 110/438 (25%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQ--RNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
PV AT LV Y+A L A FD +PQ R+ L N +I AYA A+ ++ L
Sbjct: 88 PVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSL 147
Query: 65 LEIG-LVPDNFTFPFALKA----------------------------------------C 83
L G L PD+++F L A C
Sbjct: 148 LASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKC 207
Query: 84 SALSAIEEGRRIHEDVIRN---KWETDVF-------VGA-----------------ALID 116
AL A + R++ +++ W T V VGA A+I
Sbjct: 208 EALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMIS 267
Query: 117 MYAKCSCVVNARQVFDK-ILERDP-SEATLVTVISASADIAALPQGRELHGFSWRHR--- 171
Y VV A ++F + +LER P E T +V+SA A+ G+ +HG R +
Sbjct: 268 GYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNF 327
Query: 172 -FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA------------------ 212
E + V ALV +Y+KCG + VAR +F+ ++ K VVSWN
Sbjct: 328 VPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVF 387
Query: 213 -------------MITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFD 258
M++GY G S AL LF +M+ E V+P T+ G +SAC G
Sbjct: 388 EEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLK 447
Query: 259 EGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
G+ +V+ + S ++ + G + EA +L+ + D W A++++
Sbjct: 448 HGKQLHGHLVQ-LGFEGSNSAGNALITMYARCGAVKEA-NLMFLVMPNIDSVSWNAMISA 505
Query: 319 CKLHGHVKLAELALEKLI 336
HGH + A ++++
Sbjct: 506 LGQHGHGREALELFDRMV 523
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF L+ +Y+ C + A+ +F +P + WN +I A +G A+EL
Sbjct: 459 LGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALEL 518
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG----AALID 116
+ R++ G+ PD +F L AC+ ++EG + E + R + + G LID
Sbjct: 519 FDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKR---DFGIIPGEDHYTRLID 575
Query: 117 MYAKCSCVVNARQVFDKILERDPSEATLVTVISA 150
+ + + AR + K + +P+ + ++S
Sbjct: 576 LLGRAGRIGEARDLI-KTMPFEPTPSIWEAILSG 608
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/545 (36%), Positives = 316/545 (57%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF ++ L+ +YS L A ++ + + +++ W +I Y + + A+E +
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETF 434
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ PDN A+ AC+ + A+ +G++IH V + + DV + AL+++YA+C
Sbjct: 435 KDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARC 494
Query: 122 SCVVNARQVFDKILERDP----------------SEA-----------------TLVTVI 148
A +F+ I +D EA T V+ I
Sbjct: 495 GRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSI 554
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SASA++A + QG+++H + +V AL+ +Y KCG ++ A+ F ++ E+ V
Sbjct: 555 SASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHV 614
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWN +IT + HG +ALDLF++MK E ++P+ +TF+GVL+ACS GL +EG +F+SM
Sbjct: 615 SWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSM 674
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
++ I P HY C+VD+LG +G+LD A + +M V + VW LL++C++H ++++
Sbjct: 675 SSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEI 734
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
ELA + L+ELEPHD+ +YV+LSN YA W +RK+M DRG++K SWIEVKN
Sbjct: 735 GELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKN 794
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
HAF GD HP +IY L L+ R+ + GY+ G +FH+ E ++K HSE+
Sbjct: 795 VVHAFFVGDRLHPLAHQIYKYLADLDDRLAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEK 854
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+AFGL++ P L + KNL++C+DCH +KF S++ REI +RDV R+HHF +G CS
Sbjct: 855 LAVAFGLMSLPPSMPLRVIKNLRVCNDCHTWMKFTSEVMGREIVLRDVYRFHHFNNGNCS 914
Query: 508 CGDYW 512
CGD+W
Sbjct: 915 CGDFW 919
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 191/409 (46%), Gaps = 40/409 (9%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G P ++ L+ LY C + A ++F + N+ LWN+++ AY + +L+
Sbjct: 274 GMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLF 333
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+++ G+ P+ FT+P L+ C+ I G +IH I+ +E+D++V LIDMY+K
Sbjct: 334 CQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKY 393
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ AR++ + + +D P L + I
Sbjct: 394 GWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAI 453
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A I A+ QG+++H + + +V + ALV++YA+CG K A +LFE + K +
Sbjct: 454 SACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKI 513
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WN M++G+A G +AL++F KM + V+ + TFV +SA + +G+ ++
Sbjct: 514 TWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATV 573
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
++ + ++ L G G +++A +M + W ++ SC HG
Sbjct: 574 IKT-GCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVS-WNTIITSCSQHGWGLE 631
Query: 328 AELALEKLIE--LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
A +++ + L+P+D +L+ EG+ + + + GI
Sbjct: 632 ALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGI 680
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 158/350 (45%), Gaps = 38/350 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G G + L+ LY+ + A ++F+++ R+ W ++ YA NG E A+ LY
Sbjct: 72 GLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLY 131
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+++ G+VP + L AC+ + E+GR +H V + ++ VG ALI +Y +
Sbjct: 132 HQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRF 191
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ A +VF ++ D P T+ +++
Sbjct: 192 GSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLL 251
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A A I L +G++LH + + + ++ +L+D+Y KCG++ A +F+ VV
Sbjct: 252 AACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVV 311
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEG-RMFFES 266
WN M+ Y K+ DLF +M V+P+ T+ +L C+ G + G ++ S
Sbjct: 312 LWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLS 371
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
+ + D V ++D+ G LD+A ++ + K D W +++
Sbjct: 372 IKTGFESDMYVS--GVLIDMYSKYGWLDKARRILEVLEAK-DVVSWTSMI 418
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 122/302 (40%), Gaps = 67/302 (22%)
Query: 95 IHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---------------- 138
IH I D G LID+YAK V AR+VF+++ RD
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123
Query: 139 -----------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
P+ L +V+SA A QGR +H ++ V A
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPD 240
L+ +Y + G + +A +F ++ V++N +I+ +A G+ AL++FE+M+ PD
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVR-----DYHIDPS------------------- 276
+T +L+AC+ G ++G+ +++ DY I+ S
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFK 303
Query: 277 ------VQHYTCMVDLLGHSGRLDEACDLIMQM---RVKPDPGVWGALLNSCKLHGHVKL 327
V + M+ G L ++ DL QM V+P+ + LL +C G + L
Sbjct: 304 SGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINL 363
Query: 328 AE 329
E
Sbjct: 364 GE 365
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/556 (37%), Positives = 301/556 (54%), Gaps = 69/556 (12%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG-LVPDNFTFPFALKACS 84
A LF+ +P R + WN +I Y NG A+ + R+L + PD FT L AC+
Sbjct: 247 ALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACA 306
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA----------------- 127
L + G+++H ++R++ V ALI MYAK V NA
Sbjct: 307 NLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISF 366
Query: 128 ----------------RQVFDKILERD--------------------------------- 138
R++FD + RD
Sbjct: 367 TALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPE 426
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P+ T+ V+S A +A L G+++H + R E + V ++V MYA+ G + AR +
Sbjct: 427 PNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRV 486
Query: 199 FEQLR-EKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGL 256
F+++ K V+W +MI A HG A+ LFE+M + V+PD ITFVGVLSAC+ G
Sbjct: 487 FDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGF 546
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
DEG+ +F+ + + I P + HY CMVDLL +G EA + I QM V+PD WG+LL
Sbjct: 547 VDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLL 606
Query: 317 NSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKK 376
++C++H + LAELA EKL+ ++P ++G Y LSN+Y+ W AK+ K D+ +KK
Sbjct: 607 SACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKK 666
Query: 377 SIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDE 436
SW + N+ H F + D HP D +Y + +K+AG+VP +SV HDV+++
Sbjct: 667 ETGFSWTHIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDEL 726
Query: 437 KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVN 496
K M+ HSE+LAIAFGL++TP+ T L I KNL++C+DCH AIKFISK+ +REI +RD
Sbjct: 727 KEEMLSRHSEKLAIAFGLVSTPEKTTLRIMKNLRVCNDCHTAIKFISKVADREIILRDAT 786
Query: 497 RYHHFKDGICSCGDYW 512
R+HHFKDG CSC DYW
Sbjct: 787 RFHHFKDGFCSCKDYW 802
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 166/367 (45%), Gaps = 48/367 (13%)
Query: 12 KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
L+ LY+ L +A +F +P+R+ W V++ G + AI+++ ++ GL P
Sbjct: 101 SLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSP 160
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
FT L +C+A A GR++H V++ + V V ++++MY KC AR VF
Sbjct: 161 TQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVF 220
Query: 132 DKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGL 191
+++ ER S SW A+V + A G
Sbjct: 221 ERMPERSVS--------------------------SW-----------NAMVSLDAHLGR 243
Query: 192 VKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLS 249
+ +A +LFE + ++ +VSWNA+I GY +G + KAL F +M + PD T VLS
Sbjct: 244 MDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLS 303
Query: 250 ACSRGGLFDEGRMFFESMVRDYHIDPSVQHYT-CMVDLLGHSGRLDEACDLIMQMRVKPD 308
AC+ G+ G+ ++R P + T ++ + SG ++ A +MQ V D
Sbjct: 304 ACANLGMVSIGKQVHAYILRSRM--PYIGQVTNALISMYAKSGSVENARG-VMQQAVMAD 360
Query: 309 PGVWGALLNSCKLHGHVKLAEL--ALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLR 366
V + + L G+VKL ++ A E + D + + Y + + + +L
Sbjct: 361 LNV---ISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELF 417
Query: 367 KLMIDRG 373
+LMI G
Sbjct: 418 RLMIRSG 424
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 145/302 (48%), Gaps = 26/302 (8%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y + +A ++FD + R++ W +I Y NG + A+EL+ ++ G
Sbjct: 367 TALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPE 426
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
P+++T L C++L+ +E G++IH IR+ E V +++ MYA+ + AR+V
Sbjct: 427 PNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRV 486
Query: 131 FDKILERDPSEATLVTVISASADIAALPQ---GRELHGFSWRHRFELNVKV-KTALVDMY 186
FD++ R + ++ ++ I AL Q G + G + + VK + V +
Sbjct: 487 FDRVHWRKET-------VTWTSMIVALAQHGLGEDAVGL-FEEMLRVGVKPDRITFVGVL 538
Query: 187 AKC---GLVKVARNLFEQLREK-----RVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ 238
+ C G V + F+QL++K + + M+ A G ++A + ++M V+
Sbjct: 539 SACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMP--VE 596
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP-SVQHYTCMVDLLGHSGRLDEAC 297
PD I + +LSAC D + E ++ IDP + Y+ + ++ GR ++A
Sbjct: 597 PDAIAWGSLLSACRVHKNADLAELAAEKLL---SIDPGNSGAYSALSNVYSACGRWNDAA 653
Query: 298 DL 299
+
Sbjct: 654 KI 655
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 75/189 (39%), Gaps = 46/189 (24%)
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
+ NV +L+ +YAK G + AR +F ++ E+ VSW M+ G G +A+ +F
Sbjct: 93 QRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLD 152
Query: 233 M-KDEVQPDHITFVGVLSAC----SRG-------------------------------GL 256
M D + P T VLS+C +RG G
Sbjct: 153 MVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGD 212
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGA 314
+ R FE M + SV + MV L H GR+D A L M PD + W A
Sbjct: 213 AETARAVFERMP-----ERSVSSWNAMVSLDAHLGRMDLALSLFENM---PDRTIVSWNA 264
Query: 315 LLNSCKLHG 323
++ +G
Sbjct: 265 VIAGYNQNG 273
>gi|296086445|emb|CBI32034.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/549 (39%), Positives = 323/549 (58%), Gaps = 54/549 (9%)
Query: 6 HP---VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV-AIELY 61
HP L ++++H S D L A ++F +I N F+WN LIRA A + + AI LY
Sbjct: 57 HPNTFFLYSRILHFSSLHD-LRYAFRVFHQIENPNSFMWNALIRACARSTDRKQHAIALY 115
Query: 62 YRLLEIG-LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+R+LE G ++ D TFPF LKAC+ L A+ EG +IH +++ +++DV++ +L+ YA
Sbjct: 116 HRMLEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHAQILKLGFDSDVYINNSLVHFYAT 175
Query: 121 CSCVVNARQVFDKILER--------------------------------DPSEATLVTVI 148
C + A+ VFD++ ER +P T+ ++
Sbjct: 176 CDRLDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQKFFEPDGYTIQSIA 235
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A A + +L G +V + T+LVDMY KCG +++A LF ++ ++ V
Sbjct: 236 NACAGMGSLSLG-----------IVNDVLLNTSLVDMYCKCGSLELALQLFHRMPKRDVT 284
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
SWN+MI G++ HG AL+ F M +++ P+ ITFVGVLSAC+ GGL EGR +F+
Sbjct: 285 SWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSACNHGGLVSEGRRYFDV 344
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS-CKLHGHV 325
MV +Y I P ++HY C+VDLL +G +DEA D++ M ++PD +W +LL++ CK + V
Sbjct: 345 MVTEYKIKPELEHYGCLVDLLARAGLIDEALDVVSNMPMRPDLVIWRSLLDACCKQNAGV 404
Query: 326 KLAELALEKLIELEPHD-AGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
+L+E +++E E +G YV+LS +YA A+ W V +RKLM D+G+ K CS IE
Sbjct: 405 ELSEEMARRVLEAEGGVCSGVYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEPGCSSIE 464
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVP-GTESVFHDVENDEKANMICC 443
+ AH F +GD SHP +EIY+ L +E R++ GY P +++ D D K +
Sbjct: 465 IDGVAHEFFAGDTSHPQTEEIYSALDVIEERVERVGYSPDSSQAPMVDETIDGKQYSLRL 524
Query: 444 HSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKD 503
HSERLAIAFGL+ T G + I KNL++C++CH K IS++ REI VRD R+HHFKD
Sbjct: 525 HSERLAIAFGLLKTKPGMPIRIFKNLRVCNNCHQVTKLISRVFNREIIVRDRIRFHHFKD 584
Query: 504 GICSCGDYW 512
G CSC DYW
Sbjct: 585 GACSCMDYW 593
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/547 (38%), Positives = 318/547 (58%), Gaps = 40/547 (7%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF P + +++ ++ C + +A +LFD +P RN W +I Y +G Y A L+
Sbjct: 162 GFEPDQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLF 221
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ E TF ++A + L I GR++H I+ D+FV ALIDMY+KC
Sbjct: 222 ILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKC 281
Query: 122 SCVVNARQVFDKILERD----------------PSEA-----------------TLVTVI 148
+ +A VFD++ ++ EA T +I
Sbjct: 282 GSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIII 341
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+ +A++ + +++H R+ F L+V TALVD Y+K G V AR++F+++ + ++
Sbjct: 342 RICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNII 401
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNA+I GY HGH +A+D+FEKM ++ + P+H+TF+ VLSACS GLF+ G F+SM
Sbjct: 402 SWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSM 461
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
RD+ + P H+ CM++LLG G LDEA LI + +P +W ALL +C++HG+++L
Sbjct: 462 TRDHKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLEL 521
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
+ A EKL +EP NY++L NIY + + A + + + +G++ ACSWIEV N
Sbjct: 522 GKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRKGLRMLPACSWIEVNN 581
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTES-VFHDV-ENDEKANMICCHS 445
+ HAFLSGD H +++ K+ L + + GYVP ++ + DV EN+EK M HS
Sbjct: 582 QPHAFLSGDKHHVQIEKVVGKVDELMLNISKLGYVPEEQNFMLPDVDENEEKIRMY--HS 639
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
E+LAIA+GL+NT + T L I ++ +IC DCH IK I+ IT+REI +RD +R+HHF+DG
Sbjct: 640 EKLAIAYGLLNTLEKTPLQIVQSHRICSDCHSVIKLIAMITKREIVIRDASRFHHFRDGS 699
Query: 506 CSCGDYW 512
CSCGDYW
Sbjct: 700 CSCGDYW 706
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 159/319 (49%), Gaps = 39/319 (12%)
Query: 54 YEVAIELYYRL-LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGA 112
Y A+E++ LE G T+ + AC L +I +R+ ++ N +E D ++
Sbjct: 112 YRDALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRN 171
Query: 113 ALIDMYAKCSCVVNARQVFDKILER---------------------------------DP 139
++ M+ KC +++A ++FD++ R D
Sbjct: 172 RVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDC 231
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF 199
T T+I ASA + + GR+LH + + ++ V AL+DMY+KCG ++ A +F
Sbjct: 232 GPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVF 291
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFD 258
+++ +K +V WN++I GYA+HG+S +ALDL+ +M+D V+ DH TF ++ CSR
Sbjct: 292 DEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVA 351
Query: 259 EGRMFFESMVRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
+ S+VR+ + +D V T +VD G++D+A + +M + + W AL+
Sbjct: 352 RAKQVHASLVRNGFGLD--VVANTALVDFYSKWGKVDDARHVFDRMSCR-NIISWNALIA 408
Query: 318 SCKLHGHVKLAELALEKLI 336
HGH + A EK++
Sbjct: 409 GYGNHGHGEEAIDMFEKML 427
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 117/267 (43%), Gaps = 23/267 (8%)
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
+T +I+A + ++ + L + + FE + ++ ++ M+ KCG++ A LF++
Sbjct: 133 STYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDE 192
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEG 260
+ + VSW +I+GY G+ +A LF M++E TF ++ A + + G
Sbjct: 193 MPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPG 252
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNS 318
R ++ + + ++D+ G L++A + +M PD + W +++
Sbjct: 253 RQLHSCAIKA-GLGQDIFVSCALIDMYSKCGSLEDAHCVFDEM---PDKTIVGWNSIIAG 308
Query: 319 CKLHGHVKLAELALEKLIELEPH----DAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
LHG+ +E AL+ E+ D + I+ I +R A+ ++ ++ G
Sbjct: 309 YALHGY---SEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGF 365
Query: 375 KKSIACS---------WIEVKNKAHAF 392
+ + W +V + H F
Sbjct: 366 GLDVVANTALVDFYSKWGKVDDARHVF 392
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/540 (39%), Positives = 309/540 (57%), Gaps = 44/540 (8%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+ T ++ Y L A +LFD + RN+F W ++ YA NG +VA +L+ + E
Sbjct: 177 VVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPE- 235
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
+ ++ L + ++E + E + KW + +I + + A
Sbjct: 236 ---RNEVSWTAMLMGYTQSGRMKEAFELFE-AMPVKW---IVACNEMILQFGLAGEMHRA 288
Query: 128 RQVFDKILERDPSE---------------------------------ATLVTVISASADI 154
R +F+ + ERD ++++V+S A +
Sbjct: 289 RMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASL 348
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
A+L GR++H R F+ ++ V + L+ MY KCG + A+ +F + K VV WN+MI
Sbjct: 349 ASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMI 408
Query: 215 TGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
TGY+ HG +AL++F M VQPD +TF+GVLSACS G EG FE+M Y +
Sbjct: 409 TGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQV 468
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
+P ++HY CMVDLLG +GR+DEA +L+ +M ++PD VWGALL +C+ H + LAE+A+E
Sbjct: 469 EPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVE 528
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
KL +LEP +AG YV+LS++YA W V LRK I+R + K CSWIEV+ K H F
Sbjct: 529 KLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRK-KINRRVIKFPGCSWIEVEKKVHMFT 587
Query: 394 SGDA-SHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
GD+ SHP I L+ L G ++EAGY P V HDV+ +EK + + HSERLA+A+
Sbjct: 588 GGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVLHDVDEEEKTHSLGYHSERLAVAY 647
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
GL+ P+G + + KNL++C DCH AIK I+K+T REI +RD NR+HHFKDG CSC D+W
Sbjct: 648 GLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGSCSCKDFW 707
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 115/262 (43%), Gaps = 31/262 (11%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
+V Y +A LFD++PQRN +N +I Y NG A +++ + E +V
Sbjct: 58 MVSAYFESHKPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVV-- 115
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
++ ++ +EE ++ ++ R +V +I K S + +A+++FD
Sbjct: 116 --SWTSMVRGYVQEGMVEEAEKLFWEMPRR----NVVSWTVMIGGLLKESRIDDAKKLFD 169
Query: 133 KILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLV 192
I E+D + +I + L + REL + NV T +V YAK G V
Sbjct: 170 MIPEKDV--VVVTNMIGGYCQVGRLDEAREL----FDEMKVRNVFTWTTMVSGYAKNGRV 223
Query: 193 KVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACS 252
VAR LFE + E+ VSW AM+ GY G +A +LFE M V + AC+
Sbjct: 224 DVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMP----------VKWIVACN 273
Query: 253 R-------GGLFDEGRMFFESM 267
G RM FE M
Sbjct: 274 EMILQFGLAGEMHRARMMFEGM 295
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 156/348 (44%), Gaps = 43/348 (12%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
++ Y + +A ++FD +P+RN+ W ++R Y G E A +L++ + +V
Sbjct: 89 MISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSW 148
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
LK S I++ +++ + + E DV V +I Y + + AR++FD
Sbjct: 149 TVMIGGLLKE----SRIDDAKKLFDMIP----EKDVVVVTNMIGGYCQVGRLDEARELFD 200
Query: 133 KILERDPSEATLVTVISASA-----DIA-----ALPQGRE------LHGFSWRHR----F 172
++ R+ T T++S A D+A +P+ E L G++ R F
Sbjct: 201 EMKVRNV--FTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAF 258
Query: 173 EL----NVKVKTALVDMYAKCGL---VKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
EL VK A +M + GL + AR +FE ++E+ +WNAMI + G +
Sbjct: 259 ELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLE 318
Query: 226 ALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMV 284
AL LF +M+ E V + + + VLS C+ D GR +VR D + + ++
Sbjct: 319 ALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRS-EFDQDLYVASVLI 377
Query: 285 DLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
+ G L A + + K D +W +++ HG L E AL
Sbjct: 378 TMYVKCGDLVRAKGIFNRFLFK-DVVMWNSMITGYSQHG---LGEEAL 421
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 82/175 (46%), Gaps = 19/175 (10%)
Query: 180 TALVDMYAKCGLVKVARNLFEQ--LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEV 237
T+ + Y + G + AR +F+ L ++ + SWNAM++ Y AL LF++M
Sbjct: 23 TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMP--- 79
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
Q + ++F G++S + G+ + R F+ M + +V +T MV G ++EA
Sbjct: 80 QRNTVSFNGMISGYVKNGMVADARKVFDVMP-----ERNVVSWTSMVRGYVQEGMVEEAE 134
Query: 298 DLIMQMRVKPDPGV--W----GALLNSCKLHGHVKLAELALEKLIELEPHDAGNY 346
L +M P V W G LL ++ KL ++ EK + + + G Y
Sbjct: 135 KLFWEM---PRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGY 186
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 34/188 (18%)
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP 239
A+V Y + + A LF+Q+ ++ VS+N MI+GY +G A +F+ M +
Sbjct: 56 NAMVSAYFESHKPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPER--- 112
Query: 240 DHITFVGVLSACSRGGLFDEGRMFFESMVR---------------DYHIDPSVQHY---- 280
+ +++ ++ + G+ +E F M R + ID + + +
Sbjct: 113 NVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIP 172
Query: 281 -------TCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
T M+ GRLDEA +L +M+V+ + W +++ +G V +A
Sbjct: 173 EKDVVVVTNMIGGYCQVGRLDEARELFDEMKVR-NVFTWTTMVSGYAKNGRVDVA----R 227
Query: 334 KLIELEPH 341
KL E+ P
Sbjct: 228 KLFEVMPE 235
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/545 (35%), Positives = 317/545 (58%), Gaps = 35/545 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
+ P + L+ LY+ + +A ++F+ +P+ ++ W+ +I + NG A++++
Sbjct: 278 YELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFI 337
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
R+ E +VP+ FT L C+ G ++H V++ ++ DV+V ALID+YAKC
Sbjct: 338 RMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCE 397
Query: 123 CVVNARQVFDKILERDP---------------------------------SEATLVTVIS 149
+ A ++F ++ ++ +E T + +
Sbjct: 398 KMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALG 457
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A A +A++ G ++HG + + V V +L+DMYAKCG +KVA+ +F ++ V S
Sbjct: 458 ACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVAS 517
Query: 210 WNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WNA+I+GY+ HG +AL +F+ MK + +P+ +TF+GVLS CS GL D+G+ FESM+
Sbjct: 518 WNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMI 577
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
D+ I+P ++HYTCMV L G SG+LD+A +LI + +P +W A+L++ + + A
Sbjct: 578 CDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFA 637
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
+ E+++++ P D YV+LSN+YA A W VA +RK M ++G+KK SWIE +
Sbjct: 638 RRSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGD 697
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
H F G + HP+ I L+WL + AGYVP +V D++++EK + HSERL
Sbjct: 698 VHFFSVGSSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERL 757
Query: 449 AIAFGLINTPDG-TRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
A+A+GL+ P R+LI KNL+IC DCH A+K IS I +R++ +RD+NR+HHF G+CS
Sbjct: 758 ALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCS 817
Query: 508 CGDYW 512
C D+W
Sbjct: 818 CDDHW 822
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 168/357 (47%), Gaps = 36/357 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G+ + + L++ YS C + +A +F+ I +++ +W ++ Y NG +E +++L
Sbjct: 175 LGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQL 234
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
R+ G +P+N+TF ALKA L A + +H +++ +E D VG L+ +Y +
Sbjct: 235 LSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQ 294
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ +A +VF+++ + D P+E TL ++
Sbjct: 295 LGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSI 354
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
++ A G +LHG + F+L+V V AL+D+YAKC + A LF +L K V
Sbjct: 355 LNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNV 414
Query: 208 VSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSWN +I GY G KAL++F E ++++V +TF L AC+ + G
Sbjct: 415 VSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGL 474
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
++ + V ++D+ G + A + +M D W AL++ HG
Sbjct: 475 AIKTNNA-KRVAVSNSLIDMYAKCGDIKVAQTVFNEMET-IDVASWNALISGYSTHG 529
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 139/316 (43%), Gaps = 39/316 (12%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+A LFD +P+RN + L + YA P + LY RL G + F LK
Sbjct: 102 DALNLFDEMPERNNVSYVTLTQGYACQDP----VGLYSRLHREGHELNPHVFTSFLKLFV 157
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------ 138
+L E +H +++ ++++ FVGAALI+ Y+ C V +AR VF+ IL +D
Sbjct: 158 SLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAG 217
Query: 139 ---------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHR 171
P+ T T + AS + A + +HG +
Sbjct: 218 IVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTC 277
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
+EL+ +V L+ +Y + G + A +F ++ + VV W+ MI + +G KA+D+F
Sbjct: 278 YELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFI 337
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+M++ V P+ T +L+ C+ G G +V D V ++D+
Sbjct: 338 RMREGFVVPNEFTLSSILNGCAIGKCSGLGEQ-LHGLVVKVGFDLDVYVSNALIDVYAKC 396
Query: 291 GRLDEACDLIMQMRVK 306
++D A L ++ K
Sbjct: 397 EKMDTAVKLFAELSSK 412
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 111/251 (44%), Gaps = 35/251 (13%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF ++ L+ +Y+ C+ + A +LF + +N+ WN +I Y G A+ +
Sbjct: 377 VGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNM 436
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ L + TF AL AC++L+++E G ++H I+ V V +LIDMYAK
Sbjct: 437 FREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAK 496
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + A+ VF+++ D P+ T + V
Sbjct: 497 CGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGV 556
Query: 148 ISASADIAALPQGRE-LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL-REK 205
+S ++ + QG++ H E ++ T +V ++ + G + A NL E + E
Sbjct: 557 LSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEP 616
Query: 206 RVVSWNAMITG 216
V+ W AM++
Sbjct: 617 SVMIWRAMLSA 627
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 146/364 (40%), Gaps = 68/364 (18%)
Query: 69 LVP--DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
+VP D+ + L+ C + + IH D+++ D+F L++ Y K +
Sbjct: 43 VVPCLDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKD 102
Query: 127 ARQVFDKILERDPSEATLVTVISASADIAAL-----PQGREL--HGFS------------ 167
A +FD++ ER+ +T A D L +G EL H F+
Sbjct: 103 ALNLFDEMPERNNVSYVTLTQGYACQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 168 ----WRHR------FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
W H ++ N V AL++ Y+ CG V AR++FE + K +V W +++ Y
Sbjct: 163 EICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCY 222
Query: 218 AMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD-YHIDP 275
+G +L L +M D P++ TF L A G F + +++ Y +DP
Sbjct: 223 VENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDP 282
Query: 276 SV-----QHYTCMVDL------------------------LGHSGRLDEACDLIMQMR-- 304
V Q YT + D+ +G ++A D+ ++MR
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREG 342
Query: 305 -VKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYV--ILSNIYARAANWEG 361
V P+ ++LN C + L E L L+ D YV L ++YA+ +
Sbjct: 343 FVVPNEFTLSSILNGCAIGKCSGLGE-QLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDT 401
Query: 362 VAKL 365
KL
Sbjct: 402 AVKL 405
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/539 (36%), Positives = 310/539 (57%), Gaps = 36/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ +Y C + + +FDR+ ++ W +I YA + + A+E++ + G
Sbjct: 403 VGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEG 462
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D L+ACS L I +++H IRN D+ V +ID+Y +C V ++
Sbjct: 463 IKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSL 521
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
++F+ + ++D P LV+++ A ++
Sbjct: 522 KMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLS 581
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+L +G+E+HGF R F + + ++LVDMY+ CG + A +F ++ K +V W AMI
Sbjct: 582 SLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMIN 641
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
MHGH +A+DLF++M + V PDH++F+ +L ACS L +EG+ + + M+ Y ++
Sbjct: 642 ATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLE 701
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P +HY C+VDLLG SG+ +EA + I M +KP VW +LL +C++H + +LA +A +
Sbjct: 702 PWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANR 761
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L+ELEP + GNYV++SN++A W ++R + +RG++K ACSWIE+ N H F +
Sbjct: 762 LLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTT 821
Query: 395 GDASHPNCDEIYAKLKWLEGRM-KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
D SH + + I KL + R+ KE GY T SV HDV +EK +++ HSERLAI+FG
Sbjct: 822 RDNSHRDAERINLKLAEITERLRKEGGYTEDTRSVLHDVSEEEKVDVLHRHSERLAISFG 881
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LINT G L I KNL++C DCH K +SK+ +R+I VRD NR+HHF G CSCGD+W
Sbjct: 882 LINTRPGMPLRIAKNLRVCGDCHEFTKLVSKLFDRDIVVRDANRFHHFSGGSCSCGDFW 940
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 176/360 (48%), Gaps = 39/360 (10%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ +Y+ C + +A ++F I +++ WN ++ Y NG Y AIE +L G PD
Sbjct: 306 LLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPD 365
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+ A L + G+ +H I+ + ++D VG L+DMY KC + + VFD
Sbjct: 366 HACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFD 425
Query: 133 KILERDP-SEATLVT--------------------------------VISASADIAALPQ 159
++ +D S T++T ++ A + + +
Sbjct: 426 RMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILL 485
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
++LH ++ R+ L++ VK ++D+Y +CG V + +FE + +K +V+W +MI YA
Sbjct: 486 AKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYAN 544
Query: 220 HGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMV-RDYHIDPSV 277
G +AL LF +M+ +VQPD + V +L A +G+ ++ R++H++ ++
Sbjct: 545 SGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAI 604
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+ +VD+ G L A + ++ K D +W A++N+ +HGH K A +++++
Sbjct: 605 --VSSLVDMYSGCGSLSGALKVFNAVKCK-DMVLWTAMINATGMHGHGKQAIDLFKRMLQ 661
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 151/337 (44%), Gaps = 42/337 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI- 67
LATKL+ +Y C + +A LFD + R +F WN LI AY +G A+ + YR + +
Sbjct: 97 LATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGV-YRAMRLS 155
Query: 68 ---GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
G+ PD T LKA G +H +++ + FV ALI MYAKC +
Sbjct: 156 AASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGIL 215
Query: 125 VNARQVFDKI---------------------------LERDPSEA-------TLVTVISA 150
+A +VF+ + L R A T V V+
Sbjct: 216 DSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQV 275
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
++A L GRELH + E+N++ LV MY KCG V A +F ++ EK +SW
Sbjct: 276 CTELAQLNLGRELHAALLKSGSEVNIQCNALLV-MYTKCGRVDSALRVFREIDEKDYISW 334
Query: 211 NAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
N+M++ Y +G +A++ +M + QPDH V + SA G G+ ++
Sbjct: 335 NSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIK 394
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK 306
+D Q ++D+ ++ + + +MR+K
Sbjct: 395 Q-RLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIK 430
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 127/290 (43%), Gaps = 43/290 (14%)
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYAKCSCVV 125
G P + + L +A A+ +G ++H + D F+ L+ MY KC V
Sbjct: 53 GRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVA 112
Query: 126 NARQVFDKILERD------------------------------------PSEATLVTVIS 149
+AR +FD + R P TL +V+
Sbjct: 113 DARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLK 172
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR-VV 208
AS G E+HG + +H + + V AL+ MYAKCG++ A +FE + + R V
Sbjct: 173 ASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVA 232
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEV-QPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWN+MI+G +G +ALDLF M+ V + T VGVL C+ + GR ++
Sbjct: 233 SWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAAL 292
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
++ + ++Q +V + GR+D A + ++ K D W ++L+
Sbjct: 293 LKSGS-EVNIQCNALLV-MYTKCGRVDSALRVFREIDEK-DYISWNSMLS 339
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 117/281 (41%), Gaps = 21/281 (7%)
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK--- 234
+ T L+ MY KCG V AR LF+ + + V SWNA+I Y G + +AL ++ M+
Sbjct: 97 LATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSA 156
Query: 235 -DEVQPDHITFVGVLSACSRGGLFDEGRMFFE--SMVRDYHIDPSVQHYTCMVDLLGHSG 291
V PD T VL A G+ +GR E + + +D S ++ + G
Sbjct: 157 ASGVAPDGCTLASVLKA---SGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCG 213
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSN 351
LD A + M D W ++++ C L + L L L + ++ V+ N
Sbjct: 214 ILDSAMRVFELMHDGRDVASWNSMISGC-LQNGMFLQALDLFRGMQ-------RAVLSMN 265
Query: 352 IYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKW 411
Y + +L +L + R + ++ S EV + +A L + C + + L+
Sbjct: 266 SYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQCNALL---VMYTKCGRVDSALRV 322
Query: 412 LEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
+ E Y+ + V+N A I SE L F
Sbjct: 323 FR-EIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGF 362
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F + + LV +YS C L A ++F+ + +++ LW +I A +G + AI+L+
Sbjct: 598 FHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFK 657
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
R+L+ G+ PD+ +F L ACS + EG+
Sbjct: 658 RMLQTGVTPDHVSFLALLYACSHSKLVNEGK 688
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/539 (36%), Positives = 310/539 (57%), Gaps = 35/539 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+ L+++Y+ C L A ++F+++PQR+ W LI Y+ + A+ + ++L
Sbjct: 96 VMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRF 155
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G P+ FT +KA +A G ++H ++ ++++V VG+AL+D+Y + + +A
Sbjct: 156 GYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDA 215
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
+ VFD + R+ PS + ++ A +
Sbjct: 216 QLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSST 275
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L QG+ +H + + +L L+DMYAK G + AR +F++L ++ VVSWN+++
Sbjct: 276 GFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLL 335
Query: 215 TGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
T YA HG +A+ FE+M+ ++P+ I+F+ VL+ACS GL DEG ++E M +D I
Sbjct: 336 TAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GI 394
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P HY +VDLLG +G L+ A I +M ++P +W ALLN+C++H + +L A E
Sbjct: 395 VPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAE 454
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
+ EL+P D G +VIL NIYA W A++RK M + G+KK ACSW+E++N H F+
Sbjct: 455 HVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFV 514
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
+ D HP +EI K + + ++KE GYVP T V V+ E+ + HSE++A+AF
Sbjct: 515 ANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFA 574
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+NTP G+ + I KN+++C DCH AIK SK+ REI VRD NR+HHFKDG CSC DYW
Sbjct: 575 LLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 160/323 (49%), Gaps = 39/323 (12%)
Query: 65 LEIGLVP-DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
LE +P D + LK C+ + +GR +H ++++ + D+ +G L++MYAKC
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 124 VVNARQVFDKILERD---------------------------------PSEATLVTVISA 150
+ AR+VF+K+ +RD P+E TL +VI A
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
+A G +LHGF + F+ NV V +AL+D+Y + GL+ A+ +F+ L + VSW
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 211 NAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
NA+I G+A + KAL+LF+ M +D +P H ++ + ACS G ++G+ M++
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+ T ++D+ SG + +A + ++ K D W +LL + HG K A
Sbjct: 291 SGEKLVAFAGNT-LLDMYAKSGSIHDARKIFDRL-AKRDVVSWNSLLTAYAQHGFGKEAV 348
Query: 330 LALEKL--IELEPHDAGNYVILS 350
E++ + + P++ +L+
Sbjct: 349 WWFEEMRRVGIRPNEISFLSVLT 371
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/546 (37%), Positives = 305/546 (55%), Gaps = 37/546 (6%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFH ++ LV +Y + A ++ +PQ + WN LI +A N A++ Y
Sbjct: 1179 GFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAY 1238
Query: 62 YRLLEIGLVPDNFTFPFALKACSALS-AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ E G+ + T L ACSA ++ G IH ++ +E+D +V +LI MYAK
Sbjct: 1239 KLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAK 1298
Query: 121 CSCVVNARQVFDKILERDP---------------------------------SEATLVTV 147
C + ++ +FD + + P + +
Sbjct: 1299 CGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGG 1358
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
++A+A++A L +G++LHG + FE ++ V A +DMY KCG + + Q +
Sbjct: 1359 LAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSR 1418
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
+SWN +I+ +A HG KA + F +M K +PDH+TFV +LSAC+ GGL DEG +++S
Sbjct: 1419 LSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDS 1478
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M R++ + P ++H C++DLLG SGRL A I +M V P+ W +LL +C++HG+++
Sbjct: 1479 MTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLE 1538
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
LA E L+EL+P D YV+ SN+ A + WE V LRK M IKK ACSW+++K
Sbjct: 1539 LARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLK 1598
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
+K H+F G+ HP I AKL L KEAGYVP T HD++ ++K + HSE
Sbjct: 1599 DKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSE 1658
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
RLA+AFGLINTP+ + L I KNL++C DCH KF+S I R+I +RD R+HHF G C
Sbjct: 1659 RLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKC 1718
Query: 507 SCGDYW 512
SCGDYW
Sbjct: 1719 SCGDYW 1724
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 228/418 (54%), Gaps = 35/418 (8%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
+ LV +S C + +A LF + +R++ WN +I YA G + + ++ +L GLV
Sbjct: 170 SALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLV 229
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD +T L+A + + +IH + + + + V LI+ YAK + +A+ +
Sbjct: 230 PDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDL 289
Query: 131 FDKILERDPSEAT----------------------------------LVTVISASADIAA 156
+L++D +T L ++++ A++A+
Sbjct: 290 RKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLAS 349
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
G ++H F+ +++ +V + AL+DMYAK G ++ A+ F+++ EK V+SW ++I+G
Sbjct: 350 FALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISG 409
Query: 217 YAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
YA HG+ A+ L++KM+ + +P+ +TF+ +L ACS GL EG F +MV Y+I P
Sbjct: 410 YAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKP 469
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+HY+CMVDL G L+EA +L+ ++ +K + +WGA+L + ++G++ L + A L
Sbjct: 470 RAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNL 529
Query: 336 IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
++P ++ NYV+L++IY+ A W+ K+RKLM +R KK+ S+ + K+ L
Sbjct: 530 FNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQATKKSIPLL 587
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 184/388 (47%), Gaps = 38/388 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG L TKL+ Y + A +FD +P+R++ W ++ Y+ NG +E A L+
Sbjct: 60 GFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLF 119
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ + FT+ AL+AC++L ++ G ++ + + ++ ++FV +AL+D ++KC
Sbjct: 120 SDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKC 179
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +A +F ++ERD P TL +V+
Sbjct: 180 GKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVL 239
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
ASA+ L ++HG + + V L++ YAK G ++ A++L + + +K +
Sbjct: 240 RASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLF 299
Query: 209 SWNAMITGYAMHG-HSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
S A+ITGYA G +S ALDLF++M + D + +L+ C+ F G +
Sbjct: 300 SSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQ-IHA 358
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
Y V ++D+ SG +++A +M K + W +L++ HG+
Sbjct: 359 FALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEK-NVISWTSLISGYAKHGYGH 417
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYA 354
+A ++L K +E + + LS ++A
Sbjct: 418 MA-VSLYKKMESKGFKPNDVTFLSLLFA 444
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 170/375 (45%), Gaps = 37/375 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + L+ LYS +A +F + +R+L WN ++ Y +G +++
Sbjct: 1077 LGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKI 1136
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
LL++G V ++ TF AL ACS + E + +H +I + + VG AL+ MY K
Sbjct: 1137 LAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGK 1196
Query: 121 CSCVVNARQVFDKILERD----------------PSEA-----------------TLVTV 147
++ A++V + + D P+EA T+V+V
Sbjct: 1197 LGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSV 1256
Query: 148 ISA-SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+ A SA L G +H FE + VK +L+ MYAKCG + + +F+ L K
Sbjct: 1257 LGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKS 1316
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
++WNAM+ A HG +AL +F +M++ V D +F G L+A + + +EG+
Sbjct: 1317 PITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQ-LH 1375
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
+V + + +D+ G G + + ++ Q + W L+++ HG
Sbjct: 1376 GLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWNILISAFARHGCF 1434
Query: 326 KLAELALEKLIELEP 340
+ A ++++L P
Sbjct: 1435 QKARETFHEMLKLGP 1449
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 157/339 (46%), Gaps = 37/339 (10%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+++YS + +A +FD + RN W+ ++ Y G YE A+ L+ ++ +G+ P+
Sbjct: 785 LINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPN 844
Query: 73 NFTFPFALKACSALSAI-EEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
F + ACS + +EG ++H V++ DV+VG AL+ Y V NA+++F
Sbjct: 845 GFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLF 904
Query: 132 DKILER----------------DPSEA-----------------TLVTVISASADIAALP 158
+++ + +P E T TV S+ +
Sbjct: 905 EEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQV 964
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
G ++ G ++ FE +V V +L+ M++ V+ A +F+ + E ++SWNAMI+ YA
Sbjct: 965 LGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYA 1024
Query: 219 MHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
HG ++L F M+ + + T +LS CS GR +V +D +V
Sbjct: 1025 HHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRG-IHGLVVKLGLDSNV 1083
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
++ L +GR ++A +L+ Q + D W +++
Sbjct: 1084 CICNTLLTLYSEAGRSEDA-ELVFQAMTERDLISWNSMM 1121
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 155/346 (44%), Gaps = 44/346 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T LVH Y + ++NA +LF+ +P N+ W L+ Y+ +G + +Y R+ + G
Sbjct: 883 VGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEG 942
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ + TF +C L G ++ +I+ +E V V +LI M++ S V A
Sbjct: 943 VSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEAC 1002
Query: 129 QVFDKI---------------------------------LERDPSEATLVTVISASADIA 155
VFD + L + + TL +++S + +
Sbjct: 1003 YVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVD 1062
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L GR +HG + + NV + L+ +Y++ G + A +F+ + E+ ++SWN+M+
Sbjct: 1063 NLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMA 1122
Query: 216 GYAMHGHSTKALDLFEKMKDEVQ----PDHITFVGVLSACSRGGLFDEGRMFFE-SMVRD 270
Y G K LD + + + +Q +H+TF L+ACS E ++ +V
Sbjct: 1123 CYVQDG---KCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAG 1179
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
+H V + +V + G G + EA ++Q +PD W AL+
Sbjct: 1180 FHDFLIVGN--ALVTMYGKLGMMMEA-KKVLQTMPQPDRVTWNALI 1222
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 78 FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER 137
F LK S +++ G+ +H I +F LI+MY+K + +AR VFD++ R
Sbjct: 749 FPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHR 808
Query: 138 DPSE------------------------------------ATLVTVISASADIAALPQGR 161
+ + A+L+T S S +A +G
Sbjct: 809 NEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMA--DEGF 866
Query: 162 ELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHG 221
++HGF + +V V TALV Y GLV A+ LFE++ + VVSW +++ GY+ G
Sbjct: 867 QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSG 926
Query: 222 HSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM--VRDYHIDPSVQ 278
+ + L+++++M+ E V + TF V S+C GL ++ + ++ + + Y + SV
Sbjct: 927 NPGEVLNVYQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQYGFEDSVS 983
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
++ + ++EAC + M + D W A++++ HG
Sbjct: 984 VANSLISMFSSFSSVEEACYVFDHMN-ECDIISWNAMISAYAHHG 1027
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 34/210 (16%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
L+ C A ++G IH +I N + +D+ + LI Y K V+ AR VFD + ER
Sbjct: 37 LQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSV 96
Query: 139 --------------------------------PSEATLVTVISASADIAALPQGRELHGF 166
++ T + + A + L G ++ G
Sbjct: 97 VSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGC 156
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ RF N+ VK+ALVD ++KCG ++ A LF + E+ VVSWNAMI GYA+ G + +
Sbjct: 157 IQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDS 216
Query: 227 LDLFEKM-KDEVQPDHITFVGVLSACSRGG 255
+F M + + PD T VL A + GG
Sbjct: 217 FCMFRSMLRGGLVPDCYTLGSVLRASAEGG 246
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 139/295 (47%), Gaps = 36/295 (12%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV-AIE 59
+G+G + ++ L++ Y+ L +A L + +++LF LI YA G Y V A++
Sbjct: 261 LGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALD 320
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
L+ + ++ + D+ L C+ L++ G +IH ++ + DV +G ALIDMYA
Sbjct: 321 LFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYA 380
Query: 120 KCSCVVNARQVFDKILERD---------------------------------PSEATLVT 146
K + +A++ FD++ E++ P++ T ++
Sbjct: 381 KSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLS 440
Query: 147 VISASADIAALPQGRE-LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
++ A + +G E + ++ + + + +VD++A+ GL++ A NL ++ K
Sbjct: 441 LLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIK 500
Query: 206 RVVS-WNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDE 259
S W A++ +++G+ + + + + + + +V + S S GL+D+
Sbjct: 501 HNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDD 555
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 132/285 (46%), Gaps = 34/285 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF +A L+ ++S+ + A +FD + + ++ WN +I AYA +G ++ +
Sbjct: 977 GFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCF 1036
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + + ++ T L CS++ ++ GR IH V++ +++V + L+ +Y++
Sbjct: 1037 HWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEA 1096
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+A VF + ERD + T + +
Sbjct: 1097 GRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASAL 1156
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A ++ L + + +H F + V ALV MY K G++ A+ + + + + V
Sbjct: 1157 AACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRV 1216
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACS 252
+WNA+I G+A + +A+ ++ ++++ P ++IT V VL ACS
Sbjct: 1217 TWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACS 1261
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 132/306 (43%), Gaps = 46/306 (15%)
Query: 117 MYAKCSCVVNARQVFD--KILERDPSE---ATLVTVISASADIAALPQGRELHGFSWRHR 171
M++K N ++ + K+L +P+ + + ++ D A QG +H +
Sbjct: 1 MFSKIQSACNLGRLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNG 60
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
F ++ + T L+ Y K G V ARN+F+ + E+ VVSW AM++GY+ +G KA LF
Sbjct: 61 FGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFS 120
Query: 232 KMKD-EVQPDHITFVGVLSACSR----------GGLFDEGR----MFFESMVRDYH---- 272
M+ V+ + T+ L AC+ G +GR +F +S + D+H
Sbjct: 121 DMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCG 180
Query: 273 ------------IDPSVQHYTCMVDLLGHSGRLDEACDLIMQM---RVKPDPGVWGALLN 317
++ V + M+ G D++ + M + PD G++L
Sbjct: 181 KMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLR 240
Query: 318 SCKLHGHVKLAELALEKLIELEPHDAGNYVILS----NIYARAANWEGVAKLRKLMIDRG 373
+ G + +A + +L G+Y I++ N YA+ + LRK M+ +
Sbjct: 241 ASAEGGGLIIANQIHGIITQL---GYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKD 297
Query: 374 IKKSIA 379
+ S A
Sbjct: 298 LFSSTA 303
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 103/225 (45%), Gaps = 9/225 (4%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ +Y+ + +A + FD + ++N+ W LI YA +G +A+ LY ++ G
Sbjct: 371 MGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKG 430
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMYAKCSCVVN 126
P++ TF L ACS EG +++ NK+ + ++D++A+ +
Sbjct: 431 FKPNDVTFLSLLFACSHTGLTAEGCECFNNMV-NKYNIKPRAEHYSCMVDLFARQGLLEE 489
Query: 127 ARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
A + KI + + + ++ AS+ + G+E + + E +V L +Y
Sbjct: 490 AYNLLCKI-DIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNY-VVLASIY 547
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
+ GL A + +L E+R NA GY+ + K++ L +
Sbjct: 548 SAAGLWDDAWKI-RKLMEERSTKKNA---GYSFFQATKKSIPLLQ 588
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + + +Y C +H+ ++ + R+ WN+LI A+A +G ++ A E
Sbjct: 1381 LGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARET 1440
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG----AALID 116
++ +L++G PD+ TF L AC+ ++EG ++ + R E VF G +ID
Sbjct: 1441 FHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTR---EFGVFPGIEHCVCIID 1497
Query: 117 MYAKCSCVVNARQVFDKILERDPSEATLVTVISA 150
+ + + +A + F K + P++ ++++A
Sbjct: 1498 LLGRSGRLSHA-EGFIKEMPVPPNDLAWRSLLAA 1530
>gi|297735590|emb|CBI18084.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/494 (43%), Positives = 287/494 (58%), Gaps = 75/494 (15%)
Query: 29 LFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSA 88
LF +I Q N+FLWN +IR N ++ AIE Y + G +P+NFTFPF LKAC+ L
Sbjct: 68 LFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLD 127
Query: 89 IEEGRRIHEDVIRNKW----------ETDVFVGAALIDMYAKCSCVVNARQVFDKILERD 138
++ G +IH V++ +W +VFVG +L+DMYAKC + AR VFD + E+D
Sbjct: 128 LQLGVKIHTLVVK-EWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKD 186
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
SW A++ YA GL K A +L
Sbjct: 187 I--------------------------VSW-----------GAMIQGYALNGLPKEAIDL 209
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFD 258
F Q++ + K ++PD TF+G+L C+ GL D
Sbjct: 210 FLQMQREN---------------------------KLGIKPDGNTFIGLLCGCTHAGLVD 242
Query: 259 EGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
EGR +F SM R + + PS++HY CMVDLLG +G LDEA LI M ++ + VWGALL +
Sbjct: 243 EGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGA 302
Query: 319 CKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
C++H +LAELAL++LIELEP ++GNYV+LSNIY+ W+ AK+R M ++ I+K
Sbjct: 303 CRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPP 362
Query: 379 ACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKA 438
CSWIEV H FL GD HP ++IYAKL L +MK AGYVP T+ V D+E +EK
Sbjct: 363 GCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKE 422
Query: 439 NMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRY 498
+ + CHSE+LAIAFGLI+ + + KNL++C DCH+AIK IS IT REITVRD NR+
Sbjct: 423 HFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIKLISSITGREITVRDNNRF 482
Query: 499 HHFKDGICSCGDYW 512
H F++G CSC DYW
Sbjct: 483 HCFREGSCSCNDYW 496
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG + + T LV +Y+ C + A +FD +P++++ W +I+ YA NG + AI+L
Sbjct: 150 MGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDL 209
Query: 61 YYRLL---EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR 101
+ ++ ++G+ PD TF L C+ ++EGRR + R
Sbjct: 210 FLQMQRENKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYR 253
>gi|356521885|ref|XP_003529581.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Glycine max]
Length = 603
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/539 (39%), Positives = 307/539 (56%), Gaps = 39/539 (7%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L++ Y + +A +LFD +P RN+ W L+ Y G +A+ L++++ ++P+
Sbjct: 65 LINCYLRLFTIDHAQKLFDEMPHRNVVSWTSLMAGYVSQGQPNMALCLFHQMQGTLVLPN 124
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
FTF + ACS L+ +E GRRIH V + +++ ++LIDMY KC+ V AR +FD
Sbjct: 125 EFTFATLINACSILANLEIGRRIHALVEVSGLGSNLVACSSLIDMYGKCNHVDEARLIFD 184
Query: 133 KILERD----------------------------------PSEATLVTVISASADIAALP 158
+ R+ P+ L + +SA A + +L
Sbjct: 185 SMCTRNVVSWTSMITTYSQNAQGHHALQLFKEFNHSRLDKPNHFMLCSAVSACASLGSLG 244
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
G+ HG R E + + +ALVDMYAKCG V + +F +++ V+ + +MI G A
Sbjct: 245 SGKITHGVVIRLGHEASDVIASALVDMYAKCGCVNYSAKIFRRIQNPSVIPYTSMIVGAA 304
Query: 219 MHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
+G +L LF++M ++P+ ITFVGVL ACS GL D+G +SM Y + P
Sbjct: 305 KYGLGILSLQLFQEMVVRRIKPNDITFVGVLHACSHSGLVDKGLELLDSMDGKYGVTPDA 364
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPD--PGVWGALLNSCKLHGHVKLAELALEKL 335
+HYTC+ D+LG GR++EA L ++V+ D +WG LL++ +L+G V +A A +L
Sbjct: 365 KHYTCIADMLGRVGRIEEAYQLAKSVQVEGDGYAMLWGTLLSASRLYGRVDIALEASNRL 424
Query: 336 IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG 395
IE AG YV LSN YA A +WE LR M G+ K SWIE+K + F +G
Sbjct: 425 IESNQQVAGAYVTLSNAYALAGDWENAHNLRSEMKHTGVYKEPGSSWIEIKESTYLFHAG 484
Query: 396 DAS-HPNCDEIYAKLKWLEGRMKEAGYVPGTES-VFHDVENDEKANMICCHSERLAIAFG 453
D S + EI + L+ LE RMK GYV GT+ VF DVE + K ++ HSE+LA+AFG
Sbjct: 485 DISKYTQGREILSLLRELEERMKGRGYVGGTKGLVFVDVEEEAKEEIVSMHSEKLALAFG 544
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LINTP G + I KNL++C DCH A K IS I ERE+ VRDVNR+HHFK+G+C+CGD+W
Sbjct: 545 LINTPKGVTIRIMKNLRMCRDCHGAFKLISDIVERELVVRDVNRFHHFKNGLCTCGDFW 603
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+A+ LV +Y+ C C++ + ++F RI ++ + +I A G ++++L+ ++
Sbjct: 263 VIASALVDMYAKCGCVNYSAKIFRRIQNPSVIPYTSMIVGAAKYGLGILSLQLFQEMVVR 322
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYAKCSCVV 125
+ P++ TF L ACS +++G + D + K+ D + DM + +
Sbjct: 323 RIKPNDITFVGVLHACSHSGLVDKGLEL-LDSMDGKYGVTPDAKHYTCIADMLGRVGRIE 381
Query: 126 NARQVFDKI-LERDPSEATLVTVISAS-----ADIAALPQGRELHGFSWRHRFELNVKVK 179
A Q+ + +E D T++SAS DIA R + E N +V
Sbjct: 382 EAYQLAKSVQVEGDGYAMLWGTLLSASRLYGRVDIALEASNRLI---------ESNQQVA 432
Query: 180 TALVDM---YAKCGLVKVARNLFEQLREKRV 207
A V + YA G + A NL +++ V
Sbjct: 433 GAYVTLSNAYALAGDWENAHNLRSEMKHTGV 463
>gi|317106766|dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/523 (38%), Positives = 318/523 (60%), Gaps = 38/523 (7%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNG-PYEVAIELYYRLLEIGLV-PDNFTFPFALKAC 83
A ++F +IP +F +N +IR + P + I L+ ++ G P+ FT F LKAC
Sbjct: 43 ARKIFSQIPNPGIFAYNSVIRGCLYTKIPSKEPIHLFKDMVGKGYPNPNTFTMAFVLKAC 102
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER------ 137
S + A+EEG++IH ++R+ + + +V ++L++ Y+KC + AR+VFD+I ER
Sbjct: 103 SIIMALEEGKQIHAQILRSGFSSSPYVQSSLVNFYSKCEEITIARKVFDEITERNLVCWS 162
Query: 138 ---------------------------DPSEATLVTVISASADIAALPQGRELHGFSWRH 170
+P E +LV V+SA A + AL G+ +H + +
Sbjct: 163 AMVSGYARLGMINEALIMFREMQVVGIEPDEVSLVGVLSACAMVGALDIGKWVHAYIKKR 222
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
+++++ TAL++MYAKCG ++ AR +F+++R K +W++MI G A+HG + AL++F
Sbjct: 223 MIHVDLELNTALINMYAKCGCIEKAREIFDEMRVKDSKAWSSMIVGLAIHGLAEDALNVF 282
Query: 231 EKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGH 289
+M++ + +P+H+TF+G+LSAC+ GGL +G+ ++ SM+ + I+PS++HY CMVDLL
Sbjct: 283 SRMEEAQAKPNHVTFIGILSACAHGGLVSDGKRYWSSML-ELGIEPSMEHYGCMVDLLCR 341
Query: 290 SGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVIL 349
G +DEA D + + PDP +W LL + + ++ AE+ KL+ELEP A NY+IL
Sbjct: 342 GGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAEMVAGKLLELEPWKAENYIIL 400
Query: 350 SNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKL 409
+N+YA + E V+ +RK+M + GIK C+ IEV H F++GD SHP +EI L
Sbjct: 401 ANLYASVSQLEKVSHVRKMMKENGIKALPGCTSIEVDGFVHNFVTGDWSHPEAEEIKKTL 460
Query: 410 KWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNL 469
+ + ++ +GY P V H V ++EK N++ HSERLAIA+GL+ T + I KNL
Sbjct: 461 RDVALKILISGYKPFVSVVLHLVNDEEKENVLYEHSERLAIAYGLMKTKAPATIRIVKNL 520
Query: 470 KICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++C DCH K ISKI +REI VRD R+H F +G CSC DYW
Sbjct: 521 RVCGDCHEVTKIISKIYDREIIVRDRVRFHKFVNGTCSCKDYW 563
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T L+++Y+ C C+ A ++FD + ++ W+ +I A +G E A+ ++ R+ E
Sbjct: 230 LNTALINMYAKCGCIEKAREIFDEMRVKDSKAWSSMIVGLAIHGLAEDALNVFSRMEEAQ 289
Query: 69 LVPDNFTFPFALKACSALSAIEEGRR 94
P++ TF L AC+ + +G+R
Sbjct: 290 AKPNHVTFIGILSACAHGGLVSDGKR 315
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/569 (36%), Positives = 313/569 (55%), Gaps = 69/569 (12%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG-LVP 71
+V LY+ + A +F+ + +R++ WN +I Y NG ++A++ + R+L + P
Sbjct: 235 MVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEP 294
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV------- 124
D FT L AC+ L ++ G+++H ++R + ALI YAK V
Sbjct: 295 DEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIM 354
Query: 125 --------------------------VNARQVFDKILERD-------------------- 138
AR+VFD + RD
Sbjct: 355 DKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEA 414
Query: 139 -------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
P+ TL V+SA A +A L G+++H + R E +V V A++ +
Sbjct: 415 MELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITV 474
Query: 186 YAKCGLVKVARNLFEQL-REKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHIT 243
YA+ G V +AR +F+Q+ K V+W +MI A HG +A+ LFE+M + V+PD +T
Sbjct: 475 YARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVT 534
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
++GV SAC+ G D+G+ ++E M+ ++ I P + HY CMVDLL +G L EA + I +M
Sbjct: 535 YIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRM 594
Query: 304 RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVA 363
V PD VWG+LL +C++ + LAELA EKL+ ++P ++G Y L+N+Y+ W A
Sbjct: 595 PVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAA 654
Query: 364 KLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVP 423
++ KL D+ +KK SW V++K H F + D HP D I K + +K+AG+VP
Sbjct: 655 RIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKKAAEMWEEIKKAGFVP 714
Query: 424 GTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFIS 483
SV HDV+++ K ++ HSE+LAIAFGLI+TP+ T L I KNL++C+DCH AIKFIS
Sbjct: 715 DLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFIS 774
Query: 484 KITEREITVRDVNRYHHFKDGICSCGDYW 512
K+ +REI VRD R+HHF+DG CSC DYW
Sbjct: 775 KVVDREIIVRDATRFHHFRDGYCSCKDYW 803
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 140/319 (43%), Gaps = 44/319 (13%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ +Y+ L +A +F ++P+R+ W V++ G + A++ + ++ GL P
Sbjct: 103 LLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPS 162
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
F L +C+A A GR++H VI+ + V V +++ MY KC AR VF+
Sbjct: 163 QFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFE 222
Query: 133 KILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLV 192
++ R S SW A+V +Y G +
Sbjct: 223 RMKVRSES--------------------------SW-----------NAMVSLYTHQGRM 245
Query: 193 KVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSA 250
+A ++FE + E+ +VSWNA+I GY +G AL F +M ++PD T VLSA
Sbjct: 246 DLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSA 305
Query: 251 CSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPG 310
C+ + G+ ++R + S Q ++ SG + E IM V D
Sbjct: 306 CANLRMLKMGKQMHSYILRT-GMPYSSQIMNALISTYAKSGSV-ETARRIMDKAVVADLN 363
Query: 311 VWGALLNSCKLHGHVKLAE 329
V + + L G+VKL +
Sbjct: 364 V---ISFTALLEGYVKLGD 379
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 153/363 (42%), Gaps = 69/363 (19%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIP-------------------------------QRN 37
+A ++++Y C A +F+R+ +R+
Sbjct: 200 VANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERS 259
Query: 38 LFLWNVLIRAYAWNGPYEVAIELYYRLLEI-GLVPDNFTFPFALKACSALSAIEEGRRIH 96
+ WN +I Y NG ++A++ + R+L + PD FT L AC+ L ++ G+++H
Sbjct: 260 IVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMH 319
Query: 97 EDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAA 156
++R + ALI YAK V AR++ DK + D
Sbjct: 320 SYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVAD------------------ 361
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
LNV TAL++ Y K G K AR +F+ + + V++W AMI G
Sbjct: 362 -----------------LNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVG 404
Query: 217 YAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
Y +G + +A++LF M + +P+ T VLSAC+ G+ +R +
Sbjct: 405 YEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQ-EQ 463
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
SV ++ + SG + A + Q+ + + W +++ + HG + A + E++
Sbjct: 464 SVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEM 523
Query: 336 IEL 338
+ +
Sbjct: 524 LRV 526
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 124/282 (43%), Gaps = 41/282 (14%)
Query: 91 EGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------------ 138
E RR+ +D+ + + F +L+ MYAK + +AR VF ++ ERD
Sbjct: 82 EARRLFDDIPYAR--RNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLN 139
Query: 139 ---------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
PS+ L V+S+ A A GR++H F + V
Sbjct: 140 RAGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVP 199
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEV 237
V +++ MY KCG + AR +FE+++ + SWNAM++ Y G AL +FE M++
Sbjct: 200 VANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEER- 258
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
+++ +++ ++ GL D FF M+ ++P T ++ + L
Sbjct: 259 --SIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGK 316
Query: 298 DL---IMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
+ I++ + + AL+++ G V+ A ++K +
Sbjct: 317 QMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAV 358
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 96/251 (38%), Gaps = 42/251 (16%)
Query: 92 GRRIHEDVIRNKWETDVFVGAALIDMYAKCS----CVVNARQVFDKILERDPSEATLVTV 147
GR IH ++ ++ L+ YA+ C AR++FD I
Sbjct: 44 GRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDI------------- 90
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
P R + F+W +L+ MYAK G + AR +F Q+ E+
Sbjct: 91 ----------PYARR-NAFTW-----------NSLLSMYAKSGRLADARVVFAQMPERDA 128
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSW M+ G G A+ F M E + P VLS+C+ GR S
Sbjct: 129 VSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRK-VHS 187
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
V + V ++ + G G + A + +M+V+ + W A+++ G +
Sbjct: 188 FVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMKVRSESS-WNAMVSLYTHQGRMD 246
Query: 327 LAELALEKLIE 337
LA E + E
Sbjct: 247 LALSMFENMEE 257
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/590 (35%), Positives = 329/590 (55%), Gaps = 86/590 (14%)
Query: 9 LATKLVHLYSACDC--LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV-AIELYYRLL 65
+AT+++ L + D + A +FD++P+RN F WN +IRA A + A+ ++ ++L
Sbjct: 49 IATEILRLSATSDFRDIGYALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQML 108
Query: 66 -EIGLVPDNFTFPFALKACSALSAIEEGRRIH-----------EDVIRNKWETDVFVGA- 112
E + P+ FTFP LKAC+ ++ + EG+++H E V+ N V G+
Sbjct: 109 SEATVEPNQFTFPSVLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSM 168
Query: 113 -----------------------------------ALIDMYAKCSCVVNARQVFDKILER 137
++D YA+ + AR++FD++ +R
Sbjct: 169 EDANVLFYRNVEGVDDVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQR 228
Query: 138 D----------------------------------PSEATLVTVISASADIAALPQGREL 163
P+ TLV+V+ A + + L G+ +
Sbjct: 229 SVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWV 288
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
H ++ +++ ++ + +ALVDMYAKCG ++ A +FE+L + V++WNA+I G AMHG +
Sbjct: 289 HLYAEKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKA 348
Query: 224 TKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTC 282
+ +M K + P +T++ +LSACS GL DEGR FF MV + P ++HY C
Sbjct: 349 NDIFNYLSRMEKCGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGC 408
Query: 283 MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHD 342
MVDLLG +G L+EA +LI+ M +KPD +W ALL + K+H ++K+ A E L+++ PHD
Sbjct: 409 MVDLLGRAGYLEEAEELILNMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHD 468
Query: 343 AGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNC 402
+G YV LSN+YA + NW+GVA +R +M D I+K CSWIE+ H FL D SH
Sbjct: 469 SGAYVALSNMYASSGNWDGVAAVRLMMKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRA 528
Query: 403 DEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTR 462
+I++ L+ + ++ G++P T V ++ K +++ HSE++A+AFGLI+TP T
Sbjct: 529 KDIHSMLEEISNKLSLEGHMPDTTQVLLKMDEKHKESVLHYHSEKIAVAFGLISTPPKTP 588
Query: 463 LLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L I KNL+IC+DCH ++K ISK+ ER+I +RD R+HHF+ G CSC DYW
Sbjct: 589 LCIVKNLRICEDCHSSMKLISKMYERKIVIRDRKRFHHFEHGSCSCMDYW 638
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL + LV +Y+ C + A Q+F+R+PQ N+ WN +I A +G R+ +
Sbjct: 302 VLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKC 361
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN 102
G+ P + T+ L ACS ++EGR D++ +
Sbjct: 362 GISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNS 396
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/554 (38%), Positives = 316/554 (57%), Gaps = 69/554 (12%)
Query: 28 QLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALS 87
+F+++ N FL+N LIR Y + + E Y + + G+VP +FTF KAC A
Sbjct: 101 SIFNQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKM 160
Query: 88 AIEEGRRIH-EDVIRNKWETDVFVGAALIDMY---------------------------- 118
+ GR+IH + ++ + D+ VG ++IDMY
Sbjct: 161 DVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELI 220
Query: 119 ---AKCSCVVNARQVFDKILERD----------------PSEA----------------- 142
K + +A ++FD + +D P EA
Sbjct: 221 SAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEI 280
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRF--ELNVKVKTALVDMYAKCGLVKVARNLFE 200
TL+ VISA A + A + + + F + +V V +AL+DMY+KCG V A +F+
Sbjct: 281 TLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQ 340
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDE 259
++E+ V S+++MI G+AMHG A+ LF++M K E++P+ +TF+GVL+ACS G+ ++
Sbjct: 341 GMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQ 400
Query: 260 GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC 319
G FE M + Y I PS HYTCMVDLLG +GRL EA +L+ M ++P GVWGALL +C
Sbjct: 401 GWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGAC 460
Query: 320 KLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIA 379
++H +A +A L ELEP+ GNY++L+NIYA W V+ +RKLM RG++K+ A
Sbjct: 461 RIHKSPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPA 520
Query: 380 CSWIEV-KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKA 438
SWIE K H F SGD +HP EI L+ L R++ GY P SV +DV +++K
Sbjct: 521 FSWIESEKGMVHEFFSGDMTHPRSGEIKQALEDLLDRLEAKGYQPHLSSVSYDVNDEDKR 580
Query: 439 NMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRY 498
++ HSE+LA+AFGLI+T G+++ I KNL+IC+DCH I S+IT REI VRD+ R+
Sbjct: 581 RILMTHSEKLALAFGLISTIPGSKIRIVKNLRICEDCHSVICGASQITGREIIVRDIMRF 640
Query: 499 HHFKDGICSCGDYW 512
HHF DGICSCG++W
Sbjct: 641 HHFHDGICSCGNFW 654
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 102/219 (46%), Gaps = 28/219 (12%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+ + L+ +YS C + +A+++F + +RN++ ++ +I +A +G A++L+ +++
Sbjct: 317 VVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKT 376
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN---KWETDVFVGAALIDMYAKCSCV 124
+ P+ TF L ACS +E+G +I E + + K D + ++D+ + +
Sbjct: 377 EIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHY--TCMVDLLGRAGRL 434
Query: 125 VNARQVFDKILERDPSEATLVTVISA-----SADIAALPQGRELHGFSWRHRFELN---V 176
A ++ K + +P ++ A S DIAA+ + H FEL +
Sbjct: 435 QEAHELV-KTMPIEPHGGVWGALLGACRIHKSPDIAAI---------AANHLFELEPYCI 484
Query: 177 KVKTALVDMYAKCGL---VKVARNLFEQ--LREKRVVSW 210
L ++YA CG V R L LR+ SW
Sbjct: 485 GNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSW 523
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/552 (38%), Positives = 315/552 (57%), Gaps = 46/552 (8%)
Query: 6 HPVLATKLVHLYSACDC----LHNAHQLFDRIPQRNLFLW-NVLIRAYA-----WNGPYE 55
HP L T+L+ L + L A Q+FDR+ Q + +W N L+R YA +
Sbjct: 56 HPALVTRLLTLCTGPGAGPAHLAYARQVFDRVTQPSDAVWYNTLLRGYARSSSSSSSSSA 115
Query: 56 VAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALI 115
A+ ++ R+LE G+ PD +TF LKAC+A A E GR+ H ++ +V LI
Sbjct: 116 AAVRVFVRMLEEGVAPDTYTFVSLLKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLI 175
Query: 116 DMYAKCSCVVNARQVFDK--------------------------ILERD-------PSEA 142
+MYA+C AR F + +L R+ P+
Sbjct: 176 NMYAECGDARAARVTFGRADGDCVVSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPV 235
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T+++V+SA A + AL GR LH + + VKV TALVDMYAKCG ++ A +F+ +
Sbjct: 236 TVISVLSACALLGALQLGRWLHDYVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGM 295
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR 261
+ +W+ MI YA HG+ +A+ LFE+MK + ++PD ITF+G+L ACS GL EG
Sbjct: 296 ESRDRQAWSVMIVAYANHGYGREAISLFEEMKKQGMKPDDITFLGLLYACSHSGLVSEGL 355
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
+F+ M +D+ I P ++HY C+ DLL SG+L+ A I ++ + P P +W LL++C
Sbjct: 356 RYFDDM-KDHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGG 414
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
HG V+L + E+++EL+ G+YVI SN+ A WE + ++RKLM D+G+ K CS
Sbjct: 415 HGDVELGKRVFERILELDDSHGGDYVIFSNLCANTGYWEEMNRVRKLMSDKGVVKVPGCS 474
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFH-DVENDEKANM 440
IE+ N H F +GD HP E + + ++K GY+P T VFH ++ +EKA
Sbjct: 475 SIEIDNTVHEFFAGDGRHPKSQEARKMVDEVIDQLKLVGYIPDTSHVFHVEMGEEEKAIS 534
Query: 441 ICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHH 500
+ HSE+LAIAFGL+NT G L + KNL++C DCH KF+S + R I +RD+NR+HH
Sbjct: 535 LKYHSEKLAIAFGLLNTAPGATLRVVKNLRVCPDCHSMAKFVSMVFNRRIILRDLNRFHH 594
Query: 501 FKDGICSCGDYW 512
F+ GICSCGDYW
Sbjct: 595 FERGICSCGDYW 606
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/521 (38%), Positives = 299/521 (57%), Gaps = 34/521 (6%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
AH++F NLF+WN +IR Y+ + AI LY + G+ P+++TF F LKAC
Sbjct: 60 AHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCK 119
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPS----- 140
L + EG+ +H +++ + + + LI +YA C C+ A +FD++ E D +
Sbjct: 120 LLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTM 179
Query: 141 -----------EA-----------------TLVTVISASADIAALPQGRELHGFSWRHRF 172
EA TL +V+ D+ AL G+ +H + +
Sbjct: 180 VSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGV 239
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
+++V + TALV MY+KCG + A +F+ + E+ V +W+ MI GYA+HGH KAL LF+
Sbjct: 240 KIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDA 299
Query: 233 MK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
MK + P+ +TF VLSACS GL ++G FE+M +Y I P ++HY CMVDL +G
Sbjct: 300 MKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAG 359
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSN 351
+ A I M ++P+ +W LL +CK HG+ L E K+++L+P NYV++SN
Sbjct: 360 MVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSN 419
Query: 352 IYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKW 411
+YA W V ++R LM D+ KK S IE+ H F+ GD SHP ++IY L
Sbjct: 420 VYASLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQ 479
Query: 412 LEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKI 471
+ ++K+ G+V T V HD++ +EK + HSERLAIA+GL++TP+G+ + I KNL++
Sbjct: 480 MARKLKQVGHVNSTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRV 539
Query: 472 CDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
C DCH IK IS++ REI VRD R+HHF++ CSC DYW
Sbjct: 540 CRDCHEVIKLISEVYNREIIVRDRVRFHHFRERGCSCNDYW 580
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 144/312 (46%), Gaps = 13/312 (4%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G F L L+ LY+AC C+ A +FD +P+ + W+ ++ YA NG A++L
Sbjct: 136 VGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKL 195
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + + D FT + C L A++ G+ +H + + + DV +G AL+ MY+K
Sbjct: 196 FREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSK 255
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
C + NA +VF + ERD + + T+I+ A + +L R + N T
Sbjct: 256 CGSLDNALKVFQGMAERDVTAWS--TMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFT 313
Query: 181 ALVDMYAKCGLVKVARNLFEQLREK-----RVVSWNAMITGYAMHGHSTKALDLFEKMKD 235
+++ + GLV+ +FE + + ++ + M+ + G A + M
Sbjct: 314 SVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMP- 372
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV-QHYTCMVDLLGHSGRLD 294
++P+ + + +L AC G D G +++ +DPS ++Y + ++ GR
Sbjct: 373 -IEPNVVLWRTLLGACKTHGYKDLGEHISRKILK---LDPSSPENYVLVSNVYASLGRWS 428
Query: 295 EACDLIMQMRVK 306
C + M+ K
Sbjct: 429 SVCQVRSLMKDK 440
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 3/136 (2%)
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVL 248
G V A +F + WN +I GY++ A+ L+ M + P+ TF VL
Sbjct: 55 GHVAYAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVL 114
Query: 249 SACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPD 308
AC + EG+ +V+ +D ++ L G +D AC + +M +PD
Sbjct: 115 KACCKLLRLCEGQELHSQIVK-VGLDFETPLVNGLIKLYAACGCMDYACVMFDEMP-EPD 172
Query: 309 PGVWGALLNSCKLHGH 324
W +++ +G
Sbjct: 173 SASWSTMVSGYAQNGQ 188
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/506 (40%), Positives = 297/506 (58%), Gaps = 42/506 (8%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
T L+ +Y+ C L A QLF+ + Q+ + W +I
Sbjct: 265 TTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMI------------------------ 300
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
C + +EE R + D +N+ DV + A++ YA+ +C+ A
Sbjct: 301 -----------AGCIRSNRLEEARALF-DSTQNR---DVMIWTAMLSAYAQANCIDQAFN 345
Query: 130 VFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYA 187
+FD++ P++ T+V+++S A AL G+ +H + + R E++ + TALVDMYA
Sbjct: 346 LFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYA 405
Query: 188 KCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVG 246
KCG + A LF + + + WNA+ITG+AMHG+ +ALD+F +M+ + V+P+ ITF+G
Sbjct: 406 KCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIG 465
Query: 247 VLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK 306
+L ACS GL EG+ FE MV + + P ++HY CMVDLLG +G LDEA ++I M +K
Sbjct: 466 LLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIK 525
Query: 307 PDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLR 366
P+ VWGAL+ +C+LH + +L ELA +L+E+EP + G V++SNIYA A W A +R
Sbjct: 526 PNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVR 585
Query: 367 KLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTE 426
K M G+KK S IEV H FL GD SHP I L + ++ EAGYVP T
Sbjct: 586 KTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTS 645
Query: 427 SVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKIT 486
+V +++ +EK + HSE+LA+AFGLI+T T + I KNL++C+DCH A K +SKI
Sbjct: 646 TVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIY 705
Query: 487 EREITVRDVNRYHHFKDGICSCGDYW 512
R I VRD NR+HHF++G CSCGDYW
Sbjct: 706 GRVIIVRDRNRFHHFREGYCSCGDYW 731
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 170/366 (46%), Gaps = 72/366 (19%)
Query: 41 WNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVI 100
WN +I +Y A+ +Y +L ++ DNF P LKAC +S + G+ IH V+
Sbjct: 92 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151
Query: 101 RNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---------------------- 138
+ + DVFVG AL+ MY +C+CV AR VFDK++ERD
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 211
Query: 139 -----------PSEATLVTVISASADIAALPQGRELHGFSWRHRFE--LNVKVKTALVDM 185
PSE +V++++ AD A + G+ +H + R+ + V TAL+DM
Sbjct: 212 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDM 271
Query: 186 YAKCGLVKVARNLFEQLREKRVVSWNAMITG----------------------------- 216
YAKCG + +AR LF L +K VVSW AMI G
Sbjct: 272 YAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAML 331
Query: 217 --YAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
YA +A +LF++M+ V+P +T V +LS C+ G D G+ + S + +
Sbjct: 332 SAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGK-WVHSYIDKERV 390
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
+ T +VD+ G ++ A L ++ + D +W A++ +HG+ E AL+
Sbjct: 391 EVDCILNTALVDMYAKCGDINAAGRLFIEA-ISRDICMWNAIITGFAMHGY---GEEALD 446
Query: 334 KLIELE 339
E+E
Sbjct: 447 IFAEME 452
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 54/93 (58%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+L T LV +Y+ C ++ A +LF R++ +WN +I +A +G E A++++ +
Sbjct: 395 ILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQ 454
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVI 100
G+ P++ TF L ACS + EG+++ E ++
Sbjct: 455 GVKPNDITFIGLLHACSHAGLVTEGKKLFEKMV 487
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/545 (36%), Positives = 316/545 (57%), Gaps = 35/545 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F ++ ++A V Y+ C L A ++F I + + WN LI +A + ++++ +
Sbjct: 426 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 485
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
++ GL+PD+FT L ACS L ++ G+ +H +IRN E D+FV +++ +Y C
Sbjct: 486 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 545
Query: 123 CVVNARQVFDKILERD----------------PSEA-----------------TLVTVIS 149
+ + +FD + ++ P A +++ V
Sbjct: 546 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 605
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A + + +L GRE H ++ +H E + + +L+DMYAK G + + +F L+EK S
Sbjct: 606 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 665
Query: 210 WNAMITGYAMHGHSTKALDLFEKMKDEV-QPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WNAMI GY +HG + +A+ LFE+M+ PD +TF+GVL+AC+ GL EG + + M
Sbjct: 666 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 725
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ-MRVKPDPGVWGALLNSCKLHGHVKL 327
+ + P+++HY C++D+LG +G+LD+A ++ + M + D G+W +LL+SC++H ++++
Sbjct: 726 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEM 785
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E KL ELEP NYV+LSN+YA WE V K+R+ M + ++K CSWIE+
Sbjct: 786 GEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNR 845
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K +F+ G+ +EI + LE ++ + GY P T SV HD+ +EK + HSE+
Sbjct: 846 KVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEK 905
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+ +GLI T +GT + + KNL+IC DCH A K ISK+ EREI VRD R+HHFK+G+CS
Sbjct: 906 LALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCS 965
Query: 508 CGDYW 512
CGDYW
Sbjct: 966 CGDYW 970
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 143/285 (50%), Gaps = 41/285 (14%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL T+++ +Y+ C ++ +FD + +NLF WN +I +Y+ N Y+ +E + ++
Sbjct: 121 VLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMIST 180
Query: 68 G-LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
L+PD+FT+P +KAC+ +S + G +H V++ DVFVG AL+ Y V +
Sbjct: 181 TDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTD 240
Query: 127 ARQVFDKILERD-------------------------------------PSEATLVTVIS 149
A Q+FD + ER+ P ATLVTV+
Sbjct: 241 ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLP 300
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A + G+ +HG++ + R + + + AL+DMY+KCG + A+ +F+ K VVS
Sbjct: 301 VCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVS 360
Query: 210 WNAMITGYAMHGHSTKALDLFEKM---KDEVQPDHITFVGVLSAC 251
WN M+ G++ G + D+ +M ++V+ D +T + + C
Sbjct: 361 WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 405
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 177/410 (43%), Gaps = 42/410 (10%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL L+ +YS C C+ NA +F +N+ WN ++ ++ G ++ ++L
Sbjct: 328 VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAG 387
Query: 68 G--LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G + D T A+ C S + + +H ++ ++ + V A + YAKC +
Sbjct: 388 GEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLS 447
Query: 126 NARQVFDKILERD---------------------------------PSEATLVTVISASA 152
A++VF I + P T+ +++SA +
Sbjct: 448 YAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+ +L G+E+HGF R+ E ++ V +++ +Y CG + + LF+ + +K +VSWN
Sbjct: 508 KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNT 567
Query: 213 MITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
+ITGY +G +AL +F +M +Q I+ + V ACS GR ++
Sbjct: 568 VITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK-- 625
Query: 272 HIDPSVQHYTC-MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
H+ C ++D+ +G + ++ + ++ K W A++ +HG K A
Sbjct: 626 HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIHGLAKEAIK 684
Query: 331 ALEKLIEL--EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
E++ P D +L+ EG+ L ++ G+K ++
Sbjct: 685 LFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNL 734
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 147 VISASADIAALPQGRELHGF-SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
++ AS + GR++H S R + + T ++ MYA CG +R +F+ LR K
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEG 260
+ WNA+I+ Y+ + + L+ F +M ++ PDH T+ V+ AC+ G+ D G
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACA--GMSDVG 204
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/506 (40%), Positives = 298/506 (58%), Gaps = 34/506 (6%)
Query: 40 LWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP-DNFTFPFALKACSALSAIEEGRRIHED 98
+WN +IR Y+ + AI LY ++ G+ P +NFTFPF L +C+ LS++E G +H
Sbjct: 1 MWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSH 60
Query: 99 VIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD-------------------- 138
+I++ +E+D+FV ALI +Y+ + AR +FD+ L RD
Sbjct: 61 IIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESA 120
Query: 139 ---------PSEATLVTVISASADIAALPQGREL-HGFSWRHRFELNVKVKTALVDMYAK 188
E TLV V+SA A + A G+ L H + F N + A++DMYAK
Sbjct: 121 LCLFGEMQNSDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAK 180
Query: 189 CGLVKVARNLFEQLRE--KRVVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFV 245
CG + A +F ++ + K +N+MI G A HG A+ +F E + ++PD +TFV
Sbjct: 181 CGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFV 240
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
GVL AC GL +EG+ FESM Y I P ++HY CMVDLLG G L+EA DL+ +M
Sbjct: 241 GVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPF 300
Query: 306 KPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKL 365
+ + +W ALL++C+ HG+VK+ E+A +KL+E+E YV+LSNI A A WE ++
Sbjct: 301 EANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQV 360
Query: 366 RKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGT 425
RK+M D GI+K S+IE+ H F++ D SHP EI LK + R+K AGYVP T
Sbjct: 361 RKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNT 420
Query: 426 ESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKI 485
V D++ +EK +++ HSE+LA+AFGL+ + I KNL+IC DCH A K +S+I
Sbjct: 421 AQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLVSEI 480
Query: 486 TEREITVRDVNRYHHFKDGICSCGDY 511
REITVRD R+HHF++G CSC D+
Sbjct: 481 YGREITVRDTMRFHHFRNGSCSCMDF 506
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 138/314 (43%), Gaps = 40/314 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+HLYS L+ A LFD R+L +N +I+ YA E A+ L+
Sbjct: 65 GFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLF 124
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK-WETDVFVGAALIDMYAK 120
+ D T L AC+ L A + G+R++ I N + + + AA++DMYAK
Sbjct: 125 GEMQN----SDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAK 180
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFS------WRHRFEL 174
C + +A ++F ++ + T ++ IA L Q HG +R
Sbjct: 181 CGSIDSALEIFRRV------GKNMKTGFVFNSMIAGLAQ----HGLGETAITVFRELIST 230
Query: 175 NVKV-KTALVDMYAKC---GLVKVARNLFEQLR-----EKRVVSWNAMITGYAMHGHSTK 225
+K + V + C GL++ + LFE + + ++ + M+ +G +
Sbjct: 231 GLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEE 290
Query: 226 ALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQH---YTC 282
A DL +KM E + + + +LSAC G G + + + ++ QH Y
Sbjct: 291 AYDLVQKMPFEA--NSVIWRALLSACRTHGNVKIGEIAGQKL-----LEMEAQHGARYVL 343
Query: 283 MVDLLGHSGRLDEA 296
+ ++L + + +EA
Sbjct: 344 LSNILADANQWEEA 357
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/534 (37%), Positives = 320/534 (59%), Gaps = 34/534 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
++ Y L +A LFD +P RN+ WN ++ E A+ L+ R+ E+ +PD
Sbjct: 141 MIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPD 200
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV-- 130
++ L+ C+ L A+ G+++H V++ +E ++ VG +L MY K + + +V
Sbjct: 201 EYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVIN 260
Query: 131 ----------------------FDKILER---------DPSEATLVTVISASADIAALPQ 159
F+ +L++ P + T V+VIS+ +++A L Q
Sbjct: 261 WMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQ 320
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G+++H + + V V ++LV MY++CG ++ + F + +E+ VV W++MI Y
Sbjct: 321 GKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLWSSMIAAYGF 380
Query: 220 HGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
HG +A+ LF +M+ E P + ITF+ +L ACS GL D+G F+ MV+ Y + +Q
Sbjct: 381 HGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQ 440
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
HYTC+VDLLG SG L+EA +I M VK D +W LL++CK+H + ++A ++++ +
Sbjct: 441 HYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIARRVADEVLRI 500
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDAS 398
+P D+ +YV+L+NIY+ A W+ V+++R+ M D+ +KK SW+EVKN+ H F GD
Sbjct: 501 DPQDSASYVLLANIYSSANRWQNVSEVRRAMKDKMVKKEPGISWVEVKNQVHQFHMGDEC 560
Query: 399 HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTP 458
HP EI L+ L +K GYVP T SV HD++N+EK ++ HSE+LAIAF L+NTP
Sbjct: 561 HPKHVEINQYLEELTSEIKRQGYVPDTSSVLHDMDNEEKEQILRHHSEKLAIAFALMNTP 620
Query: 459 DGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+G + + KNL++C DCH+AIK+IS+I + EI VRD +R+HHFK+G CSCGDYW
Sbjct: 621 EGVPIRVMKNLRVCSDCHVAIKYISEIKKLEIIVRDSSRFHHFKNGTCSCGDYW 674
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 149/325 (45%), Gaps = 28/325 (8%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + V+ L H+Y +H+ ++ + +P +L WN L+ A G +E ++ Y
Sbjct: 231 GFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQY 290
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G PD TF + +CS L+ + +G++IH + ++ ++V V ++L+ MY++C
Sbjct: 291 CMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRC 350
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAAL---PQGRE-LHGFSWRHRFELNVK 177
C+ ++ + F + ERD V+ S+ IAA QG E + F+ + L
Sbjct: 351 GCLQDSIKTFLECKERD--------VVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGN 402
Query: 178 VKTALVDMYA--KCGLVKVARNLFEQLREK-----RVVSWNAMITGYAMHGHSTKALDLF 230
T L +YA CGL LF+ + +K R+ + ++ G +A +
Sbjct: 403 EITFLSLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMI 462
Query: 231 EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS-VQHYTCMVDLLGH 289
M V+ D I + +LSAC + R + ++R IDP Y + ++
Sbjct: 463 RSMP--VKADAIIWKTLLSACKIHKNAEIARRVADEVLR---IDPQDSASYVLLANIYSS 517
Query: 290 SGRLDEACDLIMQMR---VKPDPGV 311
+ R ++ M+ VK +PG+
Sbjct: 518 ANRWQNVSEVRRAMKDKMVKKEPGI 542
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 99/241 (41%), Gaps = 51/241 (21%)
Query: 35 QRNLFLWNVL-IRAYAWNGPYEVAIELYYRLLEIGLVPDNFT------------FPFALK 81
Q ++F ++ + + + NG + E + L G + + F F L+
Sbjct: 18 QNSIFRFSTISFKTHFQNGRFSDGNEQFATLCSKGHIREAFESFLSEIWAEPRLFSNLLQ 77
Query: 82 ACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSE 141
AC L ++ G+++H + + +D F+ L+++Y+K + A +FD++ R
Sbjct: 78 ACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRR---- 133
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
N+ ++ Y G ++ A+NLF++
Sbjct: 134 ---------------------------------NIMSCNIMIKAYLGMGNLESAKNLFDE 160
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEG 260
+ ++ V +WNAM+TG + +AL LF +M + PD + VL C+ G G
Sbjct: 161 MPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAG 220
Query: 261 R 261
+
Sbjct: 221 Q 221
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Query: 128 RQVFDKILERDPSEATLVT-VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
R+ F+ L +E L + ++ A + ++ G++LH + + + L+++Y
Sbjct: 55 REAFESFLSEIWAEPRLFSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLY 114
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVG 246
+K G ++ A LF+++ + ++S N MI Y G+ A +LF++M D + T+
Sbjct: 115 SKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDR---NVATWNA 171
Query: 247 VLSACSRGGLFDEGRMFFESM 267
+++ ++ + +E + F M
Sbjct: 172 MVTGLTKFEMNEEALLLFSRM 192
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/504 (39%), Positives = 309/504 (61%), Gaps = 8/504 (1%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L ++Y+ C L A LFDR+ +N+ WN +I Y NG E +L+ + GL+PD
Sbjct: 196 LTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPD 255
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
T L A I+E + ++ E D ++ A+ +A +F
Sbjct: 256 QVTISNILSAYFQCGYIDEACKTFREIK----EKDKVCWTTMMVGCAQNGKEEDALLLFR 311
Query: 133 KILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCG 190
++L + P T+ +V+S+ A +A+L QG+ +HG + + ++ V +ALVDMY+KCG
Sbjct: 312 EMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCG 371
Query: 191 LVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLS 249
A +F+++ + V+SWN+MI GYA +G +AL L+E+M E ++PD+ITFVGVLS
Sbjct: 372 ETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLS 431
Query: 250 ACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
AC GL + G+ +F S+ + + ++P+ HY+CM++LLG +G +D+A DLI M +P+
Sbjct: 432 ACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNC 491
Query: 310 GVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLM 369
+W LL+ C+++ V E+A L EL+PH+AG Y++LSNIYA W+ VA +R LM
Sbjct: 492 LIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLM 551
Query: 370 IDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVF 429
+ IKK A SWIE+ N+ H F++ D +H ++IY +L L +++E+G+ P T V
Sbjct: 552 KNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQESGFTPDTNLVL 611
Query: 430 HDVENDEKANMICCHSERLAIAFGLINTPDG-TRLLITKNLKICDDCHIAIKFISKITER 488
HDV +EK + IC HSE+LA+AF LI P G T + I KN+++C DCH+ +KF+SKI R
Sbjct: 612 HDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMKNIRVCGDCHVFMKFVSKIIRR 671
Query: 489 EITVRDVNRYHHFKDGICSCGDYW 512
I +RD+NR+HHF +G CSC D W
Sbjct: 672 PIILRDINRFHHFIEGRCSCKDSW 695
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 150/318 (47%), Gaps = 52/318 (16%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L +L+HLY+ L +A LFD++ +R++F WN ++ AY+ +G E
Sbjct: 60 LQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVE------------- 106
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L A+ + +H+ V N +I ++ C A
Sbjct: 107 ----------------DLRAVFDQMSVHDAVSYN----------TVIAGFSGNGCSSQAL 140
Query: 129 QVFDKILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
+ F ++ E + ++ T V+V+ A + + + +G+++HG +V V AL +MY
Sbjct: 141 EFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMY 200
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFV 245
AKCG + AR LF+++ K VVSWN+MI+GY +G LF +M+ + PD +T
Sbjct: 201 AKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTIS 260
Query: 246 GVLSACSRGGLFDEG-RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM- 303
+LSA + G DE + F E +D +T M+ +G+ ++A L +M
Sbjct: 261 NILSAYFQCGYIDEACKTFREIKEKDKVC------WTTMMVGCAQNGKEEDALLLFREML 314
Query: 304 --RVKPDPGVWGALLNSC 319
V+PD ++++SC
Sbjct: 315 LENVRPDNFTISSVVSSC 332
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/538 (37%), Positives = 306/538 (56%), Gaps = 35/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++T L+ YS C+ A LF+R +L WN ++ Y + ++L+ + + G
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
D+FT K C L AI +G+++H I++ ++ D++V + ++DMY KC + A+
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 572
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
FD I D P E T+ T+ AS+ +
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLT 632
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL QGR++H + + + V T+LVDMYAKCG + A LF+++ + +WNAM+
Sbjct: 633 ALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLV 692
Query: 216 GYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G A HG + L LF++MK ++PD +TF+GVLSACS GL E SM DY I
Sbjct: 693 GLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIK 752
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY+C+ D LG +G + +A +LI M ++ ++ LL +C++ G + + K
Sbjct: 753 PEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATK 812
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L+ELEP D+ YV+LSN+YA A+ W+ + R +M +KK SWIEVKNK H F+
Sbjct: 813 LLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVV 872
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
D S+ + IY K+K + +K+ GYVP T+ DVE +EK + HSE+LA+AFGL
Sbjct: 873 DDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGL 932
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++TP T + + KNL++C DCH A+K+I+K+ REI +RD NR+H FKDGICSCGDYW
Sbjct: 933 LSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 184/415 (44%), Gaps = 40/415 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G ++ L+++Y A +FD + +R+L WN +I A NG A+ L
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 61 YYRLLEIGLVPDNFTFPFALKACSAL-SAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
+ +LL GL PD +T LKA S+L + +++H I+ +D FV ALID Y+
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 120 KCSCVVNARQVFDK-----------------------------ILERDPSEA---TLVTV 147
+ C+ A +F++ ++ + + TL TV
Sbjct: 464 RNRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATV 523
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A+ QG+++H ++ + ++L++ V + ++DMY KCG + A+ F+ +
Sbjct: 524 FKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD 583
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V+W MI+G +G +A +F +M+ V PD T + A S ++GR +
Sbjct: 584 VAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHAN 643
Query: 267 MVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
++ + DP V T +VD+ G +D+A L ++ + + W A+L HG
Sbjct: 644 ALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHGEG 700
Query: 326 K--LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
K L K + ++P +LS E +R + D GIK I
Sbjct: 701 KETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEI 755
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 145/324 (44%), Gaps = 28/324 (8%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ +++ ++ +Y C + A FD IP + W +I NG E A ++
Sbjct: 547 GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVF 606
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ +G++PD FT KA S L+A+E+GR+IH + ++ D FVG +L+DMYAKC
Sbjct: 607 SQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKC 666
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQ---GRELHGFSWRHRFELNVKV 178
+ +A +F +I ++ + + +A + L Q G+E ++ L +K
Sbjct: 667 GSIDDAYCLFKRI--------EMMNITAWNAMLVGLAQHGEGKETLQL-FKQMKSLGIKP 717
Query: 179 -KTALVDMYAKCGLVKVARNLFEQLR--------EKRVVSWNAMITGYAMHGHSTKALDL 229
K + + + C + ++ +R + + ++ + G +A +L
Sbjct: 718 DKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENL 777
Query: 230 FEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGH 289
E M E + +L+AC G + G+ ++ +D S Y + ++
Sbjct: 778 IESMSMEASAS--MYRTLLAACRVQGDTETGKRVATKLLELEPLDSSA--YVLLSNMYAA 833
Query: 290 SGRLDE---ACDLIMQMRVKPDPG 310
+ + DE A ++ +VK DPG
Sbjct: 834 ASKWDEMKLARTMMKGHKVKKDPG 857
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 125/264 (47%), Gaps = 22/264 (8%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G +A LV++Y + LF+ +P R++ LWN++++AY G E AI+L
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 61 YYRLLEIGLVPDNFTFPFALK---------ACSALSAIEEGRRIHEDVIRNKWETDVFVG 111
GL P+ T + + + + + E + RNK ++ ++
Sbjct: 234 SSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSE-YLH 292
Query: 112 AALIDMYAKCSCVVNARQVFDKILERDPS--EATLVTVISASADIAALPQGRELHGFSWR 169
+ KC F ++E D + T + +++ + + +L G+++H + +
Sbjct: 293 SGQYSALLKC---------FADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
+L + V +L++MY K AR +F+ + E+ ++SWN++I G A +G +A+ L
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 230 F-EKMKDEVQPDHITFVGVLSACS 252
F + ++ ++PD T VL A S
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 106/252 (42%), Gaps = 13/252 (5%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIE------LYY 62
L L+ +YS C L A ++FD++P R+L WN ++ AYA + E +E L +
Sbjct: 76 LINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSS--ECVVENIQQAFLLF 133
Query: 63 RLLEIGLV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+L +V T LK C + H + + D FV AL+++Y K
Sbjct: 134 RILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKF 193
Query: 122 SCVVNARQVFDKILERDPS--EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
V + +F+++ RD L + A+ H S + E+ +++
Sbjct: 194 GKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHS-SGLNPNEITLRLL 252
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQ 238
+ + G VK N + ++ N ++ Y G + L F M + +V+
Sbjct: 253 ARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVE 312
Query: 239 PDHITFVGVLSA 250
D +TF+ +L+
Sbjct: 313 CDQVTFILMLAT 324
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 39/192 (20%)
Query: 92 GRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------------- 138
G+ H ++ + + F+ LI MY+KC + AR+VFDK+ +RD
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 139 -------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFE 173
S TL ++ + HG++ + +
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD 177
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
+ V ALV++Y K G VK + LFE++ + VV WN M+ Y G +A+DL
Sbjct: 178 GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 237
Query: 234 KDE-VQPDHITF 244
+ P+ IT
Sbjct: 238 HSSGLNPNEITL 249
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/545 (36%), Positives = 316/545 (57%), Gaps = 35/545 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F ++ ++A V Y+ C L A ++F I + + WN LI +A + ++++ +
Sbjct: 176 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 235
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
++ GL+PD+FT L ACS L ++ G+ +H +IRN E D+FV +++ +Y C
Sbjct: 236 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 295
Query: 123 CVVNARQVFDKILERD----------------PSEA-----------------TLVTVIS 149
+ + +FD + ++ P A +++ V
Sbjct: 296 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 355
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A + + +L GRE H ++ +H E + + +L+DMYAK G + + +F L+EK S
Sbjct: 356 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 415
Query: 210 WNAMITGYAMHGHSTKALDLFEKMKDEV-QPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WNAMI GY +HG + +A+ LFE+M+ PD +TF+GVL+AC+ GL EG + + M
Sbjct: 416 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 475
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ-MRVKPDPGVWGALLNSCKLHGHVKL 327
+ + P+++HY C++D+LG +G+LD+A ++ + M + D G+W +LL+SC++H ++++
Sbjct: 476 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEM 535
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E KL ELEP NYV+LSN+YA WE V K+R+ M + ++K CSWIE+
Sbjct: 536 GEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNR 595
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K +F+ G+ +EI + LE ++ + GY P T SV HD+ +EK + HSE+
Sbjct: 596 KVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEK 655
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+ +GLI T +GT + + KNL+IC DCH A K ISK+ EREI VRD R+HHFK+G+CS
Sbjct: 656 LALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCS 715
Query: 508 CGDYW 512
CGDYW
Sbjct: 716 CGDYW 720
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 133/298 (44%), Gaps = 41/298 (13%)
Query: 36 RNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI----GLVPDNFTFPFALKACSALSAIEE 91
RN WN +IR ++ NG E + L ++E +PD T L C+ I
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 92 GRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD-PSEATLVTVISA 150
G+ +H ++ + + ++ + AL+DMY+KC C+ NA+ +F ++ S T+V SA
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120
Query: 151 SADI----------------------------------AALPQGRELHGFSWRHRFELNV 176
D + LP +ELH +S + F N
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-D 235
V A V YAKCG + A+ +F +R K V SWNA+I G+A +LD +MK
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 240
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
+ PD T +LSACS+ G+ ++R++ ++ + Y ++ L H G L
Sbjct: 241 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVYLSVLSLYIHCGEL 297
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 177/410 (43%), Gaps = 42/410 (10%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL L+ +YS C C+ NA +F +N+ WN ++ ++ G ++ ++L
Sbjct: 78 VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAG 137
Query: 68 G--LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G + D T A+ C S + + +H ++ ++ + V A + YAKC +
Sbjct: 138 GEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLS 197
Query: 126 NARQVFDKILERD---------------------------------PSEATLVTVISASA 152
A++VF I + P T+ +++SA +
Sbjct: 198 YAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 257
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+ +L G+E+HGF R+ E ++ V +++ +Y CG + + LF+ + +K +VSWN
Sbjct: 258 KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNT 317
Query: 213 MITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
+ITGY +G +AL +F +M +Q I+ + V ACS GR ++
Sbjct: 318 VITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK-- 375
Query: 272 HIDPSVQHYTC-MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
H+ C ++D+ +G + ++ + ++ K W A++ +HG K A
Sbjct: 376 HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIHGLAKEAIK 434
Query: 331 ALEKLIEL--EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
E++ P D +L+ EG+ L ++ G+K ++
Sbjct: 435 LFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNL 484
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/504 (40%), Positives = 298/504 (59%), Gaps = 13/504 (2%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ ++ + A LF +P++N W+ +I Y +G E A ELY + +V +
Sbjct: 173 LISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVE 232
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
+K +E RI + + ++N + ++I Y + + +VF
Sbjct: 233 TAMLTGYMK----FGKVELAERIFQRMAVKN-----LVTWNSMIAGYVENCRAEDGLKVF 283
Query: 132 DKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC 189
++E P+ +L +V+ ++++ALP GR++H + + T+L+ MY KC
Sbjct: 284 KTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKC 343
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVL 248
G + A LF ++ K V+SWNAMI+GYA HG KAL LF+KM++ ++PD ITFV V+
Sbjct: 344 GDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVI 403
Query: 249 SACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPD 308
AC+ G D G +F+SM +++ I+ HYTC++DLLG +GRLDEA LI +M KP
Sbjct: 404 LACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPH 463
Query: 309 PGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKL 368
++G LL +C++H ++ LAE A L+ L+P A YV L+NIYA W+ VAK+RK+
Sbjct: 464 AAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKM 523
Query: 369 MIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESV 428
M + + K SWIE+K+ H F S D HP I+ KL L+G+MK AGYVP E
Sbjct: 524 MKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFA 583
Query: 429 FHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITER 488
HDVE + K ++ HSE+LAIAFGL+ T GT + + KNL++C DCH AIKFIS I +R
Sbjct: 584 LHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKR 643
Query: 489 EITVRDVNRYHHFKDGICSCGDYW 512
EI VRD R+HHF++G CSCGDYW
Sbjct: 644 EIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 138/345 (40%), Gaps = 57/345 (16%)
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDV-IRNK--WETDVFVGAALIDMYAKCSCVV 125
+V N T ++AC +E R + E + +R W T ++ Y K + V
Sbjct: 73 VVSLNKTIASFVRACD----LESARNVFEKMSVRTTVTWNT-------MLSGYTKVAGKV 121
Query: 126 N-ARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK----- 179
A ++FDKI E D S S +I + R +G F + VK
Sbjct: 122 KEAHELFDKIPEPD----------SVSYNIMLVCYLRS-YGVEAALAFFNKMPVKDIASW 170
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP 239
L+ +A+ G ++ A +LF + EK VSW+AMI+GY HG A +L+ K+
Sbjct: 171 NTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELY---KNVGMK 227
Query: 240 DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
+ +L+ + G + F+ M ++ + M+ + R ++ +
Sbjct: 228 SVVVETAMLTGYMKFGKVELAERIFQRMAVK-----NLVTWNSMIAGYVENCRAEDGLKV 282
Query: 300 IMQM---RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEP--HDAGNYVILSNIYA 354
M RV+P+P ++L C + L + +L+ P D L ++Y
Sbjct: 283 FKTMIESRVRPNPLSLSSVLLGCSNLSALPLGR-QMHQLVSKSPLSKDTTACTSLISMYC 341
Query: 355 RAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASH 399
+ + + KL M + + SW +A +SG A H
Sbjct: 342 KCGDLDSAWKLFLEMPRKDV-----ISW-------NAMISGYAQH 374
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/561 (36%), Positives = 309/561 (55%), Gaps = 66/561 (11%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
++ Y + + A LF+R+P RN W +I YA NG E A+ L G++P
Sbjct: 358 MITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPS 417
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+ + ACS + A+E G+++H ++ + + +V ALI +Y K + + RQ+FD
Sbjct: 418 LSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFD 477
Query: 133 KILERD-----------------------------PSEATLVTVISA------------- 150
++ +D P + T+ISA
Sbjct: 478 RMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEI 537
Query: 151 ----------------------SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
S ++ A G+++H + + + + V ALV MY K
Sbjct: 538 FRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFK 597
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGV 247
C + +F+ + E+ + +WN +ITGYA HG +A+ +++ M V P+ +TFVG+
Sbjct: 598 CSSADSLK-VFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGL 656
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
L ACS GL DEG FF+SM DY + P ++HY CMVDLLG +G + A I M ++P
Sbjct: 657 LHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEP 716
Query: 308 DPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRK 367
D +W ALL +CK+H +V++ A EKL +EP +AGNYV+LSNIY+ W+ VAK+RK
Sbjct: 717 DSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRK 776
Query: 368 LMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTES 427
LM +RG+ K CSW+++KNK H+F++GD H IYA L L +K GYVP T+
Sbjct: 777 LMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKATGYVPDTDF 836
Query: 428 VFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITE 487
V HD++ ++K + + HSE+LA+A+GL+ TP G + I KNL+IC DCH IKF+S +T+
Sbjct: 837 VLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSSVTK 896
Query: 488 REITVRDVNRYHHFKDGICSC 508
REI VRD NR+HHF++G CSC
Sbjct: 897 REIDVRDGNRFHHFRNGSCSC 917
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 128/256 (50%), Gaps = 14/256 (5%)
Query: 17 YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTF 76
Y + A LF+R+P+RN W V+I Y + A +++ +L G+ P+
Sbjct: 167 YCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNL 226
Query: 77 PFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK-CSCVVNARQVFDKIL 135
L A L IH V + +E DV VG A+++ Y K + + +A + F+ +
Sbjct: 227 VSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMA 286
Query: 136 ERDPSEATLVTVISASADIAALPQ-GRELHGFSWRHRFEL-NVKVKTALVDMYAKCGLVK 193
R+ E T T+I AAL Q GR F+ R L +V +T+++ A+ G +
Sbjct: 287 ARN--EYTWSTII------AALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRID 338
Query: 194 VARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSR 253
A+ LF+Q+ E VVSWNAMITGY + +A DLF +M + I++ G+++ +R
Sbjct: 339 DAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFR---NTISWAGMIAGYAR 395
Query: 254 GGLFDEGRMFFESMVR 269
G ++ + +++ R
Sbjct: 396 NGRSEQALVSLQALHR 411
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 143/355 (40%), Gaps = 94/355 (26%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
LH A ++FD +P R++ WN +I AY NG +PD
Sbjct: 49 LHEAREVFDSMPFRDIIAWNSMIFAYCNNG-----------------MPD---------- 81
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP-SE 141
GR + + + T G L+ YA+ V +AR+VFD + R+ +
Sbjct: 82 --------AGRSLADAISGGNLRT----GTILLSGYARAGRVRDARRVFDGMGVRNTVAW 129
Query: 142 ATLVTVISASADIA-------ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV 194
+VT + DI A+P R++ SW ++ Y L++
Sbjct: 130 NAMVTCYVQNGDITLARKLFDAMPS-RDVS--SW-----------NTMLTGYCHSQLMEE 175
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSAC-- 251
ARNLFE++ E+ VSW MI+GY + +A D+F M E + P+ V VLSA
Sbjct: 176 ARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRH 235
Query: 252 -SRGGLFDE----------------GRMFFESMVRDYH-IDPSVQHYTCM---------- 283
+ G+ + G +D + +D +V+ + M
Sbjct: 236 LGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWST 295
Query: 284 -VDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+ L +GR+D+A + + +K P ++L +G + A++ +++ E
Sbjct: 296 IIAALSQAGRIDDAFAVYQRDPLKSVPSR-TSMLTGLARYGRIDDAKILFDQIHE 349
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 144/331 (43%), Gaps = 24/331 (7%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
T L+ Y+ + +A ++FD + RN WN ++ Y NG I L +L +
Sbjct: 98 GTILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGD----ITLARKLFDAMP 153
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVI-RNKWETDVFV-GAALIDMYAKCSCVVNA 127
D ++ L +EE R + E + RN V + G LI+ + + A
Sbjct: 154 SRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGR------A 207
Query: 128 RQVFDKIL--ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
+F +L P + LV+V+SA + +H + FE +V V TA+++
Sbjct: 208 WDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNG 267
Query: 186 YAK-CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITF 244
Y K ++ A FE + + +W+ +I + G A ++++ + P +
Sbjct: 268 YTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTS- 326
Query: 245 VGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
+L+ +R G D+ ++ F+ + H +P+V + M+ + +DEA DL +M
Sbjct: 327 --MLTGLARYGRIDDAKILFDQI----H-EPNVVSWNAMITGYMQNEMVDEAEDLFNRMP 379
Query: 305 VKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+ + W ++ +G + A ++L+ L
Sbjct: 380 FR-NTISWAGMIAGYARNGRSEQALVSLQAL 409
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G V+A LV +Y C ++ ++FD + +R++F WN +I YA +G AI +
Sbjct: 579 LGMDSGLVVANALVSMYFKCSSA-DSLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRM 637
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG-AALIDMYA 119
Y ++ G++P+ TF L ACS ++EG + + + + T + A ++D+
Sbjct: 638 YQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLG 697
Query: 120 KCSCVVNARQ-VFDKILERD 138
+ V A ++D +E D
Sbjct: 698 RAGDVQGAEHFIYDMPIEPD 717
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/518 (38%), Positives = 315/518 (60%), Gaps = 37/518 (7%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWN-GPYEVAIELYYRLLEIGLV-PDNFTFPFALKAC 83
A +LF +I + N+F WN +IR + + P + + L+ +++ G P+ FT F LKAC
Sbjct: 112 ARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKAC 171
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD----- 138
S +SA+EEG+++H +V+++ + + FV AL++ YAKC +V A +VFD+I +R+
Sbjct: 172 SIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWS 231
Query: 139 ----------------------------PSEATLVTVISASADIAALPQGRELHGFSWRH 170
P E T+V+VISA A AL G+ +H + +
Sbjct: 232 TMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQ 291
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
E ++++ TALV+MYAKCG ++ A+ +F+ + K +W++MI G A++G + AL+ F
Sbjct: 292 LIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEF 351
Query: 231 EKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGH 289
+M++ +V+P+H+TF+GVLSAC+ GL EGR ++ SM+ ++ I PS++ Y CMVDLL
Sbjct: 352 FRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSML-EFGIVPSMELYGCMVDLLCR 410
Query: 290 SGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVIL 349
+ +++AC L+ M + P+P +W LL CK ++ +E+ ++L+ELEPH+A NY++L
Sbjct: 411 ASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEPHNAENYILL 470
Query: 350 SNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKL 409
SN+YA + WE ++++RK M GIK CS IEV H F+ GD SHP E+ L
Sbjct: 471 SNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREIL 530
Query: 410 KWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNL 469
+ + R+ G+ PG V H+V ++EK N +C HSERLAIA+GL+ T + I KNL
Sbjct: 531 RDISKRVHAVGHQPGISDVLHNVVDEEKENALCEHSERLAIAYGLLKTKTPMAIRIVKNL 590
Query: 470 KICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
++C DCH K IS REI VRD R+H F +G CS
Sbjct: 591 RVCGDCHEVTKIISAEYRREIIVRDRVRFHKFVNGSCS 628
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 116/253 (45%), Gaps = 42/253 (16%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG P + T LV+ Y+ C+ + A ++FD I RNL W+ +I YA G A+ L+
Sbjct: 191 GFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLF 250
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + G+VPD T + AC+A A++ G+ +H + + ETD+ + AL++MYAKC
Sbjct: 251 RDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKC 310
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
C+ A++VFD + +D P+ T + V+
Sbjct: 311 GCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVL 370
Query: 149 SASADIAALPQGRELHGFSWRHRFELNV----KVKTALVDMYAKCGLVKVARNLFEQLR- 203
SA A + +GR W E + ++ +VD+ + LV+ A L E +
Sbjct: 371 SACAHSGLVSEGRRY----WSSMLEFGIVPSMELYGCMVDLLCRASLVEDACTLVETMPI 426
Query: 204 EKRVVSWNAMITG 216
V W ++ G
Sbjct: 427 SPNPVIWRTLLVG 439
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 81/204 (39%), Gaps = 42/204 (20%)
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAKCGL-----VKVARNLFEQLREKRVVSWNAMIT 215
R++H H ++ + L + C L + AR LF Q++ + SWN+MI
Sbjct: 74 RQIHARLLTHAMPIS-SISFGLCKIIGFCALSPYGDIDYARKLFSQIQRPNIFSWNSMIR 132
Query: 216 GYAMHGHSTK-ALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRM---------- 262
G + +K + LF KM + P+ T VL ACS +EG+
Sbjct: 133 GCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLKSGF 192
Query: 263 ----FFESMVRDYH----------------IDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
F E+ + +++ D ++ ++ M+ G ++EA L
Sbjct: 193 GSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRD 252
Query: 303 MR---VKPDPGVWGALLNSCKLHG 323
M+ V PD +++++C G
Sbjct: 253 MQKAGVVPDEVTMVSVISACAASG 276
>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/545 (36%), Positives = 313/545 (57%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G H + LV++YS C A ++ D +P +L +++ + Y G ++ E+
Sbjct: 166 GLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGAEVL 225
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+ + LV DN T+ L+ CS L + R+IH ++R + ++V A+I+MY KC
Sbjct: 226 RRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKC 285
Query: 122 SCVVNARQVFDKI---------------------------------LERDPSEATLVTVI 148
V+ A++VFD E P+E T +
Sbjct: 286 GKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISL 345
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
++ A+++ L G LHG + + +V V ALV+MYAK G ++ AR F + + +V
Sbjct: 346 NSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIV 405
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WN MI G++ HG + L+ F++M + P+ ITF+GVL ACS G ++G +F +
Sbjct: 406 TWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQL 465
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
++ +++ P +QHYTC+V LL +G +A D + ++ D W ALLN+C + + +L
Sbjct: 466 MKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRALLNACYVRRNFRL 525
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
+ E I P+D+G YV+LSNI+A++ WEGVA++R LM RG+KK SWI ++N
Sbjct: 526 GKKVAEYAIYKYPNDSGVYVLLSNIHAKSREWEGVAEVRSLMNKRGVKKEPGVSWIGIRN 585
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ H FL+ + HP IYAK+K + +++ GY P VFHDV+ +++ + + HSE+
Sbjct: 586 QTHVFLAEENQHPEITLIYAKIKEVLSKIRPLGYSPDVAGVFHDVDEEQREDNLSYHSEK 645
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+A+GL+ TP+ + L +TKN++ICDDCH AIK ISKI++R I +RD NR+HHF+DG CS
Sbjct: 646 LAVAYGLMKTPENSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFRDGQCS 705
Query: 508 CGDYW 512
C DYW
Sbjct: 706 CCDYW 710
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 147/348 (42%), Gaps = 37/348 (10%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNG-PYEVAIELYYRLLEIGL 69
L++LY C A ++FD +P+RN+ W +++ Y +G +EV +
Sbjct: 73 NSLINLYVKCGETVRARKVFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDES 132
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
P+ F K+CS+ IEEG++ H +++ + FV L+ MY+ CS A +
Sbjct: 133 RPNEFVATVVFKSCSSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIR 192
Query: 130 VFD---------------------------KILERDPSE------ATLVTVISASADIAA 156
V D ++L R E T ++ + +++
Sbjct: 193 VLDDLPYCDLSVFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRD 252
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
L R++H R F V+ A+++MY KCG V A+ +F+ + +V ++
Sbjct: 253 LNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDA 312
Query: 217 YAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
Y +AL+LF KM EV P+ TF L++ + L G + +++ + +
Sbjct: 313 YFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRN- 371
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
V +V++ SG +++A M + D W ++ HG
Sbjct: 372 HVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMICGFSHHG 418
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 144 LVTVISASADIAALPQGRELHG---FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
L ++ A+ + L G +HG + + +V +L+++Y KCG AR +F+
Sbjct: 34 LNELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFD 93
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFD 258
+ E+ VVSW AM+ GY G + L LF+ M DE +P+ V +CS G +
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIE 153
Query: 259 EGRMF 263
EG+ F
Sbjct: 154 EGKQF 158
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 108/266 (40%), Gaps = 44/266 (16%)
Query: 71 PDNFTFPF-----ALKACSALSAIEEGRRIHEDVI---RNKWETDVFVGAALIDMYAKCS 122
P FP LK C+ S + G IH +I ++ DV+ +LI++Y KC
Sbjct: 24 PKKPLFPIDRLNELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCG 83
Query: 123 CVVNARQVFDKILERD----------------------------------PSEATLVTVI 148
V AR+VFD + ER+ P+E V
Sbjct: 84 ETVRARKVFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVF 143
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+ + + +G++ HG + + V+ LV MY+ C A + + L +
Sbjct: 144 KSCSSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLS 203
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+++ ++GY G + ++ +M K+++ D+IT++ L CS + R M
Sbjct: 204 VFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRM 263
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRL 293
VR + V+ ++++ G G++
Sbjct: 264 VR-LGFNSEVEASGAIINMYGKCGKV 288
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/571 (37%), Positives = 310/571 (54%), Gaps = 70/571 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A +L Y+A L + L R + I A++ G A+ L +L G
Sbjct: 325 VAFRLQRAYAASGRLDLSLALLRRTRDPTAIFYTSAIHAHSSRGHRLPALALLSDMLAQG 384
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC------- 121
L+P T +L AC LS GR +H + D +V AL+ MYA+
Sbjct: 385 LLPTAHTLSASLPACRGLS---PGRALHGYAFKLALAGDSYVATALLGMYARAGDATAAR 441
Query: 122 -------------------SCVVN------ARQVFDKILERD------------------ 138
+C + AR +FD + +D
Sbjct: 442 ALFDDMLPDPHVVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPN 501
Query: 139 ---------------PSEATLVTVISASADIAALPQGRELHGF-SWRHRFELNVKVKTAL 182
P E T+V V+SA A + + G+ LH + R +L+V+V TAL
Sbjct: 502 EALRLFRRMLGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTAL 561
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDH 241
+DMY KCG + A ++F + +K +V WNAMI GYAMHG S KAL++F + +++ + P
Sbjct: 562 IDMYCKCGSLGDAVDVFHGIGDKDIVVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTD 621
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
ITF+G+L+ACS G+ +EGR FF+SM R+Y IDP ++HY CMVDLLG +G + EA L+
Sbjct: 622 ITFIGLLNACSHSGMVEEGREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQ 681
Query: 302 QMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEG 361
M++ PD +W +LL +C+LH ++ L + + L+ ++G Y++LSNIYA NW
Sbjct: 682 SMKITPDAVMWVSLLAACRLHKNMSLGQQIADYLVAKGLANSGMYILLSNIYAAVGNWGE 741
Query: 362 VAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGY 421
VA++R +M GI+K CS IE+ + + F++GD SHP DEIY L + G +KE G+
Sbjct: 742 VARVRSMMKASGIQKEPGCSSIEIDREVYEFVAGDMSHPRTDEIYVMLDKMNGLVKEHGH 801
Query: 422 VPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKF 481
VP TE V HD++ K + HSE+LA+AFGLI+T G + I KNL+ C DCH +K
Sbjct: 802 VPQTELVLHDLDEATKEKALAVHSEKLALAFGLISTQPGATIKIVKNLRACSDCHAVLKL 861
Query: 482 ISKITEREITVRDVNRYHHFKDGICSCGDYW 512
IS+IT R+I RD NR+HHF DG CSCGDYW
Sbjct: 862 ISRITGRKIVFRDRNRFHHFVDGSCSCGDYW 892
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 122/263 (46%), Gaps = 32/263 (12%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
H V T ++ Y+ L +A LFD +P ++ WN +I Y +G A+ L+ R+L
Sbjct: 452 HVVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRML 511
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAKCSCV 124
G+ PD T L A + L +E G+ +H V ++ + V VG ALIDMY KC +
Sbjct: 512 GSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSL 571
Query: 125 VNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK----- 179
+A VF I ++D + V + A+ G +HG S R E+ V+ +
Sbjct: 572 GDAVDVFHGIGDKD------IVVWN------AMINGYAMHGDS-RKALEMFVQSREQGLW 618
Query: 180 ------TALVDMYAKCGLVKVARNLFEQLR-----EKRVVSWNAMITGYAMHGHSTKALD 228
L++ + G+V+ R F+ + + ++ + M+ G +A
Sbjct: 619 PTDITFIGLLNACSHSGMVEEGREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFC 678
Query: 229 LFEKMKDEVQPDHITFVGVLSAC 251
L + MK + PD + +V +L+AC
Sbjct: 679 LVQSMK--ITPDAVMWVSLLAAC 699
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/552 (38%), Positives = 312/552 (56%), Gaps = 69/552 (12%)
Query: 30 FDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV-PDNFTFPFALKACSALSA 88
F+++ +R++ WN +I + G A++++ ++L L+ PD FT L AC+ L
Sbjct: 235 FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEK 294
Query: 89 IEEGRRIHEDVIRNKWETDVFVGAALIDMYA----------------------------- 119
+ G++IH ++ ++ V ALI MY+
Sbjct: 295 LCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALL 354
Query: 120 ----KCSCVVNARQVFDKILERD---------------------------------PSEA 142
K + A+ +F + +RD P+
Sbjct: 355 DGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSY 414
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
TL ++S ++ +A+L G+++HG + + +V V AL+ MYAK G + A F+ +
Sbjct: 415 TLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLI 474
Query: 203 R-EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEG 260
R E+ VSW +MI A HGH+ +AL+LFE M E ++PDHIT+VGV SAC+ GL ++G
Sbjct: 475 RCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQG 534
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
R +F+ M I P++ HY CMVDL G +G L EA + I +M ++PD WG+LL++C+
Sbjct: 535 RQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACR 594
Query: 321 LHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIAC 380
+H ++ L ++A E+L+ LEP ++G Y L+N+Y+ WE AK+RK M D +KK
Sbjct: 595 VHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGF 654
Query: 381 SWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANM 440
SWIEVK+K H F D +HP +EIY +K + +K+ GYVP T SV HD+E + K +
Sbjct: 655 SWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQI 714
Query: 441 ICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHH 500
+ HSE+LAIAFGLI+TPD T L I KNL++C+DCH AIKFISK+ REI VRD R+HH
Sbjct: 715 LRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHH 774
Query: 501 FKDGICSCGDYW 512
FKDG CSC DYW
Sbjct: 775 FKDGFCSCRDYW 786
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 169/376 (44%), Gaps = 51/376 (13%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
F ++ VL+ YS + + + FD++PQR+ W +I Y G Y AI +
Sbjct: 80 AFSWNTVLSA-----YSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVM 134
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+++ G+ P FT L + +A +E G+++H +++ +V V +L++MYAKC
Sbjct: 135 GDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC 194
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
+ A+ VFD+++ RD S SW A
Sbjct: 195 GDPMMAKFVFDRMVVRDIS--------------------------SW-----------NA 217
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE--VQP 239
++ ++ + G + +A FEQ+ E+ +V+WN+MI+G+ G+ +ALD+F KM + + P
Sbjct: 218 MIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSP 277
Query: 240 DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
D T VLSAC+ G+ +V D S ++ + G ++ A L
Sbjct: 278 DRFTLASVLSACANLEKLCIGKQIHSHIVTT-GFDISGIVLNALISMYSRCGGVETARRL 336
Query: 300 IMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK--LIELEPHDAGNYVILSNIYARAA 357
I Q R D + G + L G++KL ++ K + L+ D + + Y +
Sbjct: 337 IEQ-RGTKDLKIEGF---TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG 392
Query: 358 NWEGVAKLRKLMIDRG 373
++ L + M+ G
Sbjct: 393 SYGEAINLFRSMVGGG 408
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 145/320 (45%), Gaps = 37/320 (11%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y ++ A +F + R++ W +I Y +G Y AI L+ ++ G
Sbjct: 351 TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR 410
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
P+++T L S+L+++ G++IH +++ V V ALI MYAK + +A +
Sbjct: 411 PNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRA 470
Query: 131 FDKI-LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL------- 182
FD I ERD +S ++ I AL Q HG + + L
Sbjct: 471 FDLIRCERD--------TVSWTSMIIALAQ----HGHAEEALELFETMLMEGLRPDHITY 518
Query: 183 VDMYAKC---GLVKVARNLFEQLRE-----KRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
V +++ C GLV R F+ +++ + + M+ + G +A + EKM
Sbjct: 519 VGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM- 577
Query: 235 DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP-SVQHYTCMVDLLGHSGRL 293
++PD +T+ +LSAC D G++ E ++ ++P + Y+ + +L G+
Sbjct: 578 -PIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLL---LEPENSGAYSALANLYSACGKW 633
Query: 294 DEACDLIMQM---RVKPDPG 310
+EA + M RVK + G
Sbjct: 634 EEAAKIRKSMKDGRVKKEQG 653
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/551 (38%), Positives = 310/551 (56%), Gaps = 51/551 (9%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFL----WNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+V YS L +A LF+R+ + N+ L W +I YA G A++++ ++ + G
Sbjct: 436 MVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCG 495
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIR--------NKWETDVFVGAALIDMYAK 120
P+ T L AC ++ A+ G+ H I+ + D+ V LIDMYAK
Sbjct: 496 SRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAK 555
Query: 121 CSCVVNARQVFDKILERD-------------------------------------PSEAT 143
C AR++FD + +D P++ T
Sbjct: 556 CQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFT 615
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRF-ELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
L + A A +AAL GR++H + R+ + + + V L+DMY+K G V A+ +F+ +
Sbjct: 616 LSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNM 675
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGR 261
++ VSW +++TGY MHG AL +F++M+ + PD ITF+ VL ACS G+ D G
Sbjct: 676 PQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGI 735
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
FF M +D+ +DP +HY CMVDL G +GRL EA LI +M ++P P VW ALL++C+L
Sbjct: 736 NFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRL 795
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
H +V+L E A +L+ELE + G+Y +LSNIYA A W+ VA++R M GIKK CS
Sbjct: 796 HSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCS 855
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMI 441
WI+ + F GD SHP +IY L L R+K GYVP T HDV+++EK +++
Sbjct: 856 WIQGRKGVATFYVGDRSHPQSQQIYETLADLIQRIKAIGYVPQTSFALHDVDDEEKGDLL 915
Query: 442 CCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF 501
HSE+LA+A+G++ + ITKNL+IC DCH AI +ISKI E EI +RD +R+HHF
Sbjct: 916 FEHSEKLALAYGILTLHPRAPIRITKNLRICGDCHSAITYISKIIEHEIILRDSSRFHHF 975
Query: 502 KDGICSCGDYW 512
K+G CSC YW
Sbjct: 976 KNGSCSCKGYW 986
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 156/306 (50%), Gaps = 42/306 (13%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQR--NLFLWNVLIRAYAWNGPYEVAIE 59
G FH LAT L+ Y A + A L +R+P ++F WN LIR G
Sbjct: 188 GLLFH--LATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFT 245
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
LY ++ +G PD++TFPF KAC+ LS++ G +H V R+ + ++VFV A++ MY
Sbjct: 246 LYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYG 305
Query: 120 KCSCVVNARQVFDKILER-------------------------------------DPSEA 142
KC + +A +FD + R P
Sbjct: 306 KCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVI 365
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
+LV ++ A A +AA +GR++HGFS R +V V A+VDMYAKCG ++ A +F+++
Sbjct: 366 SLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRM 425
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR 261
+ K VVSWNAM+TGY+ G AL LFE+M +E ++ D +T+ V++ ++ G E
Sbjct: 426 KFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEAL 485
Query: 262 MFFESM 267
F M
Sbjct: 486 DVFRQM 491
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 153/330 (46%), Gaps = 51/330 (15%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ +V +Y+ C + A+++F R+ +++ WN ++ Y+ G E A+ L+ R+ E
Sbjct: 401 VGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTE-- 458
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
E++ E DV A+I YA+ A
Sbjct: 459 ----------------------------ENI-----ELDVVTWTAVITGYAQRGQGCEAL 485
Query: 129 QVFDKILE--RDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELN--------VKV 178
VF ++ + P+ TLV+++SA + AL G+E H ++ + L+ +KV
Sbjct: 486 DVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKV 545
Query: 179 KTALVDMYAKCGLVKVARNLFEQL--REKRVVSWNAMITGYAMHGHSTKALDLFE---KM 233
L+DMYAKC +VAR +F+ + +++ VV+W MI GYA HG + AL LF KM
Sbjct: 546 INGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKM 605
Query: 234 KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
++P+ T L AC+R GR ++R+++ + C++D+ SG +
Sbjct: 606 DKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDV 665
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
D A ++ + + W +L+ +HG
Sbjct: 666 DTA-QIVFDNMPQRNAVSWTSLMTGYGMHG 694
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 107/248 (43%), Gaps = 28/248 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A L+ +YS + A +FD +PQRN W L+ Y +G E A+ ++ + ++
Sbjct: 651 VANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVP 710
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG------AALIDMYAKCS 122
LVPD TF L ACS ++ G N+ D V A ++D++ +
Sbjct: 711 LVPDGITFLVVLYACSHSGMVDHGINFF-----NRMSKDFGVDPGPEHYACMVDLWGRAG 765
Query: 123 CVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL---NVKVK 179
+ A ++ ++ + +P+ V ++SA L EL F+ EL N
Sbjct: 766 RLGEAMKLINE-MPMEPTPVVWVALLSA----CRLHSNVELGEFAANRLLELESGNDGSY 820
Query: 180 TALVDMYAKCGLVK-VARNLFEQ----LREKRVVSW----NAMITGYAMHGHSTKALDLF 230
T L ++YA K VAR + ++++ SW + T Y ++ ++
Sbjct: 821 TLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIY 880
Query: 231 EKMKDEVQ 238
E + D +Q
Sbjct: 881 ETLADLIQ 888
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/479 (40%), Positives = 289/479 (60%), Gaps = 35/479 (7%)
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L PD T + AC+ L +E G+ +H + ++ V A++DMY KC + +A+
Sbjct: 7 LRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQ 66
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+VF++I E+D P E TLV V+SA A
Sbjct: 67 EVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTG 126
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL QG+ +H + ++ ++TALVDMYAKCG + +A +F ++R + V +WNAMI
Sbjct: 127 ALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIG 186
Query: 216 GYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G AMHGH A+ LF++M+ D++ PD +TF+ +L ACS GL DEG F++M + I+
Sbjct: 187 GLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIE 246
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY C+VDLL + ++D+A I M +K + +W LL +C+ GH LAE +
Sbjct: 247 PRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIXRR 306
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
+IELEP G YV+LSN+YA + W+ KLRK M ++GI+K+ CSWIE+ H F++
Sbjct: 307 VIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVA 366
Query: 395 GDASHPNCDEIYAKLKWLEGRMK-EAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD SH ++IYA ++ + R+ + G+VPGT +V D+E +EK + + HSE+LAIA G
Sbjct: 367 GDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALG 426
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LI+TP G+ + I KNL++C+DCH +K SK+ REI RD +R+HHFK+G CSC D+W
Sbjct: 427 LISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 485
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL T LV +Y+ C + A Q+F R+ RN+F WN +I A +G E AI L+ ++
Sbjct: 148 VLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXD 207
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETD 107
L+PD+ TF L ACS ++EG + + ++NK++ +
Sbjct: 208 KLMPDDVTFIALLCACSHAGLVDEGLAMFQ-AMKNKFQIE 246
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/545 (36%), Positives = 310/545 (56%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF ++ L+ +YS L A ++ D I ++++ W +I Y + + A+E +
Sbjct: 375 GFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETF 434
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ PDN A+ AC+ + A+ +G +IH V + + DV + L+ +YA+C
Sbjct: 435 KEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARC 494
Query: 122 SCVVNARQVFDKI----------------------------LERDPSEA-----TLVTVI 148
A F+ I ++ D + A T V+ I
Sbjct: 495 GISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSI 554
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SASA++A + QG+++H + + ++ AL+ +Y KCG ++ A+ F ++ ++ V
Sbjct: 555 SASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEV 614
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWN +IT + HG +ALDLF++MK + ++P +TFVGVL+ACS GL +EG +F+SM
Sbjct: 615 SWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSM 674
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
++ I P HY C+VD+LG +G+LD A + +M + D VW LL++CK+H ++++
Sbjct: 675 SNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEI 734
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E A + L+ELEPHD+ +YV+LSN YA W ++RK+M DRG++K SWIEVKN
Sbjct: 735 GEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKN 794
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
HAF GD HP D+IY L L R+ + GY +FH+ E + K HSE+
Sbjct: 795 VVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIGYKQENYHLFHEKEKEGKDPTAFVHSEK 854
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+AFGL++ P L + KNL++C+DCH +KF S + REI +RDV R+HHF +G CS
Sbjct: 855 LAVAFGLMSLPSCMPLRVIKNLRVCNDCHTWMKFTSGVMGREIVLRDVYRFHHFNNGSCS 914
Query: 508 CGDYW 512
CGDYW
Sbjct: 915 CGDYW 919
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 187/409 (45%), Gaps = 38/409 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G ++ L+ LY + A Q+FD + N+ LWN+++ AY + +++
Sbjct: 274 GMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIF 333
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
YR+L G+ P+ FT+P L+ C+ I G +IH I+N +++D++V LIDMY+K
Sbjct: 334 YRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKY 393
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ A+++ D I E+D P L + I
Sbjct: 394 GWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAI 453
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A I A+ QG ++H + + +V + LV +YA+CG+ K A + FE + K +
Sbjct: 454 SACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGI 513
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WN +I+G+A G +AL +F KM + + TFV +SA + +G+ +
Sbjct: 514 TWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARV 573
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
++ + + + ++ L G G +++A +M K + W ++ C HG
Sbjct: 574 IKTGYTSET-EISNALISLYGKCGSIEDAKMDFFEM-TKRNEVSWNTIITCCSQHGRGLE 631
Query: 328 AELALEKLIE--LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
A +++ + L+P D +L+ EG+ + + + GI
Sbjct: 632 ALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGI 680
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 163/373 (43%), Gaps = 41/373 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + ++ L+ LY+ + A ++F+ + R+ W ++ YA NG E A+ LY
Sbjct: 72 GLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLY 131
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+VP + L AC+ + GR IH V + + ++ FVG ALI +Y +C
Sbjct: 132 REMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRC 191
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
A +VF +L D P T+ +++
Sbjct: 192 RSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLL 251
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A + + L +G++LH + + L+ ++ +L+D+Y K G ++ A +F+ VV
Sbjct: 252 AACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVV 311
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
WN M+ Y K+ D+F +M V+P+ T+ +L C+ G G
Sbjct: 312 LWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLT 371
Query: 268 VRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+++ + D V ++D+ G LD+A I+ M + D W +++ H +
Sbjct: 372 IKNGFQSDMYVS--GVLIDMYSKYGWLDKA-QRILDMIEEKDVVSWTSMIAGYVQH---E 425
Query: 327 LAELALEKLIELE 339
+ ALE E++
Sbjct: 426 FCKEALETFKEMQ 438
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/547 (39%), Positives = 305/547 (55%), Gaps = 44/547 (8%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL L+ +Y+ C A LF RIP N WN +I + G + A+EL+ R+
Sbjct: 359 VLGNALLDMYTRCGSPEEARHLFKRIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLE 417
Query: 68 GLVPDNFTFPFALKACSA----LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
G+ P T+ L+A ++ A+ EGR++H ++ + ++ +G A++ MYA C
Sbjct: 418 GMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGA 477
Query: 124 VVNARQVFDKILERD------------------------------------PSEATLVTV 147
+ A F + D P++ T V V
Sbjct: 478 IDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAV 537
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-EKR 206
+ A A AAL +G +H E N+ V TAL MY +CG ++ AR +FE++ E+
Sbjct: 538 LDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERD 597
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
VV +NAMI Y+ +G + +AL LF +M+ E +PD +FV VLSACS GGL DEG F
Sbjct: 598 VVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFR 657
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
SM + Y I PS HY C VD+LG +G L +A +LI M VKP VW LL +C+ + V
Sbjct: 658 SMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDV 717
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
LA + EL+P D YV+LSNI A A W+ A++R M RG++K SWIE+
Sbjct: 718 DRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEI 777
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
K++ H F++GD SHP +EIY +L+ L ++E GYVP T V V+ EK ++C HS
Sbjct: 778 KSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHS 837
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
ERLAIA G++++ T + + KNL++C+DCH A KFISKI +EI VRD +R+HHF DG
Sbjct: 838 ERLAIALGVMSSSTDT-VRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGS 896
Query: 506 CSCGDYW 512
CSCGDYW
Sbjct: 897 CSCGDYW 903
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 178/365 (48%), Gaps = 45/365 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G VLA L+H+Y +C C+ +A LF+++ +R+L WN I A A +G +A+EL+
Sbjct: 158 GLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGIALELF 216
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+ G+ P T AL C+ I + + IH V + E + V AL YA+
Sbjct: 217 QRMQLEGVRPARITLVIALTVCAT---IRQAQAIHFIVRESGLEQTLVVSTALASAYARL 273
Query: 122 SCVVNARQVFDKILERDP----------------SEATL--------------VTVISAS 151
+ A++VFD+ ERD SEA L VT+++AS
Sbjct: 274 GHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNAS 333
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
++L GR +HG + + ++ + AL+DMY +CG + AR+LF+++ VSWN
Sbjct: 334 TGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRI-PCNAVSWN 392
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACS----RGGLFDEGRMFFES 266
MI G + G +A++LF++M+ E + P T++ +L A + EGR
Sbjct: 393 TMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSR 452
Query: 267 MVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ--MRVKPDPGVWGALLNSCKLHG 323
+V Y +P++ T +V + G +DEA + M + D W A+++S HG
Sbjct: 453 IVSCGYASEPAIG--TAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHG 510
Query: 324 HVKLA 328
H K A
Sbjct: 511 HGKRA 515
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 168/356 (47%), Gaps = 44/356 (12%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V++T L Y+ L+ A ++FDR +R++ WN ++ AYA +G A L+ R+L
Sbjct: 261 VVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHE 320
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ P T A CS+L GR IH + + D+ +G AL+DMY +C A
Sbjct: 321 GISPSKVTLVNASTGCSSLRF---GRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEA 377
Query: 128 RQVFDKI-------------------LER-------------DPSEATLVTVISASA--- 152
R +F +I ++R P AT + ++ A A
Sbjct: 378 RHLFKRIPCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNP 437
Query: 153 -DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ-LREKR--VV 208
+ A+ +GR+LH + + TA+V MYA CG + A F++ E R VV
Sbjct: 438 EEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVV 497
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNA+I+ + HGH +AL F +M V P+ IT V VL AC+ EG + + +
Sbjct: 498 SWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHL 557
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
R ++ ++ T + + G G L+ A ++ ++ V+ D ++ A++ + +G
Sbjct: 558 -RHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNG 612
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 182/405 (44%), Gaps = 48/405 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+ G L L+ LY C+ L + ++F R+ R+ W +I AY +G + AI +
Sbjct: 56 VSLGLEEELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGM 115
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
++R+ + G+ D TF LKAC+ L + +GR IH ++ + + + L+ +Y
Sbjct: 116 FHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGS 175
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C CV +A +F+K +ERD P+ TLV
Sbjct: 176 CGCVASAMLLFEK-MERDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIA 234
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
++ A I Q + +H E + V TAL YA+ G + A+ +F++ E+ V
Sbjct: 235 LTVCATI---RQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDV 291
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSWNAM+ YA HGH ++A LF +M E + P +T V + CS GRM
Sbjct: 292 VSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSS---LRFGRMIHGC 348
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+ + +D + ++D+ G +EA L R+ + W ++ G +K
Sbjct: 349 AL-EKGLDRDIVLGNALLDMYTRCGSPEEARHLF--KRIPCNAVSWNTMIAGSSQKGQMK 405
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWE---GVAKLRKL 368
A + L + ++LE L+ + A A+N E +A+ RKL
Sbjct: 406 RA-VELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKL 449
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 156/322 (48%), Gaps = 31/322 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP---QRNLFLWNVLIRAYAWNGPYEVAI 58
G+ P + T +V +Y++C + A F R + ++ WN +I + + +G + A+
Sbjct: 457 GYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRAL 516
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
+ R+ G+ P+ T L AC+ +A+ EG +H+ + + E+++FV AL MY
Sbjct: 517 GFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMY 576
Query: 119 AKCSCVVNARQVFDKI-LERDPSEATLVTVISASADIAALPQ----GRELHGFSWRHRFE 173
+C + +AR++F+K+ +ERD V+ +A IAA Q G L F WR + E
Sbjct: 577 GRCGSLESAREIFEKVAVERD--------VVIFNAMIAAYSQNGLAGEALKLF-WRMQQE 627
Query: 174 LNVKVKTALVDMYAKC---GLVKVARNLFEQLREKRVVS-----WNAMITGYAMHGHSTK 225
+ + + V + + C GL +F +R+ ++ + + G
Sbjct: 628 GSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLAD 687
Query: 226 ALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQH-YTCMV 284
A +L M +V+P + + +L AC + D GR+ SMVR+ +DP + Y +
Sbjct: 688 AEELIRCM--DVKPTVLVWKTLLGACRKYRDVDRGRL-ANSMVRE--LDPGDESAYVVLS 742
Query: 285 DLLGHSGRLDEACDLIMQMRVK 306
++L +G+ DEA ++ +M +
Sbjct: 743 NILAGAGKWDEAAEVRTEMESR 764
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 127/291 (43%), Gaps = 42/291 (14%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP 139
L+A + +GRRIH ++ E ++ G L+ +Y KC + + +VF ++ RD
Sbjct: 36 LRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRDE 93
Query: 140 SE---------------------------------ATLVTVISASADIAALPQGRELHGF 166
+ T + V+ A A + L QGR +H +
Sbjct: 94 ASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAW 153
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ + L+ +Y CG V A LFE++ E+ +VSWNA I A G A
Sbjct: 154 IVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGIA 212
Query: 227 LDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
L+LF++M+ E V+P IT V L+ C+ + + F +VR+ ++ ++ T +
Sbjct: 213 LELFQRMQLEGVRPARITLVIALTVCAT--IRQAQAIHF--IVRESGLEQTLVVSTALAS 268
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
G L +A + + + D W A+L + HGH+ A L +++
Sbjct: 269 AYARLGHLYQAKE-VFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARML 318
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/615 (35%), Positives = 322/615 (52%), Gaps = 104/615 (16%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQR------------------------- 36
G + L H+Y C + +A ++FDR+ ++
Sbjct: 146 GLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRIL 205
Query: 37 ----------NLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSAL 86
N+ WN ++ + +G ++ A+ ++ ++ +G PD T L +
Sbjct: 206 SEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDS 265
Query: 87 SAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDK------------- 133
+ GR+IH VI+ D V +A++DMY K V ++FD+
Sbjct: 266 ENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYI 325
Query: 134 -----------------ILERDPSEATLV---TVISASA----DIAALPQGREL------ 163
+ + E +V ++I+ A DI AL RE+
Sbjct: 326 TGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVK 385
Query: 164 --------------------HG-----FSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
HG F+ R +V V +AL+DMYAKCG +K+++ +
Sbjct: 386 PNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIV 445
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK-MKDEVQPDHITFVGVLSACSRGGLF 257
F + K +V WN+++ GY+MHG + + + +FE M+ ++PD I+F +LSAC + GL
Sbjct: 446 FNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLT 505
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
DEG +F M +Y I P ++HY+CMV+LLG +G+L EA DLI ++ +PD VWGALLN
Sbjct: 506 DEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLN 565
Query: 318 SCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKS 377
SC+L +V LAE+A +KL LEP + G YV++SNIYA W V +R M G+KK+
Sbjct: 566 SCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKN 625
Query: 378 IACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEK 437
CSWI+VKNK + L+ D SHP D+I K+ + M+++G+ P + DVE E+
Sbjct: 626 PGCSWIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQ 685
Query: 438 ANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNR 497
M+ HSE+LA+ FGL+NTPDGT L + KNL+IC DCH IKFIS REI +RD NR
Sbjct: 686 EQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNR 745
Query: 498 YHHFKDGICSCGDYW 512
+HHFKDGICSCGD+W
Sbjct: 746 FHHFKDGICSCGDFW 760
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 134/290 (46%), Gaps = 43/290 (14%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++ KL+ YS +C ++A + IP ++ ++ LI A + +I ++ R+ G
Sbjct: 52 ISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHG 111
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L+PD P K C+ LSA + G++IH + + D FV +L MY +C + +AR
Sbjct: 112 LIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDAR 171
Query: 129 QVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
+VFD++ E+D V++ SA L G++ + E V++ + + K
Sbjct: 172 KVFDRMSEKD--------VVTCSA---------LLCGYARKGCLEEVVRILSEM----EK 210
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGV 247
G+ E +VSWN +++G+ G+ +A+ +F+KM PD +T V
Sbjct: 211 SGI------------EPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSV 258
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTC----MVDLLGHSGRL 293
L + + GR + Y I + C M+D+ G SG +
Sbjct: 259 LPSVGDSENLNMGR-----QIHGYVIKQGLLKDKCVISAMLDMYGKSGHV 303
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 115/235 (48%), Gaps = 11/235 (4%)
Query: 99 VIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD--PSEATLVTVISASADIAA 156
++++ + V+ ++LI K + VF ++ P L + A+++A
Sbjct: 72 ILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSA 131
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
G+++H + +++ V+ +L MY +CG + AR +F+++ EK VV+ +A++ G
Sbjct: 132 FKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCG 191
Query: 217 YAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID- 274
YA G + + + +M K ++P+ +++ G+LS +R G E + F+ M +H+
Sbjct: 192 YARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKM---HHLGF 248
Query: 275 -PSVQHYTCMVDLLGHSGRLDEACDL---IMQMRVKPDPGVWGALLNSCKLHGHV 325
P + ++ +G S L+ + +++ + D V A+L+ GHV
Sbjct: 249 CPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHV 303
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/506 (38%), Positives = 313/506 (61%), Gaps = 18/506 (3%)
Query: 16 LYSAC---DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV-AIELYYRLLE--IGL 69
+Y+ C + ++ ++F+++P+ N+ W +I AY +G + AIEL+ +++ +
Sbjct: 1 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVNC 60
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
V ++ +A +E+ R+ D++ +E ++ A++D YAK A
Sbjct: 61 VGNSLISMYARSG-----RMEDARKAF-DIL---FEKNLVSYNAIVDGYAKNLKSEEAFL 111
Query: 130 VFDKILERDP--SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYA 187
+F++I + S T +++S +A I A+ +G ++HG + ++ N + AL+ MY+
Sbjct: 112 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 171
Query: 188 KCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVG 246
+CG ++ A +F ++ ++ V+SW +MITG+A HG +T+AL++F KM + +P+ IT+V
Sbjct: 172 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 231
Query: 247 VLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK 306
VLSACS G+ EG+ F SM +++ I P ++HY CMVDLLG SG L EA + I M +
Sbjct: 232 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 291
Query: 307 PDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLR 366
D VW LL +C++HG+ +L A E ++E EP D Y++LSN++A A W+ V K+R
Sbjct: 292 ADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIR 351
Query: 367 KLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTE 426
K M +R + K CSWIEV+N+ H F G+ SHP +IY +L L ++KE GY+P T+
Sbjct: 352 KSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTD 411
Query: 427 SVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKIT 486
V HD+E ++K + HSE++A+AFGLI+T + I KNL++C DCH AIK+IS T
Sbjct: 412 FVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMAT 471
Query: 487 EREITVRDVNRYHHFKDGICSCGDYW 512
REI VRD NR+HH K+G+CSC DYW
Sbjct: 472 GREIVVRDSNRFHHIKNGVCSCNDYW 497
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ + + L+ +YS C + A Q+F+ + RN+ W +I +A +G A+E++
Sbjct: 155 GYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMF 214
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRR 94
+++LE G P+ T+ L ACS + I EG++
Sbjct: 215 HKMLETGTKPNEITYVAVLSACSHVGMISEGQK 247
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/522 (39%), Positives = 309/522 (59%), Gaps = 24/522 (4%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
G + + L LY+ C + A +LFDR+ RN+ WN++I Y N E I+L++
Sbjct: 186 LGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFH 245
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWE---TDVFVGAALIDMYA 119
+ L PD T L A I+E R++ + IR K E T + VG
Sbjct: 246 EMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGE-IREKDEVCWTIMIVG-------- 296
Query: 120 KCSCVVNARQ-----VFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
C N ++ +F ++L + P T+ +V+S+ A +A+L G+ +HG ++
Sbjct: 297 ---CAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGV 353
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
++ V +ALVDMY KCG+ + A +F ++ + VVSWN+MI GYA++G +AL L+E
Sbjct: 354 NDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYEN 413
Query: 233 MKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
M +E ++PD +TFVGVLSAC GL +EG+ +F SM + ++P+ HY CMV+L G SG
Sbjct: 414 MLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSG 473
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSN 351
+D+A DLI M +P+ +W +L+ C + G +K E+A LIEL P +A Y++LSN
Sbjct: 474 HMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSN 533
Query: 352 IYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKW 411
+YA W+ VA +R LM + +KK A SWIE+ N+ H F++ D +HP+ I+ +L
Sbjct: 534 MYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNR 593
Query: 412 LEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDG-TRLLITKNLK 470
L +++EAG+ P T V HD DEK I HSE+LA+A+GLI P G T + I KN++
Sbjct: 594 LIRKLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIRIIKNIR 653
Query: 471 ICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
C DCHI +KF+S IT R + +RD NR+HHF +G CSC DYW
Sbjct: 654 TCADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 167/352 (47%), Gaps = 29/352 (8%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
++ LY+ + + +FD +P R+ +N +I +A NG A+ ++ R+ + GL P
Sbjct: 95 MLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPT 154
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+T L AC+ L + G++IH +I +VFV AL D+YA+C + AR++FD
Sbjct: 155 EYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFD 214
Query: 133 KILERDPSEATLVTVISASADIAALPQGRELHG-FSWRHRFEL-NVK----VKTALVDMY 186
+++ R+ V++ + I+ + R+ H ++ N+K ++++ Y
Sbjct: 215 RMVIRN--------VVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAY 266
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFV 245
+ G + AR +F ++REK V W MI G A +G AL LF +M + +PD T
Sbjct: 267 IQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTIS 326
Query: 246 GVLSACSR-----GGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
V+S+C++ G G+ F + D + + +VD+ G +A +
Sbjct: 327 SVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVS------SALVDMYCKCGVTRDAWTIF 380
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHDAGNYVILS 350
M+ + + W +++ L+G A E ++E L+P +LS
Sbjct: 381 STMQTR-NVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLS 431
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 108/226 (47%), Gaps = 40/226 (17%)
Query: 83 CSALSAIEEGRRIHEDVIRNKWE-TDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSE 141
C S +++ +R+ + + ++ D F+ L+++YAK + +AR++FD++ +RD
Sbjct: 32 CFRASDVDQAKRLKSHMHLHLFKPNDTFIHNRLLNLYAKSGEISHARKLFDEMTQRD--- 88
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
FSW A++ +YAK GLV+ R +F+
Sbjct: 89 -----------------------NFSW-----------NAMLSLYAKSGLVEDLRVIFDN 114
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEG 260
+ + VS+N +I+G+A +G AL +F +M+ E ++P T V VL+AC++ G
Sbjct: 115 MPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRG 174
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK 306
+ ++ ++ +V + DL G +D+A L +M ++
Sbjct: 175 KQIHGRIII-CNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIR 219
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG ++++ LV +Y C +A +F + RN+ WN +I YA NG A+ L
Sbjct: 351 MGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSL 410
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
Y +LE L PD+ TF L AC +EEG+
Sbjct: 411 YENMLEENLKPDSVTFVGVLSACVHAGLVEEGK 443
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/539 (36%), Positives = 309/539 (57%), Gaps = 35/539 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+ L+++Y+ C L A ++FD++P+R+ W LI Y+ + A+ L+ ++L
Sbjct: 87 VMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRF 146
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G P+ FT +KA +A G ++H ++ ++++V VG+AL+D+Y + + +A
Sbjct: 147 GFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDA 206
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
+ VFD + R+ PS + ++ A +
Sbjct: 207 QLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSST 266
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L QG+ +H + + +L L+DMYAK G + AR +F++L ++ VVSWN+++
Sbjct: 267 GFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLL 326
Query: 215 TGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
T YA HG +A+ FE+M+ ++P+ I+F+ VL+ACS GL DEG ++E M +D I
Sbjct: 327 TAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GI 385
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
HY +VDLLG +G L+ A I +M ++P +W ALLN+C++H + +L A E
Sbjct: 386 VLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAE 445
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
+ EL+P D G +VIL NIYA W A++RK M + G+KK ACSW+E++N H F+
Sbjct: 446 HVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFV 505
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
+ D HP +EI K + + ++KE GYVP T V V+ E+ + HSE++A+AF
Sbjct: 506 ANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFA 565
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+NTP G+ + I KN+++C DCH AIK SK REI VRD NR+HHFKDG CSC DYW
Sbjct: 566 LLNTPPGSTIHIKKNIRVCGDCHSAIKLASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 146/294 (49%), Gaps = 37/294 (12%)
Query: 65 LEIGLVP-DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
LE +P D + LK C+ + +GR +H +I++ + D+ + L++MYAKC
Sbjct: 42 LEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGS 101
Query: 124 VVNARQVFDKILERD---------------------------------PSEATLVTVISA 150
+ AR+VFDK+ ERD P+E TL +VI A
Sbjct: 102 LEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKA 161
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
+A G +LHGF + F+ NV V +AL+D+Y + GL+ A+ +F+ L + VSW
Sbjct: 162 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 221
Query: 211 NAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
NA+I G+A + KAL+LF+ M ++ +P H ++ + ACS G ++G+ M++
Sbjct: 222 NALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 281
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+ T ++D+ SG + +A + ++ K D W +LL + HG
Sbjct: 282 SGEKLVAFAGNT-LLDMYAKSGSIHDARKIFDRL-AKRDVVSWNSLLTAYAQHG 333
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 10/194 (5%)
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
T++ L QGR +HG + F ++ + L++MYAKCG ++ AR +F+++ E+
Sbjct: 56 TLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPER 115
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
V+W +I+GY+ H AL LF +M + P+ T V+ A + G
Sbjct: 116 DFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLH 175
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
V+ D +V + ++DL G +D+A + + + D W AL+ GH
Sbjct: 176 GFCVK-CGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS-WNALIA-----GH 228
Query: 325 VKLAELALEKLIEL 338
+ EK +EL
Sbjct: 229 AR--RCGTEKALEL 240
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/541 (38%), Positives = 317/541 (58%), Gaps = 48/541 (8%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T +V Y+ L A + FD +P+R++ WN ++ YA NG E A+ L+ ++ G+
Sbjct: 198 TAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIE 257
Query: 71 PDNFTFPFALKACSALS----AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
PD T+ + ACS+ A R +H+ I + + FV AL+DMYAK + +
Sbjct: 258 PDETTWVTVISACSSRGDPCLAASLVRTLHQKRI----QLNCFVRTALLDMYAKFGDLDS 313
Query: 127 ARQVFDKILERD----------------------------------PSEATLVTVISASA 152
AR++F+ + R+ P E T+V+VISA
Sbjct: 314 ARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACG 373
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+ AL G + F ++ +L++ A++ MY++CG ++ A+ +F+++ + VVS+N
Sbjct: 374 HLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNT 433
Query: 213 MITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
+I+G+A HGH +A++L MK+ ++PD +TF+GVL+ACS GL +EGR FES+
Sbjct: 434 LISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK--- 490
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
DP++ HY CMVDLLG G L++A + +M ++P GV+G+LLN+ ++H V+L ELA
Sbjct: 491 --DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELA 548
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHA 391
KL ELEP ++GN+++LSNIYA A W+ V ++R+ M G+KK+ SW+E K H
Sbjct: 549 ANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHK 608
Query: 392 FLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIA 451
F+ D SH D+IY L L +M+EAGY+ V DVE +EK ++ HSE+LAI
Sbjct: 609 FIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAIC 668
Query: 452 FGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
+ L+ + G + + KNL++C DCH AIK ISK+ R I VRD NR+H F DG+CSC DY
Sbjct: 669 YALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDY 728
Query: 512 W 512
W
Sbjct: 729 W 729
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 164/339 (48%), Gaps = 26/339 (7%)
Query: 24 HNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKAC 83
H H LF+ N+F++ ++R Y+ + + +Y ++ G+ PD F +P +K
Sbjct: 51 HYTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIK-- 108
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEAT 143
SA G H V++ +D FV A+IDMYA+ + +AR+VFD+I + + A
Sbjct: 109 ---SAGTGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVAD 165
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
++S + Q + L E NV TA+V YAK ++ AR F+ +
Sbjct: 166 WNAMVSGYWKWESEGQAQWLFDV----MPERNVITWTAMVTGYAKVKDLEAARRYFDCMP 221
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRM 262
E+ VVSWNAM++GYA +G + +AL LF++M + ++PD T+V V+SACS G
Sbjct: 222 ERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRG----DPC 277
Query: 263 FFESMVRDYH---IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPG----VWGAL 315
S+VR H I + T ++D+ G LD A L M PG W ++
Sbjct: 278 LAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTM-----PGRNVVTWNSM 332
Query: 316 LNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYA 354
+ +G +A +++I + ++S I A
Sbjct: 333 IAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISA 371
>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Cucumis sativus]
Length = 712
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/535 (37%), Positives = 310/535 (57%), Gaps = 35/535 (6%)
Query: 12 KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
+VH + + + +A +LF+++P RN+ W +I NG A+ +++++L
Sbjct: 179 SMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKMLA-SFKA 237
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
+ T AL AC+ + G +IH +++ + + ++ A+LI YA C + NA +F
Sbjct: 238 TSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDNASSIF 297
Query: 132 DKILERD---------------------------------PSEATLVTVISASADIAALP 158
+ + R+ P++++L + +++ + A+
Sbjct: 298 NDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVD 357
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
+GRE+H + + E ++ V +LV MY KCG + +F ++ K VVSWN++I G A
Sbjct: 358 RGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCA 417
Query: 219 MHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
HG AL LF +M + V PD IT G+LSAC G+ +GR FF+ +++ I+ +
Sbjct: 418 QHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTN 477
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+HY+ MVDLLG G+L+EA LI M K + VW ALL+S H +V +AE A + +++
Sbjct: 478 EHYSSMVDLLGRYGQLEEAEALIHIMPGKANYMVWLALLSSSINHSNVHVAERAAKCVLD 537
Query: 338 LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDA 397
L+P+ + Y +LSN+YA W V+K+RK M D GI K SWI +K H F+SGD
Sbjct: 538 LQPNCSAAYTLLSNLYASTGKWTEVSKIRKKMKDEGILKQPGSSWITIKGIKHNFISGDQ 597
Query: 398 SHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINT 457
SHP +IY KL+WL G++KE GYVP + FHDVE ++K M+ HSERLAI FGLI+T
Sbjct: 598 SHPLSRKIYQKLEWLGGKLKELGYVPDPKFSFHDVETEQKEEMLSYHSERLAIGFGLIST 657
Query: 458 PDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+G+ +++ KNL+IC DCH A+K SK+ REI VRD +R+HHF +G CSCGDYW
Sbjct: 658 VEGSTIIVMKNLRICGDCHNAVKLTSKVVGREIVVRDPSRFHHFHNGTCSCGDYW 712
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 131/329 (39%), Gaps = 82/329 (24%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A LF+++ + L+ ++I YA G E A++L+Y + V D ++ LK C
Sbjct: 69 ARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEMP----VKDLISWNSMLKGC-- 122
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLV 145
KC + A +FDK+ ER+
Sbjct: 123 ---------------------------------LKCGDLTMACNMFDKMSERN------- 142
Query: 146 TVISASADIAALPQ-GR-ELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
V+S + I L + GR E+ +R +V ++V + G V+ A LFE++
Sbjct: 143 -VVSWTTIINGLLEFGRVEVAECLFRVMPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMP 201
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSR---------- 253
+ V+SW ++I G +G S +AL +F KM + T L+AC+
Sbjct: 202 NRNVISWTSVIGGLDHNGRSFEALVVFHKMLASFKATSSTLACALTACANICTPFIGVQI 261
Query: 254 -GGLFDEGRMFFE----SMVRDY---------------HIDPSVQHYTCMVDLLGHSGRL 293
G + G F E S++ Y ++ +V +T ++ G + R
Sbjct: 262 HGLIVKTGYCFNEYISASLISFYANCKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRH 321
Query: 294 DEACDL---IMQMRVKPDPGVWGALLNSC 319
+A + +M+M V P+ + LNSC
Sbjct: 322 TDALQVFKGMMRMSVLPNQSSLTSALNSC 350
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 13/163 (7%)
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD 235
V + T ++ YA G ++ A LF ++ K ++SWN+M+ G G T A ++F+KM +
Sbjct: 81 VNLYTMMIGGYADEGRLEDALKLFYEMPVKDLISWNSMLKGCLKCGDLTMACNMFDKMSE 140
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
T + GL + GR+ + V + MV +GR+++
Sbjct: 141 RNVVSWTTII--------NGLLEFGRVEVAECLFRVMPTKDVTAWNSMVHGFFSNGRVED 192
Query: 296 ACDLIMQMRVKPDPGV--WGALLNSCKLHGHVKLAELALEKLI 336
A +L +M P+ V W +++ +G A + K++
Sbjct: 193 AIELFEKM---PNRNVISWTSVIGGLDHNGRSFEALVVFHKML 232
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++ LV +Y+ C +++ +F R+ ++N+ WN +I A +G A+ L+ +++
Sbjct: 377 VSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTR 436
Query: 69 LVPDNFTFPFALKACSALSAIEEGR 93
+ PD T L AC + +GR
Sbjct: 437 VDPDEITLAGLLSACGHSGMLTKGR 461
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDH 241
L+ + + G + AR+LF ++ V + MI GYA G AL LF +M + D
Sbjct: 56 LLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEMPVK---DL 112
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
I++ +L C + G F+ M + +V +T +++ L GR++ A L
Sbjct: 113 ISWNSMLKGCLKCGDLTMACNMFDKMS-----ERNVVSWTTIINGLLEFGRVEVAECLFR 167
Query: 302 QMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
M K D W ++++ +G V+ A EK+
Sbjct: 168 VMPTK-DVTAWNSMVHGFFSNGRVEDAIELFEKM 200
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/539 (37%), Positives = 308/539 (57%), Gaps = 49/539 (9%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
+ + LF ++P ++ WN +I NG VA+EL Y+++ G + TF AL
Sbjct: 470 MQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVL 529
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF----------- 131
S+LS + G++IH V++ D FV +LIDMY KC + A +F
Sbjct: 530 ASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMN 589
Query: 132 ------DKILER-------------------------------DPSEATLVTVISASADI 154
D ++E + + TL +V+SA A
Sbjct: 590 SEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASA 649
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L GR++HG+ + L+V + ++++DMY KCG + A +F Q +++ VV W +MI
Sbjct: 650 GVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMI 709
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+G A+HG +A+ LFE M +E + P+ ++FVGVL+ACS GL +EG +F M Y I
Sbjct: 710 SGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGI 769
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P +H+TCMVDL G +GRL+E + I + VW + L+SC++H ++++ +
Sbjct: 770 RPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCK 829
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
KL+ELEP DAG Y++ S+I A WE AK+R LM RG+KK+ + SWI++KN+ H+F+
Sbjct: 830 KLLELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFV 889
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD SHP +IY+ L L GR+KE GY V DVE +++ ++ HSE+LAIA+G
Sbjct: 890 MGDRSHPQDTKIYSYLDELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYG 949
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+I+T GT + + KNL++C DCH IK+ S++ REI +RD++R+HHFK G CSC DYW
Sbjct: 950 IISTAPGTPIRVMKNLRVCIDCHNFIKYASELLGREIIIRDIHRFHHFKHGHCSCADYW 1008
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 38/222 (17%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L++LY+ L AH++F+ IPQ ++F W VLI +A G + L+ ++ + G+ P+
Sbjct: 327 LLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPN 386
Query: 73 NFTFPFALKACSA-LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
FT LK+CS+ ++ G+ IH ++RN + D + +++D Y KC C A ++F
Sbjct: 387 QFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLF 446
Query: 132 DKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGL 191
+ E+D SW ++ Y + G
Sbjct: 447 GLMAEKDT--------------------------VSW-----------NIMMSSYLQIGD 469
Query: 192 VKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
++ + +LF QL K SWN MI G +G AL+L KM
Sbjct: 470 MQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKM 511
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G G L + ++ +Y C L++A +F++ RN+ LW +I A +G A+ L
Sbjct: 665 IGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRL 724
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ ++ G+ P+ +F L ACS +EEG
Sbjct: 725 FELMINEGITPNEVSFVGVLTACSHAGLLEEG 756
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPD 240
L+++YAK ++ A +FE++ + V SW +I+G+A G S L LF KM+D+ V P+
Sbjct: 327 LLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPN 386
Query: 241 HITFVGVLSACS 252
T VL +CS
Sbjct: 387 QFTLSIVLKSCS 398
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/524 (39%), Positives = 297/524 (56%), Gaps = 36/524 (6%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+A +LFD IP+RNL WN I +G AIE + I P++ TF L ACS
Sbjct: 111 DARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 170
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER------- 137
+ G ++H V+R+ ++TDV V LID Y KC + ++ +F ++ +
Sbjct: 171 DWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCS 230
Query: 138 --------------------------DPSEATLVTVISASADIAALPQGRELHGFSWRHR 171
+ S+ + +V+SA A +A L GR +H + +
Sbjct: 231 LVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKAC 290
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
E + V +ALVDMY KCG ++ + F+++ EK +V+ N++I GYA G AL LFE
Sbjct: 291 VERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFE 350
Query: 232 KMKDE---VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
+M P+++TFV +LSACSR G + G F+SM Y I+P +HY+C+VD+LG
Sbjct: 351 EMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLG 410
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
+G ++ A + I +M ++P VWGAL N+C++HG +L LA E L +L+P D+GN+V+
Sbjct: 411 RAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVL 470
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAK 408
LSN +A A W +R+ + GIKK SWI VKN+ HAF + D SH EI
Sbjct: 471 LSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTT 530
Query: 409 LKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKN 468
L L M+ AGY P + +D+E +EKA + HSE+LA+AFGL++ P + ITKN
Sbjct: 531 LAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKN 590
Query: 469 LKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+IC DCH KF+S +REI VRD NR+H FKDGICSC DYW
Sbjct: 591 LRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 634
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 167/376 (44%), Gaps = 42/376 (11%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFT 75
+YS D +A + P RN+ W LI A NG + A+ ++ + G+VP++FT
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL 135
FP A KA ++L G++IH ++ DVFVG + DMY K +AR++FD+I
Sbjct: 61 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120
Query: 136 ERD---------------------------------PSEATLVTVISASADIAALPQGRE 162
ER+ P+ T ++A +D L G +
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
LHG R F+ +V V L+D Y KC ++ + +F ++ K VSW +++ Y +
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 240
Query: 223 STKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYT 281
KA L+ KD V+ VLSAC+ + GR V+ ++ ++ +
Sbjct: 241 DEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKAC-VERTIFVGS 299
Query: 282 CMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPH 341
+VD+ G G ++++ +M K + +L+ G V ++AL E+ P
Sbjct: 300 ALVDMYGKCGCIEDSEQAFDEMPEK-NLVTRNSLIGGYAHQGQV---DMALALFEEMAPR 355
Query: 342 DAG---NYVILSNIYA 354
G NY+ ++ +
Sbjct: 356 GCGPTPNYMTFVSLLS 371
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE-- 66
+ + LV +Y C C+ ++ Q FD +P++NL N LI YA G ++A+ L+ +
Sbjct: 297 VGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRG 356
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYAKCSCV 124
G P+ TF L ACS A+E G +I D +R+ + E + ++DM + V
Sbjct: 357 CGPTPNYMTFVSLLSACSRAGAVENGMKIF-DSMRSTYGIEPGAEHYSCIVDMLGRAGMV 415
Query: 125 VNARQVFDKI 134
A + K+
Sbjct: 416 ERAYEFIKKM 425
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/524 (39%), Positives = 297/524 (56%), Gaps = 36/524 (6%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+A +LFD IP+RNL WN I +G AIE + I P++ TF L ACS
Sbjct: 161 DARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 220
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER------- 137
+ G ++H V+R+ ++TDV V LID Y KC + ++ +F ++ +
Sbjct: 221 DWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCS 280
Query: 138 --------------------------DPSEATLVTVISASADIAALPQGRELHGFSWRHR 171
+ S+ + +V+SA A +A L GR +H + +
Sbjct: 281 LVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKAC 340
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
E + V +ALVDMY KCG ++ + F+++ EK +V+ N++I GYA G AL LFE
Sbjct: 341 VERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFE 400
Query: 232 KMKDE---VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
+M P+++TFV +LSACSR G + G F+SM Y I+P +HY+C+VD+LG
Sbjct: 401 EMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLG 460
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
+G ++ A + I +M ++P VWGAL N+C++HG +L LA E L +L+P D+GN+V+
Sbjct: 461 RAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVL 520
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAK 408
LSN +A A W +R+ + GIKK SWI VKN+ HAF + D SH EI
Sbjct: 521 LSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTT 580
Query: 409 LKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKN 468
L L M+ AGY P + +D+E +EKA + HSE+LA+AFGL++ P + ITKN
Sbjct: 581 LAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKN 640
Query: 469 LKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+IC DCH KF+S +REI VRD NR+H FKDGICSC DYW
Sbjct: 641 LRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 173/385 (44%), Gaps = 42/385 (10%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P LA L+++YS D +A + P RN+ W LI A NG + A+ ++ +
Sbjct: 42 PFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRR 101
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
G+VP++FTFP A KA ++L G++IH ++ DVFVG + DMY K +
Sbjct: 102 EGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 161
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISASAD 153
AR++FD+I ER+ P+ T ++A +D
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 221
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
L G +LHG R F+ +V V L+D Y KC ++ + +F ++ K VSW ++
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSL 281
Query: 214 ITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
+ Y + KA L+ KD V+ VLSAC+ + GR V+
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKAC- 340
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
++ ++ + +VD+ G G ++++ +M K + +L+ G V ++AL
Sbjct: 341 VERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK-NLVTRNSLIGGYAHQGQV---DMAL 396
Query: 333 EKLIELEPHDAG---NYVILSNIYA 354
E+ P G NY+ ++ +
Sbjct: 397 ALFEEMAPRGCGPTPNYMTFVSLLS 421
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE-- 66
+ + LV +Y C C+ ++ Q FD +P++NL N LI YA G ++A+ L+ +
Sbjct: 347 VGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRG 406
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYAKCSCV 124
G P+ TF L ACS A+E G +I D +R+ + E + ++DM + V
Sbjct: 407 CGPTPNYMTFVSLLSACSRAGAVENGMKIF-DSMRSTYGIEPGAEHYSCIVDMLGRAGMV 465
Query: 125 VNARQVFDKI 134
A + K+
Sbjct: 466 ERAYEFIKKM 475
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/414 (45%), Positives = 271/414 (65%), Gaps = 10/414 (2%)
Query: 109 FVGAALIDMYAKCSCVVNARQVFDKILERD---------PSEATLVTVISASADIAALPQ 159
F+ +I +A +++ +++ K++E+ P+ ++++V+ A ++ AL +
Sbjct: 543 FLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRK 602
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G H + + FE ++ V TA++DMY+KCG + +AR LF++ K +V W+AMI Y +
Sbjct: 603 GEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGI 662
Query: 220 HGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
HGH KA+DLF++M K V+P H+TF VLSACS GL +EG+M+F+ M ++ I +
Sbjct: 663 HGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLS 722
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
+Y CMVDLLG +G+L EA DLI M V+PD +WG+LL +C++H ++ LAE + L L
Sbjct: 723 NYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHL 782
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDAS 398
+P AG +V+LSNIYA + W V K+RK+M RG K S +E N+ H F GD S
Sbjct: 783 DPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRS 842
Query: 399 HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTP 458
HP +++YAKL+ L MK GYVP T+ V HD+E + K + HSERLAIAFGLINT
Sbjct: 843 HPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTS 902
Query: 459 DGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
GT L ITKNL+IC DCH AIK ISKI R I VRD++R+H F+DG+CSCGDYW
Sbjct: 903 PGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 956
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 148/260 (56%), Gaps = 12/260 (4%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-EI 67
ATKL LY+ C L A ++FD P N+ LWN +R+Y +E + L++ ++
Sbjct: 38 FATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTA 97
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN-KWETDVFVGAALIDMYAKCSCVVN 126
G PDNFT P ALKAC+ L +E G+ IH +N + +D+FVG+AL+++Y+KC +
Sbjct: 98 GEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGE 157
Query: 127 ARQVFDKILERDPSEAT-LVTVISASADIAALPQGRELHGFSWRHR---FELNVKVKTAL 182
A +VF++ D T +VT + D P+ L FS F+ ++ + +L
Sbjct: 158 ALKVFEEFQRPDTVLWTSMVTGYQQNND----PE-EALALFSQMVMMDCFDGDLPLVNSL 212
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDH 241
+++YAK G K+A NLF ++ EK V+SW+ MI YA + + +AL+LF +M + +P+
Sbjct: 213 LNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNS 272
Query: 242 ITFVGVLSACSRGGLFDEGR 261
+T V L AC+ +EG+
Sbjct: 273 VTVVSALQACAVSRNLEEGK 292
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 128/232 (55%), Gaps = 6/232 (2%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L++LY+ C A LF ++P++++ W+ +I YA N A+ L++ ++E
Sbjct: 208 LVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKR 267
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P++ T AL+AC+ +EEG++IH+ + W+ DV AL+ YA+ +
Sbjct: 268 FEPNSVTVVSALQACAVSRNLEEGKKIHKIAV---WK-DVVSWVALLSGYAQNGMAYKSM 323
Query: 129 QVFDKILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
VF +L P +V +++AS+++ Q LHG+ R F NV V +L+++Y
Sbjct: 324 GVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELY 383
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ 238
+KCG + A LF+ + + VV W++MI Y +HG +AL++F++M +Q
Sbjct: 384 SKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQ 435
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 139/294 (47%), Gaps = 35/294 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + + TK +Y + + + A +F+ IP FLWNV+IR +A +G + ++ELY
Sbjct: 506 GLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELY 565
Query: 62 YRLLEIGLVPDN-------FTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAAL 114
+++E GL PDN + L AC L A+ +G H VI+ +E D+ V A+
Sbjct: 566 SKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAI 625
Query: 115 IDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL 174
+DMY+KC + AR +FD+ +D ++ SA IA+ G HG F+
Sbjct: 626 MDMYSKCGSLDLARCLFDETAGKD--------LVCWSAMIASY--GIHGHGRKAIDLFDQ 675
Query: 175 NVKVK--------TALVDMYAKCGLVKVARNLFEQLREKRVVS-----WNAMITGYAMHG 221
VK T ++ + GL++ + F+ + E+ V++ + M+ G
Sbjct: 676 MVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAG 735
Query: 222 HSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
++A+DL E M V+PD + +L AC D + + +H+DP
Sbjct: 736 QLSEAVDLIENMP--VEPDASIWGSLLGACRIHNNLDLAEKIADHL---FHLDP 784
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 148/334 (44%), Gaps = 45/334 (13%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ + LV LYS C + A ++F+ + + LW ++ Y N E A+ L+ +++ +
Sbjct: 141 VGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMD 200
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ +L A + E +I ++ E DV + +I YA A
Sbjct: 201 CFDGDLPLVNSLLNLYAKTGCE---KIAANLFSKMPEKDVISWSTMIACYANNEAANEAL 257
Query: 129 QVFDKILER--DPSEATLVTVISASADIAALPQGRELHGFS-WRHRFELNVKVKTALVDM 185
+F +++E+ +P+ T+V+ + A A L +G+++H + W
Sbjct: 258 NLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVW----------------- 300
Query: 186 YAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITF 244
K VVSW A+++GYA +G + K++ +F M D +QPD +
Sbjct: 301 -------------------KDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAV 341
Query: 245 VGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
V +L+A S G+F + +VR + +V +++L G L +A L M
Sbjct: 342 VKILAASSELGIFQQALCLHGYVVRS-GFNSNVFVGASLIELYSKCGSLGDAVKLFKGMI 400
Query: 305 VKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
V+ D +W +++ + +HG A +++I++
Sbjct: 401 VR-DVVIWSSMIAAYGIHGRGGEALEIFDQMIQV 433
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 148/354 (41%), Gaps = 61/354 (17%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + L+ LYS C L +A +LF + R++ +W+ +I AY +G A+E++
Sbjct: 368 GFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIF 427
Query: 62 YRLL----------EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG 111
+++ +I + P P A+ +C+ + I W+ F
Sbjct: 428 DQMIQVMQGITSCYQISMQP-QVQPPLAITSCTLATHI-------------PWKVKAFYM 473
Query: 112 AALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHR 171
A F +I P +A AD++ + + F++ +
Sbjct: 474 RAHFRWLGH----------FWEIFPTYPFQA---------ADMS------KSNIFAYGLQ 508
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
++ + K A+ MY + A +FE + WN MI G+A G +L+L+
Sbjct: 509 YDSRILTKFAI--MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYS 566
Query: 232 KMKDE--------VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
KM ++ V P+ ++ + VL AC G +G +F S V + + T +
Sbjct: 567 KMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGE-WFHSYVIQTGFEFDILVATAI 625
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+D+ G LD A L + K D W A++ S +HGH + A +++++
Sbjct: 626 MDMYSKCGSLDLARCLFDETAGK-DLVCWSAMIASYGIHGHGRKAIDLFDQMVK 678
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 92/208 (44%), Gaps = 8/208 (3%)
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM--KDEV 237
T L +YAKC ++ AR +F++ V WN+ + Y + L LF M
Sbjct: 40 TKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGE 99
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
PD+ T L AC+ + + G++ ++ I + + +V+L G++ EA
Sbjct: 100 APDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEAL 159
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI--LSNIYAR 355
+ + + +PD +W +++ + + + A +++ ++ D ++ L N+YA+
Sbjct: 160 KVFEEFQ-RPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAK 218
Query: 356 AANWEGVAKLRKLMIDRGI---KKSIAC 380
+ A L M ++ + IAC
Sbjct: 219 TGCEKIAANLFSKMPEKDVISWSTMIAC 246
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/570 (38%), Positives = 310/570 (54%), Gaps = 74/570 (12%)
Query: 17 YSACDCLHN------AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG-- 68
+ A LHN A++L + LF N +IRAY+ + + Y +L
Sbjct: 47 FVATIALHNTTNLDYANKLLNHNNNPTLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNN 106
Query: 69 -LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN- 126
L PDN+TF F ++ C+ L A G +H VI++ +E D V L+ MYA+ C+ +
Sbjct: 107 NLSPDNYTFTFLVRTCAQLQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSC 166
Query: 127 ------------------------------ARQVFDKILERDP----------------- 139
AR++FD++ ERD
Sbjct: 167 HNVFDGAVEPDLVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSR 226
Query: 140 ----------------SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALV 183
+E ++V V+SA + L GR +H + R++ + V + TALV
Sbjct: 227 EALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALV 286
Query: 184 DMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHI 242
DMYAKCG V A +F ++E+ V +W++ I G AM+G ++LDLF MK E VQP+ I
Sbjct: 287 DMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGI 346
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
TF+ VL CS GL +EGR F+SM Y I P ++HY MVD+ G +GRL EA + I
Sbjct: 347 TFISVLKGCSVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINS 406
Query: 303 MRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGV 362
M ++P G W ALL++C+++ + +L E+A K++ELE + G YV+LSNIYA NWE V
Sbjct: 407 MPMRPHVGAWSALLHACRMYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESV 466
Query: 363 AKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYV 422
+ LR+ M +G+KK CS IEV + H F+ GD SHP DEI KL+ + ++ +GYV
Sbjct: 467 SSLRQTMKAKGVKKLPGCSVIEVDGEVHEFIVGDKSHPRYDEIEMKLEEISKCLRLSGYV 526
Query: 423 PGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFI 482
T V D+E +EK + + HSE++AIAFGLI+ + + NL+IC DCH K I
Sbjct: 527 ANTNPVLFDIEEEEKEDALSKHSEKVAIAFGLISLKGVVPIRVVMNLRICWDCHNVAKMI 586
Query: 483 SKITEREITVRDVNRYHHFKDGICSCGDYW 512
SKI REI VRD NR+HHFKDG CSC DYW
Sbjct: 587 SKIFNREIIVRDRNRFHHFKDGECSCKDYW 616
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 116/249 (46%), Gaps = 37/249 (14%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V T +++ + C + A ++FD +P+R+ WN +I YA G A+++++ +
Sbjct: 179 VTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQME 238
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ + + L AC+ L ++ GR +H V R K V +G AL+DMYAKC V A
Sbjct: 239 GVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRA 298
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
QVF + ER+ P+ T ++V+ + +
Sbjct: 299 MQVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVV 358
Query: 155 AALPQGRELHGFSWRHRFELNVKVK--TALVDMYAKCGLVKVARNLFEQLREK-RVVSWN 211
+ +GR+ H S R+ + + +++ +VDMY + G +K A N + + V +W+
Sbjct: 359 GLVEEGRK-HFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWS 417
Query: 212 AMITGYAMH 220
A++ M+
Sbjct: 418 ALLHACRMY 426
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/547 (39%), Positives = 305/547 (55%), Gaps = 44/547 (8%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL L+ +Y+ C A LF+ IP N WN +I + G + A+EL+ R+
Sbjct: 359 VLGNALLDMYTRCGSPEEARHLFEGIPG-NAVSWNTMIAGSSQKGQMKRALELFQRMQLE 417
Query: 68 GLVPDNFTFPFALKACSA----LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
G+ P T+ L+A ++ A+ EGR++H ++ + ++ +G A++ MYA C
Sbjct: 418 GMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGA 477
Query: 124 VVNARQVFDKILERD------------------------------------PSEATLVTV 147
+ A F + D P++ T V V
Sbjct: 478 IDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAV 537
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-EKR 206
+ A A AAL +G +H E NV V TAL MY +CG ++ AR +FE++ E+
Sbjct: 538 LDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERD 597
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
VV +NAMI Y+ +G + +AL LF +M+ E +PD +FV VLSACS GGL DEG F
Sbjct: 598 VVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFR 657
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
SM + Y I PS HY C VD+LG +G L +A +LI M VKP VW LL +C+ + V
Sbjct: 658 SMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDV 717
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
LA + EL+P D YV+LSNI A A W+ A++R M RG++K SWIE+
Sbjct: 718 DRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEI 777
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
K++ H F++GD SHP +EIY +L+ L ++E GYVP T V V+ EK ++C HS
Sbjct: 778 KSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHS 837
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
ERLAIA G++++ T + + KNL++C+DCH A KFISKI +EI VRD +R+HHF DG
Sbjct: 838 ERLAIALGVMSSSTDT-VRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGS 896
Query: 506 CSCGDYW 512
CSCGDYW
Sbjct: 897 CSCGDYW 903
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 190/402 (47%), Gaps = 49/402 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G VLA L+H+Y +C C+ +A LF+R+ +R+L WN I A A +G ++A+EL+
Sbjct: 158 GLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALELF 216
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+ G+ P T L C+ I + R IH V + E + V AL YA+
Sbjct: 217 QRMQLEGVRPARITLVITLSVCAK---IRQARAIHSIVRESGLEQTLVVSTALASAYARL 273
Query: 122 SCVVNARQVFDKILERDP----------------SEATL--------------VTVISAS 151
+ A++VFD+ ERD SEA L VT+++AS
Sbjct: 274 GHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNAS 333
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
++L GR +H + + ++ + AL+DMY +CG + AR+LFE + VSWN
Sbjct: 334 TGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGI-PGNAVSWN 392
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACS----RGGLFDEGRMFFES 266
MI G + G +AL+LF++M+ E + P T++ +L A + EGR
Sbjct: 393 TMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSR 452
Query: 267 MVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ--MRVKPDPGVWGALLNSCKLHG 323
+V Y +P++ T +V + G +DEA + M + D W A+++S HG
Sbjct: 453 IVSCGYASEPAIG--TAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHG 510
Query: 324 HVKLAELALEKLIELE---PHDAGNYVILSNIYARAANWEGV 362
H K A L + ++L P+ +L AA EGV
Sbjct: 511 HGKRA-LGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGV 551
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 182/406 (44%), Gaps = 50/406 (12%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+ G L L+ LY C+ L + ++F R+ R+ W +I AY +G + AI +
Sbjct: 56 VSLGLEEELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWM 115
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
++R+ + G+ D TF LKAC+ L + +GR IH ++ + E + L+ +Y
Sbjct: 116 FHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGS 175
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C CV +A +F++ +ERD P+ TLV
Sbjct: 176 CGCVASAMLLFER-MERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVIT 234
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+S A I Q R +H E + V TAL YA+ G + A+ +F++ E+ V
Sbjct: 235 LSVCAKI---RQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDV 291
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VSWNAM+ YA HGH ++A LF +M E + P +T V + CS GRM
Sbjct: 292 VSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSS---LRFGRMIHAC 348
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV-WGALLNSCKLHGHV 325
+ + +D + ++D+ G +EA L + P V W ++ G +
Sbjct: 349 AL-EKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGI---PGNAVSWNTMIAGSSQKGQM 404
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWE---GVAKLRKL 368
K A L L + ++LE L+ + A A+N E +A+ RKL
Sbjct: 405 KRA-LELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKL 449
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 156/322 (48%), Gaps = 31/322 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP---QRNLFLWNVLIRAYAWNGPYEVAI 58
G+ P + T +V +Y++C + A F R + ++ WN +I + + +G + A+
Sbjct: 457 GYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRAL 516
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
+ R+ G+ P+ T L AC+ +A+ EG +H+ + + E++VFV AL MY
Sbjct: 517 GFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMY 576
Query: 119 AKCSCVVNARQVFDKI-LERDPSEATLVTVISASADIAALPQ----GRELHGFSWRHRFE 173
+C + +AR++F+K+ +ERD V+ +A IAA Q G L F WR + E
Sbjct: 577 GRCGSLESAREIFEKVAVERD--------VVIFNAMIAAYSQNGLAGEALKLF-WRMQQE 627
Query: 174 LNVKVKTALVDMYAKC---GLVKVARNLFEQLREKRVVS-----WNAMITGYAMHGHSTK 225
+ + + V + + C GL +F +R+ ++ + + G
Sbjct: 628 GSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLAD 687
Query: 226 ALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQH-YTCMV 284
A +L M +V+P + + +L AC + D GR+ SMVR+ +DP + Y +
Sbjct: 688 AEELIRCM--DVKPTVLVWKTLLGACRKYRDVDRGRL-ANSMVRE--LDPGDESAYVVLS 742
Query: 285 DLLGHSGRLDEACDLIMQMRVK 306
++L +G+ DEA ++ +M +
Sbjct: 743 NILAGAGKWDEAAEVRTEMESR 764
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/547 (38%), Positives = 313/547 (57%), Gaps = 43/547 (7%)
Query: 6 HPVLATKLV-HLYS--ACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
HP+LA L+ HL + A + L +P + F N ++R +A + VA+ L+
Sbjct: 55 HPLLAKHLLFHLAALKAPPLRYAVAVLSGLLPSPDPFSLNTVLRIFASSARPRVALALHR 114
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
R L PD T+P L+AC+ L A+ G +H + +N + VFV +L+ +Y C
Sbjct: 115 RHLA---PPDTHTYPPLLQACARLLALRYGEGLHAEACKNGLVSLVFVKNSLVHLYGACG 171
Query: 123 CVVNARQVFDKI-----------------------------------LERDPSEATLVTV 147
+A +VFD+I +E P T+V+V
Sbjct: 172 LFESAHRVFDEIPPPERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVEFAPDGFTVVSV 231
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR- 206
++A A+I L GR +H F + N AL+D+YAKCG V AR +F ++ R
Sbjct: 232 LTACAEIGVLALGRRVHVFVAKVGLVGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRT 291
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
VVSW ++I G A++G AL LF M ++++ P IT VGVL ACS GL D+G +F+
Sbjct: 292 VVSWTSLIVGLAVNGFGMDALQLFSMMEREKLMPTEITMVGVLYACSHCGLVDDGFRYFD 351
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
M +Y I P ++H CMVDLLG +GR++EA + I M ++P+ VW LL +C +H +
Sbjct: 352 QMKAEYGITPRIEHLGCMVDLLGRAGRVEEAHNYITTMPLEPNAVVWRTLLGACAMHKKL 411
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
++ E A +L+EL+P +G+YV+LSN+YA W V LRK M+ G++K+ S +E+
Sbjct: 412 EIGEAAWARLVELDPGHSGDYVLLSNLYAGVGRWADVHVLRKTMVTHGVRKNPGHSLVEL 471
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
+N + F+ GD SHP D+IY L + R++ GY+P T +V D+E++EK + + HS
Sbjct: 472 RNSVYEFVMGDRSHPETDQIYEMLGDIAERLRRQGYIPHTSNVLADIEDEEKESALNYHS 531
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
ERLAIAF L+ + GT + I KNL++C DCH+AIK ISK+ +REI VRD +R+HHFK G
Sbjct: 532 ERLAIAFALLKSLPGTPIRIVKNLRVCGDCHMAIKLISKVYDREIIVRDRSRFHHFKGGA 591
Query: 506 CSCGDYW 512
CSC DYW
Sbjct: 592 CSCKDYW 598
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/546 (37%), Positives = 307/546 (56%), Gaps = 40/546 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYA-WNGPYEVAIEL 60
G G ++ LV +Y+ L +A +LFDR+P+RN+ W ++ A A +G E A+
Sbjct: 110 GAGGGIFVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRF 169
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ G+ P+ +TF L AC + +H ++ ++DVFV ++LID Y K
Sbjct: 170 LVAMWRDGVAPNAYTFSSVLGACGTPGVLAA---LHASTVKVGLDSDVFVRSSLIDAYMK 226
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ R+VFD+++ RD ++ TL +V
Sbjct: 227 LGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSV 286
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A + L GR++H + +E ++ + AL+DMY KCG ++ A LF ++ ++ V
Sbjct: 287 LRACTGMVMLEAGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDV 344
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
+SW+ MI+G A +G S +AL +F+ MK E V P+ IT VGVL ACS GL ++G +F S
Sbjct: 345 ISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRS 404
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M + + I P +H+ CMVDLLG +G+LDEA + I M ++PD +W LL +C++H
Sbjct: 405 MKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGN 464
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
LA A ++++LEP D G V+LSN YA W K K M DRG+KK SWIE++
Sbjct: 465 LAAYAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELE 524
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
H F++GD SHP D I +L L GR+ GYVP TE V D+ ++K +++ HSE
Sbjct: 525 KHVHVFIAGDLSHPCSDTIVQELNRLIGRISALGYVPQTEFVLQDLAIEQKEDLLKYHSE 584
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
++AIAFG ++ G + I KNL+IC DCH K +SK R I +RD R+HHF+DG C
Sbjct: 585 KMAIAFGTMHAVGGKPIRIMKNLRICGDCHAFAKLVSKSEGRMIIIRDPVRFHHFQDGAC 644
Query: 507 SCGDYW 512
SCGDYW
Sbjct: 645 SCGDYW 650
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 141/352 (40%), Gaps = 60/352 (17%)
Query: 28 QLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP---------------- 71
LF R P+ L R P ++ ++ RL G P
Sbjct: 11 SLFKRPPRNRLAATRRSSRPVHTQPPPHPSLAIFSRLCVEGPFPAALALLPDLAAAGLRA 70
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDV--------IRNKWETDVFVGAALIDMYAKCSC 123
D + +K C +GR IH V +FV +L+ MYAK
Sbjct: 71 DPVSLTRLVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKFGL 130
Query: 124 VVNARQVFDKILERDPSEATLVTVISASAD----------IAALPQG------------- 160
+ +A ++FD++ ER+ T V A+AD +A G
Sbjct: 131 LDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSVLG 190
Query: 161 --------RELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
LH + + + +V V+++L+D Y K G + R +F+++ + +V WN+
Sbjct: 191 ACGTPGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNS 250
Query: 213 MITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
+I G+A G A++LF +MKD + T VL AC+ + + GR +++ Y
Sbjct: 251 IIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLK-Y 309
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
D + + ++D+ G L++A L +M + D W +++ +G
Sbjct: 310 ERDLIL--HNALLDMYCKCGSLEDAEALFHRMPQR-DVISWSTMISGLAQNG 358
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/545 (38%), Positives = 313/545 (57%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + LV++Y C+ +A +FD++ NL WN +I Y ++ A++L+
Sbjct: 392 GLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLF 451
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + G+ PD F L AC+ S + +H+ V + V +L++MYAK
Sbjct: 452 RTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKA 511
Query: 122 ---------------------SCVVN----------ARQVFDKI-LERDP-SEATLVTVI 148
+ ++N A + + K+ LE P + T ++V+
Sbjct: 512 GELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVL 571
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A +L +G+ +H + + +V VK AL +MY+KCG ++ AR +F+ + + V
Sbjct: 572 NACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAV 631
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWN M+ YA HG S + L L KM+ E V+ + ITFV VLS+CS GL EG +F S+
Sbjct: 632 SWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSL 691
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
D I+ +HY C+VDLLG +G+L EA I +M ++P W +LL +C++ +
Sbjct: 692 GHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDR 751
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
+LA KL+EL+P ++ V+LSNIY+ +W+ AKLR+ M R +KK S I+VKN
Sbjct: 752 GKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKN 811
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K H F D SHP EIY K++ L M+EAGYVP T+ V HDV+ ++K +++ HSE+
Sbjct: 812 KVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEK 871
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGLI+TP+ + L I KNL++C+DCH A KFISKIT REI VRD +R+HHF+DG CS
Sbjct: 872 LAIAFGLISTPETSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCS 931
Query: 508 CGDYW 512
C DYW
Sbjct: 932 CKDYW 936
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 174/376 (46%), Gaps = 37/376 (9%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T LV+ Y+ C L +A ++FD +P R++ WN +I AY+ + A ++ R+ + G
Sbjct: 199 TALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGER 258
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
D TF L AC ++ G+ + E + +E D+FVG ALI MYA+C +A QV
Sbjct: 259 CDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQV 318
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F ++ + + P+ T +++++ + L
Sbjct: 319 FGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGL 378
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
+ +H H + ++ ALV++Y +C AR +F+QL ++SWN+MI Y
Sbjct: 379 EELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIY 438
Query: 218 AMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
AL LF M+ + +QPD + F+ +L AC+ G R V + + S
Sbjct: 439 VQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGS-HGRTRKLVHQCVEESGLGGS 497
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL- 335
T +V++ +G LD A ++I+Q + W L+N LHG + A A +KL
Sbjct: 498 PLVQTSLVNMYAKAGELDVA-EVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQ 556
Query: 336 IELEPHDAGNYVILSN 351
+E P D ++ + N
Sbjct: 557 LEAIPVDKVTFISVLN 572
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 181/360 (50%), Gaps = 42/360 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNG-PYEVAIEL 60
GF + ++AT L+++Y C L +A +F+ + ++N+ WN ++ Y+ G +++A+EL
Sbjct: 88 GFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVEL 147
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+L G+ + TF L + A+ +G+ IH V ++ DVFV AL++ Y K
Sbjct: 148 FTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTK 207
Query: 121 CSCVVNARQVFDK---------------------------ILERDPSEA------TLVTV 147
C + +AR+VFD I +R E T +++
Sbjct: 208 CGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSI 267
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A + L G+ + FEL++ V TAL+ MYA+C + A +F ++++ +
Sbjct: 268 LDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNL 327
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSA-CSRGGLFDEGRMFFE 265
++W+A+IT +A HGH +AL F M+ E + P+ +TF+ +L+ + GL + R+
Sbjct: 328 ITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHL- 386
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN---SCKLH 322
++ ++ +D + +V++ G D+A + Q+ + P+ W +++ C+ H
Sbjct: 387 -LITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLEL-PNLISWNSMIGIYVQCERH 444
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 191/398 (47%), Gaps = 44/398 (11%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFT 75
+YS C L +A F +I RN+ WNV+I AY+ ++ A+ L++ +L G+ P+ T
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL 135
L +C + + +G +H + + + V AL++MY KC +++A+ VF+++
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 136 ERD----------------------------------PSEATLVTVISASADIAALPQGR 161
E++ + T + V+++ D AL +G+
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180
Query: 162 ELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHG 221
+H L+V V TALV+ Y KCG + AR +F+ + + V +WN+MI+ Y++
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240
Query: 222 HSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQH 279
S +A +F++M+ E + D +TF+ +L AC G+ ES+ + +D V
Sbjct: 241 RSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVG- 299
Query: 280 YTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
T ++ + ++A + +M+ + + W A++ + HGH A L ++++ E
Sbjct: 300 -TALITMYARCRSPEDAAQVFGRMK-QTNLITWSAIITAFADHGHCGEA-LRYFRMMQQE 356
Query: 340 ---PHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
P+ ++ L N + + E ++++ L+ + G+
Sbjct: 357 GILPNRV-TFISLLNGFTTPSGLEELSRIHLLITEHGL 393
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/559 (35%), Positives = 310/559 (55%), Gaps = 72/559 (12%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-EIGLVP 71
LV +Y C +FD + +R + +WN +I Y N AIEL+ ++ E+GL P
Sbjct: 329 LVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSP 388
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
++ T L AC + + IH V++ +E D +V AL+DMY++ + AR +F
Sbjct: 389 NSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIF 448
Query: 132 DKILERD---------------------------------------------------PS 140
+ +D P+
Sbjct: 449 GSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPN 508
Query: 141 EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
TL+TV+ A +AAL +G+E+H ++ + +V V +ALVDMYAKCG + ++R +FE
Sbjct: 509 SVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFE 568
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE------VQPDHITFVGVLSACSRG 254
Q+ + V++WN +I Y MHG +AL LF +M +E ++P+ +T++ + ++ S
Sbjct: 569 QMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHS 628
Query: 255 GLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK-PDPGVWG 313
G+ DEG F +M + I+P+ HY C+VDLLG SG+++EA +LI M W
Sbjct: 629 GMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWS 688
Query: 314 ALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRG 373
+LL +CK+H ++++ E+A + L L+P + +Y ++ R M ++G
Sbjct: 689 SLLGACKIHQNLEIGEIAAKNLFVLDP-NVLDYGTKQSMLGRK------------MKEKG 735
Query: 374 IKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVE 433
++K CSWIE ++ H FL+GD SHP E++ L+ L RMK+ GYVP T V H+V
Sbjct: 736 VRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVG 795
Query: 434 NDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVR 493
+EK M+C HSERLAIAFGL+NT GT + + KNL++C+DCH+A KFISKI +REI +R
Sbjct: 796 EEEKETMLCGHSERLAIAFGLLNTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILR 855
Query: 494 DVNRYHHFKDGICSCGDYW 512
DV R+HHF++G CSCGDYW
Sbjct: 856 DVRRFHHFRNGTCSCGDYW 874
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 180/426 (42%), Gaps = 63/426 (14%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
LV +Y+ ++ A LFD ++L WN +I + + N +E A+ + +L+ G+ P+
Sbjct: 227 LVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPN 286
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVI-RNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
T L ACS L + G+ IH V+ N + FVG AL+DMY C R VF
Sbjct: 287 GVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVF 346
Query: 132 DKILER----------------------------------DPSEATLVTVISASADIAAL 157
D + R P+ TL +V+ A +
Sbjct: 347 DGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESF 406
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
+H + FE + V+ AL+DMY++ G +++AR++F + K +VSWN MITGY
Sbjct: 407 LDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGY 466
Query: 218 AMHGHSTKALDLFEKMKD-------------------EVQPDHITFVGVLSACSRGGLFD 258
+ G AL+L M+ ++P+ +T + VL C+
Sbjct: 467 VVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALG 526
Query: 259 EGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
+G+ V+ + V + +VD+ G L+ + + QM V+ + W L+ +
Sbjct: 527 KGKEIHAYAVKQM-LSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVR-NVITWNVLIMA 584
Query: 319 CKLHGHVKLAELALEKLI-------ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMID 371
+HG + A +++ E+ P++ I +++ EG+ +
Sbjct: 585 YGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAK 644
Query: 372 RGIKKS 377
GI+ +
Sbjct: 645 HGIEPT 650
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 161/357 (45%), Gaps = 48/357 (13%)
Query: 3 FGFHPVLAT----KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAI 58
F F L T LV++Y C + A ++FD I R+ WN +I A +E+A+
Sbjct: 112 FKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAV 171
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSAL-SAIEEGRRIHEDVIRN-KWETDVFVGAALID 116
L+ +L + P +FT ACS L + + G+++H V+RN W T F AL+
Sbjct: 172 HLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDWRT--FTNNALVT 229
Query: 117 MYAKCSCVVNARQVFDKILERD---------------------------------PSEAT 143
MYAK V A+ +FD ++D P+ T
Sbjct: 230 MYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVT 289
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFEL-NVKVKTALVDMYAKCGLVKVARNLFEQL 202
L +V+ A + + L G+E+H F + + N V ALVDMY C + R +F+ +
Sbjct: 290 LASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGM 349
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEG 260
+ + WNAMI GY + +A++LF +M E + P+ +T VL AC R F +
Sbjct: 350 FRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDK 409
Query: 261 RMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
+V+ + D VQ+ ++D+ GR++ A + M K D W ++
Sbjct: 410 EGIHSCVVKWGFEKDKYVQN--ALMDMYSRMGRIEIARSIFGSMNRK-DIVSWNTMI 463
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 110/234 (47%), Gaps = 36/234 (15%)
Query: 54 YEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAA 113
+ AI Y ++ G+ PDNF FP LKA + + + G+++H V + V +
Sbjct: 66 FHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNS 125
Query: 114 LIDMYAKCSCVVNARQVFDKILERD---------------------------------PS 140
L++MY KC + AR+VFD+I RD P+
Sbjct: 126 LVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPT 185
Query: 141 EATLVTVISASAD-IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF 199
TLV+V A ++ I L G+++H F R+ + ALV MYAK G V A+ LF
Sbjct: 186 SFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLF 244
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACS 252
+ +K +VSWN +I+ + + +AL M + V+P+ +T VL ACS
Sbjct: 245 DVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACS 298
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 34/215 (15%)
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P V+ A+A I L G++LH ++ L V +LV+MY KCG + AR +
Sbjct: 83 PDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRV 142
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSR--GG 255
F+++ + VSWN+MI A+ LF M + V P T V V ACS G
Sbjct: 143 FDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLING 202
Query: 256 LF----------------------------DEGRMFFESMVRDYHIDPSVQHYTCMVDLL 287
L GR++ + D D + + ++ L
Sbjct: 203 LLLGKQVHAFVLRNGDWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSL 262
Query: 288 GHSGRLDEA---CDLIMQMRVKPDPGVWGALLNSC 319
+ R +EA +++Q V+P+ ++L +C
Sbjct: 263 SQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPAC 297
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ + LV +Y+ C CL+ + +F+++ RN+ WNVLI AY +G E A++L+ R++E G
Sbjct: 546 VGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEG 605
Query: 69 -----LVPDNFTFPFALKACSALSAIEEG 92
+ P+ T+ + S ++EG
Sbjct: 606 DNNREIRPNEVTYIAIFASLSHSGMVDEG 634
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/539 (38%), Positives = 308/539 (57%), Gaps = 27/539 (5%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MGF + +L T L+ Y+ L A ++F +P+R++ N +I A + +G E A L
Sbjct: 39 MGFEYDMILQTGLLDFYAKVGDLKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNL 98
Query: 61 YYRLLEIGLVPDNFTFPFALKA-----------CSALSAIEEGRRIHEDVIRNKW----- 104
+ + E N K C+ + + I + ++K
Sbjct: 99 FDNMTERNSCSWNSMITCYCKLGDINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQ 158
Query: 105 ETDVFVGAA--------LIDMYAKCSCVVNARQVFDKILERD--PSEATLVTVISASADI 154
E + +G+A +I Y +C A +F ++ + P+E T+V+++SA A +
Sbjct: 159 ELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHL 218
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
AL G +HG+ R +++V + AL+DMY KCG ++ A ++F L K + WN++I
Sbjct: 219 GALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSII 278
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
G M+G +A+ F M+ E ++PD +TFVG+LS CS GL G+ +F M+ Y +
Sbjct: 279 VGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGL 338
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
+P V+HY CMVDLLG +G L EA +LI M +KP+ V G+LL +C++H KL E +
Sbjct: 339 EPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQ 398
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
+L+EL+P D GNYV LSN+YA + W+ V RKLMI RG+ K+ CS IEV N H F+
Sbjct: 399 QLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFV 458
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
+GD SHP +I A L + +K G+VP T +V HD+E +EK I HSER+A+AFG
Sbjct: 459 AGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFG 518
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L++TP G + + KNL+ C DCH A+K IS +REI VRD R+HHF++G CSC DYW
Sbjct: 519 LMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 132/305 (43%), Gaps = 36/305 (11%)
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
+L ++P +F L++C+ + G H +++ +E D+ + L+D YAK
Sbjct: 1 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60
Query: 124 VVNARQVFDKILERDPSEATLVTVISASADIAALPQGREL-------HGFSW-------- 168
+ A++VF + RD +ISA + + + R L + SW
Sbjct: 61 LKCAKRVFMGMPRRDVVANN--AMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYC 118
Query: 169 --------RHRFELN----VKVKTALVDMYAKCGLVKVARNLFEQLREKR-VVSWNAMIT 215
R F+ N V A++D Y K + A+ LF + R V+WN MI+
Sbjct: 119 KLGDINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMIS 178
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
Y G A+ +F++M+ E V+P +T V +LSAC+ G D G + +R +
Sbjct: 179 AYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGE-WIHGYIRTKRLK 237
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
V ++D+ G L+ A D+ + K + W +++ ++G E A+
Sbjct: 238 IDVVLGNALIDMYCKCGALEAAIDVFHGLSRK-NIFCWNSIIVGLGMNGR---GEEAIAA 293
Query: 335 LIELE 339
I +E
Sbjct: 294 FIVME 298
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/553 (37%), Positives = 309/553 (55%), Gaps = 42/553 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQ--RNLFLWNVLIRAYAWNGPYEVAIE 59
GF + + L+ YS L A +F+ + + R+ WN +I AY + A+
Sbjct: 168 GFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALA 227
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
LY ++ G D FT L S + + G + H I+ + + VG+ LIDMYA
Sbjct: 228 LYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYA 287
Query: 120 KCSC-VVNARQVFDKILERD----------------------------------PSEATL 144
KC + +R+VF++I D P + +
Sbjct: 288 KCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSF 347
Query: 145 VTVISASADIAALPQGRELHGFSWRHRFELN-VKVKTALVDMYAKCGLVKVARNLFEQLR 203
V ISA +++++ QG++ H + + N + V ALV MY+KCG ++ AR LF+++
Sbjct: 348 VCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMP 407
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRM 262
+ V+ N++I GYA HG T++L+LFE+M + P IT V +LSAC+ G +EG+
Sbjct: 408 QHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKK 467
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
+F M + I+P +HY+CM+DLLG +G+L EA LI M P W ALL +C+ +
Sbjct: 468 YFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKY 527
Query: 323 GHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSW 382
G+++LAE A + ++LEP +A Y++L+++Y+ A WE A++RKLM DRGI+K CSW
Sbjct: 528 GNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSW 587
Query: 383 IEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVF---HDVENDEKAN 439
IE+ + H F++ D SHP EI+ L + +MK AGYVP F + EK
Sbjct: 588 IELNKRVHVFVAEDNSHPRIKEIHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEI 647
Query: 440 MICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYH 499
M+ HSE+LA+AFGL+ T G LL+ KNL+IC DCH AIKF+S I R+ITVRD R+H
Sbjct: 648 MLAHHSEKLAVAFGLLFTKHGEPLLVVKNLRICGDCHNAIKFMSAIARRKITVRDAYRFH 707
Query: 500 HFKDGICSCGDYW 512
F+DG CSCGDYW
Sbjct: 708 CFEDGRCSCGDYW 720
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 150/329 (45%), Gaps = 40/329 (12%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ Y+ +H AH LFD+IPQ +L +N LI AYA G A+ L+ + E+GLV D
Sbjct: 80 LIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMD 139
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
FTF + AC + + R++H + +++ V V +L+ Y+K + A VF+
Sbjct: 140 GFTFSGVITACC--NHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFN 197
Query: 133 KILERDPSEA-----------------------------------TLVTVISASADIAAL 157
+ E E TL +V++ + + L
Sbjct: 198 GMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDL 257
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGL-VKVARNLFEQLREKRVVSWNAMITG 216
G + H + + F N V + L+DMYAKCG + +R +FE++ +V WN MI+G
Sbjct: 258 SGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISG 317
Query: 217 YAMHGH-STKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
Y+ + S +AL+ F +M+ PD +FV +SACS +G+ F ++
Sbjct: 318 YSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPS 377
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
+ +V + G L +A L +M
Sbjct: 378 NQISVNNALVTMYSKCGNLQDARKLFQRM 406
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 134/337 (39%), Gaps = 62/337 (18%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L+ + LYS C+ L AH F++ + N+F +N LI AYA VA L+ ++ +
Sbjct: 45 LSNHFILLYSKCNLLTTAHHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPD 104
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
LV N LI+ YA ++A
Sbjct: 105 LVSFN---------------------------------------TLINAYADRGDTLSAL 125
Query: 129 QVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
+F ++ E T VI+A + L R+LH ++ F+ V VK +L+ Y
Sbjct: 126 SLFGEMREMGLVMDGFTFSGVITACCNHVGLI--RQLHSLAFSSGFDSYVSVKNSLLTYY 183
Query: 187 AKCGLVKVARNLFEQLRE--KRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHIT 243
+K G+++ A +F + E + VSWN+MI Y H KAL L+ M + D T
Sbjct: 184 SKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFT 243
Query: 244 FVGVLSACS-----RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
VL+ S GGL + ++ H+ ++D+ G
Sbjct: 244 LASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSG------LIDMYAKCGAGMSESR 297
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
+ + D VW +++ G+ + EL++E L
Sbjct: 298 KVFEEICGSDLVVWNTMIS-----GYSQNKELSVEAL 329
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 38/178 (21%)
Query: 75 TFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI 134
+F LK+C A + G+ +H +++ + ++ I +Y+KC+ + A
Sbjct: 10 SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAH------ 63
Query: 135 LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV 194
H F+ H E NV AL+ YAK L+ V
Sbjct: 64 -----------------------------HAFNQTH--EPNVFSFNALIAAYAKESLIHV 92
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSAC 251
A +LF+Q+ + +VS+N +I YA G + AL LF +M++ + D TF GV++AC
Sbjct: 93 AHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITAC 150
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
L G+ LH + + + + +Y+KC L+ A + F Q E V S+NA+I
Sbjct: 24 LLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTHEPNVFSFNALIAA 83
Query: 217 YAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSA-CSRGGLFDEGRMFFE 265
YA A LF+++ QPD ++F +++A RG +F E
Sbjct: 84 YAKESLIHVAHHLFDQIP---QPDLVSFNTLINAYADRGDTLSALSLFGE 130
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/539 (37%), Positives = 312/539 (57%), Gaps = 39/539 (7%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL-LEI 67
+ +LV Y+ +A +LFD +P ++L WN LI ++ +++ +Y + E+
Sbjct: 76 IGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSR--CLHMSLTAFYTMKFEM 133
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
+ P+ T + ACS A++ G+ IH I+ +V V +LI+MY K + +A
Sbjct: 134 SVKPNEVTILSMISACSG--ALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSA 191
Query: 128 RQVFDKI---------------------------------LERDPSEATLVTVISASADI 154
++F+ I L + E T++ ++ A +
Sbjct: 192 CRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHL 251
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
+HG + F + + TAL+D YAK G + + +F ++ V+W AM+
Sbjct: 252 GVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAML 311
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
GYA HG +A+ LFE M ++ ++PDH+TF +LSACS GL +EG+ +F M Y I
Sbjct: 312 AGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGI 371
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
+P V HY+CMVDLLG G L++A ++I M ++P+ GVWGALL +C++HG+++L + E
Sbjct: 372 EPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAE 431
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
LI +EP D NY++LSN+Y+ + +W+ AK+R L+ +RG+K++ S IE NK H F
Sbjct: 432 HLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFF 491
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD SHP ++IY+KL+ L G++++AGY TE V DVE + K +MI HSE+LAIAFG
Sbjct: 492 VGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFG 551
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+ + +G L+ITKNL+IC DCH K IS I +R I +RD R+HHF DG CSC DYW
Sbjct: 552 LLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 126/301 (41%), Gaps = 49/301 (16%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
L A ++ +I R IH V ++ D F+G L+ Y K +A ++FD + +D
Sbjct: 46 LIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDL 105
Query: 139 -------------------------------PSEATLVTVISASADIAALPQGRELHGFS 167
P+E T++++ISA + AL G+ +HGF
Sbjct: 106 VSWNSLISGFSRCLHMSLTAFYTMKFEMSVKPNEVTILSMISACS--GALDAGKYIHGFG 163
Query: 168 WRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKAL 227
+ L VKV +L++MY K G + A LFE + + VSWN++I +G + + +
Sbjct: 164 IKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGI 223
Query: 228 DLFEKMKD-EVQPDHITFVGVLSACSRGGLFD-----EGRMFFESMVRDYHIDPSVQHYT 281
D F KM+ ++ D T + +L AC G+ G MF + T
Sbjct: 224 DYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTG------FGAKITIAT 277
Query: 282 CMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LE 339
++D GRL + + ++ D W A+L HG + A E + LE
Sbjct: 278 ALLDTYAKLGRLSASYGVFTEVGF-ADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLE 336
Query: 340 P 340
P
Sbjct: 337 P 337
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 6/165 (3%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG +AT L+ Y+ L ++ +F + + W ++ YA +G AI+L+
Sbjct: 268 GFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLF 327
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGR---RIHEDVIRNKWETDVFVGAALIDMY 118
+ GL PD+ TF L ACS + EG+ + +V + D + + ++D+
Sbjct: 328 ESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHY--SCMVDLL 385
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGREL 163
+C + +A +V + +P+ ++ A + G+E+
Sbjct: 386 GRCGLLNDAYEVIQN-MPMEPNAGVWGALLGACRVHGNIELGKEV 429
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/504 (39%), Positives = 297/504 (58%), Gaps = 13/504 (2%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ ++ + A LF +P++N W+ +I Y +G E A ELY + +V +
Sbjct: 173 LISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVE 232
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
+K +E RI + + ++N + ++I Y + + +VF
Sbjct: 233 TAMLTGYMK----FGKVELAERIFQRMAVKN-----LVTWNSMIAGYVENCRAEDGLKVF 283
Query: 132 DKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC 189
++E P+ +L +V+ ++++ALP GR++H + + T+L+ MY KC
Sbjct: 284 KTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKC 343
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVL 248
G + A LF ++ K V++WNAMI+GYA HG KAL LF+KM++ ++PD ITFV V+
Sbjct: 344 GDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVI 403
Query: 249 SACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPD 308
AC+ G D G +F+SM +++ I+ HYTC++DLLG +GRLDEA LI +M P
Sbjct: 404 LACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPH 463
Query: 309 PGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKL 368
++G LL +C++H ++ LAE A L+ L+P A YV L+NIYA W+ VAK+RK+
Sbjct: 464 AAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKM 523
Query: 369 MIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESV 428
M + + K SWIE+K+ H F S D HP I+ KL L+G+MK AGYVP E
Sbjct: 524 MKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFA 583
Query: 429 FHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITER 488
HDVE + K ++ HSE+LAIAFGL+ T GT + + KNL++C DCH AIKFIS I +R
Sbjct: 584 LHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKR 643
Query: 489 EITVRDVNRYHHFKDGICSCGDYW 512
EI VRD R+HHF++G CSCGDYW
Sbjct: 644 EIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 106/239 (44%), Gaps = 18/239 (7%)
Query: 106 TDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHG 165
+DV I + + + +AR VF+K+ R + T T++S +A + +E H
Sbjct: 71 SDVVSLNKTIASFVRACDLESARNVFEKMSVR--TTVTWNTMLSGYTKVAG--KVKEAHE 126
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
+ +V LV Y + VK A F ++ K + SWN +I+G+A +G K
Sbjct: 127 LFDKIPEPDSVSYNIMLV-CYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQK 185
Query: 226 ALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
A DLF M ++ + +++ ++S G + ++++ SV T M+
Sbjct: 186 AFDLFSVMPEK---NGVSWSAMISGYVEHGDLEAAEELYKNVGMK-----SVVVETAMLT 237
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALL----NSCKLHGHVKLAELALEKLIELEP 340
G+++ A + +M VK + W +++ +C+ +K+ + +E + P
Sbjct: 238 GYMKFGKVELAERIFQRMAVK-NLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNP 295
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/549 (38%), Positives = 315/549 (57%), Gaps = 45/549 (8%)
Query: 6 HPVLATKLVHLYSACDC--LHNAHQLFDRI-PQRNL--FLWNVLIRAYAWNGPYEVAIEL 60
HP+LA L+ +A L A + R+ P L F N ++R A + VA+EL
Sbjct: 735 HPLLAKHLLFHLAALRAPPLRYAVAVLSRLLPHGPLDPFPLNTVLRIAAGSPRPRVALEL 794
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R L + PD T+P ++AC+ L A+ EG +H + +N + T VFV +L+ +Y
Sbjct: 795 HRRRLAL---PDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGA 851
Query: 121 CSCVVNARQVFDKILERD-----------------------------------PSEATLV 145
C +A +VFD++ R P T+V
Sbjct: 852 CGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIV 911
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+V++A A+ AL GR +H + + N V AL+D+YAKCG V AR +FE++
Sbjct: 912 SVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLG 971
Query: 206 R-VVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMF 263
R VVSW ++I G A +G +AL+LF M ++++ P IT VGVL ACS GL D+G +
Sbjct: 972 RTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRY 1031
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
F+ M DY I P ++H CMVDLLG +GR++EA D I+ M ++P+ VW LL SC +H
Sbjct: 1032 FDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHK 1091
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
++L ++A E+L+EL+P +G+YV+LSN+YA W V LRK M+ ++K+ S +
Sbjct: 1092 KLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLV 1151
Query: 384 EVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICC 443
E++N + F+ GD SHP ++IY L + R++ GY+P T +V D+E +EK +
Sbjct: 1152 ELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKETALNY 1211
Query: 444 HSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKD 503
HSERLAIAF L+ + G + I KNL++C DCH+A ISK+ +REI VRD +R+HHF+
Sbjct: 1212 HSERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRDRSRFHHFQG 1271
Query: 504 GICSCGDYW 512
G CSC DYW
Sbjct: 1272 GACSCKDYW 1280
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/539 (36%), Positives = 307/539 (56%), Gaps = 40/539 (7%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYA-WNGPYEVAIELYYRLLEI 67
++ L +Y+ L +A ++FD +P RN+ W ++ A A +G + A+ +
Sbjct: 106 VSNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRD 165
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ P+ +TF L AC+ + +H ++ ++DVFV ++LID Y K +
Sbjct: 166 GVAPNAYTFSSVLGACTTPGMLTA---VHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGG 222
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
R+VFD+++ RD ++ TL +V+ A +
Sbjct: 223 RRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGM 282
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L GR++H + ++ ++ + AL+DMY KCG ++ A LF ++ ++ V+SW+ M+
Sbjct: 283 VMLEAGRQVHAHVLK--YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMV 340
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+G A +G S +AL +F+ MK + V P+H+T VGVL ACS GL ++G +F SM R + I
Sbjct: 341 SGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGI 400
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P +H+ CMVDLLG +G+LDEA + I M ++PD +W LL +C++H + LA A
Sbjct: 401 QPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAR 460
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
++++LEP D G V+LSN YA W K K M DRG++K SWIE++ + H F+
Sbjct: 461 EILKLEPDDQGARVLLSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFI 520
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
+GD SHP D I +L L GR+K GYVP TE V D+ ++K +++ HSE++AI FG
Sbjct: 521 AGDLSHPCSDTIIQELNRLIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAIVFG 580
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++ DG + I KNL+IC DCH K +SK R I +RD R+HHF+DG CSCGDYW
Sbjct: 581 TMHAVDGKPIRIMKNLRICGDCHAFAKLVSKSEGRVIVIRDPVRFHHFQDGACSCGDYW 639
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 123/289 (42%), Gaps = 41/289 (14%)
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDV-----IRNKWETDVFVGAALIDMYAKCSCVVN 126
D + +K C + GR IH V + + +FV +L MYAK + +
Sbjct: 63 DPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLLDD 122
Query: 127 ARQVFDKILERDPSEATLVTVISASAD----------IAALPQG---------------- 160
A ++FD + R+ T V ASAD +A G
Sbjct: 123 ALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACT 182
Query: 161 -----RELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+H + + + +V V+++L+D Y K G + R +F+++ + +V WN++I
Sbjct: 183 TPGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIA 242
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+A G A++LF +MKD + T VL AC+ + + GR +++ D
Sbjct: 243 GFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK---YD 299
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+ + ++D+ G L++A L +M + D W +++ +G
Sbjct: 300 RDLILHNALLDMYCKCGSLEDADALFHRMPQR-DVISWSTMVSGLAQNG 347
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+L L+ +Y C L +A LF R+PQR++ W+ ++ A NG A+ ++ +
Sbjct: 303 ILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQ 362
Query: 68 GLVPDNFTFPFALKACSALSAIEEG 92
G+ P++ T L ACS +E+G
Sbjct: 363 GVAPNHVTMVGVLFACSHAGLVEDG 387
>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
Length = 533
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/534 (38%), Positives = 301/534 (56%), Gaps = 38/534 (7%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-EIGLVPDNF 74
+Y+ C + ++FD + ++L W +I AY E A+ L+ ++ E GL+ D+
Sbjct: 1 MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60
Query: 75 TFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI 134
A L ++ +H R ++ VG +++ M+ KC AR VFD +
Sbjct: 61 AVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMM 120
Query: 135 LERD---------------------------------PSEATLVTVISASADIAALPQGR 161
+ERD P+ T + ++SA A + GR
Sbjct: 121 MERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGR 180
Query: 162 ELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL--REKRVVSWNAMITGYAM 219
+ H F R E++ + AL+DMYAKCG ++ A +LF + E+ SWN +I+GY M
Sbjct: 181 KFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGM 240
Query: 220 HGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
HGH +AL+LF +M++E V+P+H TF +LSACS GL DEGR F M R + +
Sbjct: 241 HGHGKEALELFSRMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEMKR-LSVTLEDK 299
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
H+ C+VD+LG +G L EA DLI +M P GVWGALL +CK+HG+++L + A L++L
Sbjct: 300 HHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNMELGKTAASNLLQL 359
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDAS 398
EP+ G YV++SNIYA + W+ V KLR+ M ++G+KK A S IE F + D
Sbjct: 360 EPNHTGYYVLMSNIYAASNKWKEVWKLRQDMKNKGLKKPAAFSMIEYGKDILGFHTADQE 419
Query: 399 HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTP 458
+P E+Y K++ L MK AGYVP HDVE ++K M+ HSE+LA+AFG++
Sbjct: 420 NPYRHEVYKKMESLAIEMKMAGYVPDLSCALHDVEEEDKERMLNYHSEKLAVAFGVLKID 479
Query: 459 DGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
G + +TKNL++C+DCH A K+IS I +R+I VRD NR+HHF+ G CSC DYW
Sbjct: 480 PGMVIRVTKNLRVCNDCHSAFKYISHIYQRKIIVRDANRFHHFQGGTCSCKDYW 533
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 124/294 (42%), Gaps = 51/294 (17%)
Query: 2 GFGFHPVLATKL------VHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYE 55
G+ F L +L + +++ C A +FD + +R++ WN ++ Y NG
Sbjct: 83 GYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMMMERDVISWNSMLSGYTQNGQAT 142
Query: 56 VAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALI 115
A+ L+ + + P T + AC+ L GR+ H+ ++ ++ E D + AL+
Sbjct: 143 EALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGRKFHDFIVDSRMEIDTNLSNALM 202
Query: 116 DMYAKCSCVVNARQVFDKI--LER---------------------------------DPS 140
DMYAKC + A +F+ I ER +P+
Sbjct: 203 DMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGMHGHGKEALELFSRMQEEGVEPN 262
Query: 141 EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
T +++SA + + +GR+ R L K +VDM + GL++ A +L +
Sbjct: 263 HFTFTSILSACSHAGLIDEGRKCFAEMKRLSVTLEDKHHACVVDMLGRAGLLQEAFDLIK 322
Query: 201 QLREKRVVS-WNAMITGYAMHGH----STKALDLFEKMKDEVQPDHITFVGVLS 249
++ W A++ +HG+ T A +L +++P+H + ++S
Sbjct: 323 EMPSPPSDGVWGALLLACKIHGNMELGKTAASNLL-----QLEPNHTGYYVLMS 371
>gi|356534396|ref|XP_003535741.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g04780-like [Glycine max]
Length = 632
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/553 (37%), Positives = 322/553 (58%), Gaps = 42/553 (7%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + +T L+++YS C +H+ + D + ++L L N I A N A++L
Sbjct: 79 IGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKSLILXNTRIGALTQNAEDRKALKL 138
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
R+ + FT L C+ AI E ++H I+ +++ FV AL+ +YAK
Sbjct: 139 LIRMQREVTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVXTALLHVYAK 198
Query: 121 CSCVVNARQVFDKILERDP----------------SEATLV-----------------TV 147
CS + +A Q+F+ + E++ EA L+ +
Sbjct: 199 CSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHDEALLLFHNAQLMGFDQDPFNISSA 258
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR- 206
+SA A +A L +G+++H S + F N+ V ++L+DMYAKCG ++ A +FE E R
Sbjct: 259 VSACAGLATLVEGKQVHAMSHKSGFGSNIYVASSLIDMYAKCGCIREAYLVFEGFVEVRS 318
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+V WNAMI+G+A H + +A+ LFEKM+ PD +T+V VL+ACS GL +EG+ +F+
Sbjct: 319 IVLWNAMISGFARHALAQEAMILFEKMQQRGFFPDDVTYVSVLNACSHMGLHEEGQKYFD 378
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN-------S 318
MVR +++ PSV HY+CM+D+LG +G + +A DLI +M +WG++ S
Sbjct: 379 LMVRQHNLSPSVLHYSCMIDILGRAGLVQKAYDLIGRMSFNATSSMWGSVRGLSXLIKAS 438
Query: 319 CKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
C+++G+++ AE+A + L E+EP++AGN+++L+NIYA + VA+ RKL+ + ++K
Sbjct: 439 CRIYGNIEFAEIAAKHLFEMEPNNAGNHILLANIYAANKKSDEVARARKLLRETDVRKER 498
Query: 379 ACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKA 438
SWIE+KNK H+F G+ +HP D+ YAKL L +K+ Y T + HDVE K
Sbjct: 499 GTSWIEIKNKIHSFTVGERNHPQIDDNYAKLDNLVVELKKLNYKVDTNNDLHDVEESRKH 558
Query: 439 NMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRY 498
++ HSE+LAI FGL+ P + I KNL+IC DCH +K +SK REI VRD NR+
Sbjct: 559 MLLGHHSEKLAITFGLVCLPTEIPIRIIKNLRICGDCHTFMKLVSKFASREIIVRDTNRF 618
Query: 499 HHFKDGICSCGDY 511
HHFKDG+CSCG++
Sbjct: 619 HHFKDGLCSCGEF 631
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 41/295 (13%)
Query: 78 FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL-- 135
+ L+ C+ + GR H +IR E D+ LI+MY+KCS V + R+ D++L
Sbjct: 55 YLLQLCAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVK 114
Query: 136 ------------------------------ERDP-SEATLVTVISASADIAALPQGRELH 164
E P +E T+ +V+ A A+ + +LH
Sbjct: 115 SLILXNTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILECMQLH 174
Query: 165 GFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST 224
FS + + N V TAL+ +YAKC +K A +FE + EK V+W++M+ GY +G
Sbjct: 175 AFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHD 234
Query: 225 KALDLF---EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYT 281
+AL LF + M + P +I+ +SAC+ EG+ +M ++ +
Sbjct: 235 EALLLFHNAQLMGFDQDPFNIS--SAVSACAGLATLVEGKQ-VHAMSHKSGFGSNIYVAS 291
Query: 282 CMVDLLGHSGRLDEACDLIMQMRVKPDPGV-WGALLNSCKLHGHVKLAELALEKL 335
++D+ G + EA L+ + V+ V W A+++ H + A + EK+
Sbjct: 292 SLIDMYAKCGCIREAY-LVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKM 345
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/551 (37%), Positives = 311/551 (56%), Gaps = 41/551 (7%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNG-PYEVAIE 59
+G ++ L+ LY+ L ++F + +R+ WN +I A A +G AIE
Sbjct: 233 LGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIE 292
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
++ ++ G P+ TF L S+LS + +IH +++ + D + AL+ Y
Sbjct: 293 VFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYG 352
Query: 120 KCSCVVNARQVFDKILERDPSEA----------------------------------TLV 145
K + N ++F ++ ER + T
Sbjct: 353 KSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFA 412
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
TV+SA A +A L G E+H + R E +V + +ALVDMY+KCG + A F + +
Sbjct: 413 TVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVR 472
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFF 264
+ SWN+MI+GYA HGH AL LF +MK Q PDHITFVGVLSACS GL DEG +F
Sbjct: 473 NLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYF 532
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+SM Y + P V+HY+CMVDLLG +G LD+ + I +M +KP+ +W +L +C G+
Sbjct: 533 KSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGAC-CRGN 591
Query: 325 VKLAEL---ALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
+ EL A E L ++P +A NYV+LSN+YA WE +A+ R+ M + +KK CS
Sbjct: 592 GRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCS 651
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMI 441
W+ +K+ H F++GD SHP IYAKLK L+ ++++AGYVP + +D+E + K ++
Sbjct: 652 WVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVPQIKFALYDLEPENKEELL 711
Query: 442 CCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF 501
HSE+LA+AF ++ G + I KNL++C DCH A K+ISK+ +R I +RD NR+HHF
Sbjct: 712 SYHSEKLAVAF-VLTRNSGLPIRIMKNLRVCGDCHSAFKYISKVVDRSIVLRDSNRFHHF 770
Query: 502 KDGICSCGDYW 512
+DG CSC DYW
Sbjct: 771 EDGKCSCRDYW 781
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 167/356 (46%), Gaps = 44/356 (12%)
Query: 2 GFGFHPVLATKLVHLY-SACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
GF L L+++Y DC+ +A +LFD +P RN W LI Y NG E A +
Sbjct: 30 GFDSDLFLCNTLINVYVRIGDCV-SARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGV 88
Query: 61 YYRLLEIGLVPDNFTFPFALKACS-ALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMY 118
++ G +P+ F F A++AC ++ +GR++H IR + V VG LI+MY
Sbjct: 89 LKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMY 148
Query: 119 AKCSCVVNARQVFDKILERD---------------------------------PSEATLV 145
AKC + +AR VF ++++D PS L+
Sbjct: 149 AKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALI 208
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+ +S+ A + + G++ HG + +++V V L+ +YA+ + + +F + E+
Sbjct: 209 SALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLER 268
Query: 206 RVVSWNAMITGYAMHGHS-TKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMF 263
VSWN +I A G S ++A+++F E M+ P+ +TF+ +L+ S ++
Sbjct: 269 DQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSS---LSTSKLS 325
Query: 264 FE--SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
+ +++ Y++ ++ G SG ++ ++ +M + D W ++++
Sbjct: 326 HQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMIS 381
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 161/352 (45%), Gaps = 38/352 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+++Y+ C + +A +F + ++ WN +I N +E A++ Y + + G
Sbjct: 140 VGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTG 199
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L+P NF AL +C++L I G++ H + I+ + DV V L+ +YA+ S + +
Sbjct: 200 LMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQ 259
Query: 129 QVFDKILERD----------------------------------PSEATLVTVISASADI 154
+VF +LERD P+ T + +++ + +
Sbjct: 260 KVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSL 319
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR-VVSWNAM 213
+ ++H ++ + + ++ AL+ Y K G ++ +F ++ E+R VSWN+M
Sbjct: 320 STSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSM 379
Query: 214 ITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I+GY + KA+DL M Q D TF VLSAC+ + G +R
Sbjct: 380 ISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRAC- 438
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
++ V + +VD+ GR+D A M V+ + W ++++ HGH
Sbjct: 439 LESDVVIGSALVDMYSKCGRIDYASRFFNLMPVR-NLYSWNSMISGYARHGH 489
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 157/356 (44%), Gaps = 49/356 (13%)
Query: 95 IHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---------------- 138
H +V+++ +++D+F+ LI++Y + V+AR++FD++ +R+
Sbjct: 22 FHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGM 81
Query: 139 -----------------PSEATLVTVISASAD-IAALPQGRELHGFSWRHRF-ELNVKVK 179
P+ + I A + + +GR++HG++ R + V V
Sbjct: 82 PEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVG 141
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQ 238
L++MYAKCG + AR++F + +K VSWN+MITG + A+ + M K +
Sbjct: 142 NGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLM 201
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
P + + LS+C+ G G+ ++ +D V ++ L + RL E C
Sbjct: 202 PSNFALISALSSCASLGCILLGQQTHGEGIK-LGLDMDVSVSNTLLALYAETSRLAE-CQ 259
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHD-AGNYVILSNIYARAA 357
+ ++ D W ++ + G ++E A+E +E+ + N V N+ A +
Sbjct: 260 KVFSWMLERDQVSWNTVIGALADSG-ASVSE-AIEVFLEMMRAGWSPNRVTFINLLATVS 317
Query: 358 NWEGVA---KLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
+ ++ L++ +K A ++N A NC+EI++++
Sbjct: 318 SLSTSKLSHQIHALILKYNVKDDNA-----IENALLACYGKSGEMENCEEIFSRMS 368
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/582 (37%), Positives = 315/582 (54%), Gaps = 71/582 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+HLYS L+ A LFD R+L +N +I+ YA E A+ L+
Sbjct: 141 GFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLF 200
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN--KWETDVFVGAALIDMYA 119
+ G++PD FTF CS L+ G++IH V +N ++++ + +A++DMYA
Sbjct: 201 GEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYA 260
Query: 120 KCSCV-------------------------------VN-ARQVFDKILERD--------- 138
KC + +N AR++F+ + ERD
Sbjct: 261 KCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMIS 320
Query: 139 ------------------------PSEATLVTVISASADIAALPQGREL-HGFSWRHRFE 173
P E TLV V+SA A + A G+ L H + F
Sbjct: 321 GYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFN 380
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLFEQLRE--KRVVSWNAMITGYAMHGHSTKALDLF- 230
N + A++DMYAKCG + A +F ++ + K +N+MI G A HG A+ +F
Sbjct: 381 QNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFR 440
Query: 231 EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
E + ++PD +TFVGVL AC GL +EG+ FESM Y I P ++HY CMVDLLG
Sbjct: 441 ELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRY 500
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
G L+EA DL+ +M + + +W ALL++C+ HG+VK+ E+A +KL+E+E YV+LS
Sbjct: 501 GCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLS 560
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
NI A A WE ++RK+M D GI+K S+IE+ H F++ D SHP EI LK
Sbjct: 561 NILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLK 620
Query: 411 WLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLK 470
+ R+K AGYVP T V D++ +EK +++ HSE+LA+AFGL+ + I KNL+
Sbjct: 621 DMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLR 680
Query: 471 ICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
IC DCH A K +S+I REITVRD R+HHF++G CSC D+W
Sbjct: 681 ICADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 197/401 (49%), Gaps = 76/401 (18%)
Query: 11 TKLVHLYS---ACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++L+ +S + D L ++ LF +I NLF+WN +IR Y+ + AI LY ++
Sbjct: 45 SRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAK 104
Query: 68 GLVP-DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
G+ P +NFTFPF L +C+ LS++E G +H +I++ +E+D+FV ALI +Y+ +
Sbjct: 105 GIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNL 164
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISASAD 153
AR +FD+ L RD P E T V + S +
Sbjct: 165 ARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSV 224
Query: 154 IAALPQGRELHGFSWRH--RFELNVKVKTALVDMYAKCGL-------------------- 191
+ G+++H +++ + N+ +K+A+VDMYAKCGL
Sbjct: 225 LNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAW 284
Query: 192 ------------VKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQ 238
+ VAR LF + E+ V+SW AMI+GY+ G ++AL+LF++M+ ++
Sbjct: 285 SSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIK 344
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
PD +T V VLSAC+R G FD G+ + + + + + ++D+ G +D A +
Sbjct: 345 PDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALE 404
Query: 299 LIMQMRVKPDPG-VWGALLNSCKLHGHVKLAELALEKLIEL 338
+ ++ G V+ +++ HG L E A+ EL
Sbjct: 405 IFRRVGKNMKTGFVFNSMIAGLAQHG---LGETAITVFREL 442
>gi|358347383|ref|XP_003637737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503672|gb|AES84875.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 561
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/507 (37%), Positives = 302/507 (59%), Gaps = 3/507 (0%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T LV +Y DCL A + R +N+ WN LI Y++ G + A++L +++E G
Sbjct: 55 VCTSLVDMYVKNDCLEKAQAVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEG 114
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD T+ + S I+E I + + +V ALI ++ ++A
Sbjct: 115 ITPDLVTWNGLVSGYSMQGRIDEALTIINRIKSSGITPNVVSWTALISGCSQNEKYMDAL 174
Query: 129 QVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
++F ++ + P+ T+ +++ A A + L +G ELH FS + F ++ V TAL+DMY
Sbjct: 175 KIFSQMQAENVKPNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVDDIYVATALIDMY 234
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFV 245
++ G +KVA N+F +++EK + WN M+ GYA+H H + + L++KM++ ++PD ITF
Sbjct: 235 SEAGKLKVAYNVFNKIQEKTLPCWNCMMMGYAIHSHGEEVMILYDKMRERHIRPDAITFT 294
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
+LSAC GL DEG +F+SM DY+I P+++HY CMVDLLG SG LDEA I M +
Sbjct: 295 ALLSACKNSGLVDEGWKYFDSMQEDYNIVPTIEHYCCMVDLLGKSGFLDEASHFIETMPI 354
Query: 306 KPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKL 365
KPD +WGALL SCK+H ++KLAE+A KL ++EP+++ NYV++ N+Y+ W V +L
Sbjct: 355 KPDASIWGALLASCKIHKNIKLAEIAARKLFKMEPNNSANYVLMMNLYSSLNRWVAVERL 414
Query: 366 RKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGT 425
+ M +K SW +V H F + HP EIY +L L +++ GY P
Sbjct: 415 KHSMTVLAMKIPPVWSWTQVNQSIHVFSTEGRPHPEEGEIYFELYQLISEIRKLGYAPDL 474
Query: 426 ESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKI 485
V +++++EK ++ H+E+LA+ +G++ G+ + I KN +IC DCH K+IS +
Sbjct: 475 NCVCQNIDDNEKEKILMSHTEKLAMVYGVMKMKGGSPIRIVKNTRICFDCHTVAKYISLV 534
Query: 486 TEREITVRDVNRYHHFKDGICSCGDYW 512
+REI +RD R+HHFK+G C+C D W
Sbjct: 535 RKREILLRDGGRFHHFKNGKCACNDRW 561
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 96/185 (51%), Gaps = 5/185 (2%)
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P ++ + + A ++ G+E+HG+ R +V V T+LVDMY K ++ A+ +
Sbjct: 16 PDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYVCTSLVDMYVKNDCLEKAQAV 75
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLF 257
+ + K V +WN++I+GY+ G +A+ L +M +E + PD +T+ G++S S G
Sbjct: 76 LHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWNGLVSGYSMQGRI 135
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWGA 314
DE ++ I P+V +T ++ + + +A + QM+ VKP+ +
Sbjct: 136 DEALTIINR-IKSSGITPNVVSWTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTICS 194
Query: 315 LLNSC 319
LL +C
Sbjct: 195 LLCAC 199
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 129/282 (45%), Gaps = 9/282 (3%)
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ L +G PD+ + AL+A L + G+ IH ++R+ DV+V +L+DMY K
Sbjct: 6 FRSLHSLGFKPDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYVCTSLVDMYVK 65
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
C+ A+ V + ++ + ++IS + + +L ++
Sbjct: 66 NDCLEKAQAVLHR--AKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWN 123
Query: 181 ALVDMYAKCGLVKVARNLFEQLREK----RVVSWNAMITGYAMHGHSTKALDLFEKMKDE 236
LV Y+ G + A + +++ VVSW A+I+G + + AL +F +M+ E
Sbjct: 124 GLVSGYSMQGRIDEALTIINRIKSSGITPNVVSWTALISGCSQNEKYMDALKIFSQMQAE 183
Query: 237 -VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
V+P+ T +L AC+ L +G ++ +D + T ++D+ +G+L
Sbjct: 184 NVKPNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVD-DIYVATALIDMYSEAGKLKV 242
Query: 296 ACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
A ++ +++ K P W ++ +H H + + +K+ E
Sbjct: 243 AYNVFNKIQEKTLP-CWNCMMMGYAIHSHGEEVMILYDKMRE 283
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF +AT L+ +YS L A+ +F++I ++ L WN ++ YA + E + L
Sbjct: 218 LGFVDDIYVATALIDMYSEAGKLKVAYNVFNKIQEKTLPCWNCMMMGYAIHSHGEEVMIL 277
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
Y ++ E + PD TF L AC ++EG
Sbjct: 278 YDKMRERHIRPDAITFTALLSACKNSGLVDEG 309
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/549 (38%), Positives = 315/549 (57%), Gaps = 45/549 (8%)
Query: 6 HPVLATKLVHLYSACDC--LHNAHQLFDRI-PQRNL--FLWNVLIRAYAWNGPYEVAIEL 60
HP+LA L+ +A L A + R+ P L F N ++R A + VA+EL
Sbjct: 47 HPLLAKHLLFHLAALRAPPLRYAVAVLSRLLPHGPLDPFPLNTVLRIAAGSPRPRVALEL 106
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R L + PD T+P ++AC+ L A+ EG +H + +N + T VFV +L+ +Y
Sbjct: 107 HRRRLAL---PDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGA 163
Query: 121 CSCVVNARQVFDKILERD-----------------------------------PSEATLV 145
C +A +VFD++ R P T+V
Sbjct: 164 CGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIV 223
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+V++A A+ AL GR +H + + N V AL+D+YAKCG V AR +FE++
Sbjct: 224 SVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLG 283
Query: 206 R-VVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMF 263
R VVSW ++I G A +G +AL+LF M ++++ P IT VGVL ACS GL D+G +
Sbjct: 284 RTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRY 343
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
F+ M DY I P ++H CMVDLLG +GR++EA D I+ M ++P+ VW LL SC +H
Sbjct: 344 FDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHK 403
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
++L ++A E+L+EL+P +G+YV+LSN+YA W V LRK M+ ++K+ S +
Sbjct: 404 KLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLV 463
Query: 384 EVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICC 443
E++N + F+ GD SHP ++IY L + R++ GY+P T +V D+E +EK +
Sbjct: 464 ELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKETALNY 523
Query: 444 HSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKD 503
HSERLAIAF L+ + G + I KNL++C DCH+A ISK+ +REI VRD +R+HHF+
Sbjct: 524 HSERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRDRSRFHHFQG 583
Query: 504 GICSCGDYW 512
G CSC DYW
Sbjct: 584 GACSCKDYW 592
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/527 (38%), Positives = 318/527 (60%), Gaps = 40/527 (7%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y++ + +A ++FD IP +++ WN +I YA G Y+ A+EL+ +++ +
Sbjct: 145 TALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVK 204
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD T + AC+ +IE GR++H + + + +++ + ALID+Y+KC V A ++
Sbjct: 205 PDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACEL 264
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
+ + +D P++ T+++++ A A + A+
Sbjct: 265 LEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 324
Query: 158 PQGRELHGFSWRHRFELNV----KVKTALVDMYAKCGLVKVARNLFEQLREKRVVS-WNA 212
GR +H + + + V ++T+L+DMYAKCG + A + + R +S WNA
Sbjct: 325 DIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNA 384
Query: 213 MITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
MI G+AMHG + A D+F +M K+ ++PD ITFVG+LSACS G+ D GR F SM +DY
Sbjct: 385 MIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDY 444
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
+I P ++HY CM+DLLGHSG EA ++I M ++PD +W +LL +CK+HG+++L E
Sbjct: 445 NITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESF 504
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI-ACSWIEVKNKAH 390
+KLI++EP + G+YV+LSNIYA A W V K+R L+ D+G+KK + CS IE+ + H
Sbjct: 505 AKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVH 564
Query: 391 AFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAI 450
F+ GD HP EIY L+ +E ++EAG+VP T V ++E + K + HSE+LAI
Sbjct: 565 EFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAI 624
Query: 451 AFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNR 497
AFGLI+T GT+L I KNL++C +CH A K ISKI +REI RD R
Sbjct: 625 AFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 671
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 176/376 (46%), Gaps = 68/376 (18%)
Query: 21 DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
D L A +F+ IP+ N +WN++ R +A + A++LY ++ +GL+P+ FTFPF L
Sbjct: 23 DGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLL 82
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS------------------ 122
K+C+ +EG++IH V++ ++ D++V +LI MYA+
Sbjct: 83 KSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVV 142
Query: 123 -------------CVVNARQVFDKILERD------------------------------- 138
+ +A+++FD+I +D
Sbjct: 143 SYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTN 202
Query: 139 --PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
P E+T+ TV+SA A ++ GR++H + H F N+K+ AL+D+Y+KCG V+ A
Sbjct: 203 VKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETAC 262
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGG 255
L E L K V+SWN +I GY +AL LF++M + P+ +T + +L AC+ G
Sbjct: 263 ELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 322
Query: 256 LFDEGR---MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
D GR ++ + ++ + + T ++D+ G +D A + W
Sbjct: 323 AIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTW 382
Query: 313 GALLNSCKLHGHVKLA 328
A++ +HG A
Sbjct: 383 NAMIFGFAMHGRANAA 398
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 137/310 (44%), Gaps = 28/310 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + + L+ LYS C + A +L + + +++ WN LI Y Y+ A+ L+
Sbjct: 237 GFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLF 296
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGA-----ALID 116
+L G P++ T L AC+ L AI+ GR IH I K + V A +LID
Sbjct: 297 QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHV-YIDKKLKGVVVTNASSLRTSLID 355
Query: 117 MYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALP-QGRELHGFSWRHRFELN 175
MYAKC + A QV D S A ++ + +A I GR F R N
Sbjct: 356 MYAKCGDIDAAPQVSD-------SSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKN 408
Query: 176 --VKVKTALVDMYAKC---GLVKVARNLFEQLREKRVVS-----WNAMITGYAMHGHSTK 225
V + + C G++ + RN+F +R+ ++ + MI G +
Sbjct: 409 GIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKE 468
Query: 226 ALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
A ++ M ++PD + + +L AC G + G F + +++ +P Y + +
Sbjct: 469 AEEMINTMP--MEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPG--SYVLLSN 524
Query: 286 LLGHSGRLDE 295
+ +G+ +E
Sbjct: 525 IYATAGKWNE 534
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 84/182 (46%), Gaps = 6/182 (3%)
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSR 253
A ++FE + E + WN M G+A+ AL L+ M + P+ TF +L +C++
Sbjct: 28 AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87
Query: 254 GGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWG 313
F EG+ +++ D + +T ++ + +GRL++A + D +
Sbjct: 88 SKTFKEGQQIHGHVLK-LGFDLDLYVHTSLISMYAQNGRLEDA-QKVFDRSSHRDVVSYT 145
Query: 314 ALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRG 373
AL+ G+++ A+ + E+ D ++ + + YA N++ +L K M+
Sbjct: 146 ALITGYASRGYIESAQKMFD---EIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTN 202
Query: 374 IK 375
+K
Sbjct: 203 VK 204
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/539 (37%), Positives = 312/539 (57%), Gaps = 39/539 (7%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL-LEI 67
+ +LV Y+ +A +LFD +P ++L WN LI ++ +++ +Y + E+
Sbjct: 76 IGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSR--CLHMSLTAFYTMKFEM 133
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
+ P+ T + AC+ A++ G+ IH I+ +V V +LI+MY K + +A
Sbjct: 134 SVKPNEVTILSMISACNG--ALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSA 191
Query: 128 RQVFDKI---------------------------------LERDPSEATLVTVISASADI 154
++F+ I L + E T++ ++ A +
Sbjct: 192 CRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHL 251
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
+HG + F + + TAL+D YAK G + + +F ++ V+W AM+
Sbjct: 252 GVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAML 311
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
GYA HG +A+ LFE M ++ ++PDH+TF +LSACS GL +EG+ +F M Y I
Sbjct: 312 AGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGI 371
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
+P V HY+CMVDLLG G L++A ++I M ++P+ GVWGALL +C++HG+++L + E
Sbjct: 372 EPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELGKEVAE 431
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
LI +EP D NY++LSN+Y+ + +W+ AK+R L+ +RG+K++ S IE NK H F
Sbjct: 432 HLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGYSSIEYGNKNHHFF 491
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD SHP ++IY+KL+ L G++++AGY TE V DVE + K +MI HSE+LAIAFG
Sbjct: 492 VGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFG 551
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+ + +G L+ITKNL+IC DCH K IS I +R I +RD R+HHF DG CSC DYW
Sbjct: 552 LLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 125/301 (41%), Gaps = 49/301 (16%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
L A ++ +I R IH V ++ D F+G L+ Y K +A ++FD + +D
Sbjct: 46 LIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDL 105
Query: 139 -------------------------------PSEATLVTVISASADIAALPQGRELHGFS 167
P+E T++++ISA AL G+ +HGF
Sbjct: 106 VSWNSLISGFSRCLHMSLTAFYTMKFEMSVKPNEVTILSMISACN--GALDAGKYIHGFG 163
Query: 168 WRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKAL 227
+ L VKV +L++MY K G + A LFE + + VSWN++I +G + + +
Sbjct: 164 IKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGI 223
Query: 228 DLFEKMKD-EVQPDHITFVGVLSACSRGGLFD-----EGRMFFESMVRDYHIDPSVQHYT 281
D F KM+ ++ D T + +L AC G+ G MF + T
Sbjct: 224 DYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTG------FGAKITIAT 277
Query: 282 CMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LE 339
++D GRL + + ++ D W A+L HG + A E + LE
Sbjct: 278 ALLDTYAKLGRLSASYGVFTEVGF-ADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLE 336
Query: 340 P 340
P
Sbjct: 337 P 337
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 6/165 (3%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG +AT L+ Y+ L ++ +F + + W ++ YA +G AI+L+
Sbjct: 268 GFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLF 327
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGR---RIHEDVIRNKWETDVFVGAALIDMY 118
+ GL PD+ TF L ACS + EG+ + +V + D + + ++D+
Sbjct: 328 ESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHY--SCMVDLL 385
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGREL 163
+C + +A +V + +P+ ++ A + G+E+
Sbjct: 386 GRCGLLNDAYEVIQN-MPMEPNAGVWGALLGACRVHGNIELGKEV 429
>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
Length = 617
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/548 (38%), Positives = 305/548 (55%), Gaps = 36/548 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF +A+ L +YS C L A ++FD++PQ++ W +I YA NG E A+
Sbjct: 70 LGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLS 129
Query: 61 YYRLLEIGLV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
+ + GLV D F L A L + IH V + +E +V V ALIDMYA
Sbjct: 130 FRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYA 189
Query: 120 KCSCVVNARQVF----------------DKILERD------------------PSEATLV 145
K V +A +V D +E D P+E T
Sbjct: 190 KSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFS 249
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
++I A A L QG +LH + + V + LVDMY KCGL+ ++ LF ++ +
Sbjct: 250 SMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYR 309
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
++WNA+I +A HGH +A+ F++M ++P+HI FV +L+ACS GL DEG +F
Sbjct: 310 TDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYF 369
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
SM + I+P +HY+C++D G +GRLDEA I +M +KP+ W +LL +C++ G
Sbjct: 370 YSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGS 429
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
+L E+A + L++LEP + G +V LS IYA WE V +RKLM D IKK SW++
Sbjct: 430 KELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVD 489
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
K H F S D SHP +IY KL+ L R+KE GY+P T + ++E+ K ++ H
Sbjct: 490 SNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYH 549
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SER+A+AF LI+ P +++ KNL+IC DCH A KFI K+ R+I VRD +R+HHF +G
Sbjct: 550 SERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNG 609
Query: 505 ICSCGDYW 512
CSCGDYW
Sbjct: 610 RCSCGDYW 617
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 154/340 (45%), Gaps = 38/340 (11%)
Query: 33 IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+P+RN W L+ + N + A+ + + G+ P F A +A +AL A G
Sbjct: 1 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60
Query: 93 RRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD-------------- 138
++H +R ++T++FV + L DMY+KC + A +VFD++ ++D
Sbjct: 61 AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120
Query: 139 --------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
+ +V+SAS + + +H + FEL V V
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAV 180
Query: 179 KTALVDMYAKCGLVKVARNLFE-QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE- 236
+ AL+DMYAK V+ A + + VVS +MI GY +AL ++ +++ +
Sbjct: 181 RNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQG 240
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
V+P+ TF ++ C+ L ++G +++ I S T +VD+ G G + +
Sbjct: 241 VEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGST-LVDMYGKCGLISLS 299
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
L ++ + D W A++N HGH + A A +++I
Sbjct: 300 MQLFNEIEYRTDIA-WNAVINVFAQHGHGREAIQAFDRMI 338
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 86/182 (47%), Gaps = 12/182 (6%)
Query: 162 ELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHG 221
+LH R F+ + V + L DMY+KCGL+ A +F+Q+ +K V+W AMI GYA +G
Sbjct: 62 QLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 121
Query: 222 HSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEG-RMFFESMVRDYHIDPSVQ 278
A+ F MK E V D F VLSA GGL D V + V
Sbjct: 122 SLEAAVLSFRDMKREGLVGADQHVFCSVLSA--SGGLKDGWLSKSIHCCVTKAGFELEVA 179
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL--AELALEKLI 336
++D+ S ++ A ++ K DPG W + + + G+++ E AL +
Sbjct: 180 VRNALIDMYAKSMDVESASRVL-----KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYV 234
Query: 337 EL 338
EL
Sbjct: 235 EL 236
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/548 (38%), Positives = 308/548 (56%), Gaps = 36/548 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF +A+ L +YS L A ++FD++PQ++ W +I YA NG E A+
Sbjct: 148 LGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIA 207
Query: 61 YYRLLEIGLV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
+ + GLV D L A L R IH V+++ +E +V V AL DMYA
Sbjct: 208 FRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYA 267
Query: 120 KCS----------------CVVNARQVFDKILERD------------------PSEATLV 145
K + VV+A + D +E D P+E T
Sbjct: 268 KAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFS 327
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
++I A A L QG +LH + + V + L+DMY KCGL+ ++ LF+++
Sbjct: 328 SMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYH 387
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF 264
++WNA I A HGH +A+ F++M ++P+HITFV +L+ACS GL DEG +F
Sbjct: 388 TDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYF 447
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
SM + I+P +HY+C++D+ G +GRLDEA I +M VKP+ W +LL +C++ G+
Sbjct: 448 YSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGN 507
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
+L E+A + +++LEP + G +V LS IYA WE V +RKLM D IKK SW++
Sbjct: 508 KELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVD 567
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
K H F S D SHP ++IY KL+ L R+KE GYVP T + ++E+ K ++ H
Sbjct: 568 SNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRFLPCNLEDTAKQRILRYH 627
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SER+A+AF LI+ P +++ KNL+IC DCH A+KFISK+ R+I VRD +R+HHF G
Sbjct: 628 SERIAVAFALISMPATKPIIVKKNLRICADCHSALKFISKVENRDIIVRDNSRFHHFVKG 687
Query: 505 ICSCGDYW 512
CSCGDYW
Sbjct: 688 GCSCGDYW 695
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 164/363 (45%), Gaps = 38/363 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
LA L+ +YS C + +A +LFD +P+ NL W L+ N + A+ + + G
Sbjct: 55 LANHLITMYSHCADVPSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAG 114
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
LVP F A +A +AL+A G ++H +R ++ ++FV + L DMY+K +V A
Sbjct: 115 LVPTQFALSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEAC 174
Query: 129 QVFDKILERD----------------------------------PSEATLVTVISASADI 154
+VFD++ ++D + L +V+SAS +
Sbjct: 175 RVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGL 234
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCG-LVKVARNLFEQLREKRVVSWNAM 213
R +H + FE V V+ AL DMYAK + AR + VVS ++
Sbjct: 235 KDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSL 294
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I GY KAL +F +++ + V+P+ TF ++ C+ L ++G +++
Sbjct: 295 IDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSL 354
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I S T ++D+ G G + + L ++ D W A +N HGH + A A
Sbjct: 355 ISDSFVSST-LLDMYGKCGLISLSIQLFKEIEYHTDIA-WNAAINVLAQHGHGREAIRAF 412
Query: 333 EKL 335
+++
Sbjct: 413 DRM 415
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 127/299 (42%), Gaps = 48/299 (16%)
Query: 80 LKACSALSAIEEGRRIHED-VIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI---- 134
L++C + GR +H V+ F+ LI MY+ C+ V +A ++FD +
Sbjct: 24 LQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPN 83
Query: 135 ---------------LERD--------------PSEATLVTVISASADIAALPQGRELHG 165
+ RD P++ L + A+A +AA G +LH
Sbjct: 84 LVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHC 143
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
R F+ + V + L DMY+K GL+ A +F+Q+ +K V+W AMI GYA +G+
Sbjct: 144 VGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEA 203
Query: 226 ALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDE--GRMFFESMVRDYHIDPSVQHYT 281
A+ F M+ E V D VLSA GGL D R S V + V
Sbjct: 204 AVIAFRDMRREGLVGADQHVLCSVLSAS--GGLKDGWLARA-IHSCVMKSGFEQEVAVRN 260
Query: 282 CMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL--AELALEKLIEL 338
+ D+ + +D A + VK D G + + + G+++ E AL IEL
Sbjct: 261 ALTDMYAKAADMDNAARV-----VKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIEL 314
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 3/181 (1%)
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPD 240
L+ MY+ C V A LF+ + +VSW +++G + AL F M + + P
Sbjct: 59 LITMYSHCADVPSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPT 118
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
A + G VR D + + + D+ SG L EAC +
Sbjct: 119 QFALSSAARAAAALAARHAGAQLHCVGVR-LGFDAELFVASNLADMYSKSGLLVEACRVF 177
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
QM K D W A+++ +G+++ A +A + A +V+ S + A +
Sbjct: 178 DQMPQK-DAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKD 236
Query: 361 G 361
G
Sbjct: 237 G 237
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/548 (38%), Positives = 305/548 (55%), Gaps = 36/548 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF +A+ L +YS C L A ++FD++PQ++ W +I YA NG E A+
Sbjct: 151 LGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLS 210
Query: 61 YYRLLEIGLV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
+ + GLV D F L A L + IH V + +E +V V ALIDMYA
Sbjct: 211 FRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYA 270
Query: 120 KCSCVVNARQVF----------------DKILERD------------------PSEATLV 145
K V +A +V D +E D P+E T
Sbjct: 271 KSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFS 330
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
++I A A L QG +LH + + V + LVDMY KCGL+ ++ LF ++ +
Sbjct: 331 SMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYR 390
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
++WNA+I +A HGH +A+ F++M ++P+HI FV +L+ACS GL DEG +F
Sbjct: 391 TDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYF 450
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
SM + I+P +HY+C++D G +GRLDEA I +M +KP+ W +LL +C++ G
Sbjct: 451 YSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGS 510
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
+L E+A + L++LEP + G +V LS IYA WE V +RKLM D IKK SW++
Sbjct: 511 KELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVD 570
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
K H F S D SHP +IY KL+ L R+KE GY+P T + ++E+ K ++ H
Sbjct: 571 SNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYH 630
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SER+A+AF LI+ P +++ KNL+IC DCH A KFI K+ R+I VRD +R+HHF +G
Sbjct: 631 SERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNG 690
Query: 505 ICSCGDYW 512
CSCGDYW
Sbjct: 691 RCSCGDYW 698
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 168/364 (46%), Gaps = 38/364 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
LA L+ +YS C L +A +LF +P+RN W L+ + N + A+ + + G
Sbjct: 58 LANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAG 117
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P F A +A +AL A G ++H +R ++T++FV + L DMY+KC + A
Sbjct: 118 VAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEAC 177
Query: 129 QVFDKILERD----------------------------------PSEATLVTVISASADI 154
+VFD++ ++D + +V+SAS +
Sbjct: 178 RVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGL 237
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE-QLREKRVVSWNAM 213
+ +H + FEL V V+ AL+DMYAK V+ A + + VVS +M
Sbjct: 238 KDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSM 297
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I GY +AL ++ +++ + V+P+ TF ++ C+ L ++G +++
Sbjct: 298 IDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDL 357
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I S T +VD+ G G + + L ++ + D W A++N HGH + A A
Sbjct: 358 IRDSFVGST-LVDMYGKCGLISLSMQLFNEIEYRTDIA-WNAVINVFAQHGHGREAIQAF 415
Query: 333 EKLI 336
+++I
Sbjct: 416 DRMI 419
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 127/298 (42%), Gaps = 46/298 (15%)
Query: 80 LKACSALSAIEEGRRIHED-VIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD 138
L++C + GR +H V+ F+ LI MY+ C+ + +A ++F + R+
Sbjct: 27 LQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRN 86
Query: 139 P-SEATLVTVISAS---------------ADIAAL-----------------PQGRELHG 165
S TLV+ +S + A +A G +LH
Sbjct: 87 AVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQLHC 146
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
R F+ + V + L DMY+KCGL+ A +F+Q+ +K V+W AMI GYA +G
Sbjct: 147 VGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEA 206
Query: 226 ALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEG-RMFFESMVRDYHIDPSVQHYTC 282
A+ F MK E V D F VLSA GGL D V + V
Sbjct: 207 AVLSFRDMKREGLVGADQHVFCSVLSA--SGGLKDGWLSKSIHCCVTKAGFELEVAVRNA 264
Query: 283 MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL--AELALEKLIEL 338
++D+ S ++ A ++ K DPG W + + + G+++ E AL +EL
Sbjct: 265 LIDMYAKSMDVESASRVL-----KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVEL 317
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/503 (40%), Positives = 301/503 (59%), Gaps = 13/503 (2%)
Query: 14 VHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDN 73
+ +Y + + A ++ ++ +N +I Y G E A EL++ + + + N
Sbjct: 172 IQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWN 231
Query: 74 FTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDK 133
+ + IEE R + ++ E + +A+ID Y K A +VF+
Sbjct: 232 VM----VSGMAKCGMIEEARELFNEMK----EKNEISWSAMIDGYIKGGYYKEALEVFN- 282
Query: 134 ILERD---PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCG 190
+++R+ P + L +V++A A++ AL QGR +H + + + + TALVDMYAKCG
Sbjct: 283 VMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCG 342
Query: 191 LVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLS 249
+ +A ++FE++ +K V +WNAMI G MHG + A++LF KM K + +P+ IT +GVLS
Sbjct: 343 RLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLS 402
Query: 250 ACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
AC+ G+ DEG F SM Y I+P ++HY C+VDLLG +G L EA +++ M ++P
Sbjct: 403 ACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSA 462
Query: 310 GVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLM 369
VWGALL +C+ HG V+L E + L+ELEP ++G Y +LSNIYARA W+ VA +RKLM
Sbjct: 463 AVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLM 522
Query: 370 IDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVF 429
+RG+K S S I+ H F GD SHP IY LK + R+K G+ P T V
Sbjct: 523 KERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVL 582
Query: 430 HDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITERE 489
D+E +EK + HSE+LAIAFGLINT GT + + KNL++C+DCH A K IS++ +RE
Sbjct: 583 FDIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDRE 642
Query: 490 ITVRDVNRYHHFKDGICSCGDYW 512
I VRD RYHHFK G CSC D+W
Sbjct: 643 IIVRDRARYHHFKTGTCSCKDFW 665
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 162/320 (50%), Gaps = 12/320 (3%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L+ A ++F+ +P N+F++N++I+ N AI YY+++ P+ FT+P KA
Sbjct: 80 LNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKA 139
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEA 142
C+A A EEG ++H VI+ DV + +A I MY V AR++ + + +
Sbjct: 140 CTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGE--DGNSDVI 197
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
+I + +EL W + NV +V AKCG+++ AR LF ++
Sbjct: 198 CFNAMIDGYLKCGEVEAAKELF---WSME-DKNVGSWNVMVSGMAKCGMIEEARELFNEM 253
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGR 261
+EK +SW+AMI GY G+ +AL++F M ++E++P VL+AC+ G D+GR
Sbjct: 254 KEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGR 313
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
+ + V + T +VD+ GRLD A D+ +M K + W A++ +
Sbjct: 314 -WIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKME-KKEVFTWNAMICGLGM 371
Query: 322 HGHVKLAELALEKLIELEPH 341
HG AE A+E +++
Sbjct: 372 HGR---AEDAIELFFKMQKQ 388
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
F VL T LV +Y+ C L A +F+++ ++ +F WN +I +G E AIEL++++
Sbjct: 326 FDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKM 385
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRI 95
+ P+ T L AC+ ++EG RI
Sbjct: 386 QKQKFRPNGITLLGVLSACAHSGMVDEGLRI 416
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/526 (38%), Positives = 310/526 (58%), Gaps = 37/526 (7%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAW-NGPYEVAIELYYRLLEIGL-VPDNFTFPFAL 80
++ A +F +IP N+F WN LI+ Y+ + + I L+ +L E G VP++FT F L
Sbjct: 40 INYARSVFAQIPHPNIFSWNSLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVL 99
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD-- 138
KAC+ ++A EG ++H V+++ + + +FV +L++ Y KC + AR+VF+++ R+
Sbjct: 100 KACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLV 159
Query: 139 -------------------------------PSEATLVTVISASADIAALPQGRELHGFS 167
P TLV+V+SA A AL G LH +
Sbjct: 160 AWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGYWLHAYI 219
Query: 168 WRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKAL 227
++ ++++ TALVDMYAKCG ++ A+ +F + K +W++MI G+A HG + A+
Sbjct: 220 EKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAI 279
Query: 228 DLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDL 286
D F++M + EV PDH+TF+ VLSAC+ GGL GR F+ S++ ++ I+PSV+HY C VDL
Sbjct: 280 DAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRGRRFW-SLMLEFGIEPSVEHYGCKVDL 338
Query: 287 LGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNY 346
L SG ++EA + M++ P+ W +LL CK + L E+ L+ELEP +A NY
Sbjct: 339 LCRSGLVEEAYRITTTMKIPPNAATWRSLLMGCKKKKLLNLGEIVARYLLELEPLNAENY 398
Query: 347 VILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIY 406
+++SN+Y+ + WE +++LRK+M ++ IK CS IEV H F+ GD SHP +
Sbjct: 399 IMISNLYSSLSQWEKMSELRKVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLR 458
Query: 407 AKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLIT 466
++ + R++++GY P V H V ++EK + HSER AIA+GL+ T + +
Sbjct: 459 EFMEEMSMRVRDSGYRPSISDVLHKVVDEEKECALSEHSERFAIAYGLLKTRAPIVIRVV 518
Query: 467 KNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
KNL++C DCH IK ISK+ EREI VRD R+H F G CSC D+W
Sbjct: 519 KNLRVCVDCHEVIKIISKLYEREIIVRDRVRFHKFIKGTCSCKDFW 564
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 34/249 (13%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + T LV+ Y C+ + A ++F+ +P RNL W +I +A G + A+EL+
Sbjct: 122 GFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMELF 181
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + G+ PD T + AC+ A++ G +H + + TD+ + AL+DMYAKC
Sbjct: 182 REMQKAGIQPDAMTLVSVVSACAVAGALDIGYWLHAYIEKYFVLTDLELSTALVDMYAKC 241
Query: 122 SCVVNARQV-------------------------------FDKILERD--PSEATLVTVI 148
C+ A+QV F ++LE + P T + V+
Sbjct: 242 GCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVL 301
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-EKRV 207
SA A + +GR E +V+ VD+ + GLV+ A + ++
Sbjct: 302 SACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPNA 361
Query: 208 VSWNAMITG 216
+W +++ G
Sbjct: 362 ATWRSLLMG 370
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 14/187 (7%)
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAKCGL-----VKVARNLFEQLREKRVVSWNAMIT 215
R+LH L+ AL + A C L + AR++F Q+ + SWN++I
Sbjct: 5 RQLHAHILTRPLPLS-SFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNSLIK 63
Query: 216 GYA-MHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
GY+ +H S + + LF+K+ + P+ T VL AC+ F EG +++D
Sbjct: 64 GYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLKD-G 122
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
S+ T +V+ G + A + +M V+ + W A+++ H V + A+
Sbjct: 123 FGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVR-NLVAWTAMISG---HARVGAVDEAM 178
Query: 333 EKLIELE 339
E E++
Sbjct: 179 ELFREMQ 185
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/519 (38%), Positives = 307/519 (59%), Gaps = 12/519 (2%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + LV +Y+ C + +AH++FDR+ R++ W +I Y A+ L+
Sbjct: 162 GFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLF 221
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHED---VIRNKWETDVFVGAALIDMY 118
++ E G + D T A+ SA+ + +GR V E + +++ Y
Sbjct: 222 RKMQEEGFLGDEIT---AISVASAVGQLGDGRMAISRARLVFDRMEERNGISWNSMLSGY 278
Query: 119 AKCSCVVNARQVFDKIL--ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
+ +A +F+++ E DP+ T + ++SA + + + GR+LH F + +++
Sbjct: 279 TQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDT 338
Query: 177 KVKTALVDMYAKCGLVKVARNLFE--QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
++ A++DMY KCG + A +F +L E+ V SWN +I+GY +HGH +AL+LF +M+
Sbjct: 339 TLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQ 398
Query: 235 DE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
E V+P+ ITF +LSACS GL DEGR F M + + P ++HY CMVD+LG +G L
Sbjct: 399 VEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTK-LSVRPEMKHYACMVDMLGRAGFL 457
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIY 353
+EA LI ++ +P VWGALL +C++HG+ +L E+A L +LEP G YV++SNIY
Sbjct: 458 NEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIY 517
Query: 354 ARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLE 413
A + W+ V +R+ M RG+KK A S IE + H F + D S P E+Y K++ L
Sbjct: 518 AASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLA 577
Query: 414 GRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICD 473
MK GYVP V HDVE ++K +++ HSE+LA+AFG++ G + +TKNL++C
Sbjct: 578 IEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCS 637
Query: 474 DCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
DCH A KFIS I R+I VRD NR+HHF+ G CSCGDYW
Sbjct: 638 DCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 676
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/364 (32%), Positives = 185/364 (50%), Gaps = 16/364 (4%)
Query: 2 GFGFH-PVLATKLVHLYSACDCLHNAHQLFDR--------IPQRNLFLWNVLIRAYAWNG 52
GF H P +L+ LYS LH+A LFD N FL N ++RAYA G
Sbjct: 52 GFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAG 111
Query: 53 PYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGA 112
AI+LY + +G+ +NFT+PF LK C++ G +H V+R + +D+FV A
Sbjct: 112 RSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEA 171
Query: 113 ALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASAD--IAALPQGRELHGFSWRH 170
AL+DMYAKC + +A +VFD++L RD T + + A+ + AL R++ +
Sbjct: 172 ALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLG 231
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
+ V +A+ + + AR +F+++ E+ +SWN+M++GY +G T AL LF
Sbjct: 232 DEITAISVASAVGQLGDGRMAISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLF 291
Query: 231 EKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGH 289
+M+ E P+ +T + ++SACS G GR + V +D ++D+
Sbjct: 292 NQMQASECDPNPVTALIMVSACSYLGSKHLGRK-LHNFVISSKMDIDTTLRNAIMDMYMK 350
Query: 290 SGRLDEACDLIMQMRV-KPDPGVWGALLNSCKLHGHVKLA-ELALEKLIE-LEPHDAGNY 346
G LD A ++ + + D W L++ +HGH K A EL +E +EP+D
Sbjct: 351 CGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFT 410
Query: 347 VILS 350
ILS
Sbjct: 411 SILS 414
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/581 (36%), Positives = 314/581 (54%), Gaps = 72/581 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G H + L++ Y C + +A QLFD +P+R+ W L+ A + A+ +
Sbjct: 33 GLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNLSNRPHRALSIS 92
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSA--IEEGRRIH----------EDVIRNK------ 103
LL G PD+F F +KAC+ L +++G+++H +DV+++
Sbjct: 93 RSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYA 152
Query: 104 ----------------------WET------------------------DVFVGAALIDM 117
W T ++F ALI
Sbjct: 153 KFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISG 212
Query: 118 YAKCSCVVNARQVF-----DKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
+ V+A +F + I DP L +V+ A A++A G+++HG +
Sbjct: 213 LVQSGNGVDAFHLFVEMRHEGISVTDP--LVLSSVVGACANLALWELGKQMHGVVITLGY 270
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
E + + AL+DMYAKC + A+ +F ++ K VVSW ++I G A HG + +AL L+++
Sbjct: 271 ESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDE 330
Query: 233 MK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
M V+P+ +TFVG++ ACS GL +GR F +MV D+ I PS+QHYTC++DL SG
Sbjct: 331 MVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSG 390
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSN 351
LDEA +LI M V PD W ALL+SCK HG+ ++A + L+ L+P D +Y++LSN
Sbjct: 391 HLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPEDPSSYILLSN 450
Query: 352 IYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKW 411
IYA A WE V+K+RKLM+ KK+ S I++ +H F +G+ SHP DEI ++
Sbjct: 451 IYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAGETSHPMRDEIIGLMRE 510
Query: 412 LEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKI 471
L+ M++ GY P T SV HD++ EK + HSERLA+A+GL+ GT + I KNL++
Sbjct: 511 LDEEMRKRGYAPDTSSVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGTVIRIVKNLRV 570
Query: 472 CDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
C DCH +K IS IT REI VRD RYHHFKDG CSC D+W
Sbjct: 571 CGDCHTVLKLISAITNREIYVRDAKRYHHFKDGNCSCNDFW 611
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 102/264 (38%), Gaps = 50/264 (18%)
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
++LH + + + L++ Y KCGL++ A LF+ L + V+W +++T +
Sbjct: 22 AKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNL 81
Query: 220 HGHSTKALDLFEK-MKDEVQPDHITFVGVLSAC--------------------------- 251
+AL + + PDH F ++ AC
Sbjct: 82 SNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDD 141
Query: 252 ----------SRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
++ GL D GR F+S+ I +T M+ SGR EA L
Sbjct: 142 VVKSSLIDMYAKFGLPDYGRAVFDSISSLNSIS-----WTTMISGYARSGRKFEAFRLFR 196
Query: 302 QMRVKPDPGVWGALLNSCKLHGH-VKLAELALEKLIELEPHDAGNYVILSNIYARAAN-- 358
Q + + W AL++ G+ V L +E + E + ++LS++ AN
Sbjct: 197 QTPYR-NLFAWTALISGLVQSGNGVDAFHLFVE--MRHEGISVTDPLVLSSVVGACANLA 253
Query: 359 -WEGVAKLRKLMIDRGIKKSIACS 381
WE ++ ++I G + + S
Sbjct: 254 LWELGKQMHGVVITLGYESCLFIS 277
>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/545 (37%), Positives = 314/545 (57%), Gaps = 37/545 (6%)
Query: 4 GFHPVL--ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF P L +++ ++ C + +A +LFD +P++++ W +I + +G + A L+
Sbjct: 147 GFEPDLYVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLF 206
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ E + TF ++A + L ++ GR+IH ++ D FV ALIDMY+KC
Sbjct: 207 LCMWEEFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKC 266
Query: 122 SCVVNARQVFDKILERD----------------PSEA-----------------TLVTVI 148
+ +A VFD++ E+ EA T+ VI
Sbjct: 267 GSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVI 326
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A +A+L ++ H R ++ ++ TALVD Y+K G ++ A ++F ++R K V+
Sbjct: 327 RICARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVI 386
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNA+I GY HG +A+++FE+M ++ + P+H+TF+ VLSACS GL + G F SM
Sbjct: 387 SWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSM 446
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
RD+ + P HY CMV+LLG G LDEA +LI KP +W LL +C++H +++L
Sbjct: 447 SRDHKVKPRAMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLEL 506
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
+LA E L +EP NY++L N+Y + + A + + + +G++ AC+WIEVK
Sbjct: 507 GKLAAENLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTWIEVKK 566
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+++AFL GD SH EIY K+ + + GYV +++ DV+ +E+ ++ HSE+
Sbjct: 567 QSYAFLCGDKSHSQTKEIYEKVNNMMVEISRHGYVEENKALLPDVDEEEQ-RILKYHSEK 625
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGLINTP T L IT+ ++C DCH AIKFI+ +T REI VRD +R+HHF+DG CS
Sbjct: 626 LAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKFIAMVTGREIVVRDASRFHHFRDGSCS 685
Query: 508 CGDYW 512
CGDYW
Sbjct: 686 CGDYW 690
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 159/320 (49%), Gaps = 40/320 (12%)
Query: 54 YEVAIELYYRLLEI---GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFV 110
Y A+EL+ +LE+ G T+ + AC L +I +R+ ++ + +E D++V
Sbjct: 96 YREAMELF-EILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYV 154
Query: 111 GAALIDMYAKCSCVVNARQVFDKILERDP----------------SEA------------ 142
++ ++ KC +++AR++FD++ E+D SEA
Sbjct: 155 MNRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFN 214
Query: 143 -----TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
T T+I ASA + + GR++H + + + V AL+DMY+KCG ++ A
Sbjct: 215 DGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHC 274
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGL 256
+F+Q+ EK V WN++I YA+HG+S +AL + +M+D + DH T V+ C+R
Sbjct: 275 VFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLAS 334
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
+ + ++VR + D + T +VD GR+++A + +MR K + W AL+
Sbjct: 335 LEYAKQAHAALVRRGY-DTDIVANTALVDFYSKWGRMEDAWHVFNRMRRK-NVISWNALI 392
Query: 317 NSCKLHGHVKLAELALEKLI 336
HG + A E+++
Sbjct: 393 AGYGNHGQGEEAVEMFEQML 412
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 16/249 (6%)
Query: 138 DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
D +T ++SA + ++ + + + FE ++ V ++ ++ KCGL+ AR
Sbjct: 114 DVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARK 173
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHI-TFVGVLSACSRGGL 256
LF+++ EK + SW MI G+ G+ ++A LF M +E TF ++ A + GL
Sbjct: 174 LFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGL 233
Query: 257 FDEGRMFFE-SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
GR ++ R D V ++D+ G +++A + QM K G W ++
Sbjct: 234 VQVGRQIHSCALKRGVGDDTFVS--CALIDMYSKCGSIEDAHCVFDQMPEKTTVG-WNSI 290
Query: 316 LNSCKLHGHVKLAELALEKLIELEPHDAGNYV------ILSNIYARAANWEGVAKLRKLM 369
+ S LHG+ +E AL E+ D+G + I+ I AR A+ E + +
Sbjct: 291 IASYALHGY---SEEALSFYYEM--RDSGAKIDHFTISIVIRICARLASLEYAKQAHAAL 345
Query: 370 IDRGIKKSI 378
+ RG I
Sbjct: 346 VRRGYDTDI 354
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/576 (35%), Positives = 322/576 (55%), Gaps = 65/576 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + +H++S C + A ++FD + WN+++ Y ++ + L+
Sbjct: 137 GFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLF 196
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + G+ P++ T L ACS L +E G+ I++ + E ++ + LIDM+A C
Sbjct: 197 IEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAAC 256
Query: 122 ---------------------SCVVN----------ARQVFDKILERD------------ 138
+ +V AR+ FD+I ERD
Sbjct: 257 GEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYL 316
Query: 139 ---------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
P E T+V++++A A + AL G + + ++ + +
Sbjct: 317 RMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTF 376
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDE 236
V AL+DMY KCG V A+ +F+++ K +W AMI G A++GH +AL +F M +
Sbjct: 377 VGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEAS 436
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+ PD IT++GVL AC+ G+ ++G+ FF SM + I P+V HY CMVDLLG +GRL+EA
Sbjct: 437 ITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEA 496
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARA 356
++I+ M VKP+ VWG+LL +C++H +V+LAE+A ++++ELEP + YV+L NIYA
Sbjct: 497 HEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAAC 556
Query: 357 ANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRM 416
WE + ++RKLM++RGIKK+ CS +E+ + F++GD SHP EIYAKL+ + +
Sbjct: 557 KRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDL 616
Query: 417 KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCH 476
+AGY P T VF D+ ++K + HSE+LAIA+ LI++ G + I KNL++C DCH
Sbjct: 617 IKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRIVKNLRMCVDCH 676
Query: 477 IAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
K +S+ RE+ VRD R+HHF+ G CSC ++W
Sbjct: 677 HMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 184/412 (44%), Gaps = 85/412 (20%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHN------AHQLFDRIPQRNLFLWNVLIRAYAWNGPY 54
MG P+ +++ A C H A Q+FD IPQ LF+WN +I+ Y+
Sbjct: 33 MGLSSDPLFQKRVI----AFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHP 88
Query: 55 EVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAAL 114
+ + +Y +L + PD FTFPF LK + A++ G+ + +++ +++++FV A
Sbjct: 89 QNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAF 148
Query: 115 IDMYAKCSCVVNARQVFD--------------------------KIL----ER---DPSE 141
I M++ C V AR+VFD K+L E+ P+
Sbjct: 149 IHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNS 208
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC------------ 189
TLV ++SA + + L G+ ++ + E N+ ++ L+DM+A C
Sbjct: 209 VTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDN 268
Query: 190 -------------------GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
G + +AR F+Q+ E+ VSW AMI GY +AL LF
Sbjct: 269 MKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALF 328
Query: 231 EKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYT----CMVD 285
+M+ V+PD T V +L+AC+ G + G V+ Y S+++ T ++D
Sbjct: 329 REMQMSNVKPDEFTMVSILTACAHLGALELGE-----WVKTYIDKNSIKNDTFVGNALID 383
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+ G + +A + +M K D W A++ ++GH + A +IE
Sbjct: 384 MYFKCGNVGKAKKVFKEMHHK-DKFTWTAMIVGLAINGHGEEALAMFSNMIE 434
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 148/318 (46%), Gaps = 13/318 (4%)
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIH-EDVIRNKWETDVFVGAALIDM 117
+++ +++GL D F + + A E G+ I+ V + +F+ +I
Sbjct: 25 QIHSHTIKMGLSSDPL---FQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKG 81
Query: 118 YAKCSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELN 175
Y++ + N ++ +L + P T ++ AL G+ L + +H F+ N
Sbjct: 82 YSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSN 141
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-K 234
+ V+ A + M++ C LV +AR +F+ VV+WN M++GY K+ LF +M K
Sbjct: 142 LFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEK 201
Query: 235 DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLD 294
V P+ +T V +LSACS+ + G+ ++ + ++ ++ ++D+ G +D
Sbjct: 202 RGVSPNSVTLVLMLSACSKLKDLEGGKHIYK-YINGGIVERNLILENVLIDMFAACGEMD 260
Query: 295 EACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYA 354
EA + M+ + D W +++ G + LA +++ E D ++ + + Y
Sbjct: 261 EAQSVFDNMKNR-DVISWTSIVTGFANIGQIDLARKYFDQIPE---RDYVSWTAMIDGYL 316
Query: 355 RAANW-EGVAKLRKLMID 371
R + E +A R++ +
Sbjct: 317 RMNRFIEALALFREMQMS 334
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/533 (39%), Positives = 303/533 (56%), Gaps = 29/533 (5%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL--- 64
V T ++ Y + A LFD +P+RN+ W +I YA NG +A +L+ +
Sbjct: 175 VARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDR 234
Query: 65 ------------LEIGLVPD-----NFTFPFALKACSALSAIEEGRRIHEDVIRNKWET- 106
++ G V D N + AC+A+ + G+ D + +E
Sbjct: 235 NEVSWTAMLVGYIQAGHVEDAEDLFNAMPDHPVAACNAM-MVGFGQHGMVDAAKAMFERM 293
Query: 107 ---DVFVGAALIDMYAKCSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGR 161
D +A+I +Y + ++ A F ++L R P+ + +++++ A +A GR
Sbjct: 294 CARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGR 353
Query: 162 ELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHG 221
ELH R F+ +V +AL+ MY KCG + A+ +F K VV WN+MITGYA HG
Sbjct: 354 ELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHG 413
Query: 222 HSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHY 280
+AL +F+ ++ + PD IT++GVL+ACS G EGR F SM + I HY
Sbjct: 414 LGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHY 473
Query: 281 TCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEP 340
+CMVDLLG +G +DEA DLI M V+PD +WGAL+ +C++H + ++AE+A +KL+ELEP
Sbjct: 474 SCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEP 533
Query: 341 HDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDA-SH 399
AG YV+LS+IY WE + +RK + R + KS CSWIE H F SGD SH
Sbjct: 534 GSAGPYVLLSHIYTSTGRWEDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSH 593
Query: 400 PNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPD 459
P I L+ L+G + E+GY V HDV+ ++KA + HSER A+A+GL+ P
Sbjct: 594 PEHAIILNMLEELDGLLMESGYSADGSFVLHDVDEEQKAQSLRYHSERQAVAYGLLKVPA 653
Query: 460 GTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
G + + KNL++C DCH AIK I+KIT REI +RD NR+HHFKDG+CSC DYW
Sbjct: 654 GMPIRVMKNLRVCGDCHSAIKLITKITSREIILRDANRFHHFKDGLCSCRDYW 706
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 132/304 (43%), Gaps = 41/304 (13%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL----------LEIGLVPD 72
+ A FD +P R +N LI Y N + A+ L++R+ L GL
Sbjct: 33 IEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPSRDLGSYNALIAGLSLR 92
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
T P A +AL++I V +L+ Y + + +A ++F
Sbjct: 93 RHTLP---DAAAALASI-------------PLPPSVVSFTSLLRGYVRHGLLADAIRLFH 136
Query: 133 KILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLV 192
++ ER+ T ++ D + + R+L + + +V +TA++ Y + G +
Sbjct: 137 QMPERN--HVTYTVLLGGFLDAGRVNEARKL----FDEMPDKDVVARTAMLSGYCQAGRI 190
Query: 193 KVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACS 252
AR LF+++ ++ VVSW AMI+GYA +G A LFE M D + +++ +L
Sbjct: 191 TEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDR---NEVSWTAMLVGYI 247
Query: 253 RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
+ G ++ F +M D V M+ G G +D A + +M + D G W
Sbjct: 248 QAGHVEDAEDLFNAMP-----DHPVAACNAMMVGFGQHGMVDAAKAMFERMCAR-DDGTW 301
Query: 313 GALL 316
A++
Sbjct: 302 SAMI 305
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 140/314 (44%), Gaps = 17/314 (5%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y L +A +LF ++P+RN + VL+ + G A +L+ + + +V
Sbjct: 116 TSLLRGYVRHGLLADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVV 175
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
+A I E R + +++ + +V A+I YA+ V+ AR++
Sbjct: 176 ARTAMLSGYCQA----GRITEARALFDEMPKR----NVVSWTAMISGYAQNGKVILARKL 227
Query: 131 FDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCG 190
F+ + +R+ E + ++ + +L H V A++ + + G
Sbjct: 228 FEVMPDRN--EVSWTAMLVGYIQAGHVEDAEDLFNAMPDH----PVAACNAMMVGFGQHG 281
Query: 191 LVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLS 249
+V A+ +FE++ + +W+AMI Y + +AL F +M ++P++ +F+ +L+
Sbjct: 282 MVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILT 341
Query: 250 ACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
C+ D GR +M+R D V + ++ + G LD+A + M D
Sbjct: 342 VCAALATADYGRELHAAMLR-CSFDTDVFAVSALITMYIKCGNLDKA-KRVFNMFEPKDV 399
Query: 310 GVWGALLNSCKLHG 323
+W +++ HG
Sbjct: 400 VMWNSMITGYAQHG 413
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/577 (36%), Positives = 314/577 (54%), Gaps = 67/577 (11%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
FG ++ L+H YS+ L +A+ +F +I ++++ WN +I + G E A++L+
Sbjct: 162 FGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFK 221
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
R+ P+ T L AC+ +E GR + + RN + ++ + A++DMY KC
Sbjct: 222 RMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCG 281
Query: 123 CVVNA-------------------------------RQVFDKILERD------------- 138
+ +A R+VFD + D
Sbjct: 282 SLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQ 341
Query: 139 ---------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
P+E TL + ++A A + A+ G +H + + +LN
Sbjct: 342 NGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFH 401
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-E 236
+ T+L+DMY+KCG ++ A +F + + V W+AMI G AMHGH A+DLF KM++ +
Sbjct: 402 ITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETK 461
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
V+P+ +TF +L ACS GL DEGR+FF M Y + P +HY CMVD+LG +G L+EA
Sbjct: 462 VKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEA 521
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARA 356
+LI +M + P VWGALL +C+++G+V+LAE+A +L+E + ++ G YV+LSNIYA+A
Sbjct: 522 VELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKA 581
Query: 357 ANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRM 416
W+ V++LR+ M G++K CS IEV H FL GD SHP EIY+KL + R+
Sbjct: 582 GKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVARI 641
Query: 417 KEAGYVPGTESVFHDVEND-EKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDC 475
K GYV + VE + K + + HSE+LAIA+GLI + I KNL++C DC
Sbjct: 642 KSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRMEPSQPIRIVKNLRVCGDC 701
Query: 476 HIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
H K ISK+ R+I +RD R+HHF G CSC DYW
Sbjct: 702 HSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 197/423 (46%), Gaps = 79/423 (18%)
Query: 2 GFGFHPVLATKLVHLYSAC-----DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWN-GPYE 55
G F P ATKL ++AC L A ++FD+IP+ NL+ WN LIRA+A + P +
Sbjct: 57 GLFFDPPSATKL---FTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQ 113
Query: 56 VAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALI 115
+ L E P+++TFPF +KA + +S++ G+ IH V++ + +D+F+ +LI
Sbjct: 114 GLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLI 173
Query: 116 DMYAKCSCVVNARQVFDKILERD---------------------------------PSEA 142
Y+ + +A VF KI+E+D P+
Sbjct: 174 HFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRV 233
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T+V V+SA A L GR + R+ ++N+ + A++DMY KCG ++ AR LF+++
Sbjct: 234 TMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKM 293
Query: 203 REKRVVSWNAMITGYA-------------------------------MHGHSTKALDLFE 231
EK +VSW MI GYA +G +AL +F
Sbjct: 294 EEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFR 353
Query: 232 KMK--DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGH 289
+++ +P+ +T L+AC++ G D G + ++ I + T ++D+
Sbjct: 354 ELQLNKNTKPNEVTLASTLAACAQLGAMDLGG-WIHVYIKKQGIKLNFHITTSLIDMYSK 412
Query: 290 SGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVIL 349
G L++A ++ + + D VW A++ +HGH + A K+ E + N V
Sbjct: 413 CGHLEKALEVFYSVE-RRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKP--NAVTF 469
Query: 350 SNI 352
+N+
Sbjct: 470 TNL 472
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 167/327 (51%), Gaps = 22/327 (6%)
Query: 59 ELYYRLLEIGLV--PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
+L+ +L GL P + T F A S+ S+++ ++ + + R +++ LI
Sbjct: 48 QLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPR----PNLYTWNTLIR 103
Query: 117 MYAKCSCVVNARQVFDKIL---ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFE 173
+A + VF ++L +R P+ T VI A+ ++++L G+ +HG + F
Sbjct: 104 AFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFG 163
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
++ + +L+ Y+ G + A +F ++ EK +VSWN+MI+G+ G +AL LF++M
Sbjct: 164 SDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRM 223
Query: 234 KDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGR 292
K E +P+ +T VGVLSAC++ + GR + + R+ ID ++ M+D+ G
Sbjct: 224 KMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERN-GIDINLILSNAMLDMYVKCGS 282
Query: 293 LDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL-ALEKLIELEPHD---AGNYVI 348
L++A L +M K D W +++ G+ K+ + A ++ ++ P + A N +I
Sbjct: 283 LEDARRLFDKMEEK-DIVSWTTMID-----GYAKVGDYDAARRVFDVMPREDITAWNALI 336
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIK 375
S+ E +A R+L +++ K
Sbjct: 337 -SSYQQNGKPKEALAIFRELQLNKNTK 362
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/581 (35%), Positives = 318/581 (54%), Gaps = 81/581 (13%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY----------- 61
LV +Y+ + A+ +F +P +++ WN ++ Y+ G +E A+ L+
Sbjct: 270 LVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMD 329
Query: 62 ------------------------YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIH- 96
++L G+ P+ T L C+++ A+ G+ IH
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Query: 97 ------EDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL--ERD---------- 138
D+ +N + V LIDMYAKC V AR +FD + ERD
Sbjct: 390 YAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGG 449
Query: 139 -------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFE 173
P+ T+ + A A +AAL G+++H ++ R++
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQN 509
Query: 174 -LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
+ + V L+DMYAKCG + AR +F+ + EK V+W +++TGY MHG+ +AL +FE+
Sbjct: 510 AVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEE 569
Query: 233 MKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
M+ + D +T + VL ACS G+ D+G +F M D+ + P +HY C+VDLLG +G
Sbjct: 570 MRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAG 629
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSN 351
RL+ A LI +M ++P P VW ALL+ C++HG V+L E A +K+ EL ++ G+Y +LSN
Sbjct: 630 RLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSN 689
Query: 352 IYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKW 411
+YA A W+ V ++R LM +GIKK CSW+E F GD +HP+ EIY L
Sbjct: 690 MYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLSD 749
Query: 412 LEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKI 471
R+K+ GYVP T HDV+++EK +++ HSE+LA+A+G++ TP G + ITKNL++
Sbjct: 750 HMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRV 809
Query: 472 CDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
C DCH A ++S+I + EI +RD +R+HHFK+G+CSC YW
Sbjct: 810 CGDCHTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCKGYW 850
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 140/285 (49%), Gaps = 37/285 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRN--LFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
L + L+ Y + CL +A L R P + ++ WN LIR+Y NG + + +
Sbjct: 61 LTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHS 120
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
+ PDN+TFPF KAC +S++ G H + ++VFVG AL+ MY++C + +
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSD 180
Query: 127 ARQVFDKILERD----------------------------------PSEATLVTVISASA 152
AR+VFD++ D P + TLV V+ A
Sbjct: 181 ARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCA 240
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+ G++ HGF+ N+ V LVDMYAK G++ A +F + K VVSWNA
Sbjct: 241 SVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNA 300
Query: 213 MITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGL 256
M+ GY+ G A+ LFE+M++E ++ D +T+ +S ++ GL
Sbjct: 301 MVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGL 345
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 165/355 (46%), Gaps = 55/355 (15%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + LV +YS C L +A ++FD +P ++ WN +I +YA G ++A+E++
Sbjct: 157 GFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMF 216
Query: 62 YRLL-EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
++ E G PD+ T L C+++ G++ H + ++ ++FVG L+DMYAK
Sbjct: 217 SKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
+ A VF + +D V+S +A +A G+S RFE V+
Sbjct: 277 FGMMDEANTVFSNMPVKD--------VVSWNAMVA---------GYSQIGRFEDAVR--- 316
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKR----VVSWNAMITGYAMHGHSTKALDLFEKM-KD 235
LFEQ++E++ VV+W+A I+GYA G +AL + +M
Sbjct: 317 -----------------LFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS 359
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGR-------MFFESMVRDYHIDPSVQHYTCMVDLLG 288
++P+ +T + VLS C+ G G+ + + ++ H D ++ ++D+
Sbjct: 360 GIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMV-INQLIDMYA 418
Query: 289 HSGRLDEACDLIMQMRVKP-DPGVWGALLNSCKLHGHVKLAELALEKLIELEPHD 342
++D A + + K D W ++ HG A ALE L E+ D
Sbjct: 419 KCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGD---ANKALELLSEMFEED 470
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 148/325 (45%), Gaps = 25/325 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEVAIE 59
G G ++ +L+ +Y+ C + A +FD + +R++ W V+I Y+ +G A+E
Sbjct: 402 GHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALE 461
Query: 60 LYYRLLE--IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWE-TDVFVGAALID 116
L + E P+ FT AL AC++L+A+ G++IH +RN+ +FV LID
Sbjct: 462 LLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLID 521
Query: 117 MYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHG-FSWRHRFELN 175
MYAKC + +AR VFD ++E++ VT S G E G F R
Sbjct: 522 MYAKCGDIGDARLVFDNMMEKNE-----VTWTSLMTGYGMHGYGEEALGIFEEMRRIGFK 576
Query: 176 VKVKTALVDMYA--KCGLVKVARNLFEQLREKRVVS-----WNAMITGYAMHGHSTKALD 228
+ T LV +YA G++ F +++ VS + ++ G AL
Sbjct: 577 LDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALR 636
Query: 229 LFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
L E+M ++P + +V +LS C G + G + + + YT + ++
Sbjct: 637 LIEEMP--MEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDG--SYTLLSNMYA 692
Query: 289 HSGRLDEACDLIMQMR---VKPDPG 310
++GR + + MR +K PG
Sbjct: 693 NAGRWKDVTRIRSLMRHKGIKKRPG 717
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 117/248 (47%), Gaps = 13/248 (5%)
Query: 135 LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV 194
L P T V A +I+++ G H S F NV V ALV MY++CG +
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSD 180
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACS 252
AR +F+++ VVSWN++I YA G AL++F KM +E +PD IT V VL C+
Sbjct: 181 ARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCA 240
Query: 253 RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
G G+ F V I ++ C+VD+ G +DEA + M VK D W
Sbjct: 241 SVGTRSLGKQFHGFAVTSEMIQ-NMFVGNCLVDMYAKFGMMDEANTVFSNMPVK-DVVSW 298
Query: 313 GALLNSCKLHGH----VKLAELALEKLIELEPHDAGNYVILSNIYA-RAANWEGVAKLRK 367
A++ G V+L E E+ I++ D + + YA R +E + R+
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEQMQEEKIKM---DVVTWSAAISGYAQRGLGYEALGVCRQ 355
Query: 368 LMIDRGIK 375
M+ GIK
Sbjct: 356 -MLSSGIK 362
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/554 (38%), Positives = 317/554 (57%), Gaps = 43/554 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQ---RNLFLWNVLIRAYAWNGPYEVAI 58
G+ + + ++ YS L+ A ++F + + R+ WN +I A + A+
Sbjct: 169 GYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAV 228
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
EL+ ++ GL D FT L A + + + G + H +I++ + + VG+ LID+Y
Sbjct: 229 ELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLY 288
Query: 119 AKCSC-VVNARQVFDKILERD----------------------------------PSEAT 143
+KC+ +V R+VF++I D P + +
Sbjct: 289 SKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCS 348
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELN-VKVKTALVDMYAKCGLVKVARNLFEQL 202
V V SA +++++ G+++H + + N V V ALV MY+KCG V AR +F+ +
Sbjct: 349 FVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTM 408
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGR 261
E +VS N+MI GYA HG ++L LFE M + ++ P+ ITF+ VLSAC G +EG+
Sbjct: 409 PEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQ 468
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
+F M + I+P +HY+CM+DLLG +G+L EA +I M P W LL +C+
Sbjct: 469 KYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRK 528
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
HG+V+LA A + ++LEP++A YV+LSN+YA AA WE A +++LM +RG+KK CS
Sbjct: 529 HGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCS 588
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVF---HDVENDEKA 438
WIE+ K H F++ D SHP EI+ + + +MK+AGYVP +VE DEK
Sbjct: 589 WIEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKE 648
Query: 439 NMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRY 498
+ HSE+LA+AFGLI+T + +L+ KNL+IC DCH AIK IS IT REITVRD +R+
Sbjct: 649 RRLLYHSEKLAVAFGLISTEEWVPILVVKNLRICGDCHNAIKLISAITGREITVRDTHRF 708
Query: 499 HHFKDGICSCGDYW 512
H FK+G CSCGDYW
Sbjct: 709 HCFKEGHCSCGDYW 722
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 125/318 (39%), Gaps = 54/318 (16%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L+ LYS C LHNA FD N+F +N LI AYA + +A +++ + +
Sbjct: 46 LSNHFTLLYSKCGSLHNAQTSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQ-- 103
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
PD ++ + A + R+ +V ++ D F
Sbjct: 104 --PDIVSYNTLIAAYADRGECRPALRLFAEVRELRFGLDGF------------------- 142
Query: 129 QVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
TL VI A D L R+LH F ++ V A++ Y++
Sbjct: 143 --------------TLSGVIIACGDDVGLV--RQLHCFVVVCGYDCYASVNNAVLACYSR 186
Query: 189 CGLVKVARNLFEQLRE---KRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITF 244
G + AR +F ++ E + VSWNAMI H +A++LF +M + ++ D T
Sbjct: 187 KGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTM 246
Query: 245 VGVLSA--CSR---GGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
VL+A C + GG+ G M + H+ ++DL C
Sbjct: 247 ASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSG------LIDLYSKCAGGMVECRK 300
Query: 300 IMQMRVKPDPGVWGALLN 317
+ + PD +W +++
Sbjct: 301 VFEEIAAPDLVLWNTMIS 318
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 100/258 (38%), Gaps = 57/258 (22%)
Query: 75 TFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI 134
TF LKAC A + G+ +H ++ ++ +Y+KC + NA+ FD
Sbjct: 11 TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFD-- 68
Query: 135 LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV 194
L + P NV L++ YAK L+ +
Sbjct: 69 LTQYP-----------------------------------NVFSYNTLINAYAKHSLIHL 93
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSR 253
AR +F+++ + +VS+N +I YA G AL LF ++++ D T GV+ AC
Sbjct: 94 ARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFGLDGFTLSGVIIACGD 153
Query: 254 GGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDL-------LGHSGRLDEACDLIMQMRVK 306
D G +VR H V Y C + G L+EA + +M
Sbjct: 154 ----DVG------LVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEG 203
Query: 307 P--DPGVWGALLNSCKLH 322
D W A++ +C H
Sbjct: 204 GGRDEVSWNAMIVACGQH 221
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/503 (40%), Positives = 297/503 (59%), Gaps = 11/503 (2%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
++ +S + A +LF +P RN WN +I Y +G ++A +L+ E+ V
Sbjct: 105 MISGFSQNGMMDQARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLF----EVAPVRS 160
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+ + IE + E++ ++ A+I Y + N ++F
Sbjct: 161 VVAWTAMITGFMKFGKIELAEKYFEEMPMK----NLVTWNAMIAGYIENCQAENGLKLFK 216
Query: 133 KILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCG 190
+++E P+ ++L +V+ ++++AL G+++H + N+ T+L+ MY KCG
Sbjct: 217 RMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCG 276
Query: 191 LVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLS 249
++ A LF + +K VV+WNAMI+GYA HG KAL LF+KM+DE ++PD ITFV VLS
Sbjct: 277 DLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLS 336
Query: 250 ACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
AC+ G D G +F SMVRDY ++ HYTC+VDLLG G+L EA DLI +M KP
Sbjct: 337 ACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHS 396
Query: 310 GVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLM 369
++G LL +C++H +++LAE A + L+ L+P A YV L+N+YA W+ VA +R+ M
Sbjct: 397 AIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSM 456
Query: 370 IDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVF 429
D + K+ SWIEVK+ H F SGD HP I+ KL LE +M+ AGYVP E
Sbjct: 457 KDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNELERKMRLAGYVPDLEYAL 516
Query: 430 HDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITERE 489
HDV ++K ++ HSE+LAIA+GLI P GT + + KNL++C DCH A K+IS I R
Sbjct: 517 HDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLRVCGDCHSATKYISAIEGRV 576
Query: 490 ITVRDVNRYHHFKDGICSCGDYW 512
I VRD R+HHF+ G CSCGDYW
Sbjct: 577 IIVRDTTRFHHFRQGECSCGDYW 599
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
T L+ +Y C L +A +LF +PQ+++ WN +I YA +G E A+ L+ ++ + G+
Sbjct: 265 GTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGM 324
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRN 102
PD TF L AC+ ++ G ++R+
Sbjct: 325 KPDWITFVAVLSACNHAGFVDLGIEYFNSMVRD 357
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA-MHGHSTKALDLFEKM 233
NV ++ + + G + A +FE + K V+WN+M+ GY+ G A LF+++
Sbjct: 4 NVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRI 63
Query: 234 KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM-VRDYHIDPSVQHYTCMVDLLGHSGR 292
+PD ++ +L+ + R+FF+ M V+D + M+ +G
Sbjct: 64 P---EPDIFSYNIMLACYLHNADVESARLFFDQMPVKD------TASWNTMISGFSQNGM 114
Query: 293 LDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK-LIELEP 340
+D+A +L + M V+ + W A+++ G+V+ +L L K L E+ P
Sbjct: 115 MDQARELFLVMPVR-NSVSWNAMIS-----GYVESGDLDLAKQLFEVAP 157
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 18/189 (9%)
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLS 249
G +KVAR LF+++ E + S+N M+ Y + A F++M + D ++ ++S
Sbjct: 51 GKIKVARQLFDRIPEPDIFSYNIMLACYLHNADVESARLFFDQMPVK---DTASWNTMIS 107
Query: 250 ACSRGGLFDEGRMFFESM-VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPD 308
S+ G+ D+ R F M VR+ SV + M+ SG LD A L V P
Sbjct: 108 GFSQNGMMDQARELFLVMPVRN-----SVS-WNAMISGYVESGDLDLAKQLF---EVAPV 158
Query: 309 PGV--WGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLR 366
V W A++ G ++LAE E E+ + + + Y E KL
Sbjct: 159 RSVVAWTAMITGFMKFGKIELAEKYFE---EMPMKNLVTWNAMIAGYIENCQAENGLKLF 215
Query: 367 KLMIDRGIK 375
K M++ G +
Sbjct: 216 KRMVESGFR 224
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 127/311 (40%), Gaps = 54/311 (17%)
Query: 127 ARQVFDKILERDP-SEATLVTVISASADIAA----LPQGRELHGFSWRHRFELNVKVKTA 181
ARQ+FD+I E D S ++ +AD+ + Q SW
Sbjct: 56 ARQLFDRIPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASW-----------NT 104
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-- 239
++ +++ G++ AR LF + + VSWNAMI+GY G A LF EV P
Sbjct: 105 MISGFSQNGMMDQARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLF-----EVAPVR 159
Query: 240 DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
+ + +++ + G + +FE M ++ + M+ + + + L
Sbjct: 160 SVVAWTAMITGFMKFGKIELAEKYFEEMPMK-----NLVTWNAMIAGYIENCQAENGLKL 214
Query: 300 IMQM---RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHD----AGNYVILSNI 352
+M +P+P ++L C +KL + + +LI P AG ++ ++
Sbjct: 215 FKRMVESGFRPNPSSLSSVLLGCSNLSALKLGK-QVHQLICKSPVSWNITAGTSLL--SM 271
Query: 353 YARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWL 412
Y + + E KL +M + + +W +A +SG A H + K +L
Sbjct: 272 YCKCGDLEDAWKLFLVMPQKDV-----VTW-------NAMISGYAQHGAGE----KALYL 315
Query: 413 EGRMKEAGYVP 423
+M++ G P
Sbjct: 316 FDKMRDEGMKP 326
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/516 (40%), Positives = 300/516 (58%), Gaps = 15/516 (2%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + Y + + +A ++FD +P+R+ +N +I YA +G A L
Sbjct: 40 LGFLLCTRTNNAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGDVGSAQRL 99
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+L P T+ + +E RR+ E++ E D+ A+I
Sbjct: 100 FERVL----APTPVTWTSMVAGFCRAGDVESARRVFEEMP----ERDLVSWNAMISGCVG 151
Query: 121 CSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
V A +F ++E P+ T+V+V+SA AL G+ +H F + R + +
Sbjct: 152 NRLPVEALCLFRWMMEEGFVPNRGTVVSVLSACTGAGALETGKWVHVFVEKKRLRWDEFL 211
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK--DE 236
TALVDMYAKCG V++A +F LR + +WNAMI G AM+G+S KALD+F +M+
Sbjct: 212 GTALVDMYAKCGAVELALEVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQMELNGT 271
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
V PD +TFVGVL ACS G D G+ F ++ + Y ++ ++HY CMVDLL SG L EA
Sbjct: 272 VAPDEVTFVGVLLACSHAGFVDAGKEHFYTIPQKYGVELILEHYACMVDLLARSGHLQEA 331
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARA 356
LI +M +KPD VW ALL C+LH +VK+AE + E+E +G++V+LSN+YA
Sbjct: 332 HKLITEMPMKPDVVVWRALLGGCRLHKNVKMAENVIS---EMEATCSGDHVLLSNLYAAV 388
Query: 357 ANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRM 416
W GV +R+ M +GI+K CS +E+ H F+SGD SHP+ D+I+AKL + GRM
Sbjct: 389 GRWNGVEDVRRTMRSKGIEKIPGCSSVEMDGSIHEFISGDKSHPSYDDIHAKLIEIGGRM 448
Query: 417 KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCH 476
++ GYV T VF+D+E++EK + HSE+LAIAFGLI P + I KNL+ C DCH
Sbjct: 449 QQHGYVTETAEVFYDIEDEEKEQALGYHSEKLAIAFGLIGGPPEATIRIVKNLRFCTDCH 508
Query: 477 IAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
K +SKI REI VRD R+HHF+ G CSC D+W
Sbjct: 509 SFAKLVSKIYHREIVVRDRARFHHFRGGACSCNDFW 544
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
LH + F L + A + Y G V AR +F+ + + VS+N+MI GYA+ G
Sbjct: 33 LHAVCTKLGFLLCTRTNNAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGD 92
Query: 223 STKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
A LFE++ + P +T+ +++ R G + R FE M
Sbjct: 93 VGSAQRLFERV---LAPTPVTWTSMVAGFCRAGDVESARRVFEEM 134
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/506 (40%), Positives = 306/506 (60%), Gaps = 13/506 (2%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T LV Y+ A FD P+R++FL NV++ AY G A ++ + E +V
Sbjct: 79 TALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTRGEVAEARRVFDGMRERDMV 138
Query: 71 P-DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
+ +A+ L+ +V + D F ++++ Y K +A +
Sbjct: 139 SWNTMIHGYAVNGEVDLA---------REVFNGMDDRDAFSWSSMMSAYTKGRRSKDALE 189
Query: 130 VFDKILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYA 187
++ ++ +P T+V+V+SA +D+ AL G E+H F + EL+VK+ TAL+DMYA
Sbjct: 190 LWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYA 249
Query: 188 KCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVG 246
KCG ++ + +F + K V++W++MI G A HG AL LF +M E +QP+ +TF+G
Sbjct: 250 KCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIG 309
Query: 247 VLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK 306
VL +C+ GL +G+ +F SM + + P VQHY CMVDLLG SG ++EA LI M +
Sbjct: 310 VLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFE 369
Query: 307 PDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLR 366
PD +W ALL +C+++ +V++AE A+ KL L+PH G+YV+LSNIYA+A +WEGVA++R
Sbjct: 370 PDAVIWRALLGACRIYKNVEVAEEAMAKLRVLDPHADGHYVLLSNIYAQANSWEGVAEMR 429
Query: 367 KLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTE 426
+ + I++ S IE +N H F+SGD SHP EIY L + R+++AGY P T
Sbjct: 430 RTLRRERIQRIPGRSSIEWQNTIHEFISGDRSHPRSKEIYKMLGEMMDRLRQAGYKPMTG 489
Query: 427 SVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKIT 486
V D++ K + HSE+LA+AFGL+ TP G+ L ITKNL+ C+DCH AIK I+ +
Sbjct: 490 LVLQDIDEQSKERALAEHSEKLAVAFGLLTTPAGSTLRITKNLRACEDCHSAIKLIALLY 549
Query: 487 EREITVRDVNRYHHFKDGICSCGDYW 512
ER++ +RD NR+HHF +G CSC DYW
Sbjct: 550 ERKLIIRDRNRFHHFSEGRCSCKDYW 575
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 20/266 (7%)
Query: 69 LVPDNFTFPFALKACSALSAIEEGRR--------IHEDVIRNKWET-DVFVGAALIDMYA 119
L+ ++F+ A++A +ALSA R +H +++ + D+FV AL++ YA
Sbjct: 27 LLDNSFSLSLAMQASAALSASVPAMRDLGLGAASLHARALKSGFAAADLFVRTALVEAYA 86
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGREL-HGFSWRHRFELNVKV 178
K AR FD+ RD + +++A + + R + G R N
Sbjct: 87 KAGRADLARAAFDEAPRRDVFLCNV--MLAAYVTRGEVAEARRVFDGMRERDMVSWNT-- 142
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-V 237
++ YA G V +AR +F + ++ SW++M++ Y S AL+L+ +M+ V
Sbjct: 143 ---MIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAACV 199
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
PD T V VLSACS G G + V ++ V+ T ++D+ G ++ +
Sbjct: 200 NPDCTTMVSVLSACSDMGALAVGAEVHQ-FVESNGVELDVKLGTALIDMYAKCGDIENSV 258
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHG 323
+ M VK D W +++ HG
Sbjct: 259 RVFHSMPVK-DVLTWSSMIIGLANHG 283
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 49/86 (56%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T L+ +Y+ C + N+ ++F +P +++ W+ +I A +G A+ L+ R+L G
Sbjct: 240 LGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEG 299
Query: 69 LVPDNFTFPFALKACSALSAIEEGRR 94
L P+ TF L +C+ L + +G++
Sbjct: 300 LQPNEVTFIGVLISCTHLGLVSDGKK 325
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/571 (35%), Positives = 304/571 (53%), Gaps = 69/571 (12%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T ++ Y + L A + + ++ WN +I YA G Y A E++ +++ +
Sbjct: 227 TTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQ 286
Query: 71 PDNFTFPFALKACSALSAIEEGRRIH----EDVIRNKWETDVFVGAALIDMYAKCS---- 122
D FTF + C+ G+ +H + V + + V ALI Y KC
Sbjct: 287 LDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDI 346
Query: 123 ---------------------------CVVNARQVFDKILER------------------ 137
C+ A+ F+++ E+
Sbjct: 347 AQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFA 406
Query: 138 ---------------DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
+P + I + + + +L GR+LH R+ +E ++ AL
Sbjct: 407 EEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNAL 466
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDH 241
+ MYA+CG+V A LF + +SWNAMI HG T+A++LFE+M K+ + PD
Sbjct: 467 ITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDR 526
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
I+F+ V+SACS GL EGR +F+SM Y ++P +HY ++DLL +G+ EA +++
Sbjct: 527 ISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVME 586
Query: 302 QMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEG 361
M +P +W ALL C++HG++ L A E+L EL+P G YV+LSN+YA A W
Sbjct: 587 SMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWND 646
Query: 362 VAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGY 421
+AK+RKLM DRG+KK CSWIEV+NK H+FL GDA+HP +IY L+ L M++ GY
Sbjct: 647 MAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIGY 706
Query: 422 VPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKF 481
VP T+ V HDVE+D K + + HSE+LA+A+G + P G + + KNL+IC DCH A KF
Sbjct: 707 VPDTKCVLHDVESDLKEHELSTHSEKLAVAYGFMKLPHGATVRVFKNLRICGDCHNAFKF 766
Query: 482 ISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+SK+ REI VRD R+HHF+DG CSCGDYW
Sbjct: 767 MSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 139/326 (42%), Gaps = 54/326 (16%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
V T L+ YSA L + ++F P R+ +N +I AY+ N AIEL+ +
Sbjct: 80 VARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQ 139
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEG-RRIHEDVIRNKWETDVFVGAALIDMYAKCS-- 122
PDN+TF L A + ++ E+ +++H V+++ V ALI Y KC+
Sbjct: 140 RDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAAS 199
Query: 123 -------CVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELN 175
+ AR++FD++ RD SW
Sbjct: 200 PSAQSSSLMAEARKLFDEMPNRDE--------------------------LSW------- 226
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-K 234
T ++ Y K + A+ +K V+WNAMI+GYA G +A ++F KM
Sbjct: 227 ----TTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIM 282
Query: 235 DEVQPDHITFVGVLSACSRGGLFDEGR---MFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
++Q D TF V+S C+ G F G+ +F V + D ++ ++ G
Sbjct: 283 SKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCG 342
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLN 317
++D A ++ +M + D W +L+
Sbjct: 343 KVDIAQEIFNKMPER-DLVSWNIILS 367
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/548 (38%), Positives = 305/548 (55%), Gaps = 36/548 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF +A+ L +YS C L A ++FD++PQ++ W +I YA NG E A+
Sbjct: 300 VGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLS 359
Query: 61 YYRLLEIGLV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
+ + GLV D F L A L + IH V + +E +V V ALIDMYA
Sbjct: 360 FRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYA 419
Query: 120 KCSCVVNARQVF----------------DKILERD------------------PSEATLV 145
K V +A +V D +E D P+E T
Sbjct: 420 KSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFS 479
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
++I A A L QG +LH + + V + LVDMY KCGL+ ++ LF ++ +
Sbjct: 480 SMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYR 539
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
++WNA+I +A HGH +A+ F++M ++P+HI FV +L+ACS GL DEG +F
Sbjct: 540 TDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYF 599
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
SM + I+P +HY+C++D G +GRLDEA I +M +KP+ W +LL +C++ G
Sbjct: 600 YSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGS 659
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
+L E+A + L++LEP + G +V LS IYA WE V +RKLM D IKK SW++
Sbjct: 660 KELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVD 719
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
K H F S D SHP +IY KL+ L R+KE GY+P T + ++E+ K ++ H
Sbjct: 720 SNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYH 779
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
SER+A+AF LI+ P +++ KNL+IC DCH A KFI K+ R+I VRD +R+HHF +G
Sbjct: 780 SERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNG 839
Query: 505 ICSCGDYW 512
CSCGDYW
Sbjct: 840 RCSCGDYW 847
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 163/364 (44%), Gaps = 39/364 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
LA L+ +YS C L +A +LF +P+RN W L+ + N + A+ + + G
Sbjct: 208 LANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAG 267
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P F A +A +AL A R ++T++FV + L DMY+KC + A
Sbjct: 268 VAPTRFALSSAARAAAALGAPLRARSCTASA-SVGFDTELFVASNLADMYSKCGLLSEAC 326
Query: 129 QVFDKILERDPSEAT----------------------------------LVTVISASADI 154
+VFD++ ++D T +V+SAS +
Sbjct: 327 RVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGL 386
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE-QLREKRVVSWNAM 213
+ +H + FEL V V+ AL+DMYAK V+ A + + VVS +M
Sbjct: 387 KDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSM 446
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I GY +AL ++ +++ + V+P+ TF ++ C+ L ++G +++
Sbjct: 447 IDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDL 506
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I S T +VD+ G G + + L ++ + D W A++N HGH + A A
Sbjct: 507 IRDSFVGST-LVDMYGKCGLISLSMQLFNEIEYRTDIA-WNAVINVFAQHGHGREAIQAF 564
Query: 333 EKLI 336
+++I
Sbjct: 565 DRMI 568
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 128/339 (37%), Gaps = 45/339 (13%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
LA L+ +YS C L +A +LF +P+RN W L+ + N + A+ + + G
Sbjct: 58 LANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAG 117
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P R I+E N + A+ ++ + +V
Sbjct: 118 VAPT--------------------RLIYETKFHNTLGPKHTLAAS--HCHSGPTLMV--- 152
Query: 129 QVFDKILERDPSEATLVTVISAS-----ADIAALPQGRELHGFSWRHRFELNVKVKTA-- 181
+ + + L R P+ A TV AS L +GR LH R L+ +
Sbjct: 153 KYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHA-----RLVLSGAAAASTF 207
Query: 182 ----LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMH-GHSTKALDLFEKMKDE 236
L+ MY+ C + A LF + + VSW +++G + + H+ +
Sbjct: 208 LANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAG 267
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
V P A + G R S + + V + + D+ G L EA
Sbjct: 268 VAPTRFALSSAARAAAALGAPLRARSCTASASVGFDTELFVA--SNLADMYSKCGLLSEA 325
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
C + QM K D W A+++ +G ++ A L+ +
Sbjct: 326 CRVFDQMPQK-DAVAWTAMIDGYAKNGSLEAAVLSFRDM 363
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/524 (38%), Positives = 300/524 (57%), Gaps = 42/524 (8%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L A+ +F I N+F WN + R YA + A+ Y +++ + PD T+PF LKA
Sbjct: 80 LSYAYNVFTMIHNPNVFTWNTMTRGYAESDNPSPALRFYRQMIVSRIEPDTHTYPFLLKA 139
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---- 138
S + EG IH IRN +E+ VFV +L+ +YA C +A VF+ + +RD
Sbjct: 140 ISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAHNVFELMRDRDLVAX 199
Query: 139 ------------PSEA-----------------TLVTVISASADIAALPQGRELHGFSWR 169
PSEA T+V+++SASA++ AL GR +H + +
Sbjct: 200 ISVINGFALNGRPSEALTLFREMSAEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLK 259
Query: 170 HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
N V +L+D+YAKC + +E E+ VSW ++I G A++G +AL+L
Sbjct: 260 VGLRENSHVTNSLLDLYAKCDAI------WEX--ERNAVSWTSLIVGLAVNGFGEEALEL 311
Query: 230 FEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
F +M+ + + P ITFVGVL ACS G+ DEG +F M ++ I P ++HY CMVDLL
Sbjct: 312 FREMEGQGLVPSEITFVGVLYACSHCGMLDEGFDYFRRMKEEFGIMPRIEHYGCMVDLLS 371
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
+G + +A + I M V+P+ W LL +C +HGH+ L E A L++LEP +G+YV+
Sbjct: 372 RAGLVKQAYEYIQNMPVQPNAVTWRTLLGACTIHGHLGLGETARSHLLKLEPKHSGDYVL 431
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAK 408
LSN+Y W V +R+ M+ G+KK+ S +E+ N+ + F G+ SHP ++YA
Sbjct: 432 LSNLYTSECRWADVQLIRRSMLKDGVKKTSGYSLVELGNRVYEFTMGNRSHPQSQDVYAL 491
Query: 409 LKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKN 468
L+ + +K GYVP T +V D+E +EK + HSE+ AIAF +NT GT + + KN
Sbjct: 492 LEKITELLKLEGYVPHTANVLADIEEEEKEQALSYHSEKXAIAFMRLNTAPGTTIRVMKN 551
Query: 469 LKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L++C DCH+AIK ++K+ +REI +RD R+HHF+ G CSC DYW
Sbjct: 552 LRVCADCHMAIKLMAKVYDREIVIRDRGRFHHFRGGSCSCKDYW 595
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 33/251 (13%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+H+Y+AC +AH +F+ + R+L +I +A NG A+ L+
Sbjct: 160 GFESLVFVQNSLLHIYAACGDTESAHNVFELMRDRDLVAXISVINGFALNGRPSEALTLF 219
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ PD FT L A + L A+E GRR+H +++ + V +L+D+YAKC
Sbjct: 220 REMSAEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLRENSHVTNSLLDLYAKC 279
Query: 122 SCV------------------VN-----ARQVFDKILERD--PSEATLVTVISASADIAA 156
+ VN A ++F ++ + PSE T V V+ A +
Sbjct: 280 DAIWEXERNAVSWTSLIVGLAVNGFGEEALELFREMEGQGLVPSEITFVGVLYACSHCGM 339
Query: 157 LPQGRELHGFSWRHRFELNVKVKTA----LVDMYAKCGLVKVARNLFEQLR-EKRVVSWN 211
L +G + + R + E + + +VD+ ++ GLVK A + + + V+W
Sbjct: 340 LDEGFD---YFRRMKEEFGIMPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVTWR 396
Query: 212 AMITGYAMHGH 222
++ +HGH
Sbjct: 397 TLLGACTIHGH 407
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 14/124 (11%)
Query: 161 RELHGFSWRHRFELNVK-----VKTALVDMYAKCG--------LVKVARNLFEQLREKRV 207
R +H FS RH LN + +V + A ++ A N+F + V
Sbjct: 36 RXIHAFSIRHGVLLNNPDMGKHLIFTIVSLSAPMSYAYNVFTWVLSYAYNVFTMIHNPNV 95
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
+WN M GYA + + AL + +M ++PD T+ +L A S+ EG
Sbjct: 96 FTWNTMTRGYAESDNPSPALRFYRQMIVSRIEPDTHTYPFLLKAISKSLNVREGEAIHSV 155
Query: 267 MVRD 270
+R+
Sbjct: 156 TIRN 159
>gi|357487543|ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
gi|355515394|gb|AES97017.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
Length = 565
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/530 (37%), Positives = 308/530 (58%), Gaps = 45/530 (8%)
Query: 28 QLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL----EIGLVPDNFTFPFALKAC 83
Q+ I N F WN+LI++Y+ + ++ L Y+ + E L PD T+PF LKAC
Sbjct: 36 QILRTIHTPNSFTWNILIQSYSKSTLHKQKAILLYKAIITEQENELFPDKHTYPFVLKAC 95
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILE------- 136
+ L ++ EG+++H V++ +E D ++ +LI YA C + AR+VFD++ E
Sbjct: 96 AYLFSLFEGKQVHAHVLKLGFELDTYICNSLIHFYASCGYLETARKVFDRMCEWRNVVSW 155
Query: 137 --------------------------RDPSEATLVTVISASADIAALPQGRELHGFSWRH 170
+P T+ +VI A + +L G +H F +
Sbjct: 156 NVMIDSYAKVGDYDIVLIMFCEMMKVYEPDCYTMQSVIRACGGLGSLSLGMWVHAFVLKK 215
Query: 171 ---RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKAL 227
+V V T LVDMY KCG +++A+ +FE + + V SWN++I G+A+HG + AL
Sbjct: 216 CDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGKAKAAL 275
Query: 228 DLFEKMK--DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
D F +M +++ P+ ITFVGVLSAC+ G+ DEG M+FE M ++Y+++PS+ HY C+VD
Sbjct: 276 DYFVRMVKVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVD 335
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC-KLHGHVKLAELALEKLIELEPHDAG 344
L +G + EA +++ +M +KPD +W +LL++C K H V+L+E +++ E G
Sbjct: 336 LYARAGHIQEALNVVSEMPIKPDAVIWRSLLDACYKQHASVELSEEMAKQIFESNGSVCG 395
Query: 345 N-YVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCD 403
YV+LS +YA A+ W V LRKLM D+G+ K CS IE+ AH F +GD +HP
Sbjct: 396 GAYVLLSKVYASASRWNDVGLLRKLMNDKGVSKKPGCSLIEINGAAHEFFAGDTNHPQSK 455
Query: 404 EIYAKLKWLEGRMKEAGYVPG-TESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTR 462
+IY + ++ +++ GY+P + + D N+ K N + HSERLAIAFGL+N+
Sbjct: 456 DIYKFMNEIQEKLESVGYLPDYSGAPLIDEINEGKQNTMRLHSERLAIAFGLLNSKPSMP 515
Query: 463 LLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ + KNL++C+DCH K IS+I EI VRD R+HHFKDG CSC DYW
Sbjct: 516 IRVFKNLRVCNDCHKVTKLISRIYNVEIIVRDRVRFHHFKDGSCSCMDYW 565
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 127/265 (47%), Gaps = 19/265 (7%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQ-RNLFLWNVLIRAYAWNGPYEVAIE 59
+GF + L+H Y++C L A ++FDR+ + RN+ WNV+I +YA G Y++ +
Sbjct: 114 LGFELDTYICNSLIHFYASCGYLETARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLI 173
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR---NKWETDVFVGAALID 116
++ ++++ PD +T ++AC L ++ G +H V++ DV V L+D
Sbjct: 174 MFCEMMKV-YEPDCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVD 232
Query: 117 MYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
MY KC + A+QVF+ + RD S + + A A L F + E V
Sbjct: 233 MYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGKAKAA----LDYFVRMVKVEKIV 288
Query: 177 KVKTALVDMYAKC---GLVKVARNLFEQLR-----EKRVVSWNAMITGYAMHGHSTKALD 228
V + + C G+V FE + E +V + ++ YA GH +AL+
Sbjct: 289 PNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEALN 348
Query: 229 LFEKMKDEVQPDHITFVGVLSACSR 253
+ +M ++PD + + +L AC +
Sbjct: 349 VVSEM--PIKPDAVIWRSLLDACYK 371
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 125/262 (47%), Gaps = 10/262 (3%)
Query: 87 SAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDK--ILERD----PS 140
++I ++IH ++R + F LI Y+K + + K I E++ P
Sbjct: 25 NSISHVKQIHAQILRTIHTPNSFTWNILIQSYSKSTLHKQKAILLYKAIITEQENELFPD 84
Query: 141 EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
+ T V+ A A + +L +G+++H + FEL+ + +L+ YA CG ++ AR +F+
Sbjct: 85 KHTYPFVLKACAYLFSLFEGKQVHAHVLKLGFELDTYICNSLIHFYASCGYLETARKVFD 144
Query: 201 QLREKR-VVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDE 259
++ E R VVSWN MI YA G L +F +M +PD T V+ AC G
Sbjct: 145 RMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEMMKVYEPDCYTMQSVIRACGGLGSLSL 204
Query: 260 GRMFFESMVR--DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
G +++ D ++ V TC+VD+ G L+ A + M + D W +++
Sbjct: 205 GMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYR-DVSSWNSIIL 263
Query: 318 SCKLHGHVKLAELALEKLIELE 339
+HG K A +++++E
Sbjct: 264 GFAVHGKAKAALDYFVRMVKVE 285
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/571 (37%), Positives = 317/571 (55%), Gaps = 65/571 (11%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P +A +L+ +Y + + +A +LF N++L+ LI + G Y AI L+ +++
Sbjct: 59 PFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSFGSYTDAINLFCQMVR 118
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
++ DN+ LKAC A+ G+ +H V+++ D + L+++Y KC + +
Sbjct: 119 KHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIALKLVELYGKCGVLED 178
Query: 127 AR-------------------------------QVFDKILERD----------------- 138
AR +VF+++ RD
Sbjct: 179 ARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEF 238
Query: 139 ----------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
P+E T V V+SA A + AL GR +H + + E+N V AL
Sbjct: 239 NRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMRKCGVEVNRFVAGAL 298
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDH 241
++MY++CG + A+ LF+ +R K V ++N+MI G A+HG S +A++LF +M K+ V+P+
Sbjct: 299 INMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLALHGKSIEAVELFSEMLKERVRPNG 358
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
ITFVGVL+ACS GGL D G FESM + I+P V+HY CMVD+LG GRL+EA D I
Sbjct: 359 ITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDILGRVGRLEEAFDFIG 418
Query: 302 QMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEG 361
+M V+ D + +LL++CK+H ++ + E + L E D+G++++LSN YA W
Sbjct: 419 RMGVEADDKMLCSLLSACKIHKNIGMGEKVAKLLSEHYRIDSGSFIMLSNFYASLGRWSY 478
Query: 362 VAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGY 421
A++R+ M GI K CS IEV N H F SGD HP IY KL+ L K GY
Sbjct: 479 AAEVREKMEKGGIIKEPGCSSIEVNNAIHEFFSGDLRHPERKRIYKKLEELNYLTKFEGY 538
Query: 422 VPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKF 481
+P TE HD+++++K + HSERLAI +GL++T T L + KNL+ICDDCH IK
Sbjct: 539 LPATEVALHDIDDEQKELALAVHSERLAICYGLVSTEAYTTLRVGKNLRICDDCHAMIKL 598
Query: 482 ISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I+KIT R+I VRD NR+HHF++G CSC DYW
Sbjct: 599 IAKITRRKIVVRDRNRFHHFENGECSCKDYW 629
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 143/356 (40%), Gaps = 45/356 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNL----------------------- 38
G G +A KLV LY C L +A ++FD +P+R++
Sbjct: 155 GLGLDRSIALKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVF 214
Query: 39 --------FLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIE 90
W ++I NG + +E++ + G+ P+ TF L AC+ L A+E
Sbjct: 215 NEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALE 274
Query: 91 EGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISA 150
GR IH + + E + FV ALI+MY++C + A+ +FD + +D S T ++I
Sbjct: 275 LGRWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVS--TYNSMIGG 332
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-----EK 205
A + EL + R N +++ + GLV + +FE + E
Sbjct: 333 LALHGKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEP 392
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V + M+ G +A D +M V+ D +LSAC G +
Sbjct: 393 EVEHYGCMVDILGRVGRLEEAFDFIGRMG--VEADDKMLCSLLSACKIHKNIGMGEKVAK 450
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWGALLNS 318
+ Y ID + + + GR A ++ +M + +PG +N+
Sbjct: 451 LLSEHYRIDSG--SFIMLSNFYASLGRWSYAAEVREKMEKGGIIKEPGCSSIEVNN 504
>gi|297837569|ref|XP_002886666.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
gi|297332507|gb|EFH62925.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/552 (37%), Positives = 319/552 (57%), Gaps = 57/552 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWN-GPYEVAIELYYRLLEI 67
L K++ L S+ ++ A ++FD I + F+WN LIRA A + E A LY ++LE
Sbjct: 66 LYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLER 125
Query: 68 G-LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
G PD TFPF LKAC+ + + EG+++H ++++ + DV+V LI Y C C+
Sbjct: 126 GESAPDKHTFPFVLKACAYIFGLSEGKQVHCQIVKHGFSGDVYVNNGLIHFYGSCGCLDL 185
Query: 127 ARQVFDKILER--------------------------------DPSEATLVTVISASADI 154
AR+VFD++ ER +P T+ +V+SA A +
Sbjct: 186 ARKVFDEMPERSLVSWNSMIDALVRVGEYDSALQLFRDMQKSFEPDGYTMQSVLSACAGL 245
Query: 155 AALPQGRELHGFSWRH---RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+L G H F R+ ++V +K +L++MY KCG +++A +F+ +R+ + SWN
Sbjct: 246 GSLSLGTWSHVFLLRNCDVDVAMDVLIKNSLIEMYCKCGSLRMAEQVFQGMRKHDLASWN 305
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE---VQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
AMI G+A HG + +A++ F+ M E V+P+ +TFV +L AC+ G+ ++GR +F+ MV
Sbjct: 306 AMILGFATHGKAEEAMNCFDCMVKEGKNVKPNSVTFVALLIACNHRGMVNKGRQYFDMMV 365
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC-KLHGHVKL 327
R+Y I+P+++HY C++DLL +G + EA D++M M +KPD +W +LL++C K V+L
Sbjct: 366 REYGIEPALEHYGCIIDLLARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVEL 425
Query: 328 AELALEKLI-ELEPHDAGN------YVILSNIYARAANWEGVAKLRKLMIDRGIKKSIAC 380
+E +I +E + + N YV+LS +YA A W V +RKLM D GI+K C
Sbjct: 426 SEEIARNIIGTMEDNQSSNSNCSGAYVLLSRVYASANRWNDVGIVRKLMSDHGIRKEPGC 485
Query: 381 SWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANM 440
S IE+ ++ F +GD SHP +IY +LK ++ R++ S+ + K
Sbjct: 486 SSIEINGISNEFFAGDTSHPQTKQIYQQLKVIDDRLR---------SIVDATNDSSKEYS 536
Query: 441 ICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHH 500
+ HSERLAIAFGLI+ P T + I KNL++C DCH K ISK+ EI VRD R+HH
Sbjct: 537 LRLHSERLAIAFGLISLPPQTPIRIFKNLRVCSDCHEVTKLISKVFNTEIIVRDRVRFHH 596
Query: 501 FKDGICSCGDYW 512
FKDG CSC DYW
Sbjct: 597 FKDGSCSCLDYW 608
>gi|356524110|ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Glycine max]
Length = 611
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/559 (37%), Positives = 322/559 (57%), Gaps = 52/559 (9%)
Query: 6 HP---VLATKLVHLYSACD--CLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYE---VA 57
HP L T ++ YS+ L A ++F P N F+WN LIR YA + A
Sbjct: 53 HPNAIFLYTNILQHYSSLTQPNLTYATRVFHHFPNPNSFMWNTLIRVYARSTNTNHKHKA 112
Query: 58 IELYYRLL---EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAAL 114
+ELY ++ E VPDN TFP LKAC+ ++ EG+++H V+++ +E+D ++ +L
Sbjct: 113 MELYKTMMTMEEKTAVPDNHTFPIVLKACAYTFSLCEGKQVHAHVLKHGFESDTYICNSL 172
Query: 115 IDMYAKCSCVVNARQVFDKILER--------------------------------DPSEA 142
+ YA C C+ A ++F K+ ER DP
Sbjct: 173 VHFYATCGCLDLAEKMFYKMSERNEVSWNIMIDSYAKGGIFDTALRMFGEMQRVHDPDGY 232
Query: 143 TLVTVISASADIAALPQGRELHGFSWRH---RFELNVKVKTALVDMYAKCGLVKVARNLF 199
T+ +VISA A + AL G +H + + +V V T LVDMY K G +++A+ +F
Sbjct: 233 TMQSVISACAGLGALSLGLWVHAYILKKCDKNMVDDVLVNTCLVDMYCKSGELEIAKQVF 292
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK--DEVQPDHITFVGVLSACSRGGLF 257
E + + + +WN+MI G AMHG + AL+ + +M +++ P+ ITFVGVLSAC+ G+
Sbjct: 293 ESMAFRDLNAWNSMILGLAMHGEAKAALNYYVRMVKVEKIVPNSITFVGVLSACNHRGMV 352
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
DEG + F+ M ++Y+++P ++HY C+VDL +GR++EA +L+ +M +KPD +W +LL+
Sbjct: 353 DEGIVHFDMMTKEYNVEPRLEHYGCLVDLFARAGRINEALNLVSEMSIKPDAVIWRSLLD 412
Query: 318 SC-KLHGHVKLAELALEKLIELEPH--DAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
+C K + V+L+E +++ E E +G YV+LS +YA A W V LRKLM ++G+
Sbjct: 413 ACCKQYASVELSEEMAKQVFESEGSVCSSGVYVLLSKVYASACRWNDVGLLRKLMSEKGV 472
Query: 375 KKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPG-TESVFHDVE 433
K CS IE+ H F +GD +HP + IY + +E +++ GY+P + + D
Sbjct: 473 TKEPGCSIIEIDGVVHEFFAGDTTHPKSENIYKVVTEIEEKLESIGYLPDYSGAPMVDEV 532
Query: 434 NDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVR 493
ND K N + HSERLAIAFG++N+ + + KNL++C+DCH K IS+I EI VR
Sbjct: 533 NDGKLNTLRLHSERLAIAFGILNSKPDVPIRVFKNLRVCNDCHRVTKLISRIYNVEIIVR 592
Query: 494 DVNRYHHFKDGICSCGDYW 512
D R+HHFKDG CSC DYW
Sbjct: 593 DRARFHHFKDGTCSCMDYW 611
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 122/264 (46%), Gaps = 20/264 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + LVH Y+ C CL A ++F ++ +RN WN++I +YA G ++ A+ ++
Sbjct: 161 GFESDTYICNSLVHFYATCGCLDLAEKMFYKMSERNEVSWNIMIDSYAKGGIFDTALRMF 220
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR---NKWETDVFVGAALIDMY 118
+ + PD +T + AC+ L A+ G +H +++ DV V L+DMY
Sbjct: 221 GEMQRVH-DPDGYTMQSVISACAGLGALSLGLWVHAYILKKCDKNMVDDVLVNTCLVDMY 279
Query: 119 AKCSCVVNARQVFDKILERDPSE-ATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
K + A+QVF+ + RD + +++ ++ + A L+ + + E V
Sbjct: 280 CKSGELEIAKQVFESMAFRDLNAWNSMILGLAMHGEAKA-----ALNYYVRMVKVEKIVP 334
Query: 178 VKTALVDMYAKC--------GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDL 229
V + + C G+V E E R+ + ++ +A G +AL+L
Sbjct: 335 NSITFVGVLSACNHRGMVDEGIVHFDMMTKEYNVEPRLEHYGCLVDLFARAGRINEALNL 394
Query: 230 FEKMKDEVQPDHITFVGVLSACSR 253
+M ++PD + + +L AC +
Sbjct: 395 VSEMS--IKPDAVIWRSLLDACCK 416
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/559 (36%), Positives = 298/559 (53%), Gaps = 69/559 (12%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
+H A F+ I +WN +I Y +G A EL+ R++ + PD FTF L A
Sbjct: 246 VHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSA 305
Query: 83 CSALSAIEEGR-------RIHEDVI-------------------RNKWETDVFVGAALID 116
C+ G+ R+ D + + T +F L D
Sbjct: 306 CANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKD 365
Query: 117 M---------YAKCSCVVNARQVFDKI-------------------LERD---------- 138
+ Y + C+ NA ++F ++ L D
Sbjct: 366 VVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRS 425
Query: 139 ----PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV 194
P + T ++A ++ AL G++LH + FE + AL+ MYA+CG VK
Sbjct: 426 EDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKD 485
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSR 253
AR +F + VSWNAMI+ HGH +AL+LF++M + + PD I+F+ +L+AC+
Sbjct: 486 ARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNH 545
Query: 254 GGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWG 313
GL D+G +FESM RD+ I P HY ++DLLG +GR+ EA DLI M +P P +W
Sbjct: 546 AGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWE 605
Query: 314 ALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRG 373
A+L+ C+++G ++L A ++L ++ P G Y++LSN Y+ A W A++RKLM DRG
Sbjct: 606 AILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRG 665
Query: 374 IKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVE 433
+KK CSWIEV NK H FL GD HP+ E+Y L+ + +M++ GYVP T+ D+
Sbjct: 666 VKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMA 725
Query: 434 NDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVR 493
EK ++ HSERLA++FGL+ P G + + KNLKIC DCH A+ F+S+ REI VR
Sbjct: 726 PHEKEYVLFAHSERLAVSFGLLKLPAGATVTVLKNLKICGDCHTAMMFMSRAVGREIVVR 785
Query: 494 DVNRYHHFKDGICSCGDYW 512
DV R+HHFKDG CSCG+YW
Sbjct: 786 DVRRFHHFKDGECSCGNYW 804
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 151/375 (40%), Gaps = 78/375 (20%)
Query: 1 MGFGFHPVLATKLVHLYSACDC---LHNAHQLFDRIPQRNLF------------------ 39
+G G ++ L+ LY CD +A ++ D +P+++
Sbjct: 190 LGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAA 249
Query: 40 -------------LWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSAL 86
+WN +I Y +G A EL+ R++ + PD FTF L AC+
Sbjct: 250 RSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANA 309
Query: 87 SAIEEGRRIHEDVIRNK----WETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEA 142
G+ +H IR + E + V AL+ +Y+K + A ++FD +
Sbjct: 310 GFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSM-------- 361
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
TL V+ SW ++ Y + G + A +F+++
Sbjct: 362 TLKDVV------------------SW-----------NTILSGYIESGCLDNAARIFKEM 392
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR 261
K +SW M++GY G + AL LF +M+ E V+P T+ G ++AC G G+
Sbjct: 393 PYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGK 452
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
+V+ + S ++ + G + +A L+ + D W A++++
Sbjct: 453 QLHAHLVQ-CGFEASNSAGNALLTMYARCGAVKDA-RLVFLVMPNVDSVSWNAMISALGQ 510
Query: 322 HGHVKLAELALEKLI 336
HGH + A ++++
Sbjct: 511 HGHGREALELFDQMV 525
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 45/255 (17%)
Query: 107 DVFVGAALIDMYAKCSCVVNARQVFDKILERD----PSEATLVTVISASADI--AALPQG 160
D + A+I +A+ S A VF +L D P + + +++SA + A+
Sbjct: 121 DTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHC 180
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAKC---GLVKVARNLFEQLREKRVVSWNAM---- 213
+LH + + V AL+ +Y KC G+ + AR + +++ EK ++W +
Sbjct: 181 TQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGH 240
Query: 214 ---------------------------ITGYAMHGHSTKALDLFEKM-KDEVQPDHITFV 245
I+GY G +A +LF +M + PD TF
Sbjct: 241 VRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFT 300
Query: 246 GVLSACSRGGLFDEGRMFFESMVR---DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
+LSAC+ G F G+ +R D+ + ++ +V L SG++ A +
Sbjct: 301 SLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDS 360
Query: 303 MRVKPDPGVWGALLN 317
M +K D W +L+
Sbjct: 361 MTLK-DVVSWNTILS 374
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF L+ +Y+ C + +A +F +P + WN +I A +G A+EL+
Sbjct: 462 GFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELF 521
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN---KWETDVFVGAALIDMY 118
+++ G+ PD +F L AC+ +++G + E + R+ D + A LID+
Sbjct: 522 DQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHY--ARLIDLL 579
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISA 150
+ + AR + K + +P+ A ++S
Sbjct: 580 GRAGRIGEARDLI-KTMPFEPTPAIWEAILSG 610
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/551 (36%), Positives = 315/551 (57%), Gaps = 40/551 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF V+ ++ +YS C ++ A +F+ +P RNL WN +I Y G E A+ L+
Sbjct: 103 GFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLF 162
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK--WETDVFVGAALIDMYA 119
++ E+G D FTF LKACS L AI+EG +IH +I + + V ALID+Y
Sbjct: 163 QKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYV 222
Query: 120 KCSCVVNARQVFDKILE--------------------------RDPSEAT-------LVT 146
KC + AR+VF I E R E++ L +
Sbjct: 223 KCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSS 282
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ AD A + QG+++H F+ + +++ V +++DMY KCG++ A LF ++ +
Sbjct: 283 MMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARN 342
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V+SW MITGY HG +A+ LF++M+ D +PD +T++ VL CS GL ++G+ +F
Sbjct: 343 VISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFS 402
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
+ + I V+HY CMVDLLG +GRL EA +L+ M ++ + G+W LL++C++HG +
Sbjct: 403 RLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDL 462
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+L + L+ L+ + NYV++SNIYA A W+ ++R+L+ + +KK SW+E+
Sbjct: 463 ELGKEVGGILLRLDSENPVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEI 522
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEA-GYVPGTESVFHDVENDEKANMICCH 444
+ H F GD +HP ++I+ LK +E RMKE GYV G + HDVE + K + + H
Sbjct: 523 DKEVHFFYGGDDTHPLTEKIHEILKEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVH 582
Query: 445 SERLAIAFGLI--NTPDGTRLL-ITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF 501
SE+LAI L+ +G +++ + KNL++C DCH IK +SKI VRD NR+H F
Sbjct: 583 SEKLAIGLALVCGGLEEGRKVIRVFKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRF 642
Query: 502 KDGICSCGDYW 512
+DG+CSC DYW
Sbjct: 643 EDGLCSCRDYW 653
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 194/418 (46%), Gaps = 44/418 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MGFGF +L+ L+ +Y C L A +FDR+ +RN+ W L+ + NG ++ L
Sbjct: 1 MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ G+ P++FTF LKAC L+ ++ GR+IH+ ++ ++ VG ++IDMY+K
Sbjct: 61 FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + A +F+ + R+ E T +
Sbjct: 121 CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180
Query: 148 ISASADIAALPQGRELHGF--SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+ A +D+ A+ +G ++H F + + +N V AL+D+Y KCG + +AR +F + EK
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK 240
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFF 264
V+SW A+I GYA G+ ++++LF ++++ +Q D ++ + L +G+
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMH 300
Query: 265 ESMVRDYHIDPSVQHYTC--MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
++ + V C ++D+ G ++EA L +M + + W ++ H
Sbjct: 301 AFAIK---VPSGVDISVCNSILDMYLKCGMINEAERLFSEMPAR-NVISWTVMITGYGKH 356
Query: 323 GHVKLAELALE--KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
G K A + +L EP D +L +G +L GIK +
Sbjct: 357 GLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARV 414
>gi|449450898|ref|XP_004143199.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Cucumis sativus]
Length = 603
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/551 (38%), Positives = 307/551 (55%), Gaps = 39/551 (7%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + V L++ Y + AHQLFD +P N+ W L+ Y NG A+ L
Sbjct: 53 LGFLNNTVNVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFL 112
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ +L +VP++FTF A+KACS LS + G H V + ++ V ++LIDMY K
Sbjct: 113 FGEMLRSPVVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGK 172
Query: 121 CSCVVNARQVFDKILERD----------------------------------PSEATLVT 146
C+ VV AR VF+ + ++ P+ L +
Sbjct: 173 CNDVVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLAS 232
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
VISA A + L G+ +HG + + + V + LVDMYAKCG + + +F ++
Sbjct: 233 VISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPS 292
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V+ + +MI A +G K+L LFE+M + ++P+HIT VGVL ACS GL +EG +
Sbjct: 293 VIPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLT 352
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPG--VWGALLNSCKLHG 323
SM Y I P +HYTC+VD+L G LD+A DL M V PD +WGALL++ + HG
Sbjct: 353 SMYEKYGIMPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHG 412
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
V +A A ++L+ AG YV LSN+YA A + E KLR M G+ K CSWI
Sbjct: 413 RVDIAAEACQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWI 472
Query: 384 EVKNKAHAFLSGD-ASHPNCDEIYAKLKWLEGRMKEAGYVPGTES-VFHDVENDEKANMI 441
E+K+ ++ F +G+ S P DE+ L+ L+ +MK+ GYV G + VF D+E + + +
Sbjct: 473 EIKDSSYIFYAGEITSCPRGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKV 532
Query: 442 CCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF 501
HSERLA+ FGLI+ P G + I KNL++C DCH A K IS+I ERE VRD+NR+HHF
Sbjct: 533 WLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHF 592
Query: 502 KDGICSCGDYW 512
K+G C+C +W
Sbjct: 593 KNGCCTCNGFW 603
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 7/223 (3%)
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
H + + F N L++ Y + + A LF+++ VVSW +++ GY +G
Sbjct: 47 HSIALKLGFLNNTVNVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQP 106
Query: 224 TKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTC 282
+ AL LF E ++ V P+ TF + ACS G M F + V + ++ +
Sbjct: 107 STALFLFGEMLRSPVVPNDFTFATAIKACSILSNLRHGEM-FHAHVEIFGYGGNIVVCSS 165
Query: 283 MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHD 342
++D+ G + +A + M K + W +++ + + H A + L
Sbjct: 166 LIDMYGKCNDVVKARGVFNSMSCK-NIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEH 224
Query: 343 AGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
Y++ S I A A+ + +L + G S+ C EV
Sbjct: 225 PNPYMLASVISACAS----LGRLVSGKVMHGAAISLGCDSSEV 263
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/485 (37%), Positives = 291/485 (60%), Gaps = 33/485 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T+LV +Y C L +A + DR+P+R++ W +I Y+ + A++L+ ++L G
Sbjct: 47 LGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAG 106
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+P+ +T L +CS +I +G+++H +++ +E+ +FVG++L+DMYAK + AR
Sbjct: 107 CIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEAR 166
Query: 129 QVFDKILERDP---------------------------------SEATLVTVISASADIA 155
+VFD + ERD + T T+++A + +A
Sbjct: 167 RVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLA 226
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+L G+++H R V ++ +L+DMY+KCG + +R +F+ + E+ VVSWNAM+
Sbjct: 227 SLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLM 286
Query: 216 GYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP 275
GY HG + + LF+ + EV+PD +T + VLS CS GGL DEG F+++V++
Sbjct: 287 GYGRHGLGHEVISLFKDLHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALL 346
Query: 276 SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKL 335
HY C++DLLG SGRL++A +LI M + P +WG+LL +C++H +V + EL +KL
Sbjct: 347 HTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKL 406
Query: 336 IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSG 395
+E+EP +AGNYVILSNIYA A W+ V K+RKLM+++ + K SWI + H F S
Sbjct: 407 LEMEPENAGNYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSS 466
Query: 396 DASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLI 455
+ HP+ +I AK+K + +K AG+VP V HDV++++K M+ HSE+LAI FGL+
Sbjct: 467 ERFHPSKKDINAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLM 526
Query: 456 NTPDG 460
NTP G
Sbjct: 527 NTPPG 531
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 144/311 (46%), Gaps = 67/311 (21%)
Query: 79 ALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD 138
A+ AC A+ EGR++H +I ++ VF+G L+ MY +C + +AR V D++ ER
Sbjct: 16 AITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS 75
Query: 139 ---------------------------------PSEATLVTVISASADIAALPQGRELHG 165
P+E TL TV+++ + ++ QG+++H
Sbjct: 76 VVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHS 135
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
+ FE ++ V ++L+DMYAK ++ AR +F+ L E+ VVS A+I+GYA G +
Sbjct: 136 LLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEE 195
Query: 226 ALDLFEKMKDE-VQPDHITFVGVLSACS--------------------------RGGLFD 258
ALDLF ++ E +Q +H+TF +++A S + L D
Sbjct: 196 ALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLID 255
Query: 259 E----GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI--MQMRVKPDPGVW 312
G++ + V D ++ SV + M+ G G E L + VKPD
Sbjct: 256 MYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKEVKPDSVTL 315
Query: 313 GALLNSCKLHG 323
A+L+ C HG
Sbjct: 316 LAVLSGCS-HG 325
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/549 (37%), Positives = 312/549 (56%), Gaps = 39/549 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYA-WNGPYEVAIEL 60
G ++ L+ LY+ D ++ ++F ++P+ + WN I A A + A++
Sbjct: 587 GLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKY 646
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ +++ G P+ TF L A S+ S + G +IH +++ D + AL+ Y K
Sbjct: 647 FLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGK 706
Query: 121 CSCVVNARQVFDKILERDPSEA----------------------------------TLVT 146
C + + +F ++ ER + T T
Sbjct: 707 CEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFAT 766
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V+SA A +A L +G E+H + R E +V V +ALVDMYAKCG + A FE + +
Sbjct: 767 VLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRN 826
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFE 265
+ SWN+MI+GYA HGH KAL +F +MK Q PDH+TFVGVLSACS GL DEG F+
Sbjct: 827 IYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFK 886
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS-CKLHG- 323
SM Y + P ++H++CMVDLLG +G + + D I M + P+ +W +L + C+ +G
Sbjct: 887 SMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGR 946
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
+ +L + A + LIELEP +A NYV+LSN++A NWE V + R M +KK CSW+
Sbjct: 947 NTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWV 1006
Query: 384 EVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICC 443
+K+ H F++GD +HP ++IY KLK L ++++AGYVP T+ +D+E + K ++
Sbjct: 1007 NMKDGVHLFVAGDQTHPEKEKIYEKLKELMNKIRDAGYVPETKYALYDLELENKEELLSY 1066
Query: 444 HSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKD 503
HSE+LAIAF L + + I KNL++C DCH A K+ISKI R+I +RD NR+HHF
Sbjct: 1067 HSEKLAIAFVLTRKSE-LPIRIMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFGG 1125
Query: 504 GICSCGDYW 512
G+CSCGDYW
Sbjct: 1126 GMCSCGDYW 1134
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 168/362 (46%), Gaps = 47/362 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF L+++Y L +A +LFD +PQ+NL W+ LI Y N + A L+
Sbjct: 170 GFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLF 229
Query: 62 YRLLEIGLVPDNFTFPFALKACS--ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
++ GL+P++F AL+AC + I+ G +IH + + +D+ + L+ MY+
Sbjct: 230 KGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYS 289
Query: 120 KCSCVV-NARQVFDKILERD-------------------------------------PSE 141
CS + +A +VFD+I R+ P+E
Sbjct: 290 DCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNE 349
Query: 142 ATLVTVISASADIA--ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF 199
TL ++++A+ +A L ++ + F ++ V +ALV+ +A+ GL+ A+ +F
Sbjct: 350 YTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIF 409
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDE 259
+Q+ ++ V+ N ++ G A +A +F++MKD V+ + + V +LS + E
Sbjct: 410 KQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLKE 469
Query: 260 GRMFFES----MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
G+ + + R +D + +V++ G +D AC + Q+ D W ++
Sbjct: 470 GKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACS-VFQLMPSKDTVSWNSM 528
Query: 316 LN 317
++
Sbjct: 529 IS 530
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 202/456 (44%), Gaps = 68/456 (14%)
Query: 8 VLATKLVHLYSACD-CLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL-- 64
+L+ L+ +YS C + +AH++FD I RN WN +I Y G A +L+ +
Sbjct: 279 ILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQM 338
Query: 65 --LEIGLVPDNFTF-PFALKACS----ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDM 117
+E+ L P+ +T ACS L +E+ + + ++ + D++VG+AL++
Sbjct: 339 EGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQ---MLTRIEKSGFLRDLYVGSALVNG 395
Query: 118 YAKCSCVVNARQVFDKILERDP--------------------------------SEATLV 145
+A+ + A+ +F ++ +R+ + +LV
Sbjct: 396 FARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLV 455
Query: 146 TVISASADIAALPQGR----ELHGFSWRHRF-ELNVKVKTALVDMYAKCGLVKVARNLFE 200
++S + + L +G+ E+H + +R + + + ALV+MY KC + A ++F+
Sbjct: 456 VLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQ 515
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDE 259
+ K VSWN+MI+G + +A+ F MK + + P + + + LS+CS G
Sbjct: 516 LMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTL 575
Query: 260 GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC 319
GR + + +D V ++ L + ++E + QM + D W + + +
Sbjct: 576 GRQIHGEGFK-WGLDLDVSVSNALLTLYAETDSINECQKVFFQMP-EYDQVSWNSFIGAL 633
Query: 320 KLHGHVKLAELALEKLIELEPHDAG---NYVILSNIYARAANWEGVA---KLRKLMIDRG 373
+ L AL+ +E+ AG N V NI A +++ + ++ L++
Sbjct: 634 AKYEASVLQ--ALKYFLEM--MQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYS 689
Query: 374 IKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKL 409
+ A ++N AF +C+ I++++
Sbjct: 690 VADDNA-----IENALLAFYGKCEQMEDCEIIFSRM 720
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 159/356 (44%), Gaps = 42/356 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + LV+ ++ + A +F ++ RN N L+ A E A +++
Sbjct: 381 GFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVF 440
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRR----IHEDVIRNKW-ETDVFVGAALID 116
+ ++ + ++ + L + S ++EG+R +H + R+ + + +G AL++
Sbjct: 441 KEMKDLVEI-NSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVN 499
Query: 117 MYAKCSCVVNARQVFDKILERD---------------------------------PSEAT 143
MY KC+ + NA VF + +D PS +
Sbjct: 500 MYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFS 559
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
+++ +S+ + + L GR++HG ++ +L+V V AL+ +YA+ + + +F Q+
Sbjct: 560 VISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMP 619
Query: 204 EKRVVSWNAMITGYAMHGHST-KALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGR 261
E VSWN+ I A + S +AL F E M+ +P+ +TF+ +L+A S + G
Sbjct: 620 EYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGH 679
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
+++ Y + ++ G ++++ + +M + D W ++++
Sbjct: 680 Q-IHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMIS 734
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
++L LH ++ F +V L+++Y + G + AR LF+++ +K +VSW+ +I
Sbjct: 154 SSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLI 213
Query: 215 TGYAMHGHSTKALDLFEK-MKDEVQPDHITFVGVLSACSRGG 255
+GY + +A LF+ + + P+H L AC + G
Sbjct: 214 SGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCG 255
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/537 (38%), Positives = 309/537 (57%), Gaps = 37/537 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V T ++ Y L A LFD +P+RN+ W ++ YA NG +VA +L+ + E
Sbjct: 180 VAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPER 239
Query: 68 GLVP-----DNFTFPFALKACSAL----------------------SAIEEGRRIHEDVI 100
V +T ++ S+L +++ RR V
Sbjct: 240 NEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARR----VF 295
Query: 101 RNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP---SEATLVTVISASADIAAL 157
+ E D +A+I +Y + + A +F + ++R+ + +L++V+S +A+L
Sbjct: 296 KGMKERDNGTWSAMIKVYERKGYELEALGLFRR-MQREGLALNFPSLISVLSVCVSLASL 354
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
G+++H R F+ ++ V + L+ MY KCG + A+ +F + K VV WN+MITGY
Sbjct: 355 DHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGY 414
Query: 218 AMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
+ HG +AL++F M V PD +TF+GVLSACS G EG FE+M Y ++P
Sbjct: 415 SQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPG 474
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
++HY C+VDLLG + +++EA L+ +M ++PD VWGALL +C+ H + LAE+A+EKL
Sbjct: 475 IEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLA 534
Query: 337 ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGD 396
+LEP +AG YV+LSN+YA W V LR+ + R + K CSWIEV+ K H F GD
Sbjct: 535 QLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGD 594
Query: 397 A-SHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLI 455
+ HP I L+ L G ++EAGY P V HDV+ +EK + + HSE+LA+A+GL+
Sbjct: 595 SKGHPEQPIIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLL 654
Query: 456 NTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
P+G + + KNL++C DCH AIK I+K+T REI +RD NR+HHFKDG CSC DYW
Sbjct: 655 KVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGHCSCKDYW 711
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 145/338 (42%), Gaps = 43/338 (12%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L A ++FD +P RN+ W ++R Y NG A L++ + +V ++ L
Sbjct: 102 LSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVV----SWTVMLGG 157
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEA 142
+++ R++ + + E DV +I Y + + AR +FD++ +R+
Sbjct: 158 LLQEGRVDDARKLFDMMP----EKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNV--V 211
Query: 143 TLVTVISASA-----DIA-----ALPQGRE------LHGFSWRHRFE--------LNVKV 178
T ++S A D+A +P+ E L G++ R + VK
Sbjct: 212 TWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKP 271
Query: 179 KTALVDMYAKCGL---VKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD 235
+M GL V AR +F+ ++E+ +W+AMI Y G+ +AL LF +M+
Sbjct: 272 VVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQR 331
Query: 236 E-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLD 294
E + + + + VLS C D G+ +VR D + + ++ + G L
Sbjct: 332 EGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRS-EFDQDLYVASVLITMYVKCGNLV 390
Query: 295 EACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
A + + +K D +W +++ HG L E AL
Sbjct: 391 RAKQVFNRFPLK-DVVMWNSMITGYSQHG---LGEEAL 424
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 27/244 (11%)
Query: 29 LFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSA 88
LF+++PQRN WN LI + NG A ++ + + +V ++ ++
Sbjct: 77 LFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVV----SWTSMVRGYVRNGD 132
Query: 89 IEEGRRI-----HEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEAT 143
+ E R+ H++V+ W V +G L + V +AR++FD + E+D T
Sbjct: 133 VAEAERLFWHMPHKNVV--SW--TVMLGGLLQE-----GRVDDARKLFDMMPEKDVVAVT 183
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
+I + L + R L + + NV TA+V YA+ G V VAR LFE +
Sbjct: 184 --NMIGGYCEEGRLDEARAL----FDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMP 237
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMF 263
E+ VSW AM+ GY G +A LF+ M V+P + ++ G D+ R
Sbjct: 238 ERNEVSWTAMLLGYTHSGRMREASSLFDAMP--VKPV-VVCNEMIMGFGLNGEVDKARRV 294
Query: 264 FESM 267
F+ M
Sbjct: 295 FKGM 298
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 135/342 (39%), Gaps = 61/342 (17%)
Query: 17 YSACDCLHNAHQLFDR--IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNF 74
Y+ L +A ++FD +P R + WN ++ AY A+ L+ ++ + V N
Sbjct: 32 YARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQRNTVSWN- 90
Query: 75 TFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI 134
LI + K + AR+VFD +
Sbjct: 91 --------------------------------------GLISGHIKNGMLSEARRVFDTM 112
Query: 135 LERD-PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVK 193
+R+ S ++V + D+A E W H NV T ++ + G V
Sbjct: 113 PDRNVVSWTSMVRGYVRNGDVA------EAERLFW-HMPHKNVVSWTVMLGGLLQEGRVD 165
Query: 194 VARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSR 253
AR LF+ + EK VV+ MI GY G +A LF++M + +T+ ++S +R
Sbjct: 166 DARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKR---NVVTWTAMVSGYAR 222
Query: 254 GGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWG 313
G D R FE M + +T M+ HSGR+ EA L M VKP V
Sbjct: 223 NGKVDVARKLFEVMPERNEVS-----WTAMLLGYTHSGRMREASSLFDAMPVKPVV-VCN 276
Query: 314 ALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYAR 355
++ L+G V A + + E D G + + +Y R
Sbjct: 277 EMIMGFGLNGEVDKARRVFKGMKE---RDNGTWSAMIKVYER 315
>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Brachypodium distachyon]
Length = 682
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/545 (36%), Positives = 316/545 (57%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G HP + ++H+Y C + +A ++F+ + ++F +N +I + G ++ +I +
Sbjct: 138 GLQEHPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIV 197
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ D+ ++ L C++ + G ++H ++ + E +V+VG+AL+DMY KC
Sbjct: 198 RSMVGEVEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKC 257
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
C +A F+ + E++ P+E T +
Sbjct: 258 DCARDAHSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVAL 317
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
++ A +AAL G L + + + V AL++MY+K G + A +F + + VV
Sbjct: 318 NSCAGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVV 377
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWN++I GYA HG + +A+ +F M E+ P ++TFVGVL AC++ GL DEG + M
Sbjct: 378 SWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIM 437
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+++ I P +HYTCMV LL +GRLDEA I+ + D W +LL+SC+++ + L
Sbjct: 438 MKEMGIKPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGL 497
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E++++L+P+D G YV+LSN+YA+A W+GV K+RKLM +RG++K SWI+V +
Sbjct: 498 GHRVAEQILQLKPNDVGTYVLLSNMYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGS 557
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ H F S D +H ++I KLK L G++K GYVP V HDVE ++K + HSE+
Sbjct: 558 EVHVFTSEDKNHKWINQITIKLKELIGQIKVIGYVPNCAVVLHDVEAEQKEEHLMYHSEK 617
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
+A+AFGLI++P+G + I KNL+ICDDCH+AIK IS +T R+I VRD R+H DG+CS
Sbjct: 618 MALAFGLIHSPEGETIRIMKNLRICDDCHVAIKLISVVTRRKIVVRDTVRFHCIDDGVCS 677
Query: 508 CGDYW 512
C DYW
Sbjct: 678 CDDYW 682
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 176/411 (42%), Gaps = 49/411 (11%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
F + L+ Y C L A Q+FD +P RN N+L+ YA G + A+ L L
Sbjct: 43 FDVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYASAGRHSDALAL---L 99
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
+ + AL A + + + GR+ H +++ + +V A++ MY +C+ V
Sbjct: 100 KAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYVCNAVLHMYCQCAHV 159
Query: 125 VNARQVFDKIL------------------ERDPS---------------EATLVTVISAS 151
+A +VF+ + E D S + V V+
Sbjct: 160 EDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVEQWDHVSYVAVLGHC 219
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
A L G ++H + + R E NV V +ALVDMY KC + A + FE L EK VVSW
Sbjct: 220 ASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSWT 279
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
A++T Y + AL LF ++ E V+P+ T+ L++C+ G S ++
Sbjct: 280 AVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKT 339
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
H ++ ++++ SG + +A + + M + D W +++ HG + A
Sbjct: 340 GHWG-ALSVCNALMNMYSKSGSIHDAWRVFLSMPWR-DVVSWNSVIIGYAHHGLAREAMC 397
Query: 331 ALEKLI--ELEPHDAGNYVILSNIYARAANW----EGVAKLRKLMIDRGIK 375
++ E+ P +YV + A EG+ L +M + GIK
Sbjct: 398 VFHDMLLAEIVP----SYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIK 444
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 127/282 (45%), Gaps = 43/282 (15%)
Query: 92 GRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP------------ 139
G+ IH +IR DV LI Y KC + ARQ+FD + R+
Sbjct: 30 GKAIHAQMIRAA-HFDVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYAS 88
Query: 140 ------------------SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
+E L T +SA+A + + GR+ HG++ + + + V A
Sbjct: 89 AGRHSDALALLKAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYVCNA 148
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEV-QPD 240
++ MY +C V+ A +FE + + ++N+MI G+ G ++ + M EV Q D
Sbjct: 149 VLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVEQWD 208
Query: 241 HITFVGVLSAC-SRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
H+++V VL C S L ++ +++ R ++ +V + +VD+ G+ D A D
Sbjct: 209 HVSYVAVLGHCASTKELLLGCQVHAQALKR--RLEQNVYVGSALVDMY---GKCDCARDA 263
Query: 300 IMQMRVKPDPGV--WGALLNSCKLHGHVKLAELALEKLIELE 339
V P+ V W A++ + + + E AL+ ++LE
Sbjct: 264 HSAFEVLPEKNVVSWTAVMTA---YTQNERFEDALQLFLDLE 302
>gi|297743669|emb|CBI36552.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/591 (36%), Positives = 307/591 (51%), Gaps = 80/591 (13%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + + +V Y + A ++FD + +R+ LWN ++ N ++ AI ++
Sbjct: 136 GFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIF 195
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+++ G+ D+ T L + L + G I ++ + + +V L +Y+KC
Sbjct: 196 GDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKC 255
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ AR +F +I + D + +++V +I
Sbjct: 256 GEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLI 315
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
L R +HGF + N V TAL +Y++ ++ AR LF++ EK +
Sbjct: 316 PVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLA 375
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMK---------------------------------- 234
SWNAMI+GYA +G + KA+ LF++M+
Sbjct: 376 SWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLI 435
Query: 235 -------------DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYT 281
V P +TF+ VL ACS GL EG F SMV D+ +P +HY
Sbjct: 436 NRESFESNIFMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYA 495
Query: 282 CMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPH 341
CMVDLLG +G LD+A D I +M V+P P VWGALL +C +H LA LA +KL EL+P
Sbjct: 496 CMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQ 555
Query: 342 DAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPN 401
+ G YV+LSNIY+ N+ A +R ++ R + K+ C+ IEV N H F SGD SHP
Sbjct: 556 NVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQ 615
Query: 402 CDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGT 461
IYA L+ L G+M+EAG+ T + HDVE +EK M+ HSE+LAIAFGLI + GT
Sbjct: 616 ATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLITSEPGT 675
Query: 462 RLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ I KNL++C DCH A KFISKITER I VRD NR+HHFKDGICSCGDYW
Sbjct: 676 EIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 726
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 183/430 (42%), Gaps = 86/430 (20%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE- 66
V TKL H S + A LF IP +LFL+NVLIRA++ N A+ LY L +
Sbjct: 43 VTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKS 102
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
L PDNFT+ F + S+L I + +D+FVG+A++ Y K S V
Sbjct: 103 TPLEPDNFTYAFVISGASSLGLGLLLHAHS---IVAGFGSDLFVGSAIVACYFKFSRVAA 159
Query: 127 ARQVFDKILERDP---------------------------------SEATLVTVISASAD 153
AR+VFD +LERD T+ V+ A+
Sbjct: 160 ARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAE 219
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+ L G + + + F + V T L +Y+KCG ++ AR LF Q+ + +VS+NAM
Sbjct: 220 LQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAM 279
Query: 214 ITGYAMHGHSTKALDLFEKM---KDEVQPDHITFVGV-----------LSAC-------- 251
I+GY + + ++ LF+++ ++V I VG+ L+ C
Sbjct: 280 ISGYTCNNETESSVRLFKELLVSGEKVNSSSI--VGLIPVFFPFGHLHLTRCIHGFCTKS 337
Query: 252 ----------------SRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
SR + R+ F D + S+ + M+ +G ++
Sbjct: 338 GVVSNSSVSTALTTVYSRLNEIESARLLF-----DESSEKSLASWNAMISGYAQNGLTEK 392
Query: 296 ACDLIMQMR---VKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNI 352
A L +M+ V+P+P ++L++C G + L + + LI E ++ +++ S +
Sbjct: 393 AISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKW-VHDLINRESFESNIFMLHSRV 451
Query: 353 YARAANWEGV 362
+ V
Sbjct: 452 SPTGVTFLSV 461
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 146/369 (39%), Gaps = 70/369 (18%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF H + T L LYS C + A LF +I Q +L +N +I Y N E ++ L
Sbjct: 236 VGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRL 295
Query: 61 YYRLLE----------IGLVPDNFTFPFA---LKAC------------------------ 83
+ LL +GL+P FPF L C
Sbjct: 296 FKELLVSGEKVNSSSIVGLIP--VFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVY 353
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI--LERDPSE 141
S L+ IE R + ++ E + A+I YA+ A +F ++ E P+
Sbjct: 354 SRLNEIESARLLFDE----SSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNP 409
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV---------KTALVDMYA--KCG 190
T+ +++SA A + AL G+ +H R FE N+ + T L +YA G
Sbjct: 410 VTVTSILSACAQLGALSLGKWVHDLINRESFESNIFMLHSRVSPTGVTFLSVLYACSHAG 469
Query: 191 LVKVARNLFEQLR-----EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFV 245
LV+ +F + E + M+ G+ KALD KM V+P +
Sbjct: 470 LVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMP--VEPGPPVWG 527
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDP-SVQHYTCMVDLLGHSGRLDEACD---LIM 301
+L AC + R+ + + + +DP +V +Y + ++ EA ++
Sbjct: 528 ALLGACMIHKDANLARLASDKL---FELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVK 584
Query: 302 QMRVKPDPG 310
+ ++ PG
Sbjct: 585 RRKLAKTPG 593
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/545 (37%), Positives = 307/545 (56%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G G V+AT LV+ Y+ C + A + F +P+RN W +I A+A G + +A+E +
Sbjct: 262 GLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIG-HLLAVETF 320
Query: 62 YRLLEIGLVPDNFTFPFALKACSAL------SAIEEGRRIHEDVI--------------- 100
+ +L G+VP T AL+ C L AI + + DV
Sbjct: 321 HAMLLEGVVPTRSTLFAALEGCEDLHTARLVEAIAQEIGVATDVAIVTDLVMAYARCDGQ 380
Query: 101 ---------RNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER--DPSEATLVTVIS 149
R + E D + A+I +YA+C + +++ +ER P +T +
Sbjct: 381 EDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALD 440
Query: 150 ASADIAALPQGRELHG-FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A A +AAL +GR++H + R + +V + A+V MY +CG ++ AR+ F+ + + +
Sbjct: 441 ACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEI 500
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNAM++ A HG DLF M E + + F+ +LSAC+ GL + G F +M
Sbjct: 501 SWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHAGLVEAGCEHFSAM 560
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
D+ + P+ +HY CMVDLLG GRL +A ++ M V PD W AL+ +C+++G +
Sbjct: 561 TGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTER 620
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
A E+++EL + YV L NIY+ A WE A +RK+M D G++K S IE+++
Sbjct: 621 GRFAAERVLELRANHTAAYVALCNIYSAAGRWEDAAAVRKIMADLGLRKIPGVSSIEIRS 680
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K H F+ D SHP + IYA+L+ + G ++ AGY T V HDVE ++K ++ HSE+
Sbjct: 681 KVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEK 740
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFG+++TP G+ L + KNL++C DCH A KFISK+ REI VRDV R+HHFKDG CS
Sbjct: 741 LAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACS 800
Query: 508 CGDYW 512
CGDYW
Sbjct: 801 CGDYW 805
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 155/366 (42%), Gaps = 48/366 (13%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQR-NLFLWNVLIRAYAWNGPYEVAIEL 60
G G ++A+ LV +Y C L +A+ LF + + ++ LWN +I A + NG A+E+
Sbjct: 158 GLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEI 217
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEG--RRIHEDVIRNKWETDVFVGAALIDMY 118
+YR+L++G+ PD TF KACS+ ++ + H + +DV V AL++ Y
Sbjct: 218 FYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAY 277
Query: 119 AKCSCVVNARQVFDKILERD--------------------------------PSEATLVT 146
A+C + AR+ F + ER+ P+ +TL
Sbjct: 278 ARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGHLLAVETFHAMLLEGVVPTRSTLFA 337
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+ D L R + + +V + T LV YA+C + A +F E
Sbjct: 338 ALEGCED---LHTARLVEAIAQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFSAREEG- 393
Query: 207 VVSWN-----AMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEG 260
W+ AMI YA L+ ++ + PD I ++ L AC+ EG
Sbjct: 394 --EWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEG 451
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
R + D +D V +V + G G L +A D M + D W A+L++
Sbjct: 452 RQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPAR-DEISWNAMLSASA 510
Query: 321 LHGHVK 326
HG V+
Sbjct: 511 QHGRVE 516
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 125/281 (44%), Gaps = 40/281 (14%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
LA+ LV++Y C L +A +F +I +++ LW VLI AY G AI L++R+L+ G
Sbjct: 64 LASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEG 123
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D F L ACS+ + GR IH + V +AL+ MY +C + +A
Sbjct: 124 IALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDAN 183
Query: 129 QVFDKILER------------------DPSEAT--------------LVTVISASADIAA 156
+F LER P EA LVT +S ++
Sbjct: 184 ALFGH-LERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSS 242
Query: 157 LPQGR--ELHGFSW---RHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
P R ++ GF +V V TALV+ YA+CG + AR F + E+ VSW
Sbjct: 243 SPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWT 302
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSAC 251
+MI +A GH A++ F M E V P T L C
Sbjct: 303 SMIAAFAQIGH-LLAVETFHAMLLEGVVPTRSTLFAALEGC 342
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 117/267 (43%), Gaps = 37/267 (13%)
Query: 107 DVFVGAALIDMYAKCSCVVNARQVFDKI---------------LERDPSEATL------- 144
D ++ ++L+ MY +C + +A VF KI + R S A +
Sbjct: 61 DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120
Query: 145 -----------VTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVK 193
V+V+SA + L GR +H + L V +ALV MY +CG ++
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLR 180
Query: 194 VARNLFEQL-REKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSAC 251
A LF L R VV WNAMIT + +G +AL++F +M + + PD +TFV V AC
Sbjct: 181 DANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKAC 240
Query: 252 SRGGLFDEGRM-FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPG 310
S ++ F + + + + V T +V+ G +D A + M + +
Sbjct: 241 SSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPER-NAV 299
Query: 311 VWGALLNSCKLHGHVKLAELALEKLIE 337
W +++ + GH+ E L+E
Sbjct: 300 SWTSMIAAFAQIGHLLAVETFHAMLLE 326
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 3/172 (1%)
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE- 236
+ ++LV MY +CG ++ A ++F ++ K +V W +I+ Y GHS A+ LF ++ E
Sbjct: 64 LASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEG 123
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+ D I FV VLSACS GR+ V + + + +V + G G L +A
Sbjct: 124 IALDAIVFVSVLSACSSEEFLAAGRLIHRCAV-EAGLGLQEIVASALVSMYGRCGSLRDA 182
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE-PHDAGNYV 347
L + D +W A++ + +G + A ++++L P D +V
Sbjct: 183 NALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFV 234
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/533 (37%), Positives = 308/533 (57%), Gaps = 42/533 (7%)
Query: 14 VHLYSACDCLHNAHQ---LFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI--G 68
V L AC N Q +F + N+F N ++A A N + AI+ + +
Sbjct: 28 VKLIGACADHANVRQAALIFAHLASPNIFAHNATLKALAQNSHWFHAIQFFNHQVSSPNA 87
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
PD FTF LKAC+ L+ + G++IH V + +E+++FV +LIDMY K ++ AR
Sbjct: 88 PNPDEFTFTSVLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLLLAR 147
Query: 129 QVFDKILERD------------------------------------PSEATLVTVISASA 152
+FD++ RD P++ TLV+V+ A A
Sbjct: 148 HLFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACA 207
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+ AL G+ + GF R L + + AL DMYAKCG + AR +F ++ E+ V+SW+
Sbjct: 208 HLGALDLGKWIDGFISRREMALGLFLGNALADMYAKCGCITEARRVFNKMEERDVISWSI 267
Query: 213 MITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
+I G AM+GH+ +A F +M D +P+ + F+G+L+AC+ GL +G F +M ++Y
Sbjct: 268 IICGLAMYGHADEAFGCFYEMLDCGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEY 327
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELA 331
+ P V+HY C+VDLL +G LD+A D+I M +KP+ +WGALL C+++ +
Sbjct: 328 GVSPKVEHYGCVVDLLSRAGELDKAEDMISSMPMKPNVIIWGALLGGCRIYRDSGRGQRV 387
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHA 391
++ ++EL+ +G+YV L+N+Y+ + AK R M + G+ K+ CSWIEV N H
Sbjct: 388 VQHILELDSDHSGSYVYLANVYSSMGRLDDAAKCRLRMRENGVLKTPGCSWIEVDNTVHE 447
Query: 392 FLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIA 451
F GD SHP ++IY+ ++ L +MK AGY P T+ V H ++ +EK + + HSE+LAIA
Sbjct: 448 FFMGDLSHPESNKIYSMIRELMWKMKLAGYKPKTDLVVHSIDEEEKEDALSIHSEKLAIA 507
Query: 452 FGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
FGLI+T +GT + + KNL+IC+DCH A K IS I +REI VRD +R+HHFKDG
Sbjct: 508 FGLISTSEGTTIRVVKNLRICNDCHDAAKIISGIVKREIIVRDRSRFHHFKDG 560
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 147/329 (44%), Gaps = 35/329 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDR--IPQRNLFLWNVLIRAYAWNGPYEVAIE 59
GF + + L+ +Y L A LFD + RN+ WN +I YA N Y AIE
Sbjct: 122 GFESNLFVRNSLIDMYFKAGYLLLARHLFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIE 181
Query: 60 LYYRLLEIG-LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
++ + + G +VP++ T L AC+ L A++ G+ I + R + +F+G AL DMY
Sbjct: 182 VFRMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGFISRREMALGLFLGNALADMY 241
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQ-GRELHGFSWRHRF----- 172
AKC C+ AR+VF+K+ ERD VIS S I L G F +
Sbjct: 242 AKCGCITEARRVFNKMEERD--------VISWSIIICGLAMYGHADEAFGCFYEMLDCGE 293
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS-----WNAMITGYAMHGHSTKAL 227
+ N V L+ GLVK N F + ++ VS + ++ + G KA
Sbjct: 294 KPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGELDKAE 353
Query: 228 DLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQH---YTCMV 284
D+ M ++P+ I + +L C D GR V + ++ H Y +
Sbjct: 354 DMISSMP--MKPNVIIWGALLGGCRI--YRDSGR---GQRVVQHILELDSDHSGSYVYLA 406
Query: 285 DLLGHSGRLDEACDLIMQMR---VKPDPG 310
++ GRLD+A ++MR V PG
Sbjct: 407 NVYSSMGRLDDAAKCRLRMRENGVLKTPG 435
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/538 (38%), Positives = 308/538 (57%), Gaps = 37/538 (6%)
Query: 11 TKLVHLYS-ACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
+KL+ LY+ + L A F +I + WN +IR + + A Y ++
Sbjct: 42 SKLLELYALSLGNLSFAILTFSQIRTPSTNDWNAIIRGFIQSPNPTNAFAWYKSMISKSR 101
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
D T F LKAC+ + A E +IH ++R + D +G L+D+YAK + +A +
Sbjct: 102 KVDALTCSFVLKACARVLARLESIQIHTHIVRKGFIADALLGTTLLDVYAKVGEIDSAEK 161
Query: 130 VFDKILERD---------------------------------PSEATLVTVISASADIAA 156
VFD++++RD P+E +++ +SA A +
Sbjct: 162 VFDEMVKRDIASWNALISGFAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGD 221
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-EKRVVSWNAMIT 215
+G ++HG+ RF++N +V ++DMYAKCG V A +FE + K +V+WN MI
Sbjct: 222 FKEGEKIHGYIKVERFDMNAQVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIM 281
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
+AMHG KAL+LFEKM + V PD ++++ VL AC+ GGL +EG F SM + +
Sbjct: 282 AFAMHGEGCKALELFEKMDQSGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSM-ENCGVK 340
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P+V+HY +VDLLG +GRL EA D++ M PD +W LL + + H +V++AE K
Sbjct: 341 PNVKHYGSVVDLLGRAGRLHEAYDIVNSMPTVPDIVLWQTLLGASRTHRNVEIAETVSRK 400
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L+E+ + G++V+LSN+YA W V ++R+ M +R +KK S+IE H F +
Sbjct: 401 LVEMGSNHCGDFVLLSNVYAARERWADVGRVREAMKNRDVKKVPGLSYIEGNGVIHKFYN 460
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
D SH + EIYAKL + R+KE GYV T V HD+ ++K N++ HSE+LA+AFGL
Sbjct: 461 ADKSHESWREIYAKLDEIRFRVKEYGYVAETSFVLHDIGEEDKENVLGHHSEKLAVAFGL 520
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I+T +GT + + KNL+IC DCH IK ISKI +REI VRD R+H FK+G CSC DYW
Sbjct: 521 ISTSEGTPIQVIKNLRICGDCHFVIKLISKIYDREIIVRDRVRFHRFKEGFCSCRDYW 578
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/545 (37%), Positives = 308/545 (56%), Gaps = 46/545 (8%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLF--LWNVLIRAYAWNGPYEVAIELYYR 63
P + T L+ +Y C + +A ++F+ P + +N LI Y N A ++ R
Sbjct: 84 EPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMFRR 143
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
+ E G+ D+ T + C+ + GR +H + ++ ++V V + I MY KC
Sbjct: 144 MKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGS 203
Query: 124 VVNARQVFDKILERD---------------------------------PSEATLVTVISA 150
V + R++FD++ + P TLV+V+S+
Sbjct: 204 VESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSS 263
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
A + A G+E+ + F NV + AL+ MYA+CG + AR +F+ + K +VSW
Sbjct: 264 CAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSW 323
Query: 211 NAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
AMI Y MHG L LF+ M K ++PD FV VLSACS GL D+G F +M R
Sbjct: 324 TAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKR 383
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+Y ++P +HY+C+VDLLG +GRLDEA + I M V+PD VWGALL +CK+H +V +AE
Sbjct: 384 EYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAE 443
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
LA K+IE EP + G YV++SNIY+ + N EG+ ++R +M +R +K S++E K K
Sbjct: 444 LAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGKV 503
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKE-AGYVPGTESVFHDVENDEKANMICC-HSER 447
H FL+GD SH +E++ L LE + E AG + D + E+ + HSER
Sbjct: 504 HLFLAGDRSHEQTEEVHRMLDELETSVMELAGNM--------DCDRGEEVSSTTREHSER 555
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFG++N+ GT +L+ KNL++C+DCH+ IK +SKI +R VRD +R+H+FKDG+CS
Sbjct: 556 LAIAFGILNSIPGTEILVIKNLRVCEDCHVFIKLVSKIVDRRFVVRDASRFHYFKDGVCS 615
Query: 508 CGDYW 512
C DYW
Sbjct: 616 CKDYW 620
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 166/352 (47%), Gaps = 48/352 (13%)
Query: 41 WNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVI 100
WNV +R A+ + +I LY +L G PD F+FPF LK+C++LS G+++H VI
Sbjct: 18 WNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVI 77
Query: 101 RNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATL----------VTVISA 150
R E + FV ALI MY KC V +AR+VF E +P + L T S
Sbjct: 78 RGGCEAEPFVLTALISMYCKCGLVEDARKVF----EENPHSSQLGVCYNALISGYTANSK 133
Query: 151 SADIA-------------------------ALPQ----GRELHGFSWRHRFELNVKVKTA 181
+D A +P+ GR LHG + V V +
Sbjct: 134 VSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNS 193
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPD 240
+ MY KCG V+ R LF+++ K +++WNA+I+GY+ +G + L+LFE+MK V PD
Sbjct: 194 FITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPD 253
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
T V VLS+C+ G G+ E +V P+V ++ + G L +A +
Sbjct: 254 PFTLVSVLSSCAHLGAKKIGQEVGE-LVEANGFAPNVFLSNALISMYARCGNLAKARAVF 312
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHDAGNYVILS 350
M VK W A++ +HG + + +I+ + P A ++LS
Sbjct: 313 DIMPVKSLVS-WTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLS 363
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+ L+ +Y+ C L A +FD +P ++L W +I Y +G E + L+
Sbjct: 284 GFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLF 343
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN-KWETDVFVGAALIDMYAK 120
+++ G+ PD F L ACS ++G + + R K E + L+D+ +
Sbjct: 344 DDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGR 403
Query: 121 CSCVVNARQVFDKI 134
+ A + D +
Sbjct: 404 AGRLDEAMEFIDSM 417
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 215/580 (37%), Positives = 306/580 (52%), Gaps = 78/580 (13%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-- 65
+A +L Y+A L A L R P + I A++ G + A+ L +L
Sbjct: 57 AVAFRLQRAYAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRGLHRAALALLSEMLLS 116
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY------- 118
GL+P T +L AC L+ GR +H ++ + +V AL+ MY
Sbjct: 117 RHGLLPTAHTLSASLPACGCLAV---GRALHGYAVKLALSGEPYVATALLGMYARAGEAA 173
Query: 119 -------------------------AKCSCVVNARQVFDKILERD--------------- 138
AK + +AR +FD + +D
Sbjct: 174 AARALFDGMRPDPHVVSVTAMLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHG 233
Query: 139 ------------------PSEATLVTVISASADIAALPQGRELHGF----SWRHRFELNV 176
P E ++V +SA A + GR LH F R R LN
Sbjct: 234 RPSEALRLFRQMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNA 293
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLR---EKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
+V TALVDMY KCG ++ A +F L ++ VV+WNAMI GYAMHG S +AL+ F ++
Sbjct: 294 RVGTALVDMYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQL 353
Query: 234 KDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGR 292
+ + + P ITF+GVL+ACS GL DEGR F +M +Y I P V+HY CMVDLLG +GR
Sbjct: 354 RAQGLWPTDITFIGVLNACSHSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGR 413
Query: 293 LDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNI 352
++EA DL+ M+ KPD +W +LL +C+LH ++ L + + L+ ++G YV+LSN+
Sbjct: 414 VEEAFDLVQSMKAKPDAAMWASLLGACRLHKNLALGQRVADYLVGNGLANSGTYVLLSNM 473
Query: 353 YARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWL 412
YA A W V ++R +M G++K CS +EV + F++GD SHP EIYAKL+ +
Sbjct: 474 YAAAGKWREVGRVRSMMRASGVQKEPGCSAVEVGRRVVEFVAGDRSHPRSAEIYAKLEEV 533
Query: 413 EGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKIC 472
+ G+VP TE V HD+++ K + HSE+LA+AFGLI+TP T + I KNL+ C
Sbjct: 534 NSIARARGHVPHTELVLHDLDDAAKERALAVHSEKLALAFGLISTPPRTGIKIVKNLRAC 593
Query: 473 DDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
DCH +K +S+ T R+I RD NR+HHF DG CSCGDYW
Sbjct: 594 ADCHAVLKLVSEATGRKIVFRDRNRFHHFVDGSCSCGDYW 633
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/538 (36%), Positives = 304/538 (56%), Gaps = 54/538 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T L+ +Y CL +A +LFDR+ +R++ W V+I + + + + R+LE
Sbjct: 228 MTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEK 287
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L P+ T + C + ++ G+ H ++RN + + + ALIDMY KC V AR
Sbjct: 288 LFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYAR 347
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+F+ + ++D P+ T+V+++S A+
Sbjct: 348 ALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAG 407
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL G+ H + RH E++V ++TAL++MYAKCG V +AR+LF + ++ + WN M+
Sbjct: 408 ALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMA 467
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G++MHG +AL+LF +M+ V+P+ ITFV + ACS GL
Sbjct: 468 GFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGL------------------ 509
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
++HY C+VDLLG +G LDEA ++I M ++P+ +WGALL +CKLH ++ L E+A K
Sbjct: 510 --MEHYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARK 567
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
++EL+P + G V+ SNIYA A W V +R+ M G+KK SWIEV H F S
Sbjct: 568 ILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKS 627
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD + ++Y + + +++E+GY P T +V +++ +EK + + HSE+LA AFGL
Sbjct: 628 GDKACTQTTKVYEMVTEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYHSEKLATAFGL 687
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I+T GT + I KNL+ICDDCH A K +SKI R I VRD NR+HHF +G CSC YW
Sbjct: 688 ISTAPGTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 745
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 182/376 (48%), Gaps = 41/376 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+++Y C CL +A +FD++P+R++ W ++ Y + + A+ L
Sbjct: 118 GFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLV 177
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWE--TDVFVGAALIDMYA 119
+ +G+ + L ++ GR +H ++RN + +V + ALIDMY
Sbjct: 178 REMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYC 237
Query: 120 KCSCVVNARQVFDKILERD---------------------------------PSEATLVT 146
K C+ +A+++FD++ +R P+E TL++
Sbjct: 238 KGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLS 297
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+I+ + L G+ H + R+ F +++ + TAL+DMY KCG V AR LF +++K
Sbjct: 298 LITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKD 357
Query: 207 VVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V W+ +I+ YA + +LF E + ++V+P+++T V +LS C+ G D G+ +
Sbjct: 358 VKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGK-WTH 416
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
+ + + ++ V T ++++ G + A L + ++ D +W ++ +HG
Sbjct: 417 AYINRHGLEVDVILETALINMYAKCGDVTIARSLFNE-AMQRDIRMWNTMMAGFSMHG-- 473
Query: 326 KLAELALEKLIELEPH 341
+ ALE E+E H
Sbjct: 474 -CGKEALELFSEMESH 488
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 171/360 (47%), Gaps = 48/360 (13%)
Query: 23 LHNAHQLFDR---IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP-DNFTFPF 78
HN H F + P+ N +N+LI +Y N + + Y + DNF P
Sbjct: 37 FHNPHPFFSQSHFTPEAN---YNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPS 93
Query: 79 ALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD 138
LKAC+ S+ + GR +H +N + +DVFV AL++MY KC C+V+AR VFD++ ERD
Sbjct: 94 LLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERD 153
Query: 139 P---------------------------------SEATLVTVISASADIAALPQGRELHG 165
S L+++I+ ++ + GR +HG
Sbjct: 154 VVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHG 213
Query: 166 FSWRHRFE--LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
+ R+ + + V + TAL+DMY K G + A+ LF++L ++ VVSW MI G
Sbjct: 214 YIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRL 273
Query: 224 TKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTC 282
+ F +M +E + P+ IT + +++ C G D G+ F ++R+ S+ T
Sbjct: 274 DEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRN-GFGMSLALVTA 332
Query: 283 MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHD 342
++D+ G G++ A L ++ K D +W L+++ + HV + +E+ +D
Sbjct: 333 LIDMYGKCGQVGYARALFNGVK-KKDVKIWSVLISA---YAHVSCMDQVFNLFVEMLNND 388
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 109/236 (46%), Gaps = 19/236 (8%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG L T L+ +Y C + A LF+ + ++++ +W+VLI AYA + L+
Sbjct: 322 GFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLF 381
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+L + P+N T L C+ A++ G+ H + R+ E DV + ALI+MYAKC
Sbjct: 382 VEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKC 441
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELN----VK 177
V AR +F++ ++RD T+++ + + EL H E N V
Sbjct: 442 GDVTIARSLFNEAMQRDIRMWN--TMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVS 499
Query: 178 VKTA------------LVDMYAKCGLVKVARNLFEQLREK-RVVSWNAMITGYAMH 220
+ A LVD+ + G + A N+ E + + + W A++ +H
Sbjct: 500 IFHACSHSGLMEHYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLH 555
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 22/164 (13%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+L T L+++Y+ C + A LF+ QR++ +WN ++ ++ +G + A+EL+ +
Sbjct: 429 ILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESH 488
Query: 68 GLVPDNFTFPFALKACSALSAIEE--------GRRIHEDVIRNKWET-----DVFVGAAL 114
G+ P++ TF ACS +E GR H D N E + + AL
Sbjct: 489 GVEPNDITFVSIFHACSHSGLMEHYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGAL 548
Query: 115 IDMYAKCSCVVN---ARQVFDKILERDPSE---ATLVTVISASA 152
+ A C N KILE DP + L + I ASA
Sbjct: 549 L---AACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASA 589
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/579 (36%), Positives = 309/579 (53%), Gaps = 67/579 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+ FG + LV Y AC L A +LF I +++ WN +I A+A E A+EL
Sbjct: 155 LSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALEL 214
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDM--- 117
+ ++ ++P++ T L AC+ +E GR + + R + D+ + A++DM
Sbjct: 215 FLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTK 274
Query: 118 ----------------------------YAKCSCVVNARQVFDKILERD----------- 138
YAK AR VF+ + ++
Sbjct: 275 CGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAY 334
Query: 139 -----------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELN 175
P E TLV+ +SA A + A+ G +H + R LN
Sbjct: 335 EQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLN 394
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD 235
+ ++LVDMYAKCG ++ A +F + E+ V W+AMI G MHG A+DLF +M++
Sbjct: 395 CHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQE 454
Query: 236 -EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLD 294
+V+P+ +TF VL ACS GL DEGR+FF M Y + P ++HY CMVD+LG +G L+
Sbjct: 455 AKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLE 514
Query: 295 EACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYA 354
EA +LI +M P VWGALL +C LH +V+L ELA ++L++LEP + G V+LSNIYA
Sbjct: 515 EAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYA 574
Query: 355 RAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEG 414
+ WE V++LRKLM D +KK CS IE H FL GD +HP IY+KL+ +
Sbjct: 575 KTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIAT 634
Query: 415 RMKEAGYVPGTESVFHDVENDE-KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICD 473
++K GY P + +E D+ K + HSE+LAIAFGL+ + + KNL+IC
Sbjct: 635 KLKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLVTLAPSQPIRVVKNLRICG 694
Query: 474 DCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
DCH K +S++ +R+I +RD R+HHF+DG CSC DYW
Sbjct: 695 DCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 178/396 (44%), Gaps = 71/396 (17%)
Query: 2 GFGFHPVLATKL--VHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNG-PYEVAI 58
G F P A+KL S+ L A LFD+IPQ NL+ WN LIRAYA + P++ +
Sbjct: 52 GLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFV 111
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
L + +P+ FTFPF +KA S L A G +H I+ + D+++ +L+ Y
Sbjct: 112 IFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFY 171
Query: 119 AKCSCVVNARQVFDKI------------------------------LERD---PSEATLV 145
C + A ++F I +ER+ P+ T+V
Sbjct: 172 GACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMV 231
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
V+SA A L GR + + R ++++ + A++DMY KCG V A+ LF+++ E+
Sbjct: 232 GVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPER 291
Query: 206 RVVSWNAMITGYA-------------------------------MHGHSTKALDLFEKMK 234
V SW M+ GYA +G +AL +F +++
Sbjct: 292 DVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQ 351
Query: 235 DE--VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGR 292
+PD +T V LSAC++ G D G + ++ I + + +VD+ G
Sbjct: 352 LSKIAKPDEVTLVSTLSACAQLGAIDLGG-WIHVYIKREGIVLNCHLISSLVDMYAKCGS 410
Query: 293 LDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
L++A ++ + + D VW A++ +HG K A
Sbjct: 411 LEKALEVFYSVEER-DVYVWSAMIAGLGMHGRGKAA 445
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 143/284 (50%), Gaps = 17/284 (5%)
Query: 59 ELYYRLLEIGLVPDNFTFP--FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
E++ R+L GL D F+ F A S+ S ++ R + + + + +++ LI
Sbjct: 43 EVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIP----QPNLYTWNTLIR 98
Query: 117 MYAKCSCVVNARQVFDKILER---DPSEATLVTVISASADIAALPQGRELHGFSWRHRFE 173
YA S + +F +L++ P++ T VI A++++ A G +HG + + F
Sbjct: 99 AYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFG 158
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
+++ + +LV Y CG + +A LF+ + K VVSWN+MI+ +A AL+LF KM
Sbjct: 159 MDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKM 218
Query: 234 KDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGR 292
+ E V P+ +T VGVLSAC++ + GR + S + I + M+D+ G
Sbjct: 219 ERENVMPNSVTMVGVLSACAKKLDLEFGR-WVCSYIERKGIKVDLTLCNAMLDMYTKCGS 277
Query: 293 LDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
+D+A L +M + D W +L+ G+ K+ + +L+
Sbjct: 278 VDDAQKLFDEMPER-DVFSWTIMLD-----GYAKMGDYDAARLV 315
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 221/574 (38%), Positives = 316/574 (55%), Gaps = 68/574 (11%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P LA L+ +Y C L A +LF+ +P RN+ W V + A++ NG + A+ + R+ +
Sbjct: 97 PFLANLLIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQ 156
Query: 67 IGLVPDNFTFPFALKACSALSA--IEEGRRIHEDVIRNKWETDVFVG------------- 111
G PD TF L A + + A I++GR IH + +V VG
Sbjct: 157 SGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRL 216
Query: 112 ----AALIDMYAKCSCVVNARQVFDKILERD----------------------------- 138
AA ++ K S NA K+ RD
Sbjct: 217 DDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAYAQHG 276
Query: 139 -------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
P + T VTVI A+++AL QGR +H F+ N+ V
Sbjct: 277 RGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVS 336
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQ 238
ALV MY KCG + A ++F ++ K +SWN +I+ YA HGHS +AL L+++M + V+
Sbjct: 337 NALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVK 396
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
P +TFVG+LSACS GGL +G +F M D+ I PSV H+ C++DLLG GRL EA
Sbjct: 397 PTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAEL 456
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN 358
++ M ++ + W +LL +CK HG +K A +++++ P +G YV+LSNIYA A
Sbjct: 457 VLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGR 516
Query: 359 WEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKE 418
W+ V K+RK+M RG+KKS SWIE+ + H F+SGD+SHP +EIY +L + MK
Sbjct: 517 WKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDSSHPQGEEIYVELGKMVEEMKG 576
Query: 419 AGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIA 478
GYVP T SVFHD+E +EK +++ CHSE+LAI +G + P + L I KNL++C DCH A
Sbjct: 577 LGYVPDTSSVFHDLEEEEKEDLLVCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTA 636
Query: 479 IKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
KF+S+IT R+I VRD R+H F++G CSC DYW
Sbjct: 637 TKFMSRITGRKIVVRDAARFHLFENGSCSCRDYW 670
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F + +++ LVH+Y C CL A +F + ++ WN +I +YA++G + A+ LY
Sbjct: 329 FDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQ 388
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ G+ P TF L ACS + +G
Sbjct: 389 EMDLQGVKPTEVTFVGLLSACSHGGLVADG 418
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/580 (35%), Positives = 314/580 (54%), Gaps = 70/580 (12%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRN--LFLWNVLIRAYAWNGPYEVAIEL 60
FG + L+H Y++C L A+ +F+ I N + WN ++ + G + A++L
Sbjct: 271 FGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDL 330
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+ G+ P+ T + AC+ + GR++ + + RN+ ++ V A IDM+ K
Sbjct: 331 FERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVK 390
Query: 121 C---------------------SCVVN----------ARQVFDKILERD----------- 138
C + +++ AR +FD + +D
Sbjct: 391 CGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGY 450
Query: 139 ------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFEL 174
P + TL++ +SA A + A+ G +HG+ + R +L
Sbjct: 451 EQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQL 510
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
N + T+L+DMY+K G V+ A +F + K V W+AMI G AMHG A++LF M+
Sbjct: 511 NRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQ 570
Query: 235 D-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
+ +V+P+ +TF +L ACS GL DEG+ F+ M R Y + P +HY+CMVD+LG +G L
Sbjct: 571 ETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHL 630
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIY 353
+EA I M + P VWGALL +C +HG+++LAE A +L+E+EP + G YV+LSN+Y
Sbjct: 631 EEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLY 690
Query: 354 ARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLE 413
A+ +WEGV++LR+ M D G+KK CS IE+ H F+ GD +HP +IYAKL +
Sbjct: 691 AKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEIM 750
Query: 414 GRMKEAGYVPGTESVFHDVENDE-KANMICCHSERLAIAFGLINTPDGTRLLITKNLKIC 472
R++ GYV T + VE +E K + HSE++AIAFGLI + I KNL++C
Sbjct: 751 ARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLIRADSQQAIRIVKNLRVC 810
Query: 473 DDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
DCH K +SK+ R+I +RD R+HHF G CSC DYW
Sbjct: 811 RDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDYW 850
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 186/407 (45%), Gaps = 76/407 (18%)
Query: 17 YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-EIGLVPDNFT 75
+S+ L A ++FD+IPQ NL+ WN+LIRA A + ++ ++ R+L + P+ FT
Sbjct: 183 FSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFT 242
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI- 134
FP +KA + G+ +H I+ + DVFV +LI YA C + A VF+ I
Sbjct: 243 FPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIE 302
Query: 135 ----------------------------LER------DPSEATLVTVISASADIAALPQG 160
ER P+ T+V+V+SA A L G
Sbjct: 303 GNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLG 362
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS----------- 209
R++ + R+ +N+ V A +DM+ KCG V++AR LF+ + ++ VVS
Sbjct: 363 RKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKM 422
Query: 210 --------------------WNAMITGYAMHGHSTKALDLFEKM---KDEVQPDHITFVG 246
WN +I+GY G +AL +F ++ K +PD +T +
Sbjct: 423 SEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLS 482
Query: 247 VLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK 306
LSAC++ G D G + ++ I + T ++D+ SG +++A ++ + K
Sbjct: 483 TLSACAQLGAMDIGE-WIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNK 541
Query: 307 PDPGVWGALLNSCKLHGHVKLAELALEKLIEL-EPHDAGNYVILSNI 352
D VW A++ +HG E A+E +++ E N V +N+
Sbjct: 542 -DVFVWSAMIAGLAMHGR---GEAAIELFLDMQETQVKPNSVTFTNL 584
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/510 (38%), Positives = 303/510 (59%), Gaps = 19/510 (3%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T +V Y + + +A ++FD +P++ W ++ Y NG E A EL+ E+ V
Sbjct: 207 TTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELF----EVMPV 262
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVI-RN--KWETDVFVGAALIDMYAKCSCVVNA 127
+ I + RR+ + + RN W+T +I ++ + + A
Sbjct: 263 KPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQT-------VIKIHERNGFELEA 315
Query: 128 RQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
+F + ++ P+ TL++++S A +A+L G+++H R +F+++V V + L+ M
Sbjct: 316 LDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTM 375
Query: 186 YAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHIT 243
Y KCG + ++ +F++ K ++ WN++I+GYA HG +AL +F +M +P+ +T
Sbjct: 376 YIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVT 435
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
FV LSACS G+ +EG +ESM + + P HY CMVD+LG +GR +EA ++I M
Sbjct: 436 FVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSM 495
Query: 304 RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVA 363
V+PD VWG+LL +C+ H + +AE +KLIE+EP ++G Y++LSN+YA W VA
Sbjct: 496 TVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVA 555
Query: 364 KLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDA-SHPNCDEIYAKLKWLEGRMKEAGYV 422
+LRKLM R ++KS CSW EV+NK HAF G SHP + I L L+G ++EAGY
Sbjct: 556 ELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYN 615
Query: 423 PGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFI 482
P HDV+ +EK N + HSERLA+A+ L+ +G + + KNL++C DCH AIK I
Sbjct: 616 PDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKII 675
Query: 483 SKITEREITVRDVNRYHHFKDGICSCGDYW 512
SK+ EREI +RD NR+HHF++G CSC DYW
Sbjct: 676 SKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 154/359 (42%), Gaps = 53/359 (14%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE------ 66
LV Y + A ++FD +P+RN+ W L++ Y NG +VA L++++ E
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSW 144
Query: 67 ----IG---------------LVP--DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWE 105
IG ++P DN + ++E R I +++ E
Sbjct: 145 TVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMS----E 200
Query: 106 TDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHG 165
V ++ Y + + V +AR++FD + E+ +E + +++ + EL
Sbjct: 201 RSVITWTTMVTGYGQNNRVDDARKIFDVMPEK--TEVSWTSMLMGYVQNGRIEDAEEL-- 256
Query: 166 FSWRHRFELNVKVK-----TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMH 220
FE+ + VK A++ + G + AR +F+ ++E+ SW +I + +
Sbjct: 257 ------FEV-MPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERN 309
Query: 221 GHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQH 279
G +ALDLF M+ + V+P T + +LS C+ G+ +VR D V
Sbjct: 310 GFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVR-CQFDVDVYV 368
Query: 280 YTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
+ ++ + G L ++ LI D +W ++++ HG L E AL+ E+
Sbjct: 369 ASVLMTMYIKCGELVKS-KLIFDRFPSKDIIMWNSIISGYASHG---LGEEALKVFCEM 423
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 109/227 (48%), Gaps = 24/227 (10%)
Query: 126 NARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL----NVKVKTA 181
+AR++FD++ +R+ +IS + ++ + E+ R F+L NV TA
Sbjct: 66 DARKLFDEMPDRN--------IISWNGLVSGYMKNGEID--EARKVFDLMPERNVVSWTA 115
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDH 241
LV Y G V VA +LF ++ EK VSW M+ G+ G A L+E + D+ D+
Sbjct: 116 LVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK---DN 172
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
I ++ + G DE R F+ M + SV +T MV G + R+D+A +
Sbjct: 173 IARTSMIHGLCKEGRVDEAREIFDEMS-----ERSVITWTTMVTGYGQNNRVDDARKIFD 227
Query: 302 QMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
M K + W ++L +G ++ AE E ++ ++P A N +I
Sbjct: 228 VMPEKTEVS-WTSMLMGYVQNGRIEDAEELFE-VMPVKPVIACNAMI 272
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F +A+ L+ +Y C L + +FDR P +++ +WN +I YA +G E A++++
Sbjct: 362 FDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFC 421
Query: 63 RL-LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDV 99
+ L P+ TF L ACS +EEG +I+E +
Sbjct: 422 EMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM 459
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 21/166 (12%)
Query: 169 RHRFELNVKVKTALVDM--YAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
R + + TA V + ++ G + AR LF+ K + SWN+M+ GY + A
Sbjct: 8 RRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDA 67
Query: 227 LDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDL 286
LF++M D + I++ G++S + G DE R F+ M + +V +T +V
Sbjct: 68 RKLFDEMPDR---NIISWNGLVSGYMKNGEIDEARKVFDLMP-----ERNVVSWTALVKG 119
Query: 287 LGHSGRLDEACDLIMQMRVKPDPGVWGALL----------NSCKLH 322
H+G++D A L +M K + W +L ++CKL+
Sbjct: 120 YVHNGKVDVAESLFWKMPEK-NKVSWTVMLIGFLQDGRIDDACKLY 164
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/508 (40%), Positives = 311/508 (61%), Gaps = 15/508 (2%)
Query: 11 TKLVHLY--SACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
T LV +Y +A + A FD P+R++FL NV++ AY G A +++ +
Sbjct: 87 TALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNVMLAAYVARGEVAEARKVFDGMSGRD 146
Query: 69 LVP-DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
LV + +A++ ++ ++ + D F +++I YAK C A
Sbjct: 147 LVSWNTMIHGYAVRGDVGMA---------REIFDGTRDRDAFSWSSMISAYAKGRCSKEA 197
Query: 128 RQVFD--KILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
+++ ++ P ++V+V+SA + + AL G E+H F +R E+++K+ TALVDM
Sbjct: 198 LELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDM 257
Query: 186 YAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITF 244
YAKCG ++ + +F + K V++W++MI G A HG AL LF +M + +QP+ ITF
Sbjct: 258 YAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITF 317
Query: 245 VGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
+GVL AC+ GL ++G+ +F SM + + P ++HY CMVDLLG +G ++EA +LI M
Sbjct: 318 IGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMT 377
Query: 305 VKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAK 364
KPDP +W LL +C++H +V++AE A+ KL L+P G+YV+LSNIYA+A +WEGVA+
Sbjct: 378 FKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKVLDPLADGHYVLLSNIYAQANSWEGVAE 437
Query: 365 LRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPG 424
+RK + I++ S IE +N H F+SGD SHP +EIY L+ + R+++AGY P
Sbjct: 438 MRKTIRRENIQRVPGRSSIEWENTVHEFVSGDRSHPRIEEIYKMLEEMMDRLRQAGYRPM 497
Query: 425 TESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISK 484
T V D++ K + HSE+LAIAFGL+ TP + L ITKNL+ C+DCH AIK IS
Sbjct: 498 TSLVLQDIDEQSKKRALAEHSEKLAIAFGLLVTPARSTLRITKNLRACEDCHSAIKLISL 557
Query: 485 ITEREITVRDVNRYHHFKDGICSCGDYW 512
+R++ VRD NR+HHF +G CSC DYW
Sbjct: 558 AYDRKLIVRDRNRFHHFSEGQCSCKDYW 585
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 115/237 (48%), Gaps = 14/237 (5%)
Query: 92 GRRIHEDVIRNKWET-DVFVGAALIDMYAKCSC--VVNARQVFDKILERDPSEATLVTVI 148
G +H +R+ + D+FV AL++MYAK + + AR FD+ RD + ++
Sbjct: 66 GASLHARALRSGFAAADLFVRTALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNV--ML 123
Query: 149 SASADIAALPQGREL-HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+A + + R++ G S R N ++ YA G V +AR +F+ R++
Sbjct: 124 AAYVARGEVAEARKVFDGMSGRDLVSWNT-----MIHGYAVRGDVGMAREIFDGTRDRDA 178
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
SW++MI+ YA S +AL+L+ +M+ V PD I+ V VLSACS G G
Sbjct: 179 FSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHR- 237
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
V ++ ++ T +VD+ G ++ + + M VK D W +++ HG
Sbjct: 238 FVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVK-DVLTWSSMIIGLANHG 293
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 48/86 (55%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T LV +Y+ C + N+ ++F +P +++ W+ +I A +G A+ L+ ++ G
Sbjct: 250 LGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQG 309
Query: 69 LVPDNFTFPFALKACSALSAIEEGRR 94
L P+ TF L AC+ + + +G++
Sbjct: 310 LQPNEITFIGVLIACTHVGLVNDGKK 335
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/549 (37%), Positives = 298/549 (54%), Gaps = 71/549 (12%)
Query: 35 QRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRR 94
+R+ L + LIRA+A +G + A+ LY L+ GL P T P LK+ + A+ RR
Sbjct: 50 RRSAELHDALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARR 109
Query: 95 IHEDV------------------------------------IRNKWETDVFVGAALIDMY 118
+ V +R D LI +
Sbjct: 110 LALAVHAHAVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAH 169
Query: 119 AKCSCVVNARQVFDKILERD---------------------------------PSEATLV 145
A+ V +AR +FD++ ER+ P + LV
Sbjct: 170 ARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLV 229
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
V++A A + AL QG+ +HG+ + + V + TALVDMYAKCG V++ +FE +++K
Sbjct: 230 GVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDK 289
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF 264
V++W MI G AMHG + +L LF +M+ V+PD I F+G L AC+ GL D+GR F
Sbjct: 290 NVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELF 349
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
SMV +Y I P ++HY CMVDLL +G L EA D++ +M +KPD +WGAL+ C+ H +
Sbjct: 350 NSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKN 409
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
V+LAE ++ IELEP +G YV+L NIY+ + ++R LM ++G++K+ CS +E
Sbjct: 410 VELAEYVIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREKGVEKTPGCSNVE 469
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK-EAGYVPGTESVFHDVENDEKANMICC 443
+K H F+ GD SHP +I K ++ R++ E GYVP + V D+E +E + +
Sbjct: 470 IKGVIHQFIVGDLSHPRIKDILTKWYEIDSRIRLEEGYVPDKKEVLLDIEEEEMESALSR 529
Query: 444 HSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKD 503
HSE+LAIAF LI+T D + I KNL++C DCH K ISK+ REI VRD R+H FKD
Sbjct: 530 HSEKLAIAFALISTEDYMPIRIVKNLRVCQDCHHVTKLISKVYGREIIVRDRTRFHLFKD 589
Query: 504 GICSCGDYW 512
G CSC DYW
Sbjct: 590 GTCSCKDYW 598
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 138/301 (45%), Gaps = 28/301 (9%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+A LFD +P+RN W+ ++ Y G A+ ++ ++ G+ PD+ L AC+
Sbjct: 177 DARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACA 236
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATL 144
L A+E+G+ +H + N VF+G AL+DMYAKC V +VF+ + +D +
Sbjct: 237 QLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGM--KDKNVLAW 294
Query: 145 VTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC-----GLVKVARNLF 199
T+I A GR + + E + + + A C GLV R LF
Sbjct: 295 TTMIKGLA-----MHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELF 349
Query: 200 EQLR-----EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRG 254
+ + ++ + M+ A +G ++A D+ EKM ++PD + + +++ C
Sbjct: 350 NSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMP--MKPDALIWGALMAGCR-- 405
Query: 255 GLFDEGRMFFESMVRDY-HIDPSVQ-HYTCMVDLLGHSGRLDEACDLIMQMR---VKPDP 309
F + E +++ + ++P Y + ++ SGR A ++ MR V+ P
Sbjct: 406 --FHKNVELAEYVIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREKGVEKTP 463
Query: 310 G 310
G
Sbjct: 464 G 464
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 94/203 (46%), Gaps = 9/203 (4%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T LV +Y+ C + ++F+ + +N+ W +I+ A +G ++ L+ ++ G
Sbjct: 262 LGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSG 321
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN-KWETDVFVGAALIDMYAKCSCVVNA 127
+ PD+ F AL AC+ +++GR + ++ N + + ++D+ A+ + A
Sbjct: 322 VKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEA 381
Query: 128 RQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALV---D 184
R + +K+ + +A + + A + EL + +H EL A V +
Sbjct: 382 RDMVEKMPMK--PDALIWGALMAGCR---FHKNVELAEYVIKHWIELEPDKSGAYVLLGN 436
Query: 185 MYAKCGLVKVARNLFEQLREKRV 207
+Y+ G AR + +REK V
Sbjct: 437 IYSASGRHASAREIRNLMREKGV 459
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/572 (36%), Positives = 308/572 (53%), Gaps = 77/572 (13%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P +A+ +V LY+ C C A ++F + RN W VLI + G + ++EL+ ++
Sbjct: 329 PYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRA 388
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
+ D F + CS + R++H +++ V + +LI MYAKC + N
Sbjct: 389 ELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQN 448
Query: 127 A-------------------------------RQVFDKILERD----------------- 138
A R+ FD + R+
Sbjct: 449 AESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAE 508
Query: 139 -----------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
P T VT+ AD+ A G ++ G + + L+ V A
Sbjct: 509 EDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNA 568
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPD 240
++ MY+KCG + AR +F+ L K +VSWNAMITGY+ HG +A+++F+ M K +PD
Sbjct: 569 VITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPD 628
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
+I++V VLS+CS GL EG+ +F+ + RD+++ P ++H++CMVDLL +G L EA +LI
Sbjct: 629 YISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLI 688
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
+M +KP VWGALL++CK HG+ +LAELA + L +L+ D+G Y++L+ IYA A
Sbjct: 689 DEMPMKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSV 748
Query: 361 GVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAG 420
A++RKLM D+GIKK+ SW+EVKNK H F + D SHP I KL L ++ + G
Sbjct: 749 DSAQVRKLMRDKGIKKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELMEKIAQLG 808
Query: 421 YVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIK 480
YV TES+ ++ HSE+LA+AFG++N P + I KNL+IC DCH IK
Sbjct: 809 YVR-TESLRSEIH----------HSEKLAVAFGIMNLPAWMPIHIMKNLRICGDCHTVIK 857
Query: 481 FISKITEREITVRDVNRYHHFKDGICSCGDYW 512
IS +T RE +RD R+HHFK G CSCGDYW
Sbjct: 858 LISTVTGREFVIRDAVRFHHFKGGSCSCGDYW 889
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 148/300 (49%), Gaps = 36/300 (12%)
Query: 17 YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTF 76
Y+ + +A +LF+ +P+R++ WN+++ A + +G A+ + + G+ D+ T+
Sbjct: 238 YAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTY 297
Query: 77 PFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILE 136
+L AC+ LS++ G+++H VIR+ D +V +A++++YAKC C AR+VF + +
Sbjct: 298 TSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRD 357
Query: 137 RDPSEAT---------------------------------LVTVISASADIAALPQGREL 163
R+ T L T+IS ++ + R+L
Sbjct: 358 RNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQL 417
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
H S + V + +L+ MYAKCG ++ A ++F + E+ +VSW M+T Y+ G+
Sbjct: 418 HSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNI 477
Query: 224 TKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
KA + F+ M + IT+ +L A + G ++G + +M+ + + P Y +
Sbjct: 478 GKAREFFDGMSTR---NVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTL 534
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 135/306 (44%), Gaps = 66/306 (21%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG-LVP 71
+++ Y+ L +A +LF R+P+R++ WN L+ Y +G + A+E + + G +P
Sbjct: 101 MMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLP 160
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC-------- 123
+ FTF A+K+C AL E ++ + + ++ D V ++DM+ +C
Sbjct: 161 NAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQF 220
Query: 124 -----------------------VVNARQVFDKILERD----------------PSEATL 144
V +A ++F+ + ERD EA
Sbjct: 221 SQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALS 280
Query: 145 VTV--------ISASADIAALPQGRELHGFSWRHRFELNV---------KVKTALVDMYA 187
V V + ++ ++L +L W + V V +A+V++YA
Sbjct: 281 VAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYA 340
Query: 188 KCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVG 246
KCG K AR +F LR++ VSW +I G+ +G +++L+LF +M+ E+ D
Sbjct: 341 KCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALAT 400
Query: 247 VLSACS 252
++S CS
Sbjct: 401 IISGCS 406
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 124/341 (36%), Gaps = 78/341 (22%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLF-DRIPQRNLFLWNVLIRAYAWNGPYEVAIE 59
+G L L+H Y +C L +A L I + N+ N+++ YA G A E
Sbjct: 57 VGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGSLSDAEE 116
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
L+ GR DV W T L+ Y
Sbjct: 117 LF------------------------------GRMPRRDV--TSWNT-------LMSGYY 137
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAAL---PQGRELHGFSWRHRFELNV 176
+ ++A + F + S T A AL +L G + F+ +
Sbjct: 138 QSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDP 197
Query: 177 KVKTALVDMYAKCGLVKVA--------------RN-----------------LFEQLREK 205
V T +VDM+ +CG V A RN LFE + E+
Sbjct: 198 DVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPER 257
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF 264
VVSWN M++ + G + +AL + M + V+ D T+ L+AC++ G+
Sbjct: 258 DVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLH 317
Query: 265 ESMVRDYH-IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
++R IDP V + MV+L G EA + +R
Sbjct: 318 AQVIRSLPCIDPYVA--SAMVELYAKCGCFKEARRVFSSLR 356
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 90/228 (39%), Gaps = 41/228 (17%)
Query: 79 ALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD 138
AL++C A A+ R +H ++ + VF+ L+ Y C + +AR +L D
Sbjct: 34 ALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDAR----GLLRGD 89
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
+E ++T H +N YAK G + A L
Sbjct: 90 ITEPNVIT-----------------------HNIMMN---------GYAKLGSLSDAEEL 117
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK--DEVQPDHITFVGVLSACSRGGL 256
F ++ + V SWN +++GY G A++ F M+ + P+ TF + +C G
Sbjct: 118 FGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGW 177
Query: 257 FDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
+ + + + DP V T +VD+ G +D A Q+
Sbjct: 178 HEVALQLLGLLTKFGFQGDPDVA--TGIVDMFVRCGAVDFASKQFSQI 223
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Cucumis sativus]
Length = 1037
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/545 (36%), Positives = 313/545 (57%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + + L+ +Y+ L A ++ R+P+ ++ W +I Y + + A++L+
Sbjct: 493 GFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLF 552
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ DN F A+ AC+ + A+ +G++IH + D+ + ALI +YA+C
Sbjct: 553 EEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARC 612
Query: 122 SCVVNARQVFDKILERDP-SEATLVTVISASA---------------------------- 152
+ A F+KI +++ S +LV+ ++ S
Sbjct: 613 GRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAI 672
Query: 153 ----DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A + QG+++H + ++ +V +L+ +YAK G + A F + E+ V+
Sbjct: 673 SAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVI 732
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNAMITGY+ HG +AL LFE+MK + P+H+TFVGVLSACS GL EG +FESM
Sbjct: 733 SWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESM 792
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ + + P +HY C+VDLLG +G+LD A + I +M + D +W LL++C +H ++++
Sbjct: 793 FKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEI 852
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E A L+ELEP D+ YV++SNIYA + W RKLM DRG+KK SWIEVKN
Sbjct: 853 GERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKN 912
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
HAF +GD HP ++IY + L R E GYV + S+ ++ E +K + HSE+
Sbjct: 913 AVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEK 972
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGL++ + + + KNL++C+DCH IK++SKI+ R I VRD +R+HHF G+CS
Sbjct: 973 LAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCS 1032
Query: 508 CGDYW 512
C D+W
Sbjct: 1033 CKDFW 1037
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 172/374 (45%), Gaps = 40/374 (10%)
Query: 3 FGFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GFH + LV LYS L +A ++F + R+ +N LI G + A+EL
Sbjct: 290 WGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALEL 349
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ L PD T L AC+++ A+ +G ++H I+ D+ + +L+D+Y+K
Sbjct: 350 FTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSK 409
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C+ V A + F + P++ T ++
Sbjct: 410 CADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSI 469
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ + AL G ++H + F+LNV V + L+DMYAK G + +A + +L E V
Sbjct: 470 LRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDV 529
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF-E 265
VSW AMI GY H ++AL LFE+M+ +Q D+I F +SAC+ +G+ +
Sbjct: 530 VSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQ 589
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
S + D S+ + ++ L GR+ EA ++ K + W +L++ G+
Sbjct: 590 SYAAGFGADLSINN--ALISLYARCGRIQEAYLAFEKIGDKNNIS-WNSLVSGLAQSGYF 646
Query: 326 KLAELALEKLIELE 339
+ A +++ E
Sbjct: 647 EEALQVFVRMLRTE 660
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 131/294 (44%), Gaps = 35/294 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF P+L LV Y H A ++FD R++F WN +I + L+
Sbjct: 88 GFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLF 147
Query: 62 YRLLEIGLVPDNFTFPFALKACSALS-AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
R+L G+ P+ +TF LKAC A +++H +++ V LID+Y+K
Sbjct: 148 RRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSK 207
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ +A++VF+ I +D P+ L +V
Sbjct: 208 NGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSV 267
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+SAS I G +LH + F V LV +Y++ + A +F + +
Sbjct: 268 LSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDG 327
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEG 260
VS+N++I+G G S +AL+LF KM +D ++PD IT +LSAC+ G +G
Sbjct: 328 VSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKG 381
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 159/351 (45%), Gaps = 40/351 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF P++A L+ LYS + +A ++F+ I +++ W +I + NG E AI L+
Sbjct: 190 GFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLF 249
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + P + L A + + E G ++H VI+ + ++ +V L+ +Y++
Sbjct: 250 CDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRS 309
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+++A ++F + RD P T+ +++
Sbjct: 310 RKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLL 369
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A + AL +G +LH + + ++ ++ +L+D+Y+KC V+ A F + +V
Sbjct: 370 SACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIV 429
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
WN M+ Y + + + ++F +M+ E + P+ T+ +L C+ G G +
Sbjct: 430 LWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHV 489
Query: 268 VRDYHIDPSVQHYTC--MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
++ + Y C ++D+ G+L A ++ ++ + D W A++
Sbjct: 490 IK---TGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMI 536
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/539 (35%), Positives = 306/539 (56%), Gaps = 36/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ +Y C + + ++F+ + R+ W ++ +A + + A+E+ L + G
Sbjct: 404 VGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEG 463
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
++ D+ L+ C L +I +++H IRN D+ + LID+Y +C ++
Sbjct: 464 IMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGL-LDLILENRLIDIYGECGEFDHSL 522
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+F ++ ++D P LV+++ A A ++
Sbjct: 523 NLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLS 582
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+L +G+++HGF R F + V ++LVDMY+ CG + A +FE+ + K VV W AMI
Sbjct: 583 SLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMIN 642
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
MHGH +A+DLF++M + + PDH++F+ +L ACS L +EG+ + + MV Y +
Sbjct: 643 ATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLK 702
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P +HY C+VD+LG SG+ +EA + I M + P VW ALL +C++H + LA +A K
Sbjct: 703 PWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANK 762
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L+ELEP + GNY+++SN++A W + R M +RG++K+ ACSWIE+ N H F S
Sbjct: 763 LLELEPDNPGNYILVSNVFAEMGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTS 822
Query: 395 GDASHPNCDEIYAKLKWL-EGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
GD H + + I+ KL + E +E GYV T V HD +EK +M+ HSER+AIAFG
Sbjct: 823 GDYCHRDSEAIHLKLSEITEMLRREGGYVEDTRFVLHDTSEEEKIDMLHKHSERIAIAFG 882
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LI+T G + I KNL++C DCH K +SK+ ER+I VRD NR+HHF G CSC D+W
Sbjct: 883 LISTRPGMPIRIAKNLRVCGDCHEFTKLVSKLFERDIVVRDANRFHHFSGGSCSCEDFW 941
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 163/389 (41%), Gaps = 85/389 (21%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL---L 65
LATKLV +Y C + +A +LF+ +P R +F WN L+ AY +G A+ +Y +
Sbjct: 97 LATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASA 156
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC---- 121
G PD T LKAC A G +H ++ + V ALI MYAKC
Sbjct: 157 APGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLD 216
Query: 122 ------------------------SCVVNARQVFDKILERDPSEA-------TLVTVISA 150
CV N R + L R A T V V+
Sbjct: 217 SALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQV 276
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
A++ L GRELH + ELN++ LV MYAK G V A +F Q+ EK +SW
Sbjct: 277 CAELGLLSLGRELHAALLKCGSELNIQCNALLV-MYAKYGRVDSALRVFGQIAEKDYISW 335
Query: 211 NAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMF------ 263
N+M++ Y + +A+D F E ++ QPDH V + SA + GR F
Sbjct: 336 NSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIK 395
Query: 264 -----------------------------FESM-VRDYHIDPSVQHYTCMVDLLGHSGRL 293
FESM +RD HI +T ++ S R
Sbjct: 396 QRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRD-HIS-----WTTILACFAQSSRH 449
Query: 294 DEACDLIMQMR---VKPDPGVWGALLNSC 319
EA ++I++++ + D + G++L +C
Sbjct: 450 SEALEMILELQKEGIMVDSMMIGSILETC 478
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 173/360 (48%), Gaps = 39/360 (10%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ +Y+ + +A ++F +I +++ WN ++ Y N Y AI+ + +L+ G PD
Sbjct: 307 LLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPD 366
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+ A LS + GR H I+ + TD+ VG L+DMY KC + + +VF+
Sbjct: 367 HACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFE 426
Query: 133 KILERD---------------------------PSEATLV------TVISASADIAALPQ 159
+ RD E +V +++ + ++
Sbjct: 427 SMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISL 486
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
+++H ++ R+ L++ ++ L+D+Y +CG + NLF+++ +K +VSW +MI
Sbjct: 487 LKQVHCYAIRNGL-LDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTN 545
Query: 220 HGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV-RDYHIDPSV 277
+G A+ LF +M K +QPD + V +L A + +G+ ++ R++ I+ V
Sbjct: 546 NGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPV 605
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+ +VD+ G ++ A + + + K D +W A++N+ +HGH K A +++++
Sbjct: 606 --VSSLVDMYSGCGSMNYAIRVFERAKCK-DVVLWTAMINATGMHGHGKQAIDLFKRMLQ 662
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/563 (36%), Positives = 315/563 (55%), Gaps = 66/563 (11%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFT 75
+ + L A+ +F +I NLF++NVLIR ++ A Y ++L+ + PDN T
Sbjct: 62 FHKPTNLLGYAYGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNIT 121
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA---------------- 119
FPF +KA + + + G + H ++R ++ DV+V +L+ MYA
Sbjct: 122 FPFLIKASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMP 181
Query: 120 ---------------KCSCVVNARQVFDKILERD-------------------------- 138
KC V +AR++FD++ R+
Sbjct: 182 FRDVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEL 241
Query: 139 -------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGL 191
+E +V+VIS+ A + AL G H + + +N+ + TALVDMY +CG
Sbjct: 242 MKREGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGE 301
Query: 192 VKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSA 250
++ A +FE+L +K +SW+++I G A+HGH+ KA+ F +M + P IT VLSA
Sbjct: 302 IEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSA 361
Query: 251 CSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPG 310
CS GGL D+G +E+M RDY I+P ++HY C+VD+LG +G+L EA + I++M VKP+
Sbjct: 362 CSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAP 421
Query: 311 VWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMI 370
+ GALL +CK++ + ++AE LIE++P +G YV+LSNIYA A WE + LR +M
Sbjct: 422 ILGALLGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMK 481
Query: 371 DRGIKKSIACSWIEVKNKAHAFLSG-DASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVF 429
++ +KK S IE+ K + F G D HP +I + + G+++ GY T F
Sbjct: 482 EKLVKKPPGWSLIEIDGKINKFSMGDDQKHPEMGKIKRLWEEILGKIRLIGYKGNTGDAF 541
Query: 430 HDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITERE 489
DV+ +EK I HSE+LAIA+G++ T GT + I KNL++C+DCH A K IS++ RE
Sbjct: 542 FDVDEEEKETAIHMHSEKLAIAYGMMKTKTGTTIRIVKNLRVCEDCHTATKLISEVYGRE 601
Query: 490 ITVRDVNRYHHFKDGICSCGDYW 512
VRD NR+HHF++G+CSC DYW
Sbjct: 602 FIVRDRNRFHHFRNGLCSCRDYW 624
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+L T LV +Y C + A ++F+ +P ++ W+ +I+ A +G AI + +++ +
Sbjct: 287 ILGTALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRL 346
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN 102
G P + T L ACS +++G I+E++ R+
Sbjct: 347 GFSPRDITLTAVLSACSHGGLVDKGLEIYENMKRD 381
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 95/228 (41%), Gaps = 27/228 (11%)
Query: 163 LHGFSWRHRFELNVKVKTALVDM---------YAKCGLVKVARNLFEQLREKRVVSWNAM 213
+HGF R +V V + L+ + + L+ A +F Q++ + +N +
Sbjct: 31 IHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPTNLLGYAYGIFSQIQNPNLFVFNVL 90
Query: 214 ITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR--- 269
I ++ +KA + +M K + PD+ITF ++ A + G +VR
Sbjct: 91 IRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEMECVVVGEQTHSQIVRFGF 150
Query: 270 --DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS-CKLHGHVK 326
D +++ S+ H L+ +GR + QM + D W +++ CK
Sbjct: 151 QNDVYVENSLVHMYANCGLIAAAGR------IFGQMPFR-DVVSWTSMVAGYCK----CG 199
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
+ E A E E+ + + I+ N YA+ +E L +LM G+
Sbjct: 200 MVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGV 247
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/571 (35%), Positives = 312/571 (54%), Gaps = 67/571 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A L+H Y +C L +A ++F I ++++ WN +I + G + A+EL+ ++
Sbjct: 168 VANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESED 227
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA- 127
+ + T L AC+ + +E GR++ + N+ ++ + A++DMY KC + +A
Sbjct: 228 VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAK 287
Query: 128 ------------------------------RQVFDKILERD----------------PSE 141
R+V + + ++D P+E
Sbjct: 288 RLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNE 347
Query: 142 A------------------TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALV 183
A TLV+ +SA A + AL GR +H + +H +N V +AL+
Sbjct: 348 ALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALI 407
Query: 184 DMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHI 242
MY+KCG ++ +R +F + ++ V W+AMI G AMHG +A+D+F KM++ V+P+ +
Sbjct: 408 HMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGV 467
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
TF V ACS GL DE F M +Y I P +HY C+VD+LG SG L++A I
Sbjct: 468 TFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEA 527
Query: 303 MRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGV 362
M + P VWGALL +CK+H ++ LAE+A +L+ELEP + G +V+LSNIYA+ WE V
Sbjct: 528 MPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENV 587
Query: 363 AKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYV 422
++LRK M G+KK CS IE+ H FLSGD +HP +++Y KL + ++K GY
Sbjct: 588 SELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYE 647
Query: 423 PGTESVFHDVENDE-KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKF 481
P V +E +E K + HSE+LAI +GLI+T + + KNL++C DCH K
Sbjct: 648 PEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKL 707
Query: 482 ISKITEREITVRDVNRYHHFKDGICSCGDYW 512
IS++ +REI VRD R+HHF++G CSC D+W
Sbjct: 708 ISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 185/387 (47%), Gaps = 73/387 (18%)
Query: 7 PVLATKLVHL--YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV-AIELYYR 63
P A+KL + S+ L A ++FD IP+ N F WN LIRAYA +GP V +I +
Sbjct: 62 PYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA-SGPDPVLSIWAFLD 120
Query: 64 LL-EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
++ E P+ +TFPF +KA + +S++ G+ +H +++ +DVFV +LI Y C
Sbjct: 121 MVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCG 180
Query: 123 CVVNARQVFDKILERD---------------------------------PSEATLVTVIS 149
+ +A +VF I E+D S T+V V+S
Sbjct: 181 DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLS 240
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE----- 204
A A I L GR++ + +R +N+ + A++DMY KCG ++ A+ LF+ + E
Sbjct: 241 ACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT 300
Query: 205 --------------------------KRVVSWNAMITGYAMHGHSTKALDLFE--KMKDE 236
K +V+WNA+I+ Y +G +AL +F +++
Sbjct: 301 WTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKN 360
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
++ + IT V LSAC++ G + GR + S ++ + I + + ++ + G L+++
Sbjct: 361 MKLNQITLVSTLSACAQVGALELGR-WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKS 419
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHG 323
++ + K D VW A++ +HG
Sbjct: 420 REVFNSVE-KRDVFVWSAMIGGLAMHG 445
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 136/260 (52%), Gaps = 12/260 (4%)
Query: 64 LLEIGLVPDNFTFP--FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ G D ++ FA+ A S+ +++E R++ +++ + + F LI YA
Sbjct: 53 MIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK----PNSFAWNTLIRAYASG 108
Query: 122 S-CVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
V++ D + E P++ T +I A+A++++L G+ LHG + + +V V
Sbjct: 109 PDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFV 168
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-V 237
+L+ Y CG + A +F ++EK VVSWN+MI G+ G KAL+LF+KM+ E V
Sbjct: 169 ANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDV 228
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
+ H+T VGVLSAC++ + GR S + + ++ ++ M+D+ G +++A
Sbjct: 229 KASHVTMVGVLSACAKIRNLEFGRQVC-SYIEENRVNVNLTLANAMLDMYTKCGSIEDAK 287
Query: 298 DLIMQMRVKPDPGVWGALLN 317
L M K D W +L+
Sbjct: 288 RLFDAMEEK-DNVTWTTMLD 306
>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 691
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/545 (37%), Positives = 307/545 (56%), Gaps = 37/545 (6%)
Query: 4 GFHPVL--ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF P L +++ ++ C + +A +LFD +P++++ W ++ G + A L+
Sbjct: 148 GFEPDLYVMNRVLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLF 207
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + + TF ++A + L ++ G++IH ++ D FV ALIDMY+KC
Sbjct: 208 LCMWKEFNDGRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKC 267
Query: 122 SCVVNARQVFDKILE-----------------------------RDPSEA----TLVTVI 148
+ +A VFD++ E RD T+ VI
Sbjct: 268 GSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVI 327
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A +A+L ++ H RH F ++ TALVD Y+K G ++ AR++F ++R K V+
Sbjct: 328 RICARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVI 387
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNA+I GY HG +A+++FE+M E V P H+TF+ VLSACS GL G F SM
Sbjct: 388 SWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSM 447
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
RD+ + P HY CM++LLG LDEA LI KP +W ALL +C++H +++L
Sbjct: 448 KRDHKVKPRAMHYACMIELLGRESLLDEAYALIRTAPFKPTANMWAALLTACRMHKNLEL 507
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
+LA EKL +EP NY++L N+Y + + A + + + +G++ ACSW+EVK
Sbjct: 508 GKLAAEKLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKGLRMLPACSWVEVKK 567
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ +AFL GD SH EIY K+ L + + GY E++ DV+ +E+ ++ HSE+
Sbjct: 568 QPYAFLCGDKSHSQTKEIYQKVDNLMVEICKHGYAEENETLLPDVDEEEQ-RILKYHSEK 626
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGLINTP T L IT+ ++C DCH AIK I+ +T REI VRD +R+HHF++G CS
Sbjct: 627 LAIAFGLINTPHWTPLQITQGHRVCGDCHSAIKLIAMVTGREIVVRDASRFHHFRNGSCS 686
Query: 508 CGDYW 512
CGDYW
Sbjct: 687 CGDYW 691
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 148/297 (49%), Gaps = 36/297 (12%)
Query: 75 TFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI 134
T+ + AC L +I +R+ +I + +E D++V ++ M+ KC +++AR++FD++
Sbjct: 120 TYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEM 179
Query: 135 LERDP----------------SEA-----------------TLVTVISASADIAALPQGR 161
E+D SEA T T+I ASA + + G+
Sbjct: 180 PEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLVQVGK 239
Query: 162 ELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHG 221
++H + + + V AL+DMY+KCG ++ A +F+Q+ EK V WN++I YA+HG
Sbjct: 240 QIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHG 299
Query: 222 HSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHY 280
+S +AL L+ +M+D DH T V+ C+R + + ++VR + +
Sbjct: 300 YSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVR-HGFATDIVAN 358
Query: 281 TCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
T +VD GR+++A + +MR K + W AL+ HG + A E++++
Sbjct: 359 TALVDFYSKWGRMEDARHVFNRMRHK-NVISWNALIAGYGNHGQGQEAVEMFEQMLQ 414
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 118/269 (43%), Gaps = 27/269 (10%)
Query: 142 ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
+T ++SA + ++ + + + FE ++ V ++ M+ KCGL+ AR LF++
Sbjct: 119 STYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDE 178
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHI-TFVGVLSACSRGGLFDEG 260
+ EK V SW M+ G G+ ++A LF M E TF ++ A + GL G
Sbjct: 179 MPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLVQVG 238
Query: 261 RMFFESMVRDYHIDPSVQHYT--CMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
+ ++ D H+ ++D+ G +++A + QM K G W +++ S
Sbjct: 239 KQIHSCALKRGVGD---DHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVG-WNSIIAS 294
Query: 319 CKLHGHVKLAELALEKLIELEPHDAGNYV------ILSNIYARAANWEGVAKLRKLMIDR 372
LHG+ +E AL E+ D+G V I+ I AR A+ E + ++
Sbjct: 295 YALHGY---SEEALSLYFEMR--DSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRH 349
Query: 373 GIKKSIACS---------WIEVKNKAHAF 392
G I + W +++ H F
Sbjct: 350 GFATDIVANTALVDFYSKWGRMEDARHVF 378
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/557 (36%), Positives = 310/557 (55%), Gaps = 67/557 (12%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG--LVPDNFTFPFAL 80
L A+Q+ DR + LF N +IRA+ + E + + Y R+L G L PDN+T F +
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC----------------- 123
+AC+ L E G ++H IR ++ D V LI +YA+ C
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175
Query: 124 --------------VVNARQVFDKILERDP------------------------------ 139
VV AR++F+ + ERDP
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG 235
Query: 140 ---SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
+ +++V+SA + AL QGR H + R++ ++ V++ T LVD+YAKCG ++ A
Sbjct: 236 VKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAM 295
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGG 255
+F + EK V +W++ + G AM+G K L+LF MK D V P+ +TFV VL CS G
Sbjct: 296 EVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVG 355
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
DEG+ F+SM ++ I+P ++HY C+VDL +GRL++A +I QM +KP VW +L
Sbjct: 356 FVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSL 415
Query: 316 LNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIK 375
L++ +++ +++L LA +K++ELE + G YV+LSNIYA + +W+ V+ +R+ M +G++
Sbjct: 416 LHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVR 475
Query: 376 KSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVEND 435
K CS +EV + H F GD SHP +I A K + R++ AGY T V D++ +
Sbjct: 476 KQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEE 535
Query: 436 EKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDV 495
EK + +C HSE+ AIAFG+++ + + I KNL++C DCH ISKI REI VRD
Sbjct: 536 EKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDR 595
Query: 496 NRYHHFKDGICSCGDYW 512
NR+HHFKDG CSC +W
Sbjct: 596 NRFHHFKDGHCSCNGFW 612
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 131/311 (42%), Gaps = 68/311 (21%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP--------------------------- 34
GF P + T L+ LY+ CL + H++F+ IP
Sbjct: 138 GFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLF 197
Query: 35 ----QRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIE 90
+R+ WN +I YA G A+ +++ + G+ + L AC+ L A++
Sbjct: 198 EGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALD 257
Query: 91 EGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------------ 138
+GR H + RNK + V + L+D+YAKC + A +VF + E++
Sbjct: 258 QGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLA 317
Query: 139 ---------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
P+ T V+V+ + + + +G+ H S R+ F + +
Sbjct: 318 MNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR-HFDSMRNEFGIEPQ 376
Query: 178 VK--TALVDMYAKCGLVKVARNLFEQLREK-RVVSWNAMITGYAMHGHSTKALDLFEKMK 234
++ LVD+YA+ G ++ A ++ +Q+ K W++++ M+ + + +KM
Sbjct: 377 LEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKML 436
Query: 235 DEVQPDHITFV 245
+ +H +V
Sbjct: 437 ELETANHGAYV 447
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/544 (35%), Positives = 306/544 (56%), Gaps = 34/544 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F + + + L+ +Y+ L A + R +++ W +I Y + A+ +
Sbjct: 504 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFR 563
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
++L+ G+ D A+ AC+ L A++EG++IH + + +D+ AL+ +Y+KC
Sbjct: 564 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCG 623
Query: 123 CVVNARQVFD---------------------------KILER------DPSEATLVTVIS 149
+ A F+ ++ R D + T + +
Sbjct: 624 NIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVK 683
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A+++ A + QG+++H + ++ +V A++ MYAKCG + A+ F +L K VS
Sbjct: 684 AASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVS 743
Query: 210 WNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WNAMI Y+ HG ++ALD F++M V+P+H+T VGVLSACS GL D+G +FESM
Sbjct: 744 WNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMN 803
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+Y + P +HY C+VD+L +G L A D I++M ++PD VW LL++C +H ++++
Sbjct: 804 TEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIG 863
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
E A L+ELEP D+ YV+LSN+YA W+ R+ M ++G+KK SWIEVKN
Sbjct: 864 EFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNS 923
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
H+F GD +HP DEI+ K L R E GYV S+ +++ ++K I HSE+L
Sbjct: 924 IHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTIFIHSEKL 983
Query: 449 AIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
AI+FGL++ P + + KNL++C+DCH IKF+SK++ REI VRD R+HHF+ G CSC
Sbjct: 984 AISFGLLSLPATMPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACSC 1043
Query: 509 GDYW 512
DYW
Sbjct: 1044 KDYW 1047
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 171/372 (45%), Gaps = 40/372 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + + L++LY+ C + A F N+ LWNV++ AY + +
Sbjct: 401 LGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRI 460
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ +VP+ +T+P LK C L +E G +IH +I+ ++ + +V + LIDMYAK
Sbjct: 461 FRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAK 520
Query: 121 CS-----------------------------------CVVNARQVFDKILERDPSEATLV 145
+ RQ+ D+ + D E L
Sbjct: 521 LGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD--EVGLT 578
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+SA A + AL +G+++H + F ++ + ALV +Y+KCG ++ A FEQ
Sbjct: 579 NAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAG 638
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF 264
++WNA+++G+ G++ +AL +F +M E + ++ TF + A S +G+
Sbjct: 639 DNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQ-V 697
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+++ D + ++ + G + +A +++ +K + W A++N+ HG
Sbjct: 698 HAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVS-WNAMINAYSKHGF 756
Query: 325 VKLAELALEKLI 336
A + +++I
Sbjct: 757 GSEALDSFDQMI 768
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 160/351 (45%), Gaps = 40/351 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G G ++ L+ LYS + A ++FD + ++ W +I + N AI L+
Sbjct: 200 GLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLF 259
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ +G++P + F L AC + ++E G ++H V++ + +D +V AL+ +Y
Sbjct: 260 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHL 319
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+++A +F + +RD P TL +++
Sbjct: 320 GSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLV 379
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A + L G++LH ++ + F N K++ AL+++YAKC ++ A N F + + VV
Sbjct: 380 VACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVV 439
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
WN M+ Y + + +F +M+ +E+ P+ T+ +L C R G + G +
Sbjct: 440 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 499
Query: 268 VRDYHIDPSVQHYTC--MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
++ + Y C ++D+ G+LD A D++++ K D W ++
Sbjct: 500 IKTSF---QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMI 546
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 182/425 (42%), Gaps = 71/425 (16%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + L+ KL+ Y L A ++FD +P+R +F WN +I+ A L
Sbjct: 97 LGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCL 156
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALS-AIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
+ R++ + P+ TF L+AC S A + +IH +I V LID+Y+
Sbjct: 157 FGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYS 216
Query: 120 KCSCVVNARQVFDKILERD---------------------------------PSEATLVT 146
+ V AR+VFD + +D P+ +
Sbjct: 217 RNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSS 276
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V+SA I +L G +LHG + F + V ALV +Y G + A ++F + ++
Sbjct: 277 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRD 336
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V++N +I G + G+ KA++LF++M+ D ++PD T ++ ACS G G+
Sbjct: 337 AVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHA 396
Query: 266 SMVR---------------------------DYHIDPSVQHYTCMVDLLGHSGRLDE--- 295
+ +Y ++ V++ +L G LD+
Sbjct: 397 YTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRN 456
Query: 296 ACDLIMQMRVK---PDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYV--ILS 350
+ + QM+++ P+ + ++L +C G ++L E ++I+ YV +L
Sbjct: 457 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK-TSFQLNAYVCSVLI 515
Query: 351 NIYAR 355
++YA+
Sbjct: 516 DMYAK 520
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 128/316 (40%), Gaps = 50/316 (15%)
Query: 68 GLVPDNFTFPFALKAC-SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
G+ P++ T + L+ C +++EGR++H +++ ++ + + L+D Y +
Sbjct: 62 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDG 121
Query: 127 ARQVFDKILER---------------------------------DPSEATLVTVISA-SA 152
A +VFD++ ER P+E T V+ A
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG 181
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
A ++H + V L+D+Y++ G V AR +F+ L K SW A
Sbjct: 182 GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVA 241
Query: 213 MITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
MI+G + + +A+ LF M + P F VLSAC + + G +++
Sbjct: 242 MISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK-- 299
Query: 272 HIDPSVQHYTC--MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+ S Y C +V L H G L A + M + D + L+N G+ E
Sbjct: 300 -LGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQR-DAVTYNTLINGLSQCGY---GE 354
Query: 330 LALE-----KLIELEP 340
A+E +L LEP
Sbjct: 355 KAMELFKRMQLDGLEP 370
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/588 (34%), Positives = 320/588 (54%), Gaps = 77/588 (13%)
Query: 2 GFGFH------PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYE 55
GF F P + T L+ +Y+AC ++ A +FD + QR++ WN +I Y G +
Sbjct: 138 GFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLD 197
Query: 56 VAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALI 115
A +L+ + + ++PD + AC + R I++ +I N D + AL+
Sbjct: 198 EAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALV 257
Query: 116 DMYAKCSC-------------------------------VVNARQVFDKILERD------ 138
MYA C + +AR +FD+ +D
Sbjct: 258 TMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTT 317
Query: 139 ----------PSEA-----------------TLVTVISASADIAALPQGRELHGFSWRHR 171
P EA T+++VISA ++ L + + +H ++ +
Sbjct: 318 MISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNG 377
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
E + + AL++MYAKCG + AR++FE++ + VVSW++MI +AMHG ++ +L LF
Sbjct: 378 LESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFA 437
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+MK E V+P+ +TFVGVL CS GL +EG+ F SM +Y+I P ++HY CMVDL G +
Sbjct: 438 QMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRA 497
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
L EA ++I M + P+ +WG+L+++C++HG ++L ELA +++++LEP G V++S
Sbjct: 498 NLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLMS 557
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
NIYAR W+ V +R +M + + K S I++ K+H FL GD H +EIY KL
Sbjct: 558 NIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNEIYTKLY 617
Query: 411 WLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTR------LL 464
+ ++K AGYVP SV DVE +EK +++ HSE+LA+ FGL+N +
Sbjct: 618 EVVSKLKLAGYVPDGGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNKEKEEEKGSCGVIR 677
Query: 465 ITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I KNL++C+DCH K +SK+ E EI VRD R+H +KDG+CSC DYW
Sbjct: 678 IVKNLRVCEDCHAFFKLVSKVYELEIIVRDRTRFHRYKDGLCSCRDYW 725
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 161/385 (41%), Gaps = 70/385 (18%)
Query: 26 AHQLFDRI-PQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
A LF I P ++N L+R + +G I Y R+ +G D +FP LKA S
Sbjct: 66 ALNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVS 125
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------ 138
+SA+ EG +H + +D FV L+DMYA C + AR VFD++ +RD
Sbjct: 126 KVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNT 185
Query: 139 ---------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHR 171
P E L ++SA + R ++ F +
Sbjct: 186 MIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIEND 245
Query: 172 FELNVKVKTALVDMYA-------------------------------KCGLVKVARNLFE 200
++ + TALV MYA K G + AR +F+
Sbjct: 246 VRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFD 305
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDE 259
Q K +V W MI+ YA H +AL +FE+M ++PD +T + V+SAC G D+
Sbjct: 306 QTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDK 365
Query: 260 GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC 319
+ + ++ + ++++ G LD A D+ +M + + W +++N+
Sbjct: 366 AK-WVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTR-NVVSWSSMINAF 423
Query: 320 KLHGHV--KLAELALEKLIELEPHD 342
+HG L+ A K +EP++
Sbjct: 424 AMHGEASDSLSLFAQMKQENVEPNE 448
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/490 (40%), Positives = 286/490 (58%), Gaps = 11/490 (2%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +LF +P++N W+ ++ Y G + A+E +Y ++ T+ +
Sbjct: 154 ARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVI----TWTAMITGYMK 209
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER--DPSEAT 143
+E R+ +++ T A+I Y + + ++F +LE P+ +
Sbjct: 210 FGRVELAERLFQEMSMRTLVT----WNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALS 265
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
L +V+ ++++AL G+++H + + T+LV MY+KCG +K A LF Q+
Sbjct: 266 LTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIP 325
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRM 262
K VV WNAMI+GYA HG KAL LF++MK E ++PD ITFV VL AC+ GL D G
Sbjct: 326 RKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQ 385
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
+F +M RD+ I+ +HY CMVDLLG +G+L EA DLI M KP P ++G LL +C++H
Sbjct: 386 YFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIH 445
Query: 323 GHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSW 382
++ LAE A + L+EL+P A YV L+N+YA W+ VA +R+ M D + K SW
Sbjct: 446 KNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSW 505
Query: 383 IEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMIC 442
IE+ + H F S D HP I+ KLK LE +MK AGYVP E V HDV + K ++
Sbjct: 506 IEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLL 565
Query: 443 CHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFK 502
HSE+LAIAFGL+ P G + + KNL++C DCH A K+IS I REI VRD R+HHFK
Sbjct: 566 WHSEKLAIAFGLLKVPLGVPIRVFKNLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFK 625
Query: 503 DGICSCGDYW 512
DG CSC DYW
Sbjct: 626 DGFCSCRDYW 635
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 149/324 (45%), Gaps = 20/324 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWN-GPYEVAIELYYRLLE 66
+ + KL+ Y C + +A ++F+ + ++ WN ++ A+A G +E A +L+ ++ +
Sbjct: 42 IASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKIPQ 101
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
P+ ++ L + + R + + DV +I A+ +
Sbjct: 102 ----PNTVSYNIMLACHWHHLGVHDARGFFDSMPLK----DVASWNTMISALAQVGLMGE 153
Query: 127 ARQVFDKILERD-PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
AR++F + E++ S + +V+ A D+ A + + R +V TA++
Sbjct: 154 ARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVEC--FYAAPMR-----SVITWTAMITG 206
Query: 186 YAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITF 244
Y K G V++A LF+++ + +V+WNAMI GY +G + L LF M + V+P+ ++
Sbjct: 207 YMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSL 266
Query: 245 VGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
VL CS G+ + +V + T +V + G L +A +L +Q+
Sbjct: 267 TSVLLGCSNLSALQLGKQVHQ-LVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIP 325
Query: 305 VKPDPGVWGALLNSCKLHGHVKLA 328
K D W A+++ HG K A
Sbjct: 326 RK-DVVCWNAMISGYAQHGAGKKA 348
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 6/177 (3%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
T LV +YS C L +A +LF +IP++++ WN +I YA +G + A+ L+ + + GL
Sbjct: 301 GTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGL 360
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRN-KWETDVFVGAALIDMYAKCSCVVNAR 128
PD TF L AC+ ++ G + + R+ ET A ++D+ + + A
Sbjct: 361 KPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAV 420
Query: 129 QVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
+ K + P A T++ A + + L F+ ++ EL+ + T V +
Sbjct: 421 DLI-KSMPFKPHPAIYGTLLGA----CRIHKNLNLAEFAAKNLLELDPTIATGYVQL 472
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 13/135 (9%)
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMH-GHSTKALDLFEKM 233
NV L+ Y +CG + A +FE ++ K V+WN+++ +A GH A LFEK+
Sbjct: 40 NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKI 99
Query: 234 KDEVQPDHITFVGVLSACSRGGL-FDEGRMFFESM-VRDYHIDPSVQHYTCMVDLLGHSG 291
QP+ +++ ++ AC L + R FF+SM ++D V + M+ L G
Sbjct: 100 P---QPNTVSY-NIMLACHWHHLGVHDARGFFDSMPLKD------VASWNTMISALAQVG 149
Query: 292 RLDEACDLIMQMRVK 306
+ EA L M K
Sbjct: 150 LMGEARRLFSAMPEK 164
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/542 (37%), Positives = 295/542 (54%), Gaps = 35/542 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L +Y A +LF R+ ++++ W +I Y +N + AI+ Y
Sbjct: 327 GFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTY 386
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + + PD T L AC+ L ++ G +H+ I+ + + V V LI+MY+KC
Sbjct: 387 RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKC 446
Query: 122 SCVVNARQVFDKILERD--------------------------------PSEATLVTVIS 149
C+ A +F I ++ P+ TL ++
Sbjct: 447 KCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALA 506
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A A I AL G+E+H R L+ + AL+DMY +CG + A + F ++K V S
Sbjct: 507 ACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTS 565
Query: 210 WNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WN ++TGY+ G + ++LF++M K V+PD ITF+ +L CS+ + +G M+F M
Sbjct: 566 WNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM- 624
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
DY + P+++HY C+VDLLG +G L EA I +M V PDP VWGALLN+C++H + L
Sbjct: 625 EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLG 684
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
EL+ + + EL+ G Y++L N+YA W VAK+R++M + G+ CSW+EVK K
Sbjct: 685 ELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGK 744
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
HAFLS D HP EI L+ +M E G +ES D + + C HSER
Sbjct: 745 VHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERK 804
Query: 449 AIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
AIAFGLINT G + +TKNL +C++CH +KFISK REI+VRD +HHFKDG CSC
Sbjct: 805 AIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSC 864
Query: 509 GD 510
GD
Sbjct: 865 GD 866
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 139/273 (50%), Gaps = 35/273 (12%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV-PDNFTFPFALK 81
L +A +F ++ +RNLF WNVL+ YA G ++ A+ LY+R+L +G V PD +TFP L+
Sbjct: 145 LVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLR 204
Query: 82 ACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER---- 137
C + + G+ +H V+R +E D+ V ALI MY KC V +AR +FD++ R
Sbjct: 205 TCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIIS 264
Query: 138 -----------------------------DPSEATLVTVISASADIAALPQGRELHGFSW 168
DP TL +VISA + GR++H +
Sbjct: 265 WNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVI 324
Query: 169 RHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALD 228
F +++ V +L MY G + A LF ++ K +VSW MI+GY + KA+D
Sbjct: 325 TTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAID 384
Query: 229 LFEKM-KDEVQPDHITFVGVLSACSRGGLFDEG 260
+ M +D V+PD IT VLSAC+ G D G
Sbjct: 385 TYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 159/370 (42%), Gaps = 38/370 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ + L+ +Y C + +A LFDR+P+R++ WN +I Y NG +EL+
Sbjct: 226 GYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELF 285
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + + + PD T + AC L GR IH VI + D+ V +L MY
Sbjct: 286 FAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNA 345
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
A ++F ++ +D P E T+ V+
Sbjct: 346 GSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVL 405
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A + L G ELH + + R V V L++MY+KC + A ++F + K V+
Sbjct: 406 SACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVI 465
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
SW ++I G ++ +AL +MK +QP+ IT L+AC+R G G+ ++
Sbjct: 466 SWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVL 525
Query: 269 RD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
R +D + + ++D+ GR++ A K D W LL G +
Sbjct: 526 RTGVGLDDFLPN--ALLDMYVRCGRMNTAWSQFNSQ--KKDVTSWNILLTGYSERGQGSM 581
Query: 328 AELALEKLIE 337
+++++
Sbjct: 582 VVELFDRMVK 591
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 161/379 (42%), Gaps = 91/379 (24%)
Query: 51 NGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFV 110
NG E A++L + E+ + D F ++ C A EEG +++ + + V +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 111 GAALIDMYAKCSCVVNARQVFDKILERD-------------------------------- 138
G A + M+ + +V+A VF K+ ER+
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 139 --PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
P T V+ I L +G+E+H R+ +EL++ V AL+ MY KCG VK AR
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACS--- 252
LF+++ + ++SWNAMI+GY +G + L+LF M+ V PD +T V+SAC
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 253 --------------------------------RGGLFDEGRMFFESMVRDYHIDPSVQHY 280
G + E F M R + +
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER-----KDIVSW 366
Query: 281 TCMVDLLGHSGRLDEACD---LIMQMRVKPDPGVWGALLNSCKLHGH----VKLAELALE 333
T M+ ++ D+A D ++ Q VKPD A+L++C G V+L +LA++
Sbjct: 367 TTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIK 426
Query: 334 -KLIELEPHDAGNYVILSN 351
+LI +YVI++N
Sbjct: 427 ARLI--------SYVIVAN 437
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 100/255 (39%), Gaps = 46/255 (18%)
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
A +G +++ + L V++ A + M+ + G + A +F ++ E+ + SWN ++
Sbjct: 109 AQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVG 168
Query: 216 GYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSAC------SRG------------- 254
GYA G+ +A+ L+ +M V+PD TF VL C +RG
Sbjct: 169 GYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYE 228
Query: 255 ----------------GLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
G R+ F+ M R + + M+ +G E +
Sbjct: 229 LDIDVVNALITMYVKCGDVKSARLLFDRMPR-----RDIISWNAMISGYFENGMCHEGLE 283
Query: 299 LIMQMR---VKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE-PHDAGNYVILSNIYA 354
L MR V PD +++++C+L G +L +I D L+ +Y
Sbjct: 284 LFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYL 343
Query: 355 RAANWEGVAKLRKLM 369
A +W KL M
Sbjct: 344 NAGSWREAEKLFSRM 358
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/462 (40%), Positives = 287/462 (62%), Gaps = 35/462 (7%)
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
++ + G IH VIR+ + + ++V +L+ +YA C V +A +VFDK+ E+D
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 139 ---------PSEA-----------------TLVTVISASADIAALPQGRELHGFSWRHRF 172
P EA T+V+++SA A I AL G+ +H + +
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
N+ L+D+YA+CG V+ A+ LF+++ +K VSW ++I G A++G +A++LF+
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 233 MK--DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
M+ + + P ITFVG+L ACS G+ EG +F M +Y I+P ++H+ CMVDLL +
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
G++ +A + I M ++P+ +W LL +C +HG LAE A ++++LEP+ +G+YV+LS
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLS 300
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
N+YA W V K+RK M+ G+KK S +EV N+ H FL GD SHP D IYAKLK
Sbjct: 301 NMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLK 360
Query: 411 WLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLK 470
+ GR++ GYVP +V+ DVE +EK N + HSE++AIAF LI+TP+ + + + KNL+
Sbjct: 361 EMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLR 420
Query: 471 ICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+C DCH+AIK +SK+ REI VRD +R+HHFK+G CSC DYW
Sbjct: 421 VCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 137/266 (51%), Gaps = 16/266 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + L+HLY+ C + +A+++FD++P+++L WN +I +A NG E A+ LY
Sbjct: 18 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 77
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ PD FT L AC+ + A+ G+R+H +I+ ++ L+D+YA+C
Sbjct: 78 TEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC 137
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRE-LHGFSWRHRFELNVKVKT 180
V A+ +FD++++++ T + V +A G+E + F + E + +
Sbjct: 138 GRVEEAKTLFDEMVDKNSVSWTSLIV-----GLAVNGFGKEAIELFKYMESTEGLLPCEI 192
Query: 181 ALVD-MYA--KCGLVKVARNLFEQLREK-----RVVSWNAMITGYAMHGHSTKALDLFEK 232
V +YA CG+VK F ++RE+ R+ + M+ A G KA + +
Sbjct: 193 TFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKS 252
Query: 233 MKDEVQPDHITFVGVLSACSRGGLFD 258
M +QP+ + + +L AC+ G D
Sbjct: 253 MP--MQPNVVIWRTLLGACTVHGDSD 276
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/550 (36%), Positives = 312/550 (56%), Gaps = 40/550 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWN-GPYEVAIEL 60
G ++ LV +Y C + ++F+ + ++ WN ++ A + P ++++
Sbjct: 514 GLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQV 573
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ +++ GLVP+ TF L A + LS +E G++IH ++++ D V AL+ YAK
Sbjct: 574 FSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAK 633
Query: 121 CSCVVNARQVFDKILERDPS----------------------------------EATLVT 146
V + ++F ++ R + T
Sbjct: 634 SGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSI 693
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V++A A +AAL +G E+H F R E +V V++ALVDMY+KCG + A +F + +K
Sbjct: 694 VLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKN 753
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFE 265
SWN+MI+GYA HG KAL++FE+M++ + PDH+TFV VLSACS GL + G +FE
Sbjct: 754 EFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFE 813
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH- 324
++ DY I P ++HY+C++DLLG +G LD+ + + +M +KP+ +W +L +C+ H
Sbjct: 814 -LMEDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHR 872
Query: 325 --VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSW 382
+ L A L+ELEP + NYV+ S +A WE AK R M +KK SW
Sbjct: 873 AKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSW 932
Query: 383 IEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMIC 442
+ + + H F++GD SHPN EIY KL +L +++ AGYVP TE V HD+E + K ++
Sbjct: 933 VTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNAGYVPLTEYVLHDLEEENKEELLR 992
Query: 443 CHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFK 502
HSE+LA+AF L + G + I KNL++C DCH A ++IS+I R+I +RD R+HHFK
Sbjct: 993 YHSEKLAVAFVLTRSSSGGPIRIMKNLRVCGDCHTAFRYISQIVGRQIILRDSIRFHHFK 1052
Query: 503 DGICSCGDYW 512
DG CSCGDYW
Sbjct: 1053 DGKCSCGDYW 1062
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 160/373 (42%), Gaps = 55/373 (14%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE-- 66
LA LV+ Y+ L A ++FD +P RN W LI + +G E A L+ +L
Sbjct: 102 LANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRAMLREG 161
Query: 67 IGLVPDNFTFPFALKAC--SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC- 123
G P +FTF L+AC S + ++H V + ++ ++ V ALI MY CS
Sbjct: 162 PGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVG 221
Query: 124 -VVNARQVFDKILERD-------------------------------------PSEATLV 145
+ A++VFD RD P+E T
Sbjct: 222 PPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFG 281
Query: 146 TVISA----SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
++I+A S + L Q L + ++ V +ALV +A+ G++ A++++
Sbjct: 282 SLITATYLSSCSLGLLDQ---LFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLG 338
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDE-- 259
L+E+ V+ N +I G H A ++F +D + T+V +LSA + ++
Sbjct: 339 LKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGL 398
Query: 260 --GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
GR ++R HI + +V++ G +D+AC + M + D W ++
Sbjct: 399 RKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEAR-DRISWNTIIT 457
Query: 318 SCKLHGHVKLAEL 330
+ +G+ + A +
Sbjct: 458 ALDQNGYCEAAMM 470
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 160/363 (44%), Gaps = 53/363 (14%)
Query: 3 FGFHPVLATKLVHLYSACDCLHN--AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
F + + L+ +Y +C A ++FD P R+L WN L+ YA G L
Sbjct: 201 FTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTL 260
Query: 61 Y----YRLLEIGLVPDNFTFPFALKACSALSAIEEG--RRIHEDVIRNKWETDVFVGAAL 114
+ Y I L P TF +L + LS+ G ++ V+++ +D++VG+AL
Sbjct: 261 FRAMQYDDSGIELRPTEHTFG-SLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSAL 319
Query: 115 IDMYAKCSCVVNARQVFDKILERDP---------------SEA----------------- 142
+ +A+ + A+ ++ + ER+ EA
Sbjct: 320 VSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVD 379
Query: 143 TLVTVISASADIA----ALPQGRELHGFSWR--HRFELNVKVKTALVDMYAKCGLVKVAR 196
T V ++SA A+ + L +GRE+H R H + + V LV+MYAKCG + A
Sbjct: 380 TYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYR-KIAVSNGLVNMYAKCGAIDKAC 438
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGG 255
+F+ + + +SWN +IT +G+ A+ + M+ + + P + + LS+C+ G
Sbjct: 439 RVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLG 498
Query: 256 LFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGA 314
L G+ V+ ++D SV + +V + G GR+ E ++ M D W +
Sbjct: 499 LLAAGQQLHCDAVKWGLYLDTSVSN--ALVKMYGECGRMSECWEIFNSMSAH-DVVSWNS 555
Query: 315 LLN 317
++
Sbjct: 556 IMG 558
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 150/365 (41%), Gaps = 52/365 (14%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ + LV ++ L A ++ + +RN N LI E A E++ +
Sbjct: 315 VGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSA 374
Query: 69 LVPDNFTFPFALKACSALSAIEEG----RRIHEDVIR-NKWETDVFVGAALIDMYAKCSC 123
V + T+ L A + S E+G R +H V+R + V L++MYAKC
Sbjct: 375 AVNVD-TYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGA 433
Query: 124 VVNARQVFDKILERD---------------------------------PSEATLVTVISA 150
+ A +VF + RD PS ++ +S+
Sbjct: 434 IDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSS 493
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
A + L G++LH + + L+ V ALV MY +CG + +F + VVSW
Sbjct: 494 CAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSW 553
Query: 211 NAMITGYA-MHGHSTKALDLFEK-MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
N+++ A T+++ +F MK + P+ +TFV L+A + + + G+ M+
Sbjct: 554 NSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVML 613
Query: 269 R-----DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+ D +D ++ SG +D L +M + D W ++++ +G
Sbjct: 614 KHGVTEDNAVD------NALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNG 667
Query: 324 HVKLA 328
H++ A
Sbjct: 668 HLQEA 672
>gi|225463123|ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/515 (39%), Positives = 303/515 (58%), Gaps = 40/515 (7%)
Query: 33 IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
IP + +N L+R A GP+ + L L PD TF F+L A + A+ E
Sbjct: 64 IPHPSTNDFNALLRGLA-RGPHPTHALTF---LSTILHPDALTFSFSLIASARALALSET 119
Query: 93 RRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPS------------ 140
+IH ++R D+ +G LID YAKC + +A++VFD+I RD +
Sbjct: 120 SQIHSHLLRRGCHADILLGTTLIDAYAKCGDLDSAQRVFDEIPLRDVAAWNALIAGLAQG 179
Query: 141 ---------------------EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
E +++ ++A + + AL G +H + ++NV+V
Sbjct: 180 SKSSEALALFNRMRAEGEKINEISVLGALAACSQLGALRAGEGVHACVRKMDLDINVQVC 239
Query: 180 TALVDMYAKCGLVKVARNLFEQLR-EKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEV 237
A++DMYAKCG +F + K VV+WN MI +AMHG +AL+LFE+M K +V
Sbjct: 240 NAVIDMYAKCGFADKGFRVFSTMTCGKSVVTWNTMIMAFAMHGDGCRALELFEEMGKTQV 299
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
+ D +T++ VL AC+ GL +EG F+ MV ++ +V+HY +VDLLG +GRL EA
Sbjct: 300 EMDSVTYLAVLCACNHAGLVEEGVRLFDEMV-GRGVNRNVKHYGSVVDLLGRAGRLGEAY 358
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAA 357
+I M + PD +W +LL +CK +G+V++AE+A KL+E+ + G++V+LSN+YA
Sbjct: 359 RIINSMPIVPDVVLWQSLLGACKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARE 418
Query: 358 NWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK 417
WE V ++R+ M R ++K S+IEV+ H F++GD SHP+ EIYAKL + R+K
Sbjct: 419 RWEDVGRVREAMKSRDVRKVPGFSYIEVEGVIHKFVNGDQSHPDWREIYAKLDEIRFRIK 478
Query: 418 EAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHI 477
GYV T V HD+ ++K N +C HSE+LA+AFGLI+T +GT + + KNL+IC DCH+
Sbjct: 479 AFGYVAETSLVLHDIGEEDKENALCHHSEKLAVAFGLISTSEGTPIRVNKNLRICGDCHV 538
Query: 478 AIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
IK ISKI ++EI VRD R+H FKDG CSC DYW
Sbjct: 539 VIKLISKIYDQEIIVRDRARFHRFKDGSCSCRDYW 573
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 116/265 (43%), Gaps = 7/265 (2%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+L T L+ Y+ C L +A ++FD IP R++ WN LI A A+ L+ R+
Sbjct: 136 LLGTTLIDAYAKCGDLDSAQRVFDEIPLRDVAAWNALIAGLAQGSKSSEALALFNRMRAE 195
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G + + AL ACS L A+ G +H V + + +V V A+IDMYAKC
Sbjct: 196 GEKINEISVLGALAACSQLGALRAGEGVHACVRKMDLDINVQVCNAVIDMYAKCGFADKG 255
Query: 128 RQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYA 187
+VF + S T T+I A A + EL + + E++ A++
Sbjct: 256 FRVFST-MTCGKSVVTWNTMIMAFAMHGDGCRALELFEEMGKTQVEMDSVTYLAVLCACN 314
Query: 188 KCGLVKVARNLFEQL----REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHIT 243
GLV+ LF+++ + V + +++ G +A + M + PD +
Sbjct: 315 HAGLVEEGVRLFDEMVGRGVNRNVKHYGSVVDLLGRAGRLGEAYRIINSMP--IVPDVVL 372
Query: 244 FVGVLSACSRGGLFDEGRMFFESMV 268
+ +L AC G + M +V
Sbjct: 373 WQSLLGACKTYGNVEMAEMASRKLV 397
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/539 (38%), Positives = 308/539 (57%), Gaps = 43/539 (7%)
Query: 17 YSACDCLHNAHQLFDRIPQ---RNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDN 73
YS L A ++F + + R+ WN +I A + A+ L+ ++ GL D
Sbjct: 184 YSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDM 243
Query: 74 FTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS-CVVNARQVFD 132
FT L A + + + GR+ H +I++ + + VG+ LID+Y+KC+ +V R+VF+
Sbjct: 244 FTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFE 303
Query: 133 KILERD----------------------------------PSEATLVTVISASADIAALP 158
+I D P + + V V SA +++++
Sbjct: 304 EITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPS 363
Query: 159 QGRELHGFSWRHRFELN-VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
G+++H + + N V V ALV MY+KCG V AR +F+ + E VS N+MI GY
Sbjct: 364 LGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGY 423
Query: 218 AMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
A HG ++L LFE M + ++ P+ ITF+ VLSAC G +EG+ +F M + I+P
Sbjct: 424 AQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPE 483
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
+HY+CM+DLLG +G+L EA +I M P W LL +C+ HG+V+LA A + +
Sbjct: 484 AEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFL 543
Query: 337 ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGD 396
LEP++A YV+LSN+YA AA WE A +++LM +RG+KK CSWIE+ K H F++ D
Sbjct: 544 RLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAED 603
Query: 397 ASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVF---HDVENDEKANMICCHSERLAIAFG 453
SHP EI+ + + +MK+AGYVP +VE DE+ + HSE+LA+AFG
Sbjct: 604 TSHPMIKEIHVYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERERRLLYHSEKLAVAFG 663
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LI+T +G +L+ KNL+IC DCH A+K IS +T REITVRD +R+H FK+G CSC DYW
Sbjct: 664 LISTEEGVPILVVKNLRICGDCHNAVKLISALTGREITVRDTHRFHCFKEGHCSCRDYW 722
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
LV +YS C +H+A ++FD +P+ N N +I YA +G ++ L+ +LE + P+
Sbjct: 388 LVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPN 447
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYAKCSCVVNARQV 130
+ TF L AC +EEG++ + ++++ ++ E + + +ID+ + + A ++
Sbjct: 448 SITFIAVLSACVHTGKVEEGQK-YFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERI 506
Query: 131 FDKILERDPSEATLVTVISA 150
+ + +P T++ A
Sbjct: 507 IE-TMPFNPGSIEWATLLGA 525
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 38/178 (21%)
Query: 75 TFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI 134
TF LKAC A + G+ +H ++ ++ +Y+KC + NA+ F
Sbjct: 11 TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFH-- 68
Query: 135 LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV 194
L + P NV L++ YAK L+ +
Sbjct: 69 LTQYP-----------------------------------NVFSYNTLINAYAKHSLIHI 93
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSAC 251
AR +F+++ + +VS+N +I YA G L LFE++++ + D T GV++AC
Sbjct: 94 ARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFTLSGVITAC 151
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/546 (36%), Positives = 311/546 (56%), Gaps = 36/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G H + LV++YS C A ++ D +P +L +++ + Y G ++ +++
Sbjct: 166 GLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVL 225
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ V +N T+ +L+ S L + ++H ++R + +V ALI+MY KC
Sbjct: 226 RKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKC 285
Query: 122 SCVVNARQVFDKI---------------------------------LERDPSEATLVTVI 148
V+ A++VFD E P+E T ++
Sbjct: 286 GKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILL 345
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
++ A+++ L QG LHG + + +V V ALV+MYAK G ++ AR F + + +V
Sbjct: 346 NSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIV 405
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
+WN MI+G + HG +AL+ F++M E+ P+ ITF+GVL ACS G ++G +F
Sbjct: 406 TWNTMISGCSHHGLGREALEAFDRMIFTGEI-PNRITFIGVLQACSHIGFVEQGLHYFNQ 464
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
+++ + + P +QHYTC+V LL +G +A D + ++ D W LLN+C + + +
Sbjct: 465 LMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYR 524
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
L + E IE P+D+G YV+LSNI+A++ WEGVAK+R LM +RG+KK SWI ++
Sbjct: 525 LGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIR 584
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
N+ H FL+ D HP IYAK+K + ++K GY P FHDV+ +++ + + HSE
Sbjct: 585 NQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSE 644
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LA+A+GLI TP+ + L +TKN++ICDDCH AIK ISKI++R I +RD NR+HHF DG C
Sbjct: 645 KLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQC 704
Query: 507 SCGDYW 512
SC DYW
Sbjct: 705 SCCDYW 710
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 154/363 (42%), Gaps = 41/363 (11%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
L++LY C A +LFD +P+RN+ W +++ Y +G ++L+ + G
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 71 -PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
P+ F K+CS IEEG++ H ++ + FV L+ MY+ CS A +
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIR 192
Query: 130 VFDKILERDPSEATLVTVISASADIAALPQGREL------HGFSWRH------------- 170
V D + D S + +S + A +G ++ F W +
Sbjct: 193 VLDDLPYCDLS--VFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNL 250
Query: 171 --------------RFELNVKVKT--ALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
RF N +V+ AL++MY KCG V A+ +F+ + + ++
Sbjct: 251 RDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIM 310
Query: 215 TGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
Y +AL+LF KM EV P+ TF +L++ + L +G + +V
Sbjct: 311 DAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDL-LHGLVLKSGY 369
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
V +V++ SG +++A M + D W +++ C HG + A A +
Sbjct: 370 RNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHGLGREALEAFD 428
Query: 334 KLI 336
++I
Sbjct: 429 RMI 431
>gi|326524233|dbj|BAK00500.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 688
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/489 (42%), Positives = 294/489 (60%), Gaps = 15/489 (3%)
Query: 28 QLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALS 87
QLFD P R+ WN +I NG A++ Y + G+ +++T+ AL LS
Sbjct: 206 QLFDESPVRDTSSWNTIISGLMRNGCAAKALDRLYHMARAGVEFNHYTYSTALALAGMLS 265
Query: 88 AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTV 147
++ GR++H V+ + E D FV ++L+DMY KCS + A VF++ S T
Sbjct: 266 MLDLGRQLHGRVLTSALEADAFVRSSLMDMYCKCSSIKTAVLVFERW-----SHLTGDMK 320
Query: 148 ISASADIAALPQ-GRELHGFSWRHRFELNVKVK------TALVDMYAKCGLVKVARNLFE 200
+ S IA Q GRE F + R L V T+ V A G+V+ R +F+
Sbjct: 321 FAWSTMIAGYVQNGREEEAFEF-FRLMLCEGVAADQFTLTSAVAACANAGMVEQGR-MFD 378
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDE 259
K V W +M+ YA HG A+ LF +M E ++P+ +T VGVLSACS G L E
Sbjct: 379 IAPTKNVALWTSMLCSYASHGKGRMAIKLFNRMTAEKIKPNEVTLVGVLSACSHGRLVSE 438
Query: 260 GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC 319
G FF+ M +Y I PS++HY CMVDL G +G LD+A I + ++K + VW LL++C
Sbjct: 439 GEHFFKLMQEEYGIVPSIEHYNCMVDLYGRAGLLDKANIFINENKIKHESIVWKTLLSAC 498
Query: 320 KLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIA 379
++H ++ A+LA E LI+LE DAG+YV+LSN+YA + W +KLR LM++RG++K
Sbjct: 499 RVHKDMEHAKLASESLIQLEQCDAGSYVMLSNMYATHSKWRDTSKLRSLMLERGVRKQPG 558
Query: 380 CSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKAN 439
SWI +KN H F++GDA+HP EIY L+ L R+KE GY + V HDVE +++
Sbjct: 559 RSWIHLKNTVHTFVAGDAAHPRSSEIYTYLEKLMERLKELGYTSRIDLVAHDVEEEQRET 618
Query: 440 MICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYH 499
+ HSE+LA+AFG+I+TP GT L I KNL+IC DCH AIK++S+ T+REI VRD+ R+H
Sbjct: 619 ALKFHSEKLAMAFGIISTPSGTPLRIFKNLRICVDCHEAIKYVSRATDREIVVRDLYRFH 678
Query: 500 HFKDGICSC 508
HFKD CSC
Sbjct: 679 HFKDAKCSC 687
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 155/375 (41%), Gaps = 79/375 (21%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-EIGLVPDNFTFPFALK 81
H+A L D P+R+ W +I A G + + + +L E G P+ F L+
Sbjct: 68 FHDARWLLDETPKRSAAAWTAVIAGCARAGRHADGMGAFAEMLAEGGAAPNAFVLAAVLR 127
Query: 82 ACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK--------------------- 120
CS L +E G+RIH ++RN D + A++DMYAK
Sbjct: 128 CCSGLGDVESGKRIHGWLLRNGVHLDRVLCNAVLDMYAKSGDYELTKRAFRAMVEVDAVS 187
Query: 121 -----CSC-----VVNARQVFDKILERDPSE----------------------------- 141
+C ++ + Q+FD+ RD S
Sbjct: 188 WNIVISACLQSGDILGSTQLFDESPVRDTSSWNTIISGLMRNGCAAKALDRLYHMARAGV 247
Query: 142 ----ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
T T ++ + ++ L GR+LHG E + V+++L+DMY KC +K A
Sbjct: 248 EFNHYTYSTALALAGMLSMLDLGRQLHGRVLTSALEADAFVRSSLMDMYCKCSSIKTAVL 307
Query: 198 LFEQ---LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSR 253
+FE+ L +W+ MI GY +G +A + F M E V D T ++AC+
Sbjct: 308 VFERWSHLTGDMKFAWSTMIAGYVQNGREEEAFEFFRLMLCEGVAADQFTLTSAVAACAN 367
Query: 254 GGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM---RVKPDPG 310
G+ ++GRMF D +V +T M+ G+ A L +M ++KP+
Sbjct: 368 AGMVEQGRMF------DIAPTKNVALWTSMLCSYASHGKGRMAIKLFNRMTAEKIKPNEV 421
Query: 311 VWGALLNSCKLHGHV 325
+L++C HG +
Sbjct: 422 TLVGVLSACS-HGRL 435
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/505 (38%), Positives = 296/505 (58%), Gaps = 34/505 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ + LV LY+ C + A +FD +P R++ WN ++ AY N YE L+ ++ G
Sbjct: 302 VCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDG 361
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D T+ + C +E GR ++M+ K
Sbjct: 362 VRADEATWNAVIGGC-----MENGR-----------------SEEAVEMFRKM------- 392
Query: 129 QVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
+ + P+E T+ +++ A + L G+E+H + +RH ++ TAL+ MYAK
Sbjct: 393 ----QKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAK 448
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGV 247
CG + ++RN+F+ +R K VV+WN MI AMHG+ +AL LF+KM VQP+ +TF GV
Sbjct: 449 CGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGV 508
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
LS CS L +EG F SM RD+ ++P HY+C+VD+ +GRL+EA I M ++P
Sbjct: 509 LSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEP 568
Query: 308 DPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRK 367
WGALL +C+++ +V+LA+++ +KL E+EP++ GNYV L NI A W +++R
Sbjct: 569 TASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRI 628
Query: 368 LMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTES 427
LM +RGI K+ CSW++V NK H F+ GD S+ D+IY L L +MK AGY P T+
Sbjct: 629 LMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDY 688
Query: 428 VFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITE 487
V D++ +EKA +C HSE+LA+AFG++N + + + KNL+IC DCH AIK++SK+
Sbjct: 689 VLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVG 748
Query: 488 REITVRDVNRYHHFKDGICSCGDYW 512
I VRD R+HHFK+G CSC D W
Sbjct: 749 VIIVVRDSLRFHHFKNGNCSCKDLW 773
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 142/293 (48%), Gaps = 34/293 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L +L+ + + A QLFD IPQ + + LI A +G AI++Y L E G
Sbjct: 100 LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 159
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD F A KAC+ + +H+D R +DVFVG ALI Y KC CV AR
Sbjct: 160 IKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGAR 219
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+VFD ++ RD P+ T+ +++ A A++
Sbjct: 220 RVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELK 279
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L G+E+HGF+ RH +N+ V +ALV +YAKC V+ AR +F+ + + VVSWN ++T
Sbjct: 280 DLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLT 339
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
Y + K LF KM +D V+ D T+ V+ C G +E F M
Sbjct: 340 AYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKM 392
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/589 (37%), Positives = 327/589 (55%), Gaps = 83/589 (14%)
Query: 7 PVLATKLVHLYSACDC--LHNAHQLFDRIPQRNLFLWNVLIRAYA-WNGPYEVAIELYYR 63
P+ A +L+ + D L A ++F + + N F +N LIRA + N P + +
Sbjct: 43 PLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEM 102
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHE-------------------------- 97
+ + + P+ FTFP KAC + EGR++H
Sbjct: 103 VEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGV 162
Query: 98 -----------------DVIRNK---WETDVFVGAALIDMYAKCSCVVNARQVFDKILER 137
D IR+K + DV + +ID Y + + AR +FD++ +R
Sbjct: 163 MEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQR 222
Query: 138 D---------------------------------PSEATLVTVISASADIAALPQGRELH 164
P+ TLV+V+ A + + AL G+ +H
Sbjct: 223 SVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVH 282
Query: 165 GFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST 224
++ R+ ++ + +AL+DMYAKCG ++ A +FE L ++ VV+W+ +I G AMHG +
Sbjct: 283 LYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAK 342
Query: 225 KALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
LD FE M + V P +T++G+LSACS GL +EGR FF+ MVR ++P ++HY CM
Sbjct: 343 DTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCM 402
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDA 343
VDLLG +G L+E+ +LI+ M +KPD +W ALL +CK+HG+V++ + E L+EL PHD+
Sbjct: 403 VDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDS 462
Query: 344 GNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCD 403
G+YV LSNIYA NWEGVAK+R +M + ++K CSWIE+ H FL D SHP
Sbjct: 463 GSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSK 522
Query: 404 EIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRL 463
+I++ L+ + + GY P T V +++ ++K + + HSE++AIAFGLI+T T L
Sbjct: 523 KIHSMLQEMSRNLILVGYRPNTTQVLTNMDEEDKESSLNYHSEKIAIAFGLISTQPQTPL 582
Query: 464 LITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
ITKNL+IC+DCH +IK ISKI +R+I VRD R+HHF +G CSC DYW
Sbjct: 583 RITKNLRICEDCHSSIKLISKIYKRKIIVRDRKRFHHFVNGSCSCMDYW 631
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
G VL + L+ +Y+ C + A Q+F+ +P+RN+ W+ +I A +G + ++ +
Sbjct: 290 IGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFE 349
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR 101
+ G++P + T+ L ACS + EGR + ++R
Sbjct: 350 DMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVR 388
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/514 (36%), Positives = 301/514 (58%), Gaps = 3/514 (0%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + T L+ +Y L +A +FD + RN+F WN L+ Y++ G +E A+ L
Sbjct: 400 GFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLL 459
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ + G+ PD T+ + + +E + +V ALI ++
Sbjct: 460 NQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQA 519
Query: 122 SCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
++ + F ++ + P+ A++ ++ A A ++ L +G+E+H S R+ F +V V
Sbjct: 520 GNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVA 579
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQ 238
TAL+DMY+K +K A +F +++ K + SWN MI G+A+ G +A+ +F +M K V
Sbjct: 580 TALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVG 639
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
PD ITF +LSAC GL EG +F+SM+ DY I P ++HY CMVDLLG +G LDEA D
Sbjct: 640 PDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWD 699
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN 358
LI M +KPD +WGALL SC++H ++K AE A + L +LEP+++ NY+++ N+Y+
Sbjct: 700 LIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNR 759
Query: 359 WEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKE 418
WE + LR+LM G++ SWI++ + H F S + HP+ +IY +L L MK+
Sbjct: 760 WEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKK 819
Query: 419 AGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIA 478
GYVP V+ +++ EK ++ H+E+LAI +GLI G + + KN +IC DCH A
Sbjct: 820 LGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSA 879
Query: 479 IKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
K+IS + RE+ +RD R+HHF++G CSC D+W
Sbjct: 880 AKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 913
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 145/324 (44%), Gaps = 56/324 (17%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+ +YS L A ++FD + RN WN +I +YA G A L+Y L
Sbjct: 271 LCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSD 330
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIH---EDVIRNKWETDVFVGAALIDMYAKCSCVV 125
+ PD T+ + + G +H E+V+
Sbjct: 331 MKPDIVTW----------NCLLSGHFLHGYKEEVLN------------------------ 356
Query: 126 NARQVFDKILER------DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
IL+R P+ +++ +V+ A +++ L G+E HG+ R+ F+ +V V
Sbjct: 357 --------ILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVG 408
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQ 238
T+L+DMY K + A+ +F+ ++ + + +WN++++GY+ G AL L +M+ E ++
Sbjct: 409 TSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIK 468
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
PD +T+ G++S + G E + + P+V +T ++ +G ++
Sbjct: 469 PDLVTWNGMISGYAMWGCGKEALAVLHQ-TKSLGLTPNVVSWTALISGSSQAGNNRDSLK 527
Query: 299 LIMQMR---VKPDPGVWGALLNSC 319
QM+ V P+ LL +C
Sbjct: 528 FFAQMQQEGVMPNSASITCLLRAC 551
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 110/494 (22%), Positives = 208/494 (42%), Gaps = 93/494 (18%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWN-GPYEVAIELYYRLLEIG 68
A L+ Y +A +F RN WN + + + G + +E++ L G
Sbjct: 69 AKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKG 128
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+V D+ + ALK C+ + I G IH +I+ ++ DV++ AL++ Y +C + A
Sbjct: 129 VVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKAN 188
Query: 129 QVF------------DKILERDPSE---------------------ATLVTVISASADIA 155
QVF + I+ SE AT+V V+ A +
Sbjct: 189 QVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMG 248
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL +++HG+ +R + +V + L+ MY+K G +++AR +F+ + + SWN+MI+
Sbjct: 249 ALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMIS 308
Query: 216 GYA-----------------------------------MHGHSTKALDLFEKMKDE-VQP 239
YA +HG+ + L++ ++M+ E +P
Sbjct: 309 SYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKP 368
Query: 240 DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
+ + VL A S G + G+ ++R+ D V T ++D+ + L A +
Sbjct: 369 NSSSMTSVLQAISELGFLNMGKETHGYVLRN-GFDCDVYVGTSLIDMYVKNHSLTSAQAV 427
Query: 300 IMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHD-AGNYVILSNIYARAAN 358
M+ + + W +L++ G + E AL L ++E + V + + + A
Sbjct: 428 FDNMKNR-NIFAWNSLVSGYSFKG---MFEDALRLLNQMEKEGIKPDLVTWNGMISGYAM 483
Query: 359 W----EGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEG 414
W E +A L + G+ ++ SW A +SG + N + LK+
Sbjct: 484 WGCGKEALAVLHQTK-SLGLTPNVV-SWT-------ALISGSSQAGNNRD---SLKFF-A 530
Query: 415 RMKEAGYVPGTESV 428
+M++ G +P + S+
Sbjct: 531 QMQQEGVMPNSASI 544
>gi|449517497|ref|XP_004165782.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Cucumis sativus]
Length = 603
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/551 (38%), Positives = 306/551 (55%), Gaps = 39/551 (7%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + V L++ Y + AHQLFD +P N+ W L+ Y NG A+ L
Sbjct: 53 LGFLNNTVNVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQPSTALFL 112
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ +L +VP++FTF A+KACS LS + G H V + ++ V ++LIDMY K
Sbjct: 113 FGEMLRSPVVPNDFTFATAIKACSILSNLRHGEMFHAHVEIFGYGGNIVVCSSLIDMYGK 172
Query: 121 CSCVVNARQVFDKILERD----------------------------------PSEATLVT 146
C+ VV AR VF+ + ++ P+ L +
Sbjct: 173 CNDVVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEHPNPYMLAS 232
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
VISA A + L G+ +HG + + + V + LVDMYAKCG + + +F ++
Sbjct: 233 VISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDMYAKCGSLDYSDKVFNRISNPS 292
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V+ + +MI A +G K+L LFE+M + ++P+HIT VGVL ACS GL +EG +
Sbjct: 293 VIPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITLVGVLHACSHSGLPNEGLYYLT 352
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPG--VWGALLNSCKLHG 323
SM Y I P +HYTC+VD+L G LD+A DL M V PD +WGALL++ + HG
Sbjct: 353 SMYEKYGIMPETKHYTCVVDMLARVGELDKAFDLAKSMDVAPDDKALLWGALLSASRCHG 412
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
V +A A ++L+ AG YV LSN+YA A + E KLR M G+ K CSWI
Sbjct: 413 RVDIAAEACQQLVNSNRQVAGAYVTLSNVYASAGDMEKAHKLRVEMKRTGVHKEPGCSWI 472
Query: 384 EVKNKAHAFLSGD-ASHPNCDEIYAKLKWLEGRMKEAGYVPGTES-VFHDVENDEKANMI 441
E+K+ ++ F +G+ S DE+ L+ L+ +MK+ GYV G + VF D+E + + +
Sbjct: 473 EIKDSSYIFYAGEITSCARGDEVLCLLRELDQKMKDRGYVRGRKGLVFVDIEEEAEEEKV 532
Query: 442 CCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF 501
HSERLA+ FGLI+ P G + I KNL++C DCH A K IS+I ERE VRD+NR+HHF
Sbjct: 533 WLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFKLISEIMEREFVVRDINRFHHF 592
Query: 502 KDGICSCGDYW 512
K+G C+C +W
Sbjct: 593 KNGCCTCNGFW 603
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 7/223 (3%)
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
H + + F N L++ Y + + A LF+++ VVSW +++ GY +G
Sbjct: 47 HSIALKLGFLNNTVNVNHLINCYVRFRSIATAHQLFDEMPNPNVVSWTSLMAGYVDNGQP 106
Query: 224 TKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTC 282
+ AL LF E ++ V P+ TF + ACS G M F + V + ++ +
Sbjct: 107 STALFLFGEMLRSPVVPNDFTFATAIKACSILSNLRHGEM-FHAHVEIFGYGGNIVVCSS 165
Query: 283 MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHD 342
++D+ G + +A + M K + W +++ + + H A + L
Sbjct: 166 LIDMYGKCNDVVKARGVFNSMSCK-NIVSWTSMIAAYAQNAHGDEALKVFREFTSLSSEH 224
Query: 343 AGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
Y++ S I A A+ + +L + G S+ C EV
Sbjct: 225 PNPYMLASVISACAS----LGRLVSGKVMHGAAISLGCDSSEV 263
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/549 (39%), Positives = 309/549 (56%), Gaps = 45/549 (8%)
Query: 6 HPVLATKLV-HLYS----ACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
HP+LA L+ HL S L+ L +P + F N ++R A + +A+ L
Sbjct: 51 HPLLAKHLLFHLASLRAGPPPLLYAVTVLSCLLPDPDPFSLNTVLRIAASSAHPRIALAL 110
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R L PD T+P L+AC+ L A+ EG +H + +N VFV +L+ Y
Sbjct: 111 HRRRLA---PPDTHTYPPLLQACTRLLALREGESLHAEAAKNGLVALVFVKNSLVHHYGA 167
Query: 121 CSCVVNARQVFDKI--LERD---------------------------------PSEATLV 145
C +A +VFD+I LER+ P T+V
Sbjct: 168 CGLFESAHRVFDEIPVLERNLVSWNSVMNGFAANGRPNEVLTIFRETLEADLMPDGFTIV 227
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+V++A A+I AL GR +H F+ + N V AL+D+YAKCG V+ A +FE++
Sbjct: 228 SVLTACAEIGALTLGRRVHVFASKVGLVGNSHVGNALIDLYAKCGGVEDAWKVFEEMGVA 287
Query: 206 R-VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMF 263
R VVSW ++I G A +G AL+LF M+ E + P IT VGVL ACS GL D+G +
Sbjct: 288 RTVVSWTSLIVGLAGNGFGKDALELFGLMERERLIPTDITMVGVLYACSHCGLVDDGFRY 347
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
F M Y I P ++H CMVDLLG +GR++EA + I M V+P+ VW LL +C +H
Sbjct: 348 FNEMQDKYGIAPGIEHLGCMVDLLGRAGRVEEAHNYITTMPVEPNAVVWRTLLGACAMHK 407
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
++L E A +L+EL+P +G+YV+LSN+YA W LRK M G++K+ S +
Sbjct: 408 KLELGEAAWARLVELDPGHSGDYVLLSNLYAAVGRWADAHVLRKTMATHGVRKNPGHSLV 467
Query: 384 EVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICC 443
E++N + F+ GD SHP D+IY L + R++ GYVP T +V D+E +EK +
Sbjct: 468 ELRNSVYEFVMGDRSHPESDQIYQTLAEIAERLRCQGYVPRTSNVLADIEEEEKETALNY 527
Query: 444 HSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKD 503
HSERLAIAF L+ + G+ + I KNL++C DCH+ IK ISK+ +REI VRD +R+HHFK
Sbjct: 528 HSERLAIAFALLKSLPGSPIRIVKNLRMCGDCHLVIKLISKVYDREIIVRDRSRFHHFKG 587
Query: 504 GICSCGDYW 512
G CSC DYW
Sbjct: 588 GECSCKDYW 596
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/612 (33%), Positives = 319/612 (52%), Gaps = 101/612 (16%)
Query: 2 GFGFHPVLATKLVHLYSAC----DCLHNAHQLFDRIPQRN-------------------- 37
G G+ ++ LV +YS C LH+A ++FD IP+++
Sbjct: 179 GAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLG 238
Query: 38 ------------LFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
L +N +I Y G Y+ A+E+ R++ G+ D FT+P ++AC+
Sbjct: 239 KELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACAN 298
Query: 86 LSAIEEGRRIHEDVIR---------NKWET---------------------DVFVGAALI 115
++ G+++H V+R N T D+ AL+
Sbjct: 299 ARLLQLGKQVHAYVLRREDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALL 358
Query: 116 DMYAKCSCVVNARQVFDKILER---------------------------------DPSEA 142
Y + A+ +F ++ E+ +P +
Sbjct: 359 SGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDY 418
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
I + A + A G++ H + F+ ++ AL+ MYAKCG+V+ A+ +F +
Sbjct: 419 AFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTM 478
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGR 261
VSWNA+I HGH +A+D++E+M K ++PD ITF+ VL+ACS GL D+GR
Sbjct: 479 PCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGR 538
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
+F SM Y I P HY ++DLL SG+ EA +I + KP +W ALL+ C++
Sbjct: 539 KYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRV 598
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
HG+++L +A +KL L P G Y++LSN+YA WE VA++RKLM DRG+KK +ACS
Sbjct: 599 HGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACS 658
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVEND-EKANM 440
WIE++ + H FL D SHP + +Y L+ L M+ GYVP T V HDVE+D K +M
Sbjct: 659 WIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDM 718
Query: 441 ICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHH 500
+ HSE++A+AFGL+ P GT + I KNL+ C DCH +F+SK+ +R+I +RD R+HH
Sbjct: 719 LTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHH 778
Query: 501 FKDGICSCGDYW 512
F++G CSCG++W
Sbjct: 779 FRNGECSCGNFW 790
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 150/341 (43%), Gaps = 59/341 (17%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
T +V Y A + A +F+ P R+ ++N +I ++ N AI L+ ++ G
Sbjct: 84 TTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143
Query: 69 LVPDNFTFPFALKACSALSAIEEGR--RIHEDVIRNKWETDVFVGAALIDMYAKC----S 122
PD+FT+ L A AL +E + + H +++ V AL+ +Y++C S
Sbjct: 144 FKPDDFTYASVL-AGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPS 202
Query: 123 CVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
+ +AR+VFD I E+D SW T +
Sbjct: 203 LLHSARKVFDDIPEKDER--------------------------SW-----------TTM 225
Query: 183 VDMYAKCGLVKVARNLFEQLREK-RVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPD 240
+ Y K G + + L + + E ++V++NAMI+GY G +AL++ +M ++ D
Sbjct: 226 MTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELD 285
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVR----DYHIDPSVQHYTCMVDLLGHSGRLDEA 296
T+ V+ AC+ L G+ ++R +H D S +V L G+ +EA
Sbjct: 286 EFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHFDNS------LVTLYYKCGKFNEA 339
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+ +M K D W ALL+ GH+ A+L +++ E
Sbjct: 340 RAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIFKEMKE 379
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 42/176 (23%)
Query: 80 LKACSAL--SAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER 137
L+ C L ++++ R +H ++I ++ + LID+Y K S + ARQ+FD+I E
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEP 78
Query: 138 DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
D IA +T +V Y G + +AR+
Sbjct: 79 D--------------KIA-----------------------RTTMVSGYCASGDIALARS 101
Query: 198 LFEQ--LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSA 250
+FE+ + + V +NAMITG++ + A++LF KMK E +PD T+ VL+
Sbjct: 102 VFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAG 157
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF L+ +Y+ C + A Q+F +P + WN LI A +G A+++
Sbjct: 446 IGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDV 505
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIH---EDVIRNKWETDVFVGAALIDM 117
Y +L+ G+ PD TF L ACS +++GR+ E V R D + A LID+
Sbjct: 506 YEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHY--ARLIDL 563
Query: 118 YAKCSCVVNARQVFDKILERDPSE 141
+ A + + + + +E
Sbjct: 564 LCRSGKFSEAESIIESLPFKPTAE 587
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/501 (40%), Positives = 306/501 (61%), Gaps = 13/501 (2%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP-DNF 74
+Y+ + A FD P R++FL NV++ AY A +++ + LV +
Sbjct: 1 MYAKAGRVDLARDAFDEAPLRDVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTM 60
Query: 75 TFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI 134
+A++ L+ ++ + D F +++I YAK A +++ ++
Sbjct: 61 IHGYAMRGEVGLA---------REIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREM 111
Query: 135 LERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLV 192
P TLV+V+SA +D+ AL G E+H F +R EL++K+ TAL+DMYAKCG +
Sbjct: 112 HAASIIPDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDI 171
Query: 193 KVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSAC 251
+ A+ +F+++ EK V +W++MI G A HG ++L LF KM E ++P+ +TFVGVL AC
Sbjct: 172 ESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIAC 231
Query: 252 SRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV 311
+ GL EG+ +F SM + I+P+V+HY CMVDLLG SG ++EA LI M +PD +
Sbjct: 232 THVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTII 291
Query: 312 WGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMID 371
W ALL +C++H +V++AE A+ KL L+P G+YV+LSNIYA+A +WEGVA++RK +
Sbjct: 292 WRALLGACRIHKNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANSWEGVAEMRKTIRR 351
Query: 372 RGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHD 431
I++ S IE K H F+SGD HP EIY L+ + R+K+AGY P T V D
Sbjct: 352 DNIQRIPGRSSIEWDEKIHEFVSGDRLHPRSKEIYRVLEEMMDRLKQAGYKPMTGLVLQD 411
Query: 432 VENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREIT 491
++ K + HSE+LAIAF L+ TP + + ITKNL+ C+DCH A+K IS + +R++
Sbjct: 412 IDEQSKERSLAEHSEKLAIAFALLTTPARSTIRITKNLRACEDCHSAMKLISLVYDRKLI 471
Query: 492 VRDVNRYHHFKDGICSCGDYW 512
VRD NR+HHF +G CSC DYW
Sbjct: 472 VRDRNRFHHFSEGQCSCKDYW 492
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 35/257 (13%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
++H Y+ + A ++FD R+ F W+ +I AYA + + A+EL+ + ++PD
Sbjct: 60 MIHGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPD 119
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
T + ACS L A+ G +H V N+ E D+ +G ALIDMYAKC + +A++VFD
Sbjct: 120 CITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFD 179
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
++ E+D P+ T V V+ A + + +
Sbjct: 180 RMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSE 239
Query: 160 GRE-LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-EKRVVSWNAMITGY 217
G++ + H E V+ +VD+ + G V+ AR L + E + W A++
Sbjct: 240 GKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGAC 299
Query: 218 AMHGHSTKALDLFEKMK 234
+H + A + K++
Sbjct: 300 RIHKNVEIAEEAMAKLR 316
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T L+ +Y+ C + +A ++FDR+P++++ W+ +I A +G ++ L+ +++ G
Sbjct: 157 LGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEG 216
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIR-NKWETDVFVGAALIDMYAKCSCVVNA 127
+ P+ TF L AC+ + + EG++ + + E V ++D+ + V A
Sbjct: 217 MKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEA 276
Query: 128 RQVF 131
RQ+
Sbjct: 277 RQLI 280
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/545 (37%), Positives = 309/545 (56%), Gaps = 46/545 (8%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLF--LWNVLIRAYAWNGPYEVAIELYYR 63
P + T L+ +Y C + +A ++F+ PQ + +N LI Y N A ++ R
Sbjct: 87 EPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRR 146
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
+ E G+ D+ T + C+ + GR +H ++ +++V V + I MY KC
Sbjct: 147 MKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGS 206
Query: 124 VVNARQVFDKI-------------------LERD--------------PSEATLVTVISA 150
V R++FD++ L D P TLV+V+S+
Sbjct: 207 VEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSS 266
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
A + A G E+ + F NV V A + MYA+CG + AR +F+ + K +VSW
Sbjct: 267 CAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSW 326
Query: 211 NAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
AMI Y MHG L LF+ M K ++PD FV VLSACS GL D+G F +M R
Sbjct: 327 TAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKR 386
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+Y ++P +HY+C+VDLLG +GRLDEA + I M V+PD VWGALL +CK+H +V +AE
Sbjct: 387 EYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAE 446
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
LA K+IE EP++ G YV++SNIY+ + N EG+ ++R +M +R +K S++E K +
Sbjct: 447 LAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRV 506
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKE-AGYVPGTESVFHDVENDEKANMICC-HSER 447
H FL+GD SH +E++ L LE + E AG + D + E+ + HSER
Sbjct: 507 HLFLAGDRSHEQTEEVHRMLDELETSVMELAGNM--------DCDRGEEVSSTTREHSER 558
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFG++N+ GT +L+ KNL++C+DCH+ +K +SKI +R+ VRD +R+H+FKDG+CS
Sbjct: 559 LAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCS 618
Query: 508 CGDYW 512
C DYW
Sbjct: 619 CKDYW 623
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 168/352 (47%), Gaps = 48/352 (13%)
Query: 41 WNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVI 100
WNV +R A+ + +I LY +L G PD F+FPF LK+C++LS G+++H V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 101 RNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATL---------------- 144
+ ET+ FV ALI MY KC V +AR+VF E +P + L
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVF----EENPQSSQLSVCYNALISGYTANSK 136
Query: 145 ---------------VTVISAS----ADIAALPQ----GRELHGFSWRHRFELNVKVKTA 181
V+V S + + +P+ GR LHG + + V V +
Sbjct: 137 VTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNS 196
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPD 240
+ MY KCG V+ R LF+++ K +++WNA+I+GY+ +G + L+L+E+MK V PD
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPD 256
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
T V VLS+C+ G G + +V P+V + + G L +A +
Sbjct: 257 PFTLVSVLSSCAHLGAKKIGHEVGK-LVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHDAGNYVILS 350
M VK W A++ +HG ++ + + +I+ + P A ++LS
Sbjct: 316 DIMPVKSLVS-WTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLS 366
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF P ++ + +Y+ C L A +FD +P ++L W +I Y +G E+ + L+
Sbjct: 287 GFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLF 346
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR 101
+++ G+ PD F L ACS ++G + + R
Sbjct: 347 DDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKR 386
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/505 (38%), Positives = 296/505 (58%), Gaps = 34/505 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ + LV LY+ C + A +FD +P R++ WN ++ AY N YE L+ ++ G
Sbjct: 216 VCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDG 275
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D T+ + C +E GR ++M+ K
Sbjct: 276 VRADEATWNAVIGGC-----MENGR-----------------SEEAVEMFRKM------- 306
Query: 129 QVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
+ + P+E T+ +++ A + L G+E+H + +RH ++ TAL+ MYAK
Sbjct: 307 ----QKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAK 362
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGV 247
CG + ++RN+F+ +R K VV+WN MI AMHG+ +AL LF+KM VQP+ +TF GV
Sbjct: 363 CGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGV 422
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
LS CS L +EG F SM RD+ ++P HY+C+VD+ +GRL+EA I M ++P
Sbjct: 423 LSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEP 482
Query: 308 DPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRK 367
WGALL +C+++ +V+LA+++ +KL E+EP++ GNYV L NI A W +++R
Sbjct: 483 TASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRI 542
Query: 368 LMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTES 427
LM +RGI K+ CSW++V NK H F+ GD S+ D+IY L L +MK AGY P T+
Sbjct: 543 LMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDY 602
Query: 428 VFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITE 487
V D++ +EKA +C HSE+LA+AFG++N + + + KNL+IC DCH AIK++SK+
Sbjct: 603 VLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVG 662
Query: 488 REITVRDVNRYHHFKDGICSCGDYW 512
I VRD R+HHFK+G CSC D W
Sbjct: 663 VIIVVRDSLRFHHFKNGNCSCKDLW 687
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 143/295 (48%), Gaps = 34/295 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L +L+ + + A QLFD IPQ + + LI A +G AI++Y L E G
Sbjct: 14 LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 73
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD F A KAC+ + +H+D R +DVFVG ALI Y KC CV AR
Sbjct: 74 IKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGAR 133
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
+VFD ++ RD P+ T+ +++ A A++
Sbjct: 134 RVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELK 193
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L G+E+HGF+ RH +N+ V +ALV +YAKC V+ AR +F+ + + VVSWN ++T
Sbjct: 194 DLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLT 253
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
Y + K LF KM +D V+ D T+ V+ C G +E F M +
Sbjct: 254 AYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQK 308
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/542 (37%), Positives = 301/542 (55%), Gaps = 37/542 (6%)
Query: 4 GFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFH ++ LV +Y + A ++ +PQ + WN LI +A N A++ Y
Sbjct: 529 GFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAY 588
Query: 62 YRLLEIGLVPDNFTFPFALKACSALS-AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ E G+ + T L ACSA ++ G IH ++ +E+D +V +LI MYAK
Sbjct: 589 KLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAK 648
Query: 121 CSCVVNARQVFDKILERDP---------------------------------SEATLVTV 147
C + ++ +FD + + P + +
Sbjct: 649 CGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGG 708
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
++A+A++A L +G++LHG + FE ++ V A +DMY KCG + + Q +
Sbjct: 709 LAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSR 768
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
+SWN +I+ +A HG KA + F +M K +PDH+TFV +LSAC+ GGL DEG +++S
Sbjct: 769 LSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDS 828
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M R++ + P ++H C++DLLG SGRL A I +M V P+ W +LL +C++HG+++
Sbjct: 829 MTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLE 888
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
LA E L+EL+P D YV+ SN+ A + WE V LRK M IKK ACSW+++K
Sbjct: 889 LARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLK 948
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
+K H+F G+ HP I AKL L KEAGYVP T HD++ ++K + HSE
Sbjct: 949 DKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSE 1008
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
RLA+AFGLINTP+ + L I KNL++C DCH KF+S I R+I +RD R+HHF G C
Sbjct: 1009 RLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKC 1068
Query: 507 SC 508
SC
Sbjct: 1069 SC 1070
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 170/375 (45%), Gaps = 37/375 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + L+ LYS +A +F + +R+L WN ++ Y +G +++
Sbjct: 427 LGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKI 486
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
LL++G V ++ TF AL ACS + E + +H +I + + VG AL+ MY K
Sbjct: 487 LAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGK 546
Query: 121 CSCVVNARQVFDKILERD----------------PSEA-----------------TLVTV 147
++ A++V + + D P+EA T+V+V
Sbjct: 547 LGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSV 606
Query: 148 ISA-SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+ A SA L G +H FE + VK +L+ MYAKCG + + +F+ L K
Sbjct: 607 LGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKS 666
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
++WNAM+ A HG +AL +F +M++ V D +F G L+A + + +EG+
Sbjct: 667 PITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQ-LH 725
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
+V + + +D+ G G + + ++ Q + W L+++ HG
Sbjct: 726 GLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWNILISAFARHGCF 784
Query: 326 KLAELALEKLIELEP 340
+ A ++++L P
Sbjct: 785 QKARETFHEMLKLGP 799
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 157/339 (46%), Gaps = 37/339 (10%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+++YS + +A +FD + RN W+ ++ Y G YE A+ L+ ++ +G+ P+
Sbjct: 135 LINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPN 194
Query: 73 NFTFPFALKACSALSAI-EEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
F + ACS + +EG ++H V++ DV+VG AL+ Y V NA+++F
Sbjct: 195 GFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLF 254
Query: 132 DKILER----------------DPSEA-----------------TLVTVISASADIAALP 158
+++ + +P E T TV S+ +
Sbjct: 255 EEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQV 314
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
G ++ G ++ FE +V V +L+ M++ V+ A +F+ + E ++SWNAMI+ YA
Sbjct: 315 LGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYA 374
Query: 219 MHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
HG ++L F M+ + + T +LS CS GR +V +D +V
Sbjct: 375 HHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRG-IHGLVVKLGLDSNV 433
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
++ L +GR ++A +L+ Q + D W +++
Sbjct: 434 CICNTLLTLYSEAGRSEDA-ELVFQAMTERDLISWNSMM 471
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 155/346 (44%), Gaps = 44/346 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T LVH Y + ++NA +LF+ +P N+ W L+ Y+ +G + +Y R+ + G
Sbjct: 233 VGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEG 292
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ + TF +C L G ++ +I+ +E V V +LI M++ S V A
Sbjct: 293 VSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEAC 352
Query: 129 QVFDKI---------------------------------LERDPSEATLVTVISASADIA 155
VFD + L + + TL +++S + +
Sbjct: 353 YVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVD 412
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L GR +HG + + NV + L+ +Y++ G + A +F+ + E+ ++SWN+M+
Sbjct: 413 NLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMA 472
Query: 216 GYAMHGHSTKALDLFEKMKDEVQ----PDHITFVGVLSACSRGGLFDEGRMFFE-SMVRD 270
Y G K LD + + + +Q +H+TF L+ACS E ++ +V
Sbjct: 473 CYVQDG---KCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAG 529
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
+H V + +V + G G + EA ++Q +PD W AL+
Sbjct: 530 FHDFLIVGN--ALVTMYGKLGMMMEA-KKVLQTMPQPDRVTWNALI 572
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 78 FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER 137
F LK S +++ G+ +H I +F LI+MY+K + +AR VFD++ R
Sbjct: 99 FPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHR 158
Query: 138 DPSE------------------------------------ATLVTVISASADIAALPQGR 161
+ + A+L+T S S +A +G
Sbjct: 159 NEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMA--DEGF 216
Query: 162 ELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHG 221
++HGF + +V V TALV Y GLV A+ LFE++ + VVSW +++ GY+ G
Sbjct: 217 QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSG 276
Query: 222 HSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM--VRDYHIDPSVQ 278
+ + L+++++M+ E V + TF V S+C GL ++ + ++ + + Y + SV
Sbjct: 277 NPGEVLNVYQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQYGFEDSVS 333
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
++ + ++EAC + M + D W A++++ HG
Sbjct: 334 VANSLISMFSSFSSVEEACYVFDHMN-ECDIISWNAMISAYAHHG 377
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 132/285 (46%), Gaps = 34/285 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF +A L+ ++S+ + A +FD + + ++ WN +I AYA +G ++ +
Sbjct: 327 GFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCF 386
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + + ++ T L CS++ ++ GR IH V++ +++V + L+ +Y++
Sbjct: 387 HWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEA 446
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+A VF + ERD + T + +
Sbjct: 447 GRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASAL 506
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A ++ L + + +H F + V ALV MY K G++ A+ + + + + V
Sbjct: 507 AACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRV 566
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACS 252
+WNA+I G+A + +A+ ++ ++++ P ++IT V VL ACS
Sbjct: 567 TWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACS 611
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + + +Y C +H+ ++ + R+ WN+LI A+A +G ++ A E
Sbjct: 731 LGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARET 790
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG----AALID 116
++ +L++G PD+ TF L AC+ ++EG ++ + R E VF G +ID
Sbjct: 791 FHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTR---EFGVFPGIEHCVCIID 847
Query: 117 MYAKCSCVVNARQVFDKILERDPSEATLVTVISA 150
+ + + +A + F K + P++ ++++A
Sbjct: 848 LLGRSGRLSHA-EGFIKEMPVPPNDLAWRSLLAA 880
>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/507 (37%), Positives = 290/507 (57%), Gaps = 3/507 (0%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T LV +Y DCL A +F +N+ WN LI Y + G ++ A +L ++ E G
Sbjct: 405 VCTSLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEG 464
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D T+ + S EE + + +V A+I + +A
Sbjct: 465 IKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDAL 524
Query: 129 QVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
Q F ++ E + P+ T+ T++ A A + L +G E+H FS +H F ++ + TAL+DMY
Sbjct: 525 QFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMY 584
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFV 245
+K G +KVA +F ++EK + WN M+ GYA++GH + LF+ M K ++PD ITF
Sbjct: 585 SKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFT 644
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
+LS C GL +G +F+SM DY I+P+++HY+CMVDLLG +G LDEA D I M
Sbjct: 645 ALLSGCKNSGLVMDGWKYFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQ 704
Query: 306 KPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKL 365
K D +WGA+L +C+LH +K+AE+A L LEP+++ NYV++ NIY+ W V +L
Sbjct: 705 KADASIWGAVLAACRLHKDIKIAEIAARNLFRLEPYNSANYVLMMNIYSTFERWGDVERL 764
Query: 366 RKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGT 425
++ M G+K SWI+V+ H F + SHP EIY L L +K+ GYVP T
Sbjct: 765 KESMTAMGVKIPNVWSWIQVRQTIHVFSTEGKSHPEEGEIYFDLYQLISEIKKLGYVPDT 824
Query: 426 ESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKI 485
V ++++ EK ++ H+E+LA+ +GL+ GT + + KN +IC DCH A K+IS
Sbjct: 825 NCVHQNIDDSEKEKVLLSHTEKLAMTYGLMKIKGGTPIRVVKNTRICQDCHTAAKYISLA 884
Query: 486 TEREITVRDVNRYHHFKDGICSCGDYW 512
REI +RD R+HHF +G CSC D W
Sbjct: 885 RNREIFLRDGGRFHHFMNGECSCNDRW 911
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 123/250 (49%), Gaps = 35/250 (14%)
Query: 36 RNLFLWNVLIRAYA-WNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRR 94
RN LWN + +A + G +E++ L + G+ D+ LK C AL + G
Sbjct: 93 RNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVKFDSKALTVVLKICLALMELWLGME 152
Query: 95 IHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI-LERD--------------- 138
+H +++ ++ DV + ALI++Y KC + A QVFD+ L+ D
Sbjct: 153 VHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSER 212
Query: 139 -----------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
++ T+V ++ A + AL +G+++HG+ R N + +
Sbjct: 213 WEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNS 272
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPD 240
+V MY++ +++AR +F+ + + SWN++I+ YA++G A DLF +M+ ++PD
Sbjct: 273 IVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPD 332
Query: 241 HITFVGVLSA 250
IT+ +LS
Sbjct: 333 IITWNSLLSG 342
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 143/321 (44%), Gaps = 13/321 (4%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQR----NLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++ Y+ CL+ A LF + ++ WN L+ + G YE + L G
Sbjct: 304 IISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAG 363
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
PD+ + AL+A L G+ IH ++R+K E DV+V +L+DMY K C+ A
Sbjct: 364 FKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAE 423
Query: 129 QVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
VF ++ + ++IS +L + ++ +LV Y+
Sbjct: 424 VVFHHT--KNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSM 481
Query: 189 CGLVKVARNLFEQLRE----KRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHIT 243
G + A + +++ VVSW AMI+G + + T AL F +M++E V+P+ T
Sbjct: 482 SGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTT 541
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
+L AC+ L +G ++ +D + T ++D+ G+L A ++ +
Sbjct: 542 ISTLLRACAGPSLLKKGEEIHCFSMKHGFVD-DIYIATALIDMYSKGGKLKVAHEVFRNI 600
Query: 304 RVKPDPGVWGALLNSCKLHGH 324
+ K P W ++ ++GH
Sbjct: 601 KEKTLP-CWNCMMMGYAIYGH 620
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 147/341 (43%), Gaps = 44/341 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF L+ L++LY C + A+Q+FD P + FLWN ++ A + +E A+EL
Sbjct: 161 GFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSERWEDALELS 220
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+ + T L+AC L A+ EG++IH VIR ++ + +++ MY++
Sbjct: 221 RRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRN 280
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
+ + AR VFD + + + SW +
Sbjct: 281 NRLELARAVFDSTEDHNLA--------------------------SW-----------NS 303
Query: 182 LVDMYAKCGLVKVARNLFEQLREKR----VVSWNAMITGYAMHGHSTKALDLFEKMKDE- 236
++ YA G + A +LF ++ +++WN++++G+ + G L ++
Sbjct: 304 IISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAG 363
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+PD + L A G F+ G+ ++R ++ V T +VD+ + L++A
Sbjct: 364 FKPDSCSITSALQAVIELGYFNLGKEIHGYIMRS-KLEYDVYVCTSLVDMYIKNDCLEKA 422
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+++ + W +L++ G AE L ++ E
Sbjct: 423 -EVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKE 462
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF +AT L+ +YS L AH++F I ++ L WN ++ YA G E L+
Sbjct: 569 GFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLF 628
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ + G+ PD TF L C + +G
Sbjct: 629 DNMCKTGIRPDAITFTALLSGCKNSGLVMDG 659
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/583 (36%), Positives = 318/583 (54%), Gaps = 73/583 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQ-RNLFLWNVLIRAYAWNGPYEVAIEL 60
G + L L+H Y C L A +FD+ P +WN++I+AY+ + ++ L
Sbjct: 82 GLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYL 141
Query: 61 YYRLLEIG--LVPDNFTFPFALKACSALSAIEE-GRRIHEDVIRNKWETDVFVGAALIDM 117
++++L G D +TF F ACS + G +H V+++ +E+D+FVG +L++M
Sbjct: 142 FHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNM 201
Query: 118 -------------------------------YAKCSCVVNARQVFDKILERD-------- 138
YA +V AR++FD + R+
Sbjct: 202 YSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMV 261
Query: 139 --------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
P+EA LV+++SA A + AL QG+ +H + ++R
Sbjct: 262 AGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRI 321
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
L+ + TAL+DMYAKCG + AR +F+ L ++ +++W +MI+G +MHG + L F +
Sbjct: 322 LLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSE 381
Query: 233 MKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
M E +PD IT +GVL+ CS GL +EG F M+ + I P ++HY C++DLLG +G
Sbjct: 382 MLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAG 441
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHD-AGNYVILS 350
RL+ A + I M ++PD W ALL++C++HG V L E + + EL P G YV+LS
Sbjct: 442 RLESAFEAIKSMPMEPDVVAWRALLSACRIHGDVDLGERIINHIAELCPGSHGGGYVLLS 501
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
N+YA WE V K+RK M RG + CSWIE+ H FL+ D HP EI KL
Sbjct: 502 NLYASMGQWESVTKVRKAMSQRGSEGCPGCSWIEIDGVVHEFLAADKLHPRISEINKKLN 561
Query: 411 WLEGRMK-EAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNL 469
+ R+ E GYVP T+ V D+ ++K + HSE+LA+AFGL++T +GT + ITKNL
Sbjct: 562 EVLRRISIEGGYVPSTKQVLFDLNEEDKEQAVSWHSEKLAVAFGLLSTQEGT-IRITKNL 620
Query: 470 KICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ C+DCH A+K IS + REI VRD +R+H F+ G CSC DYW
Sbjct: 621 RTCEDCHSAMKTISLVFNREIVVRDRSRFHTFRYGNCSCTDYW 663
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
PS +T V ++ +L Q +++H H N + L+ Y C + AR +
Sbjct: 53 PSHSTFVQLLKKRP---SLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIV 109
Query: 199 FEQLRE-KRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQP---DHITFVGVLSACSR 253
F+Q + WN MI Y+ S ++L LF +M +P D TF V +ACSR
Sbjct: 110 FDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSR 168
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/545 (36%), Positives = 312/545 (57%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + + L+ +Y+ L A ++ R+P+ ++ W +I Y + + A++L+
Sbjct: 493 GFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLF 552
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G+ DN F A+ AC+ + A+ +G++IH + D+ + ALI +YA+C
Sbjct: 553 EEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARC 612
Query: 122 SCVVNARQVFDKILERDP-SEATLVTVISASA---------------------------- 152
+ A F+KI +++ S +LV+ ++ S
Sbjct: 613 GRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAI 672
Query: 153 ----DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A + QG+++H + ++ +V +L+ +YAK G + A F + E+ V+
Sbjct: 673 SAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVI 732
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNAMITGY+ HG +AL LFE+MK + P+H+TFVGVLSACS GL EG +FESM
Sbjct: 733 SWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESM 792
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+ + + P +HY C+VDLLG +G+LD A + I +M + D +W LL++C +H ++++
Sbjct: 793 FKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEI 852
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E A L+ELEP D+ YV++SNIYA + W RKLM D G+KK SWIEVKN
Sbjct: 853 GERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKN 912
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
HAF +GD HP ++IY + L R E GYV + S+ ++ E +K + HSE+
Sbjct: 913 AVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEK 972
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFGL++ + + + KNL++C+DCH IK++SKI+ R I VRD +R+HHF G+CS
Sbjct: 973 LAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCS 1032
Query: 508 CGDYW 512
C D+W
Sbjct: 1033 CKDFW 1037
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 172/374 (45%), Gaps = 40/374 (10%)
Query: 3 FGFHP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GFH + LV LYS L +A ++F + R+ +N LI G + A+EL
Sbjct: 290 WGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALEL 349
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ L PD T L AC+++ A+ +G ++H I+ D+ + +L+D+Y+K
Sbjct: 350 FTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSK 409
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C+ V A + F + P++ T ++
Sbjct: 410 CADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSI 469
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ + AL G ++H + F+LNV V + L+DMYAK G + +A + +L E V
Sbjct: 470 LRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDV 529
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF-E 265
VSW AMI GY H ++AL LFE+M+ +Q D+I F +SAC+ +G+ +
Sbjct: 530 VSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQ 589
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
S + D S+ + ++ L GR+ EA ++ K + W +L++ G+
Sbjct: 590 SYAAGFGADLSINN--ALISLYARCGRIQEAYLAFEKIGDKNNIS-WNSLVSGLAQSGYF 646
Query: 326 KLAELALEKLIELE 339
+ A +++ E
Sbjct: 647 EEALQVFVRMLRTE 660
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 131/294 (44%), Gaps = 35/294 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF P+L LV Y H A ++FD R++F WN +I + L+
Sbjct: 88 GFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLF 147
Query: 62 YRLLEIGLVPDNFTFPFALKACSALS-AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
R+L G+ P+ +TF LKAC A +++H +++ V LID+Y+K
Sbjct: 148 RRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSK 207
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ +A++VF+ I +D P+ L +V
Sbjct: 208 NGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSV 267
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+SAS I G +LH + F V LV +Y++ + A +F + +
Sbjct: 268 LSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDG 327
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEG 260
VS+N++I+G G S +AL+LF KM +D ++PD IT +LSAC+ G +G
Sbjct: 328 VSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKG 381
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 159/351 (45%), Gaps = 40/351 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF P++A L+ LYS + +A ++F+ I +++ W +I + NG E AI L+
Sbjct: 190 GFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLF 249
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + P + L A + + E G ++H VI+ + ++ +V L+ +Y++
Sbjct: 250 CDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRS 309
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+++A ++F + RD P T+ +++
Sbjct: 310 RKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLL 369
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A + AL +G +LH + + ++ ++ +L+D+Y+KC V+ A F + +V
Sbjct: 370 SACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIV 429
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
WN M+ Y + + + ++F +M+ E + P+ T+ +L C+ G G +
Sbjct: 430 LWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHV 489
Query: 268 VRDYHIDPSVQHYTC--MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
++ + Y C ++D+ G+L A ++ ++ + D W A++
Sbjct: 490 IK---TGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMI 536
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/502 (39%), Positives = 316/502 (62%), Gaps = 18/502 (3%)
Query: 13 LVHLY--SACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
LV LY C+C+ A +LFD + R++ WN LI Y ++G + A ++ ++E LV
Sbjct: 168 LVDLYFKVGCNCI--AQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLV 225
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDV-IRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
++ + + + +EE R++ E++ +RN V A+I YA+ +A +
Sbjct: 226 ----SWSTMISGYARVGNLEEARQLFENMPMRN-----VVSWNAMIAGYAQNEKYADAIE 276
Query: 130 VFDKILERD---PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
+F ++ P++ TLV+V+SA A + AL G+ +H F R++ E+ + + AL DMY
Sbjct: 277 LFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMY 336
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFV 245
AKCG V A+ +F ++ E+ V+SW+ +I G AM+G++ +A + F +M +D ++P+ I+F+
Sbjct: 337 AKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFM 396
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
G+L+AC+ GL D+G +F+ M + Y I P ++HY C+VDLL +GRLD+A LI M +
Sbjct: 397 GLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPM 456
Query: 306 KPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKL 365
+P+ VWGALL C+++ + E + +++EL+ + +G+ V L+N+YA + A
Sbjct: 457 QPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASC 516
Query: 366 RKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGT 425
R M D K+ CSWIE+ N + F GD+SHP IY+ ++ L+ +MK AGY P T
Sbjct: 517 RLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKT 576
Query: 426 ESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKI 485
+ V H+++ +EK + + HSE+LA+AFGLINT +GT + I KNL++C+DCH AIK ISKI
Sbjct: 577 DLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKI 636
Query: 486 TEREITVRDVNRYHHFKDGICS 507
EREI VRD +R+HHFKDG CS
Sbjct: 637 VEREIVVRDRSRFHHFKDGKCS 658
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 179/342 (52%), Gaps = 15/342 (4%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDR-IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
++A K + + S+ L ++ +F+ + N+F +N L++A++ + + I + L
Sbjct: 59 IIAVKFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLV 118
Query: 67 I--GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
+ PD +TF LKAC+ L+ + EG+++H V + E+++FV +L+D+Y K C
Sbjct: 119 LPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCN 178
Query: 125 VNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVD 184
A+++FD+++ RD + T+IS + + R + + E N+ + ++
Sbjct: 179 CIAQKLFDEMVVRDV--VSWNTLISGYCFSGMVDKARMV----FDGMMEKNLVSWSTMIS 232
Query: 185 MYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE--VQPDHI 242
YA+ G ++ AR LFE + + VVSWNAMI GYA + A++LF +M+ E + P+ +
Sbjct: 233 GYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDV 292
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
T V VLSAC+ G D G+ + +R I+ + + D+ G + EA + +
Sbjct: 293 TLVSVLSACAHLGALDLGK-WIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHE 351
Query: 303 MRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHD 342
M + D W ++ ++G+ A ++IE LEP+D
Sbjct: 352 MHER-DVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPND 392
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 120/224 (53%), Gaps = 15/224 (6%)
Query: 138 DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
+P E T +V+ A A +A + +G+++H F ++ E N+ V+ +LVD+Y K G +A+
Sbjct: 124 NPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQK 183
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLF 257
LF+++ + VVSWN +I+GY G KA +F+ M ++ + +++ ++S +R G
Sbjct: 184 LFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGM---MEKNLVSWSTMISGYARVGNL 240
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR----VKPDPGVWG 313
+E R FE+M +V + M+ + + +A +L QM+ + P+
Sbjct: 241 EEARQLFENMPM-----RNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLV 295
Query: 314 ALLNSCKLHGHVKLAELALEKLIELEPHDAGNYV--ILSNIYAR 355
++L++C G + L + + + I + G ++ L+++YA+
Sbjct: 296 SVLSACAHLGALDLGKW-IHRFIRRNKIEVGLFLGNALADMYAK 338
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L +Y+ C C+ A +F + +R++ W+++I A G A + ++E G
Sbjct: 328 LGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDG 387
Query: 69 LVPDNFTFPFALKACSALSAIEEG 92
L P++ +F L AC+ +++G
Sbjct: 388 LEPNDISFMGLLTACTHAGLVDKG 411
>gi|357111099|ref|XP_003557352.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 685
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/508 (41%), Positives = 301/508 (59%), Gaps = 28/508 (5%)
Query: 22 CLHN-----AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTF 76
C+ N + QLFD P R+ WN +I NG A++ YR+ +V +++T+
Sbjct: 189 CMQNGDILGSMQLFDVSPLRDTSSWNTVISGLMRNGCAAKALDCLYRMARARVVFNHYTY 248
Query: 77 PFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILE 136
AL LS + GR++H V+ +TD FV ++L+DMY KC + A +FD
Sbjct: 249 STALALAGMLSLQDLGRQLHGRVLTAAVDTDAFVRSSLMDMYCKCGSMETAVLIFDSW-- 306
Query: 137 RDPSEATLVTVISASADIAALPQ-GRELHGFSW----------RHRFELNVKVKTALVDM 185
S+ T + SA +A Q GRE F + H+F L T+ +
Sbjct: 307 ---SQLTGDMNFAWSAMVAGYVQNGREEEAFEFFRSMLREGVAAHQFTL-----TSAIAA 358
Query: 186 YAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITF 244
A G+V+ R +F++ K V W +M+ YA HG A++LF +M E + P+ IT
Sbjct: 359 CANAGMVEQGR-IFDRACAKNVALWTSMLCSYASHGKGRMAIELFNRMTAEKITPNEITL 417
Query: 245 VGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
VGVLSACS G L +EG FF+ M +Y I PS++HY CMVDL G +G L +A + I +
Sbjct: 418 VGVLSACSHGRLVNEGDHFFKLMQDEYGIVPSIEHYNCMVDLYGRAGMLYKAHNFIKENN 477
Query: 305 VKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAK 364
+K + VW LL++C+LH H++ A+LA E LI+LE DAG+YV+LSN+YA + W +K
Sbjct: 478 IKHEAIVWKTLLSACRLHKHMEYAKLASENLIQLEECDAGSYVMLSNVYATHSKWLDTSK 537
Query: 365 LRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPG 424
LR M +R + K SWI +KN H F++GD +HP EIYA L+ L R+K+ GY
Sbjct: 538 LRSSMRERRVWKQPGRSWIHLKNIMHTFVAGDTAHPRSAEIYAYLEKLMERLKDLGYTSR 597
Query: 425 TESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISK 484
T+ V HDVE +++ + HSE+LAIAFG+I+TP GT L I KNL++C DCH AIK++S+
Sbjct: 598 TDLVAHDVEEEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCVDCHEAIKYVSQ 657
Query: 485 ITEREITVRDVNRYHHFKDGICSCGDYW 512
T+REI VRD+ R+HHFKD CSC D+W
Sbjct: 658 ATDREIVVRDLYRFHHFKDAKCSCEDFW 685
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 156/375 (41%), Gaps = 79/375 (21%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL-LEIGLVPDNFTFPFALK 81
HNA +L D P+R+ W I A +G + + + + + G P+ F L+
Sbjct: 62 FHNARKLLDETPKRSASAWTAFIAGCARSGRHMDGLSAFTEMRAKGGAEPNAFVLAAVLR 121
Query: 82 ACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC-------------------- 121
C+ L +E G+ IH ++RN DV + A++DMYAKC
Sbjct: 122 CCAGLRDMESGKCIHGWMLRNGAHLDVVLCNAVLDMYAKCGDYECTKRAFKAMTKIDAVS 181
Query: 122 ------SCVVN-----ARQVFDKILERDPSE----------------------------- 141
+C+ N + Q+FD RD S
Sbjct: 182 WNIVISACMQNGDILGSMQLFDVSPLRDTSSWNTVISGLMRNGCAAKALDCLYRMARARV 241
Query: 142 ----ATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
T T ++ + ++ GR+LHG + + V+++L+DMY KCG ++ A
Sbjct: 242 VFNHYTYSTALALAGMLSLQDLGRQLHGRVLTAAVDTDAFVRSSLMDMYCKCGSMETAVL 301
Query: 198 LFE---QLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSR 253
+F+ QL +W+AM+ GY +G +A + F M ++ V T ++AC+
Sbjct: 302 IFDSWSQLTGDMNFAWSAMVAGYVQNGREEEAFEFFRSMLREGVAAHQFTLTSAIAACAN 361
Query: 254 GGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM---RVKPDPG 310
G+ ++GR+F D +V +T M+ G+ A +L +M ++ P+
Sbjct: 362 AGMVEQGRIF------DRACAKNVALWTSMLCSYASHGKGRMAIELFNRMTAEKITPNEI 415
Query: 311 VWGALLNSCKLHGHV 325
+L++C HG +
Sbjct: 416 TLVGVLSACS-HGRL 429
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/561 (36%), Positives = 318/561 (56%), Gaps = 66/561 (11%)
Query: 18 SACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFP 77
++ D L A +FD + + FLWN++IR ++ + E ++ LY R+L + +TFP
Sbjct: 89 TSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFP 148
Query: 78 FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDM-------------------- 117
LKACS LSA+EE +IH + + +E DV+ +LI+
Sbjct: 149 SLLKACSNLSALEETTQIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKP 208
Query: 118 -----------YAKCSCVVNARQVFDKILER----------------------------- 137
YAK + A +F K++E+
Sbjct: 209 DAVSWNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQ 268
Query: 138 ----DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVK 193
+P +L +SA A + AL QG+ +H + + R ++ + L+DMYAKCG +
Sbjct: 269 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMG 328
Query: 194 VARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACS 252
A +F+ ++ K V +W A+I+GYA HGH +A+ F +M K ++P+ ITF VL+ACS
Sbjct: 329 EALEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACS 388
Query: 253 RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
GL +EG++ F +M RDY++ P+++HY C+VDLL +G LDEA I +M +KP+ +W
Sbjct: 389 YTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIW 448
Query: 313 GALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDR 372
GALL +C++H +++L E E LI ++P+ G YV +NI+A W+ A+ R+LM ++
Sbjct: 449 GALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQ 508
Query: 373 GIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVP-GTESVFHD 431
G+ K CS I ++ H FL+GD SHP ++I +K K + +++E GYVP + +
Sbjct: 509 GVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWKIMRRKLEENGYVPELEDMLLDL 568
Query: 432 VENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREIT 491
V++DE+ ++ HSE+LAI +GLI T GT + I KNL++C DCH K ISKI +R+I
Sbjct: 569 VDDDERETIVHQHSEKLAITYGLIKTKPGTTIRIMKNLRVCKDCHKVTKLISKIYKRDIV 628
Query: 492 VRDVNRYHHFKDGICSCGDYW 512
+RD R+HHF+DG CSCGDYW
Sbjct: 629 MRDRTRFHHFRDGKCSCGDYW 649
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 156/346 (45%), Gaps = 42/346 (12%)
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWE-TDVFVGAALIDM 117
+++ R+L+ GL+ D++ L C +S+ + ++ + ++ D F+ +I
Sbjct: 61 QIHARMLKTGLIQDSYAITKFLSCC--ISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRG 118
Query: 118 YAKCSCVVNARQVFDKIL-ERDPSEA-TLVTVISASADIAALPQGRELHGFSWRHRFELN 175
++ + ++ ++L P A T +++ A ++++AL + ++H + +E +
Sbjct: 119 FSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYEND 178
Query: 176 VKVKTALVDM-------------------------------YAKCGLVKVARNLFEQLRE 204
V +L++ YAK G + +A LF ++ E
Sbjct: 179 VYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKMVE 238
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMF 263
K +SW MI+GY G +AL LF +M++ +V+PD+++ LSAC++ G ++G+ +
Sbjct: 239 KNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK-W 297
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
S + I ++D+ G + EA ++ ++ K W AL++ HG
Sbjct: 298 IHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRK-SVQAWTALISGYAYHG 356
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLM 369
H A+ K +E++ VI A ++ G+ + KL+
Sbjct: 357 H---GREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLI 399
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL L+ +Y+ C + A ++F I ++++ W LI YA++G AI + + ++
Sbjct: 312 VLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKM 371
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN 102
G+ P+ TF L ACS +EEG+ I ++ R+
Sbjct: 372 GIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERD 406
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/577 (34%), Positives = 316/577 (54%), Gaps = 71/577 (12%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P + T + +Y++C ++ A +FD + R++ WN +I Y G + A +L+ + +
Sbjct: 146 PFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKD 205
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETD------------------- 107
++PD + AC + R I+E +I N D
Sbjct: 206 SNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDM 265
Query: 108 ------------VFVGAALIDMYAKCSCVVNARQVFDKILERD----------------P 139
+FV A++ Y+KC + +A+ +FD+ ++D P
Sbjct: 266 AREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYP 325
Query: 140 SEA-----------------TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
EA ++ +VISA A++ L + + +H + E + + AL
Sbjct: 326 QEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNAL 385
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDH 241
++MYAKCG + R++FE++ + VVSW++MI +MHG ++ AL LF +MK E V+P+
Sbjct: 386 INMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNE 445
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
+TFVGVL CS GL +EG+ F SM +Y+I P ++HY CMVDL G + L EA ++I
Sbjct: 446 VTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIE 505
Query: 302 QMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEG 361
M V + +WG+L+++C++HG ++L + A ++++ELEP G V++SNIYAR WE
Sbjct: 506 SMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWED 565
Query: 362 VAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGY 421
V +R++M ++ + K S I+ K+H FL GD H +EIYAKL + ++K AGY
Sbjct: 566 VRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGY 625
Query: 422 VPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTR------LLITKNLKICDDC 475
VP SV DVE +EK +++ HSE+LA+ FGL+N + I KNL++C+DC
Sbjct: 626 VPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDC 685
Query: 476 HIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
H+ K +SK+ EREI VRD R+H +K+G+CSC DYW
Sbjct: 686 HLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 159/387 (41%), Gaps = 74/387 (19%)
Query: 26 AHQLFDRIPQR-NLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
A +F IP ++N +R + + I Y R+ +G D F+F LKA S
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------ 138
+SA+ EG +H + D FV +DMYA C + AR VFD++ RD
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 139 ---------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHR 171
P E L ++SA + R ++ F +
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 172 FELNVKVKTALVDMYA-------------------------------KCGLVKVARNLFE 200
++ + TALV MYA KCG + A+ +F+
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDE 259
Q +K +V W MI+ Y + +AL +FE+M ++PD ++ V+SAC+ G+ D+
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362
Query: 260 GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLN 317
+ + S + ++ + ++++ G LD D+ +M P V W +++N
Sbjct: 363 AK-WVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKM---PRRNVVSWSSMIN 418
Query: 318 SCKLHGHVK--LAELALEKLIELEPHD 342
+ +HG L+ A K +EP++
Sbjct: 419 ALSMHGEASDALSLFARMKQENVEPNE 445
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 128/259 (49%), Gaps = 20/259 (7%)
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
+ + ++ A + ++AL +G ELHG +++ + V+T +DMYA CG + ARN+F+++
Sbjct: 113 SFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEM 172
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR 261
+ VV+WN MI Y G +A LFE+MKD V PD + ++SAC R G R
Sbjct: 173 SHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNR 232
Query: 262 MFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
+E ++ D +D + T +V + +G +D A + +M V+ +++
Sbjct: 233 AIYEFLIENDVRMDTHL--LTALVTMYAGAGCMDMAREFFRKMSVR------NLFVSTAM 284
Query: 321 LHGHVKLAELALEKLI--ELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
+ G+ K L ++I + E D + + + Y + + ++ + M GIK +
Sbjct: 285 VSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDV 344
Query: 379 --------ACSWIEVKNKA 389
AC+ + + +KA
Sbjct: 345 VSMFSVISACANLGILDKA 363
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/569 (36%), Positives = 313/569 (55%), Gaps = 82/569 (14%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYA------------------------WNGPY------- 54
A QLFD IP+ ++F WN++ + Y+ + P+
Sbjct: 67 ARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTR 126
Query: 55 ----EVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHE-----DVIR---- 101
++ EL+ +++ GL + F + S I+ R I + DV+
Sbjct: 127 SVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAM 186
Query: 102 ----NKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------------------- 138
N+ + DV A++ + V AR+ F K+ ERD
Sbjct: 187 ISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKE 246
Query: 139 --------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVD 184
P E T+V+V++A A + AL G + + +++ + + V AL+D
Sbjct: 247 ALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALID 306
Query: 185 MYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHIT 243
MY KCG V++A ++F L ++ +W AM+ G A++G +AL++F +M K V PD +T
Sbjct: 307 MYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVT 366
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
+VGVLSAC+ G+ DEG+ FF SM + I+P++ HY CMVDLLG +G L EA ++I M
Sbjct: 367 YVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNM 426
Query: 304 RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVA 363
+KP+ VWGALL +C++H ++AE A+E+++ELEP++ YV+ NIYA W+ +
Sbjct: 427 PMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLR 486
Query: 364 KLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVP 423
+LR++M+DRGIKK+ CS IE+ H F++GD SHP EIY KL + +K AGY P
Sbjct: 487 ELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSP 546
Query: 424 GTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFIS 483
T VF D+ ++K N + HSE+LAIAFGLIN+ G + I KNL++C DCH K +S
Sbjct: 547 NTSEVFLDIAEEDKENAVYRHSEKLAIAFGLINSGPGVTIRIVKNLRMCIDCHHVAKLVS 606
Query: 484 KITEREITVRDVNRYHHFKDGICSCGDYW 512
K+ +RE+ VRD R+HHF+ G CSC DYW
Sbjct: 607 KVYDREVIVRDRTRFHHFRHGSCSCKDYW 635
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ +Y C + A +F+ +PQR+ F W ++ A NG E A+ ++ ++L+
Sbjct: 300 VGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKAS 359
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVI-RNKWETDVFVGAALIDMYAKCSCVVNA 127
+ PD T+ L AC+ ++EG++ + R+ E ++ ++D+ K + A
Sbjct: 360 VTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEA 419
Query: 128 RQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL---NVKVKTALVD 184
++ K + P+ ++ A + + E+ + EL N V +
Sbjct: 420 HEII-KNMPMKPNSIVWGALLGA----CRIHKDAEMAERAIEQILELEPNNGAVYVLQCN 474
Query: 185 MYAKCGLVKVARNLFEQLREKRVV 208
+YA C N +++LRE R V
Sbjct: 475 IYAAC-------NKWDKLRELRQV 491
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/530 (39%), Positives = 300/530 (56%), Gaps = 39/530 (7%)
Query: 21 DCLHNAHQLFDRIPQRNLFLWNVLIRAYA-WNGPYEVAIELYYRLLEIGLVPDNFTFPFA 79
+C +A ++F +P+ + WN +I A + A++ + +++ G TF
Sbjct: 385 ECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINI 444
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILE-RD 138
L A S+LS E +IH V++ D +G AL+ Y KC + ++F ++ E RD
Sbjct: 445 LSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRD 504
Query: 139 P---------------------------------SEATLVTVISASADIAALPQGRELHG 165
T T++SA A +A L +G E+H
Sbjct: 505 EVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHA 564
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
R E +V V +ALVDMY+KCG + A FE + + V SWN+MI+GYA HGH K
Sbjct: 565 CGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEK 624
Query: 226 ALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMV 284
AL LF +M D PDH+TFVGVLSACS G +EG F+SM Y + P V+H++CMV
Sbjct: 625 ALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMV 684
Query: 285 DLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC-KLHG-HVKLAELALEKLIELEPHD 342
DLLG +G+LDE D I M +KP+ +W +L +C + +G + +L A E L+ELEP +
Sbjct: 685 DLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQN 744
Query: 343 AGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNC 402
A NYV+L+N+YA WE VAK R M + +KK CSW+ +K+ H F++GD HP
Sbjct: 745 AVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEK 804
Query: 403 DEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTR 462
D IY KL+ L +M++AGY+P T+ D+E + K ++ HSE++A+AF ++
Sbjct: 805 DLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALP 863
Query: 463 LLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ I KNL++C DCH A +ISKI R+I +RD NR+HHF+DG CSCGDYW
Sbjct: 864 IRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 913
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 132/285 (46%), Gaps = 37/285 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+ L+++Y L +A +LFD + RNL W LI Y NG + A +
Sbjct: 129 GFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARF 188
Query: 62 YRLLEIGLVPDNFTFPFALKAC--SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
++ G +P+++ F AL+AC S S + G +IH + + ++ +DV V LI MY
Sbjct: 189 RDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYG 248
Query: 120 KCSCVVN-ARQVFDKILERDP-SEATLVTVISASADIAAL-------------------- 157
C N AR VFD I R+ S ++++V S D +
Sbjct: 249 SCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPND 308
Query: 158 ------------PQGRELHGFSWRHRFELN-VKVKTALVDMYAKCGLVKVARNLFEQLRE 204
+GRE+H R N V + LV+MYAK G + A ++FE + E
Sbjct: 309 AFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVE 368
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLS 249
K VSWN++I+G + S A ++F M + Q + +G LS
Sbjct: 369 KDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALS 413
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+ + LV +YS C + A + F+ +P RN++ WN +I YA +G E A++L+ R++
Sbjct: 576 VVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLD 635
Query: 68 GLVPDNFTFPFALKACSALSAIEEG 92
G PD+ TF L ACS + +EEG
Sbjct: 636 GQPPDHVTFVGVLSACSHVGFVEEG 660
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF 199
S T ++I+ + RELH S ++ F N+ + L+++Y + G + A+ LF
Sbjct: 98 SSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLF 157
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGG 255
+++ + +V+W +I+GY +G +A F M + P+H F L AC G
Sbjct: 158 DEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 214
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/535 (37%), Positives = 310/535 (57%), Gaps = 35/535 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
++H Y + + +A QLF ++P R++ W+ +I NG E A+ L+ ++ G+
Sbjct: 187 MIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLS 246
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIR-NKWETDVFVGAALIDMYAKC-----SCVV- 125
+ L A + + A G +IH V + W D FV A+L+ YA C +C V
Sbjct: 247 SGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVF 306
Query: 126 -------------------------NARQVFDKILERD--PSEATLVTVISASADIAALP 158
A +VF +++ D P+E++ + +++ + +
Sbjct: 307 GEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIE 366
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
+G+ +H + + E V +LV MY+KCG V A +F+ + EK VVSWN++I G A
Sbjct: 367 RGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCA 426
Query: 219 MHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
HG AL LF +M ++ V PD IT G+LSACS G+ + R FF + + ++
Sbjct: 427 QHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTI 486
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+HYT MVD+LG G L+EA ++M M +K + VW ALL++C+ H ++ LA+ A ++ E
Sbjct: 487 EHYTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIFE 546
Query: 338 LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDA 397
+EP + YV+LSN+YA ++ W VA +R+ M G+ K SW+ +K + H FLS D
Sbjct: 547 IEPDCSAAYVLLSNLYASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSADR 606
Query: 398 SHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINT 457
SHP ++IY KL+WL ++KE GYVP + HDVE ++K M+ HSERLAIAFGL++T
Sbjct: 607 SHPLAEKIYQKLEWLGVKLKELGYVPDQQFALHDVETEQKEEMLSYHSERLAIAFGLLST 666
Query: 458 PDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+G+ + + KNL++C DCH AIK ++KI +REI VRD +R+H FK+GICSCGDYW
Sbjct: 667 VEGSAITVMKNLRVCGDCHNAIKLMAKIVDREIVVRDSSRFHDFKNGICSCGDYW 721
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 141/315 (44%), Gaps = 16/315 (5%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
F ++ LV Y+ C + A ++F + +++ +W L+ Y N + A+E++ +
Sbjct: 281 FDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEM 340
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
+ I +VP+ +F AL +C L IE G+ IH ++ E+ +VG +L+ MY+KC V
Sbjct: 341 MRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYV 400
Query: 125 VNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVD 184
+A VF I E++ + +VI A L R + + T L+
Sbjct: 401 SDAVYVFKGINEKNV--VSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLS 458
Query: 185 MYAKCGLVKVARNLFEQLREKRVVS-----WNAMITGYAMHGHSTKALDLFEKMKDEVQP 239
+ G+++ AR F +KR V+ + +M+ G +A + M ++
Sbjct: 459 ACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMP--MKA 516
Query: 240 DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ-HYTCMVDLLGHSGRLDEACD 298
+ + ++ +LSAC + D + + + + I+P Y + +L S R E
Sbjct: 517 NSMVWLALLSACRKHSNLDLAK---RAANQIFEIEPDCSAAYVLLSNLYASSSRWAEVAL 573
Query: 299 LIMQMR---VKPDPG 310
+ +M+ V PG
Sbjct: 574 IRRKMKHNGVVKKPG 588
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 128/311 (41%), Gaps = 68/311 (21%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L A +FD+IP ++ L+ +++ AYA N AI+L+ R+ D ++ +K
Sbjct: 71 LDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRI----PFKDVVSWNSIIKG 126
Query: 83 CSALSAIEEGRRIHEDVIRN---KWET--------------------------DVFVGAA 113
C I R++ +++ R W T DV A
Sbjct: 127 CLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAMEPMDRDVAAWNA 186
Query: 114 LIDMYAKCSCVVNARQVFDKILERDP---------------------------------S 140
+I Y V +A Q+F ++ RD S
Sbjct: 187 MIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLS 246
Query: 141 EATLVTVISASADIAALPQGRELHGFSWR-HRFELNVKVKTALVDMYAKCGLVKVARNLF 199
LV +SA+A I A G ++H ++ + + V +LV YA C ++ A +F
Sbjct: 247 SGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVF 306
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFD 258
++ K VV W A++TGY ++ +AL++F E M+ +V P+ +F L++C +
Sbjct: 307 GEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIE 366
Query: 259 EGRMFFESMVR 269
G++ + V+
Sbjct: 367 RGKVIHAAAVK 377
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
+V + T ++ YA+ ++ A +LF ++ K VVSWN++I G G A LF++M
Sbjct: 85 HVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHCGDIVTARKLFDEMP 144
Query: 235 DEVQPDHITFV-GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
T V G+L R G+ E F +M +D V + M+ +GR+
Sbjct: 145 RRTVVSWTTLVDGLL----RLGIVQEAETLFWAM---EPMDRDVAAWNAMIHGYCSNGRV 197
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
D+A L QM + D W +++ +G + A + ++
Sbjct: 198 DDALQLFCQMPSR-DVISWSSMIAGLDHNGKSEQALVLFRDMV 239
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MG + LV +YS C + +A +F I ++N+ WN +I A +G A+ L
Sbjct: 378 MGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALAL 437
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
+ ++L G+ PD T L ACS +++ R
Sbjct: 438 FNQMLREGVDPDGITVTGLLSACSHSGMLQKAR 470
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/571 (35%), Positives = 313/571 (54%), Gaps = 67/571 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A L+H Y +C L +A ++F I ++++ WN +I + G + A+EL+ ++
Sbjct: 170 VANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESED 229
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA- 127
+ + T L AC+ + +E GRR+ + N+ ++ + A++DMY KC + +A
Sbjct: 230 VKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAK 289
Query: 128 ------------------------------RQVFDKILERD----------------PSE 141
R+V + + ++D P+E
Sbjct: 290 RLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNE 349
Query: 142 A------------------TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALV 183
A TLV+ +SA A + AL GR +H + ++ ++N V +AL+
Sbjct: 350 ALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALI 409
Query: 184 DMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHI 242
MY+KCG ++ AR +F + ++ V W+AMI G AMHG ++A+D+F KM++ V+P+ +
Sbjct: 410 HMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGV 469
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
TF V ACS GL DE F M Y I P +HY C+VD+LG SG L++A I
Sbjct: 470 TFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEA 529
Query: 303 MRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGV 362
M + P VWGALL +CK+H ++ LAE+A +L+ELEP + G +V+LSNIYA++ W+ V
Sbjct: 530 MPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNV 589
Query: 363 AKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYV 422
++LRK M G+KK CS IE+ H FLSGD +HP +++Y KL + ++K GY
Sbjct: 590 SELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYE 649
Query: 423 PGTESVFHDVENDE-KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKF 481
P V +E +E K + HSE+LAI +GLI+T + + KNL++C DCH K
Sbjct: 650 PEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKAIRVIKNLRMCGDCHAVAKL 709
Query: 482 ISKITEREITVRDVNRYHHFKDGICSCGDYW 512
IS++ REI VRD R+HHF++G CSC D+W
Sbjct: 710 ISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 184/393 (46%), Gaps = 74/393 (18%)
Query: 2 GFGFHPVLATKL--VHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV-AI 58
G P A+KL + S+ L A ++FD IPQ N F WN LIRAYA +GP V +I
Sbjct: 58 GMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYA-SGPDPVCSI 116
Query: 59 ELYYRLL--EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
+ ++ E P+ +TFPF +KA + +S++ G+ +H I++ +DVFV +LI
Sbjct: 117 WAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIH 176
Query: 117 MYAKCSCVVNARQVFDKILERD---------------------------------PSEAT 143
Y C + +A +VF I E+D S T
Sbjct: 177 CYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVT 236
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
+V V+SA A I L GR + + +R +N+ + A++DMY KCG ++ A+ LF+ +
Sbjct: 237 MVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME 296
Query: 204 E-------------------------------KRVVSWNAMITGYAMHGHSTKALDLFE- 231
E K +V+WNA+I+ Y +G +AL +F
Sbjct: 297 EKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHE 356
Query: 232 -KMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+++ ++ + IT V LSAC++ G + GR + S ++ I + + ++ +
Sbjct: 357 LQLQKNIKLNQITLVSTLSACAQVGALELGR-WIHSYIKKNGIKMNFYVTSALIHMYSKC 415
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
G L++A ++ + K D VW A++ +HG
Sbjct: 416 GDLEKAREVFNSVE-KRDVFVWSAMIGGLAMHG 447
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 139/266 (52%), Gaps = 13/266 (4%)
Query: 59 ELYYRLLEIGLVPDNFTFP--FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
+ + ++ G+ D ++ FA+ A S+ +++E R++ +++ + + F LI
Sbjct: 49 QTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIP----QPNSFTWNTLIR 104
Query: 117 MYAKCSCVVNARQVFDKILERD----PSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
YA V + F ++ + P++ T +I A+A++++L G+ LHG + +
Sbjct: 105 AYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAV 164
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
+V V +L+ Y CG + A +F ++EK VVSWN+MI G+ G KAL+LF+K
Sbjct: 165 GSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKK 224
Query: 233 MKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
M+ E V+ H+T VGVLSAC++ + GR S + + ++ ++ M+D+ G
Sbjct: 225 MESEDVKASHVTMVGVLSACAKIRDLEFGRRVC-SYIEENRVNVNLTLANAMLDMYTKCG 283
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLN 317
+++A L M K D W +L+
Sbjct: 284 SIEDAKRLFDAMEEK-DNVTWTTMLD 308
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/570 (37%), Positives = 303/570 (53%), Gaps = 65/570 (11%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+ + ++ L+ + A +LF+ + Q++L W+ LI Y N YE A+ L+ +
Sbjct: 224 IASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNAN 283
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G++ D L ACS L + G+ +H V++ ET V + ALI MY+ C VV A
Sbjct: 284 GIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTA 343
Query: 128 -------------------------------RQVFDKILERD------------------ 138
R +FD + ++D
Sbjct: 344 QKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFT 403
Query: 139 ---------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALV 183
P E LV+VISA +AAL QG+ +H + ++ ++N+ + T L+
Sbjct: 404 ETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLI 463
Query: 184 DMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHI 242
+MY K G V+ A +F+ L EK V +WNA+I G AM+G K+L F +MK+ V P+ I
Sbjct: 464 NMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEI 523
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
TFV VL AC GL DEG F SM++++ I P+++HY CMVDLLG +G L EA +LI
Sbjct: 524 TFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIES 583
Query: 303 MRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGV 362
M + PD WGALL +CK +G + E KL+EL P G V+LSNIYA NW V
Sbjct: 584 MPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDV 643
Query: 363 AKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYV 422
++R +M G+ K+ CS IE + H FL+GD +HP + I L + ++K GY
Sbjct: 644 LEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYA 703
Query: 423 PGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFI 482
P T V D++ +EK + HSE+LAIAFGLI T + I KNL+IC+DCH A K I
Sbjct: 704 PDTREVSLDIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRIVKNLRICNDCHTAAKLI 763
Query: 483 SKITEREITVRDVNRYHHFKDGICSCGDYW 512
SK REI VRD +R+HHFK G CSC DYW
Sbjct: 764 SKAFNREIVVRDRHRFHHFKQGSCSCMDYW 793
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 130/234 (55%), Gaps = 11/234 (4%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
++ ++Q+F I N F+ N +++ Y AI +Y +LE + DN+T+P ++
Sbjct: 76 INQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQS 135
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEA 142
CS A +G+ I + V++ +++DV++ LI+MYA C + +AR+VFD +
Sbjct: 136 CSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDG--------S 187
Query: 143 TLVTVISASADIAA--LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
+++ ++S ++ +A L E + E NV +++ ++ K G V+ A LF
Sbjct: 188 SVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFN 247
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSR 253
++++K +VSW+A+I+ Y + +AL LF++M + + D + + VLSACSR
Sbjct: 248 EMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSR 301
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 169/404 (41%), Gaps = 105/404 (25%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLF------------------------------ 30
+GF + L+++Y+ C L +A ++F
Sbjct: 155 VGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDV 214
Query: 31 -DRIPQRN-------------------------------LFLWNVLIRAYAWNGPYEVAI 58
DR+P+RN L W+ LI Y N YE A+
Sbjct: 215 YDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEAL 274
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
L+ + G++ D L ACS L + G+ +H V++ ET V + ALI MY
Sbjct: 275 ILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMY 334
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
+ C VV A+++F SE+ + I SW
Sbjct: 335 SSCEEVVTAQKLF--------SESCCLDQI------------------SW---------- 358
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-V 237
+++ Y KCG ++ AR LF+ + +K VSW+AMI+GYA T+ L LF++M+ E
Sbjct: 359 -NSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGT 417
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
+PD V V+SAC+ D+G+ + + +R + ++ T ++++ G +++A
Sbjct: 418 KPDETILVSVISACTHLAALDQGK-WIHAYIRKNGLKINIILGTTLINMYMKLGCVEDAL 476
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPH 341
++ + K W AL+ ++G L + +L+ E++ H
Sbjct: 477 EVFKGLEEK-GVSTWNALILGLAMNG---LVDKSLKTFSEMKEH 516
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + +L T L+++Y C+ +A ++F + ++ + WN LI A NG + +++ +
Sbjct: 451 GLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTF 510
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR-NKWETDVFVGAALIDMYAK 120
+ E G+ P+ TF L AC + ++EG R +I+ +K ++ ++D+ +
Sbjct: 511 SEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGR 570
Query: 121 CSCVVNARQVFDKI 134
+ A ++ + +
Sbjct: 571 AGMLKEAEELIESM 584
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/535 (37%), Positives = 301/535 (56%), Gaps = 37/535 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
+VH Y + +A +LF ++P +N+ W +I N A++L+ +L +
Sbjct: 165 MVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKST 224
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+ F + AC+ A G ++H +I+ + + +V A+LI YA C + ++R+VFD
Sbjct: 225 SRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFD 284
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
+ + P+++T + +++ + + L
Sbjct: 285 EKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDW 344
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G+E+HG + + E + V +LV MY+ G V A ++F ++ +K +VSWN++I G A
Sbjct: 345 GKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQ 404
Query: 220 HGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY-HIDPSV 277
HG A +F +M + +PD ITF G+LSACS G ++GR F M HID +
Sbjct: 405 HGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKI 464
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
QHYTCMVD+LG G+L EA +LI +M VKP+ VW ALL++C++H V E A +
Sbjct: 465 QHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFN 524
Query: 338 LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDA 397
L+ + YV+LSNIYA A W V+KLR M GI K SW+ ++ K H F SGD
Sbjct: 525 LDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD- 583
Query: 398 SHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINT 457
P+C IY KL++L ++KE GY P S HDVE+++K M+ HSERLAIAFGLINT
Sbjct: 584 -QPHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINT 642
Query: 458 PDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+G+ + + KNL++C+DCH IK IS + REI +RD R+HHFK+G CSCGDYW
Sbjct: 643 VEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 149/320 (46%), Gaps = 17/320 (5%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + ++ L+ Y+ C + ++ ++FD + +W L+ Y+ N +E A+ +
Sbjct: 254 LGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSI 313
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ +L ++P+ TF L +CSAL ++ G+ +H ++ ETD FVG +L+ MY+
Sbjct: 314 FSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSD 373
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
V +A VF KI ++ S + ++I A + G R E + T
Sbjct: 374 SGNVNDAVSVFIKIFKK--SIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFT 431
Query: 181 ALVDMYAKCGLVKVARNLFEQLR------EKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
L+ + CG ++ R LF + ++++ + M+ G +A +L E+M
Sbjct: 432 GLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMV 491
Query: 235 DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP-SVQHYTCMVDLLGHSGRL 293
V+P+ + ++ +LSAC D G ++ +++D S Y + ++ +GR
Sbjct: 492 --VKPNEMVWLALLSACRMHSDVDRGE---KAAAAIFNLDSKSSAAYVLLSNIYASAGRW 546
Query: 294 DEACDLIMQMR---VKPDPG 310
L ++M+ + PG
Sbjct: 547 SNVSKLRVKMKKNGIMKKPG 566
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 10/130 (7%)
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
+V + T ++ Y + + A NLF+++ + VVSWN+MI+G G A+ LF++M
Sbjct: 65 HVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP 124
Query: 235 DEVQPDHITFVGVLSACSRGGLFDEG-RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
+ +++ +++ C R G D+ R+F++ V+D + MV G++
Sbjct: 125 ER---SVVSWTAMVNGCFRSGKVDQAERLFYQMPVKD------TAAWNSMVHGYLQFGKV 175
Query: 294 DEACDLIMQM 303
D+A L QM
Sbjct: 176 DDALKLFKQM 185
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 14/136 (10%)
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRG 254
AR +F Q+ V + MITGY AL+LF++M D +++ ++S C
Sbjct: 54 AREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR---DVVSWNSMISGCVEC 110
Query: 255 GLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGA 314
G + F+ M + SV +T MV+ SG++D+A L QM VK D W +
Sbjct: 111 GDMNTAVKLFDEMP-----ERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK-DTAAWNS 164
Query: 315 LLNSCKLHGHVKLAEL 330
+ +HG+++ ++
Sbjct: 165 M-----VHGYLQFGKV 175
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 97/225 (43%), Gaps = 25/225 (11%)
Query: 107 DVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGF 166
DV ++I +C + A ++FD++ ER S + +++ + Q L
Sbjct: 96 DVVSWNSMISGCVECGDMNTAVKLFDEMPER--SVVSWTAMVNGCFRSGKVDQAERLF-- 151
Query: 167 SWRHRFELNVKVKTA---LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
+++ VK A +V Y + G V A LF+Q+ K V+SW MI G + S
Sbjct: 152 -----YQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERS 206
Query: 224 TKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-----DYHIDPSV 277
+ALDLF+ M + ++ F V++AC+ F G +++ + ++ S+
Sbjct: 207 GEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASL 266
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
+ +G S + + +V VW ALL+ L+
Sbjct: 267 ITFYANCKRIGDSRK-------VFDEKVHEQVAVWTALLSGYSLN 304
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/543 (37%), Positives = 318/543 (58%), Gaps = 35/543 (6%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GFG + LV++YS C + A ++FD + +++ LWN LI YA G ++A++L
Sbjct: 141 IGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQL 200
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDV-IRN--KWET----------- 106
+ + E D F++ + S +E R++ + + RN W
Sbjct: 201 FEEMPE----RDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDF 256
Query: 107 -------------DVFVGAALIDMYAKCSCVVNARQVFDKILE--RDPSEATLVTVISAS 151
D+ +I Y ++A ++F +L+ PS ATLV+V+SA
Sbjct: 257 DSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAV 316
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+ +A L +GR +H + ++ FEL+ + T+L++MYAKCG ++ A +F +++K+V W
Sbjct: 317 SGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWT 376
Query: 212 AMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
A+I G +HG + AL LF +M K ++P+ I F+GVL+AC+ GL D+GR +F+ M+ +
Sbjct: 377 AIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNE 436
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
Y I+P+++HY C+VD+L +G L+EA + I M + P+ +W +LL + HG + + E
Sbjct: 437 YKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEY 496
Query: 331 ALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAH 390
A +++IE+ P G Y++LSN+YA + WE V+ +R++M RG +K CS +E K H
Sbjct: 497 AAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLH 556
Query: 391 AFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVEND-EKANMICCHSERLA 449
F+ GD SHP EIYAK+ ++ ++K G+VP T V +E + EK + HSERLA
Sbjct: 557 EFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSERLA 616
Query: 450 IAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
IAFGLIN G + I KNL++C+DCH K +SKI REI VRD R+HHFK+G CSC
Sbjct: 617 IAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCM 676
Query: 510 DYW 512
DYW
Sbjct: 677 DYW 679
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 183/375 (48%), Gaps = 62/375 (16%)
Query: 6 HPVLATKLVHLYS--ACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
HP ++++L+ LYS + L A +FDRI +R+L WN +I+ Y N I L++
Sbjct: 44 HPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHE 103
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
L+ +PDNFT P +K C+ L ++EG++IH ++ + +DVFV +L++MY+KC
Sbjct: 104 LVH-EYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGE 162
Query: 124 VVNARQVFDKILERDPSEATLVTVISASA-----DIA--ALPQGRELHGFSWRHRFELNV 176
+ AR+VFD ++++D ++I A DIA + E FSW
Sbjct: 163 IDCARKVFDGMIDKDV--VLWNSLIDGYARCGEIDIALQLFEEMPERDAFSW-------- 212
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM--- 233
T LVD +KCG V+ AR LF+Q+ + +VSWNAMI GY G AL+LF +M
Sbjct: 213 ---TVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIW 269
Query: 234 -----------------------------KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
K +P H T V VLSA S + +GR
Sbjct: 270 DLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIH 329
Query: 265 ESMVRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
M ++ + +D + T ++++ G ++ A + ++ K G W A++ +HG
Sbjct: 330 SYMEKNGFELDGILG--TSLIEMYAKCGCIESALTVFRAIQ-KKKVGHWTAIIVGLGIHG 386
Query: 324 HVKLAELALEKLIEL 338
+A AL +E+
Sbjct: 387 ---MANHALALFLEM 398
>gi|115440653|ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group]
gi|20161481|dbj|BAB90405.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|56785052|dbj|BAD82691.1| PPR repeat containing protein-like [Oryza sativa Japonica Group]
gi|113534137|dbj|BAF06520.1| Os01g0814300 [Oryza sativa Japonica Group]
Length = 604
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/551 (38%), Positives = 310/551 (56%), Gaps = 41/551 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHN-AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV---A 57
F +LA+ S+C + A LFD+IP+ F +N LIRA +
Sbjct: 55 AFALSKLLASSSSSSSSSCGAAPSYARNLFDQIPEPTAFCYNSLIRALSSAAGAAPAADT 114
Query: 58 IELYYRLLEIGL-VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
+ +Y R+L G +P++FT FALKACS + A+ EGR++H R E +V L++
Sbjct: 115 VLVYRRMLRAGSPLPNSFTLAFALKACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLN 174
Query: 117 MYAKCSCVVNARQVFDKIL----------------------------------ERDPSEA 142
+YAKC V AR VFD ++ + +P E
Sbjct: 175 LYAKCEEVALARTVFDGMVGDKNLAAWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEV 234
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T+V+VISA A AL GR +H F R +++++ TAL+DMYAKCGL++ A+ +F+ +
Sbjct: 235 TMVSVISACAKAGALDLGRWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAM 294
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGR 261
E+ +W+AMI G A+HG AL LF +M + +V+P+++TF+GVLSAC+ GL +EGR
Sbjct: 295 AERDTKAWSAMIVGLAIHGLVEVALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGR 354
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
++ +M ++ I PS+++Y CMVDL S LDEA + M + P+ +W LL + K
Sbjct: 355 RYWSTM-QELGIKPSMENYGCMVDLFCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVASKN 413
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
+ + A +KL+ELEP + NYV+LSN+YA + W+ V+ +RK M + + CS
Sbjct: 414 SNRFDIVQSASKKLLELEPCNPENYVLLSNLYASNSQWDRVSYMRKKMKENNVNVVAGCS 473
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMI 441
IE+ H F+ D SHP EI L+ + R+ AG+ P T +V HDV +EK +
Sbjct: 474 SIEINGYLHKFVVSDDSHPEIKEIRLLLREIADRVVRAGHKPWTAAVLHDVGEEEKEVAL 533
Query: 442 CCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF 501
C HSERLAIA+GL+ T + + KNL+ C DCH K +SK +REI VRD R+H F
Sbjct: 534 CEHSERLAIAYGLLKTKAPHVIRVVKNLRFCPDCHEVAKIVSKSYDREIIVRDRVRFHRF 593
Query: 502 KDGICSCGDYW 512
+G CSC D+W
Sbjct: 594 VEGSCSCKDFW 604
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/506 (37%), Positives = 288/506 (56%), Gaps = 34/506 (6%)
Query: 41 WNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVI 100
WN LI G E A+ + ++ + D +T P L + +++ ++ +H +I
Sbjct: 9 WNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLII 68
Query: 101 RNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---------------------- 138
+ +E V ALIDMYAK + A VF K++++D
Sbjct: 69 KTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIK 128
Query: 139 -----------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYA 187
P + + +V+SA A++ + G+++H + E ++ V +LV MYA
Sbjct: 129 LFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYA 188
Query: 188 KCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVG 246
KCG + A F+ + + V+SW A+I GYA +G +L +++M +PD+ITF+G
Sbjct: 189 KCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIG 248
Query: 247 VLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK 306
+L ACS GL GR +FE+M + Y I P +HY CM+DLLG SG+L EA L+ QM V
Sbjct: 249 LLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVA 308
Query: 307 PDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLR 366
PD VW ALL +C++H ++L E+A + L ELEP ++ YV+LSN+Y+ A WE A++R
Sbjct: 309 PDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAARIR 368
Query: 367 KLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTE 426
+LM RGI K SWIE +K F+S D +HP +EIY+K+ + +KEAGYVP
Sbjct: 369 RLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEAGYVPDMS 428
Query: 427 SVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKIT 486
HD +++ K + HSE+LA+AFGL+ P G + I KNL++C DCH A+K+ SK+
Sbjct: 429 FALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTAMKYTSKVY 488
Query: 487 EREITVRDVNRYHHFKDGICSCGDYW 512
R I +RD N +HHF +G CSCGDYW
Sbjct: 489 ARHIILRDSNCFHHFTEGRCSCGDYW 514
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/550 (38%), Positives = 309/550 (56%), Gaps = 50/550 (9%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQR----NLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+V YS +A LF++I + N+ W+ +I YA G A++++ ++L G
Sbjct: 322 MVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCG 381
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIR-------NKWETDVFVGAALIDMYAKC 121
P+ T L C++ + G+ H I+ N D+ V ALIDMY+KC
Sbjct: 382 SEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKC 441
Query: 122 SCVVNARQVFDKILERD-------------------------------------PSEATL 144
AR +FD I +D P+ T+
Sbjct: 442 KSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTI 501
Query: 145 VTVISASADIAALPQGRELHGFSWRHRFELNVK-VKTALVDMYAKCGLVKVARNLFEQLR 203
+ A A + AL GR++H + R+RFE + V L+DMY+K G V AR +F+ +
Sbjct: 502 SCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMH 561
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRM 262
++ VSW +++TGY MHG +AL +F +M K + PD +TFV VL ACS G+ D+G
Sbjct: 562 QRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGIN 621
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
+F M +D+ + P +HY CMVDLL +GRLDEA +LI M +KP P VW ALL++C+++
Sbjct: 622 YFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVY 681
Query: 323 GHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSW 382
+V+L E A +L+ELE + G+Y +LSNIYA A W+ VA++R LM + GIKK CSW
Sbjct: 682 ANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSW 741
Query: 383 IEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMIC 442
++ + F +GD SHP +IY L+ L R+K GYVP HDV+++EK +++
Sbjct: 742 VQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLS 801
Query: 443 CHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFK 502
HSE+LA+A+G++ T G + ITKNL+ C DCH A +IS I E EI VRD +R+HHFK
Sbjct: 802 EHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFK 861
Query: 503 DGICSCGDYW 512
+G CSC YW
Sbjct: 862 NGSCSCRGYW 871
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 154/298 (51%), Gaps = 40/298 (13%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRI--PQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
T ++ +Y + A + R+ +F WN LIR G E ++LY R+ +G
Sbjct: 81 THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLG 140
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
PD++TFPF LKAC + + G +H V + +E +VFVG L+ MY +C NAR
Sbjct: 141 WRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENAR 200
Query: 129 QVFDKILERD-------------------------------------PSEATLVTVISAS 151
QVFD++ ER P +LV V+ A
Sbjct: 201 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPAC 260
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
A + A +G+++HG++ R +V V A+VDMYAKCG+++ A +FE+++ K VVSWN
Sbjct: 261 ASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWN 320
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
AM+TGY+ G AL LFEK+++E ++ + +T+ V++ ++ GL E F M+
Sbjct: 321 AMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQML 378
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 168/384 (43%), Gaps = 87/384 (22%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQR---NLFLWNVLIRAYAWNGPYEVAI 58
GF ++ + LV +Y C NA Q+FD + +R +L WN ++ AY G A+
Sbjct: 175 GFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAM 234
Query: 59 ELYYRLLE-IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDM 117
+++ R+ E +G+ PD + L AC+++ A G+++H +R+ DVFVG A++DM
Sbjct: 235 KMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDM 294
Query: 118 YAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
YAKC + A +VF+++ +D SW
Sbjct: 295 YAKCGMMEEANKVFERMKVKDV--------------------------VSW--------- 319
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKR----VVSWNAMITGYAMHGHSTKALDLFEKM 233
A+V Y++ G A LFE++RE++ VV+W+A+I GYA G +ALD+F +M
Sbjct: 320 --NAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQM 377
Query: 234 KD-EVQPDHITFVGVLSACSRGGLFDEGR----------------------MFFESMVRD 270
+P+ +T V +LS C+ G G+ M +++
Sbjct: 378 LLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDM 437
Query: 271 YH-----------------IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW- 312
Y D SV +T ++ G +EA +L QM ++PD V
Sbjct: 438 YSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQM-LQPDNFVMP 496
Query: 313 GALLNSCKLHGHVKLAELALEKLI 336
A SC L +L L + I
Sbjct: 497 NAFTISCALMACARLGALRFGRQI 520
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A L+ +YS + A +FD + QRN W L+ Y +G E A++++Y + ++
Sbjct: 536 VANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVX 595
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG----AALIDMYAKCSCV 124
LVPD TF L ACS +++G + NK + V G A ++D+ ++ +
Sbjct: 596 LVPDGVTFVVVLYACSHSGMVDQGINYFNGM--NK-DFGVVPGAEHYACMVDLLSRAGRL 652
Query: 125 VNARQVFDKILERDPSEATLVTVISA 150
A ++ + + P+ A V ++SA
Sbjct: 653 DEAMELI-RGMPMKPTPAVWVALLSA 677
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/523 (36%), Positives = 302/523 (57%), Gaps = 36/523 (6%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
+ +LFD + + +N ++RAY+ + + +Y + G+ D + FA+K+C
Sbjct: 80 SRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIK 139
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
L ++ G +IH + N + D + +++D+Y+ C A ++FD++ ++D
Sbjct: 140 LLSLLFGIQIHARIFINGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVL 199
Query: 139 ----------------------------PSEATLVTVISASADIAALPQGRELHGFSWRH 170
P + T + ++ A AD+ AL G +HG+ +H
Sbjct: 200 ISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQH 259
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
+ + +L+ MY++CG + A +F+++ EK VVSW+AMI+G +M+GH +A++ F
Sbjct: 260 GYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAF 319
Query: 231 -EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGH 289
E K+ V+P TF VLSACS GL DEG FF+ M +++ I P+V HY C+VDLLG
Sbjct: 320 WEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGR 379
Query: 290 SGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVIL 349
+G LD+A +LIM M V+PD +W LL +C++HGH L E +E LIEL+ +AG+YV+L
Sbjct: 380 AGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLL 439
Query: 350 SNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKL 409
NIY+ A NW+ V +LRKLM ++GI + C+ IE+ H F D SHP D+IY +L
Sbjct: 440 LNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQL 499
Query: 410 KWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNL 469
+ ++K AGY S H +E +K + HSE+LAIAFG++ TP G + I N+
Sbjct: 500 DEINKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNI 559
Query: 470 KICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ C DCH K+IS + R++ VRD +R+HHF++G CSC D+W
Sbjct: 560 RTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW 602
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ L L+ +YS C + A+++FD++ ++N+ W+ +I + NG AIE +
Sbjct: 260 GYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAF 319
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ + + G+ P + TF L ACS ++EG
Sbjct: 320 WEMQKNGVEPGDHTFTAVLSACSHCGLVDEG 350
>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/545 (37%), Positives = 302/545 (55%), Gaps = 35/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G G V+AT LV+ Y+ C + A + F +P+RN W +I A+ G + +A+E +
Sbjct: 262 GLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIG-HLLAVETF 320
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRI-------------------------H 96
+ +L G+VP T AL+ C L I
Sbjct: 321 HAMLLEGVVPTRSTLFAALEGCEDLRVARLVEAIAQEIGVVTDVAIVTDLVMAYARCDGQ 380
Query: 97 EDVIR-----NKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER--DPSEATLVTVIS 149
ED IR + E D + A+I +YA+C + +++ +ER P +T +
Sbjct: 381 EDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALD 440
Query: 150 ASADIAALPQGRELHG-FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A A +AAL +GR++H + R + +V + A+V MY +CG ++ AR+ F+ + + +
Sbjct: 441 ACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEI 500
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNAM++ A HG DLF M E + I F+ +LSAC+ GL G F +M
Sbjct: 501 SWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSACAHAGLVKAGCEHFSAM 560
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
D+ + P+ +HY CMVDLLG GRL +A ++ M V PD W AL+ +C+++G +
Sbjct: 561 TGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTER 620
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
A E+++EL YV L NIY+ A W+ A +RK+M D G++K S IE+++
Sbjct: 621 GRFAAERVLELRADHTAAYVALCNIYSAAGRWDDAAAVRKIMADLGLRKIPGVSSIEIRS 680
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K H F+ D SHP + IYA+L+ + G ++ AGY T V HDVE ++K ++ HSE+
Sbjct: 681 KVHEFVVRDRSHPQSEAIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEK 740
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFG+++TP G+ L + KNL++C DCH A KFISK+ REI VRDV R+HHFKDG CS
Sbjct: 741 LAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACS 800
Query: 508 CGDYW 512
CGDYW
Sbjct: 801 CGDYW 805
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 156/366 (42%), Gaps = 48/366 (13%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQR-NLFLWNVLIRAYAWNGPYEVAIEL 60
G G ++A+ LV +Y C L +A+ LF + + ++ LWN +I A + NG A+E+
Sbjct: 158 GLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEI 217
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEG--RRIHEDVIRNKWETDVFVGAALIDMY 118
+YR+L++G+ PD TF KACS+ ++ + H + +DV V AL++ Y
Sbjct: 218 FYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAY 277
Query: 119 AKCSCVVNARQVFDKILERD--------------------------------PSEATLVT 146
A+C + AR+ F ++ ER+ P+ +TL
Sbjct: 278 ARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIGHLLAVETFHAMLLEGVVPTRSTLFA 337
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+ D L R + + +V + T LV YA+C + A +F E
Sbjct: 338 ALEGCED---LRVARLVEAIAQEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFSAREEG- 393
Query: 207 VVSWN-----AMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEG 260
W+ AMI YA L+ ++ + PD I ++ L AC+ EG
Sbjct: 394 --EWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEG 451
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
R + D +D V +V + G G L +A D M + D W A+L++
Sbjct: 452 RQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPAR-DEISWNAMLSASA 510
Query: 321 LHGHVK 326
HG V+
Sbjct: 511 QHGRVE 516
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 123/281 (43%), Gaps = 40/281 (14%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
LA+ LV++Y C L +A +F +I +++ LW VLI AY G AI L++R+L+ G
Sbjct: 64 LASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEG 123
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D F L ACS+ + GR IH + V +AL+ MY +C + +A
Sbjct: 124 IALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDAN 183
Query: 129 QVFDKILER------------------DPSEA-----------------TLVTVISASAD 153
+F LER P EA T V+V A +
Sbjct: 184 ALFGH-LERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSS 242
Query: 154 IAAL--PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+L Q + H +V V TALV+ YA+CG + AR F ++ E+ VSW
Sbjct: 243 SPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWT 302
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSAC 251
+MI + GH A++ F M E V P T L C
Sbjct: 303 SMIAAFTQIGH-LLAVETFHAMLLEGVVPTRSTLFAALEGC 342
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 117/267 (43%), Gaps = 37/267 (13%)
Query: 107 DVFVGAALIDMYAKCSCVVNARQVFDKI---------------LERDPSEATL------- 144
D ++ ++L+ MY +C + +A VF KI + R S A +
Sbjct: 61 DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120
Query: 145 -----------VTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVK 193
V+V+SA + L GR +H + L V +ALV MY +CG ++
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLR 180
Query: 194 VARNLFEQL-REKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSAC 251
A LF L R VV WNAMIT + +G +AL++F +M + + PD +TFV V AC
Sbjct: 181 DANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKAC 240
Query: 252 SRGGLFDEGRM-FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPG 310
S ++ F + + + + V T +V+ G +D A +M + +
Sbjct: 241 SSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPER-NAV 299
Query: 311 VWGALLNSCKLHGHVKLAELALEKLIE 337
W +++ + GH+ E L+E
Sbjct: 300 SWTSMIAAFTQIGHLLAVETFHAMLLE 326
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 3/172 (1%)
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE- 236
+ ++LV MY +CG ++ A ++F ++ K +V W +I+ Y GHS A+ LF ++ E
Sbjct: 64 LASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEG 123
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+ D I FV VLSACS GR+ V + + + +V + G G L +A
Sbjct: 124 IALDAIVFVSVLSACSSEEFLAAGRLIHRCAV-EAGLGLQEIVASALVSMYGRCGSLRDA 182
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE-PHDAGNYV 347
L + D +W A++ + +G + A ++++L P D +V
Sbjct: 183 NALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFV 234
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/492 (40%), Positives = 301/492 (61%), Gaps = 12/492 (2%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+A +FDR+ R++ WN +I YA G + A L+ + E LV N +K +
Sbjct: 279 HARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGN 338
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI--LERDPSEA 142
+E+ + ++ DV +++ YA+C A +FD++ + P+EA
Sbjct: 339 ----VEDAFGLFSEMPCR----DVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEA 390
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T+V+++SA A + AL +G LH + +R E+N V TALVDMYAKCG + +A +F +
Sbjct: 391 TVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAM 450
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR 261
K V++WN +I G A+HG+ +A LF++MK+ V+P+ ITFV +LSACS G+ DEG+
Sbjct: 451 ESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQ 510
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
+ M Y I+P V+HY C++DLL +G L+EA +LI M ++P+P GALL C++
Sbjct: 511 KLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRI 570
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
HG+ +L E+ ++LI L+P +G Y++LSNIYA A W+ K+R LM GI K S
Sbjct: 571 HGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVS 630
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEA-GYVPGTESVFHDVENDEKANM 440
IE+K H F++GD SHP ++IY KL + R+K A GY T +V D+E ++K +
Sbjct: 631 VIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHA 690
Query: 441 ICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHH 500
+ HSE+LAIA+GL++ + I KNL++C DCH IK ISK+ REI VRD NR+HH
Sbjct: 691 LAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHH 750
Query: 501 FKDGICSCGDYW 512
F+DG CSC D+W
Sbjct: 751 FEDGECSCLDFW 762
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 177/359 (49%), Gaps = 42/359 (11%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +F + L+N LIRA + + A+ LY+ +L+ GL PD+ T+PF +KAC+
Sbjct: 148 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 207
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK-------------CSC--------- 123
S G +H V+++ +E D ++ ++LI +YA CS
Sbjct: 208 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 267
Query: 124 ---------VVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL 174
+ +AR VFD+++ RD + T+I+ A + + + + L + E
Sbjct: 268 IDGYVKHVEMGHARMVFDRMVCRD--VISWNTMINGYAIVGKIDEAKRL----FDEMPER 321
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
N+ +++ + KCG V+ A LF ++ + VVSWN+M+ YA G +AL LF++M+
Sbjct: 322 NLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMR 381
Query: 235 D-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
V+P T V +LSAC+ G D+G + + + D I+ + T +VD+ G++
Sbjct: 382 AVGVKPTEATVVSLLSACAHLGALDKG-LHLHTYINDNRIEVNSIVGTALVDMYAKCGKI 440
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHDAGNYVILS 350
A + M K D W ++ +HG+VK A+ +++ E +EP+D ILS
Sbjct: 441 SLATQVFNAMESK-DVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILS 498
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 118/257 (45%), Gaps = 9/257 (3%)
Query: 17 YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTF 76
+ C + +A LF +P R++ WN ++ YA G A+ L+ ++ +G+ P T
Sbjct: 333 FVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATV 392
Query: 77 PFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILE 136
L AC+ L A+++G +H + N+ E + VG AL+DMYAKC + A QVF+ +
Sbjct: 393 VSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMES 452
Query: 137 RDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
+D T+I+ A + + ++L E N A++ + G+V +
Sbjct: 453 KD--VLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQ 510
Query: 197 NLFEQLR-----EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSAC 251
L + + E +V + +I A G +A++L M E P + +L C
Sbjct: 511 KLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALG--ALLGGC 568
Query: 252 SRGGLFDEGRMFFESMV 268
G F+ G M + ++
Sbjct: 569 RIHGNFELGEMVGKRLI 585
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 88/181 (48%), Gaps = 21/181 (11%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++ T LV +Y+ C + A Q+F+ + +++ WN +I A +G + A +L+ + E
Sbjct: 425 IVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEA 484
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYAKCSCVV 125
G+ P++ TF L ACS ++EG+++ D + + + E V +ID+ A+ +
Sbjct: 485 GVEPNDITFVAILSACSHAGMVDEGQKL-LDCMSSSYGIEPKVEHYGCVIDLLARAGFLE 543
Query: 126 NARQVFDKI-LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVD 184
A ++ + +E +PS + AL G +HG FEL V L++
Sbjct: 544 EAMELIGTMPMEPNPSA------------LGALLGGCRIHG-----NFELGEMVGKRLIN 586
Query: 185 M 185
+
Sbjct: 587 L 587
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/542 (36%), Positives = 294/542 (54%), Gaps = 35/542 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L +Y A +LF R+ +++ W +I Y +N E AI+ Y
Sbjct: 327 GFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTY 386
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + + PD T L AC+ L ++ G +H+ I+ + + V V LI+MY+KC
Sbjct: 387 RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKC 446
Query: 122 SCVVNARQVFDKILERD--------------------------------PSEATLVTVIS 149
C+ A +F I ++ P+ TL ++
Sbjct: 447 KCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMTLQPNAITLTAALA 506
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A A I AL G+E+H R L+ + AL+DMY +CG + +A N F ++K V S
Sbjct: 507 ACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNS-QKKDVSS 565
Query: 210 WNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WN ++TGY+ G + ++LF++M K V+PD ITF+ +L C + + +G M+F M
Sbjct: 566 WNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKM- 624
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+Y + P+++HY C+VDLLG +G L EA I +M V PDP VWGALLN+C++H ++ L
Sbjct: 625 EEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHNIDLG 684
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
EL+ +++ EL+ G Y++L N+YA W VAK+R++M + G+ CSW+EVK K
Sbjct: 685 ELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGK 744
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
HAFLS D HP EI L +M E G +ES D + + C HSER
Sbjct: 745 VHAFLSDDKYHPQTKEINTVLDGFYEKMSEVGLTTSSESSSMDETEISRDEIFCGHSERK 804
Query: 449 AIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
AIAFGLIN+ G + +TKNL +C+ CH +KFISK REI+VRD +HHFKDG CSC
Sbjct: 805 AIAFGLINSVPGMPIWVTKNLNMCESCHDTVKFISKTVRREISVRDSEHFHHFKDGECSC 864
Query: 509 GD 510
GD
Sbjct: 865 GD 866
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 139/273 (50%), Gaps = 35/273 (12%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV-PDNFTFPFALK 81
L +A +F ++ +RNLF WNVL+ YA G ++ AI LY+R+L +G V PD +TFP L+
Sbjct: 145 LVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLR 204
Query: 82 ACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER---- 137
C + + GR +H V+R +E D+ V ALI MY KC V +AR +FD++ R
Sbjct: 205 TCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIIS 264
Query: 138 -----------------------------DPSEATLVTVISASADIAALPQGRELHGFSW 168
DP TL +VISA + GR++H +
Sbjct: 265 WNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVI 324
Query: 169 RHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALD 228
F +++ V +L MY G + A LF ++ K +VSW MI+GY + KA+D
Sbjct: 325 TTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAID 384
Query: 229 LFEKM-KDEVQPDHITFVGVLSACSRGGLFDEG 260
+ M +D V+PD IT VLSAC+ G D G
Sbjct: 385 TYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 161/370 (43%), Gaps = 38/370 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G+ + L+ +Y C + +A LFDR+P+R++ WN +I Y NG ++L+
Sbjct: 226 GYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLF 285
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + + + PD T + AC L GR IH VI + D+ V +L MY
Sbjct: 286 FAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYA 345
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
A ++F ++ +D P E T+ V+
Sbjct: 346 GSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVL 405
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A + L G ELH + + R V V L++MY+KC + A ++F + K V+
Sbjct: 406 SACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVI 465
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
SW ++I G ++ +AL F +MK +QP+ IT L+AC+R G G+ ++
Sbjct: 466 SWTSIIAGLRLNNRCFEALIFFRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVL 525
Query: 269 RD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
R +D + + ++D+ GR++ A + K D W LL G +
Sbjct: 526 RTGVGLDDFLPN--ALLDMYVRCGRMNIAWNQFNSQ--KKDVSSWNILLTGYSERGQGSV 581
Query: 328 AELALEKLIE 337
+++++
Sbjct: 582 VVELFDRMVK 591
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 138/303 (45%), Gaps = 39/303 (12%)
Query: 51 NGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFV 110
NG E A++L + E+ + D F ++ C A EEG +++ + + V +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVEL 131
Query: 111 GAALIDMYAKCSCVVNARQVFDKILERD-------------------------------- 138
G A + M+ + +V+A VF K+ ER+
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGG 191
Query: 139 --PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
P T V+ I L +GRE+H R+ +EL++ V AL+ MY KCG VK AR
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGG 255
LF+++ + ++SWNAMI+GY +G + L LF M+ V PD +T V+SAC G
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 256 LFDEGRMFFESMVRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGA 314
GR ++ + +D SV + + + ++G EA L +M K D W
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCN--SLTQMYLYAGSWREAEKLFSRMDCK-DIVSWTT 368
Query: 315 LLN 317
+++
Sbjct: 369 MIS 371
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 103/252 (40%), Gaps = 40/252 (15%)
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
A +G +++ + L+V++ A + M+ + G + A +F ++ E+ + SWN ++
Sbjct: 109 AHEEGSKVYSVALSSMNSLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVG 168
Query: 216 GYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFD--EGRMFFESMVR-D 270
GYA G+ +A+ L+ +M V+PD TF VL C GG+ D GR +VR
Sbjct: 169 GYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTC--GGIPDLARGREVHVHVVRYG 226
Query: 271 YHIDPSVQH-----------------------------YTCMVDLLGHSGRLDEACDLIM 301
Y +D V + + M+ +G E L
Sbjct: 227 YELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFF 286
Query: 302 QMR---VKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE-PHDAGNYVILSNIYARAA 357
MR V PD +++++C+L G +L +I D L+ +Y A
Sbjct: 287 AMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAG 346
Query: 358 NWEGVAKLRKLM 369
+W KL M
Sbjct: 347 SWREAEKLFSRM 358
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/566 (36%), Positives = 313/566 (55%), Gaps = 78/566 (13%)
Query: 19 ACDCLHNAHQLFDRIPQRNLFLWNVLIRAYA----WNGPYEVAIELYYRLLEIGLVPDNF 74
A C H + L P F+WN LIRA N + A+ LY R+ ++PD
Sbjct: 7 AISCTHPSLHLSH--PNIESFVWNNLIRASTRSRVQNPAFPPALSLYLRMRLHAVLPDLH 64
Query: 75 TFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC----------- 123
TFPF L++ ++ GR++H ++ D FV +LI+MY+ C
Sbjct: 65 TFPFLLQS---INTPHRGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEI 121
Query: 124 --------------------VVNARQVFDKILERD------------------------- 138
+ AR++FD++ E++
Sbjct: 122 TQPDLPSWNAIIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFR 181
Query: 139 -----------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYA 187
P+E T+ +V+SA A + AL G+ +H + + +++V + T+L+DMYA
Sbjct: 182 SLQTLEGSQLRPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYA 241
Query: 188 KCGLVKVARNLFEQL-REKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFV 245
KCG ++ A+ +F+ L EK V++W+AMIT ++MHG S + L+LF +M D V+P+ +TFV
Sbjct: 242 KCGSIERAKCIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFV 301
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
VL AC GGL EG +F+ M+ +Y + P +QHY CMVDL +GR+++A +++ M +
Sbjct: 302 AVLCACVHGGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPM 361
Query: 306 KPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKL 365
+PD +WGALLN ++HG V+ E+A+ KL+EL+P ++ YV+LSN+YA+ W V L
Sbjct: 362 EPDVMIWGALLNGARIHGDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHL 421
Query: 366 RKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGT 425
R LM RGIKK CS +EV F +GD SHP +Y L + R+++ GY T
Sbjct: 422 RDLMEVRGIKKLPGCSLVEVDGVIREFFAGDNSHPELLNLYVMLDEIMKRLEKHGYERNT 481
Query: 426 ESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKI 485
V D++ + K + HSE+LAIA+ + T GT + I KNL+IC DCH+AIK ISK
Sbjct: 482 GEVLLDLDEEGKEFALSLHSEKLAIAYCFLRTSPGTTIRIVKNLRICSDCHVAIKIISKE 541
Query: 486 TEREITVRDVNRYHHFKDGICSCGDY 511
REI VRD NR+HHFK+G+CSC DY
Sbjct: 542 FNREIIVRDCNRFHHFKNGLCSCKDY 567
>gi|356537359|ref|XP_003537195.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g13770, mitochondrial-like
[Glycine max]
Length = 600
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/541 (36%), Positives = 303/541 (56%), Gaps = 41/541 (7%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L T+L+ Y+ CD L +A + + +P+RN+ W +I AY+ G A+ + ++L G
Sbjct: 63 LWTRLIVFYTKCDSLGDARHVLNEMPERNVVSWTAMISAYSQRGYASQALSILVQILRSG 122
Query: 69 LVPDNFTF---PFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
+ FTF P+ + E IH +I+ ++ V+VG++L+DMYAK +
Sbjct: 123 TESNEFTFATMPYFMYRFLGFCLREA---IHSLIIKLNFKAHVYVGSSLLDMYAKDGKIH 179
Query: 126 NARQVFDKILERD--------------------------------PSEATLVTVISASAD 153
AR +F+ + ERD + T +V++A +
Sbjct: 180 EARGIFECLPERDVVSCTAIISGYAQLDLDEELELFLRLQREGMXSNYVTYTSVLTALSG 239
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+AAL G+++H V ++ +L+DMY+KCG + AR +F+ +RE+ V+SWNAM
Sbjct: 240 LAALDHGKQVHNHLLCSEVPSFVILQNSLIDMYSKCGNLTYARRIFDTMRERTVISWNAM 299
Query: 214 ITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFDEGR-MFFESMVRD 270
+ GY+ HG + L+LF M+DE V+PD +T + VLS CS GG D+G +F++
Sbjct: 300 LVGYSKHGERREVLELFNLMRDENKVKPDSVTVLAVLSGCSHGGQEDKGMDIFYDMTSGK 359
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
+ P + Y C+VDLLG +GR++EA + I ++ +P + G LL +C +H ++ + E
Sbjct: 360 ISVQPDTKRYGCVVDLLGRAGRVEEAFEFIKKIPFEPSAAICGCLLGACSVHSNLGIGEF 419
Query: 331 ALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAH 390
+L+E EP +AGNYVILSN+YA A WE V LR LM+ + + K S IEV
Sbjct: 420 VGHRLLEFEPENAGNYVILSNLYASAGRWEDVTSLRNLMLKKAVTKEPGRSLIEVDQVLQ 479
Query: 391 AFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAI 450
F D SHP +E+ AK + L R KEAGY P V HDV+ ++K ++ HSE+LA+
Sbjct: 480 TFHPSDCSHPRREEVSAKXQELLVRFKEAGYFPDLSCVLHDVDEEQKEKILLSHSEKLAL 539
Query: 451 AFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGD 510
+FGLI TP+ + + KNL+IC DCH K+ISKI RE+++RD N +H CSCGD
Sbjct: 540 SFGLIATPESVLICVIKNLRICVDCHNFAKYISKIYSREVSLRDKNWFHGIVGEKCSCGD 599
Query: 511 Y 511
Y
Sbjct: 600 Y 600
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 129/278 (46%), Gaps = 37/278 (13%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
L C + A +EG+R+H I+ + V++ LI Y KC + +AR V +++ ER+
Sbjct: 33 LNECVSKRAFKEGQRVHAHTIKTHYLPCVYLWTRLIVFYTKCDSLGDARHVLNEMPERNV 92
Query: 139 PSEATLVTVIS----ASADIAALPQ----GRELHGFSW---------------------- 168
S +++ S AS ++ L Q G E + F++
Sbjct: 93 VSWTAMISAYSQRGYASQALSILVQILRSGTESNEFTFATMPYFMYRFLGFCLREAIHSL 152
Query: 169 --RHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ F+ +V V ++L+DMYAK G + AR +FE L E+ VVS A+I+GYA +
Sbjct: 153 IIKLNFKAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLDLD-EE 211
Query: 227 LDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
L+LF +++ E + +++T+ VL+A S D G+ ++ + V ++D
Sbjct: 212 LELFLRLQREGMXSNYVTYTSVLTALSGLAALDHGKQVHNHLLCS-EVPSFVILQNSLID 270
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
+ G L A + MR + W A+L HG
Sbjct: 271 MYSKCGNLTYARRIFDTMRERTVIS-WNAMLVGYSKHG 307
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
TV++ A +G+ +H + + + V + T L+ Y KC + AR++ ++ E+
Sbjct: 31 TVLNECVSKRAFKEGQRVHAHTIKTHYLPCVYLWTRLIVFYTKCDSLGDARHVLNEMPER 90
Query: 206 RVVSWNAMITGYAMHGHSTKALD-LFEKMKDEVQPDHITF 244
VVSW AMI+ Y+ G++++AL L + ++ + + TF
Sbjct: 91 NVVSWTAMISAYSQRGYASQALSILVQILRSGTESNEFTF 130
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 8/198 (4%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+L L+ +YS C L A ++FD + +R + WN ++ Y+ +G +EL+ + +
Sbjct: 263 ILQNSLIDMYSKCGNLTYARRIFDTMRERTVISWNAMLVGYSKHGERREVLELFNLMRDE 322
Query: 68 GLV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMYAKCSCV 124
V PD+ T L CS ++G I D+ K + D ++D+ + V
Sbjct: 323 NKVKPDSVTVLAVLSGCSHGGQEDKGMDIFYDMTSGKISVQPDTKRYGCVVDLLGRAGRV 382
Query: 125 VNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVD 184
A + KI +PS A ++ A + + L G E G N L +
Sbjct: 383 EEAFEFIKKI-PFEPSAAICGCLLGACSVHSNLGIG-EFVGHRLLEFEPENAGNYVILSN 440
Query: 185 MYAKCGL---VKVARNLF 199
+YA G V RNL
Sbjct: 441 LYASAGRWEDVTSLRNLM 458
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/584 (36%), Positives = 324/584 (55%), Gaps = 77/584 (13%)
Query: 6 HPVLATKLVHLY--SACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV------- 56
HP+ A +L+ S + A + F +I N F WN +IRA A + ++
Sbjct: 46 HPLAAAELLKFLTLSTQREIKYARKFFSQIHHPNCFSWNTIIRALADSDDDDLFHVNSLE 105
Query: 57 AIELYYRLLEIGLV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAAL- 114
A+ + +L GLV P+ FTFP LKAC+ L+ IEEG+++H V++ +D FV + L
Sbjct: 106 ALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLV 165
Query: 115 -------------------------------IDMYAKCSCVVNARQVFDKILERD----- 138
ID Y + + +R++FD + +
Sbjct: 166 RVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWN 225
Query: 139 ----------------------------PSEATLVTVISASADIAALPQGRELHGFSWRH 170
P+ TLV+V+ A + + A+ G+ +H F+ ++
Sbjct: 226 VMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKN 285
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR-VVSWNAMITGYAMHGHSTKALDL 229
E++ + +AL+DMY+KCG + A +FE +R K+ ++W+A+I G AMHG + ALD
Sbjct: 286 EIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSAIIGGLAMHGRARDALDH 345
Query: 230 FEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
F +M+ V P + ++GVLSACS GL +EGR + MV + P ++HY CMVDLLG
Sbjct: 346 FWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLG 405
Query: 289 HSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVI 348
+G L+EA LI+ M VKPD + ALL +CK+HG++++ E + L+ PHD+G+YV
Sbjct: 406 RAGCLEEAEQLILNMPVKPDDVILKALLGACKMHGNIEMGERIAKILMGWYPHDSGSYVA 465
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAK 408
LSN++A NWEGV K+R M + I+K CSWIE+ H FL D SHP + I++
Sbjct: 466 LSNMFASEGNWEGVVKVRLKMKELDIRKDPGCSWIELDGVIHEFLVEDDSHPRAEGIHSM 525
Query: 409 LKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKN 468
L+ + R++ GY P T V +++ EK + + HSE++AIAFGLI+T T L I KN
Sbjct: 526 LEEMSDRLRSVGYRPNTTQVLLNMDEKEKQSALHYHSEKIAIAFGLISTRPQTPLQIVKN 585
Query: 469 LKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L++C+DCH +IK +SKI R+I VRD R+HHF++G CSC DYW
Sbjct: 586 LRVCEDCHSSIKLVSKIYNRKIIVRDRKRFHHFENGSCSCMDYW 629
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/577 (37%), Positives = 306/577 (53%), Gaps = 79/577 (13%)
Query: 12 KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR-LLEIGLV 70
+L Y+A L A L R P + I A++ G + A+ L LL GL+
Sbjct: 67 RLQRAYAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRGLHHAALALLSEMLLSHGLL 126
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY------------ 118
P T +L AC L+ GR +H ++ + +V AL+ MY
Sbjct: 127 PTAHTLSASLPACGGLAV---GRALHGYAVKLALSGEPYVATALLGMYARAGDAAAARVL 183
Query: 119 --------------------AKCSCVVNARQVFDKILERD-------------------- 138
AK + +AR +FD + +D
Sbjct: 184 FDGMQPDPHVVSVTAMLTCYAKMGLLDDARSLFDGLPSKDLICWNAMMDGYTQHGRPSEA 243
Query: 139 -------------PSEATLVTVISASADIAALPQGRELHGF---SWRHRFELNVKVKTAL 182
P E ++V +SA A + GR LH F S R LN +V TAL
Sbjct: 244 LRLFRRMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVTNSSSRRVRLNARVGTAL 303
Query: 183 VDMYAKCGLVKVARNLFEQLR--EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQP 239
+DMY KCG ++ A +F L ++ +V+WNAM+ GYAMHGHS +AL F +++ + + P
Sbjct: 304 IDMYYKCGSLEDAVAVFGDLGAGDRDIVAWNAMVNGYAMHGHSREALAAFGQLRAQGLWP 363
Query: 240 DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
ITF+GVL+ACS GL DEGR F SM +Y I+P V+HY CMVDLLG +GR++EA +L
Sbjct: 364 TDITFIGVLNACSHSGLVDEGRELFRSMAEEYGIEPKVEHYGCMVDLLGRAGRVEEAFEL 423
Query: 300 IMQM-RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN 358
+ M R KPD +W +LL +C+LH +++L + + L+ ++G YV+LSN+YA A N
Sbjct: 424 VQSMTRTKPDAVMWASLLAACRLHKNMELGQRIADHLVANGLANSGTYVLLSNMYAAAGN 483
Query: 359 WEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKE 418
W V ++R +M GI+K CS +EV + F++GD SHP EIYAKL+ + G +
Sbjct: 484 WREVGRVRAMMRASGIQKEPGCSAVEVGRRVVEFVAGDRSHPRAAEIYAKLEEVNGMARA 543
Query: 419 AGYVPGTE---SVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDC 475
G+VP TE D + K + HSE+LA+AFGLI+TP GT + I KNL+ C DC
Sbjct: 544 RGHVPRTELVLHDLDDDDTAAKEQALAVHSEKLALAFGLISTPPGTAIKIVKNLRACADC 603
Query: 476 HIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
H +K +S++T R+I RD NR+HHF DG C+CGDYW
Sbjct: 604 HAVLKLVSEVTGRKIVFRDRNRFHHFVDGSCTCGDYW 640
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 3/145 (2%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
+ T L+ +Y C L +A +F + R++ WN ++ YA +G A+ + +L
Sbjct: 299 VGTALIDMYYKCGSLEDAVAVFGDLGAGDRDIVAWNAMVNGYAMHGHSREALAAFGQLRA 358
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN-KWETDVFVGAALIDMYAKCSCVV 125
GL P + TF L ACS ++EGR + + E V ++D+ + V
Sbjct: 359 QGLWPTDITFIGVLNACSHSGLVDEGRELFRSMAEEYGIEPKVEHYGCMVDLLGRAGRVE 418
Query: 126 NARQVFDKILERDPSEATLVTVISA 150
A ++ + P ++++A
Sbjct: 419 EAFELVQSMTRTKPDAVMWASLLAA 443
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/544 (34%), Positives = 308/544 (56%), Gaps = 34/544 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F + + + L+ +Y+ L A + R +++ W +I Y + A+ +
Sbjct: 521 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFR 580
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
++L+ G+ D A+ AC+ L A++EG++IH + + +D+ AL+ +Y++C
Sbjct: 581 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCG 640
Query: 123 CVVNARQVFDKI------------------------------LER---DPSEATLVTVIS 149
+ + F++ + R D + T + +
Sbjct: 641 KIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVK 700
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A+++ A + QG+++H + ++ +V AL+ MYAKCG + A F ++ K VS
Sbjct: 701 AASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS 760
Query: 210 WNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WNA+I Y+ HG ++ALD F++M V+P+H+T VGVLSACS GL D+G +FESM
Sbjct: 761 WNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMN 820
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+Y + P +HY C+VD+L +G L A + I +M +KPD VW LL++C +H ++++
Sbjct: 821 SEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIG 880
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
E A L+ELEP D+ YV+LSN+YA + W+ R+ M ++G+KK SWIEVKN
Sbjct: 881 EFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNS 940
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
H+F GD +HP DEI+ + L R E GYV S+ +++++++K +I HSE+L
Sbjct: 941 IHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKL 1000
Query: 449 AIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
AI+FGL++ P + + KNL++C+DCH IKF+SK++ REI VRD R+HHF+ G CSC
Sbjct: 1001 AISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSC 1060
Query: 509 GDYW 512
DYW
Sbjct: 1061 KDYW 1064
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 170/372 (45%), Gaps = 40/372 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + + L++LY+ C + A F N+ LWNV++ AY + +
Sbjct: 418 LGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRI 477
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ +VP+ +T+P LK C L +E G +IH +I+ ++ + +V + LIDMYAK
Sbjct: 478 FRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAK 537
Query: 121 CS-----------------------------------CVVNARQVFDKILERDPSEATLV 145
+ RQ+ D+ + D E L
Sbjct: 538 LGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD--EVGLT 595
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+SA A + AL +G+++H + F ++ + ALV +Y++CG ++ + FEQ
Sbjct: 596 NAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAG 655
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF 264
++WNA+++G+ G++ +AL +F +M E + ++ TF + A S +G+
Sbjct: 656 DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ-V 714
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+++ D + ++ + G + +A +++ K + W A++N+ HG
Sbjct: 715 HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS-WNAIINAYSKHGF 773
Query: 325 VKLAELALEKLI 336
A + +++I
Sbjct: 774 GSEALDSFDQMI 785
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 160/345 (46%), Gaps = 40/345 (11%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+ L+ LYS + A ++FD + ++ W +I + N AI L+ + +
Sbjct: 223 VVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVL 282
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G++P + F L AC + ++E G ++H V++ + +D +V AL+ +Y +++A
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
+F + +RD P TL +++ A +
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 402
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L +G++LH ++ + F N K++ AL+++YAKC ++ A + F + + VV WN M+
Sbjct: 403 GTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVML 462
Query: 215 TGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
Y + + +F +M+ +E+ P+ T+ +L C R G + G +++
Sbjct: 463 VAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK---T 519
Query: 274 DPSVQHYTC--MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
+ + Y C ++D+ G+LD A D++++ K D W ++
Sbjct: 520 NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMI 563
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 171/405 (42%), Gaps = 68/405 (16%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + L+ KL Y L+ A ++FD +P+R +F WN +I+ A L
Sbjct: 114 LGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGL 173
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALS-AIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
+ R++ + P+ TF L+AC S A + +IH ++ V LID+Y+
Sbjct: 174 FVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYS 233
Query: 120 KCSCVVNARQVFDKILERD---------------------------------PSEATLVT 146
+ V AR+VFD + +D P+ +
Sbjct: 234 RNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSS 293
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V+SA I +L G +LHG + F + V ALV +Y G + A ++F + ++
Sbjct: 294 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 353
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V++N +I G + G+ KA++LF++M D ++PD T ++ ACS G G+
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 266 SMVR---------------------------DYHIDPSVQHYTCMVDLLGHSGRLDE--- 295
+ DY ++ V++ +L G LD+
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 473
Query: 296 ACDLIMQMRVK---PDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+ + QM+++ P+ + ++L +C G ++L E ++I+
Sbjct: 474 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 518
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 137/329 (41%), Gaps = 43/329 (13%)
Query: 68 GLVPDNFTFPFALKAC-SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
G+ P++ T + L+ C +++EGR++H +++ +++ + L D Y +
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 127 ARQVFDKILER---------------------------------DPSEATLVTVISA-SA 152
A +VFD++ ER P+E T V+ A
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
A ++H + V L+D+Y++ G V +AR +F+ LR K SW A
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 213 MITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
MI+G + + +A+ LF M + P F VLSAC + + G +++
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK-- 316
Query: 272 HIDPSVQHYTC--MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+ S Y C +V L H G L A + M + D + L+N G+ + A
Sbjct: 317 -LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLINGLSQCGYGEKA- 373
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAAN 358
+ L K + L+ + + + S + A +A+
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSAD 402
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/544 (34%), Positives = 308/544 (56%), Gaps = 34/544 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F + + + L+ +Y+ L A + R +++ W +I Y + A+ +
Sbjct: 481 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFR 540
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
++L+ G+ D A+ AC+ L A++EG++IH + + +D+ AL+ +Y++C
Sbjct: 541 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCG 600
Query: 123 CVVNARQVFDKI------------------------------LER---DPSEATLVTVIS 149
+ + F++ + R D + T + +
Sbjct: 601 KIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVK 660
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A+++ A + QG+++H + ++ +V AL+ MYAKCG + A F ++ K VS
Sbjct: 661 AASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS 720
Query: 210 WNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WNA+I Y+ HG ++ALD F++M V+P+H+T VGVLSACS GL D+G +FESM
Sbjct: 721 WNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMN 780
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+Y + P +HY C+VD+L +G L A + I +M +KPD VW LL++C +H ++++
Sbjct: 781 SEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIG 840
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
E A L+ELEP D+ YV+LSN+YA + W+ R+ M ++G+KK SWIEVKN
Sbjct: 841 EFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNS 900
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
H+F GD +HP DEI+ + L R E GYV S+ +++++++K +I HSE+L
Sbjct: 901 IHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKL 960
Query: 449 AIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
AI+FGL++ P + + KNL++C+DCH IKF+SK++ REI VRD R+HHF+ G CSC
Sbjct: 961 AISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSC 1020
Query: 509 GDYW 512
DYW
Sbjct: 1021 KDYW 1024
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 170/372 (45%), Gaps = 40/372 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + + L++LY+ C + A F N+ LWNV++ AY + +
Sbjct: 378 LGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRI 437
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ +VP+ +T+P LK C L +E G +IH +I+ ++ + +V + LIDMYAK
Sbjct: 438 FRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAK 497
Query: 121 CS-----------------------------------CVVNARQVFDKILERDPSEATLV 145
+ RQ+ D+ + D E L
Sbjct: 498 LGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD--EVGLT 555
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
+SA A + AL +G+++H + F ++ + ALV +Y++CG ++ + FEQ
Sbjct: 556 NAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAG 615
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFF 264
++WNA+++G+ G++ +AL +F +M E + ++ TF + A S +G+
Sbjct: 616 DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ-V 674
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+++ D + ++ + G + +A +++ K + W A++N+ HG
Sbjct: 675 HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS-WNAIINAYSKHGF 733
Query: 325 VKLAELALEKLI 336
A + +++I
Sbjct: 734 GSEALDSFDQMI 745
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 160/345 (46%), Gaps = 40/345 (11%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+ L+ LYS + A ++FD + ++ W +I + N AI L+ + +
Sbjct: 183 VVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVL 242
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G++P + F L AC + ++E G ++H V++ + +D +V AL+ +Y +++A
Sbjct: 243 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 302
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
+F + +RD P TL +++ A +
Sbjct: 303 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 362
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L +G++LH ++ + F N K++ AL+++YAKC ++ A + F + + VV WN M+
Sbjct: 363 GTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVML 422
Query: 215 TGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
Y + + +F +M+ +E+ P+ T+ +L C R G + G +++
Sbjct: 423 VAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK---T 479
Query: 274 DPSVQHYTC--MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
+ + Y C ++D+ G+LD A D++++ K D W ++
Sbjct: 480 NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMI 523
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 171/405 (42%), Gaps = 68/405 (16%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + L+ KL Y L+ A ++FD +P+R +F WN +I+ A L
Sbjct: 74 LGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGL 133
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALS-AIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
+ R++ + P+ TF L+AC S A + +IH ++ V LID+Y+
Sbjct: 134 FVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYS 193
Query: 120 KCSCVVNARQVFDKILERD---------------------------------PSEATLVT 146
+ V AR+VFD + +D P+ +
Sbjct: 194 RNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSS 253
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V+SA I +L G +LHG + F + V ALV +Y G + A ++F + ++
Sbjct: 254 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 313
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V++N +I G + G+ KA++LF++M D ++PD T ++ ACS G G+
Sbjct: 314 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 373
Query: 266 SMVR---------------------------DYHIDPSVQHYTCMVDLLGHSGRLDE--- 295
+ DY ++ V++ +L G LD+
Sbjct: 374 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 433
Query: 296 ACDLIMQMRVK---PDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+ + QM+++ P+ + ++L +C G ++L E ++I+
Sbjct: 434 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 478
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 120/295 (40%), Gaps = 42/295 (14%)
Query: 68 GLVPDNFTFPFALKAC-SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
G+ P++ T + L+ C +++EGR++H +++ +++ + L D Y +
Sbjct: 39 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 98
Query: 127 ARQVFDKILER---------------------------------DPSEATLVTVISA-SA 152
A +VFD++ ER P+E T V+ A
Sbjct: 99 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 158
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
A ++H + V L+D+Y++ G V +AR +F+ LR K SW A
Sbjct: 159 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 218
Query: 213 MITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
MI+G + + +A+ LF M + P F VLSAC + + G +++
Sbjct: 219 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK-- 276
Query: 272 HIDPSVQHYTC--MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+ S Y C +V L H G L A + M + D + L+N G+
Sbjct: 277 -LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLINGLSQCGY 329
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/506 (38%), Positives = 305/506 (60%), Gaps = 36/506 (7%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T L+ Y++ + NA ++FD IP +++ WN +I YA G Y+ A+EL+ +++ +
Sbjct: 161 TALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 220
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD T + AC+ +IE GR++H + + + +++ + ALID+Y+KC + A +
Sbjct: 221 PDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 280
Query: 131 FDKILERD---------------------------------PSEATLVTVISASADIAAL 157
F+ + +D P++ T+++++ A A + A+
Sbjct: 281 FEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 340
Query: 158 PQGRELHGF-SWRHRFELNVK-VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
GR +H + R + N ++T+L+DMYAKCG ++ A +F + K + SWNAMI
Sbjct: 341 DIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 400
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+AMHG + + D+F +M K+ ++PD ITFVG+LSACS G+ D GR F SM +DY +
Sbjct: 401 GFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMT 460
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P ++HY CM+DLLGHSG EA ++I M ++PD +W +LL +CK+HG+V+L E +
Sbjct: 461 PKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQN 520
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
LI++EP + G+YV+LSNIYA A W VA R L+ D+G+KK CS IE+ + H F+
Sbjct: 521 LIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFII 580
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD HP EIY L+ +E ++EAG+VP T V ++E + K + HSE+LAIAFGL
Sbjct: 581 GDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGL 640
Query: 455 INTPDGTRLLITKNLKICDDCHIAIK 480
I+T GT+L I KNL++C +CH A K
Sbjct: 641 ISTKPGTKLTIVKNLRVCRNCHEAYK 666
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 184/408 (45%), Gaps = 100/408 (24%)
Query: 21 DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
D L A +F+ I + NL +WN + R +A + A++LY ++ +GL+P+++TFPF L
Sbjct: 39 DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLL 98
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY---------------------- 118
K+C+ A +EG++IH V++ + D++V +LI MY
Sbjct: 99 KSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVV 158
Query: 119 ---------AKCSCVVNARQVFDKILERD------------------------------- 138
A + NA+++FD+I +D
Sbjct: 159 SYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN 218
Query: 139 --PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
P E+T+VTV+SA A ++ GR++H + H F N+K+ AL+D+Y+KCG ++ A
Sbjct: 219 VRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETAC 278
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGG 255
LFE L K V+SWN +I GY +AL LF++M + P+ +T + +L AC+ G
Sbjct: 279 GLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 338
Query: 256 LFDEGRMFF------------ESMVRDYHID--------------------PSVQHYTCM 283
D GR S +R ID S+ + M
Sbjct: 339 AIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAM 398
Query: 284 VDLLGHSGRLDEACDLIMQMR---VKPDPGVWGALLNSCKLHGHVKLA 328
+ GR D + D+ +MR ++PD + LL++C G + L
Sbjct: 399 IFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLG 446
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 145/325 (44%), Gaps = 28/325 (8%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + + L+ LYS C L A LF+ +P +++ WN LI Y Y+ A+ L+
Sbjct: 253 GFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLF 312
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR--NKWETDVFVGAALIDMYA 119
+L G P++ T L AC+ L AI+ GR IH + + + +LIDMYA
Sbjct: 313 QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYA 372
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALP-QGRELHGFSWRHRFELN--V 176
KC + A QVF+ IL + S S +A I GR F R N
Sbjct: 373 KCGDIEAAHQVFNSILHKSLS--------SWNAMIFGFAMHGRADASFDIFSRMRKNGIE 424
Query: 177 KVKTALVDMYAKC---GLVKVARNLFEQLRE-----KRVVSWNAMITGYAMHGHSTKALD 228
V + + C G++ + R++F + + ++ + MI G +A +
Sbjct: 425 PDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 484
Query: 229 LFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLG 288
+ M E++PD + + +L AC G + G F +++++ +P Y + ++
Sbjct: 485 MINTM--EMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPG--SYVLLSNIYA 540
Query: 289 HSGRLDEACD---LIMQMRVKPDPG 310
+GR +E + L+ +K PG
Sbjct: 541 TAGRWNEVANTRALLNDKGMKKVPG 565
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 140/307 (45%), Gaps = 40/307 (13%)
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
++ ++++ GL N+ ++ C LS +G V E ++ + + +A
Sbjct: 9 IHAQMIKTGLHNTNYALSKLIEFC-ILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHA 67
Query: 120 KCSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
S V+A +++ ++ P+ T ++ + A A +G+++HG + +L++
Sbjct: 68 LSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLY 127
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA------------------------- 212
V T+L+ MY + G ++ A +F++ + VVS+ A
Sbjct: 128 VHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKD 187
Query: 213 ------MITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
MI+GYA G+ +AL+LF + MK V+PD T V V+SAC++ G + GR
Sbjct: 188 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ-VH 246
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
S + D+ +++ ++DL G L+ AC L + K D W L+ + H+
Sbjct: 247 SWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYK-DVISWNTLIGG---YTHM 302
Query: 326 KLAELAL 332
L + AL
Sbjct: 303 NLYKEAL 309
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/540 (37%), Positives = 298/540 (55%), Gaps = 35/540 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+L T L+ +Y+ C L A ++FD +P RN W+ LI + A L+ +L
Sbjct: 159 LLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQ 218
Query: 68 GL-VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
GL + AL+AC++L + G ++H + ++ D+ G +L+ MYAK +
Sbjct: 219 GLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQ 278
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISASAD 153
A +FD++ +D P AT+V++I A +
Sbjct: 279 AIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSH 338
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+AAL GR HG + AL+DMYAKCG + ++R +F + + +VSWN M
Sbjct: 339 LAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTM 398
Query: 214 ITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I GY +HG +A LF +M + PD +TF+ +LSACS GL EG+ +F M Y
Sbjct: 399 IAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYG 458
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
+ P ++HY CMVDLL G LDEA + I M ++ D VW ALL +C+++ ++ L +
Sbjct: 459 LTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVS 518
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
+ EL P GN+V+LSNIY+ A ++ A++R + +G KKS CSWIE+ HAF
Sbjct: 519 RMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAF 578
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
+ GD SHP EIY +L + +K+ GY P T V D+E +EK + CHSE+LAIA+
Sbjct: 579 VGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAY 638
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
G+++ + + +TKNL++C DCH IK IS + R I VRD NR+HHFK+G CSCGD+W
Sbjct: 639 GILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 174/390 (44%), Gaps = 52/390 (13%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIE--LYYRLLE 66
++T L+ +Y C CL +A +F +P R+L WN ++ YA +G Y A+ L ++
Sbjct: 47 VSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQM 106
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR----------NKWETDVFVGAALID 116
L P+ T L + A+ +G +H IR +K V +G AL+D
Sbjct: 107 HRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLD 166
Query: 117 MYAKCSCVVNARQVFDKILERDP----------------------------------SEA 142
MYAKC ++ AR+VFD + R+ S
Sbjct: 167 MYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT 226
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
++ + + A A + L G +LH + ++ +L+ MYAK GL+ A LF+++
Sbjct: 227 SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 286
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGR 261
K VS++A+++GY +G + +A +F+KM+ V+PD T V ++ ACS GR
Sbjct: 287 AVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGR 346
Query: 262 MFFES-MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
S ++R + S+ ++D+ GR+D + + M D W ++
Sbjct: 347 CSHGSVIIRGLASETSI--CNALIDMYAKCGRIDLS-RQVFNMMPSRDIVSWNTMIAGYG 403
Query: 321 LHGHVKLAELALEKLIELE-PHDAGNYVIL 349
+HG K A ++ L P D ++ L
Sbjct: 404 IHGLGKEATALFLEMNNLGFPPDGVTFICL 433
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 153/334 (45%), Gaps = 60/334 (17%)
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P+N+TFPFALKACSAL+ GR IH I + D+FV AL+DMY KC+C+ +A
Sbjct: 6 VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65
Query: 129 QVFDKILERD-----------------------------------PSEATLVTVISASAD 153
+F + RD P+ +TLV ++ A
Sbjct: 66 HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125
Query: 154 IAALPQGRELHGFSWRHRFELN----------VKVKTALVDMYAKCGLVKVARNLFEQLR 203
AL QG +H + R N V + TAL+DMYAKCG + AR +F+ +
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP 185
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE----VQPDHITFVGVLSACSRGGLFDE 259
+ V+W+A+I G+ + T+A LF+ M + + P I L AC+ D
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACAS---LDH 240
Query: 260 GRMF--FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
RM +++ + + ++ + +G +D+A L +M VK D + AL++
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVS 299
Query: 318 SCKLHGHVKLAELALEKL--IELEPHDAGNYVIL 349
+G + A L +K+ +EP DA V L
Sbjct: 300 GYVQNGRAEEAFLVFKKMQACNVEP-DAATMVSL 332
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + L+ +Y+ C + + Q+F+ +P R++ WN +I Y +G + A L+
Sbjct: 356 GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALF 415
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
+ +G PD TF L ACS + EG+
Sbjct: 416 LEMNNLGFPPDGVTFICLLSACSHSGLVIEGK 447
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/503 (39%), Positives = 282/503 (56%), Gaps = 42/503 (8%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
LV LYS + A ++FD + +++ WN ++ Y +G + A+E++
Sbjct: 345 LVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFK---------- 394
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
P+ +N V V Y +A ++F+
Sbjct: 395 --VMPY----------------------KNDLSWMVMVSG-----YVHGGLSEDALKLFN 425
Query: 133 KILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCG 190
++ D P + T I+A ++ AL GR+LH + FE + AL+ MYAKCG
Sbjct: 426 QMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCG 485
Query: 191 LVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLS 249
V AR +F + VSWNAMI+ HGH +AL+LF++M E + PD I+F+ +L+
Sbjct: 486 AVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILT 545
Query: 250 ACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
AC+ GL DEG +FESM RD+ I P HY ++DLLG SGR+ EA DLI M +P P
Sbjct: 546 ACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTP 605
Query: 310 GVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLM 369
+W A+L+ C+ +G ++ A ++L + P G Y++LSN Y+ A W A++RKLM
Sbjct: 606 SIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLM 665
Query: 370 IDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVF 429
DRG+KK CSWIEV +K H FL GD HP E+Y L+ + RM++ GYVP T+ V
Sbjct: 666 RDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVL 725
Query: 430 HDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITERE 489
HD+E EK ++ HSE+LA+ FGL+ P G + + KNL+IC DCH A+ F+SK RE
Sbjct: 726 HDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGRE 785
Query: 490 ITVRDVNRYHHFKDGICSCGDYW 512
I VRDV R+HHFKDG CSCG+YW
Sbjct: 786 IVVRDVRRFHHFKDGECSCGNYW 808
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 145/323 (44%), Gaps = 50/323 (15%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
PV AT LV ++A L +A FD +P +R+ L N ++ A+A A+ +++ L
Sbjct: 94 PVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHAL 153
Query: 65 LEIG-LVPDNFTFPFALKACSALS--AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
L G L PD+++F + A + A ++H V+++ + V ALI +Y KC
Sbjct: 154 LGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKC 213
Query: 122 SCVV---NARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
+AR+V D++ ++D +W
Sbjct: 214 DTPEASWDARKVLDEMPDKD--------------------------DLTW---------- 237
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ 238
T +V Y + G V AR++FE++ K V WNAMI+GY G A +LF +M E
Sbjct: 238 -TTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKV 296
Query: 239 P-DHITFVGVLSACSRGGLFDEGRMFFESMVR---DYHIDPSVQHYTCMVDLLGHSGRLD 294
P D TF VLSAC+ G F G+ ++R ++ + ++ +V L G++
Sbjct: 297 PLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIV 356
Query: 295 EACDLIMQMRVKPDPGVWGALLN 317
A + M +K D W +L+
Sbjct: 357 IAKRIFDTMNLK-DVVSWNTILS 378
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 137/319 (42%), Gaps = 44/319 (13%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
++ A +F+ + + +WN +I Y +G A EL+ R++ + D FTF L A
Sbjct: 250 VNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSA 309
Query: 83 CSALSAIEEGRRIHEDVIRNK----WETDVFVGAALIDMYAKCSCVVNARQVFDKILERD 138
C+ G+ +H +IR + E + V AL+ +Y+K +V A+++FD + +D
Sbjct: 310 CANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKD 369
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
SW ++ Y G + A +
Sbjct: 370 V--------------------------VSW-----------NTILSGYIDSGCLDKAVEV 392
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLF 257
F+ + K +SW M++GY G S AL LF +M+ E V+P T+ G ++AC G
Sbjct: 393 FKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGAL 452
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
GR +V+ + S ++ + G +++A L+ + D W A+++
Sbjct: 453 KHGRQLHAHLVQ-CGFEASNSAGNALLTMYAKCGAVNDA-RLVFLVMPNLDSVSWNAMIS 510
Query: 318 SCKLHGHVKLAELALEKLI 336
+ HGH + A ++++
Sbjct: 511 ALGQHGHGREALELFDQMV 529
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF L+ +Y+ C +++A +F +P + WN +I A +G A+EL+
Sbjct: 466 GFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELF 525
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN---KWETDVFVGAALIDMY 118
+++ G+ PD +F L AC+ ++EG E + R+ D + A LID+
Sbjct: 526 DQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHY--ARLIDLL 583
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISA 150
+ + AR + K + +P+ + ++S
Sbjct: 584 GRSGRIGEARDLI-KTMPFEPTPSIWEAILSG 614
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/553 (36%), Positives = 323/553 (58%), Gaps = 42/553 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQ-RNLFLWNVLIRAYAWNGPYEVAIEL 60
G + + L+ YS L A ++F + + R+ WN ++ AY + A+EL
Sbjct: 168 GLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALEL 227
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
Y + GL+ D FT L A + + + G + H +I++ + + VG+ LID+Y+K
Sbjct: 228 YLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSK 287
Query: 121 CS-CVVNARQVFDKILERD----------------------------------PSEATLV 145
C C+++ R+VFD+I D P + +LV
Sbjct: 288 CGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLV 347
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELN-VKVKTALVDMYAKCGLVKVARNLFEQLRE 204
VISA +++++ QGR++HG + + N + V AL+ MY+KCG ++ A+ LF+ + E
Sbjct: 348 CVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPE 407
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMF 263
VS+N+MI GYA HG ++L LF++M + + P +ITF+ VL+AC+ G ++G+++
Sbjct: 408 HNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIY 467
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
F M + + I+P H++CM+DLLG +G+L EA LI + P W ALL +C++HG
Sbjct: 468 FNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHG 527
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
+V+LA A +L++L+P +A YV+L+NIY+ + A +RKLM DRG+KK CSWI
Sbjct: 528 NVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWI 587
Query: 384 EVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPG--TESVFHD--VENDEKAN 439
EV + H F++ D HP +I L+ + ++K+ GY P + SV D V E+
Sbjct: 588 EVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSASVGGDDRVWQREEEL 647
Query: 440 MICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYH 499
+ HSE+LA++FGL++T +G +L+ KNL+IC DCH AIK+IS++ +REITVRD +R+H
Sbjct: 648 RLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFH 707
Query: 500 HFKDGICSCGDYW 512
FKDG CSCG YW
Sbjct: 708 CFKDGQCSCGGYW 720
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 137/288 (47%), Gaps = 43/288 (14%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ Y+ + AHQLFD +PQ + +N LI AYA G + A +L+ + E L D
Sbjct: 80 LISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMD 139
Query: 73 NFTFPFALKACSALSAIEEG--RRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
FT + AC I G R++H + ++ V VG ALI Y+K + AR++
Sbjct: 140 GFTLSGIITAC----GINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRI 195
Query: 131 FDKILE-----------------RDPSEA-----------------TLVTVISASADIAA 156
F + E R+ S+A TL +V++A ++
Sbjct: 196 FHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQD 255
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV-ARNLFEQLREKRVVSWNAMIT 215
L G + H + + N V + L+D+Y+KCG + R +F+++ +V WN MI+
Sbjct: 256 LLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMIS 315
Query: 216 GYAMHGH-STKALDLFEKMKDEV-QPDHITFVGVLSACSRGGLFDEGR 261
GY+++ S +AL+ F +++ +PD + V V+SACS +GR
Sbjct: 316 GYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGR 363
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 38/178 (21%)
Query: 75 TFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI 134
+F LK C A + G+ +H I++ T ++ + +Y+KC + AR+VFD
Sbjct: 10 SFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFD-- 67
Query: 135 LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV 194
H + NV L+ YAK V+V
Sbjct: 68 -----------------------------------HTHDCNVFSFNTLISAYAKESYVEV 92
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSAC 251
A LF+++ + VS+N +I YA G + A LF +M++ + D T G+++AC
Sbjct: 93 AHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITAC 150
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
L G+ LH + + + + +Y+KC + AR +F+ + V S+N +I+
Sbjct: 24 LRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISA 83
Query: 217 YAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGG-------LFDEGRMFFESM 267
YA + A LF++M QPD +++ +++A +R G LF E R F M
Sbjct: 84 YAKESYVEVAHQLFDEMP---QPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDM 138
>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g40410, mitochondrial; Flags: Precursor
gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/524 (38%), Positives = 295/524 (56%), Gaps = 37/524 (7%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL--EIGLVPDNFTFPFALKAC 83
A +LFD +P+R+L WN LI Y+ G E+ R++ E+G P+ TF + AC
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI--------- 134
+ EEGR IH V++ +V V A I+ Y K + ++ ++F+ +
Sbjct: 145 VYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWN 204
Query: 135 ------------------------LERDPSEATLVTVISASADIAALPQGRELHGFSWRH 170
+ +P +AT + V+ + D+ + + +HG
Sbjct: 205 TMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFG 264
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
F N + TAL+D+Y+K G ++ + +F ++ ++W AM+ YA HG A+ F
Sbjct: 265 GFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHF 324
Query: 231 EKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGH 289
E M + PDH+TF +L+ACS GL +EG+ +FE+M + Y IDP + HY+CMVDLLG
Sbjct: 325 ELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGR 384
Query: 290 SGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVIL 349
SG L +A LI +M ++P GVWGALL +C+++ +L A E+L ELEP D NYV+L
Sbjct: 385 SGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVML 444
Query: 350 SNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKL 409
SNIY+ + W+ +++R LM +G+ ++ CS+IE NK H F+ GD SHP ++I KL
Sbjct: 445 SNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKL 504
Query: 410 KWLEGRMK-EAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKN 468
K + +MK E GY TE V HDV D K MI HSE++A+AFGL+ ++I KN
Sbjct: 505 KEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKN 564
Query: 469 LKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+IC DCH K IS I +R I +RD R+HHF DG CSC DYW
Sbjct: 565 LRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 48/231 (20%)
Query: 141 EATLVTVISASADIAALPQGRELH-----GFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
+A + ++I+A ++ R LH S+RH F + LV Y + G A
Sbjct: 31 DANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGF-----IGDQLVGCYLRLGHDVCA 85
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEV--QPDHITFVGVLSACS 252
LF+++ E+ +VSWN++I+GY+ G+ K ++ +M EV +P+ +TF+ ++SAC
Sbjct: 86 EKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACV 145
Query: 253 RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK------ 306
GG +EGR +V + + V+ ++ G +G L +C L + +K
Sbjct: 146 YGGSKEEGRC-IHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWN 204
Query: 307 ----------------------------PDPGVWGALLNSCKLHGHVKLAE 329
PD + A+L SC+ G V+LA+
Sbjct: 205 TMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQ 255
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 136/311 (43%), Gaps = 35/311 (11%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
++ Y L ++ +LF+ + +NL WN +I + NG E + + +G PD
Sbjct: 175 FINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPD 234
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
TF L++C + + + IH ++ + + + AL+D+Y+K + ++ VF
Sbjct: 235 QATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFH 294
Query: 133 KILERDPSEATLVTVISASADIAALPQGRELHGF---SWRHRFELNVKVK--------TA 181
+I D T + A+ HGF + +H FEL V T
Sbjct: 295 EITSPDSMAWTAMLAAYAT------------HGFGRDAIKH-FELMVHYGISPDHVTFTH 341
Query: 182 LVDMYAKCGLVKVARNLFEQLREK-----RVVSWNAMITGYAMHGHSTKALDLFEKMKDE 236
L++ + GLV+ ++ FE + ++ R+ ++ M+ G A L ++M
Sbjct: 342 LLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMP-- 399
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP-SVQHYTCMVDLLGHSGRLDE 295
++P + +L AC ++ + ++ ++ R + ++P ++Y + ++ SG +
Sbjct: 400 MEPSSGVWGALLGACR---VYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKD 456
Query: 296 ACDLIMQMRVK 306
A + M+ K
Sbjct: 457 ASRIRNLMKQK 467
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 102/226 (45%), Gaps = 13/226 (5%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + T L+ LYS L ++ +F I + W ++ AYA +G AI+ +
Sbjct: 265 GFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHF 324
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMYA 119
++ G+ PD+ TF L ACS +EEG+ E + ++ D + + ++D+
Sbjct: 325 ELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFE-TMSKRYRIDPRLDHYSCMVDLLG 383
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL---NV 176
+ + +A + K + +PS ++ A + + +L + FEL +
Sbjct: 384 RSGLLQDAYGLI-KEMPMEPSSGVWGALLGA----CRVYKDTQLGTKAAERLFELEPRDG 438
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
+ L ++Y+ GL K A + +++K +V A Y HG+
Sbjct: 439 RNYVMLSNIYSASGLWKDASRIRNLMKQKGLV--RASGCSYIEHGN 482
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/554 (37%), Positives = 301/554 (54%), Gaps = 67/554 (12%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV-PDNFTFPFALKACS 84
A +++ I +F N +IR + +I LY + + P+ T F L+ACS
Sbjct: 85 ALSIYNSISHPTVFATNNMIRCFVKGDLPRHSISLYSHMCRSFVAAPNKHTLTFVLQACS 144
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDM--------------------------- 117
AI EG ++ VI+ + DVFV ALI +
Sbjct: 145 NAFAIREGAQVQTHVIKLGFVKDVFVRNALIHLYCTCCRVESAKQVFDEVPSSRDVVSWN 204
Query: 118 -----YAKCSCVVNARQVFDKILERD---------------------------------P 139
+ + + A+++F ++ E+D P
Sbjct: 205 SMIVGFVRLGQISVAQKLFVEMPEKDVISWGTIISGCVQNGELEKALDYFKELGEQKLRP 264
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF 199
+EA LV++++A+A + L G+ +H + RF + + TALVDMYAKCG + +R LF
Sbjct: 265 NEAILVSLLAAAAQLGTLEYGKRIHSIANSLRFPMTASLGTALVDMYAKCGCIDESRFLF 324
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEK-MKDEVQPDHITFVGVLSACSRGGLFD 258
+++ EK SWN MI G A HG +AL LFEK + P ++TF+GVL+ACSR GL
Sbjct: 325 DRMPEKDKWSWNVMICGLATHGLGQEALALFEKFLTQGFHPVNVTFIGVLTACSRAGLVS 384
Query: 259 EGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS 318
EG+ FF+ M Y I+P ++HY CMVDLL +G + +A ++I +M PDP +W ++L S
Sbjct: 385 EGKHFFKLMTDTYGIEPEMEHYGCMVDLLSRAGFVYDAVEMINRMPAPPDPVLWASVLGS 444
Query: 319 CKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
C++HG ++L E KLI+++P G+YV L+ I+AR WE V+K+R+LM +R K
Sbjct: 445 CQVHGFIELGEEIGNKLIQMDPTHNGHYVQLARIFARLRKWEDVSKVRRLMAERNSNKIA 504
Query: 379 ACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKA 438
S IE + + H F++GD H EIY L+ + R+ AGY SV HD+E +EK
Sbjct: 505 GWSLIEAEGRVHRFVAGDKEHERTTEIYKMLEIMGVRIAAAGYSANVSSVLHDIEEEEKE 564
Query: 439 NMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRY 498
N I HSERLAIAFGL+ T DG + I KNL++C DCH K IS + EREI VRD +R+
Sbjct: 565 NAIKEHSERLAIAFGLLVTKDGDCIRIIKNLRVCGDCHEVSKIISLVFEREIIVRDGSRF 624
Query: 499 HHFKDGICSCGDYW 512
HHFK GICSC DYW
Sbjct: 625 HHFKKGICSCQDYW 638
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 24/212 (11%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F L T LV +Y+ C C+ + LFDR+P+++ + WNV+I A +G + A+ L+
Sbjct: 297 FPMTASLGTALVDMYAKCGCIDESRFLFDRMPEKDKWSWNVMICGLATHGLGQEALALFE 356
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGR---RIHEDVIRNKWETDVFVGAALIDMYA 119
+ L G P N TF L ACS + EG+ ++ D + E + + ++D+ +
Sbjct: 357 KFLTQGFHPVNVTFIGVLTACSRAGLVSEGKHFFKLMTDTYGIEPEMEHY--GCMVDLLS 414
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
+ V +A ++ +++ P + L + S ++HGF EL ++
Sbjct: 415 RAGFVYDAVEMINRM--PAPPDPVLWASVLGSC---------QVHGF-----IELGEEIG 458
Query: 180 TALVDMYAKCG--LVKVARNLFEQLREKRVVS 209
L+ M V++AR +F +LR+ VS
Sbjct: 459 NKLIQMDPTHNGHYVQLAR-IFARLRKWEDVS 489
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/538 (37%), Positives = 296/538 (55%), Gaps = 34/538 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L+ LV +Y C L A ++FD + +N+F W +L+ + +G AI+L++R+ + G
Sbjct: 78 LSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEG 137
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+PD + +C A A+ +GR IH ++D+ A+I+MY KC + A
Sbjct: 138 ELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAF 197
Query: 129 QVFDKILERD----------------PSEA-----------------TLVTVISASADIA 155
VF ++ E++ EA T V+V+ A +
Sbjct: 198 AVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVG 257
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL G+ LH + ++ V LV+MY KCG AR++F+ + EK VVSWNAM+
Sbjct: 258 ALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLA 317
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
Y +G S +AL LF+ M E V+P+ ITFV +L CS G F + F M +D+ I
Sbjct: 318 AYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGIT 377
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P H+ C++D+LG SG+L+EA +LI M V D +W +LL +C H A A E+
Sbjct: 378 PREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTHKDEDRAARAAEE 437
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
+ EP A Y++LSN+YA W+ AK+RK M G++K SWIE+ + H F++
Sbjct: 438 AFQREPRCAAAYIMLSNLYAALKKWDEAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVA 497
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD+ HP+ I+ L+ L M+ GY P + V H +E +EK ++ HSE+LA+AFG+
Sbjct: 498 GDSIHPDKSRIFKTLQRLMSEMRIKGYEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGI 557
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+TP T L I KNL++C DCH AIKFIS + R ITVRD NR+HHF G CSCGDYW
Sbjct: 558 ASTPPRTPLCIVKNLRVCSDCHSAIKFISGVEGRRITVRDSNRFHHFDRGECSCGDYW 615
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 144/307 (46%), Gaps = 40/307 (13%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
++ C+ A+EEGRRIH + + F+ L+DMY KC +V A++VFD + ++
Sbjct: 48 IRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNV 107
Query: 139 --------------------------------PSEATLVTVISASADIAALPQGRELHGF 166
P L+ I + AL QGRE+H
Sbjct: 108 FSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSA 167
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ + ++ A+++MY KCG + A +F ++ EK V+SW+ MI + + + +A
Sbjct: 168 AASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEA 227
Query: 227 LDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
L F+ M+ E ++ D IT+V VL A + G + G+ +V +D S+ +V+
Sbjct: 228 LLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVY-AGLDTSIVVGNTLVN 286
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE---PHD 342
+ G G D+A D+ M V+ + W A+L + +G + A LAL ++LE P+D
Sbjct: 287 MYGKCGSPDDARDVFDSM-VEKNVVSWNAMLAAYGQNGRSREA-LALFDSMDLEGVRPND 344
Query: 343 AGNYVIL 349
IL
Sbjct: 345 ITFVTIL 351
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/553 (36%), Positives = 319/553 (57%), Gaps = 42/553 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQ-RNLFLWNVLIRAYAWNGPYEVAIEL 60
G + + L+ YS L A ++F + + R+ WN ++ AY + A+EL
Sbjct: 168 GLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALEL 227
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
Y + GL+ D FT L A + + + G + H +I++ + + VG+ LID+Y+K
Sbjct: 228 YLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSK 287
Query: 121 CS-CVVNARQVFDKILERD----------------------------------PSEATLV 145
C C+++ R+VFD+I D P + +LV
Sbjct: 288 CGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLV 347
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELN-VKVKTALVDMYAKCGLVKVARNLFEQLRE 204
VISA +++++ QGR++HG + + N + V AL+ MY+KCG ++ A+ LF+ + E
Sbjct: 348 CVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPE 407
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMF 263
VS+N+MI GYA HG ++L LF++M + P +ITF+ VL+AC+ G ++G+++
Sbjct: 408 HNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIY 467
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
F M + + I+P H++CM+DLLG +G+L EA LI + P W ALL +C++HG
Sbjct: 468 FNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHG 527
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
+V+LA A +L++L+P +A YV+L+NIY+ + A +RKLM DRG+KK CSWI
Sbjct: 528 NVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWI 587
Query: 384 EVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVF----HDVENDEKAN 439
EV + H F++ D HP +I L+ + ++K+ GY P S V E+
Sbjct: 588 EVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQREEEL 647
Query: 440 MICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYH 499
+ HSE+LA++FGL++T +G +L+ KNL+IC DCH AIK+IS++ +REITVRD +R+H
Sbjct: 648 RLGHHSEKLAVSFGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFH 707
Query: 500 HFKDGICSCGDYW 512
FKDG CSCG YW
Sbjct: 708 CFKDGQCSCGGYW 720
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 137/288 (47%), Gaps = 43/288 (14%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ Y+ + AHQLFD +PQ + +N LI AYA G + A +L+ + E L D
Sbjct: 80 LISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMD 139
Query: 73 NFTFPFALKACSALSAIEEG--RRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
FT + AC I G R++H + ++ V VG ALI Y+K + AR++
Sbjct: 140 GFTLSGIITAC----GINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRI 195
Query: 131 FDKILE-----------------RDPSEA-----------------TLVTVISASADIAA 156
F + E R+ S+A TL +V++A ++
Sbjct: 196 FHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQD 255
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV-ARNLFEQLREKRVVSWNAMIT 215
L G + H + + N V + L+D+Y+KCG + R +F+++ +V WN MI+
Sbjct: 256 LLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMIS 315
Query: 216 GYAMHGH-STKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGR 261
GY+++ S +AL+ F +++ +PD + V V+SACS +GR
Sbjct: 316 GYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGR 363
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 38/173 (21%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP 139
LK C A + G+ +H I++ T ++ + +Y+KC + AR+VFD
Sbjct: 15 LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFD------- 67
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF 199
H + NV L+ YAK V+VA LF
Sbjct: 68 ------------------------------HTHDCNVFSFNTLISAYAKESYVEVAHQLF 97
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSAC 251
+++ + VS+N +I YA G + A LF +M++ + D T G+++AC
Sbjct: 98 DEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITAC 150
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
L G+ LH + + + + +Y+KC + AR +F+ + V S+N +I+
Sbjct: 24 LRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISA 83
Query: 217 YAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGG-------LFDEGRMFFESM 267
YA + A LF++M QPD +++ +++A +R G LF E R F M
Sbjct: 84 YAKESYVEVAHQLFDEMP---QPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDM 138
>gi|125557337|gb|EAZ02873.1| hypothetical protein OsI_25005 [Oryza sativa Indica Group]
Length = 651
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/504 (40%), Positives = 284/504 (56%), Gaps = 43/504 (8%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQ-RNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
LVH Y + ++FD +P+ R++ WN ++ Y G VA E++
Sbjct: 187 LVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGYVRAGMMTVAREVF---------- 236
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
E +R++ VG Y K + A VF
Sbjct: 237 ------------------------DEMPVRDEISWSTLVGG-----YVKEEELEVALGVF 267
Query: 132 DKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC 189
++E+ P++A +VT +SA+A + L G+ +H R + + V ALVDMYAKC
Sbjct: 268 RNMVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKC 327
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVL 248
G V VAR +F+ +R + V +WNAMI G A HG A++LFE+ E + P ++TFVGVL
Sbjct: 328 GCVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVL 387
Query: 249 SACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPD 308
+ CSR GL EGR +F+ +V Y I+P ++HY CMVDLLG +G + EA +LI M + PD
Sbjct: 388 NGCSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPD 447
Query: 309 PGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKL 368
P +WG +L+SCK HG V L KLIEL+P +G YV+LS IYA+A W+ V ++RKL
Sbjct: 448 PVLWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKL 507
Query: 369 MIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESV 428
M RG KS S +E K H FL GD H + +IY L + R+ EAGYVP SV
Sbjct: 508 MSSRGTNKSAGWSLMEAHGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPDVSSV 567
Query: 429 FHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITER 488
HD+ +EK + + HSERLAIA+G I G+ + I KNL++C DCH K ++ + +R
Sbjct: 568 LHDIGEEEKVHAVKVHSERLAIAYGFIVLEAGSPIRIVKNLRVCGDCHEFSKMVTMVFQR 627
Query: 489 EITVRDVNRYHHFKDGICSCGDYW 512
EI VRD +R+HH K+G CSC DYW
Sbjct: 628 EIIVRDGSRFHHMKEGKCSCLDYW 651
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/540 (37%), Positives = 298/540 (55%), Gaps = 35/540 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+L T L+ +Y+ C L A ++FD +P RN W+ LI + A L+ +L
Sbjct: 274 LLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQ 333
Query: 68 GL-VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
GL + AL+AC++L + G ++H + ++ D+ G +L+ MYAK +
Sbjct: 334 GLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQ 393
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISASAD 153
A +FD++ +D P AT+V++I A +
Sbjct: 394 AIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSH 453
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+AAL GR HG + AL+DMYAKCG + ++R +F + + +VSWN M
Sbjct: 454 LAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTM 513
Query: 214 ITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I GY +HG +A LF +M + PD +TF+ +LSACS GL EG+ +F M Y
Sbjct: 514 IAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYG 573
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
+ P ++HY CMVDLL G LDEA + I M ++ D VW ALL +C+++ ++ L +
Sbjct: 574 LTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVS 633
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
+ EL P GN+V+LSNIY+ A ++ A++R + +G KKS CSWIE+ HAF
Sbjct: 634 RMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAF 693
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
+ GD SHP EIY +L + +K+ GY P T V D+E +EK + CHSE+LAIA+
Sbjct: 694 VGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAY 753
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
G+++ + + +TKNL++C DCH IK IS + R I VRD NR+HHFK+G CSCGD+W
Sbjct: 754 GILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 181/382 (47%), Gaps = 62/382 (16%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVA--IELYYRLLEIGLVPDNFTFPFAL 80
L AH LFD+IP ++ +N LIRAY+ + P A + LY R+L + P+N+TFPFAL
Sbjct: 73 LSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFAL 132
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD-- 138
KACSAL+ GR IH I + D+FV AL+DMY KC+C+ +A +F + RD
Sbjct: 133 KACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLV 192
Query: 139 ---------------------------------PSEATLVTVISASADIAALPQGRELHG 165
P+ +TLV ++ A AL QG +H
Sbjct: 193 AWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHA 252
Query: 166 FSWRHRFELN----------VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+ R N V + TAL+DMYAKCG + AR +F+ + + V+W+A+I
Sbjct: 253 YCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIG 312
Query: 216 GYAMHGHSTKALDLFEKMKDE----VQPDHITFVGVLSACSRGGLFDEGRMF--FESMVR 269
G+ + T+A LF+ M + + P I L AC+ D RM +++
Sbjct: 313 GFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACAS---LDHLRMGEQLHALLA 367
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+ + ++ + +G +D+A L +M VK D + AL++ +G + A
Sbjct: 368 KSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSGYVQNGRAEEAF 426
Query: 330 LALEKL--IELEPHDAGNYVIL 349
L +K+ +EP DA V L
Sbjct: 427 LVFKKMQACNVEP-DAATMVSL 447
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 174/390 (44%), Gaps = 52/390 (13%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIE--LYYRLLE 66
++T L+ +Y C CL +A +F +P R+L WN ++ YA +G Y A+ L ++
Sbjct: 162 VSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQM 221
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR----------NKWETDVFVGAALID 116
L P+ T L + A+ +G +H IR +K V +G AL+D
Sbjct: 222 HRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLD 281
Query: 117 MYAKCSCVVNARQVFDKILERDP----------------------------------SEA 142
MYAKC ++ AR+VFD + R+ S
Sbjct: 282 MYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT 341
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
++ + + A A + L G +LH + ++ +L+ MYAK GL+ A LF+++
Sbjct: 342 SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 401
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGR 261
K VS++A+++GY +G + +A +F+KM+ V+PD T V ++ ACS GR
Sbjct: 402 AVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGR 461
Query: 262 MFFES-MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
S ++R + S+ ++D+ GR+D + + M D W ++
Sbjct: 462 CSHGSVIIRGLASETSI--CNALIDMYAKCGRIDLS-RQVFNMMPSRDIVSWNTMIAGYG 518
Query: 321 LHGHVKLAELALEKLIELE-PHDAGNYVIL 349
+HG K A ++ L P D ++ L
Sbjct: 519 IHGLGKEATALFLEMNNLGFPPDGVTFICL 548
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + L+ +Y+ C + + Q+F+ +P R++ WN +I Y +G + A L+
Sbjct: 471 GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALF 530
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
+ +G PD TF L ACS + EG+
Sbjct: 531 LEMNNLGFPPDGVTFICLLSACSHSGLVIEGK 562
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/519 (39%), Positives = 308/519 (59%), Gaps = 15/519 (2%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQR----NLFLWNVLIRAYAWNGPYEV 56
G F + LV +Y + L +A ++FD P+ ++ +WNVLI Y G
Sbjct: 169 FGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVK 228
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
A EL+ + P T + + + GR +++ E +V +++
Sbjct: 229 ATELFDSM------PKKDTGSWNSLINGFMKMGDMGRA--KELFVKMPEKNVVSWTTMVN 280
Query: 117 MYAKCSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFEL 174
+++ A + F +LE P++ T+V+ +SA A I AL G +H + + F+L
Sbjct: 281 GFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKL 340
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
N+ + TALVDMYAKCG ++ A +F + +EK ++ W+ MI G+A+HGH KAL FE MK
Sbjct: 341 NLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMK 400
Query: 235 -DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
+PD + F+ VL+ACS G +EG FF++M R Y I+PS++HYT +VD+LG +GRL
Sbjct: 401 FTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRL 460
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIY 353
DEA I M + PD VWGAL +C+ H +V++AELA +KL++LEP G+YV LSN Y
Sbjct: 461 DEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAY 520
Query: 354 ARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLE 413
A W+ ++R M D G K S+IEV +K H F++GD +H EIY+KL +
Sbjct: 521 ASVGRWDDAERVRVSMRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLDEIS 580
Query: 414 GRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICD 473
+E GY E V H++E +EK + HSE+LA+AFG+++T GT + I KNL++C
Sbjct: 581 ASAREKGYTKEIECVLHNIEEEEKEEALGYHSEKLALAFGIVSTRPGTTVRIVKNLRVCV 640
Query: 474 DCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
DCH +K+ SK+++REI +RD+ R+HHF DG+CSCGDYW
Sbjct: 641 DCHSFMKYASKMSKREIILRDMKRFHHFNDGVCSCGDYW 679
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 164/327 (50%), Gaps = 17/327 (5%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T+ + S+ + + A +F R +N +L+N LIR A N +E +I + +L+
Sbjct: 76 VVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAENSRFESSISFFVLMLKWK 135
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD TFPF LK+ +ALS GR +H +++ E D FV +L+DMY K + +A
Sbjct: 136 ISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSAL 195
Query: 129 QVFDKILERDPSEATLV--TVISASADIAALPQGRELHGFSWRHRFELNVKVKT----AL 182
+VFD+ E + + L+ +I + L + EL F+ K T +L
Sbjct: 196 KVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATEL--------FDSMPKKDTGSWNSL 247
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDH 241
++ + K G + A+ LF ++ EK VVSW M+ G++ +G KAL+ F M +E +P+
Sbjct: 248 INGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPND 307
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
T V LSAC++ G D G + + + ++ T +VD+ G ++ A +
Sbjct: 308 YTIVSALSACAKIGALDAG-LRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFH 366
Query: 302 QMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ + K +W ++ +HGH + A
Sbjct: 367 ETKEK-GLLIWSVMIWGWAIHGHFRKA 392
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/512 (37%), Positives = 308/512 (60%), Gaps = 30/512 (5%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ LV +Y+ C + A ++FDRI ++++ WN ++ Y+ G +E A+ L+ ++ E
Sbjct: 50 VGNALVDMYAKCGMVDEASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREEN 109
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC--VVN 126
+ + ++ + A + +G +D++ + +
Sbjct: 110 IELNVVSWSAVIAAFAQRG----------------------LGCETLDVFREMQHGEAND 147
Query: 127 ARQVFDKILERD----PSEATLVTVISASADIAALPQGRELHGFSWRHRFELN-VKVKTA 181
A ++F + ++D P+ T+ + A A +AAL GR++H + R+ F+ + V
Sbjct: 148 ALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILRNHFDSAFLYVANC 207
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPD 240
L+DMYAK G + VAR +F+ L++K VSW +++TGY MHG +AL++F++M+ +QPD
Sbjct: 208 LIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPD 267
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
+T + VL ACS G+ D+G FF SM +++ + P +HY CMVDLLG +GRL+EA +LI
Sbjct: 268 GVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELI 327
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
M+++P VW ALL+ C++H +V+L E A ++L+EL + G+Y +LSNIYA A W+
Sbjct: 328 EGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSENDGSYTLLSNIYANARRWK 387
Query: 361 GVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAG 420
VA++R LM + GI+K CSW++ K F D +HP +IY L+ L R+K G
Sbjct: 388 DVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHPQSKQIYEILRSLTQRIKVLG 447
Query: 421 YVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIK 480
YVP T HDV+++EK +++ HSE+LA+A+G++ + G + ITKNL++C DCH AI
Sbjct: 448 YVPETSFALHDVDDEEKVDLLFEHSEKLALAYGILISAPGAPIRITKNLRVCGDCHNAIT 507
Query: 481 FISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+IS I + EI +RD +R+HHFK G CSC YW
Sbjct: 508 YISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 117/270 (43%), Gaps = 56/270 (20%)
Query: 135 LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV 194
++ P +LV V+ A A + A G+ +HG + R ++ V ALVDMYAKCG+V
Sbjct: 7 IDMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDE 66
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE------------------ 236
A +F++++EK VVSWNAM+ GY+ G AL LFEKM++E
Sbjct: 67 ASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQ 126
Query: 237 -----------------------------------VQPDHITFVGVLSACSRGGLFDEGR 261
V+P+ T L AC+R GR
Sbjct: 127 RGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGR 186
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
++R++ + C++D+ SG +D A + ++ K + W +L+ +
Sbjct: 187 QIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQK-NFVSWTSLMTGYGM 245
Query: 322 HGHVKLAELALEKL--IELEPHDAGNYVIL 349
HG K A +++ + L+P V+L
Sbjct: 246 HGRGKEALEVFDEMRRVGLQPDGVTLLVVL 275
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/569 (36%), Positives = 301/569 (52%), Gaps = 73/569 (12%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V L+ +Y+ C CL A ++F + + + WN LI G E A+ L+ ++
Sbjct: 314 VFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRS 373
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC---- 123
+V D F P L CS G +H I++ + VG A+I MYAKC
Sbjct: 374 SVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKA 433
Query: 124 ---------------------------VVNARQVFDKILERD------------------ 138
+ AR FD + ER+
Sbjct: 434 DLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSE 493
Query: 139 ---------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALV 183
P T T I A AD+A + G ++ + + LNV V ++V
Sbjct: 494 EGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIV 553
Query: 184 DMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHI 242
MY++CGL+K A+N F+ + +K ++SWNAM+ +A +G K +D FE M K E +P+HI
Sbjct: 554 TMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHI 613
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
++V VLS CS GL EG+ +F+SM R + I P+ +H++CMVDLLG +G L++A DLI
Sbjct: 614 SYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEG 673
Query: 303 MRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGV 362
M KP+ VW ALL SC++H ++LAE A +KL+EL+ + YV+LSN+Y+ + + V
Sbjct: 674 MPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNV 733
Query: 363 AKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYV 422
A +RKLM +GI+ S CSWIEV N+ H F + SHP E+Y KL+ + +++ G
Sbjct: 734 ADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTGKY 793
Query: 423 PGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFI 482
ES H + HSE+LA AFGL+N P + + KNL++CDDCH+ IK +
Sbjct: 794 ITVESSVHRSKK--------YHSEKLAFAFGLLNLPSWMPIHVMKNLRVCDDCHLVIKLL 845
Query: 483 SKITEREITVRDVNRYHHFKDGICSCGDY 511
S +T RE+ +RD R+HHFKDGICSC DY
Sbjct: 846 SLVTSRELIMRDGYRFHHFKDGICSCKDY 874
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 158/377 (41%), Gaps = 67/377 (17%)
Query: 12 KLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
+++ YS + A Q+F+R+P+R+ WN LI ++ +G + ++ + G P
Sbjct: 217 SMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSP 276
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
+ T+ L AC++ S ++ G +H ++R + D+ G LIDMYAKC C+ A++VF
Sbjct: 277 NFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVF 336
Query: 132 DKILERDP---------------------------------SEATLVTVISASADIAALP 158
+ E D E L T++ +
Sbjct: 337 KSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYAS 396
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKC----------------------------- 189
G LHG++ + + V A++ MYAKC
Sbjct: 397 TGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFS 456
Query: 190 --GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVG 246
G + AR F+ + E+ +V+WN+M++ Y +G S + L L+ M+ VQPD ITF
Sbjct: 457 RSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTT 516
Query: 247 VLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK 306
+ AC+ + G M + + + +V +V + G + EA + + K
Sbjct: 517 SIRACADLAIVKLG-MQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDK 575
Query: 307 PDPGVWGALLNSCKLHG 323
D W A+L + +G
Sbjct: 576 -DLISWNAMLAAFAQNG 591
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 159/425 (37%), Gaps = 104/425 (24%)
Query: 15 HLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRA--------------------------- 47
H+YS C H+A Q+F RN+F WN +IRA
Sbjct: 51 HMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSW 110
Query: 48 ------YAWNGPYEVAIELYYRLL----EIGLVPDNFTFPFALKACSALSAIEEGRRIHE 97
Y+ NG + + E + ++ + G D F+F +KAC +L ++H
Sbjct: 111 TTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHA 170
Query: 98 DVIRNKWETDVFVGAALIDMYAKCSCV-------------------------------VN 126
V + + + + +++ MY KC V
Sbjct: 171 LVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYK 230
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISASAD 153
A Q+F+++ ERD P+ T +V+SA A
Sbjct: 231 ALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACAS 290
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+ L G LH R L++ L+DMYAKCG + +A+ +F+ LRE +SWN++
Sbjct: 291 TSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSL 350
Query: 214 ITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
ITG G AL LF +M + V D +L CS G + ++
Sbjct: 351 ITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKS-G 409
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
+ S ++ + G D+A DL+ ++ + W A++ + G + A
Sbjct: 410 MGSSAPVGNAIITMYAKCGDTDKA-DLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYF 468
Query: 333 EKLIE 337
+ + E
Sbjct: 469 DMMPE 473
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + +A +V +YS C + A FD I ++L WN ++ A+A NG I+ +
Sbjct: 541 GLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTF 600
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR 101
+L+ P++ ++ L CS + + EG+ + + R
Sbjct: 601 EDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTR 640
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/540 (37%), Positives = 298/540 (55%), Gaps = 35/540 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+L T L+ +Y+ C L A ++FD +P RN W+ LI + A L+ +L
Sbjct: 274 LLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQ 333
Query: 68 GL-VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
GL + AL+AC++L + G ++H + ++ D+ G +L+ MYAK +
Sbjct: 334 GLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQ 393
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISASAD 153
A +FD++ +D P AT+V++I A +
Sbjct: 394 AIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSH 453
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+AAL GR HG + AL+DMYAKCG + ++R +F + + +VSWN M
Sbjct: 454 LAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTM 513
Query: 214 ITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I GY +HG +A LF +M + PD +TF+ +LSACS GL EG+ +F M Y
Sbjct: 514 IAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYG 573
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
+ P ++HY CMVDLL G LDEA + I M ++ D VW ALL +C+++ ++ L +
Sbjct: 574 LTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVS 633
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
+ EL P GN+V+LSNIY+ A ++ A++R + +G KKS CSWIE+ HAF
Sbjct: 634 RMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAF 693
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
+ GD SHP EIY +L + +K+ GY P T V D+E +EK + CHSE+LAIA+
Sbjct: 694 VGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAY 753
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
G+++ + + +TKNL++C DCH IK IS + R I VRD NR+HHFK+G CSCGD+W
Sbjct: 754 GILSLSEDKTIFVTKNLRVCGDCHTVIKHISLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 181/382 (47%), Gaps = 62/382 (16%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVA--IELYYRLLEIGLVPDNFTFPFAL 80
L AH LFD+IP ++ +N LIRAY+ + P A + LY R+L + P+N+TFPFAL
Sbjct: 73 LSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFAL 132
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD-- 138
KACSAL+ GR IH I + D+FV AL+DMY KC+C+ +A +F + RD
Sbjct: 133 KACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLV 192
Query: 139 ---------------------------------PSEATLVTVISASADIAALPQGRELHG 165
P+ +TLV ++ A AL QG +H
Sbjct: 193 AWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHA 252
Query: 166 FSWRHRFELN----------VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+ R N V + TAL+DMYAKCG + AR +F+ + + V+W+A+I
Sbjct: 253 YRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIG 312
Query: 216 GYAMHGHSTKALDLFEKMKDE----VQPDHITFVGVLSACSRGGLFDEGRMF--FESMVR 269
G+ + T+A LF+ M + + P I L AC+ D RM +++
Sbjct: 313 GFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACAS---LDHLRMGEQLHALLA 367
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+ + ++ + +G +D+A L +M VK D + AL++ +G + A
Sbjct: 368 KSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSGYVQNGRAEEAF 426
Query: 330 LALEKL--IELEPHDAGNYVIL 349
L +K+ +EP DA V L
Sbjct: 427 LVFKKMQACNVEP-DAATMVSL 447
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 174/390 (44%), Gaps = 52/390 (13%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIE--LYYRLLE 66
++T L+ +Y C CL +A +F +P R+L WN ++ YA +G Y A+ L ++
Sbjct: 162 VSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQM 221
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR----------NKWETDVFVGAALID 116
L P+ T L + A+ +G +H IR +K V +G AL+D
Sbjct: 222 HRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLD 281
Query: 117 MYAKCSCVVNARQVFDKILERDP----------------------------------SEA 142
MYAKC ++ AR+VFD + R+ S
Sbjct: 282 MYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT 341
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
++ + + A A + L G +LH + ++ +L+ MYAK GL+ A LF+++
Sbjct: 342 SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 401
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGR 261
K VS++A+++GY +G + +A +F+KM+ V+PD T V ++ ACS GR
Sbjct: 402 AVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGR 461
Query: 262 MFFES-MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
S ++R + S+ ++D+ GR+D + + M D W ++
Sbjct: 462 CSHGSVIIRGLASETSI--CNALIDMYAKCGRIDLS-RQVFNMMPSRDIVSWNTMIAGYG 518
Query: 321 LHGHVKLAELALEKLIELE-PHDAGNYVIL 349
+HG K A ++ L P D ++ L
Sbjct: 519 IHGLGKEATALFLEMNNLGFPPDGVTFICL 548
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + L+ +Y+ C + + Q+F+ +P R++ WN +I Y +G + A L+
Sbjct: 471 GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALF 530
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
+ +G PD TF L ACS + EG+
Sbjct: 531 LEMNNLGFPPDGVTFICLLSACSHSGLVIEGK 562
>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
Length = 653
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/577 (36%), Positives = 311/577 (53%), Gaps = 65/577 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRI---------------------PQRNLF 39
+GF V+AT L+HL++ C CL A +F + ++LF
Sbjct: 77 LGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYCGSLKDSKSLF 136
Query: 40 L---------WNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIE 90
L WN +I AY G + A L++R+ +G PD +TF L AC++ +E
Sbjct: 137 LTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLE 196
Query: 91 EGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------------ 138
+GR +H + ++ D + LI MY +C + +AR+ F I +++
Sbjct: 197 DGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSIEKKELGAWNTMLAAYA 256
Query: 139 ---------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
P T +V+ + A + AL +G+ +H S FE +V
Sbjct: 257 QFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVI 316
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE- 236
+ TALV+MYAKCG + A+ F+ + K VVSW+AMI A HGH+ +AL+L M +
Sbjct: 317 LGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQG 376
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+ + +T VL ACS GG EG +F + +D+ I+ ++ +DLLG +G L EA
Sbjct: 377 IAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEA 436
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARA 356
++ M K LL CK+HG V+ + ++++ LEP + G+YV+L+N+YA A
Sbjct: 437 EHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKAFTKRIVALEPENPGSYVLLNNMYAAA 496
Query: 357 ANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRM 416
W+ VAKLR+ M +G+K+ CS IE ++K + F GD S+P EI A+L+ L RM
Sbjct: 497 GRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRM 556
Query: 417 K-EAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDC 475
K E GYVP T VFHDV +D+K ++ HSE++A+ FGLI +P G+ L I KNL++C DC
Sbjct: 557 KEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDC 616
Query: 476 HIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
H K SKIT R I VRD R+HHF+ GICSCGDYW
Sbjct: 617 HTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 653
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 179/419 (42%), Gaps = 72/419 (17%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A Q+FDRI QRN F W++L+ Y N Y+ A+E+Y ++ + D +T L AC+
Sbjct: 1 ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTK 60
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI-LERD------ 138
L +EEGR + +E DV V +LI ++AKC C+ A VF + RD
Sbjct: 61 LLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTA 120
Query: 139 ----------PSEATLVT-----VISASADIAALP-QGRELHGFSWRHR----------- 171
S++ +T V+S +A IAA G + FS HR
Sbjct: 121 MIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIY 180
Query: 172 -----------------------------FELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
F+ + ++ L+ MY +CG ++ AR F +
Sbjct: 181 TFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSI 240
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR 261
+K + +WN M+ YA AL L++ M E PD TF V+ +C+ G EG+
Sbjct: 241 EKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGK 300
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
F + V T +V++ G L +A + K D W A++ +
Sbjct: 301 -FIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNK-DVVSWSAMIAASAQ 358
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN----WEGVAKLRKLMIDRGIKK 376
HGH + A L L L+ L+ A N V S++ ++ +EG+ L D GI++
Sbjct: 359 HGHAEEA-LELSHLMNLQGI-AQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIER 415
>gi|356537109|ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Glycine max]
Length = 630
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/547 (39%), Positives = 316/547 (57%), Gaps = 46/547 (8%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL-- 64
P + L++ Y+ C H+A ++FD +P + +N +I Y++N A+ L+ ++
Sbjct: 89 PYTRSSLINTYAKCSLHHHARKVFDEMPNPTI-CYNAMISGYSFNSKPLHAVCLFRKMRR 147
Query: 65 -----LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
L++ + + T + CS + + G +H +R + TD+ V +L+ MY
Sbjct: 148 EEEDGLDVDVNVNAVTLLSLVSGCSVATHLTIGVCLHGCCVRFGFVTDLAVANSLVTMYV 207
Query: 120 KCSCVVNARQVFDKILERD---------------------------------PSEATLVT 146
KC V AR+VFD++L RD TL+
Sbjct: 208 KCGEVELARKVFDEMLVRDLITWNAMISGYAQNGHARCVLEVYSEMKLSGVSADAVTLLG 267
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V+SA A++ A GRE+ R F N ++ ALV+MYA+CG + AR +F++ EK
Sbjct: 268 VMSACANLGAQGIGREVEREIERRGFGCNPFLRNALVNMYARCGNLTRAREVFDRSGEKS 327
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
VVSW A+I GY +HGH AL+LF++M + V+PD FV VLSACS GL D G +F+
Sbjct: 328 VVSWTAIIGGYGIHGHGEVALELFDEMVESAVRPDKTVFVSVLSACSHAGLTDRGLEYFK 387
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
M R Y + P +HY+C+VDLLG +GRL+EA +LI M+VKPD VWGALL +CK+H +
Sbjct: 388 EMERKYGLQPGPEHYSCVVDLLGRAGRLEEAVNLIKSMKVKPDGAVWGALLGACKIHKNA 447
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
++AELA + ++ELEP + G YV+LSNIY A N EGV+++R +M +R ++K S++E
Sbjct: 448 EIAELAFQHVVELEPTNIGYYVLLSNIYTDANNLEGVSRVRVMMRERKLRKDPGYSYVEY 507
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
K K + F SGD SHP +IY L LE +KE P E ++E HS
Sbjct: 508 KGKMNLFYSGDLSHPQTKQIYRMLDELESLVKEVH--PPNEKC--QGRSEELLIGTGVHS 563
Query: 446 ERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
E+LAIAF L+NT GT + + KNL++C DCH+ IK +SKI R+ VRD R+HHF+DGI
Sbjct: 564 EKLAIAFALLNTKSGTEITVMKNLRVCVDCHLFIKLVSKIVNRQFIVRDATRFHHFRDGI 623
Query: 506 CSCGDYW 512
CSC DYW
Sbjct: 624 CSCKDYW 630
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 183/407 (44%), Gaps = 81/407 (19%)
Query: 41 WNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVI 100
WN +R + Y A+ LY +L P+ FTFPF LK+C+ LS ++H VI
Sbjct: 22 WNNQLRQLSKQRQYREALTLYRHMLRSSFFPNTFTFPFLLKSCAFLSLPLAASQLHAHVI 81
Query: 101 RNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI-------------------------- 134
R + D + ++LI+ YAKCS +AR+VFD++
Sbjct: 82 RTGSQPDPYTRSSLINTYAKCSLHHHARKVFDEMPNPTICYNAMISGYSFNSKPLHAVCL 141
Query: 135 ---LERDPSEA----------TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
+ R+ + TL++++S + L G LHG R F ++ V +
Sbjct: 142 FRKMRREEEDGLDVDVNVNAVTLLSLVSGCSVATHLTIGVCLHGCCVRFGFVTDLAVANS 201
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPD 240
LV MY KCG V++AR +F+++ + +++WNAMI+GYA +GH+ L+++ +MK V D
Sbjct: 202 LVTMYVKCGEVELARKVFDEMLVRDLITWNAMISGYAQNGHARCVLEVYSEMKLSGVSAD 261
Query: 241 HITFVGVLSACS--------------------------RGGLFDE----GRMFFESMVRD 270
+T +GV+SAC+ R L + G + V D
Sbjct: 262 AVTLLGVMSACANLGAQGIGREVEREIERRGFGCNPFLRNALVNMYARCGNLTRAREVFD 321
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM---RVKPDPGVWGALLNSCKLHGHVKL 327
+ SV +T ++ G G + A +L +M V+PD V+ ++L++C H L
Sbjct: 322 RSGEKSVVSWTAIIGGYGIHGHGEVALELFDEMVESAVRPDKTVFVSVLSAC---SHAGL 378
Query: 328 AELALEKLIELEPH-----DAGNYVILSNIYARAANWEGVAKLRKLM 369
+ LE E+E +Y + ++ RA E L K M
Sbjct: 379 TDRGLEYFKEMERKYGLQPGPEHYSCVVDLLGRAGRLEEAVNLIKSM 425
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/546 (35%), Positives = 308/546 (56%), Gaps = 36/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G HP + + ++H+Y C + A ++FD + N+F +N +I + G + + +
Sbjct: 143 GLAEHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIV 202
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ D+ ++ L C++ + G ++H ++ + E +V+VG+AL+DMY KC
Sbjct: 203 RSMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKC 262
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
A +VF+ + E++ P+E T +
Sbjct: 263 DFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVAL 322
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
++ A +A L G L + + + V AL++MY+K G V+ AR +F + + VV
Sbjct: 323 NSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVV 382
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
SWN++I GYA HG + +A++ F M +EV P ++TF+GVLSAC++ GL DEG +
Sbjct: 383 SWNSIIIGYAHHGRAREAMEAFHDMLFAEEV-PSYVTFIGVLSACAQLGLVDEGFYYLNI 441
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
M+++ + P +HYTCMV LL GRLDEA I + D W +LL+SC+++ +
Sbjct: 442 MMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYG 501
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
L E++ +L+P D G YV+LSN+YA+A W+GV K+R+LM + G++K SWI+V
Sbjct: 502 LGHRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVG 561
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
++ H F S D HP ++I KL+ L ++K GYVP HDVE+++K + HSE
Sbjct: 562 SEVHVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSE 621
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
+LA+AFGLI TP G + I KN++ICDDCH+AIK IS T R I VRD R+H +DG+C
Sbjct: 622 KLALAFGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHCIEDGVC 681
Query: 507 SCGDYW 512
SC DYW
Sbjct: 682 SCDDYW 687
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 182/411 (44%), Gaps = 49/411 (11%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
F V L+ LY C L A Q+FD +P RN N+L+ YA +G + A+ L R+
Sbjct: 48 FDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALAL-LRV 106
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
+ GL + + A+ A + + + + GR+ H I+ +V +A++ MY +C+ +
Sbjct: 107 ADFGL--NEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHM 164
Query: 125 VNARQVFDKI---------------LERDPSEATL------------------VTVISAS 151
A +VFD + L+R + + V V+
Sbjct: 165 DEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHC 224
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
A + G ++H + + R ELNV V +ALVDMY KC A +FE L EK +VSW
Sbjct: 225 ASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWT 284
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
A++T Y + AL LF M+ E V+P+ T+ L++C+ G ++
Sbjct: 285 AIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKT 344
Query: 271 YH--IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
H + P ++++ SG +++A + + M + D W +++ HG + A
Sbjct: 345 GHWGLLPVC---NALMNMYSKSGSVEDARRVFLSMPCR-DVVSWNSIIIGYAHHGRAREA 400
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANW----EGVAKLRKLMIDRGIK 375
A ++ E + +YV + + A EG L +M + G+K
Sbjct: 401 MEAFHDMLFAE--EVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVK 449
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/575 (37%), Positives = 324/575 (56%), Gaps = 71/575 (12%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNG-PYEVAIELYYRLL 65
PV+A K + A L AH+LFD+IPQ +LF++N +I++++ + Y +I ++ L+
Sbjct: 211 PVIANKFLK-NVALASLTYAHKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLI 269
Query: 66 -EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
+ G P+ ++F FA AC + EG ++ ++ + +VFV ALI M+ K V
Sbjct: 270 RDSGYFPNRYSFVFAFGACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRV 329
Query: 125 VNARQV-------------------------------FDKILERD--------------- 138
+AR V FD++ ERD
Sbjct: 330 EDARNVFDSAVDRDFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVG 389
Query: 139 ------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
P+E T+V+ ++A +++ AL QG+ +H + R ++N ++
Sbjct: 390 CFMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLA 449
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKRVV-SWNAMITGYAMHGHSTKALDLFEKMK-DEVQ 238
+L+DMYAKCG + A ++F + + KR V WNAMI G+AMHG +A+++FEKMK ++V
Sbjct: 450 SLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVS 509
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
P+ +TF+ +L+ACS G + EG+ +FE M DY I+P ++HY CMVDLL SG L ++ +
Sbjct: 510 PNKVTFIALLNACSHGYMVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEE 569
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN 358
+I+ M + PD +WGALLN+C+++ ++ + E++P+ G V+L NIY+ +
Sbjct: 570 MILSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGR 629
Query: 359 WEGVAKLR-KLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK 417
W +R K I+ KK S IE+ H FL GD SHP EIY+ L + ++K
Sbjct: 630 WNEARMVREKNEINSDRKKIPGFSSIELNGVFHEFLVGDRSHPQSREIYSFLDEMISKLK 689
Query: 418 EAGYVPGTESVFHDVENDE-KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCH 476
AGYVP V D +++E K + HSE+LAIAFGL+NT GT + I KNL++C DCH
Sbjct: 690 IAGYVPELGEVLLDFDDEEDKETALSVHSEKLAIAFGLMNTAPGTPIRIVKNLRVCGDCH 749
Query: 477 IAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
A KFISK+ +R I VRD RYHHFKDGICSC DY
Sbjct: 750 QATKFISKVYDRVIIVRDRMRYHHFKDGICSCKDY 784
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/572 (36%), Positives = 307/572 (53%), Gaps = 77/572 (13%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P +A+ LV LY+ C C A +F+ + RN W VLI + +G + ++EL+ ++
Sbjct: 305 PYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRA 364
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC----- 121
+ D F + C + + GR++H +++ V V +LI MYAKC
Sbjct: 365 ELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQS 424
Query: 122 --------------------------SCVVNARQVFDKILERD----------------- 138
+ AR+ FD + ++
Sbjct: 425 AESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAE 484
Query: 139 -----------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
P T VT+ AD+ A G ++ G + + L+ V A
Sbjct: 485 EDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANA 544
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK-MKDEVQPD 240
++ MY+KCG + AR +F+ L K +VSWNAMITGY+ HG +A+++F+ +K +PD
Sbjct: 545 VITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPD 604
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
+I++V VLS CS GL EG+ +F+ M R ++I P ++H++CMVDLLG +G L EA DLI
Sbjct: 605 YISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLI 664
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
+M +KP VWGALL++CK+HG+ +LAELA + + EL+ D+G+Y++++ IYA A +
Sbjct: 665 DEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSD 724
Query: 361 GVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAG 420
A++RKLM D+GIKK+ SW+EV NK H F + D SHP I KL L ++ G
Sbjct: 725 DSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKIARLG 784
Query: 421 YVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIK 480
YV T+S ++ HSE+LA+AFGL++ P + I KNL+IC DCH IK
Sbjct: 785 YVR-TDSPRSEIH----------HSEKLAVAFGLMSLPAWMPIHIMKNLRICGDCHTVIK 833
Query: 481 FISKITEREITVRDVNRYHHFKDGICSCGDYW 512
IS +T RE +RD R+HHF G CSCGDYW
Sbjct: 834 LISSVTGREFVIRDAVRFHHFNGGSCSCGDYW 865
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 166/371 (44%), Gaps = 70/371 (18%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+A +LFD +P+R++ WN+++ A + +G A+++ + G+ D+ T+ +L AC+
Sbjct: 222 HALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACA 281
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP----- 139
LS++ G+++H VIRN D +V +AL+++YAKC C A+ VF+ + +R+
Sbjct: 282 RLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTV 341
Query: 140 ----------------------------SEATLVTVISASADIAALPQGRELHGFSWRHR 171
+ L T+IS L GR+LH +
Sbjct: 342 LIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSG 401
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
V V +L+ MYAKC ++ A ++F + EK +VSW +MIT ++ G+ KA + F+
Sbjct: 402 QIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFD 461
Query: 232 KM---------------------------------KDEVQPDHITFVGVLSACSRGGLFD 258
M + +V+PD +T+V + C+ G
Sbjct: 462 GMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANK 521
Query: 259 EGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
G V+ +D SV + ++ + GR+ EA + + VK D W A++
Sbjct: 522 LGDQIIGRTVKVGLILDTSVAN--AVITMYSKCGRILEARKVFDFLNVK-DIVSWNAMIT 578
Query: 318 SCKLHGHVKLA 328
HG K A
Sbjct: 579 GYSQHGMGKQA 589
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 138/314 (43%), Gaps = 68/314 (21%)
Query: 6 HPVLATKLVHL--YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
HP + T V L Y L +A +LF R+P R++ WN L+ Y + Y ++E +
Sbjct: 68 HPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVS 127
Query: 64 LLEIG-LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+ G P+ FTF +A+K+C AL ++ V + + D V AAL+DM+ +C
Sbjct: 128 MHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCG 187
Query: 123 C-------------------------------VVNARQVFDKILERD-PSEATLVTVISA 150
V +A ++FD + ERD S +V+ +S
Sbjct: 188 TVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQ 247
Query: 151 SADI--------------------------------AALPQGRELHGFSWRHRFELNVKV 178
S + ++L G++LH R+ ++ V
Sbjct: 248 SGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYV 307
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ 238
+ALV++YAKCG K A+ +F L ++ V+W +I G+ HG T++++LF +M+ E+
Sbjct: 308 ASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELM 367
Query: 239 P-DHITFVGVLSAC 251
D ++S C
Sbjct: 368 TLDQFALATLISGC 381
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 122/330 (36%), Gaps = 72/330 (21%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLF-DRIPQRNLFLWNVLIRAYAWNGPYEVAIE 59
+G L L+H Y +C L +A +L I N+ NV++ Y G A+E
Sbjct: 33 VGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGRLSDAVE 92
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
L+ R+ + N ++ L+++E +H
Sbjct: 93 LFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSG-------------------- 132
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
+ P+ T + + + +L G + + + V
Sbjct: 133 ----------------DSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVA 176
Query: 180 TALVDMYAKCGLVKVA--------------RN-----------------LFEQLREKRVV 208
ALVDM+ +CG V +A RN LF+ + E+ VV
Sbjct: 177 AALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVV 236
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWN M++ + G +ALD+ M+ + V+ D T+ L+AC+R G+ +
Sbjct: 237 SWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQV 296
Query: 268 VRDYH-IDPSVQHYTCMVDLLGHSGRLDEA 296
+R+ IDP V + +V+L G EA
Sbjct: 297 IRNLPCIDPYVA--SALVELYAKCGCFKEA 324
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 92/233 (39%), Gaps = 43/233 (18%)
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL 135
F AL++C A A+ R +H ++ + VF+ L+ Y C + +AR++
Sbjct: 7 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRL----- 61
Query: 136 ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
L+T DIA NV +++ Y K G + A
Sbjct: 62 --------LLT------DIA-----------------HPNVITHNVMLNGYVKLGRLSDA 90
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSR 253
LF ++ + V SWN +++GY +L+ F M + P+ TF + +C
Sbjct: 91 VELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSC-- 148
Query: 254 GGLFDEGRMFFE--SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
G E + + MV+ + +VD+ G +D A L ++++
Sbjct: 149 -GALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIK 200
>gi|242080213|ref|XP_002444875.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
gi|241941225|gb|EES14370.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
Length = 583
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/515 (40%), Positives = 290/515 (56%), Gaps = 36/515 (6%)
Query: 34 PQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
P + FL+ L RA A G A+ Y RLL L +F F KAC+ LSA+ G
Sbjct: 69 PSPDSFLFCSLTRAAARRGLPAAALAFYRRLLAAALPFSSFAFTSVAKACADLSALRAGM 128
Query: 94 RIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD--------------- 138
+H + + +D FV AL+ +Y+KC + AR++FD I +R
Sbjct: 129 GVHAHAVLLGFGSDRFVQTALVVLYSKCGKLDVARKLFDAIRDRSVVAWNAMISGYEQNG 188
Query: 139 ------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
P AT V +SA A AL G E+ R E+NV +
Sbjct: 189 LAGRAIEVYREMRVAGEAPDSATFVATLSACAQAGALDLGHEVERLIVSERMEMNVVLGA 248
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQP 239
ALV+MYA+CGLV AR F+ L+E+ VV+W +MI GY MHGH +A+ LF+ M+ + P
Sbjct: 249 ALVNMYARCGLVNKAREWFDMLQERNVVTWTSMIAGYGMHGHGGEAVKLFDLMRQQGPPP 308
Query: 240 DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
+ +TFV VLSAC+ GL +GR F SM Y + P +HY MVD+ G +G LD+A
Sbjct: 309 NDVTFVAVLSACAHAGLVSDGRDAFASMKSVYGLVPRAEHYCSMVDMYGRAGLLDDAMQF 368
Query: 300 IM-QMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN 358
I + +P P VW A+L +CK+H + L E+LI LEP + + V+LSNIYA +
Sbjct: 369 IHDSIPGEPGPEVWTAMLGACKMHKNFSLGVEVAERLIALEPENPSHRVLLSNIYALSGK 428
Query: 359 WEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKE 418
V K+R MI R +KK I S IE+ AH F G+ SHP EIY L+ L R+ +
Sbjct: 429 MNHVEKVRNTMIKRRLKKPIGYSLIEIGGVAHVFRMGEKSHPKTPEIYQYLEKLIHRITD 488
Query: 419 AGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTR-LLITKNLKICDDCHI 477
AGY+P T+SV H++E +E+ + H E+LA+AFGL+ T T + I KNL+IC DCH+
Sbjct: 489 AGYMPETDSVLHELEEEEREFALRYHGEKLAVAFGLMMTSGCTAPIRIIKNLRICGDCHL 548
Query: 478 AIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
AIK++S + REI VRD++R+HHFK G CSC +YW
Sbjct: 549 AIKYMSAVENREIIVRDMHRFHHFKAGKCSCQEYW 583
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/520 (36%), Positives = 301/520 (57%), Gaps = 34/520 (6%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P + L+ +Y+ C + +A F+ IP ++ L + +I YA + E A EL+ RL+
Sbjct: 298 PHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMR 357
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
++P+ ++ L+AC+ + ++ G++IH I+ E+D+FVG AL+D YAKC+ + +
Sbjct: 358 SSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDS 417
Query: 127 ARQVFDKILERDP---------------------------------SEATLVTVISASAD 153
+ ++F + + + ++ T +V+ A A
Sbjct: 418 SLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACAS 477
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
A++ ++H + F + + +L+D YAKCG ++ A +F+ L E+ ++SWNA+
Sbjct: 478 TASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAI 537
Query: 214 ITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I+GYA+HG + AL+LF++M K V+ + ITFV +LS CS GL + G F+SM D+
Sbjct: 538 ISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHG 597
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I PS++HYTC+V LLG +GRL++A I + P VW ALL+SC +H +V L +
Sbjct: 598 IKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSA 657
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
EK++E+EP D YV+LSN+YA A + + VA LRK M + G++K SW+E+K + HAF
Sbjct: 658 EKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAF 717
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
G HP+ I A L+WL + GY+P V HDV+ ++K M+ HSERLA+A+
Sbjct: 718 SVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAY 777
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITV 492
GL+ TP G + I KNL+ C DCH A ISKI +REI V
Sbjct: 778 GLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIV 817
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 188/415 (45%), Gaps = 40/415 (9%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + + + L+ YS C + +A +F+ I +++ +W ++ Y+ N E A +
Sbjct: 191 LGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRV 250
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ G P+ F LKA L ++ G+ IH I+ +T+ VG AL+DMYAK
Sbjct: 251 FSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAK 310
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C + +AR F+ I D P+E +L +V
Sbjct: 311 CGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSV 370
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A ++ L G+++H + + E ++ V AL+D YAKC + + +F LR+
Sbjct: 371 LQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANE 430
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSAC-SRGGLFDEGRMFFE 265
VSWN ++ G++ G +AL +F +M+ P +T+ VL AC S + G++
Sbjct: 431 VSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCS 490
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
++ D + + ++D G + +A + Q ++ D W A+++ LHG
Sbjct: 491 IEKSTFNNDTVIGN--SLIDTYAKCGYIRDALK-VFQHLMERDIISWNAIISGYALHGQA 547
Query: 326 KLAELALEKL--IELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
A +++ +E +D +LS + G++ + ID GIK S+
Sbjct: 548 ADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSM 602
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 138/297 (46%), Gaps = 34/297 (11%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
A L+++Y L +A +LFDR+P+RN+ + L++A+A G +E A L+ RL G
Sbjct: 99 ANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGH 158
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
+ F LK A+ A +H + + + FVG+ LID Y+ CS V +A
Sbjct: 159 EVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEH 218
Query: 130 VFDKILERD---------------------------------PSEATLVTVISASADIAA 156
VF+ I+ +D P+ L +V+ A+ + +
Sbjct: 219 VFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPS 278
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITG 216
+ G+ +HG + + + V AL+DMYAKCG +K AR FE + V+ + MI+
Sbjct: 279 VVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISR 338
Query: 217 YAMHGHSTKALDLFEK-MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
YA + +A +LF + M+ V P+ + VL AC+ D G+ ++ H
Sbjct: 339 YAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGH 395
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 139/351 (39%), Gaps = 89/351 (25%)
Query: 54 YEVAIE-LYYRLLEIGLVP-----DNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--E 105
Y A++ L L + ++P D+F L+ C A GR +H V+R
Sbjct: 34 YAAALQWLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGR 93
Query: 106 TDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASA------------- 152
D+F L++MY K + +AR++FD++ ER+ + VT++ A A
Sbjct: 94 LDLFCANVLLNMYGKLGPLASARRLFDRMPERN--MVSFVTLVQAHAQRGDFEAAAALFR 151
Query: 153 ------------------------DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
D A L G +H +W+ + N V + L+D Y+
Sbjct: 152 RLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGG--VHSCAWKLGHDHNAFVGSGLIDAYSL 209
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGV 247
C LV A ++F + K V W AM++ Y+ + A +F KM+ +P+ V
Sbjct: 210 CSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSV 269
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
L A + S+V I + C + L +
Sbjct: 270 LKAA----------VCLPSVVLGKGI------HGCAIKTLNDT----------------- 296
Query: 308 DPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN 358
+P V GALL+ G +K A LA E + P+D + ++LS + +R A
Sbjct: 297 EPHVGGALLDMYAKCGDIKDARLAFEMI----PYD--DVILLSFMISRYAQ 341
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/521 (37%), Positives = 298/521 (57%), Gaps = 43/521 (8%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A ++FD + +RN+ W +I Y N +VA +L E+ ++ L +
Sbjct: 191 AREIFDEMRERNVITWTTMITGYGQNKRVDVA----RKLFEVMPEKTEVSWTSMLLGYTL 246
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
IE+ E V+ K V A+I + +V AR+VFD++ +RD
Sbjct: 247 SGRIEDAEEFFE-VMPMK---PVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGM 302
Query: 139 --------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
PS +L++++S A +A+L GR++H R +F
Sbjct: 303 IKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQF 362
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
+ +V V + L+ MY KCG + A+ +F++ K ++ WN++I+GYA HG +AL +F +
Sbjct: 363 DGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHE 422
Query: 233 MK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
M P+ +T + +L+ACS GG +EG FESM + + P+V+HY+C VD+LG +G
Sbjct: 423 MPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAG 482
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSN 351
++D+A +LI M +KPD VWGALL +CK H + LAE+A +KL E+EP +AG Y++LS+
Sbjct: 483 KVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSS 542
Query: 352 IYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDA-SHPNCDEIYAKLK 410
I A + W VA++RK M + + K CSWIEV K H F G +HP I L+
Sbjct: 543 INASRSKWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTRGGIRNHPEQAMILMMLE 602
Query: 411 WLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLK 470
+G ++EAGY P V HDV+ +EK + + HSERLA+A+GL+ P+G + + KNL+
Sbjct: 603 KTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLR 662
Query: 471 ICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDY 511
+C DCH AIK ISK+TEREI +RD NR+HHF +G CSC DY
Sbjct: 663 VCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDY 703
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 132/301 (43%), Gaps = 23/301 (7%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
++ A + FD + + + WN ++ Y NG A +++ + E +V N +K
Sbjct: 33 INEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYIKN 92
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEA 142
IEE R + E + E +V A++ Y + VV A +F ++ ER+ E
Sbjct: 93 ----RMIEEARNVFEIMP----ERNVVSWTAMVKGYVQEGMVVEAELLFWRMPERN--EV 142
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
+ + D + R+L+ +V T ++ + G V AR +F+++
Sbjct: 143 SWTVMFGGLIDGGRIDDARKLYDMMPGK----DVVASTNMIGGLCREGRVDEAREIFDEM 198
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRM 262
RE+ V++W MITGY + A LFE M ++ + +++ +L + G ++
Sbjct: 199 RERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTE---VSWTSMLLGYTLSGRIEDAEE 255
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
FFE M + P + M+ LG G + +A + QM + D W ++ + +
Sbjct: 256 FFEVM----PMKPVIA-CNAMIVALGEVGEIVKARRVFDQMEDR-DNATWRGMIKAYERK 309
Query: 323 G 323
G
Sbjct: 310 G 310
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 166/398 (41%), Gaps = 52/398 (13%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
+V Y A A Q+FD +P+RN+ WN L+ Y N E A ++ + E +V
Sbjct: 54 IVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVV-- 111
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVI------RNKWETDVFVGAALIDMYAKCSCVVN 126
++ +K ++EG + +++ RN+ V G LID + +
Sbjct: 112 --SWTAMVKG-----YVQEGMVVEAELLFWRMPERNEVSWTVMFGG-LID----GGRIDD 159
Query: 127 ARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
AR+++D + +D +T +I + + RE+ + E NV T ++ Y
Sbjct: 160 ARKLYDMMPGKDVVAST--NMIGGLCREGRVDEAREI----FDEMRERNVITWTTMITGY 213
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVG 246
+ V VAR LFE + EK VSW +M+ GY + G A + FE M ++P I
Sbjct: 214 GQNKRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMP--MKP-VIACNA 270
Query: 247 VLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR-- 304
++ A G + R F+ M D + M+ G EA +L QM+
Sbjct: 271 MIVALGEVGEIVKARRVFDQME-----DRDNATWRGMIKAYERKGFELEALELFAQMQRQ 325
Query: 305 -VKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYV--ILSNIYARAANWEG 361
V+P ++L+ C ++ L+ + D YV +L +Y + G
Sbjct: 326 GVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ-FDGDVYVASVLMTMYVKC----G 380
Query: 362 VAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASH 399
KL+ DR K I W ++ +SG ASH
Sbjct: 381 ELVKAKLVFDRFPSKDIIM-W-------NSIISGYASH 410
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 139/335 (41%), Gaps = 32/335 (9%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T +V Y + A LF R+P+RN W V+ G + A +LY ++
Sbjct: 114 TAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLY------DMM 167
Query: 71 P--DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
P D + ++E R I +++ E +V +I Y + V AR
Sbjct: 168 PGKDVVASTNMIGGLCREGRVDEAREIFDEM----RERNVITWTTMITGYGQNKRVDVAR 223
Query: 129 QVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL----NVKVKTALVD 184
++F+ + E+ +E + +++ + E FE+ V A++
Sbjct: 224 KLFEVMPEK--TEVSWTSMLLGYTLSGRIEDAEEF--------FEVMPMKPVIACNAMIV 273
Query: 185 MYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHIT 243
+ G + AR +F+Q+ ++ +W MI Y G +AL+LF +M+ + V+P +
Sbjct: 274 ALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPS 333
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
+ +LS C+ GR +VR D V + ++ + G L +A L+
Sbjct: 334 LISILSVCATLASLQYGRQVHAHLVR-CQFDGDVYVASVLMTMYVKCGELVKA-KLVFDR 391
Query: 304 RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
D +W ++++ HG L E AL+ E+
Sbjct: 392 FPSKDIIMWNSIISGYASHG---LGEEALKVFHEM 423
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A+ L+ +Y C L A +FDR P +++ +WN +I YA +G E A+++++ + G
Sbjct: 368 VASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSG 427
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDV 99
+P+ T L ACS +EEG I E +
Sbjct: 428 TMPNKVTLIAILTACSYGGKLEEGLEIFESM 458
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHI 242
+ ++ G + AR F+ LR K + SWN++++GY +G +A +F++M + + +
Sbjct: 24 ISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPER---NIV 80
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
++ G++S + + +E R FE M + +V +T MV G + EA L +
Sbjct: 81 SWNGLVSGYIKNRMIEEARNVFEIMP-----ERNVVSWTAMVKGYVQEGMVVEAELLFWR 135
Query: 303 MRVKPDPG---VWGALLNSCKLHGHVKLAEL 330
M + + ++G L++ ++ KL ++
Sbjct: 136 MPERNEVSWTVMFGGLIDGGRIDDARKLYDM 166
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/523 (36%), Positives = 300/523 (57%), Gaps = 36/523 (6%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
+ + F ++ + +N +IRA + + + + LY + G+ D + FA+K+C
Sbjct: 57 SQRFFGQLSHPLVSHYNTMIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFAVKSCIR 116
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
+ G ++H ++ ++ + D + A++D+Y+ C +A +VFD++ RD
Sbjct: 117 FLYLPGGVQVHCNIFKDGHQWDTLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVAWNVM 176
Query: 139 ----------------------------PSEATLVTVISASADIAALPQGRELHGFSWRH 170
P + T + ++ A A + AL G +HG+
Sbjct: 177 ISCCIRNNRTRDALSLFDVMQGSSYKCEPDDVTCLLLLQACAHLNALEFGERIHGYIMER 236
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
+ + + +L+ MY++CG + A +F+ + K VVSW+AMI+G AM+G+ +A++ F
Sbjct: 237 GYRDALNLCNSLISMYSRCGCLDKAYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAF 296
Query: 231 EKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGH 289
E+M + V PD TF GVLSACS G+ DEG FF M R++ + P+V HY CMVDLLG
Sbjct: 297 EEMLRIGVLPDDQTFTGVLSACSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGR 356
Query: 290 SGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVIL 349
+G LD+A LIM M VKPD +W LL +C++HGHV L E + LIEL+ +AG+YV+L
Sbjct: 357 AGLLDKAYQLIMSMVVKPDSTMWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGDYVLL 416
Query: 350 SNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKL 409
NIY+ A +WE VA++RKLM ++ I+ + CS IE+K H F+ D SH EIY L
Sbjct: 417 LNIYSSAGHWEKVAEVRKLMKNKSIQTTPGCSTIELKGAVHEFVVDDVSHSRNREIYETL 476
Query: 410 KWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNL 469
+ +++ AGYV S H +++ EK ++ HSE+LA+AFG++ TP GT L + NL
Sbjct: 477 DEINHQLRIAGYVVELSSELHKMDDKEKGYVLSHHSEKLAVAFGVLATPPGTILRVASNL 536
Query: 470 KICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
++C DCH +K S + R++ +RD NR+HHF+ G CSC DYW
Sbjct: 537 RVCVDCHNFLKLFSGVYNRDVVLRDHNRFHHFRGGRCSCSDYW 579
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+ +YS C CL A+++F + +N+ W+ +I A NG AIE + +L IG
Sbjct: 244 LCNSLISMYSRCGCLDKAYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFEEMLRIG 303
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWET-DVFVGAALIDMYAKCSCVVNA 127
++PD+ TF L ACS ++EG + R T +V ++D+ + + A
Sbjct: 304 VLPDDQTFTGVLSACSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGLLDKA 363
Query: 128 RQVFDKILERDPSEATLVTVISA 150
Q+ ++ + P T++ A
Sbjct: 364 YQLIMSMVVK-PDSTMWRTLLGA 385
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/569 (37%), Positives = 308/569 (54%), Gaps = 72/569 (12%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T +V Y+ L +A + FD +P+R++ WN + AYA + A+ L++++LE G+
Sbjct: 196 TSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGIT 255
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK---------- 120
PD+ T+ + +CS++ I + + + FV AL+DM+AK
Sbjct: 256 PDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNI 315
Query: 121 ----------------------CSCVVNARQVFDKILERD-------------------- 138
+ AR++FD + +RD
Sbjct: 316 FDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMS 375
Query: 139 --------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVD 184
P E T+ +V+SA I AL + +L + +L+
Sbjct: 376 IELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIF 435
Query: 185 MYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHIT 243
MY+KCG V A +F+ + + VVS+N +I+G+A +GH +A+ L M++E ++PDH+T
Sbjct: 436 MYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVT 495
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
++GVL+ACS GL +EG+ F+S+ P+V HY CMVDLLG +G LDEA LI M
Sbjct: 496 YIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSM 550
Query: 304 RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVA 363
+KP GV+G+LLN+ ++H V L ELA KL ELEP + GNYV+LSNIYA WE V
Sbjct: 551 PMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVK 610
Query: 364 KLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVP 423
++R++M G+KKS+ SW+E K + H F GD SH +IY L LE +MK G+V
Sbjct: 611 RVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVA 670
Query: 424 GTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFIS 483
DVE +EK M+ HSE+LAI F L+ + GT + + KNL+IC DCH AIK IS
Sbjct: 671 DKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMIS 730
Query: 484 KITEREITVRDVNRYHHFKDGICSCGDYW 512
K+ REI VRD NR+H F +G+CSC DYW
Sbjct: 731 KLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 157/352 (44%), Gaps = 46/352 (13%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
++ +Y+ + A LF+++ +R L WN +I +G A+ L+ + ++
Sbjct: 136 ILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPARNII-- 193
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
T+ + + + +E RR +++ E V A+ YA+ C A +F
Sbjct: 194 --TWTSMVTGYAKMGDLESARRYFDEMP----ERSVVSWNAMQSAYAQKECPKEALNLFH 247
Query: 133 KILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCG 190
++LE P + T V IS+ + I + + LN VKTAL+DM+AK G
Sbjct: 248 QMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFG 307
Query: 191 LVKVARNLFEQLREKR--------------------------------VVSWNAMITGYA 218
+++ARN+F++L +R VVSWN+MI GYA
Sbjct: 308 NLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYA 367
Query: 219 MHGHSTKALDLFEKMKD--EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPS 276
+G S +++LF++M ++QPD +T VLSAC G + +VR+ +I
Sbjct: 368 QNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLD-IVREKNIKLG 426
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ + ++ + G + +A + M + D + L++ +GH K A
Sbjct: 427 ISGFNSLIFMYSKCGSVADAHRIFQTMGTR-DVVSFNTLISGFAANGHGKEA 477
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 145/313 (46%), Gaps = 35/313 (11%)
Query: 28 QLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALS 87
+F P + +++ +++ Y+ G + + L+ + L P F + + +K
Sbjct: 55 SIFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKL----- 109
Query: 88 AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTV 147
A + G H V++ D F+ A++DMYAK V AR +F+++ ER ++ ++
Sbjct: 110 AGKSGNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWN--SM 167
Query: 148 ISASADIAALPQGRELHGFSWRHRFEL-NVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
IS G E + N+ T++V YAK G ++ AR F+++ E+
Sbjct: 168 ISG-----CWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERS 222
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGG---------- 255
VVSWNAM + YA +AL+LF +M +E + PD T+V +S+CS G
Sbjct: 223 VVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILR 282
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
+ D+ + S V+ T ++D+ G L+ A ++ ++ + + W +
Sbjct: 283 MIDQKHIVLNSFVK-----------TALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIM 331
Query: 316 LNSCKLHGHVKLA 328
+++ G + LA
Sbjct: 332 ISAYTRVGKLSLA 344
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEV 237
++ A++DMYAK G V +ARNLFEQ+ E+ + WN+MI+G G+ T+A+ LF M
Sbjct: 132 IRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPAR- 190
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
+ IT+ +++ ++ G + R +F+ M + SV + M EA
Sbjct: 191 --NIITWTSMVTGYAKMGDLESARRYFDEMP-----ERSVVSWNAMQSAYAQKECPKEAL 243
Query: 298 DLIMQM---RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYA 354
+L QM + PD W ++SC G LA+ L ++I+ + H I+ N +
Sbjct: 244 NLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSIL-RMID-QKH------IVLNSFV 295
Query: 355 RAANWEGVAKLRKLMIDRGI 374
+ A + AK L I R I
Sbjct: 296 KTALLDMHAKFGNLEIARNI 315
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/501 (38%), Positives = 286/501 (57%), Gaps = 34/501 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ LY+ C C+ A +FD IP R + WN ++ AY N YE + ++ ++ + D
Sbjct: 485 LLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKAD 544
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
T+ + C S IEE I K +T F
Sbjct: 545 EITWSVVIGGCVKNSRIEEAMEIFR-----KMQTMGF----------------------- 576
Query: 133 KILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLV 192
P E T+ +++ A + L G+E+H + +RH + ++ ALVDMYAKCG +
Sbjct: 577 -----KPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGL 631
Query: 193 KVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSAC 251
++RN+F+ + K V SWN MI MHG+ +AL LFEKM V+PD TF VLSAC
Sbjct: 632 SLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSAC 691
Query: 252 SRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV 311
S L +EG F SM RD+ ++P +HYTC+VD+ +G L+EA I +M ++P
Sbjct: 692 SHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIA 751
Query: 312 WGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMID 371
W A L C+++ +V+LA+++ +KL E++P+ + NYV L NI A W +K+RKLM +
Sbjct: 752 WKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKE 811
Query: 372 RGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHD 431
RGI K+ CSW V N+ H F++GD S+ D+IY L L ++K AGY P T+ V HD
Sbjct: 812 RGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAKIKAAGYKPDTDYVLHD 871
Query: 432 VENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREIT 491
++ +EKA +C HSE+LA+AFG++N + + + KNL+IC DCH AIK++S + I
Sbjct: 872 IDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSNVVGVTIV 931
Query: 492 VRDVNRYHHFKDGICSCGDYW 512
VRD R+HHFK+G CSC D+W
Sbjct: 932 VRDSLRFHHFKNGNCSCKDFW 952
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 143/293 (48%), Gaps = 34/293 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++ LV+LY +C C+ A +FD +P RN+ WN L Y G + + ++ + G
Sbjct: 279 VSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNG 338
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD L ACS L ++ G+ IH +++ DVFV AL+++YA C CV A+
Sbjct: 339 VKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQ 398
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
VFD + R+ P T+++++ A +D+
Sbjct: 399 TVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQ 458
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L G+ +HGF+ RH +V V AL+ +YAKC V+ A+ +F+ + + V SWN ++T
Sbjct: 459 DLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILT 518
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
Y + K L +F +M +DEV+ D IT+ V+ C + +E F M
Sbjct: 519 AYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKM 571
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 134/279 (48%), Gaps = 34/279 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ +H Y C C+ A ++FD + R++ WN L Y G + + ++ ++
Sbjct: 77 IGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNK 136
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ + T L CS L ++ G+ IH V+R+ DVFV +A ++ YAKC CV A+
Sbjct: 137 VKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQ 196
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
VFD + RD P T+ ++SA +D+
Sbjct: 197 TVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQ 256
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L G+ +HGF+ +H NV V ALV++Y C V+ A+ +F+ + + V++WN++ +
Sbjct: 257 DLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLAS 316
Query: 216 GYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSR 253
Y G K L++F +M + V+PD + +L ACS+
Sbjct: 317 CYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQ 355
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 114/230 (49%), Gaps = 34/230 (14%)
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
AI++Y G+ PD F KAC+A + ++ H+D R +DV +G A I
Sbjct: 24 AIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIH 83
Query: 117 MYAKCSCVVNARQVFDKILERD----------------PSEA-----------------T 143
Y KC CV AR+VFD ++ RD P + T
Sbjct: 84 AYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLT 143
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
+ +++ +D+ L G+E+HGF RH +V V +A V+ YAKC V+ A+ +F+ +
Sbjct: 144 VSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMP 203
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACS 252
+ VV+WN++ + Y G K L++F +M D V+PD +T +LSACS
Sbjct: 204 HRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACS 253
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 88/215 (40%), Gaps = 34/215 (15%)
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P + + V A A + ++ H + R +V + A + Y KC V+ AR +
Sbjct: 38 PDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRV 97
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACS----- 252
F+ L + VV+WN++ Y G + L++F KM ++V+ + +T +L CS
Sbjct: 98 FDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDL 157
Query: 253 RGGLFDEGRMFFESMVRDYHIDPS----------VQHYTCMVDLLGH------------- 289
+ G G + MV D + + V+ + DL+ H
Sbjct: 158 KSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCY 217
Query: 290 --SGRLDEACDLIMQM---RVKPDPGVWGALLNSC 319
G + ++ +M VKPDP +L++C
Sbjct: 218 VNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSAC 252
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/558 (35%), Positives = 315/558 (56%), Gaps = 66/558 (11%)
Query: 21 DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFAL 80
+ L A+ +F +I NLF++N+LIR ++ A Y ++L+ + PDN TFPF +
Sbjct: 65 NLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLI 124
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA--------------------- 119
KA S + + G + H ++R ++ DV+V +L+ MYA
Sbjct: 125 KASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVV 184
Query: 120 ----------KCSCVVNARQVFDKILERD------------------------------- 138
KC V NAR++FD++ R+
Sbjct: 185 SWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREG 244
Query: 139 --PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVAR 196
+E +V+VIS+ A + AL G + + + +N+ + TALVDM+ +CG ++ A
Sbjct: 245 VVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAI 304
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGG 255
++FE L E +SW+++I G A+HGH+ KA+ F +M P +TF VLSACS GG
Sbjct: 305 HVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGG 364
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
L ++G +E+M +D+ I+P ++HY C+VD+LG +G+L EA + I++M VKP+ + GAL
Sbjct: 365 LVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGAL 424
Query: 316 LNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIK 375
L +CK++ + ++AE LI+++P +G YV+LSNIYA A W+ + LR +M ++ +K
Sbjct: 425 LGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVK 484
Query: 376 KSIACSWIEVKNKAHAFLSG-DASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVEN 434
K S IE+ K + F G D HP +I K + + G+++ GY T F DV+
Sbjct: 485 KPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDE 544
Query: 435 DEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRD 494
+EK + I HSE+LAIA+G++ T GT + I KNL++C+DCH K IS++ RE+ VRD
Sbjct: 545 EEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRD 604
Query: 495 VNRYHHFKDGICSCGDYW 512
NR+HHF++G+CSC DYW
Sbjct: 605 RNRFHHFRNGVCSCRDYW 622
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 92/226 (40%), Gaps = 25/226 (11%)
Query: 163 LHGFSWRHRFELNVKVKTALVDM-------YAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+HGF R +V V + L+ + L+ A +F Q++ + +N +I
Sbjct: 31 IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIR 90
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR----- 269
++ +KA + +M K + PD+ITF ++ A S G +VR
Sbjct: 91 CFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQN 150
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNS-CKLHGHVKLA 328
D +++ S+ H + +GR + QM + D W +++ CK +
Sbjct: 151 DVYVENSLVHMYANCGFIAAAGR------IFGQMGFR-DVVSWTSMVAGYCK----CGMV 199
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
E A E E+ + + I+ N YA+ +E L + M G+
Sbjct: 200 ENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGV 245
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/569 (37%), Positives = 308/569 (54%), Gaps = 72/569 (12%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T +V Y+ L +A + FD +P+R++ WN + AYA + A+ L++++LE G+
Sbjct: 196 TSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGIT 255
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK---------- 120
PD+ T+ + +CS++ I + + + FV AL+DM+AK
Sbjct: 256 PDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNI 315
Query: 121 ----------------------CSCVVNARQVFDKILERD-------------------- 138
+ AR++FD + +RD
Sbjct: 316 FDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMS 375
Query: 139 --------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVD 184
P E T+ +V+SA I AL + +L + +L+
Sbjct: 376 IELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIF 435
Query: 185 MYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHIT 243
MY+KCG V A +F+ + + VVS+N +I+G+A +GH +A+ L M++E ++PDH+T
Sbjct: 436 MYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVT 495
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
++GVL+ACS GL +EG+ F+S+ P+V HY CMVDLLG +G LDEA LI M
Sbjct: 496 YIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSM 550
Query: 304 RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVA 363
+KP GV+G+LLN+ ++H V L ELA KL ELEP + GNYV+LSNIYA WE V
Sbjct: 551 PMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVK 610
Query: 364 KLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVP 423
++R++M G+KKS+ SW+E K + H F GD SH +IY L LE +MK G+V
Sbjct: 611 RVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKRVGFVA 670
Query: 424 GTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFIS 483
DVE +EK M+ HSE+LAI F L+ + GT + + KNL+IC DCH AIK IS
Sbjct: 671 DKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTAIKMIS 730
Query: 484 KITEREITVRDVNRYHHFKDGICSCGDYW 512
K+ REI VRD NR+H F +G+CSC DYW
Sbjct: 731 KLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 151/339 (44%), Gaps = 46/339 (13%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A LF+++ +R L WN +I +G A+ L+ + ++ T+ + +
Sbjct: 149 ARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPARNII----TWTSMVTGYAK 204
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER--DPSEAT 143
+ +E RR +++ E V A+ YA+ C A +F ++LE P + T
Sbjct: 205 MGDLESARRYFDEMP----ERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTT 260
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
V IS+ + I + + LN VKTAL+DM+AK G +++ARN+F++L
Sbjct: 261 WVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELG 320
Query: 204 EKR--------------------------------VVSWNAMITGYAMHGHSTKALDLFE 231
+R VVSWN+MI GYA +G S +++LF+
Sbjct: 321 SQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFK 380
Query: 232 KMKD--EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGH 289
+M ++QPD +T VLSAC G + +VR+ +I + + ++ +
Sbjct: 381 EMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLD-IVREKNIKLGISGFNSLIFMYSK 439
Query: 290 SGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
G + +A + M + D + L++ +GH K A
Sbjct: 440 CGSVADAHRIFQTMGTR-DVVSFNTLISGFAANGHGKEA 477
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 145/306 (47%), Gaps = 21/306 (6%)
Query: 28 QLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALS 87
+F P + +++ +++ Y+ G + + L+ + L P F + + +K
Sbjct: 55 SIFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKL----- 109
Query: 88 AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTV 147
A + G H V++ D F+ A++DMYAK V AR +F+++ ER ++ ++
Sbjct: 110 AGKSGNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWN--SM 167
Query: 148 ISASADIAALPQGRELHGFSWRHRFEL-NVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
IS G E + N+ T++V YAK G ++ AR F+++ E+
Sbjct: 168 ISG-----CWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERS 222
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGG---LFDEGRM 262
VVSWNAM + YA +AL+LF +M +E + PD T+V +S+CS G L D
Sbjct: 223 VVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADS--- 279
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
M+ HI + T ++D+ G L+ A ++ ++ + + W ++++
Sbjct: 280 -ILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRV 338
Query: 323 GHVKLA 328
G + LA
Sbjct: 339 GKLSLA 344
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEV 237
++ A++DMYAK G V +ARNLFEQ+ E+ + WN+MI+G G+ T+A+ LF M
Sbjct: 132 IRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPAR- 190
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
+ IT+ +++ ++ G + R +F+ M + SV + M EA
Sbjct: 191 --NIITWTSMVTGYAKMGDLESARRYFDEMP-----ERSVVSWNAMQSAYAQKECPKEAL 243
Query: 298 DLIMQM---RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYA 354
+L QM + PD W ++SC G LA+ L ++I+ + H I+ N +
Sbjct: 244 NLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSIL-RMID-QKH------IVLNSFV 295
Query: 355 RAANWEGVAKLRKLMIDRGI 374
+ A + AK L I R I
Sbjct: 296 KTALLDMHAKFGNLEIARNI 315
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/530 (37%), Positives = 304/530 (57%), Gaps = 39/530 (7%)
Query: 18 SACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFP 77
SA L A +FD I + F +N +IRA+A + ++ L+ ++ G+ PD+FTFP
Sbjct: 33 SAPASLSYARSIFDLIAFPDTFAFNTIIRAHA-DSSPSFSLSLFSKMAMAGVSPDHFTFP 91
Query: 78 FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER 137
F LKAC+ L + G +H + + +++DV+V LI Y C + A +VF+++ ER
Sbjct: 92 FVLKACARL---QTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKVFEEMPER 148
Query: 138 D----------------------------------PSEATLVTVISASADIAALPQGREL 163
D P E +++V+SA + + L G+ +
Sbjct: 149 DLVSWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWI 208
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
GF R+ E V + TALVDM+++CG ++ + +F+++ E+ V++W A+I G A+HG S
Sbjct: 209 RGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRS 268
Query: 224 TKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTC 282
+AL +F +M++ QPDH+TF GVL ACS GGL EG FES+ +Y ++P +HY C
Sbjct: 269 AEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGC 328
Query: 283 MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHD 342
MVDLLG +G L+EAC + M ++P+ +W LL +C H +++LAE EK+ EL+ +
Sbjct: 329 MVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINELDSYH 388
Query: 343 AGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNC 402
G+YV+LSN+Y W A +R M ++ I K CS I V + H F++GD +HP
Sbjct: 389 DGDYVLLSNVYGGVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDNNHPQF 448
Query: 403 DEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTR 462
+ I L + +K GY P +V D+E +EK + + HSE+LA+AF L+ D
Sbjct: 449 ESIREFLVSMIDSLKVVGYTPDISNVLFDIEEEEKESTLGYHSEKLAVAFALLCFKDSRT 508
Query: 463 LLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ + KNL+IC DCH +K+ S + EREI +RD NR+HHF G CSC DYW
Sbjct: 509 IRVMKNLRICHDCHCFMKYASDVFEREIIIRDRNRFHHFSKGSCSCRDYW 558
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G F L T LV ++S C C+ + ++FD + +RN+ W LI A +G A+ ++
Sbjct: 216 GLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMF 275
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW 104
Y + G PD+ TF L ACS + EG + E IRN++
Sbjct: 276 YEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFES-IRNEY 317
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/581 (34%), Positives = 313/581 (53%), Gaps = 81/581 (13%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL-------- 64
LV +Y+ C + A+ +F + +++ WN ++ Y+ G +E A+ L+ ++
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
Query: 65 ---------------------------LEIGLVPDNFTFPFALKACSALSAIEEGRRIH- 96
L G+ P+ T L C+++ A+ G+ IH
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Query: 97 ------EDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL--ERD---------- 138
D+ +N + V LIDMYAKC V AR +FD + ERD
Sbjct: 390 YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGG 449
Query: 139 -------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFE 173
P+ T+ + A A +AAL G+++H ++ R++
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN 509
Query: 174 -LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
+ + V L+DMYAKCG + AR +F+ + K V+W +++TGY MHG+ +AL +F++
Sbjct: 510 AVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE 569
Query: 233 MKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
M+ + D +T + VL ACS G+ D+G +F M + + P +HY C+VDLLG +G
Sbjct: 570 MRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAG 629
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSN 351
RL+ A LI +M ++P P VW A L+ C++HG V+L E A EK+ EL + G+Y +LSN
Sbjct: 630 RLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSN 689
Query: 352 IYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKW 411
+YA A W+ V ++R LM +G+KK CSW+E F GD +HP+ EIY L
Sbjct: 690 LYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLD 749
Query: 412 LEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKI 471
R+K+ GYVP T HDV+++EK +++ HSE+LA+A+G++ TP G + ITKNL++
Sbjct: 750 HMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRV 809
Query: 472 CDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
C DCH A ++S+I + +I +RD +R+HHFK+G CSC YW
Sbjct: 810 CGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 142/285 (49%), Gaps = 37/285 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRN--LFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
L + L+ Y + CL +A L R P + ++ WN LIR+Y NG + L+ +
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
+ PDN+TFPF KAC +S++ G H + + ++VFVG AL+ MY++C + +
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 127 ARQVFDKILERD----------------------------------PSEATLVTVISASA 152
AR+VFD++ D P TLV V+ A
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+ G++LH F+ N+ V LVDMYAKCG++ A +F + K VVSWNA
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 213 MITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGL 256
M+ GY+ G A+ LFEKM++E ++ D +T+ +S ++ GL
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL 345
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 164/355 (46%), Gaps = 55/355 (15%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + LV +YS C L +A ++FD + ++ WN +I +YA G +VA+E++
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 62 YRLL-EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
R+ E G PDN T L C++L G+++H + ++ ++FVG L+DMYAK
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
C + A VF + +D V+S +A +A G+S RFE V+
Sbjct: 277 CGMMDEANTVFSNMSVKD--------VVSWNAMVA---------GYSQIGRFEDAVR--- 316
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKR----VVSWNAMITGYAMHGHSTKALDLFEKM-KD 235
LFE+++E++ VV+W+A I+GYA G +AL + +M
Sbjct: 317 -----------------LFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS 359
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHY-------TCMVDLLG 288
++P+ +T + VLS C+ G G+ ++ Y ID + ++D+
Sbjct: 360 GIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK-YPIDLRKNGHGDENMVINQLIDMYA 418
Query: 289 HSGRLDEACDLIMQMRVKP-DPGVWGALLNSCKLHGHVKLAELALEKLIELEPHD 342
++D A + + K D W ++ HG A ALE L E+ D
Sbjct: 419 KCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD---ANKALELLSEMFEED 470
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 148/326 (45%), Gaps = 27/326 (8%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEVAIE 59
G G ++ +L+ +Y+ C + A +FD + +R++ W V+I Y+ +G A+E
Sbjct: 402 GHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALE 461
Query: 60 LYYRLLE--IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWE-TDVFVGAALID 116
L + E P+ FT AL AC++L+A+ G++IH +RN+ +FV LID
Sbjct: 462 LLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLID 521
Query: 117 MYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHG-FSWRHRFELN 175
MYAKC + +AR VFD ++ ++ VT S G E G F R
Sbjct: 522 MYAKCGSISDARLVFDNMMAKNE-----VTWTSLMTGYGMHGYGEEALGIFDEMRRIGFK 576
Query: 176 VKVKTALVDMYA--KCGLVKVARNLFEQLREKRVVS-----WNAMITGYAMHGHSTKALD 228
+ T LV +YA G++ F +++ VS + ++ G AL
Sbjct: 577 LDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALR 636
Query: 229 LFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-DYHIDPSVQHYTCMVDLL 287
L E+M ++P + +V LS C G + G E + + D S YT + +L
Sbjct: 637 LIEEMP--MEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGS---YTLLSNLY 691
Query: 288 GHSGRLDEACDLIMQMR---VKPDPG 310
++GR + + MR VK PG
Sbjct: 692 ANAGRWKDVTRIRSLMRHKGVKKRPG 717
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 123/274 (44%), Gaps = 19/274 (6%)
Query: 113 ALIDMYAKCSCVVNARQVFDKI--LERDPSEATLVTVISASADIAALPQGRELHGFSWRH 170
+LI Y C +F + L P T V A +I+++ G H S
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT 156
Query: 171 RFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF 230
F NV V ALV MY++C + AR +F+++ VVSWN++I YA G AL++F
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 231 EKMKDEV--QPDHITFVGVLSACSRGGLFDEGRMFF-----ESMVRDYHIDPSVQHYTCM 283
+M +E +PD+IT V VL C+ G G+ M+++ + C+
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG------NCL 270
Query: 284 VDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE-PHD 342
VD+ G +DEA + M VK D W A++ G + A EK+ E + D
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVK-DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
Query: 343 AGNYVILSNIYA-RAANWEGVAKLRKLMIDRGIK 375
+ + YA R +E + R+ M+ GIK
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQ-MLSSGIK 362
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/531 (35%), Positives = 303/531 (57%), Gaps = 35/531 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
V+ L+++Y+ C L A ++F+++PQR+ W LI Y+ + A+ + ++L
Sbjct: 96 VMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRF 155
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G P+ FT +KA +A G ++H ++ ++++V VG+AL+D+Y + + +A
Sbjct: 156 GYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDA 215
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
+ VFD + R+ PS + ++ A +
Sbjct: 216 QLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSST 275
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L QG+ +H + + +L L+DMYAK G + AR +F++L ++ VVSWN+++
Sbjct: 276 GFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLL 335
Query: 215 TGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
T YA HG +A+ FE+M+ ++P+ I+F+ VL+ACS GL DEG ++E M +D I
Sbjct: 336 TAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GI 394
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P HY +VDLLG +G L+ A I +M ++P +W ALLN+C++H + +L A E
Sbjct: 395 VPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAE 454
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
+ EL+P D G +VIL NIYA W A++RK M + G+KK ACSW+E++N H F+
Sbjct: 455 HVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFV 514
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
+ D HP +EI K + + ++KE GYVP T V V+ E+ + HSE++A+AF
Sbjct: 515 ANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFA 574
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
L+NTP G+ + I KN+++C DCH AIK SK+ REI VRD NR+HHFKD
Sbjct: 575 LLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 160/323 (49%), Gaps = 39/323 (12%)
Query: 65 LEIGLVP-DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
LE +P D + LK C+ + +GR +H ++++ + D+ +G L++MYAKC
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 124 VVNARQVFDKILERD---------------------------------PSEATLVTVISA 150
+ AR+VF+K+ +RD P+E TL +VI A
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
+A G +LHGF + F+ NV V +AL+D+Y + GL+ A+ +F+ L + VSW
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 211 NAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
NA+I G+A + KAL+LF+ M +D +P H ++ + ACS G ++G+ M++
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+ T ++D+ SG + +A + ++ K D W +LL + HG K A
Sbjct: 291 SGEKLVAFAGNT-LLDMYAKSGSIHDARKIFDRL-AKRDVVSWNSLLTAYAQHGFGKEAV 348
Query: 330 LALEKL--IELEPHDAGNYVILS 350
E++ + + P++ +L+
Sbjct: 349 WWFEEMRRVGIRPNEISFLSVLT 371
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/516 (37%), Positives = 298/516 (57%), Gaps = 43/516 (8%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G+ L++ Y+ AH LFDRIP+ + WN +I+ Y G ++A+ L
Sbjct: 144 LGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTL 203
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ E + W T +I Y +
Sbjct: 204 FRKMAEKNAIS--------------------------------WTT-------MISGYVQ 224
Query: 121 CSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
A Q+F ++ D P +L +SA A + AL QG+ +H + + R ++ +
Sbjct: 225 ADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVL 284
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEV 237
L+DMYAKCG ++ A +F+ +++K V +W A+I+GYA HGH +A+ F +M K +
Sbjct: 285 GCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGI 344
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
+P+ ITF VL+ACS GL +EG++ F SM RDY++ P+++HY C+VDLLG +G LDEA
Sbjct: 345 KPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAK 404
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAA 357
I +M +KP+ +WGALL +C++H +++L E E LI ++P+ G YV +NI+A
Sbjct: 405 RFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDK 464
Query: 358 NWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK 417
W+ A+ R+LM ++G+ K CS I ++ H FL+GD SHP ++I +K + + +++
Sbjct: 465 KWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLE 524
Query: 418 EAGYVPGTESVFHD-VENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCH 476
E GYVP E + D V++DE+ ++ HSE+LAI +GLI T GT + I KNL++C DCH
Sbjct: 525 ENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCH 584
Query: 477 IAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
K ISKI +R+I +RD R+HHF+DG CSCGDYW
Sbjct: 585 KVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 166/353 (47%), Gaps = 43/353 (12%)
Query: 18 SACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFP 77
++ D L A +FD + + FLWN++IR ++ + E ++ LY R+L + +TFP
Sbjct: 60 TSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFP 119
Query: 78 FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER 137
LKACS LSA EE +IH + + +E DV+ +LI+ YA A +FD+I E
Sbjct: 120 SLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEP 179
Query: 138 DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
D SW +++ Y K G + +A
Sbjct: 180 D--------------------------DVSW-----------NSVIKGYVKAGKMDIALT 202
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGL 256
LF ++ EK +SW MI+GY + +AL LF +M++ +V+PD+++ LSAC++ G
Sbjct: 203 LFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGA 262
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
++G+ + S + I ++D+ G ++EA ++ ++ K W AL+
Sbjct: 263 LEQGK-WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK-KKSVQAWTALI 320
Query: 317 NSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLM 369
+ HGH A+ K +E++ VI A ++ G+ + KL+
Sbjct: 321 SGYAYHGH---GREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 370
>gi|115469684|ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|53791823|dbj|BAD53889.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|53792844|dbj|BAD53877.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113596481|dbj|BAF20355.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|125598347|gb|EAZ38127.1| hypothetical protein OsJ_22476 [Oryza sativa Japonica Group]
Length = 648
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/516 (38%), Positives = 293/516 (56%), Gaps = 44/516 (8%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF H + L+ Y AC + A ++FD + ++++ W ++ AY +G A E++
Sbjct: 172 GFDRHRFVENSLIGAYVACGDVGAARKVFDEMVEKDVISWTSIVVAYTRSGDMRSAEEVF 231
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R C D+ A++ YA+
Sbjct: 232 GR-------------------CPV--------------------KDMVAWTAMVTGYAQN 252
Query: 122 SCVVNARQVFDKILERDP--SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
+ V A +VFD++ E E +L ISA A + AL + + + R F NV V
Sbjct: 253 AMPVKALEVFDRMAELGMVIDEVSLTGAISACAQLGALRRAAWVQEIAERTGFGNNVVVG 312
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM--KDEV 237
+ LVDMYAKCGL+ A +F ++EK V ++++MI G A HG +++A+ LF++M + V
Sbjct: 313 SGLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIAGLASHGRASEAIALFKEMVNRANV 372
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
+P+H+TF+GVL+ACS G+ EGR +F M Y I PS HY CMVDLLG +G +DEA
Sbjct: 373 EPNHVTFIGVLTACSHAGMVGEGRYYFAQMKDKYGIMPSADHYACMVDLLGRAGLVDEAL 432
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAA 357
DL+ M V P GVWGALL +C++HG ++A++ E L +LEP GNYV+LSNI A A
Sbjct: 433 DLVRSMSVTPHGGVWGALLGACRIHGKSEIAKVVAEHLFKLEPESIGNYVLLSNILASAG 492
Query: 358 NWEGVAKLRKLMIDRGIKKSIACSWIEVKNK-AHAFLSGDASHPNCDEIYAKLKWLEGRM 416
WE V+K+R LM + +KK A S E ++ H F +GD +HP EI L L ++
Sbjct: 493 KWEEVSKVRILMRKQRLKKDPAVSLFEGRDGLVHQFFAGDNAHPRTHEIKKALLELVAKL 552
Query: 417 KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCH 476
K GYVP S+ +DV ++EK ++ HSE+LA++FGL+ G + I KNL+ICDDCH
Sbjct: 553 KLEGYVPILSSIVYDVNDEEKERLLMGHSEKLALSFGLLTLGSGCTIRIIKNLRICDDCH 612
Query: 477 IAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ ++ +S++ EI VRD R+HHFK+G CSCG +W
Sbjct: 613 LFMQLVSRVESVEIIVRDNMRFHHFKNGECSCGGFW 648
>gi|294464140|gb|ADE77588.1| unknown [Picea sitchensis]
Length = 312
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/312 (56%), Positives = 225/312 (72%), Gaps = 1/312 (0%)
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEG 260
+ K VVSWNAMI GY MHGH AL LF +M+ V+P+ ITF+ VLSACS GL DEG
Sbjct: 1 MSNKNVVSWNAMIVGYGMHGHGEDALVLFTQMQQRGVKPNEITFISVLSACSHAGLVDEG 60
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
+ M DY I P+V+HY CMVDLLG +G L+EA D I +M ++P VWGA L SC+
Sbjct: 61 WKCYNCMTLDYAITPTVEHYACMVDLLGRAGHLNEAWDFIEKMPIEPGASVWGAFLGSCR 120
Query: 321 LHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIAC 380
+H +++L E E L+ L+P +AG YV+LSNIYA A W+ VAK+RK+M ++ +KKS C
Sbjct: 121 IHCNIELGERVAELLLNLDPDNAGYYVLLSNIYAAAGRWDDVAKVRKMMKEKDVKKSPGC 180
Query: 381 SWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANM 440
S IEV NK H+F+ GD SHP + IYA L+ L +M+ GYVP T+ V HDVE + K NM
Sbjct: 181 SLIEVNNKLHSFVVGDISHPQTEAIYAMLETLARQMEAVGYVPCTDFVLHDVEEEIKENM 240
Query: 441 ICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHH 500
+ HSE+LAIAFGLI+T GT + ITKNL++C DCH A KFISKI +REI +RD+NR+HH
Sbjct: 241 LFAHSEKLAIAFGLISTRSGTSIRITKNLRVCGDCHSATKFISKIVKREIIMRDLNRFHH 300
Query: 501 FKDGICSCGDYW 512
FKDG+CSCGDYW
Sbjct: 301 FKDGLCSCGDYW 312
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 33 IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
+ +N+ WN +I Y +G E A+ L+ ++ + G+ P+ TF L ACS ++EG
Sbjct: 1 MSNKNVVSWNAMIVGYGMHGHGEDALVLFTQMQQRGVKPNEITFISVLSACSHAGLVDEG 60
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/593 (36%), Positives = 323/593 (54%), Gaps = 88/593 (14%)
Query: 7 PVLATKLVHL--YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV---AIELY 61
P+ A +++ +S+ D + A +F ++P+ N F WN ++R A + A+ L+
Sbjct: 51 PLTAAEVIKFCAFSSRD-IDYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLF 109
Query: 62 YRLLEIGLV-PDNFTFPFALKACSALSAIEEGRRI---------HED--VIRN------- 102
+L G V P+ FTFP LKAC+ S + EG++I HED VI N
Sbjct: 110 SAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVM 169
Query: 103 -----------------------------KWETDVFVGAALIDMYAKCSCVVNARQVFDK 133
K + +V + +ID + + +A+ +FD+
Sbjct: 170 CAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDE 229
Query: 134 ILER---------------------------------DPSEATLVTVISASADIAALPQG 160
+ +R DP+ TLV+V+ A A I AL G
Sbjct: 230 MPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELG 289
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMH 220
+ +H ++ +++ E++ + +ALVDMY+KCG + A +FE L ++ ++W+A+I +AMH
Sbjct: 290 KWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMH 349
Query: 221 GHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQH 279
G + A+ F M K V P+ + ++G+LSACS GL +EGR FF MV+ + P ++H
Sbjct: 350 GRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEH 409
Query: 280 YTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
Y CMVDLLG +G L+EA +LI M ++PD +W ALL +CK+H ++K+ E E L+EL
Sbjct: 410 YGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELA 469
Query: 340 PHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASH 399
PHD+G+YV LSN+YA NWE VA++R M I+K CSWIE+ H FL D SH
Sbjct: 470 PHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSH 529
Query: 400 PNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPD 459
EI A L + +++ GY P T VF + + E+A + HSE++A+AFGLI+T
Sbjct: 530 SKAKEIQAMLGEMSMKLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAP 589
Query: 460 GTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L I KNL+IC+DCH ++K IS I +R+I VRD R+H F+ G CSC DYW
Sbjct: 590 QHPLKIVKNLRICEDCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 167/386 (43%), Gaps = 69/386 (17%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
++N ++ F+ PQ L L + P ++ +L+ ++ G + D T +K
Sbjct: 5 IYNPNRTFNFSPQPPLILSKPFT---SCKTPRDLK-QLHAIFIKTGQIQDPLTAAEVIKF 60
Query: 83 CSALSA-IEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS---CVVNARQVFDKIL--- 135
C+ S I+ R V R E + F ++ + A+ + A +F +L
Sbjct: 61 CAFSSRDIDYARA----VFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDG 116
Query: 136 ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC------ 189
P+ T +V+ A A + L +G+++HG + F + V + LV MY C
Sbjct: 117 RVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDA 176
Query: 190 -----------------------------------------GLVKVARNLFEQLREKRVV 208
G +K A+NLF+++ ++ VV
Sbjct: 177 YSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVV 236
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR-MFFES 266
SWN MI+GYA +GH +A++LF++M+ + P+++T V VL A +R G + G+ + +
Sbjct: 237 SWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYA 296
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
ID + + +VD+ G +DEA + + K + W A++ + +HG +
Sbjct: 297 GKNKIEIDDVLG--SALVDMYSKCGSIDEALQ-VFETLPKRNAITWSAIIGAFAMHGRAE 353
Query: 327 LAELALEKLIE--LEPHDAGNYVILS 350
A + + + + P+D ILS
Sbjct: 354 DAIIHFHLMGKAGVTPNDVAYIGILS 379
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/513 (39%), Positives = 291/513 (56%), Gaps = 68/513 (13%)
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G +P+ +TF F KAC + EG +I I+ E+++FV A+I MYA V A
Sbjct: 27 GFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEA 86
Query: 128 RQVF-------------------------------DKILERD------------------ 138
R+VF D++ ERD
Sbjct: 87 RRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFK 146
Query: 139 ---------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALV 183
P+E TL + ++A A++ AL QGR +H + + ++N ++ +L+
Sbjct: 147 EALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLL 206
Query: 184 DMYAKCGLVKVARNLF--EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPD 240
DMYAKCG + A +F E + +V WNAMI GYAMHG S +A+DLFE+MK ++V P+
Sbjct: 207 DMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPN 266
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
+TFV +L+ACS G L +EGR +F+SM Y I+P ++HY CMVDLLG SG L EA + +
Sbjct: 267 KVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETV 326
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
M + PD +WGALL +C++H ++ + + + EL+ G +V+L+N+Y+ + W+
Sbjct: 327 FNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWD 386
Query: 361 GVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAG 420
+R+ + G KK+ CS IE+ H FL GD SHP ++Y L + ++K AG
Sbjct: 387 EAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAG 446
Query: 421 YVPGTESVFHDVENDE-KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAI 479
YVP V D++++E K + HSE+LAIAFGLINTP GT + I KNL++C DCH A
Sbjct: 447 YVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEAT 506
Query: 480 KFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
KFISK+ +REI VRD RYHHFKDG CSC DYW
Sbjct: 507 KFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 539
>gi|225432322|ref|XP_002276230.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Vitis vinifera]
Length = 606
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/550 (37%), Positives = 313/550 (56%), Gaps = 39/550 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF L++ Y ++A QLF+ + + N+ + L+ + G + A+ ++
Sbjct: 57 GFLNDTFTTNHLINSYVRIRRTNDASQLFEEMREPNVISFTSLMAGFIKVGRPKSALLIF 116
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++LE ++P+ FTF + ACS L+ + G++IH V + ++ V ++LIDMY KC
Sbjct: 117 CKMLESWVLPNAFTFATVVNACSMLADLRTGQKIHSHVEMFGVQCNLVVCSSLIDMYGKC 176
Query: 122 SCVVNARQVFDKILERD----------------------------------PSEATLVTV 147
+ V +AR+VFD + R+ P+ L +V
Sbjct: 177 NNVDDARRVFDGMDYRNVVSWTSMITAYGQNALGECALQLFREFNGLPLSSPNHFMLASV 236
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
I+A A + L G+ H R E N V +ALVDMYAKCG + + +F ++ + V
Sbjct: 237 INACASLGRLVSGKVAHAAVIRRGHESNDVVASALVDMYAKCGCIGYSDKVFRRIPDPSV 296
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFES 266
+ + +MI G A +G +LD+F++M D ++P+ +TFVGVL ACS GL D+G + S
Sbjct: 297 IPYTSMIVGAAKYGLGKFSLDIFKEMLDRRIKPNDVTFVGVLHACSHSGLVDDGLEYLHS 356
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPG--VWGALLNSCKLHGH 324
M + + + P +HYTC+VD+LG +GRLDEA L ++V+PD G +WG LL++ +L+G
Sbjct: 357 MHKKHGVVPDTKHYTCVVDMLGRTGRLDEAHQLAKSIQVEPDQGALLWGTLLSASRLYGR 416
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
V +A A + LIE A YV +SN YA A WE V +R M G+ K CSW+E
Sbjct: 417 VDIAVEASKWLIESNQQVAAAYVTMSNTYAMAGKWENVHSIRYEMKHYGVYKEPGCSWVE 476
Query: 385 VKNKAHAFLSGDASH-PNCDEIYAKLKWLEGRMKEAGYVPGTESVFH-DVENDEKANMIC 442
+++ A+ F +GD S E+ + L+ LE RMKE GYV G+ + DVE + K ++
Sbjct: 477 IRDSAYVFYAGDVSLCARGSEVASLLRELERRMKERGYVGGSRGLVSIDVEEEAKEEIVG 536
Query: 443 CHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFK 502
HSERLA+AFGLI+ P G + + KNL++C DCH A K IS+I ER+ VRDVNR+HHF+
Sbjct: 537 LHSERLALAFGLISIPKGVTIRVMKNLRMCRDCHEAFKLISEIVERDFVVRDVNRFHHFE 596
Query: 503 DGICSCGDYW 512
+G C+C D+W
Sbjct: 597 NGSCTCRDFW 606
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/542 (38%), Positives = 299/542 (55%), Gaps = 36/542 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF L+ +Y++ + +A ++F R+ ++ W +I Y NG + A+E+Y
Sbjct: 328 GFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVY 387
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + PD+ T AL AC+ L ++ G ++HE + V V AL++MYAK
Sbjct: 388 ALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKS 447
Query: 122 SCVVNARQVFDKILERD--------------------------------PSEATLVTVIS 149
+ A +VF + E+D P+ T + +S
Sbjct: 448 KHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGHVKPNSVTFIAALS 507
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A A AL G+E+H + R V AL+D+Y KCG A F EK VVS
Sbjct: 508 ACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVS 567
Query: 210 WNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WN M++G+ HG AL LF +M + + PD +TFV +L ACSR G+ +G F M
Sbjct: 568 WNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMT 627
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ I P+++HY CMVDLL G+L EA +LI +M +KPD VWGALLN C++H HV+L
Sbjct: 628 EKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELG 687
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
ELA + ++ELEP+D +V+L ++Y A W VA++RK M ++G+++ CSW+EVK
Sbjct: 688 ELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGV 747
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
HAFL+ D SHP EI L + RMK G+ P ES+ D E E +++C HSERL
Sbjct: 748 THAFLTDDESHPQIKEINVVLHGIYERMKACGFAP-VESL-EDKEVSED-DILCGHSERL 804
Query: 449 AIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
A+AFGLINT GT + +TKN C CH+ K IS+I REITVRD + H FKDG CSC
Sbjct: 805 AVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAISEIVRREITVRDTKQLHCFKDGDCSC 864
Query: 509 GD 510
GD
Sbjct: 865 GD 866
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 162/326 (49%), Gaps = 36/326 (11%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+A ++F ++P+R++F WNV++ Y G E A++LYYR+L G+ PD +TFP L+ C
Sbjct: 149 HAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCG 208
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------ 138
+ GR +H V+R + +V V AL+ MYAKC +V AR+VFD + D
Sbjct: 209 GIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNA 268
Query: 139 ---------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHR 171
P+ T+ +V AS ++ + +E+HGF+ +
Sbjct: 269 MIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRG 328
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
F ++V +L+ MY G + A +F ++ K +SW AMI+GY +G KAL+++
Sbjct: 329 FAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYA 388
Query: 232 KMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
M+ V PD +T L+AC+ G D G E + ++ V ++++ S
Sbjct: 389 LMELHNVSPDDVTIASALAACACLGRLDVGIKLHE-LAQNKGFIRYVVVANALLEMYAKS 447
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALL 316
+D+A ++ M K D W +++
Sbjct: 448 KHIDKAIEVFKFMAEK-DVVSWSSMI 472
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 169/399 (42%), Gaps = 44/399 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + LV +Y+ C + A ++FD + + WN +I + N E +EL+
Sbjct: 227 GFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELF 286
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+LE + P+ T A LS + + +H ++ + DV +LI MY
Sbjct: 287 LTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSL 346
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +A ++F ++ +D P + T+ + +
Sbjct: 347 GRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASAL 406
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A A + L G +LH + F V V AL++MYAK + A +F+ + EK VV
Sbjct: 407 AACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVV 466
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
SW++MI G+ + S +AL F M V+P+ +TF+ LSAC+ G G+ ++
Sbjct: 467 SWSSMIAGFCFNHRSFEALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVL 526
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLHGHVK 326
R I ++DL G+ A Q V + V W +L+ HG
Sbjct: 527 R-CGIGSEGYVPNALLDLYVKCGQTSYAW---AQFSVHSEKDVVSWNIMLSGFVAHGLGD 582
Query: 327 LAELALEKLIELEPH-DAGNYVILSNIYARAA----NWE 360
+A +++E+ H D +V L +RA WE
Sbjct: 583 IALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWE 621
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
+++ A++ M + G + A +F ++ E+ V SWN M+ GY G +ALDL+ +M
Sbjct: 129 FGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRM 188
Query: 234 K-DEVQPDHITFVGVLSACSRGGLFD 258
++PD TF VL C GG+ D
Sbjct: 189 LWAGMRPDVYTFPCVLRTC--GGIPD 212
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/550 (38%), Positives = 307/550 (55%), Gaps = 50/550 (9%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQR----NLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+V YS +A LF++I + N+ W+ +I YA G A++++ ++ G
Sbjct: 303 MVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCG 362
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIR-------NKWETDVFVGAALIDMYAKC 121
P+ T L C+ + G+ H I+ N D+ V ALIDMY+KC
Sbjct: 363 SEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKC 422
Query: 122 SCVVNARQVFDKILERD-------------------------------------PSEATL 144
AR +FD I +D P+ T+
Sbjct: 423 KSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTI 482
Query: 145 VTVISASADIAALPQGRELHGFSWRHRFELNVK-VKTALVDMYAKCGLVKVARNLFEQLR 203
+ A A + AL GR++H + R+RFE + V L+DMY+K G V AR +F+ +
Sbjct: 483 SCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMH 542
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRM 262
++ VSW +++TGY MHG +AL +F +M K + PD +TFV VL ACS G+ D+G
Sbjct: 543 QRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGIN 602
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
+F M +D+ + P +HY CMVDLL +GRLDEA +LI M +KP P VW ALL++C+++
Sbjct: 603 YFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVY 662
Query: 323 GHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSW 382
+V+L E A +L+ELE + G+Y +LSNIYA A W+ VA++R LM + GIKK CSW
Sbjct: 663 ANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSW 722
Query: 383 IEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMIC 442
++ + F +GD SHP +IY L+ L R+K GYVP HDV+++EK +++
Sbjct: 723 VQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLS 782
Query: 443 CHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFK 502
HSE+LA+A+G++ T G + ITKNL+ C DCH A +IS I E EI VRD +R+HHFK
Sbjct: 783 EHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFK 842
Query: 503 DGICSCGDYW 512
+G CSC YW
Sbjct: 843 NGSCSCRGYW 852
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 186/381 (48%), Gaps = 69/381 (18%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRI--PQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
T ++ +Y + A + R+ +F WN LIR G E ++LY R+ +G
Sbjct: 62 THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLG 121
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
PD++TFPF LKAC + + G +H V + +E +VFVG L+ MY +C NAR
Sbjct: 122 WRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENAR 181
Query: 129 QVFDKILERD-------------------------------------PSEATLVTVISAS 151
QVFD++ ER P +LV V+ A
Sbjct: 182 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPAC 241
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
A + A +G+++HG++ R +V V A+VDMYAKCG+++ A +FE+++ K VVSWN
Sbjct: 242 ASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWN 301
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
AM+TGY+ G AL LFEK+++E ++ + +T+ V++ ++ GL E F M R
Sbjct: 302 AMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQM-RL 360
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
+P+V +V LL C L G LL+ + H H
Sbjct: 361 CGSEPNV---VTLVSLL-------SGCALA------------GTLLHGKETHCH------ 392
Query: 331 ALEKLIELEPHDAGNYVILSN 351
A++ ++ L+ +D G+ +++ N
Sbjct: 393 AIKWILNLDENDPGDDLMVIN 413
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 169/384 (44%), Gaps = 87/384 (22%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQR---NLFLWNVLIRAYAWNGPYEVAI 58
GF ++ + LV +Y C NA Q+FD + +R +L WN ++ AY G A+
Sbjct: 156 GFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAM 215
Query: 59 ELYYRLLE-IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDM 117
+++ R+ E +G+ PD + L AC+++ A G+++H +R+ DVFVG A++DM
Sbjct: 216 KMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDM 275
Query: 118 YAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVK 177
YAKC + A +VF+++ +D SW
Sbjct: 276 YAKCGMMEEANKVFERMKVKDV--------------------------VSW--------- 300
Query: 178 VKTALVDMYAKCGLVKVARNLFEQLREKR----VVSWNAMITGYAMHGHSTKALDLFEKM 233
A+V Y++ G A LFE++RE++ VV+W+A+I GYA G +ALD+F +M
Sbjct: 301 --NAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQM 358
Query: 234 KD-EVQPDHITFVGVLSACSRGGLFDEGR----------------------MFFESMVRD 270
+ +P+ +T V +LS C+ G G+ M +++
Sbjct: 359 RLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDM 418
Query: 271 YH-----------------IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW- 312
Y D SV +T ++ G +EA +L QM ++PD V
Sbjct: 419 YSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQM-LQPDNFVMP 477
Query: 313 GALLNSCKLHGHVKLAELALEKLI 336
A SC L +L L + I
Sbjct: 478 NAFTISCALMACARLGALRFGRQI 501
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A L+ +YS + A +FD + QRN W L+ Y +G E A++++Y + ++G
Sbjct: 517 VANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVG 576
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG----AALIDMYAKCSCV 124
LVPD TF L ACS +++G + NK + V G A ++D+ ++ +
Sbjct: 577 LVPDGVTFVVVLYACSHSGMVDQGINYFNGM--NK-DFGVVPGAEHYACMVDLLSRAGRL 633
Query: 125 VNARQVFDKILERDPSEATLVTVISA 150
A ++ + + P+ A V ++SA
Sbjct: 634 DEAMELI-RGMPMKPTPAVWVALLSA 658
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/530 (37%), Positives = 304/530 (57%), Gaps = 39/530 (7%)
Query: 18 SACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFP 77
+A + L A +F RIP + +N +IR+++ P ++ ++ + G+ DNFTFP
Sbjct: 33 AAPESLSYARYVFSRIPSPDTIAYNTIIRSHSRFFPSH-SLFYFFSMRSNGIPLDNFTFP 91
Query: 78 FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER 137
F LKACS L + +H +++ ++D+FV ALI +Y C + A +VFD++ ER
Sbjct: 92 FVLKACSRL---QINLHLHSLIVKYGLDSDIFVQNALICVYGYCGSLEMAVKVFDEMSER 148
Query: 138 D----------------------------------PSEATLVTVISASADIAALPQGREL 163
D P E T+++VISA + + L GR +
Sbjct: 149 DSVSWSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWV 208
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
F R ++V + TAL+DM+++CG + + +FE++ + V++W A+I G +HG S
Sbjct: 209 RAFIGRLGLGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGVHGRS 268
Query: 224 TKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTC 282
T+AL +F M K VQPD++TF GVL ACS GGL EG FES+ + Y +DP + HY C
Sbjct: 269 TEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYRMDPLLDHYGC 328
Query: 283 MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHD 342
MVD+LG +G L+EA D + +M +KP+ +W LL +C H ++ LAE K+ ++
Sbjct: 329 MVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHNNLGLAEKVKAKISKISSSQ 388
Query: 343 AGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNC 402
G+ V+LSN+Y A W A +R M ++ I K CS I V H F+SGD SHP
Sbjct: 389 NGDLVLLSNVYGAAGRWVEKASIRSKMREKRIGKEPGCSSINVDQTIHEFVSGDNSHPQS 448
Query: 403 DEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTR 462
++I L + G ++ GY+ T++V HD+E +E+ + + HSE+LA+AF +++ D
Sbjct: 449 EDITKFLSSIIGDLRNRGYMMQTKNVLHDIEEEEREHSLSYHSEKLAVAFAILSMKDKRT 508
Query: 463 LLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ I KNL+IC DCH +K IS ER+I +RD NR+HHF+ G+CSC DYW
Sbjct: 509 IRIMKNLRICYDCHSFMKHISVRFERKIIIRDRNRFHHFEKGLCSCHDYW 558
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 9/126 (7%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G G L T L+ ++S C + + +F+++ RN+ W LI +G A+ +
Sbjct: 215 LGLGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAM 274
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
++ + + G+ PD TF L ACS ++EG I E IR + D L+D Y
Sbjct: 275 FHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFES-IRKVYRMD-----PLLDHYG- 327
Query: 121 CSCVVN 126
C+V+
Sbjct: 328 --CMVD 331
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/527 (37%), Positives = 296/527 (56%), Gaps = 35/527 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + +++H YS D + LF+ +P+ + +NV+I +Y+ YE ++ L+
Sbjct: 274 GFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLF 333
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ +G NF F L + LS+++ GR++H I ++ + VG +L+DMYAKC
Sbjct: 334 REMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKC 393
Query: 122 SCVVNARQVFDKILERDP---------------------------------SEATLVTVI 148
A +F + +R ++T TV+
Sbjct: 394 EMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVL 453
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
ASA A+L G++LH F R NV + LVDMYAKCG +K A +FE++ ++ V
Sbjct: 454 KASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAV 513
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWNA+I+ YA +G A+ F KM + +QPD ++ +GVL ACS G ++G FF++M
Sbjct: 514 SWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAM 573
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
Y I P +HY CM+DLLG +GR EA L+ +M +PD +W ++LN+C+++ + L
Sbjct: 574 SPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSL 633
Query: 328 AELALEKLIELEP-HDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
AE A E+L +E DA YV +SNIYA A WE V ++K M +RGIKK A SW+EV
Sbjct: 634 AERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVN 693
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
+K H F S D +HPN DEI K+ L ++ GY P T SV D++ K + HSE
Sbjct: 694 HKIHVFSSNDQTHPNGDEIVKKINELTTEIEREGYKPDTSSVVQDIDEQMKIESLKYHSE 753
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVR 493
RLA+AF LI+TP+G +++ KNL+ C DCH AIK ISKI +R IT +
Sbjct: 754 RLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKRVITTQ 800
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 174/380 (45%), Gaps = 44/380 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDC--LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAI 58
+GF + L V L S C+ L A LF+ I ++ +N LI Y +G Y AI
Sbjct: 170 LGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAI 229
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
L+ ++ + G P +FTF LKA L G+++H + + D VG ++ Y
Sbjct: 230 HLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFY 289
Query: 119 AKCSCVVNARQVFDKILERDPSEATLV--------------------------------- 145
+K V+ R +F+++ E D +V
Sbjct: 290 SKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFA 349
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
T++S +A++++L GR++H + + + V +LVDMYAKC + A +F+ L ++
Sbjct: 350 TMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQR 409
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFF 264
VSW A+I+GY G L LF KM+ ++ D TF VL A + G+
Sbjct: 410 STVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLH 469
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV--WGALLNSCKLH 322
++R +++ +V + +VD+ G + +A + +M PD W AL+++ +
Sbjct: 470 AFIIRSGNLE-NVFSGSGLVDMYAKCGSIKDAVQVFEEM---PDRNAVSWNALISAYADN 525
Query: 323 GHVKLAELALEKLIE--LEP 340
G + A A K+I+ L+P
Sbjct: 526 GDGEAAIGAFTKMIQSGLQP 545
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 114/264 (43%), Gaps = 35/264 (13%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL 65
+ V ++ Y L +A LFD +P R + W +L+ YA N ++ A +L+ ++
Sbjct: 74 NTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMC 133
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGA--ALIDMYAKCSC 123
+PD TF L C+ ++H ++ ++T++F+ L+ Y +
Sbjct: 134 RSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRR 193
Query: 124 VVNARQVFDKILERD---------------------------------PSEATLVTVISA 150
+ A +F++IL++D PS+ T V+ A
Sbjct: 194 LDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKA 253
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
+ G++LHG S F + V ++ Y+K V RNLF ++ E VS+
Sbjct: 254 VVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSY 313
Query: 211 NAMITGYAMHGHSTKALDLFEKMK 234
N +I+ Y+ ++L+LF +M+
Sbjct: 314 NVVISSYSQAEQYEESLNLFREMQ 337
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 7/117 (5%)
Query: 139 PSEATLVTVISASADIAALPQGR--ELHGFSWRHRFELNV--KVKTALVDMYAKCGLVKV 194
P T T++ D A+PQ ++H F+ + F+ N+ V L+ Y + + +
Sbjct: 139 PDYVTFTTLLPGCND--AVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDL 196
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEV-QPDHITFVGVLSA 250
A LFE++ +K V++N +ITGY G T+A+ LF KM+ +P TF GVL A
Sbjct: 197 ACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKA 253
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM- 233
N ++ Y K G + AR+LF+ + ++ VV+W ++ YA + H +A LF +M
Sbjct: 74 NTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMC 133
Query: 234 KDEVQPDHITFVGVLSACS 252
+ PD++TF +L C+
Sbjct: 134 RSCTLPDYVTFTTLLPGCN 152
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLS 249
G V A +++++ K VS N MI+GY G + A LF+ M D +T+ ++
Sbjct: 58 GQVSAALKVYDEMPHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTV---VTWTILMG 114
Query: 250 ACSRGGLFDEGRMFFESMVRD 270
+ FDE F M R
Sbjct: 115 WYAGNNHFDEAFKLFRQMCRS 135
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/585 (37%), Positives = 321/585 (54%), Gaps = 73/585 (12%)
Query: 1 MGFGFHPVLATKLVHL---YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNG--PYE 55
+G H L L++ S D L A +LFD IPQ + FL+N +I+ + + P
Sbjct: 48 LGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPDAFLYNTIIKGFLHSQLLPTN 107
Query: 56 VAIELYYRLLEIGLVPDNFTFPFALKACSALS---------------------------- 87
+ LY +L+ ++P+NFTFP L AC +
Sbjct: 108 SILLLYSHMLQNSVLPNNFTFPSLLIACRKIQHGMQIHAHLFKFGFGAHSVCLNSLIHMY 167
Query: 88 ----AIEEGRRI-----HEDVIR--------NKW--------------ETDVFVGAALID 116
A+EE RR+ H D + +KW + + A++
Sbjct: 168 VTFQALEEARRVFHTIPHPDSVSWTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMA 227
Query: 117 MYAKCSCVVNARQVFDKILERDPS---EATLVTVISASADIAALPQGRELHGFSWRHRFE 173
Y + + A +FD++ + + + T++SA + AL QG+ +H + R+ E
Sbjct: 228 AYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSACTGLGALDQGKWIHEYIKRNGIE 287
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLFEQLRE--KRVVSWNAMITGYAMHGHSTKALDLFE 231
L+ K+ TA+VDMY KCG ++ A +F L + + SWN MI G AMHG+ A+ LF+
Sbjct: 288 LDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSWNCMIGGLAMHGNGEAAIQLFK 347
Query: 232 KM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+M + V PD ITF+ +L+AC+ GL +EGR +F M+R Y I+P ++H+ CMVDLLG +
Sbjct: 348 EMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIRVYGIEPRMEHFGCMVDLLGRA 407
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILS 350
G + EA LI +M V PD V G LL +CK H +++L E ++IELEP+++G YV+L+
Sbjct: 408 GMVPEARKLIDEMPVSPDVTVLGTLLGACKKHRNIELGEEIGRRVIELEPNNSGRYVLLA 467
Query: 351 NIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLK 410
N+YA A WE AK+RKLM DRG+KK+ S IE++ H F++G+ +HP E++AK+
Sbjct: 468 NLYANAGKWEDAAKVRKLMDDRGVKKAPGFSMIELQGTVHEFIAGERNHPQAKELHAKVY 527
Query: 411 WLEGRMKEAGYVPGTESVFHDVENDEK---ANMICCHSERLAIAFGLINTPDGTRLLITK 467
+ +K GYV T V H + DE+ N + HSE+LAIAFGL T G L I K
Sbjct: 528 EMLEHLKSVGYVADTNGVLHGHDFDEEEDGENPLYYHSEKLAIAFGLSRTKPGETLRILK 587
Query: 468 NLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
NL+IC+DCH A K IS + +REI VRD R+H FK G CSC DYW
Sbjct: 588 NLRICEDCHHACKLISTVFDREIIVRDRTRFHRFKMGQCSCQDYW 632
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/562 (37%), Positives = 304/562 (54%), Gaps = 65/562 (11%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+ + ++ L+ + A +LFD + ++++ W+ LI + N YE AI + + +I
Sbjct: 311 IASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKI 370
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC------ 121
G++ D AL AC+ L + G+ IH ++ E+ + + ALI MY+KC
Sbjct: 371 GVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVA 430
Query: 122 -------------------------SCVVNARQVFDKILERD------------------ 138
+ V NA+ +FD + E+D
Sbjct: 431 RKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFD 490
Query: 139 ---------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALV 183
P E TLV+VISA A +AAL QG+ +H + R+ +NV + T L+
Sbjct: 491 ETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLI 550
Query: 184 DMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHI 242
DMY KCG V+ A +F + EK + +WNA+I G AM+G +LD+F MK V P+ I
Sbjct: 551 DMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEI 610
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
TF+GVL AC GL DEG+ F SM+ D+ I P+V+HY CMVDLLG +G+L EA +L+ +
Sbjct: 611 TFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNR 670
Query: 303 MRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGV 362
M + PD WGALL +CK HG ++ KLIEL+P G +V+LSNIYA W+ V
Sbjct: 671 MPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDV 730
Query: 363 AKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYV 422
++R +M + K CS IE H FL+GD +HP+ D I L + ++K GY
Sbjct: 731 LEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYT 790
Query: 423 PGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFI 482
P V DV+ +EK + + HSE+LAIAFGLIN T + I KNL+IC+DCH A K I
Sbjct: 791 PDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLI 850
Query: 483 SKITEREITVRDVNRYHHFKDG 504
SK R+I VRD +R+HHF+ G
Sbjct: 851 SKAFCRKIVVRDRHRFHHFEQG 872
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 120/240 (50%), Gaps = 13/240 (5%)
Query: 29 LFDRIPQRNLFLWNVLI----RAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
L R PQ N W + RAY A LY +L L DN+T+P ++ACS
Sbjct: 167 LLMRYPQANT--WKMPAKASRRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACS 224
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATL 144
+ E +++H V++ +++DV+V LI+ ++ CS + +A +VF++ D +
Sbjct: 225 IRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLD--SVSW 282
Query: 145 VTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE 204
++++ +I + + + + + E ++ +++ ++ GLV A LF+++ E
Sbjct: 283 NSILAGYIEIGNVEEAKHI----YHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLE 338
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMF 263
K +V+W+A+I + + +A+ F M K V D + V LSAC+ + + G++
Sbjct: 339 KDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLI 398
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + +L T L+ +Y C C+ A ++F + ++ + WN LI A NG E +++++
Sbjct: 538 GLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMF 597
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN-KWETDVFVGAALIDMYAK 120
+ + + P+ TF L AC + ++EG+ +I + K + +V ++D+ +
Sbjct: 598 SNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGR 657
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISA 150
+ A ++ ++ + P AT ++ A
Sbjct: 658 AGKLQEAEELLNR-MPMTPDVATWGALLGA 686
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/539 (37%), Positives = 303/539 (56%), Gaps = 36/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ +YS C+ + F R+ ++L W +I YA N + A+EL+ + +
Sbjct: 423 VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR 482
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D L+A S L ++ + IH ++R K D + L+D+Y KC + A
Sbjct: 483 MEIDEMILGSILRASSVLKSMLIVKEIHCHILR-KGLLDTVIQNELVDVYGKCRNMGYAT 541
Query: 129 QVFDKILERDPSEATLVTVISA--------------------SADIAAL----------- 157
+VF+ I +D T + SA SAD AL
Sbjct: 542 RVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLS 601
Query: 158 --PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
+GRE+H + R F L + A+VDMYA CG ++ A+ +F+++ K ++ + +MI
Sbjct: 602 ALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMIN 661
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
Y MHG A++LF+KM+ E V PDHI+F+ +L ACS GL DEGR F + M +Y ++
Sbjct: 662 AYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELE 721
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P +HY C+VD+LG + + EA + + M+ +P VW ALL +C+ H ++ E+A ++
Sbjct: 722 PWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQR 781
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
L+ELEP + GN V++SN++A W V K+R M G++K CSWIE+ K H F +
Sbjct: 782 LLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTA 841
Query: 395 GDASHPNCDEIYAKLKWLEGRM-KEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
D SHP EIY KL + ++ +E GYV T+ V H+V+ EK M+ HSER+AIA+G
Sbjct: 842 RDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYG 901
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L+ TPD L ITKNL++C DCH K +SK+ R+I +RD NR+HHF+ G+CSCGD W
Sbjct: 902 LLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 143/316 (45%), Gaps = 41/316 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
LA KLV +Y C L +A ++FD +P R F WN +I AY NG A+ LY+ + G
Sbjct: 118 LAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEG 177
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ +FP LKAC+ L I G +H +++ + + F+ AL+ MYAK + AR
Sbjct: 178 VPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAAR 237
Query: 129 QVFDKILERD----------------------------------PSEATLVTVISASADI 154
++FD E+ P+ T+V+ ++A
Sbjct: 238 RLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGF 297
Query: 155 AALPQGRELHGF---SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+ G+E+H S H EL V AL+ MY +CG + A + Q+ VV+WN
Sbjct: 298 SYAKLGKEIHASVLKSSTHSSEL--YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWN 355
Query: 212 AMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
++I GY + +AL+ F M + D ++ +++A R G M + V
Sbjct: 356 SLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAG-MELHAYVIK 414
Query: 271 YHIDPSVQHYTCMVDL 286
+ D ++Q ++D+
Sbjct: 415 HGWDSNLQVGNTLIDM 430
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 174/373 (46%), Gaps = 41/373 (10%)
Query: 3 FGFHPV--LATKLVHLYSACDCLHNAHQLFDRIPQR-NLFLWNVLIRAYAWNGPYEVAIE 59
G+H + LV +Y+ D L A +LFD ++ + LWN ++ +Y+ +G +E
Sbjct: 211 LGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLE 270
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMY 118
L+ + G P+++T AL AC S + G+ IH V+++ ++++V ALI MY
Sbjct: 271 LFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMY 330
Query: 119 AKCSCVVNARQVFDKILERD---------------------------------PSEATLV 145
+C + A ++ ++ D E ++
Sbjct: 331 TRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMT 390
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
++I+AS ++ L G ELH + +H ++ N++V L+DMY+KC L F ++ +K
Sbjct: 391 SIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDK 450
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
++SW +I GYA + +AL+LF + K ++ D + +L A S +
Sbjct: 451 DLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIH 510
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
++R +D +Q+ +VD+ G + A + ++ K D W ++++S L+G+
Sbjct: 511 CHILRKGLLDTVIQNE--LVDVYGKCRNMGYATRVFESIKGK-DVVSWTSMISSSALNGN 567
Query: 325 VKLAELALEKLIE 337
A +++E
Sbjct: 568 ESEAVELFRRMVE 580
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 124/280 (44%), Gaps = 43/280 (15%)
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRN--KWETDVFVGAALIDMYAKCSCVVNARQVFDK 133
F + L+ C A+ +GR++H + + +E D F+ L+ MY KC + +A +VFD+
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 134 ILER----------------DPSEA-----------------TLVTVISASADIAALPQG 160
+ +R +P+ A + ++ A A + + G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK-RVVSWNAMITGYAM 219
ELH + + + ALV MYAK + AR LF+ +EK V WN++++ Y+
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 220 HGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
G S + L+LF +M P+ T V L+AC G+ S+++ S +
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS--THSSE 319
Query: 279 HYTC--MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
Y C ++ + G++ +A ++ QM D W +L+
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 358
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF +A +V +Y+ C L +A +FDRI ++ L + +I AY +G + A+EL+
Sbjct: 617 GFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELF 676
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMYA 119
++ + PD+ +F L ACS ++EGR + ++ +++E + + L+DM
Sbjct: 677 DKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLK-IMEHEYELEPWPEHYVCLVDMLG 735
Query: 120 KCSCVVNARQVFDKILERDPSEATLVTVISA 150
+ +CVV A + F K+++ +P+ +++A
Sbjct: 736 RANCVVEAFE-FVKMMKTEPTAEVWCALLAA 765
>gi|218192399|gb|EEC74826.1| hypothetical protein OsI_10663 [Oryza sativa Indica Group]
Length = 703
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/518 (40%), Positives = 298/518 (57%), Gaps = 47/518 (9%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDN------FTF 76
L +A +LFDR+PQR+ F W+ L+ YA +G E A+ LY R+ E P N FT
Sbjct: 111 LPSARELFDRMPQRDHFAWSALVSGYARHGQPEAALALYRRMQE---EPGNDGADNEFTA 167
Query: 77 PFALKACSALSAIEEGRRIHEDVIRNKWET---DVFVGAALIDMYAKCSCVVNARQVFDK 133
AL A +A GR +H V+R + D + +AL DMYAKC V +AR+VFD+
Sbjct: 168 SSALAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDR 227
Query: 134 ILERD----------------------------------PSEATLVTVISASADIAALPQ 159
+ RD P+E T V+ A A+ A
Sbjct: 228 MPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAEFAVESF 287
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
GR++HG + + ++AL+ MY+KCG + A +FE + + +VSW A+I+GYA
Sbjct: 288 GRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQ 347
Query: 220 HGHSTKALDLFEK-MKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
+G +AL F+ ++ ++PDH+TFVGVLSAC+ GL D+G F S+ Y I+ +
Sbjct: 348 NGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTAD 407
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
HY C++DLL SG+ + A +I M VKP+ +W +LL C++H +V LA A E L E+
Sbjct: 408 HYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEI 467
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDAS 398
EP + YV L+NIYA ++ V +R++M +GI K A SWIEV + H FL GD S
Sbjct: 468 EPENPATYVTLANIYASVGLFDEVEDVRRIMESKGITKMPASSWIEVGRRVHVFLVGDKS 527
Query: 399 HPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTP 458
HP DEIYA LK L +M E GYV E V HDVE+++K I HSERLA+AFG+I +P
Sbjct: 528 HPKADEIYALLKKLYVKMVEEGYVADIEFVLHDVEDEQKEQDIGYHSERLAVAFGIIASP 587
Query: 459 DGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVN 496
+G+ + + KNL+IC DCH AIK IS+I +R+I VRD N
Sbjct: 588 EGSPIKVFKNLRICGDCHAAIKLISQIVQRDIIVRDSN 625
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 135/530 (25%), Positives = 236/530 (44%), Gaps = 46/530 (8%)
Query: 4 GFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
G VL + L +Y+ C + +A ++FDR+P R+ W ++ Y G L+
Sbjct: 199 GGDAVLWSALADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLH 258
Query: 64 LLEI-GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+L G+ P+ FT+ L+AC+ + GR++H + ++ F +AL+ MY+KC
Sbjct: 259 MLRTRGVRPNEFTYAGVLRACAEFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCG 318
Query: 123 CVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
+ +A +VF+ + + P + VIS A + R + + +
Sbjct: 319 DMGSAVRVFEAMAK--PDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGV 376
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNA-----MITGYAMHGHSTKALDLFEKMKDEV 237
+ A GLV +F ++E+ + A +I + G +A + M V
Sbjct: 377 LSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMA--V 434
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP-SVQHYTCMVDLLGHSGRLDEA 296
+P+ + +L C R E++ + I+P + Y + ++ G DE
Sbjct: 435 KPNKFLWASLLGGCRIHKNVGLARRAAEAL---FEIEPENPATYVTLANIYASVGLFDEV 491
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGN--YVILSNIYA 354
D+ R+ G+ +S +++ L+ + H + Y +L +Y
Sbjct: 492 EDV---RRIMESKGITKMPASSW-----IEVGRRVHVFLVGDKSHPKADEIYALLKKLYV 543
Query: 355 RAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPN------------C 402
+ VA + ++ D ++ I ++ A G + P C
Sbjct: 544 KMVEEGYVADIEFVLHD--VEDEQKEQDIGYHSERLAVAFGIIASPEGSPIKVFKNLRIC 601
Query: 403 DEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTR 462
+ +A +K + ++ V + S+ K I HSERLA+AFG+I +P+G+
Sbjct: 602 GDCHAAIKLISQIVQRDIIVRDSNSL--------KEQDIGYHSERLAVAFGIIASPEGSP 653
Query: 463 LLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ + KNL+IC DCH AIK IS+I +R+I VRD NR+HHFKDGICSC DYW
Sbjct: 654 IKVFKNLRICGDCHTAIKLISQIVQRDIIVRDSNRFHHFKDGICSCRDYW 703
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/530 (37%), Positives = 303/530 (57%), Gaps = 39/530 (7%)
Query: 18 SACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFP 77
+A + L A +F RIP + +N +IR+++ P ++ ++ + G+ DNFTFP
Sbjct: 33 AAPESLSYARYVFSRIPSPDTIAYNTIIRSHSRFFPSH-SLSYFFSMRSNGIPLDNFTFP 91
Query: 78 FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER 137
F LKACS L + +H +++ +D+FV ALI +Y C + A +VFD++ ER
Sbjct: 92 FVLKACSRL---QINLHLHSLIVKYGLGSDIFVQNALICVYGYCGSLEMAVKVFDEMSER 148
Query: 138 D----------------------------------PSEATLVTVISASADIAALPQGREL 163
D P E T+++VISA + + L GR +
Sbjct: 149 DSVSWSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWV 208
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
F R F ++V + TAL+DM+++CG + + +FE++ + V++W A+I G +HG S
Sbjct: 209 RAFIGRLGFGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGIHGRS 268
Query: 224 TKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTC 282
+AL +F M K VQPD++TF GVL ACS GGL EG FES+ + Y +DP + HY C
Sbjct: 269 MEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYGMDPLLDHYGC 328
Query: 283 MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHD 342
MVD+LG +G L+EA D + +M +KP+ +W LL +C H ++ LAE K+ ++
Sbjct: 329 MVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHNNLGLAEKVKAKISKISSSQ 388
Query: 343 AGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNC 402
G+ V+LSN+Y A W A +R M ++ I K CS I V H F+SGD SHP
Sbjct: 389 NGDLVLLSNVYGAAGRWVEKASIRSKMREKRIGKEPGCSSINVDQTIHEFVSGDNSHPQS 448
Query: 403 DEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTR 462
++I L + G ++ GY+ T++V HD+E +E+ + + HSE+LA+AF +++ D
Sbjct: 449 EDITKFLSSIIGDLRNRGYMMQTKNVLHDIEEEEREHSLSYHSEKLAVAFAILSMKDKRT 508
Query: 463 LLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ I KNL+IC DCH +K IS ER+I +RD NR+HHF+ G+CSC DYW
Sbjct: 509 IRIMKNLRICYDCHSFMKHISVRFERKIIIRDRNRFHHFEKGLCSCHDYW 558
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 123/262 (46%), Gaps = 22/262 (8%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G G + L+ +Y C L A ++FD + +R+ W+ +I ++ NG A++L+
Sbjct: 114 GLGSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLF 173
Query: 62 YRL-LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
++ LE +VPD T + A S L +E GR + + R + V +G ALIDM+++
Sbjct: 174 EKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSR 233
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALP-QGRELHGFSWRHRF-----EL 174
C + + VF+K+ R+ V++ +A I L GR + + H +
Sbjct: 234 CGSIDESIVVFEKMAVRN--------VLTWTALINGLGIHGRSMEALAMFHSMRKSGVQP 285
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLR-----EKRVVSWNAMITGYAMHGHSTKALDL 229
+ + ++ + GLVK ++FE +R + + + M+ G +A D
Sbjct: 286 DYVTFSGVLVACSHGGLVKEGWDIFESIRKVYGMDPLLDHYGCMVDILGRAGLLNEAYDF 345
Query: 230 FEKMKDEVQPDHITFVGVLSAC 251
E+M ++P+ I + +L AC
Sbjct: 346 VERMP--MKPNSIIWRTLLGAC 365
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 9/126 (7%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GFG L T L+ ++S C + + +F+++ RN+ W LI +G A+ +
Sbjct: 215 LGFGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGIHGRSMEALAM 274
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
++ + + G+ PD TF L ACS ++EG I E IR + D L+D Y
Sbjct: 275 FHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFES-IRKVYGMD-----PLLDHYG- 327
Query: 121 CSCVVN 126
C+V+
Sbjct: 328 --CMVD 331
>gi|125540774|gb|EAY87169.1| hypothetical protein OsI_08570 [Oryza sativa Indica Group]
Length = 613
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/528 (36%), Positives = 305/528 (57%), Gaps = 41/528 (7%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYE-----VAIELYYRLLEIGLVPDNFTFPFAL 80
A +F + F +N L+R Y G A+ L+ +++ G+ PD++TFPF
Sbjct: 86 AASIFAALDDPEAFDYNTLMRGYVAGGGGGGRDPAAALRLFVDMVDDGVEPDSYTFPFVF 145
Query: 81 KACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD-- 138
KAC+ L A++EGR++ +++ ++ D +LI Y KC AR+ F+++ + +
Sbjct: 146 KACAQLGALQEGRQLQGHLVKLGFQRDEHSQNSLISFYGKCGEADLARRAFEQMEDDEQT 205
Query: 139 ---------------------------------PSEATLVTVISASADIAALPQGRELHG 165
P E+++V+ +SA A + A GR +H
Sbjct: 206 TASWSALLAAYTRAGRWAECVESFGAMVRAGWRPDESSMVSALSACAHLGAHDVGRSIHC 265
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
R+ LN + T+LVDMYAKCG ++ A +F+ + +K +++AM++G A+HG K
Sbjct: 266 ALLRNTARLNTFMSTSLVDMYAKCGCIENAAAVFDAMDDKNAWTYSAMVSGLALHGDGRK 325
Query: 226 ALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMV 284
AL++F+ M ++ +PD +VGVL+ACSR GL +EG F+ M ++ + P+ QHY CMV
Sbjct: 326 ALEVFDAMVREGHRPDAAVYVGVLNACSRAGLLEEGLRCFDRMRLEHKLTPNAQHYGCMV 385
Query: 285 DLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAG 344
DL+ +GRLD+A LI M P W +LLN+C++HG+++LAE AL++L L +AG
Sbjct: 386 DLMARAGRLDDARALIGNMPTGPTDTAWRSLLNACRIHGNLELAERALQELERLGATNAG 445
Query: 345 NYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDE 404
+Y+ILS+++ARA N + A R +DRG+ ++ S +EV H F+S D SHP D+
Sbjct: 446 DYIILSDMHARAHNRDAAAARRTEAVDRGLAQAPGYSAVEVHGATHRFVSQDRSHPRADD 505
Query: 405 IYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLL 464
IY L +E +++ GY P T + D +EK ++ HS++LA+AFGL++TP+G +
Sbjct: 506 IYEMLHQMEWQLRFEGYTPDTSELALDAGEEEKRRVVAAHSQKLAMAFGLLSTPEGAPVR 565
Query: 465 ITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ NL++ +CH IS+I REI VRD NR+H FK G CSCG+YW
Sbjct: 566 VVTNLRMSKECHAYSALISEIFGREIVVRDRNRFHRFKRGACSCGNYW 613
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 118/282 (41%), Gaps = 40/282 (14%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEVAI 58
+GF L+ Y C A + F+++ ++ W+ L+ AY G + +
Sbjct: 167 LGFQRDEHSQNSLISFYGKCGEADLARRAFEQMEDDEQTTASWSALLAAYTRAGRWAECV 226
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
E + ++ G PD + AL AC+ L A + GR IH ++RN + F+ +L+DMY
Sbjct: 227 ESFGAMVRAGWRPDESSMVSALSACAHLGAHDVGRSIHCALLRNTARLNTFMSTSLVDMY 286
Query: 119 AKCSCVVNARQVFDKILERD---------------------------------PSEATLV 145
AKC C+ NA VFD + +++ P A V
Sbjct: 287 AKCGCIENAAAVFDAMDDKNAWTYSAMVSGLALHGDGRKALEVFDAMVREGHRPDAAVYV 346
Query: 146 TVISASADIAALPQG-RELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE 204
V++A + L +G R H+ N + +VD+ A+ G + AR L +
Sbjct: 347 GVLNACSRAGLLEEGLRCFDRMRLEHKLTPNAQHYGCMVDLMARAGRLDDARALIGNMPT 406
Query: 205 KRV-VSWNAMITGYAMHGH---STKALDLFEKMKDEVQPDHI 242
+W +++ +HG+ + +AL E++ D+I
Sbjct: 407 GPTDTAWRSLLNACRIHGNLELAERALQELERLGATNAGDYI 448
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/572 (36%), Positives = 304/572 (53%), Gaps = 77/572 (13%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P +A+ LV LY+ C A +F+ + RN W VLI + G + ++EL+ ++
Sbjct: 325 PYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRA 384
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC----- 121
+ D F + C + + GR++H +++ V V +LI MYAKC
Sbjct: 385 ELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQS 444
Query: 122 --------------------------SCVVNARQVFDKILERD----------------- 138
V AR+ FD + E++
Sbjct: 445 AEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAE 504
Query: 139 -----------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
P T VT+ AD+ A G ++ G + + ++ V A
Sbjct: 505 EDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANA 564
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK-MKDEVQPD 240
++ MY+KCG + AR +F+ L K +VSWNAMITGY+ HG +A+++F+ +K +PD
Sbjct: 565 VITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPD 624
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
+I++V VLS CS GL EG+ +F+ M R ++I P ++H++CMVDLLG +G L EA DLI
Sbjct: 625 YISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLI 684
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
M +KP VWGALL++CK+HG+ +LAELA + + EL+ D+G+Y++++ IYA A +
Sbjct: 685 DDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSD 744
Query: 361 GVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAG 420
A++RKLM D+GIKK+ SW+EV NK H F + D SHP I KL L ++ G
Sbjct: 745 DSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLG 804
Query: 421 YVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIK 480
YV T+S ++ HSE+LA+AFGL+ P + I KNL+IC DCH IK
Sbjct: 805 YVR-TDSTRSEIH----------HSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIK 853
Query: 481 FISKITEREITVRDVNRYHHFKDGICSCGDYW 512
IS +T RE +RD R+HHF G CSCGDYW
Sbjct: 854 LISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 885
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 162/371 (43%), Gaps = 70/371 (18%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+A +LFD +P+R++ WN+++ A + +G A+++ + G+ D+ T+ +L AC+
Sbjct: 242 HALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACA 301
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP----- 139
LS++ G+++H VIRN D +V +AL+++YAK C A+ VF+ + +R+
Sbjct: 302 RLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTV 361
Query: 140 ----------------------------SEATLVTVISASADIAALPQGRELHGFSWRHR 171
+ L T+IS L GR+LH +
Sbjct: 362 LISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSG 421
Query: 172 FELNVKVKTALVDMYAKC-------------------------------GLVKVARNLFE 200
V V +L+ MYAKC G V AR F+
Sbjct: 422 QIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFD 481
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFD 258
+ EK V++WNAM+ Y HG L +++ M E V+PD +T+V + C+ G
Sbjct: 482 GMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANK 541
Query: 259 EGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
G V+ ID SV + ++ + GR+ EA + + VK D W A++
Sbjct: 542 LGDQIIGRTVKVGLIIDTSVAN--AVITMYSKCGRILEARKVFDFLNVK-DIVSWNAMIT 598
Query: 318 SCKLHGHVKLA 328
HG K A
Sbjct: 599 GYSQHGMGKQA 609
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 136/296 (45%), Gaps = 44/296 (14%)
Query: 6 HPVLATKLVHL--YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
HP + T V L Y+ L +A +LF R+P R++ WN L+ Y + Y V++E +
Sbjct: 88 HPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLS 147
Query: 64 LLEIGLV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+ G P+ FT A+K+C AL ++ V + + D V AAL+DM+ +C
Sbjct: 148 MHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCG 207
Query: 123 CVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
V A ++F +I ++P+ + + ++
Sbjct: 208 AVDLASRLFVRI--KEPT-----------------------------------MFCRNSM 230
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDH 241
+ Y K V A LF+ + E+ VVSWN M++ + G +ALD+ M+ + V+ D
Sbjct: 231 LAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDS 290
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDY-HIDPSVQHYTCMVDLLGHSGRLDEA 296
T+ L+AC+R G+ ++R+ HIDP V + +V+L SG EA
Sbjct: 291 TTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVA--SALVELYAKSGCFKEA 344
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/509 (38%), Positives = 301/509 (59%), Gaps = 12/509 (2%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + +A + +Y+ C +A+Q+F+ + R++ WN +I +A G + A+++
Sbjct: 41 LGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDV 100
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGA----ALID 116
+ L+ + P A S L ++ + R +++ ++ F G A++
Sbjct: 101 FRELVAL-----QCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRFKGLISWNAMLA 155
Query: 117 MYAKCSCVVNARQVFDKILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL 174
+Y V A ++F ++ + +P TL TV+ + +++AL G+ +H R R
Sbjct: 156 VYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCS 215
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
++ ++ AL+DMYA CG +K AR++F+ + + VVSW ++I+ Y HGH +A+DLFEKM
Sbjct: 216 SMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMC 275
Query: 235 DE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
+ ++PD I FV +L+ACS GL D G+ +F SM ++HI P ++HY CMVDLLG +G +
Sbjct: 276 GQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCI 335
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIY 353
EA D IM M +KP+ VWGALL +C++H ++ + LA + L+ L P G YV+LSNIY
Sbjct: 336 REAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIY 395
Query: 354 ARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLE 413
ARA W V+ +R +M +GIKK S E+ ++ H F GD SHP IY KL L
Sbjct: 396 ARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKLSELL 455
Query: 414 GRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICD 473
R++E GY P E+ HDVE ++K + HSE+LAIAF LINT GT + IT NL+ C
Sbjct: 456 RRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITMNLRTCS 515
Query: 474 DCHIAIKFISKITEREITVRDVNRYHHFK 502
DCH A K IS I REI ++DVNR H+ K
Sbjct: 516 DCHHAAKLISTIAGREIILKDVNRIHYMK 544
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 137/295 (46%), Gaps = 22/295 (7%)
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
GL+P P K+C+A + GR+IH R + +VFV + I MYA+C +A
Sbjct: 7 GLLPGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDA 66
Query: 128 RQVFDKILERDPSEATLVTVISASADIAALPQ----GRELHGFSWRHRFELNVKVKTALV 183
Q+F+++ RD V+S +A I+ GR + F + +
Sbjct: 67 YQMFEEMQYRD--------VVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMA 118
Query: 184 DMYAKCGLVKVA-----RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEV 237
+ G +V + +F+++R K ++SWNAM+ Y + +A++LF +M KD +
Sbjct: 119 SILPSMGKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGI 178
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
+PD +T VL +C G+ E +++ + S+ ++D+ + G L EA
Sbjct: 179 EPDAVTLATVLPSCGEVSALSLGKRIHE-VIKRRRMCSSMLLENALMDMYANCGCLKEAR 237
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI--ELEPHDAGNYVILS 350
D+ M + D W +++++ HGH + A EK+ LEP IL+
Sbjct: 238 DVFDSMGTR-DVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILA 291
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/572 (36%), Positives = 304/572 (53%), Gaps = 77/572 (13%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P +A+ LV LY+ C A +F+ + RN W VLI + G + ++EL+ ++
Sbjct: 305 PYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRA 364
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC----- 121
+ D F + C + + GR++H +++ V V +LI MYAKC
Sbjct: 365 ELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQS 424
Query: 122 --------------------------SCVVNARQVFDKILERD----------------- 138
V AR+ FD + E++
Sbjct: 425 AEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAE 484
Query: 139 -----------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
P T VT+ AD+ A G ++ G + + ++ V A
Sbjct: 485 EDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANA 544
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK-MKDEVQPD 240
++ MY+KCG + AR +F+ L K +VSWNAMITGY+ HG +A+++F+ +K +PD
Sbjct: 545 VITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPD 604
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
+I++V VLS CS GL EG+ +F+ M R ++I P ++H++CMVDLLG +G L EA DLI
Sbjct: 605 YISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLI 664
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
M +KP VWGALL++CK+HG+ +LAELA + + EL+ D+G+Y++++ IYA A +
Sbjct: 665 DDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSD 724
Query: 361 GVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAG 420
A++RKLM D+GIKK+ SW+EV NK H F + D SHP I KL L ++ G
Sbjct: 725 DSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLG 784
Query: 421 YVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIK 480
YV T+S ++ HSE+LA+AFGL+ P + I KNL+IC DCH IK
Sbjct: 785 YVR-TDSTRSEIH----------HSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIK 833
Query: 481 FISKITEREITVRDVNRYHHFKDGICSCGDYW 512
IS +T RE +RD R+HHF G CSCGDYW
Sbjct: 834 LISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 865
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 162/371 (43%), Gaps = 70/371 (18%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+A +LFD +P+R++ WN+++ A + +G A+++ + G+ D+ T+ +L AC+
Sbjct: 222 HALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACA 281
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP----- 139
LS++ G+++H VIRN D +V +AL+++YAK C A+ VF+ + +R+
Sbjct: 282 RLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTV 341
Query: 140 ----------------------------SEATLVTVISASADIAALPQGRELHGFSWRHR 171
+ L T+IS L GR+LH +
Sbjct: 342 LISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSG 401
Query: 172 FELNVKVKTALVDMYAKC-------------------------------GLVKVARNLFE 200
V V +L+ MYAKC G V AR F+
Sbjct: 402 QIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFD 461
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE--VQPDHITFVGVLSACSRGGLFD 258
+ EK V++WNAM+ Y HG L +++ M E V+PD +T+V + C+ G
Sbjct: 462 GMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANK 521
Query: 259 EGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
G V+ ID SV + ++ + GR+ EA + + VK D W A++
Sbjct: 522 LGDQIIGRTVKVGLIIDTSVAN--AVITMYSKCGRILEARKVFDFLNVK-DIVSWNAMIT 578
Query: 318 SCKLHGHVKLA 328
HG K A
Sbjct: 579 GYSQHGMGKQA 589
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 136/296 (45%), Gaps = 44/296 (14%)
Query: 6 HPVLATKLVHL--YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
HP + T V L Y+ L +A +LF R+P R++ WN L+ Y + Y V++E +
Sbjct: 68 HPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLS 127
Query: 64 LLEIGLV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+ G P+ FT A+K+C AL ++ V + + D V AAL+DM+ +C
Sbjct: 128 MHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCG 187
Query: 123 CVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
V A ++F +I ++P+ + + ++
Sbjct: 188 AVDLASRLFVRI--KEPT-----------------------------------MFCRNSM 210
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDH 241
+ Y K V A LF+ + E+ VVSWN M++ + G +ALD+ M+ + V+ D
Sbjct: 211 LAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDS 270
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDY-HIDPSVQHYTCMVDLLGHSGRLDEA 296
T+ L+AC+R G+ ++R+ HIDP V + +V+L SG EA
Sbjct: 271 TTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVA--SALVELYAKSGCFKEA 324
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 370 bits (950), Expect = e-99, Method: Compositional matrix adjust.
Identities = 191/514 (37%), Positives = 292/514 (56%), Gaps = 38/514 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + T L+ +Y L +A +FD + RN+F WN L+ Y++ G +E A+ L
Sbjct: 655 GFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLL 714
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ + G+ PD T W +I YA
Sbjct: 715 NQMEKEGIKPDLVT----------------------------WN-------GMISGYAMW 739
Query: 122 SCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVK 179
C A F ++ + P+ A++ ++ A A ++ L +G+E+H S R+ F +V V
Sbjct: 740 GCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVA 799
Query: 180 TALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQ 238
TAL+DMY+K +K A +F +++ K + SWN MI G+A+ G +A+ +F +M K V
Sbjct: 800 TALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVG 859
Query: 239 PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACD 298
PD ITF +LSAC GL EG +F+SM+ DY I P ++HY CMVDLLG +G LDEA D
Sbjct: 860 PDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWD 919
Query: 299 LIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN 358
LI M +KPD +WGALL SC++H ++K AE A + L +LEP+++ NY+++ N+Y+
Sbjct: 920 LIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNR 979
Query: 359 WEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKE 418
WE + LR+LM G++ SWI++ + H F S + HP+ +IY +L L MK+
Sbjct: 980 WEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKK 1039
Query: 419 AGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIA 478
GYVP V+ +++ EK ++ H+E+LAI +GLI G + + KN +IC DCH A
Sbjct: 1040 LGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSA 1099
Query: 479 IKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
K+IS + RE+ +RD R+HHF++G CSC D+W
Sbjct: 1100 AKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1133
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 151/311 (48%), Gaps = 37/311 (11%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWN-GPYEVAIELYYRLLEIG 68
A L+ Y +A +F RN WN + + + G + +E++ L G
Sbjct: 459 AKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKG 518
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+V D+ + ALK C+ + I G IH +I+ ++ DV++ AL++ Y +C + A
Sbjct: 519 VVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKAN 578
Query: 129 QVF------------DKILERDPSE---------------------ATLVTVISAS-ADI 154
QVF + I+ SE AT+V V+ AS +++
Sbjct: 579 QVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISEL 638
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L G+E HG+ R+ F+ +V V T+L+DMY K + A+ +F+ ++ + + +WN+++
Sbjct: 639 GFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLV 698
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+GY+ G AL L +M+ E ++PD +T+ G++S + G E FF M ++ +
Sbjct: 699 SGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQE-GV 757
Query: 274 DPSVQHYTCMV 284
P+ TC++
Sbjct: 758 MPNSASITCLL 768
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 138/311 (44%), Gaps = 44/311 (14%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF L L++ Y C L A+Q+F +P LWN I + + +EL+
Sbjct: 553 GFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELF 612
Query: 62 YRLLEIGLVPDNFTFPFALKAC-SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
++ L + T L+A S L + G+ H V+RN ++ DV+VG +LIDMY K
Sbjct: 613 RKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVK 672
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
+ +A+ VFD + R+ F+W
Sbjct: 673 NHSLTSAQAVFDNMKNRNI--------------------------FAW-----------N 695
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKRV----VSWNAMITGYAMHGHSTKALDLFEKMKDE 236
+LV Y+ G+ + A L Q+ ++ + V+WN MI+GYAM G +AL F +M+ E
Sbjct: 696 SLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQE 755
Query: 237 -VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
V P+ + +L AC+ L +G+ +R+ I+ V T ++D+ S L
Sbjct: 756 GVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIE-DVFVATALIDMYSKSSSLKN 814
Query: 296 ACDLIMQMRVK 306
A + +++ K
Sbjct: 815 AHKVFRRIQNK 825
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 370 bits (950), Expect = e-99, Method: Compositional matrix adjust.
Identities = 214/549 (38%), Positives = 302/549 (55%), Gaps = 48/549 (8%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++ T LV +Y + + A FD IP +N+ WN ++ AY NG A+EL+ +
Sbjct: 372 MVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQ 431
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK-WETDVFVGAALIDMYAKCSCVVN 126
L P+ ++ L C +S E R IH +V+ N + + + ++ M+A+ +
Sbjct: 432 SLAPNKVSYLAVLGCCEDVS---EARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEE 488
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISASAD 153
A FD + +D P + TLV+V+ AD
Sbjct: 489 AMAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCAD 548
Query: 154 IAALPQGRELHG-FSWRHRFELNVKVKTALVDMYAKCGL-VKVARNLFEQLREKR--VVS 209
+ L GR + S E +V V++A+++M AKCG V LF ++ + R +V+
Sbjct: 549 LGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVA 608
Query: 210 WNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGR--MFFE 265
WN MI YA HGH KAL LF M + V+PD TFV VLS CS GL ++G F
Sbjct: 609 WNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLA 668
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
V P V+HY C+VD+LG G L EA D I +M + D VW +LL +C +G +
Sbjct: 669 REVLGIEQQP-VEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDL 727
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKK-SIACSWIE 384
+ E A IEL D+ YV+LSNIYA A WE ++R+ M +R +KK + S I
Sbjct: 728 EGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRAPGKSSIV 787
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
VKN+ H F + D SHP DEIYA+L+ L+G ++EAGYVP T V HDVE ++K ++ H
Sbjct: 788 VKNRVHEFFARDRSHPQSDEIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYH 847
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF-KD 503
SE+LAIAFGLI+ P + + KNL++C DCH A KFI+++T+REI VRD NR+HHF KD
Sbjct: 848 SEKLAIAFGLISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKD 907
Query: 504 GICSCGDYW 512
G CSCGDYW
Sbjct: 908 GECSCGDYW 916
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 168/398 (42%), Gaps = 57/398 (14%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + +L LV +YS C L +A+ F + R + WN LI A + P V +LY
Sbjct: 54 GLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQ--SSPAAV-FDLY 110
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEG------------RRIHEDVIRNKWETDVF 109
R+ L P L + L AI G R +H+D+ + E D+F
Sbjct: 111 TRM---KLEERAENRPNRLTIIAVLGAIASGDPSSSSSSRAQARIVHDDIRGSDLERDLF 167
Query: 110 VGAALIDMYAKCSCVVNARQVFDKILERD------------------------------- 138
V AL+D Y KC CV +A +VF +I D
Sbjct: 168 VATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLE 227
Query: 139 ---PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
P+ A+ V ++S+ D ++LP R +H F +V V TALV MY +CG V +
Sbjct: 228 GLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDES 287
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRG 254
+FE + + VSWNAMI +A GH + A ++ +M+ E +P+ ITFV L A
Sbjct: 288 IAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSS 347
Query: 255 GLFDEGR-MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWG 313
D G + ++ V T +V + G +G +D A + K + W
Sbjct: 348 SSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAK-NIVSWN 406
Query: 314 ALLNSCKLHGHVKLAE--LALEKLIELEPHDAGNYVIL 349
A+L + +G + A A K L P+ +L
Sbjct: 407 AMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVL 444
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 147/325 (45%), Gaps = 40/325 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPY-EVAIELYYRLLEI 67
+AT L+ Y C C+ +A ++F RI +L WN I A A N + A+ L R+
Sbjct: 168 VATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLE 227
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
GL+P+ +F L +C S++ R IH V + DV V AL+ MY +C V +
Sbjct: 228 GLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDES 287
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
VF+ + R+ P++ T VT + A+
Sbjct: 288 IAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSS 347
Query: 155 AA--LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
++ L + LHG+ E +V V TALV MY G + AR F+ + K +VSWNA
Sbjct: 348 SSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNA 407
Query: 213 MITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
M+T Y +G + +A++LF MK + + P+ ++++ VL C E R +V +
Sbjct: 408 MLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED---VSEARSIHAEVVGNG 464
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEA 296
+V + SG L+EA
Sbjct: 465 LFAQESSIANGVVRMFARSGSLEEA 489
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 154/367 (41%), Gaps = 42/367 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF V+AT LV +Y C + + +F+ + RN WN +I A+A G A +
Sbjct: 262 LGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAI 321
Query: 61 YYRLLEIGLVPDNFTFPFALK-ACSALSA-IEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
Y+R+ + G P+ TF ALK ACS+ S + E +H + E DV VG AL+ MY
Sbjct: 322 YWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMY 381
Query: 119 AKCSCVVNARQVFDKILERD---------------------------------PSEATLV 145
+ AR FD I ++ P++ + +
Sbjct: 382 GSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYL 441
Query: 146 TVISASADIAALPQGRELHG-FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE 204
V+ D++ + R +H F + +V M+A+ G ++ A F+
Sbjct: 442 AVLGCCEDVS---EARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVV 498
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMF 263
K VSWN + + A+ F M+ E +PD T V V+ C+ G + GR
Sbjct: 499 KDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSI 558
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSG-RLDEACDLIMQM-RVKPDPGVWGALLNSCKL 321
+ + ++ V + +++++ G +DE L +M + D W ++ +
Sbjct: 559 QQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQ 618
Query: 322 HGHVKLA 328
HGH + A
Sbjct: 619 HGHGRKA 625
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 126/317 (39%), Gaps = 51/317 (16%)
Query: 49 AWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDV 108
+W GP Y +E T L+ C + + +GR++H +++ +
Sbjct: 8 SWPGPRSTKDHDDYIPIE--------TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARND 59
Query: 109 FVGAALIDMYAKCSCVVNARQVFDKILERD------------------------------ 138
+G L+ MY+KC + +A F + R
Sbjct: 60 LLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERA 119
Query: 139 ---PSEATLVTVISASAD------IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC 189
P+ T++ V+ A A ++ Q R +H E ++ V TAL+D Y KC
Sbjct: 120 ENRPNRLTIIAVLGAIASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKC 179
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST-KALDLFEKMKDE-VQPDHITFVGV 247
G V+ A +F +++ ++ WNA I A + +AL L +M E + P+ +FV +
Sbjct: 180 GCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAI 239
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
LS+C R + V + V T +V + G G +DE+ + M V+
Sbjct: 240 LSSCGDHSSLPLARS-IHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRN 298
Query: 308 DPGVWGALLNSCKLHGH 324
W A++ + GH
Sbjct: 299 HVS-WNAMIAAFAQCGH 314
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 197/530 (37%), Positives = 303/530 (57%), Gaps = 39/530 (7%)
Query: 18 SACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFP 77
SA L A +FD I + F +N +IRA+A + ++ L+ ++ G+ PD+FTFP
Sbjct: 33 SAPASLSYARSIFDLIAFPDTFAFNTIIRAHA-DSSPSFSLSLFSKMTMAGVSPDHFTFP 91
Query: 78 FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER 137
F LKAC+ L + G +H + + +++DV+V LI Y C + A + F+++ ER
Sbjct: 92 FVLKACARL---QTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKAFEEMPER 148
Query: 138 D----------------------------------PSEATLVTVISASADIAALPQGREL 163
D P E +++V+SA + + L G+ +
Sbjct: 149 DLVSWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWI 208
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
GF R+ E V + TALVDM+++CG ++ + +F+++ E+ V++W A+I G A+HG S
Sbjct: 209 RGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRS 268
Query: 224 TKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTC 282
+AL +F +M++ QPDH+TF GVL ACS GGL EG FES+ +Y ++P +HY C
Sbjct: 269 AEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGC 328
Query: 283 MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHD 342
MVDLLG +G L+EAC + M ++P+ +W LL +C H +++LAE EK+ EL+ +
Sbjct: 329 MVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINELDSYH 388
Query: 343 AGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNC 402
G+YV+LSN+Y W A +R M ++ I K CS I V + H F++GD +HP
Sbjct: 389 DGDYVLLSNVYGGVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDNNHPQF 448
Query: 403 DEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTR 462
+ I L + +K GY P +V D+E +EK + + HSE+LA+AF L+ D
Sbjct: 449 ESIREFLVSMIDSLKVVGYTPDISNVLFDIEEEEKESTLGYHSEKLAVAFALLCFKDSRT 508
Query: 463 LLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ + KNL+IC DCH +K+ S + EREI +RD NR+HHF G CSC DYW
Sbjct: 509 IRVMKNLRICHDCHCFMKYASDVFEREIIIRDRNRFHHFSKGSCSCRDYW 558
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G F L T LV ++S C C+ + ++FD + +RN+ W LI A +G A+ ++
Sbjct: 216 GLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMF 275
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW 104
Y + G PD+ TF L ACS + EG + E IRN++
Sbjct: 276 YEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFES-IRNEY 317
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 197/512 (38%), Positives = 302/512 (58%), Gaps = 12/512 (2%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + +A + +Y+ C +A+Q+F+ + R++ WN +I +A G + A+++
Sbjct: 151 LGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDV 210
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGA----ALID 116
+ L+ + P A S L ++ + R +++ ++ F G A++
Sbjct: 211 FRELVAL-----QCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRFKGLISWNAMLA 265
Query: 117 MYAKCSCVVNARQVFDKILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL 174
+Y V A ++F ++ + +P TL TV+ + +++AL G+ +H R R
Sbjct: 266 VYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCS 325
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
++ ++ AL+DMYA CG +K AR++F+ + + VVSW ++I+ Y HGH +A+DLFEKM
Sbjct: 326 SMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMC 385
Query: 235 DE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
+ ++PD I FV +L+ACS GL D G+ +F SM ++HI P ++HY CMVDLLG +G +
Sbjct: 386 GQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCI 445
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIY 353
EA D IM M +KP+ VWGALL +C++H ++ + LA + L+ L P G YV+LSNIY
Sbjct: 446 REAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIY 505
Query: 354 ARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLE 413
ARA W V+ +R +M +GIKK S E+ ++ H F GD SHP IY KL L
Sbjct: 506 ARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKLSELL 565
Query: 414 GRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICD 473
R++E GY P E+ HDVE ++K + HSE+LAIAF LINT GT + IT NL+ C
Sbjct: 566 RRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITMNLRTCS 625
Query: 474 DCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
DCH A K IS I REI ++DVNR H+ K I
Sbjct: 626 DCHHAAKLISTIAGREIILKDVNRIHYMKCNI 657
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 170/362 (46%), Gaps = 27/362 (7%)
Query: 6 HPVLA---TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
HP A KL+ Y+AC L A + D P R +NVL+R + A+ L+
Sbjct: 50 HPASAAVRVKLIQAYAACAALPAARAVLDASPDRTTVFFNVLLRGLTAASLHRDALLLFA 109
Query: 63 RLLEIG--LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ G PD++T+P ALK+C+A + GR+IH R + +VFV + I MYA+
Sbjct: 110 SMRPQGHACFPDHYTYPLALKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYAR 169
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQ----GRELHGFSWRHRFELNV 176
C +A Q+F+++ RD V+S +A I+ GR + F +
Sbjct: 170 CGRPDDAYQMFEEMQYRD--------VVSWNAMISGFAHAGLFGRAMDVFRELVALQCPK 221
Query: 177 KVKTALVDMYAKCGLVKVA-----RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
+ + G +V + +F+++R K ++SWNAM+ Y + +A++LF
Sbjct: 222 PDAGTMASILPSMGKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFM 281
Query: 232 KM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
+M KD ++PD +T VL +C G+ E +++ + S+ ++D+ +
Sbjct: 282 RMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHE-VIKRRRMCSSMLLENALMDMYANC 340
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI--ELEPHDAGNYVI 348
G L EA D+ M + D W +++++ HGH + A EK+ LEP I
Sbjct: 341 GCLKEARDVFDSMGTR-DVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAI 399
Query: 349 LS 350
L+
Sbjct: 400 LA 401
>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
Length = 610
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 211/538 (39%), Positives = 303/538 (56%), Gaps = 32/538 (5%)
Query: 6 HP--VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
HP V L+ + AC + A ++F +P +++ WN ++ + NG E A ++ R
Sbjct: 74 HPDTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMF-R 132
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEE-GRRIHEDVIRNKWETDV-------------- 108
++ + AL + A E+ R E W V
Sbjct: 133 IMPVRNAVSWNAMVAALACSGDMGAAEDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAME 192
Query: 109 FVGA----------ALIDMYAKCSCVVNARQVFDKILERD---PSEATLVTVISASADIA 155
F GA A++ Y K S +A +VF ++E P+ +TL +V+ ++++
Sbjct: 193 FFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLS 252
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL GR++H + + NV V T+L+ MY KCG + A +F+++ K +V+WNAMI+
Sbjct: 253 ALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMIS 312
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GYA HG +A+ LFEKMKDE V PD IT + VL+AC GL D G FE+M Y I+
Sbjct: 313 GYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIE 372
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
P + HY+CMVDLL +G L+ A ++I M +P P +G LL +C+++ +++ AE A K
Sbjct: 373 PQIDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARK 432
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
LIE +P +AG YV L+NIYA A W V+++R+ M D + K+ SW+E+K H F S
Sbjct: 433 LIEQDPQNAGAYVQLANIYAVANKWADVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRS 492
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
D HP I+ KL L+ MK GYVP + HDVE+ K+ M+ HSE+LAIAFGL
Sbjct: 493 NDRLHPQLGLIHDKLDRLQMLMKAMGYVPDLDFALHDVEDSLKSQMLMRHSEKLAIAFGL 552
Query: 455 INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I+T G L I KNL+IC DCH A K ISKI +REI +RD R+HHF+ G CSCGDYW
Sbjct: 553 ISTSPGMTLRIFKNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 610
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 21/162 (12%)
Query: 114 LIDMYAKCSCVV---NARQVFDKILERDP-SEATLVTVISASADIAALPQGRELHGFSWR 169
L+ YAK S ++ +AR++FD I D S TL++ A DI R
Sbjct: 49 LLAGYAKASGLIRLADARRLFDSIPHPDTVSYNTLLSCHFACGDIDGA-----------R 97
Query: 170 HRFEL----NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
F +V +V +K G + A +F + + VSWNAM+ A G
Sbjct: 98 RVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAVSWNAMVAALACSGDMGA 157
Query: 226 ALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
A DLF ++ D I + ++S G + FF +M
Sbjct: 158 AEDLFRNAPEKT--DAILWTAMVSGYMDTGNVQKAMEFFGAM 197
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 207/572 (36%), Positives = 305/572 (53%), Gaps = 77/572 (13%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P +A+ +V LY+ C C A ++F + RN W VLI + G + ++EL+ ++
Sbjct: 326 PYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRA 385
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
+ D F + C I G ++H +++ V V +LI MYAKC + N
Sbjct: 386 ELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQN 445
Query: 127 -------------------------------ARQVFDKILERD----------------- 138
AR+ FD + R+
Sbjct: 446 AELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAE 505
Query: 139 -----------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
P T VT+ ADI A G ++ G + + L+ V A
Sbjct: 506 EDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNA 565
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPD 240
++ MY+KCG + AR F+ L K +VSWNAMITGY+ HG +A+++F+ + ++ +PD
Sbjct: 566 VITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPD 625
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
+I++V VLS CS GL +EG+ +F+ M RD++I P ++H++CMVDLLG +G L EA +LI
Sbjct: 626 YISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLI 685
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
+M +KP VWGALL++CK HG+ LAELA + L +L+ +G Y++L+ +YA A +
Sbjct: 686 DEMPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSD 745
Query: 361 GVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAG 420
A++RKLM D+GIKKS SW+EV N+ H F + D SHP I KL L ++ G
Sbjct: 746 DSAQVRKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKIAHLG 805
Query: 421 YVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIK 480
YV TES ++ HSE+LA+AFG+++ P + I KNL+ICDDCH IK
Sbjct: 806 YVR-TESPRSEIH----------HSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCHTVIK 854
Query: 481 FISKITEREITVRDVNRYHHFKDGICSCGDYW 512
IS +T+RE +RD R+HHFK G CSC DYW
Sbjct: 855 LISTVTDREFVIRDGVRFHHFKGGSCSCMDYW 886
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 146/300 (48%), Gaps = 36/300 (12%)
Query: 17 YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTF 76
Y+ + +A ++F +P+R++ WN++I A + +G A+++ + G+ PD+ T+
Sbjct: 235 YAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTY 294
Query: 77 PFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILE 136
+L AC+ LS++E G+++H VIRN D +V +A++++YAKC C A++VF + +
Sbjct: 295 TSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRD 354
Query: 137 RDPSEAT---------------------------------LVTVISASADIAALPQGREL 163
R+ T L T+IS + + G +L
Sbjct: 355 RNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQL 414
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
H + V V +L+ MYAKCG ++ A +F + E+ +VSW MIT Y+ G+
Sbjct: 415 HSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNI 474
Query: 224 TKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
KA + F+ M + IT+ +L A + G ++G + M+ + + P Y +
Sbjct: 475 AKAREFFDDMSTR---NVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTL 531
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 138/295 (46%), Gaps = 42/295 (14%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG-LVP 71
+++ Y+ L +A +LF R+P R++ WN ++ Y +G + A++++ + + G +P
Sbjct: 98 MMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLP 157
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
+ FTF +K+C AL E ++ + + + D V AL+DM +C + A + F
Sbjct: 158 NAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQF 217
Query: 132 DKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGL 191
+I ++P+ + + +++ YAK
Sbjct: 218 SRI--KNPT-----------------------------------IICRNSMLVGYAKSHG 240
Query: 192 VKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSA 250
V A +F+ + E+ VVSWN +I+ + G +ALD+ M + V+PD T+ L+A
Sbjct: 241 VDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTA 300
Query: 251 CSRGGLFDEGRMFFESMVRDY-HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
C+R + G+ ++R+ HIDP V + MV+L G EA + +R
Sbjct: 301 CARLSSLEWGKQLHVQVIRNLPHIDPYVA--SAMVELYAKCGCFKEAKRVFSSLR 353
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 41/221 (18%)
Query: 79 ALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD 138
AL++C A SA+ R +H +I + VF+ L+ Y C + +AR + RD
Sbjct: 31 ALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLL-----RD 85
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
E T E NV +++ YAK G + A L
Sbjct: 86 --EIT-----------------------------EPNVITHNIMMNGYAKLGSLSDAVEL 114
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD--EVQPDHITFVGVLSACSRGGL 256
F ++ + V SWN +++GY G ALD+F M+ + P+ TF V+ +C G
Sbjct: 115 FGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGW 174
Query: 257 FDEGRMFFESMVR-DYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+ + + D DP VQ T +VD+L G +D A
Sbjct: 175 HEVALQLLGLLSKFDSQDDPDVQ--TALVDMLVRCGAMDFA 213
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 214/593 (36%), Positives = 322/593 (54%), Gaps = 88/593 (14%)
Query: 7 PVLATKLVHL--YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV---AIELY 61
P+ A +++ +S+ D + A +F ++P+ N F WN ++R A + A+ L+
Sbjct: 51 PLTAAEVIKFCAFSSRD-IDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLF 109
Query: 62 YRLLEIGLV-PDNFTFPFALKACSALSAIEEGRRI---------HED--VIRN------- 102
+L G V P+ FTFP LKAC+ S + EG++I HED VI N
Sbjct: 110 SAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVM 169
Query: 103 -----------------------------KWETDVFVGAALIDMYAKCSCVVNARQVFDK 133
K + +V + +ID + + +A+ +FD+
Sbjct: 170 CAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDE 229
Query: 134 ILER---------------------------------DPSEATLVTVISASADIAALPQG 160
+ R DP+ TLV+V+ A A I AL G
Sbjct: 230 MPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELG 289
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMH 220
+ +H ++ +++ E++ + +ALVDMY+KCG + A +FE L ++ ++W+A+I +AMH
Sbjct: 290 KWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMH 349
Query: 221 GHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQH 279
G + A+ F M K V P+ + ++G+LSACS GL +EGR FF MV+ + P ++H
Sbjct: 350 GRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEH 409
Query: 280 YTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
Y CMVDLLG +G L+EA +LI M ++PD +W ALL +CK+H ++K+ E E L+EL
Sbjct: 410 YGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELA 469
Query: 340 PHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASH 399
PHD+G+YV LSN+YA NWE VA++R M I+K CSWIE+ H FL D SH
Sbjct: 470 PHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSH 529
Query: 400 PNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPD 459
EI A L + +++ GY P T VF + + E+A + HSE++A+AFGLI+T
Sbjct: 530 SKAKEIQAMLGEMSMKLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAP 589
Query: 460 GTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
L I KNL+IC+DCH ++K IS I +R+I VRD R+H F+ G CSC DYW
Sbjct: 590 QHPLKIVKNLRICEDCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 165/386 (42%), Gaps = 69/386 (17%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
++N ++ + PQ L L + P ++ +L+ ++ G + D T +K
Sbjct: 5 IYNPNRTLNFSPQPPLILSKPFT---SCKTPRDLK-QLHAIFIKTGQIQDPLTAAEVIKF 60
Query: 83 CSALSA-IEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS---CVVNARQVFDKIL--- 135
C+ S I+ R V R E + F ++ + A+ + A +F +L
Sbjct: 61 CAFSSRDIDYARA----VFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDG 116
Query: 136 ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC------ 189
P+ T +V+ A A + L +G+++HG + F + V + LV MY C
Sbjct: 117 RVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDA 176
Query: 190 -----------------------------------------GLVKVARNLFEQLREKRVV 208
G +K A+NLF+++ + VV
Sbjct: 177 YSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVV 236
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR-MFFES 266
SWN MI+GYA +GH +A++LF++M+ + P+++T V VL A +R G + G+ + +
Sbjct: 237 SWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYA 296
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
ID + + +VD+ G +D+A + + K + W A++ + +HG +
Sbjct: 297 GKNKVEIDDVLG--SALVDMYSKCGSIDKALQ-VFETLPKRNAITWSAIIGAFAMHGRAE 353
Query: 327 LAELALEKLIE--LEPHDAGNYVILS 350
A + + + + P+D ILS
Sbjct: 354 DAIIHFHLMGKAGVTPNDVAYIGILS 379
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 206/573 (35%), Positives = 322/573 (56%), Gaps = 83/573 (14%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYE--VAIELYYRLLEIGLV-PDNFTFPFA 79
L AH++F+++PQRN F WN +IR ++ + + +AI L+ ++ + P+ FTFP
Sbjct: 68 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSV 127
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA-----KCSCVV--------- 125
LKAC+ I++G++IH ++ + D FV + L+ MY K +CV+
Sbjct: 128 LKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIERE 187
Query: 126 -------------------------------NARQVFDKILERD---------------- 138
AR +FDK+ +R
Sbjct: 188 MVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGF 247
Query: 139 ------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
P+ TLV+V+ A + + +L G LH ++ ++ + +
Sbjct: 248 FKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGS 307
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQP 239
AL+DMY+KCG+++ A +FE+L + V++W+AMI G+A+HG + A+D F KM+ V+P
Sbjct: 308 ALIDMYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRP 367
Query: 240 DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
+ ++ +L+ACS GL +EGR +F MV ++P ++HY CMVDLLG G LDEA +
Sbjct: 368 SDVAYINLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEF 427
Query: 300 IMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANW 359
I+ M +KPD +W ALL +C++H +V++ + L+++ PHD+G YV LSN+YA NW
Sbjct: 428 ILNMPIKPDDVIWKALLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNW 487
Query: 360 EGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEA 419
V+++R M + I+K CSWI++ H FL D SHP EI + L + +++ A
Sbjct: 488 SEVSEMRLRMKEMDIRKDPGCSWIDIDGVLHEFLVEDDSHPRAKEINSMLVEISDKLRLA 547
Query: 420 GYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAI 479
GY P T V ++E ++K N + HSE++A AFGLI+T G + I KNL+IC+DCH +I
Sbjct: 548 GYRPITTQVLLNLEEEDKENALHYHSEKMATAFGLISTSPGKPIRIVKNLRICEDCHSSI 607
Query: 480 KFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
K ISK+ +R+ITVRD R+HHF+DG CSC DYW
Sbjct: 608 KLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 640
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 210/572 (36%), Positives = 310/572 (54%), Gaps = 61/572 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF H V+A LV LYS + +A ++FD RNL WN +I YA G ++ ++
Sbjct: 136 GFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVF 195
Query: 62 Y-----RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHED-VIRN-KWETDVFVGAAL 114
R E PD FTF LKAC +L A EG ++H VIR ++ + AL
Sbjct: 196 REMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGAL 255
Query: 115 IDMYAKCSCVVN-ARQVFDKILERDPSEATLV---------------------------- 145
+DMY KC C++ A QVF+++ +++ + T V
Sbjct: 256 LDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRAD 315
Query: 146 -----TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE 200
+V+ AD A + QGR++H ++ + L+V V +L+DMY KCGL A F
Sbjct: 316 GHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFR 375
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDE 259
++ + VVSW AMI G HGH +A+ +FE+M+ E V+PD + ++ +LSACS GL +E
Sbjct: 376 EVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEE 435
Query: 260 GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC 319
R +F ++ D + P +HY CMVDLLG +G L EA DL+ M + P GVW LL++C
Sbjct: 436 CRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSAC 495
Query: 320 KLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIA 379
++H +V + A E L+ ++ + NYV+LSNI+A A +W ++R M RG++K
Sbjct: 496 RVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGAMRRRGLRKQGG 555
Query: 380 CSWIEVKNKAHAFL-SGDASHPNCDEIYAKLKWLEGRMKEA-GYVPG-----TESVFHDV 432
CSW+EV +AH F GD SHP +I L+ +E M+E GY PG +E+ HDV
Sbjct: 556 CSWVEVGKEAHFFYGGGDDSHPRAADICCVLRDVERTMRERLGYSPGSSSSSSEAALHDV 615
Query: 433 ENDEKANMICCHSERLAIAF------------GLINTPDGTRLLITKNLKICDDCHIAIK 480
+ + +A + HSERLA+ G+ T + + KNL++C DCH K
Sbjct: 616 DEESRAESLRAHSERLAVGLWLLLHHDHDHGEGMGGTKRKEVIRVYKNLRVCGDCHEFFK 675
Query: 481 FISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+S + R + VRD NR+H F+DG+CSC DYW
Sbjct: 676 GLSSVVGRVLVVRDANRFHRFEDGVCSCKDYW 707
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 172/402 (42%), Gaps = 61/402 (15%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GFG +L L+ +Y+ C L A ++F +P+RN+ W L+ + +G + L
Sbjct: 33 LGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRHGDARECLRL 92
Query: 61 YYRLLEIG-LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
+ + + P+ FT +LKAC + + G IH +R +E V +L+ +Y+
Sbjct: 93 LGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYS 152
Query: 120 KCSCVVNARQVFDKILERD--------------------------------------PSE 141
K + +AR+VFD + R+ P E
Sbjct: 153 KGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDE 212
Query: 142 ATLVTVISASADIAALPQGRELH------GFSWRHRFELNVKVKTALVDMYAKCG-LVKV 194
T +++ A + A +G ++H G S N + AL+DMY KC L+ +
Sbjct: 213 FTFASLLKACGSLGAAREGAQVHAAMVIRGVS----TASNAILAGALLDMYVKCRCLLPM 268
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSR 253
A +F +L +K + W +I G+A G +A++LF + V+ D V+ +
Sbjct: 269 AMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFAD 328
Query: 254 GGLFDEGRMFFESMVRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV- 311
L ++GR V+ +D SV + ++D+ G DEA + R P V
Sbjct: 329 FALVEQGRQVHCYTVKTPAGLDVSVAN--SLIDMYHKCGLTDEAA---RRFREVPARNVV 383
Query: 312 -WGALLNSCKLHGHVKLAELALEKLIE--LEPHDAGNYVILS 350
W A++N HGH + A E++ +EP + +LS
Sbjct: 384 SWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLS 425
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 108/229 (47%), Gaps = 40/229 (17%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
L+A +A SAI G ++H +++ + +D +G LIDMYAKC + A +VF + ER+
Sbjct: 11 LRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNV 70
Query: 139 ---------------------------------PSEATLVTVISASADIAALPQGRELHG 165
P+E TL + A + + G +HG
Sbjct: 71 VSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHG 130
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
R FE + V +LV +Y+K G + AR +F+ + +V+WNAMI+GYA GH
Sbjct: 131 ACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRD 190
Query: 226 ALDLFEKMK------DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
+L +F +M+ ++ QPD TF +L AC G EG +MV
Sbjct: 191 SLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMV 239
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 112/247 (45%), Gaps = 20/247 (8%)
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
+ ++ ASA +A+ G +LHG + F + + L+DMYAKCG +++A +F +
Sbjct: 7 IADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMP 66
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMK--DEVQPDHITFVGVLSACSRGGLFDEGR 261
E+ VVSW A++ G+ HG + + L L M+ +V P+ T L AC G G
Sbjct: 67 ERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGV 126
Query: 262 MFFESMVR----DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
+ VR +H+ + +V L GR+ +A + V + W A+++
Sbjct: 127 WIHGACVRAGFEGHHVVAN-----SLVLLYSKGGRIGDA-RRVFDGTVFRNLVTWNAMIS 180
Query: 318 SCKLHGHVKLAELALEKL----IELEPHDAGNYVILSNIYA---RAANWEGVAKLRKLMI 370
GH + + L ++ E E H + S + A A EG A++ M+
Sbjct: 181 GYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREG-AQVHAAMV 239
Query: 371 DRGIKKS 377
RG+ +
Sbjct: 240 IRGVSTA 246
>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 191/507 (37%), Positives = 290/507 (57%), Gaps = 3/507 (0%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ T LV Y DCL A +F +N+ WN LI Y + G ++ A +L ++ E G
Sbjct: 405 VCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEG 464
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD T+ + S EE + + +V A+I + ++A
Sbjct: 465 IKPDLVTWNSLVSGYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYMDAL 524
Query: 129 QVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
Q F ++ E + P+ T+ T++ A A + L G E+H FS RH F ++ + TAL+DMY
Sbjct: 525 QFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALIDMY 584
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFV 245
K G +KVA +F ++EK + WN M+ GYA++GH + LF++M K V+PD ITF
Sbjct: 585 GKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPDAITFT 644
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
+LS C GL +G +F+SM DY+I+P+++HY+CMVDLLG +G LDEA D I +
Sbjct: 645 ALLSGCKNSGLVMDGWKYFDSMKTDYNINPTIEHYSCMVDLLGKAGFLDEALDFIHAVPQ 704
Query: 306 KPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKL 365
K D +WGA+L +C+LH +K+AE+A L+ LEP+++ NY ++ NIY+ W V +L
Sbjct: 705 KADASIWGAVLAACRLHKDIKIAEIAARNLLRLEPYNSANYALMMNIYSTFDRWGDVERL 764
Query: 366 RKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGT 425
++ M G+K SWI+VK H F + SHP EIY +L L +K+ GYV
Sbjct: 765 KESMTALGVKIPNVWSWIQVKQTIHVFSTEGKSHPEEGEIYFELYQLISEIKKLGYVLDI 824
Query: 426 ESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKI 485
V ++++ EK ++ H+E+LA+ +GL+ T G+ + + KN +IC DCH K+IS
Sbjct: 825 NCVHQNIDDSEKEKVLLSHTEKLAMTYGLMKTKGGSPIRVVKNTRICHDCHTTAKYISLA 884
Query: 486 TEREITVRDVNRYHHFKDGICSCGDYW 512
REI +RD R+HHF +G CSC D W
Sbjct: 885 RNREIFLRDGGRFHHFMNGECSCKDRW 911
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 142/321 (44%), Gaps = 13/321 (4%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQR----NLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++ Y+ DCL+ A L + ++ WN L+ + G YE + + L G
Sbjct: 304 IISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLTNFRSLQSAG 363
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
PD+ + AL+A L G+ IH ++R+K E DV+V +L+D Y K C+ A
Sbjct: 364 FKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAE 423
Query: 129 QVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
VF ++ + ++IS +L + ++ +LV Y+
Sbjct: 424 VVFHHT--KNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLVSGYSM 481
Query: 189 CGLVKVARNLFEQLRE----KRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHIT 243
G + A + +++ VVSW AMI+G + + AL F +M++E V+P+ T
Sbjct: 482 SGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEENVKPNSTT 541
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
+L AC+ L G +R +D + T ++D+ G G+L A ++ +
Sbjct: 542 ICTLLRACAGSSLLKIGEEIHCFSMRHGFLD-DIYIATALIDMYGKGGKLKVAHEVFRNI 600
Query: 304 RVKPDPGVWGALLNSCKLHGH 324
+ K P W ++ ++GH
Sbjct: 601 KEKTLP-CWNCMMMGYAIYGH 620
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 123/267 (46%), Gaps = 35/267 (13%)
Query: 36 RNLFLWNVLIRAYA-WNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRR 94
RN LWN I +A + G + ++ L + G+ D+ LK C AL + G
Sbjct: 93 RNYLLWNSFIEEFASFGGDSHEILAVFKELHDKGVKFDSKALTVVLKICLALMELWLGME 152
Query: 95 IHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKI-LERD--------------- 138
+H +++ + DV + ALI++Y K + A QVFD+ L+ D
Sbjct: 153 VHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEK 212
Query: 139 -----------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
++ T+V ++ A + AL +G+++HG+ R N + +
Sbjct: 213 WEDALELFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNS 272
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPD 240
+V MY++ +++AR F+ + SWN++I+ YA++ A DL ++M+ V+PD
Sbjct: 273 IVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPD 332
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESM 267
IT+ +LS G ++ F S+
Sbjct: 333 IITWNSLLSGHLLQGSYENVLTNFRSL 359
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 136/325 (41%), Gaps = 38/325 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ +V +YS + L A FD N WN +I +YA N A +L + G
Sbjct: 269 ICNSIVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSG 328
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD T+ L +++ +E + + N R
Sbjct: 329 VKPDIITWNSLLSG---------------HLLQGSYE----------------NVLTNFR 357
Query: 129 QVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
+ + P ++ + + A + G+E+HG+ R + E +V V T+LVD Y K
Sbjct: 358 SLQSAGFK--PDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIK 415
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGV 247
+ A +F + K + +WN++I+GY G A L +MK+E ++PD +T+ +
Sbjct: 416 NDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSL 475
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR--- 304
+S S G +E + ++ + P+V +T M+ + +A QM+
Sbjct: 476 VSGYSMSGRSEEALAVI-NRIKSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEEN 534
Query: 305 VKPDPGVWGALLNSCKLHGHVKLAE 329
VKP+ LL +C +K+ E
Sbjct: 535 VKPNSTTICTLLRACAGSSLLKIGE 559
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 154/375 (41%), Gaps = 75/375 (20%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF L+ L++LY + A+Q+FD P + FLWN ++ A + +E A+EL+
Sbjct: 161 GFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDALELF 220
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
R+ + T L+AC L A+ EG++IH VIR ++ + +++ MY++
Sbjct: 221 RRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRN 280
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
+ + AR FD D + A+ ++IS+
Sbjct: 281 NRLELARVAFDST--EDHNSASWNSIISS------------------------------- 307
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRV----VSWNAMITGYAMHGHSTKALDLFEKMKDE- 236
YA + A +L +++ V ++WN++++G+ + G L F ++
Sbjct: 308 ----YAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLTNFRSLQSAG 363
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR-----DYHIDPS--------------- 276
+PD + L A G F+ G+ ++R D ++ S
Sbjct: 364 FKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAE 423
Query: 277 -VQHYT---------CMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWGALLNSCKLHG 323
V H+T ++ + G D A L+ QM+ +KPD W +L++ + G
Sbjct: 424 VVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLVSGYSMSG 483
Query: 324 HVKLAELALEKLIEL 338
+ A + ++ L
Sbjct: 484 RSEEALAVINRIKSL 498
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 92/230 (40%), Gaps = 36/230 (15%)
Query: 128 RQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYA 187
+++ DK ++ D T+V I + + L G E+H + F ++V + AL+++Y
Sbjct: 120 KELHDKGVKFDSKALTVVLKICLA--LMELWLGMEVHACLVKRGFHVDVHLSCALINLYE 177
Query: 188 KCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVG 246
K + A +F++ + WN ++ AL+LF +M+ + T V
Sbjct: 178 KYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDALELFRRMQSASAKATDGTIVK 237
Query: 247 VLSACSRGGLFDEGRMFFESMVR------------------------------DYHIDPS 276
+L AC + +EG+ ++R D D +
Sbjct: 238 LLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARVAFDSTEDHN 297
Query: 277 VQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWGALLNSCKLHG 323
+ ++ + L+ A DL+ +M VKPD W +LL+ L G
Sbjct: 298 SASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQG 347
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 207/518 (39%), Positives = 288/518 (55%), Gaps = 82/518 (15%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + L +VHLY+ C + A ++FD++PQR++ WN++I G E A +L
Sbjct: 142 LGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKL 201
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ + P E +V ++I YA+
Sbjct: 202 FAEM------------P---------------------------ERNVRSWTSMIGGYAQ 222
Query: 121 CSCVVNARQVFDKILERD-----PSEATLVTVISASADIAALPQGRELHGFSWRHRFELN 175
C +++ D LE + P+E T+V V+ A AD+ L GR +H FS R +E N
Sbjct: 223 CG---KSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKN 279
Query: 176 VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD 235
++V L+DMY KCG ++ A +F+ + E+ VVSW+AMI G A HG + AL LF KM +
Sbjct: 280 IRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMIN 339
Query: 236 E-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLD 294
V+P+ +TF+G+L ACS G+ ++GR +F SM RDY I P ++HY CMVDL +G L
Sbjct: 340 TGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQ 399
Query: 295 EACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYA 354
EA + IM M + P+ VWGALL CK+H +VKLAE A L +L+P + G YV+LSNIYA
Sbjct: 400 EAHEFIMNMPIAPNGVVWGALLGGCKVHKNVKLAEEATRHLSKLDPLNDGYYVVLSNIYA 459
Query: 355 RAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEG 414
A WE VA++RKLM DRG +W + L
Sbjct: 460 EAGRWEDVARVRKLMRDRG-------TW---------------------------EKLLQ 485
Query: 415 RMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDD 474
RMK GYVP T V D+E D+K + HSE+LA+ FGLI T GT + I KNL++C+D
Sbjct: 486 RMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTVIRIMKNLRVCED 545
Query: 475 CHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
CH A+K IS ++ REI VRD NR+H FK+G CSCGDYW
Sbjct: 546 CHAALKIISVVSTREIVVRDRNRFHCFKNGSCSCGDYW 583
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 154/334 (46%), Gaps = 43/334 (12%)
Query: 7 PVLATKLVHLYSAC---DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
P+ + L + S C A +F + + WN +R++A AI L+YR
Sbjct: 44 PLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYR 103
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
L E + PD++T F LKACS L + G+ +H V + ++++F+ ++ +YA C
Sbjct: 104 LREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGE 163
Query: 124 VVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALV 183
+ AR+VFDK+ +RD VI+ + IA L
Sbjct: 164 IGVARKVFDKMPQRD--------VITWNIMIARL-------------------------- 189
Query: 184 DMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHI 242
K G + A LF ++ E+ V SW +MI GYA G S +A+DLF +M+D + P+ +
Sbjct: 190 ---VKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEV 246
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
T V VL AC+ G GR + R + + +++ ++D+ G L++AC +
Sbjct: 247 TVVAVLVACADMGNLVLGRRIHDFSNRSGY-EKNIRVCNTLIDMYVKCGCLEDACRIFDN 305
Query: 303 MRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
M + W A++ HG + A K+I
Sbjct: 306 MEERTVVS-WSAMIAGLAAHGRAEDALALFNKMI 338
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 194/506 (38%), Positives = 307/506 (60%), Gaps = 15/506 (2%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T +V Y+ L A + FD +P+R++ WN ++ YA NG E A+ L+ +L G
Sbjct: 109 TAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEML--GAY 166
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
++ T+ + A + ++ R++ + +V ++I YA+ A ++
Sbjct: 167 RNSVTWNAMISAYMRVGDLDSARKLFNTMPGR----NVVTWNSMIAGYAQNGQSAMAIEL 222
Query: 131 FDKIL---ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYA 187
F +++ + P E T+V+VISA + AL G + F ++ +L++ A++ MY+
Sbjct: 223 FKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYS 282
Query: 188 KCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVG 246
+CG ++ A+ +F+++ + VVS+N +I+G+A HGH +A++L MK+ ++PD +TF+G
Sbjct: 283 RCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIG 342
Query: 247 VLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK 306
VL+ACS GL +EGR FES+ DP++ HY CMVDLLG G L++A + +M ++
Sbjct: 343 VLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPME 397
Query: 307 PDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLR 366
P GV+G+LLN+ ++H V+L ELA KL ELEP ++GN+++LSNIYA A W+ V ++R
Sbjct: 398 PHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIR 457
Query: 367 KLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTE 426
+ M G+KK+ SW+E K H F+ D SH D+IY L L +M+EAGY+
Sbjct: 458 EAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKS 517
Query: 427 SVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKIT 486
V DVE +EK ++ HSE+LAI + L+ + G + + KNL++C DCH AIK ISK+
Sbjct: 518 CVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLE 577
Query: 487 EREITVRDVNRYHHFKDGICSCGDYW 512
R I VRD NR+H F DG+CSC DYW
Sbjct: 578 GRVIIVRDNNRFHCFNDGLCSCKDYW 603
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 166/390 (42%), Gaps = 65/390 (16%)
Query: 44 LIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK 103
++R Y+ + + +Y ++ G+ PD F +P +K SA G H V++
Sbjct: 1 MLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIK-----SAGTGGIGFHAHVLKLG 55
Query: 104 WETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGREL 163
+D FV A+IDMYA+ NA E + L V+
Sbjct: 56 HGSDAFVRNAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMP-------------- 101
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
E NV TA+V YAK ++ AR F+ + E+ VVSWNAM++GYA +G +
Sbjct: 102 ---------ERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLA 152
Query: 224 TKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
+AL LF++M + + +T+ ++SA R G D R F +M +V + M
Sbjct: 153 EEALRLFDEMLGAYR-NSVTWNAMISAYMRVGDLDSARKLFNTMP-----GRNVVTWNSM 206
Query: 284 VDLLGHSGRLDEACDLIMQM----RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE-- 337
+ +G+ A +L +M ++ PD +++++C G ++L + L E
Sbjct: 207 IAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQ 266
Query: 338 ----LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
+ H+A + +Y+R + E ++ + M R + + +
Sbjct: 267 IKLSISGHNAMIF-----MYSRCGSMEDAKRVFQEMATRDVVSY------------NTLI 309
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVP 423
SG A+H + E L MKE G P
Sbjct: 310 SGFAAHGHGVEAIN----LMSTMKEGGIEP 335
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 199/535 (37%), Positives = 301/535 (56%), Gaps = 35/535 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L+ +Y+ C L ++ LF + +++ WN +I AY G + A L++R+ +G PD
Sbjct: 211 LITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPD 270
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+TF L AC++ +E+GR +H + ++ D + LI M+ +C + +AR+ F
Sbjct: 271 IYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFY 330
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
I +++ P T +V+ + A + AL +
Sbjct: 331 SIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALRE 390
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G+ +H S FE +V + TALV+MYAKCG + A+ F+ + K VVSW+AMI A
Sbjct: 391 GKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQ 450
Query: 220 HGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQ 278
HGH+ +AL+L M + + + +T VL ACS GG EG +F + +D+ I+ +
Sbjct: 451 HGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEE 510
Query: 279 HYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
+ +DLLG +G L EA ++ M K LL CK+HG V+ + ++++ L
Sbjct: 511 NTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVAL 570
Query: 339 EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDAS 398
EP + G+YV+L+N+YA A W+ VAKLR+ M +G+K+ CS IE ++K + F GD S
Sbjct: 571 EPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTS 630
Query: 399 HPNCDEIYAKLKWLEGRMK-EAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINT 457
+P EI A+L+ L RMK E GYVP T VFHDV +D+K ++ HSE++A+ FGLI +
Sbjct: 631 NPRNLEIRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITS 690
Query: 458 PDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
P G+ L I KNL++C DCH K SKIT R I VRD R+HHF+ GICSCGDYW
Sbjct: 691 PPGSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 745
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 160/344 (46%), Gaps = 39/344 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
LA ++ +Y C +A Q+FDRI QRN F W++L+ Y N Y+ A+E+Y ++
Sbjct: 4 LANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVRKE 63
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D +T L AC+ L +EEGR + +E DV V +LI ++AKC C+ A
Sbjct: 64 ISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAE 123
Query: 129 QVF-------------------------DKILER---------DPSEATLVTVISASADI 154
VF D L+ +P T ++ A +
Sbjct: 124 SVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSP 183
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L G+ +H + N+ V+ AL+ MYAKCG +K +++LF + K VVSWNAMI
Sbjct: 184 DFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMI 243
Query: 215 TGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV-RDYH 272
Y ++GH A LF +M PD TF +L AC+ ++GRM + R +
Sbjct: 244 AAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFD 303
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
D ++Q+ ++ + G L+ A + K + G W +L
Sbjct: 304 RDFAMQNN--LISMFTRCGSLESARRYFYSIE-KKELGAWNTML 344
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 190/415 (45%), Gaps = 43/415 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRI-PQRNLFLWNVLIRAYAWNGPYEVAIE 59
+GF V+AT L+HL++ C CL A +F + R++ +I AY +G ++A++
Sbjct: 97 LGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALD 156
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
Y+++ GL PD FT+ L ACS+ + +G+ IH+ ++ +K ++ V ALI MYA
Sbjct: 157 TYWKMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYA 216
Query: 120 KCSCVVNARQVF-----------------------DK----------ILERDPSEATLVT 146
KC + +++ +F DK L P T +
Sbjct: 217 KCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSS 276
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ A A L GR LH F+ + ++ L+ M+ +CG ++ AR F + +K
Sbjct: 277 ILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKE 336
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+ +WN M+ YA AL L++ M E PD TF V+ +C+ G EG+ F
Sbjct: 337 LGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGK-FIH 395
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
+ V T +V++ G L +A + K D W A++ + HGH
Sbjct: 396 ECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNK-DVVSWSAMIAASAQHGHA 454
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAAN----WEGVAKLRKLMIDRGIKK 376
+ A L L L+ L+ A N V S++ ++ +EG+ L D GI++
Sbjct: 455 EEA-LELSHLMNLQG-IAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIER 507
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 122/257 (47%), Gaps = 37/257 (14%)
Query: 107 DVFVGAALIDMYAKCSCVVNARQVFDKILERDP----------------SEA-------- 142
D F+ +I MY KC +ARQVFD+I +R+ EA
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 143 ---------TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVK 193
TL +V++A + + +GR + + FE +V V T+L+ ++AKCG ++
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120
Query: 194 VARNLFEQLREKR-VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSAC 251
A ++F + R ++S AMI Y HG + ALD + KM+ + ++PD T+ +L AC
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180
Query: 252 SRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV 311
S +G+ + ++ H ++ ++ + G L ++ L + M VK D
Sbjct: 181 SSPDFLLDGKHIHKHILESKHF-GNISVRNALITMYAKCGSLKDSKSLFLTMDVK-DVVS 238
Query: 312 WGALLNSCKLHGHVKLA 328
W A++ + L+GH K A
Sbjct: 239 WNAMIAAYTLYGHDKDA 255
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/524 (36%), Positives = 304/524 (58%), Gaps = 35/524 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F L L+HLY C + AH++FD++ +++ W LI YA N AI L
Sbjct: 82 FAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLP 141
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+L+ P+ FTF LKA A + G +IH ++ W DV+VG+AL+DMYA+C
Sbjct: 142 GMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCG 201
Query: 123 CVVNARQVFDKI------------------------------LERDPSEATLVT---VIS 149
+ A VFDK+ ++R+ EAT T + S
Sbjct: 202 KMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFS 261
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A A I AL QG+ +H + R +L V ++DMYAK G + AR +FE++ K +V+
Sbjct: 262 ALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVT 321
Query: 210 WNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WN+M+T +A +G +A+ FE+M K + + I+F+ +L+ACS GGL EG+ +F+ M+
Sbjct: 322 WNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFD-MI 380
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
++Y+++P ++HY +VDLLG +G L+ A I +M ++P VWGALL +C++H + K+
Sbjct: 381 KEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVG 440
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
+ A + + +L+P D+G V+L NIYA +W+ A++RK+M G+KK ACSW+E++N
Sbjct: 441 QFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIENS 500
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
H F++ D +HP +EIY + ++++ GYVP + V V+ E+ + HSE++
Sbjct: 501 VHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKI 560
Query: 449 AIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITV 492
A+AF LI P G + I KN++IC DCH A K+ISK+ EREI +
Sbjct: 561 ALAFALIQMPAGATIRIMKNIRICGDCHSAFKYISKVFEREIVI 604
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 143/301 (47%), Gaps = 36/301 (11%)
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L P + + AC+ +++ R+IH + +++ D F+ +LI +Y KC VV A
Sbjct: 47 LAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAH 106
Query: 129 QVFDKILERD----------------PSEA-----------------TLVTVISASADIA 155
+VFDK+ +D P+EA T +++ A A
Sbjct: 107 KVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYA 166
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
G ++H + + + +V V +AL+DMYA+CG + +A +F++L K VSWNA+I+
Sbjct: 167 DSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALIS 226
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
G+A G AL +F +M ++ + H T+ + SA + G ++G+ M++
Sbjct: 227 GFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKL 286
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
+ T M+D+ SG + +A + ++ K D W ++L + +G K A E+
Sbjct: 287 TAFVGNT-MLDMYAKSGSMIDARKVFERVLNK-DLVTWNSMLTAFAQYGLGKEAVSHFEE 344
Query: 335 L 335
+
Sbjct: 345 M 345
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 136 ERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVA 195
E P+ I+A A L R++H RF + + +L+ +Y KCG V A
Sbjct: 46 ELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEA 105
Query: 196 RNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRG 254
+F+++R K +VSW ++I GYA + +A+ L M K +P+ TF +L A G
Sbjct: 106 HKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAV--G 163
Query: 255 GLFDE---GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV 311
D G++ ++ D+H D V + ++D+ G++D A + ++ K GV
Sbjct: 164 AYADSGIGGQIHALAVKCDWHEDVYVG--SALLDMYARCGKMDMATAVFDKLDSK--NGV 219
Query: 312 -WGALLNSCKLHGHVKLAELALEKLIELE 339
W AL++ G E AL E++
Sbjct: 220 SWNALISGFARKGD---GETALMVFAEMQ 245
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 206/572 (36%), Positives = 304/572 (53%), Gaps = 77/572 (13%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P +A+ L+ LY+ C A ++F+ + RN W VLI + ++EL+ ++
Sbjct: 305 PYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRA 364
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS---- 122
+ D F + C + GR++H +++ + V +LI +YAKC
Sbjct: 365 ELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQN 424
Query: 123 ---------------------------CVVNARQVFDKILERD----------------- 138
++ AR+ FD + R+
Sbjct: 425 AEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAE 484
Query: 139 -----------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
P T VT+ ADI A G ++ G + + LNV V A
Sbjct: 485 EDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANA 544
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPD 240
+ MY+KCG + A+ LF+ L K VVSWNAMITGY+ HG +A F+ M + +PD
Sbjct: 545 AITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPD 604
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
+I++V VLS CS GL EG+++F+ M R + I P ++H++CMVDLLG +G L EA DLI
Sbjct: 605 YISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLI 664
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
+M +KP VWGALL++CK+HG+ +LAELA + + EL+ D+G+Y++L+ IY+ A +
Sbjct: 665 DKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSD 724
Query: 361 GVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAG 420
A++RKLM D+GIKK+ SW+EV+NK H F + D SHP I K+ L ++ G
Sbjct: 725 DSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLG 784
Query: 421 YVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIK 480
YV TES ++ HSE+LA+AFG+++ P + I KNL+IC DCH IK
Sbjct: 785 YVR-TESPRSEIH----------HSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIK 833
Query: 481 FISKITEREITVRDVNRYHHFKDGICSCGDYW 512
IS +T+RE +RD R+HHFK G CSCGDYW
Sbjct: 834 LISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 144/300 (48%), Gaps = 36/300 (12%)
Query: 17 YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTF 76
Y+ + +A + F+ + +R++ WN++I A + +G A+ L + G+ D+ T+
Sbjct: 214 YAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTY 273
Query: 77 PFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILE 136
+L AC+ L ++ G+++H VIR+ + D +V +ALI++YAKC A++VF+ + +
Sbjct: 274 TSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQD 333
Query: 137 RDPSEAT---------------------------------LVTVISASADIAALPQGREL 163
R+ T L T+IS + L GR+L
Sbjct: 334 RNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQL 393
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
H + + V +L+ +YAKCG ++ A +F + E+ +VSW +MIT Y+ G+
Sbjct: 394 HSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNI 453
Query: 224 TKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
KA + F+ M + IT+ +L A + G ++G + +M+ + P Y +
Sbjct: 454 IKAREFFDGMATR---NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 510
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 127/291 (43%), Gaps = 50/291 (17%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG-LVP 71
+++ Y+ L +A +LFDR+P+R++ WN L+ Y + +E + + G +P
Sbjct: 77 MMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLP 136
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVF----VGAALIDMYAKCSCVVNA 127
+ FTF +K+C AL R + ++ W+ D + V AL+DM+ +C V A
Sbjct: 137 NAFTFCCVMKSCGALGC----RELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFA 192
Query: 128 RQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYA 187
++F +I ER + + +++ YA
Sbjct: 193 SRLFSQI-ERP------------------------------------TIFCRNSMLAGYA 215
Query: 188 KCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVG 246
K + A FE + E+ VVSWN MI + G +AL L +M + V+ D T+
Sbjct: 216 KLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTS 275
Query: 247 VLSACSRGGLFDEGRMFFESMVRDY-HIDPSVQHYTCMVDLLGHSGRLDEA 296
L+AC+R G+ ++R IDP V + +++L G EA
Sbjct: 276 SLTACARLFSLGWGKQLHAKVIRSLPQIDPYVA--SALIELYAKCGSFKEA 324
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 212/566 (37%), Positives = 315/566 (55%), Gaps = 56/566 (9%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAY---AWNGPYEVAI 58
G F + L+ + S + L A ++F+ I +FL+N LI + +A
Sbjct: 176 GLSFQTYCLSHLIKISSKFN-LPYAFKIFNYISNPTIFLYNTLISSLINQTNQNQIHLAF 234
Query: 59 ELYYRLL-EIGLVPDNFTFPFALKAC-SALSAIEEGRRIHEDVIRN-KWETDVFVGAALI 115
LY ++L L P++FTFP KAC S S G +H V++ + D FV A+L+
Sbjct: 235 SLYNKILTNKNLQPNSFTFPSLFKACCSNQSWFHYGPLLHTHVLKFLQPPFDNFVQASLL 294
Query: 116 DMYAKCSCVVNARQVFDKILERD------------------------------------- 138
+ YAK + +R +FD+I E D
Sbjct: 295 NFYAKYGKMCVSRYIFDRINEPDLATWNVILNAYARSSSYHSYSNSFDDADFSLESLYLF 354
Query: 139 ---------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC 189
P+E T+V +ISA +++ A+ QG +H F R++ ++N V TA VDMY+KC
Sbjct: 355 RDMQVIGIRPNEVTIVALISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAFVDMYSKC 414
Query: 190 GLVKVARNLFEQLRE--KRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVG 246
G + +A +F+++ E + + AMI G+A+HG+ +AL+L+ KMK + + PD TFV
Sbjct: 415 GCLNLACQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKMKFKGLVPDSATFVV 474
Query: 247 VLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVK 306
+ ACS GL +EG F+SM + ++P ++HY C++DLLG +GRL EA + + M +K
Sbjct: 475 TMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWLADMPMK 534
Query: 307 PDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLR 366
P+ +W +LL + ++HG++ + E+AL KLIELEP +GNYV+LSN+YA V ++R
Sbjct: 535 PNAVLWRSLLGAARIHGNLGVGEVALTKLIELEPETSGNYVLLSNMYASVGRVNDVKRVR 594
Query: 367 KLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTE 426
KLM G+ K S +E+K H FL+GD SHP EIY K+ + R++E G+ T
Sbjct: 595 KLMKHHGVNKLPGFSLVEIKGAMHEFLTGDRSHPFSKEIYLKIAEINSRLEEYGHKARTS 654
Query: 427 SVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKIT 486
D+E ++K ++ HSERLAIAF LI +P + I KNL++C DCH K IS
Sbjct: 655 EALFDLEEEDKEGVLSYHSERLAIAFALIASPSSLAIRIIKNLRVCGDCHAFTKLISVAY 714
Query: 487 EREITVRDVNRYHHFKDGICSCGDYW 512
REI VRD NR+HHFKDG CSC DYW
Sbjct: 715 HREIIVRDRNRFHHFKDGSCSCLDYW 740
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 207/543 (38%), Positives = 313/543 (57%), Gaps = 44/543 (8%)
Query: 11 TKLVHL--YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI- 67
TKL+ L S+ L A +F IP + WN +IR A + A+ +YR +
Sbjct: 37 TKLLELCAISSFGDLSYALHIFRYIPYPSTNDWNAVIRGTALSSDPANAV-FWYRAMAAS 95
Query: 68 -GL-VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
GL D T FALKAC+ A E ++H ++R + DV + L+D YAK +
Sbjct: 96 NGLHRIDALTCSFALKACARALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLD 155
Query: 126 NARQVFDKILERD----------------------------------PSEATLVTVISAS 151
A+++FD++ + D P+ T+ + A
Sbjct: 156 LAQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLAC 215
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-EKRVVSW 210
+ + AL +G +H + + NV+V ++DMYAKCG + A +FE +R +K +++W
Sbjct: 216 SQLGALKEGESVHKYIVEEKLNSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITW 275
Query: 211 NAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
N MI +AMHG KALDLFEK+ + + PD ++++ VL AC+ GL ++G F SM +
Sbjct: 276 NTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQ 335
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
++P+++HY MVDLLG +GRL EA D++ + P+ +W LL +C+ +G V++AE
Sbjct: 336 R-GLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPF-PNMVLWQTLLGACRTYGDVEMAE 393
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
LA KL+E+ G++V+LSN+YA W+ V ++R M R +KK+ S+IE+K K
Sbjct: 394 LASRKLVEMGFISCGDFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKM 453
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLA 449
+ F++GD SH +C EIYAKL + R+K GY T +V HD+ +++K N +C HSE+LA
Sbjct: 454 YKFVNGDQSHSSCREIYAKLDEINLRIKAYGYSADTSNVLHDIGDEDKENALCYHSEKLA 513
Query: 450 IAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
+AFGL T +GT + + KNL+IC DCH+ IK ISKI REI VRD R+H FK+G+CSC
Sbjct: 514 VAFGLTCTEEGTPIQVIKNLRICGDCHVVIKLISKIYIREIIVRDRTRFHRFKEGLCSCK 573
Query: 510 DYW 512
DYW
Sbjct: 574 DYW 576
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 35/255 (13%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF +L T L+ Y+ L A +LFD +PQ ++ WN LI +A AI +
Sbjct: 133 GFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTF 192
Query: 62 YRL-LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
R+ ++ L P+ T AL ACS L A++EG +H+ ++ K ++V V +IDMYAK
Sbjct: 193 KRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLNSNVQVCNVVIDMYAK 252
Query: 121 CSCVVNARQVFDK----------------------------ILER------DPSEATLVT 146
C + A VF+ + E+ P + +
Sbjct: 253 CGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLA 312
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V+ A + G +L + E N+K ++VD+ + G +K A ++ L
Sbjct: 313 VLCACNHAGLVEDGLKLFNSMTQRGLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPFPN 372
Query: 207 VVSWNAMITGYAMHG 221
+V W ++ +G
Sbjct: 373 MVLWQTLLGACRTYG 387
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 207/543 (38%), Positives = 313/543 (57%), Gaps = 44/543 (8%)
Query: 11 TKLVHL--YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI- 67
TKL+ L S+ L A +F IP + WN +IR A + A+ +YR +
Sbjct: 37 TKLLELCAISSFGDLSYALHIFRYIPYPSTNDWNAVIRGTALSSDPANAV-FWYRAMAAS 95
Query: 68 -GL-VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
GL D T FALKAC+ A E ++H ++R + DV + L+D YAK +
Sbjct: 96 NGLHRIDALTCSFALKACARALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLD 155
Query: 126 NARQVFDKILERD----------------------------------PSEATLVTVISAS 151
A+++FD++ + D P+ T+ + A
Sbjct: 156 LAQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLAC 215
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR-EKRVVSW 210
+ + AL +G +H + + + NV+V ++DMYAKCG + A +FE +R +K +++W
Sbjct: 216 SQLGALKEGESVHKYIVEEKLDSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLITW 275
Query: 211 NAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
N MI +AMHG KALDLFEK+ + + PD ++++ VL AC+ GL ++G F SM +
Sbjct: 276 NTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMTQ 335
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
++P+++HY MVDLLG +GRL EA D++ + P+ +W LL +C+ +G V++AE
Sbjct: 336 R-GLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPF-PNMVLWQTLLGACRTYGDVEMAE 393
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
LA KL+E+ G +V+LSN+YA W+ V ++R M R +KK+ S+IE+K K
Sbjct: 394 LASRKLVEMGFISCGXFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKM 453
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLA 449
+ F++GD SH +C EIYAKL + R+K GY T +V HD+ +++K N +C HSE+LA
Sbjct: 454 YKFVNGDQSHSSCREIYAKLDEINLRIKAYGYSADTSNVLHDIGDEDKENALCYHSEKLA 513
Query: 450 IAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
+AFGL T +GT + + KNL+IC DCH+ IK ISKI REI VRD R+H FK+G+CSC
Sbjct: 514 VAFGLTCTEEGTPIQVIKNLRICGDCHVVIKLISKIYIREIIVRDRTRFHRFKEGLCSCK 573
Query: 510 DYW 512
DYW
Sbjct: 574 DYW 576
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 35/255 (13%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF +L T L+ Y+ L A +LFD +PQ ++ WN LI +A AI +
Sbjct: 133 GFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTF 192
Query: 62 YRL-LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
R+ ++ L P+ T AL ACS L A++EG +H+ ++ K +++V V +IDMYAK
Sbjct: 193 KRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLDSNVQVCNVVIDMYAK 252
Query: 121 CSCVVNARQVFDK----------------------------ILER------DPSEATLVT 146
C + A VF+ + E+ P + +
Sbjct: 253 CGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLA 312
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V+ A + G +L + E N+K ++VD+ + G +K A ++ L
Sbjct: 313 VLCACNHAGLVEDGLKLFNSMTQRGLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPFPN 372
Query: 207 VVSWNAMITGYAMHG 221
+V W ++ +G
Sbjct: 373 MVLWQTLLGACRTYG 387
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 212/544 (38%), Positives = 296/544 (54%), Gaps = 39/544 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF L+ +Y++ + A +F R+ R+ W +I Y NG + A+E+Y
Sbjct: 320 GFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVY 379
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + PD+ T AL AC+ L +++ G ++HE + + + V A+++MYAK
Sbjct: 380 ALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKS 439
Query: 122 SCVVNARQVFDKILERD--------------------------------PSEATLVTVIS 149
+ A +VF + E+D P+ T + ++
Sbjct: 440 KRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLADVKPNSVTFIAALA 499
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A A AL G+E+H R E + AL+D+Y KCG A F K VVS
Sbjct: 500 ACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVS 559
Query: 210 WNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WN MI G+ HGH AL F +M K PD +TFV +L ACSRGG+ EG F SM
Sbjct: 560 WNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMT 619
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
Y I P+++HY CMVDLL +G+L EA + I +M + PD VWGALLN C++H HV+L
Sbjct: 620 EKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELG 679
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNK 388
ELA + ++ LEP+DAG +V+L ++YA A W+ +A++RK M ++G+ CSW+EVK
Sbjct: 680 ELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREKGLDHDSGCSWVEVKGV 739
Query: 389 AHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDE--KANMICCHSE 446
HAFL+ D SHP EI L+ + RMK +GY P V DE K ++ C HSE
Sbjct: 740 VHAFLTDDESHPQIREINTVLEGIYERMKASGYAP----VESHCPEDEVLKDDIFCGHSE 795
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
RLA+AFGLINT GT + +TKN C CH +K IS I R+I VRD + HHFKDG C
Sbjct: 796 RLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISNIVRRDIIVRDSKQLHHFKDGSC 855
Query: 507 SCGD 510
SCGD
Sbjct: 856 SCGD 859
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 166/326 (50%), Gaps = 36/326 (11%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+A ++F ++P+R++F WNV++ Y +G + A++LY+R++ G+ PD +TFP L++C
Sbjct: 141 HAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCG 200
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL--------- 135
+ GR +H V+R + +V V AL+ MYAKC V+ AR+VFD +
Sbjct: 201 GVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNA 260
Query: 136 ------------------------ERDPSEATLVTVISASADIAALPQGRELHGFSWRHR 171
E P+ T+ +V AS ++ + +E+HG + +
Sbjct: 261 MIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRG 320
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
F +V +L+ MYA G+++ AR +F ++ + ++W AMI+GY +G KAL+++
Sbjct: 321 FAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYA 380
Query: 232 KMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
M+ + V PD IT L+AC+ G D G E + + ++++ S
Sbjct: 381 LMEVNNVSPDDITIASALAACACLGSLDVGVKLHE-LAESKGFISYIVVTNAILEMYAKS 439
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALL 316
R+D+A ++ M K D W +++
Sbjct: 440 KRIDKAIEVFKCMHEK-DVVSWSSMI 464
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 124/277 (44%), Gaps = 33/277 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG + L+ +Y+ C + A ++FD + + WN +I + NG +EL+
Sbjct: 219 GFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELF 278
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+L + P+ T A LS + + +H ++ + DV +LI MYA
Sbjct: 279 LTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASL 338
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ AR VF ++ RD P + T+ + +
Sbjct: 339 GMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASAL 398
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A A + +L G +LH + F + V A+++MYAK + A +F+ + EK VV
Sbjct: 399 AACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVV 458
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFV 245
SW++MI G+ + + +AL F M +V+P+ +TF+
Sbjct: 459 SWSSMIAGFCFNHRNFEALYYFRHMLADVKPNSVTFI 495
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 169 RHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALD 228
RH + +++ A++ M + G A +F ++ E+ V SWN M+ GY G +ALD
Sbjct: 117 RHAW-FGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALD 175
Query: 229 LFEKMK-DEVQPDHITFVGVLSACSRGGLFD 258
L+ +M V+PD TF VL +C GG+ D
Sbjct: 176 LYHRMMWAGVRPDVYTFPCVLRSC--GGVPD 204
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 199/540 (36%), Positives = 305/540 (56%), Gaps = 42/540 (7%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGP--YEVAIELYYRLLE 66
++ LV +Y+ L +A +LF +PQRN+ W ++ A A N P + A+ +
Sbjct: 109 VSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALA-NAPGRKKEALRFLVEMRR 167
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
G+ +++TF L AC + +H D+I+ ++DVFV ++LID Y K + +
Sbjct: 168 DGVAANSYTFSSVLGACGTPGVLAA---MHADIIKVGLDSDVFVRSSLIDAYMKLGDLDS 224
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISASAD 153
R VFD+++ D ++ TL +V+ A
Sbjct: 225 GRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTG 284
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+ L GR++H + ++ ++ + AL+DMY KCG + A LF ++ ++ V+SW+ M
Sbjct: 285 MVMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTM 342
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I+G A +G S +AL +F+ MK E P++IT VGVL ACS GL ++G +F SM + +
Sbjct: 343 ISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFG 402
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I P +H CMVDLLG +G+LDEA I +M+ +PD +W LL +C++H + LA A
Sbjct: 403 IQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNATLASYAA 462
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
++++LEP D G ++LSNIYA W K K M D+G+KK SWIE+ H F
Sbjct: 463 TEILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKKEPGRSWIELGKLVHVF 522
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
++G+ SHP D I +L L R K+ GYVP TE V D+ ++K +++ HSE+LAIAF
Sbjct: 523 IAGELSHPCSDRIVQELNRLIRRAKDLGYVPQTEFVLQDLGTEQKEDLLKYHSEKLAIAF 582
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
G +N+ +G + I KNL+IC DCH K +SK + I +RD R+HHF+ G+CSCGDYW
Sbjct: 583 GTMNSMEGKPVRIMKNLRICGDCHAFAKLVSKTEGKAIIIRDPVRFHHFQHGVCSCGDYW 642
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+L L+ +Y C CL +A LF R+ R++ W+ +I A NG A++++ +
Sbjct: 306 ILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAE 365
Query: 68 GLVPDNFTFPFALKACSALSAIEEG 92
G P+N T L ACS +E+G
Sbjct: 366 GPTPNNITMVGVLFACSHAGLVEDG 390
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 201/554 (36%), Positives = 305/554 (55%), Gaps = 69/554 (12%)
Query: 28 QLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALS 87
++ + + RN FLW +IR Y G ++ AI +Y + + + P +FTF LKAC ++
Sbjct: 105 RVIEPVQFRNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMG 164
Query: 88 AIEEGRRIHEDVIRNKWETDVFVGAALIDM------------------------------ 117
+ GR+ H R + V+VG +IDM
Sbjct: 165 DLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIA 224
Query: 118 -YAKCSCVVNARQVFDKILERD----------------PSEA-----------------T 143
YA+ + +A +F+ + +D P EA T
Sbjct: 225 AYARVGNMESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVT 284
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELN--VKVKTALVDMYAKCGLVKVARNLFEQ 201
+ ISA A + A + + + + V + +AL+DMY+KCG V+ A N+F
Sbjct: 285 VAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVS 344
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDE 259
+ K V S+++MI G A HG + +ALDLF M + ++P+ +TFVG L+ACS GL D+
Sbjct: 345 MNNKNVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQ 404
Query: 260 GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC 319
GR F SM + + ++P+ HYTCMVDLLG +GRL EA +LI M V+P GVWGALL +C
Sbjct: 405 GRQVFASMYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWGALLGAC 464
Query: 320 KLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIA 379
++H + +AE+A E L ELEP GNY++LSN+Y+ A +W GV +RKL+ ++G+KK+ A
Sbjct: 465 RIHNNPDIAEIAAEHLFELEPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEKGLKKTPA 524
Query: 380 CSWIEVKN-KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKA 438
SW+ KN + H F G+ +HP +I KL+ L R+ GY P SV +DV ++ K
Sbjct: 525 VSWVVDKNGQMHKFFPGNLNHPMSKKIQDKLEELVERLTALGYQPDLSSVPYDVSDNAKR 584
Query: 439 NMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRY 498
++ H+E+LA+AF L+ T + I KNL++C DCH+ ++ S++T R I +RD R+
Sbjct: 585 LILIQHTEKLALAFSLLTTNRDYTIKIMKNLRMCQDCHMFMRLASEVTGRVIIMRDNMRF 644
Query: 499 HHFKDGICSCGDYW 512
HHF+ G CSCGD+W
Sbjct: 645 HHFRSGACSCGDFW 658
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Query: 141 EATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLV--KVARNL 198
E + ++IS D L Q +++HG R + + + T L+ K G+ R +
Sbjct: 47 ELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRV 106
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLF 257
E ++ + W A+I GY + G +A+ ++ M K+E+ P TF +L AC G
Sbjct: 107 IEPVQFRNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDL 166
Query: 258 DEGRMFFESMVR 269
+ GR F R
Sbjct: 167 NLGRQFHAQTFR 178
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY-YRL 64
H V+ + L+ +YS C + A +F + +N+F ++ +I A +G + A++L+ Y +
Sbjct: 318 HVVIGSALIDMYSKCGNVEEAVNVFVSMNNKNVFSYSSMILGLATHGRAQEALDLFHYMV 377
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRI 95
+ + P+ TF AL ACS +++GR++
Sbjct: 378 TQTAIKPNTVTFVGALTACSHSGLVDQGRQV 408
>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 197/535 (36%), Positives = 300/535 (56%), Gaps = 37/535 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
+VH Y + +A +LF ++P++N+ W +I N A+ L+ +L +
Sbjct: 165 MVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKST 224
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+ TF + AC+ A G ++H +I++ + + +V A+LI +YA C ++R+VF
Sbjct: 225 SRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFG 284
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
+++ P+++T + +++ + + L
Sbjct: 285 EMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDW 344
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G+E+HG + + V +LV MY+ G V A ++F ++ +K +VSWN++I G A
Sbjct: 345 GKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQ 404
Query: 220 HGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY-HIDPSV 277
HG A +F +M + +PD ITF G+LSACS G +GR F + HID +
Sbjct: 405 HGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKI 464
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
QHYTCMVD+LG G L EA LI M VKP+ VW ALL++C++H V E A +
Sbjct: 465 QHYTCMVDILGRCGELKEAEKLIESMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFN 524
Query: 338 LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDA 397
L+ + YV+LSNIYA A W V+KLR M +GI K SW+ ++ K H F SGD
Sbjct: 525 LDSKSSAAYVLLSNIYASAGRWSSVSKLRVKMKQKGIMKKPGSSWVVIRGKKHEFFSGD- 583
Query: 398 SHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINT 457
P+C I+ KL++L ++KE GYVP S HDVE+++K M+ HSERLAIAFGLINT
Sbjct: 584 -RPHCLRIFEKLEFLREKLKELGYVPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINT 642
Query: 458 PDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+G+ + + KNL++C+DCH IK IS++ +I +RD R+HHFK+G+CSCGDYW
Sbjct: 643 VEGSTVTVMKNLRVCEDCHTVIKLISRVVGCKIVLRDPTRFHHFKNGMCSCGDYW 697
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 143/319 (44%), Gaps = 17/319 (5%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + + L+ LY+ C ++ ++F + + +W L+ Y+ N +E A+ ++
Sbjct: 255 GFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVF 314
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ ++P+ TF L +CSAL ++ G+ IH ++ T FVG +L+ MY+
Sbjct: 315 SEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDS 374
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
V +A VF +I ++ S + ++I A + G R E + T
Sbjct: 375 GNVNDAVSVFIEIFKK--SIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTG 432
Query: 182 LVDMYAKCGLVKVARNLFEQLR------EKRVVSWNAMITGYAMHGHSTKALDLFEKMKD 235
L+ + CG ++ R LF + ++++ + M+ G +A L E M
Sbjct: 433 LLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDILGRCGELKEAEKLIESMV- 491
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDP-SVQHYTCMVDLLGHSGRLD 294
V+P+ + ++ +LSAC D G ++ +++D S Y + ++ +GR
Sbjct: 492 -VKPNEMVWLALLSACRMHSDVDRGE---KAAAAIFNLDSKSSAAYVLLSNIYASAGRWS 547
Query: 295 EACDLIMQMRVK---PDPG 310
L ++M+ K PG
Sbjct: 548 SVSKLRVKMKQKGIMKKPG 566
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 113/247 (45%), Gaps = 19/247 (7%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G G + LV +YS +++A +F I ++++ WN +I A +G + A +
Sbjct: 355 LGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVI 414
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR--NKWETDVFVGAALIDMY 118
+ +++ + PD TF L ACS +++GR++ + N + + ++D+
Sbjct: 415 FGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDIL 474
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
+C + A ++ + ++ + P+E + ++SA + + +G + F L+ K
Sbjct: 475 GRCGELKEAEKLIESMVVK-PNEMVWLALLSACRMHSDVDRGEKAAA----AIFNLDSKS 529
Query: 179 KTALV---DMYAKCGLVKVARNLFEQLREKRVV-----SWNAMITGYA---MHGHSTKAL 227
A V ++YA G L ++++K ++ SW +I G G L
Sbjct: 530 SAAYVLLSNIYASAGRWSSVSKLRVKMKQKGIMKKPGSSW-VVIRGKKHEFFSGDRPHCL 588
Query: 228 DLFEKMK 234
+FEK++
Sbjct: 589 RIFEKLE 595
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 14/173 (8%)
Query: 114 LIDMYAKCSCVVNARQVFDKILERDP-SEATLVTVISASADI-AALPQGRELHGFSWRHR 171
+I Y + + +V+A +FD++ RD S ++++ DI A+ E+
Sbjct: 72 MISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMFDEMP------- 124
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
E +V TA+V+ + G+V A LF Q+ K + +WNAM+ GY G AL LF+
Sbjct: 125 -ERSVVSWTAMVNGCFRFGMVDQAERLFCQMPVKDIAAWNAMVHGYLQFGKVDDALKLFK 183
Query: 232 KMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMV 284
+M + T + L R G E F++M+R I + + +TC++
Sbjct: 184 QMPRKNVISWTTMICGLDQNERSG---EALNLFKNMLR-CCIKSTSRTFTCVI 232
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 206/572 (36%), Positives = 304/572 (53%), Gaps = 77/572 (13%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P +A+ L+ LY+ C A ++F+ + RN W VLI + ++EL+ ++
Sbjct: 295 PYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRA 354
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS---- 122
+ D F + C + GR++H +++ + V +LI +YAKC
Sbjct: 355 ELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQN 414
Query: 123 ---------------------------CVVNARQVFDKILERD----------------- 138
++ AR+ FD + R+
Sbjct: 415 AEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAE 474
Query: 139 -----------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
P T VT+ ADI A G ++ G + + LNV V A
Sbjct: 475 EDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANA 534
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPD 240
+ MY+KCG + A+ LF+ L K VVSWNAMITGY+ HG +A F+ M + +PD
Sbjct: 535 AITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPD 594
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
+I++V VLS CS GL EG+++F+ M R + I P ++H++CMVDLLG +G L EA DLI
Sbjct: 595 YISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLI 654
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
+M +KP VWGALL++CK+HG+ +LAELA + + EL+ D+G+Y++L+ IY+ A +
Sbjct: 655 DKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSD 714
Query: 361 GVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAG 420
A++RKLM D+GIKK+ SW+EV+NK H F + D SHP I K+ L ++ G
Sbjct: 715 DSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLG 774
Query: 421 YVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIK 480
YV TES ++ HSE+LA+AFG+++ P + I KNL+IC DCH IK
Sbjct: 775 YVR-TESPRSEIH----------HSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIK 823
Query: 481 FISKITEREITVRDVNRYHHFKDGICSCGDYW 512
IS +T+RE +RD R+HHFK G CSCGDYW
Sbjct: 824 LISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 855
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 144/300 (48%), Gaps = 36/300 (12%)
Query: 17 YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTF 76
Y+ + +A + F+ + +R++ WN++I A + +G A+ L + G+ D+ T+
Sbjct: 204 YAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTY 263
Query: 77 PFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILE 136
+L AC+ L ++ G+++H VIR+ + D +V +ALI++YAKC A++VF+ + +
Sbjct: 264 TSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQD 323
Query: 137 RDPSEAT---------------------------------LVTVISASADIAALPQGREL 163
R+ T L T+IS + L GR+L
Sbjct: 324 RNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQL 383
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
H + + V +L+ +YAKCG ++ A +F + E+ +VSW +MIT Y+ G+
Sbjct: 384 HSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNI 443
Query: 224 TKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
KA + F+ M + IT+ +L A + G ++G + +M+ + P Y +
Sbjct: 444 IKAREFFDGMATR---NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 500
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 124/293 (42%), Gaps = 46/293 (15%)
Query: 45 IRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW 104
+R+ G A L+ RL+ +GL F L A + A+ + RR+ I+
Sbjct: 27 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIK--- 83
Query: 105 ETDVFVGAALIDMYAKCSCVVNARQVFDKILERD-PSEATLVTVISASAD-------IAA 156
E +V +++ YAK + +A ++FD++ RD S TL++ S A +
Sbjct: 84 EPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGC 143
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR------------- 203
+L G W+ F + V+TALVDM+ +CG V A LF Q+
Sbjct: 144 RELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAG 203
Query: 204 ------------------EKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITF 244
E+ VVSWN MI + G +AL L +M + V+ D T+
Sbjct: 204 YAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTY 263
Query: 245 VGVLSACSRGGLFDEGRMFFESMVRDY-HIDPSVQHYTCMVDLLGHSGRLDEA 296
L+AC+R G+ ++R IDP V + +++L G EA
Sbjct: 264 TSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVA--SALIELYAKCGSFKEA 314
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 196/484 (40%), Positives = 286/484 (59%), Gaps = 42/484 (8%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF + L +VHLY++C + A LF+++PQR++ WN++I G +E A +L
Sbjct: 157 VGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDL 216
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ R+ E RN V ++I Y +
Sbjct: 217 FSRMPE----------------------------------RN-----VRSWTSMIAGYVQ 237
Query: 121 CSCVVNARQVFDKILERDP--SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
C A +F K+ E +E T+V V++A AD+ AL G +H +S RH F+ NV++
Sbjct: 238 CGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRI 297
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EV 237
L+DMY KCG ++ A +FE++ E+ VVSW+AMI G AMHG + +AL LF M +
Sbjct: 298 SNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGI 357
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
+P+ +TF+G+L ACS GL EGR FF SM RDY I P ++HY CMVDLL +G L EA
Sbjct: 358 EPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAH 417
Query: 298 DLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAA 357
+ I+ M +KP+ VWGALL +C++H +V++AE A++ L+EL+P + G YV+LSNIYA A
Sbjct: 418 EFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAG 477
Query: 358 NWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMK 417
WE A++RK M DR +KK+ S I V H F++G+ SHP+ ++I+ + + L M+
Sbjct: 478 RWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMR 537
Query: 418 EAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHI 477
GYVP T V D+E EK + HSE+LA+ FGL+NTP T + I KNL+IC+DCH
Sbjct: 538 LKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHS 597
Query: 478 AIKF 481
A +
Sbjct: 598 AFQI 601
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 153/338 (45%), Gaps = 41/338 (12%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
N +Q+ PQ + L L+R + N P+E+ +++ ++++ C+
Sbjct: 15 NRNQIHHVKPQSSETLKIDLLRNF--NSPFELR-QVHAQIIKTNAPLSILPLTRVGLVCA 71
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD--PSEA 142
+ ++I E V + K ET FV + + A+ ++A +F ++ + D P
Sbjct: 72 FTPSFHYAQQIFECVEKQKPET--FVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTF 129
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T +V+ A ++ L GR LHG + F N+ ++ +V +YA CG + AR LFE++
Sbjct: 130 TCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKM 189
Query: 203 REKRVVSWN-------------------------------AMITGYAMHGHSTKALDLFE 231
++ VV+WN +MI GY G + +A+ LF
Sbjct: 190 PQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFA 249
Query: 232 KMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
KM++ V+ + +T V VL+AC+ G D G E R + +V+ ++D+
Sbjct: 250 KMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNR-HGFKRNVRISNTLIDMYVKC 308
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
G L+EAC + +M + W A++ +HG + A
Sbjct: 309 GCLEEACKVFEEMEERTVVS-WSAMIGGLAMHGRAEEA 345
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 207/572 (36%), Positives = 304/572 (53%), Gaps = 77/572 (13%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P +A+ L+ LY+ C A ++F+ + RN W VLI + ++EL+ ++
Sbjct: 305 PYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRA 364
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS---- 122
+ D F + C + GR++H +++ + V +LI +YAKC
Sbjct: 365 ELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQN 424
Query: 123 ---------------------------CVVNARQVFDKILERD----------------- 138
++ AR+ FD + R+
Sbjct: 425 AEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAE 484
Query: 139 -----------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
P T VT+ ADI A G ++ G + + LNV V A
Sbjct: 485 EDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANA 544
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPD 240
+ MY+KCG + A+ LF+ L K VVSWNAMITGY+ HG +A F+ M + +PD
Sbjct: 545 AITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPD 604
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
+I++V VLS CS GL EG+++F+ M R + I P ++H++CMVDLLG +G L EA DLI
Sbjct: 605 YISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLI 664
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
+M +KP VWGALL++CK+HG+ +LAELA + + EL+ D+G+Y++L+ IY+ A +
Sbjct: 665 DKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSD 724
Query: 361 GVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAG 420
A++RKLM D+GIKK+ SW+EV+NK H F + D SHP I KL L ++ G
Sbjct: 725 DSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLG 784
Query: 421 YVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIK 480
YV TES ++ HSE+LA+AFG+++ P + I KNL+IC DCH IK
Sbjct: 785 YVR-TESPRSEIH----------HSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIK 833
Query: 481 FISKITEREITVRDVNRYHHFKDGICSCGDYW 512
IS +T+RE +RD R+HHFK G CSCGDYW
Sbjct: 834 LISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 144/300 (48%), Gaps = 36/300 (12%)
Query: 17 YSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTF 76
Y+ + +A + F+ + +R++ WN++I A + +G A+ L + G+ D+ T+
Sbjct: 214 YAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTY 273
Query: 77 PFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILE 136
+L AC+ L ++ G+++H VIR+ + D +V +ALI++YAKC A++VF+ + +
Sbjct: 274 TSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQD 333
Query: 137 RDPSEAT---------------------------------LVTVISASADIAALPQGREL 163
R+ T L T+IS + L GR+L
Sbjct: 334 RNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQL 393
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
H + + V +L+ +YAKCG ++ A +F + E+ +VSW +MIT Y+ G+
Sbjct: 394 HSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNI 453
Query: 224 TKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCM 283
KA + F+ M + IT+ +L A + G ++G + +M+ + P Y +
Sbjct: 454 IKAREFFDGMDTR---NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 510
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 127/291 (43%), Gaps = 50/291 (17%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG-LVP 71
+++ Y+ L +A +LFDR+P+R++ WN L+ Y + +E + + G +P
Sbjct: 77 MMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLP 136
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVF----VGAALIDMYAKCSCVVNA 127
+ FTF +K+C AL R + ++ W+ D + V AL+DM+ +C V A
Sbjct: 137 NAFTFCCVMKSCGALGC----RELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFA 192
Query: 128 RQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYA 187
++F +I ER + + +++ YA
Sbjct: 193 SRLFSQI-ERP------------------------------------TIFCRNSMLAGYA 215
Query: 188 KCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVG 246
K + A FE + E+ VVSWN MI + G +AL L +M + V+ D T+
Sbjct: 216 KLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTS 275
Query: 247 VLSACSRGGLFDEGRMFFESMVRDY-HIDPSVQHYTCMVDLLGHSGRLDEA 296
L+AC+R G+ ++R IDP V + +++L G EA
Sbjct: 276 SLTACARLFSLGWGKQLHAKVIRSLPQIDPYVA--SALIELYAKCGSFKEA 324
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 207/576 (35%), Positives = 329/576 (57%), Gaps = 68/576 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEVAIE 59
GFG L +VH+YSAC + A ++F+ IP QR++ WN LI + NG E A+
Sbjct: 195 GFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALR 254
Query: 60 LYYRLLEIG---LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWE----TDVFVGA 112
+ ++ G + P+ T LK+C+ L +E +HE + DV V
Sbjct: 255 TFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLT 314
Query: 113 ALIDMYAKCSCVVNARQVFDKI-------------------------------------- 134
AL+DM+A+C + AR++FD +
Sbjct: 315 ALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMV 374
Query: 135 -LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVK 193
+E P+ TLV+VI+A + + A +H ++ + + ++ +AL+DM AKCG ++
Sbjct: 375 GVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIE 434
Query: 194 VARNLFEQLRE--KRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSA 250
R +F ++ E + VVSW++MI +HG +AL+LF +M+ +P+ IT++ VLSA
Sbjct: 435 HGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSA 494
Query: 251 CSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPG 310
CS GL ++G+ F SM +DY + P+ +HY C+VDLLG +G LDEA ++I+ M +K D
Sbjct: 495 CSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLA 554
Query: 311 VWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMI 370
+WG+LL +C LHG+ KL E+ +K++ L+ + G++V+L+N+Y A W+ V ++R +
Sbjct: 555 LWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELR 614
Query: 371 DRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAG-YVPGTESVF 429
G++K S+IE+ N+ ++F++ D SHP + IY +L L+ R+++A YV TE+
Sbjct: 615 RSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYV--TETGL 672
Query: 430 HDVENDEKANMIC-C--HSERLAIAFGLI----------NTPDGTRLLITKNLKICDDCH 476
+VE+ + A +I C HSERLAIAFGLI + T + ITKNL++C DCH
Sbjct: 673 -NVEDGDIAGLILRCKYHSERLAIAFGLIMIDRHSTCSCSLRTATPIRITKNLRVCRDCH 731
Query: 477 IAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
K +SK+ +RE+ VRD +R+HHF+DG CSCGDYW
Sbjct: 732 AYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 52/277 (18%)
Query: 33 IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
I ++ F WN LI A P + A+ + R+ + +NFTFP LKAC+AL +
Sbjct: 13 ISHKDTFHWNSLIAKNATQNP-QTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71
Query: 93 RRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER--------------- 137
++H + R D F AAL+D Y KC A QVFD++ E
Sbjct: 72 LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131
Query: 138 ---------------------DPSEATLVTVISASADIAA---------LPQGRELHGFS 167
D SE V V+S A ++A L +G +HG
Sbjct: 132 SNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLV 191
Query: 168 WRHRFELNVKVKTALVDMYAKCGLVKVARNLFE--QLREKRVVSWNAMITGYAMHGHSTK 225
++ F ++ + ++V MY+ C V A +F + ++ VVSWN++I+G+ ++G + +
Sbjct: 192 VKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAER 251
Query: 226 ALDLFEKMKDE----VQPDHITFVGVLSACSRGGLFD 258
AL FE M E V+P+ +T + +L +C+ G +
Sbjct: 252 ALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVE 288
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 210/552 (38%), Positives = 304/552 (55%), Gaps = 40/552 (7%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNG-PYEVAIE 59
+G + ++ L+ LY+ L+ ++F +P+ + WN +I A A + A+
Sbjct: 444 LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVV 503
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
+ G + TF L A S+LS E G++IH ++N + ALI Y
Sbjct: 504 CFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYG 563
Query: 120 KCSCVVNARQVFDKILERDPS----------------------------------EATLV 145
KC + ++F ++ ER +
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYA 623
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
TV+SA A +A L +G E+H S R E +V V +ALVDMY+KCG + A F + +
Sbjct: 624 TVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR 683
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ--PDHITFVGVLSACSRGGLFDEGRMF 263
SWN+MI+GYA HG +AL LFE MK + Q PDH+TFVGVLSACS GL +EG
Sbjct: 684 NSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKH 743
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC-KLH 322
FESM Y + P ++H++CM D+LG +G LD+ D I +M +KP+ +W +L +C + +
Sbjct: 744 FESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRAN 803
Query: 323 GH-VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
G +L + A E L +LEP +A NYV+L N+YA WE + K RK M D +KK S
Sbjct: 804 GRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYS 863
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMI 441
W+ +K+ H F++GD SHP+ D IY KLK L +M++AGYVP T +D+E + K ++
Sbjct: 864 WVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEIL 923
Query: 442 CCHSERLAIAFGLINTPDGT-RLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHH 500
HSE+LA+AF L T + I KNL++C DCH A K+ISKI R+I +RD NR+HH
Sbjct: 924 SYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHH 983
Query: 501 FKDGICSCGDYW 512
F+DG CSC D+W
Sbjct: 984 FQDGACSCSDFW 995
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 174/388 (44%), Gaps = 43/388 (11%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
F + LV++Y+ C + +A ++F + ++ WN +I NG + A+E Y +
Sbjct: 347 FMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM 406
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
++P +FT +L +C++L + G++IH + ++ + +V V AL+ +YA+ +
Sbjct: 407 RRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYL 466
Query: 125 VNARQVFDKILERDPSEATLVTVISASADIA-ALPQ------------------------ 159
R++F + E D + + ++I A A +LP+
Sbjct: 467 NECRKIFSSMPEHD--QVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVL 524
Query: 160 -----------GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR-V 207
G+++HG + ++ + AL+ Y KCG + +F ++ E+R
Sbjct: 525 SAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDN 584
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFES 266
V+WN+MI+GY + KALDL M Q D + VLSA + + G
Sbjct: 585 VTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHAC 644
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVK 326
VR ++ V + +VD+ GRLD A M V+ + W ++++ HG +
Sbjct: 645 SVRAC-LESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYARHGQGE 702
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYA 354
A L L + ++L+ ++V + +
Sbjct: 703 EA-LKLFETMKLDGQTPPDHVTFVGVLS 729
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 158/362 (43%), Gaps = 48/362 (13%)
Query: 1 MGFGFHPVLATKLVHLYSAC-DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIE 59
+ + V++ L+ +Y C + A F I +N WN +I Y+ G A
Sbjct: 133 LSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFR 192
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVI----RNKWETDVFVGAALI 115
++ + G P +TF + +A S E R+ E ++ ++ TD+FVG+ L+
Sbjct: 193 IFSSMQYDGSRPTEYTFGSLVT--TACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLV 250
Query: 116 DMYAKCSCVVNARQVFDKILER--------------------------------DPSEAT 143
+AK + AR+VF+++ R D S +
Sbjct: 251 SAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPES 310
Query: 144 LVTVISAS-----ADIAALPQGRELHGFSWRHRF-ELNVKVKTALVDMYAKCGLVKVARN 197
V ++S+ A+ L +GRE+HG + V + LV+MYAKCG + AR
Sbjct: 311 YVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARR 370
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGL 256
+F + +K VSWN+MITG +G +A++ ++ M+ ++ P T + LS+C+
Sbjct: 371 VFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKW 430
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
G+ ++ ID +V ++ L +G L+E C I + D W +++
Sbjct: 431 AKLGQQIHGESLK-LGIDLNVSVSNALMTLYAETGYLNE-CRKIFSSMPEHDQVSWNSII 488
Query: 317 NS 318
+
Sbjct: 489 GA 490
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 151/349 (43%), Gaps = 41/349 (11%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE-I 67
+ + LV ++ L A ++F+++ RN N L+ E A +L+ + I
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMI 304
Query: 68 GLVPDNFTF---PFALKACSALSAIEEGRRIHEDVIRNKW-ETDVFVGAALIDMYAKCSC 123
+ P+++ F + + +++GR +H VI + V +G L++MYAKC
Sbjct: 305 DVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS 364
Query: 124 VVNARQVFDKILERD---------------------------------PSEATLVTVISA 150
+ +AR+VF + ++D P TL++ +S+
Sbjct: 365 IADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSS 424
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
A + G+++HG S + +LNV V AL+ +YA+ G + R +F + E VSW
Sbjct: 425 CASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSW 484
Query: 211 NAMITGYAMHGHS-TKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMV 268
N++I A S +A+ F + Q + ITF VLSA S + G+ +
Sbjct: 485 NSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLAL 544
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
++ D + ++ G G +D + +M + D W ++++
Sbjct: 545 KNNIADEATTE-NALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMIS 592
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 93/449 (20%), Positives = 183/449 (40%), Gaps = 58/449 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L++ Y +A ++FD +P RN W ++ Y+ NG ++ A+ +++ G
Sbjct: 38 LCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEG 97
Query: 69 LVPDNFTFPFALKACSALSA--IEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV- 125
+ + + F L+AC + + I GR+IH + + + D V LI MY KC V
Sbjct: 98 IFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVG 157
Query: 126 -------------------------------NARQVFDKILERD---PSEATLVTVISAS 151
+A ++F ++ D P+E T ++++ +
Sbjct: 158 YALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSS-MQYDGSRPTEYTFGSLVTTA 216
Query: 152 ADIAALPQGRELHGFS---WRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+ P R L + ++ V + LV +AK G + AR +F Q+ + V
Sbjct: 217 CSLTE-PDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAV 275
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDE-----GRMF 263
+ N ++ G +A LF M + ++V +LS+ L +E GR
Sbjct: 276 TLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREV 335
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
++ +D V +V++ G + +A + M K D W +++ +G
Sbjct: 336 HGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK-DSVSWNSMITGLDQNG 394
Query: 324 HVKLAELALEKLIELEPHD--AGNYVILSNIYARAA-NWEGVAKLRKLMIDRGIKKSIAC 380
A+E+ + HD G++ ++S++ + A+ W AKL + + +K I
Sbjct: 395 CFI---EAVERYKSMRRHDILPGSFTLISSLSSCASLKW---AKLGQQIHGESLKLGIDL 448
Query: 381 SWIEVKNKAHAFLSGDASHPNCDEIYAKL 409
+ + V N + C +I++ +
Sbjct: 449 N-VSVSNALMTLYAETGYLNECRKIFSSM 476
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 161 RELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMH 220
R H +++R + +V + L++ Y + G AR +F+++ + VSW +++GY+ +
Sbjct: 21 RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRN 80
Query: 221 GHSTKALDLFEKM-KDEVQPDHITFVGVLSAC----SRGGLFDEGRMFFESMVR-DYHID 274
G +AL M K+ + + FV VL AC S G LF GR M + Y +D
Sbjct: 81 GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILF--GRQIHGLMFKLSYAVD 138
Query: 275 PSVQH 279
V +
Sbjct: 139 AVVSN 143
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 201/550 (36%), Positives = 310/550 (56%), Gaps = 41/550 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWN-GPYEVAIEL 60
G ++ LV +Y C + + ++F+ + + + WN ++ A + P +++
Sbjct: 511 GLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKV 570
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ GL+P+ TF L A S LS +E G+++H V+++ D V ALI YAK
Sbjct: 571 FNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAK 630
Query: 121 CSCVVNARQVFDKILER-----------------DPSEA-----------------TLVT 146
+ + +F + +R + EA T
Sbjct: 631 SGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSI 690
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
+++A A +AAL +G ELH F R E +V V++ALVDMY+KCG V A LF + ++
Sbjct: 691 ILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRN 750
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFE 265
SWN+MI+GYA HG KA+++FE+M + PDH+TFV VLSACS GL + G +FE
Sbjct: 751 EFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFE 810
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH--- 322
M+ D+ I P ++HY+C++DLLG +G++D+ + I +M ++P+ +W +L +C+
Sbjct: 811 -MMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDG 869
Query: 323 GHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSW 382
++ L A L+E+EP + NYV+ SN +A WE AK R M KK SW
Sbjct: 870 SNIDLGREASRVLLEIEPQNPVNYVLASNFHAATGMWEDTAKARTAMRQATEKKEAGRSW 929
Query: 383 IEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMIC 442
+ + + H F++GD SHPN EIY KL +L ++ AGYVP TE +D+E + K ++
Sbjct: 930 VTLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQNIRNAGYVPLTEYALYDLEEENKEELLS 989
Query: 443 CHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFK 502
HSE+LAIAF L + G + I KNL++C DCHIA ++IS++ R+I +RD R+HHFK
Sbjct: 990 YHSEKLAIAFVLTRSSSGP-IRIMKNLRVCGDCHIAFRYISQMISRQIILRDSIRFHHFK 1048
Query: 503 DGICSCGDYW 512
DG CSCGDYW
Sbjct: 1049 DGKCSCGDYW 1058
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 184/407 (45%), Gaps = 39/407 (9%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
++ LV++Y+ C + +A ++F + + WN +I A NG E A+ Y + +
Sbjct: 417 VSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSC 476
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P NF +L +C+ L + G+++H D ++ + D V L+ MY +C + +
Sbjct: 477 ISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYW 536
Query: 129 QVFDKILERD----------------------------------PSEATLVTVISASADI 154
+VF+ + E D P++ T + +++A + +
Sbjct: 537 KVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPL 596
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR-VVSWNAM 213
+ L G+++H +H + V AL+ YAK G + +LF + ++R +SWN+M
Sbjct: 597 SVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSM 656
Query: 214 ITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I+GY +G+ +A+D M Q D TF +L+AC+ + G +R H
Sbjct: 657 ISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRS-H 715
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA-ELA 331
++ V + +VD+ GR+D A L M + + W ++++ HG + A E+
Sbjct: 716 LESDVVVESALVDMYSKCGRVDYASKLFNSM-TQRNEFSWNSMISGYARHGLGRKAIEIF 774
Query: 332 LEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
E L E D +V + + + A E + ++M D GI I
Sbjct: 775 EEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQI 821
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 162/376 (43%), Gaps = 50/376 (13%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G L LV+ Y+ L A Q+FD +P+RN W L+ Y +G E A ++
Sbjct: 91 GLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVF 150
Query: 62 YRLL---EIGLVPDNFTFPFALKACSALSAIEEG--RRIHEDVIRNKWETDVFVGAALID 116
+L + G P +FTF L+AC G ++H V + ++ ++ V ALI
Sbjct: 151 RAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALIS 210
Query: 117 MYAKCSC--VVNARQVFDKILERD-PSEATLVTVISASADIAA-------LPQG-RELHG 165
MY C+ + A++VFD RD + L++V + D+A+ + +G +
Sbjct: 211 MYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQL 270
Query: 166 FSWRHRF-----------------------------ELNVKVKTALVDMYAKCGLVKVAR 196
H F ++ V +ALV +A+ GL A+
Sbjct: 271 RPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAK 330
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGL 256
++F L++K V+ N +I G S +A+ +F ++ V + T+V +LSA + +
Sbjct: 331 DIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYVVLLSALAEYSI 390
Query: 257 FDE----GRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
+E GR+ M+R D + +V++ G ++ A I Q+ D W
Sbjct: 391 SEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASK-IFQLMEATDRISW 449
Query: 313 GALLNSCKLHGHVKLA 328
++++ +G+ + A
Sbjct: 450 NTIISALDQNGNCEEA 465
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 141/338 (41%), Gaps = 46/338 (13%)
Query: 3 FGFHPVLATKLVHLYSACDCLHN--AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+ + + L+ +Y +C A ++FD P R+L WN L+ YA G L
Sbjct: 198 YASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTL 257
Query: 61 YYRLL----EIGLVPDNFTFPFALKACSALSAIEEG-RRIHEDVIRNKWETDVFVGAALI 115
+ + I L P TF + A S S ++ V+++ +D++VG+AL+
Sbjct: 258 FKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALV 317
Query: 116 DMYAKCSCVVNARQVFDKILER--------------------------------DPSEAT 143
+A+ A+ +F + ++ D + T
Sbjct: 318 SAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADT 377
Query: 144 LVTVISASADIA----ALPQGRELHGFSWRHRF-ELNVKVKTALVDMYAKCGLVKVARNL 198
V ++SA A+ + L GR +HG R +L + V LV+MYAKCG ++ A +
Sbjct: 378 YVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKI 437
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLF 257
F+ + +SWN +I+ +G+ +A+ + M+ + P + + LS+C+ L
Sbjct: 438 FQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLL 497
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
G+ V+ + +D +V + G G + +
Sbjct: 498 TAGQQVHCDAVK-WGLDLDTSVSNVLVKMYGECGAMSD 534
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 45/200 (22%)
Query: 95 IHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD---------------- 138
+H ++I+ D+F+ L++ YAK + + A QVFD++ ER+
Sbjct: 83 LHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGI 142
Query: 139 --------------------PSEATLVTVISASADIAA--LPQGRELHGFSWRHRFELNV 176
P+ T T++ A D L ++HG + + N
Sbjct: 143 AEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNT 202
Query: 177 KVKTALVDMYAKC--GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
V AL+ MY C G +A+ +F+ + +++WNA+++ YA G LF+ M+
Sbjct: 203 TVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQ 262
Query: 235 D-----EVQPDHITFVGVLS 249
+++P TF +++
Sbjct: 263 RGDSRIQLRPTEHTFGSLIT 282
>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
Length = 706
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 199/545 (36%), Positives = 304/545 (55%), Gaps = 38/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF V T LV +YS C L + + F+ + + N WN +I A+A + A+
Sbjct: 166 GFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEALRTL 225
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ G+ + T+ + A S ++ R IH+ ++R ++ DV +++MY KC
Sbjct: 226 QKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQDVV--NVILNMYGKC 283
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
C+ +A +F + + D P + T V+VI
Sbjct: 284 GCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVI 343
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A A + + G+++H F++ ++ +LV+MY KCG++ VAR++F++ K V
Sbjct: 344 DACATLGDMEVGKQVHRRLGDRAFQVT-ELANSLVNMYGKCGILDVARSIFDKT-AKGSV 401
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+WNAMI YA H H +A +LF M+ D +P +ITF+ VLSAC+ GL +E +F M
Sbjct: 402 TWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAGLPEEAHSYFVCM 461
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+D+ + P HY CMV+ LG +GRL +A LI M +PD W + L +C+ HG +K
Sbjct: 462 QQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHGDMKR 521
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
+ A + I ++P + YV L+ I+A A +++ +++RKLM+DRGI+K+ S I++
Sbjct: 522 GKFAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGT 581
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ F +GD S+P EI+ +LK L+ MK AGY P V HDVE +K ++ HSER
Sbjct: 582 SVYEFTAGDQSNPRSKEIFDELKRLDKEMKRAGYDPDMTHVAHDVEAGQKEPLLFAHSER 641
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LAIAFG+I+T GT L I KNL++C DCH K SKIT REI VRD NR+HHFK+G CS
Sbjct: 642 LAIAFGIISTSQGTPLRIMKNLRVCGDCHAMTKLTSKITRREIIVRDSNRFHHFKNGSCS 701
Query: 508 CGDYW 512
C D+W
Sbjct: 702 CKDFW 706
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 188/395 (47%), Gaps = 47/395 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G G ++ LV +Y C L A +F+ P +N+F W +LI A +G + A+ L
Sbjct: 63 VGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALAL 122
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSA-IEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
+Y +L+ G+ P + +F A+ ACSA + GR +H + R ++ V +L+ MY+
Sbjct: 123 FYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYS 182
Query: 120 KCSCVVNARQVFDKILE----------------RDPSEA-----------------TLVT 146
KC + + + F+ + E R EA T +T
Sbjct: 183 KCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYIT 242
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++SA + L R +H R F+ + V +++MY KCG ++ A +F+ + +
Sbjct: 243 LMSAYDQPSQLKSARYIHDCILRTGFDQD--VVNVILNMYGKCGCLQDAEAMFKSMSQPD 300
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
V++WN MI Y+ HGH+++AL +E M++E V PD T+V V+ AC+ G + G+
Sbjct: 301 VIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHR 360
Query: 266 SMV-RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+ R + + + +V++ G G LD A + + W A++ + H H
Sbjct: 361 RLGDRAFQV---TELANSLVNMYGKCGILDVARSIF--DKTAKGSVTWNAMIGAYAQHSH 415
Query: 325 VKLA-ELALEKLIELEPHDAGNYVILSNIYARAAN 358
+ A EL L L+ L+ + +Y+ ++ + AN
Sbjct: 416 EQQAFELFL--LMRLDGEEP-SYITFMSVLSACAN 447
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 140/310 (45%), Gaps = 40/310 (12%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
+++C+ L A+ EGRRIH+ + R +DV+V L+ MY KC + AR VF+ ++
Sbjct: 41 IQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNV 100
Query: 139 --------------------------------PSEATLVTVISA-SADIAALPQGRELHG 165
P + I+A SA LP GR LH
Sbjct: 101 FSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHA 160
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
R+ F+ V T+LV MY+KCG ++ + FE + E VSWNAMI +A H +
Sbjct: 161 LLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLE 220
Query: 226 ALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMV 284
AL +KM E ++ +T++ ++SA + R + ++R D V ++
Sbjct: 221 ALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRT-GFDQDV--VNVIL 277
Query: 285 DLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAG 344
++ G G L +A + M +PD W ++ + HGH A L +L++ E
Sbjct: 278 NMYGKCGCLQDAEAMFKSMS-QPDVIAWNTMIAAYSQHGHTSEA-LRFYELMQEEGVVPD 335
Query: 345 NYVILSNIYA 354
+Y +S I A
Sbjct: 336 DYTYVSVIDA 345
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 13/270 (4%)
Query: 120 KCSCVVNARQVFDKIL--------ERDPSEATLVTVISASADIAALPQGRELHGFSWRHR 171
+ S +++ RQ +I +D V VI + A + AL +GR +H R
Sbjct: 5 RLSTLLSKRQQLGQIAAAIDALQKRKDADLKECVRVIQSCARLGALAEGRRIHQLIRRVG 64
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLF- 230
+V V LV MY KCG ++ AR +FE K V SW +IT A HG S +AL LF
Sbjct: 65 LGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALALFY 124
Query: 231 EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
E +K +QP ++F ++ACS G F +++R Y +V T +V +
Sbjct: 125 EMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKC 184
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGN--YVI 348
G L+E+ M + + W A++ + H A L+K+ LE A + Y+
Sbjct: 185 GSLEESVKTFESM-TELNAVSWNAMIAAFAEHRRGLEALRTLQKMF-LEGIRACSVTYIT 242
Query: 349 LSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
L + Y + + + + ++ G + +
Sbjct: 243 LMSAYDQPSQLKSARYIHDCILRTGFDQDV 272
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 207/576 (35%), Positives = 329/576 (57%), Gaps = 68/576 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEVAIE 59
GFG L +VH+YSAC + A ++F+ IP QR++ WN LI + NG E A+
Sbjct: 195 GFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALR 254
Query: 60 LYYRLLEIG---LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWE----TDVFVGA 112
+ ++ G + P+ T LK+C+ L +E +HE + DV V
Sbjct: 255 TFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLT 314
Query: 113 ALIDMYAKCSCVVNARQVFDKI-------------------------------------- 134
AL+DM+A+C + AR++FD +
Sbjct: 315 ALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMV 374
Query: 135 -LERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVK 193
+E P+ TLV+VI+A + + A +H ++ + + ++ +AL+DM AKCG ++
Sbjct: 375 GVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIE 434
Query: 194 VARNLFEQLRE--KRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSA 250
R +F ++ E + VVSW++MI +HG +AL+LF +M+ +P+ IT++ VLSA
Sbjct: 435 HGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSA 494
Query: 251 CSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPG 310
CS GL ++G+ F SM +DY + P+ +HY C+VDLLG +G LDEA ++I+ M +K D
Sbjct: 495 CSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLA 554
Query: 311 VWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMI 370
+WG+LL +C LHG+ KL E+ +K++ L+ + G++V+L+N+Y A W+ V ++R +
Sbjct: 555 LWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELR 614
Query: 371 DRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAG-YVPGTESVF 429
G++K S+IE+ N+ ++F++ D SHP + IY +L L+ R+++A YV TE+
Sbjct: 615 RSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYV--TETGL 672
Query: 430 HDVENDEKANMIC-C--HSERLAIAFGLI----------NTPDGTRLLITKNLKICDDCH 476
+VE+ + A +I C HSERLAIAFGLI + T + ITKNL++C DCH
Sbjct: 673 -NVEDGDIAGLIXRCKYHSERLAIAFGLIMIDRHSTCSCSLRTATPIRITKNLRVCRDCH 731
Query: 477 IAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
K +SK+ +RE+ VRD +R+HHF+DG CSCGDYW
Sbjct: 732 AYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 52/277 (18%)
Query: 33 IPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
I ++ F WN LI A P + A+ + R+ + +NFTFP LKAC+AL +
Sbjct: 13 ISHKDTFHWNSLIAKNATQNP-QTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71
Query: 93 RRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER--------------- 137
++H + R D F AAL+D Y KC A QVFD++ E
Sbjct: 72 LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131
Query: 138 ---------------------DPSEATLVTVISASADIAA---------LPQGRELHGFS 167
D SE V V+S A ++A L +G +HG
Sbjct: 132 SNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLV 191
Query: 168 WRHRFELNVKVKTALVDMYAKCGLVKVARNLFE--QLREKRVVSWNAMITGYAMHGHSTK 225
++ F ++ + ++V MY+ C V A +F + ++ VVSWN++I+G+ ++G + +
Sbjct: 192 VKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAER 251
Query: 226 ALDLFEKMKDE----VQPDHITFVGVLSACSRGGLFD 258
AL FE M E V+P+ +T + +L +C+ G +
Sbjct: 252 ALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVE 288
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 213/549 (38%), Positives = 300/549 (54%), Gaps = 48/549 (8%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++ T LV +Y + + A FD IP +N+ WN ++ AY NG A+EL+ +
Sbjct: 376 MVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQ 435
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNK-WETDVFVGAALIDMYAKCSCVVN 126
L P+ ++ L C +S E R IH +V+ N + + + ++ M+A+ +
Sbjct: 436 SLAPNKVSYLAVLGCCEDVS---EARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEE 492
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISASAD 153
A FD + +D P + TLV+V+ AD
Sbjct: 493 AVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCAD 552
Query: 154 IAALPQGRELHG-FSWRHRFELNVKVKTALVDMYAKCGL-VKVARNLFEQLREKR--VVS 209
+ L GR + S E +V V +A+++M AKCG V LF ++ + R +V+
Sbjct: 553 LGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVA 612
Query: 210 WNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGR--MFFE 265
WN MI YA HGH KAL LF M + V+PD TFV VLS CS GL ++G F
Sbjct: 613 WNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLA 672
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
V P V+HY C+VD+LG G L EA D I +M + D VW +LL +C +G +
Sbjct: 673 REVLGIEQQP-VEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDL 731
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI-ACSWIE 384
+ E A IEL D+ YV+LSNIYA A WE ++R+ M +R +KK + S I
Sbjct: 732 EGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRVPGKSSIV 791
Query: 385 VKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCH 444
VKN+ H F + D SHP D IYA+L+ L+G ++EAGYVP T V HDVE ++K ++ H
Sbjct: 792 VKNRVHEFFARDRSHPQSDAIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYH 851
Query: 445 SERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF-KD 503
SE+LAIAFGLI+ P + + KNL++C DCH A KFI+++T+REI VRD NR+HHF KD
Sbjct: 852 SEKLAIAFGLISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKD 911
Query: 504 GICSCGDYW 512
G CSCGDYW
Sbjct: 912 GECSCGDYW 920
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 172/399 (43%), Gaps = 55/399 (13%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + +L LV +YS C L +A+ F + R + WN LI A + P V +LY
Sbjct: 54 GLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQ--SSPAAV-FDLY 110
Query: 62 YRL-LE--IGLVPDNFTFPFALKACSA----------LSAIEEGRRIHEDVIRNKWETDV 108
R+ LE P+ T L A ++ +I + R +H+D+ + E D+
Sbjct: 111 TRMKLEERAENRPNKLTIIAVLGAIASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDL 170
Query: 109 FVGAALIDMYAKCSCVVNARQVFDKILERD------------------------------ 138
FV AL+D Y KC CV +A +VF +I D
Sbjct: 171 FVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWL 230
Query: 139 ----PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV 194
P+ A+ V ++S+ D ++LP R +H F +V V TALV MY +CG V
Sbjct: 231 EGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDE 290
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSR 253
+ +FE + + VSWNAMI +A GH + A ++ +M+ E +P+ ITFV L A
Sbjct: 291 SIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACS 350
Query: 254 GGLFDEGR-MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
D G + ++ V T +V + G +G +D A + K + W
Sbjct: 351 SSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAK-NIVSW 409
Query: 313 GALLNSCKLHGHVKLAE--LALEKLIELEPHDAGNYVIL 349
A+L + +G + A A K L P+ +L
Sbjct: 410 NAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVL 448
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 157/358 (43%), Gaps = 45/358 (12%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPY-EVAIELYYRLLEI 67
+AT L+ Y C C+ +A ++F RI +L WN I A A N + A+ L R+
Sbjct: 172 VATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLE 231
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
GL+P+ +F L +C S++ R IH V + DV V AL+ MY +C V +
Sbjct: 232 GLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDES 291
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
VF+ + R+ P++ T VT + A+
Sbjct: 292 IAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSS 351
Query: 155 AA--LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
++ L + LHG+ E +V V TALV MY G + AR F+ + K +VSWNA
Sbjct: 352 SSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNA 411
Query: 213 MITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
M+T Y +G + +A++LF MK + + P+ ++++ VL C E R +V +
Sbjct: 412 MLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED---VSEARSIHAEVVGNG 468
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW----GALLNSCKLHGHV 325
+V + SG L+EA VK D W AL LHG +
Sbjct: 469 LFAQESSIANGVVRMFARSGSLEEAVAAFDATVVK-DSVSWNTKVAALSAREDLHGAI 525
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 154/367 (41%), Gaps = 42/367 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF V+AT LV +Y C + + +F+ + RN WN +I A+A G A +
Sbjct: 266 LGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAI 325
Query: 61 YYRLLEIGLVPDNFTFPFALK-ACSALSA-IEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
Y+R+ + G P+ TF ALK ACS+ S + E +H + E DV VG AL+ MY
Sbjct: 326 YWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMY 385
Query: 119 AKCSCVVNARQVFDKILERD---------------------------------PSEATLV 145
+ AR FD I ++ P++ + +
Sbjct: 386 GSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYL 445
Query: 146 TVISASADIAALPQGRELHG-FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLRE 204
V+ D++ + R +H F + +V M+A+ G ++ A F+
Sbjct: 446 AVLGCCEDVS---EARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVV 502
Query: 205 KRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMF 263
K VSWN + + A+ F M+ E +PD T V V+ C+ G + GR
Sbjct: 503 KDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSI 562
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSG-RLDEACDLIMQM-RVKPDPGVWGALLNSCKL 321
+ + ++ V + +++++ G +DE L +M + D W ++ +
Sbjct: 563 QQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQ 622
Query: 322 HGHVKLA 328
HGH + A
Sbjct: 623 HGHGRKA 629
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 127/321 (39%), Gaps = 55/321 (17%)
Query: 49 AWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDV 108
+W GP Y +E T L+ C + + +GR++H +++ +
Sbjct: 8 SWPGPRSTKDHDDYIPIE--------TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARND 59
Query: 109 FVGAALIDMYAKCSCVVNARQVFDKILERD------------------------------ 138
+G L+ MY+KC + +A F + R
Sbjct: 60 LLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERA 119
Query: 139 ---PSEATLVTVISASAD----------IAALPQGRELHGFSWRHRFELNVKVKTALVDM 185
P++ T++ V+ A A ++ Q R +H E ++ V TAL+D
Sbjct: 120 ENRPNKLTIIAVLGAIASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDA 179
Query: 186 YAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHST-KALDLFEKMKDE-VQPDHIT 243
Y KCG V+ A +F +++ ++ WNA I A + +AL L +M E + P+ +
Sbjct: 180 YGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRAS 239
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
FV +LS+C R + V + V T +V + G G +DE+ + M
Sbjct: 240 FVAILSSCGDHSSLPLARS-IHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAM 298
Query: 304 RVKPDPGVWGALLNSCKLHGH 324
V+ W A++ + GH
Sbjct: 299 AVRNHVS-WNAMIAAFAQCGH 318
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 190/505 (37%), Positives = 307/505 (60%), Gaps = 34/505 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+++ LV++Y++ L A +FD + R++ WNV++ AY N YE + L++++ + G
Sbjct: 213 VSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEG 272
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ + ++ A+ C ++ G+ E + + + D K
Sbjct: 273 IKLNQASWNAAISGC-----MQNGQH----------ELALGILCKMQDSGIK-------- 309
Query: 129 QVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
P+ T+V+ + ++ +L G+E+HG+ +RH F +V + TALV +YAK
Sbjct: 310 ----------PNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAK 359
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGV 247
CG ++++R++F + K VV+WN MI +MHG ++L LF KM D V+P+ +TF+GV
Sbjct: 360 CGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGV 419
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
LS CS L DEG + F SM ++ I P HY+CMVD+L +GRL+EA D I +M ++P
Sbjct: 420 LSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEP 479
Query: 308 DPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRK 367
WGALL +C+++ +V+L LA +L E+EP +AGNYV+LSNI A W +++RK
Sbjct: 480 TAAAWGALLGACRVYKNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRK 539
Query: 368 LMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTES 427
+M D+G+ K+ SW++VKNK ++F++GD S+ D IY L ++ +M+ GY P T+
Sbjct: 540 MMRDKGLAKTPGRSWVQVKNKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDF 599
Query: 428 VFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITE 487
V +V+ +++ +C HSERLA+AFG++N+ T + + KNL+IC DCH AIK I+KI
Sbjct: 600 VLQNVDQEQREETLCSHSERLAVAFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVG 659
Query: 488 REITVRDVNRYHHFKDGICSCGDYW 512
+I VRD R+HHF+DG C+C D+W
Sbjct: 660 MQIIVRDSLRFHHFRDGYCTCNDFW 684
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 182/422 (43%), Gaps = 85/422 (20%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
P + KL+ L A LFD+IP+ +L W +LI + +G + AI++Y L
Sbjct: 9 LQPCQSIKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTL 68
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
L + PD F KAC+A + ++IH+D I+ + D+ +G ALIDM+ KC V
Sbjct: 69 LSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFV 128
Query: 125 VNARQVFDKILERD---------------------------------PSEATLVTVISAS 151
AR VFD ++ +D + T+ +++ A
Sbjct: 129 NGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPAC 188
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
AD L GRE+HGF R+ E NV V +ALV+MYA +K AR +F+ + + +VSWN
Sbjct: 189 ADYIKL--GREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWN 246
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE----------------------------------- 236
M+T Y ++ + L LF +M+ E
Sbjct: 247 VMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDS 306
Query: 237 -VQPDHITFVGVLSACS-----RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
++P+ IT V L C+ RGG G +F + D I T +V L
Sbjct: 307 GIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTIT------TALVLLYAKC 360
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHDAGNYVI 348
G L+ + + M K D W ++ + +HG + + K+++ +EP+ +
Sbjct: 361 GDLELSRHVFNTMPRK-DVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGV 419
Query: 349 LS 350
LS
Sbjct: 420 LS 421
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 202/556 (36%), Positives = 308/556 (55%), Gaps = 69/556 (12%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A ++ + + RN FLW +IR YA G ++ AI +Y + + + P +FTF LKAC
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDM---------------------------- 117
+ + GR+ H R + V+VG +IDM
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 118 ---YAKCSCVVNARQVFDKILERD----------------PSEA---------------- 142
YA+ + A ++F+ + +D P EA
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 143 -TLVTVISASADIAALPQGRELHGFSWRHRFELN--VKVKTALVDMYAKCGLVKVARNLF 199
T+ ISA A + A + + + + V + +AL+DMY+KCG V+ A N+F
Sbjct: 282 VTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF 341
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLF 257
+ K V ++++MI G A HG + +AL LF M + E++P+ +TFVG L ACS GL
Sbjct: 342 MSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLV 401
Query: 258 DEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
D+GR F+SM + + + P+ HYTCMVDLLG +GRL EA +LI M V+P GVWGALL
Sbjct: 402 DQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLG 461
Query: 318 SCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKS 377
+C++H + ++AE+A E L ELEP GNY++LSN+YA A +W GV ++RKL+ ++G+KK+
Sbjct: 462 ACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKT 521
Query: 378 IACSWIEVKN-KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDE 436
A SW+ KN + H F G+ +HP ++I KL+ L R+ GY P SV +DV ++
Sbjct: 522 PAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNA 581
Query: 437 KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVN 496
K ++ H+E+LA+AF L+ T + + I KNL++C DCH ++ S++T + I +RD
Sbjct: 582 KRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNM 641
Query: 497 RYHHFKDGICSCGDYW 512
R+HHF+ G CSCGD+W
Sbjct: 642 RFHHFRSGDCSCGDFW 657
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 116/260 (44%), Gaps = 32/260 (12%)
Query: 6 HPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY-YRL 64
H V+ + L+ +YS C + A +F + +N+F ++ +I A +G + A+ L+ Y +
Sbjct: 317 HVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMV 376
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN---KWETDVFVGAALIDMYAKC 121
+ + P+ TF AL ACS +++GR++ + + + + D + ++D+ +
Sbjct: 377 TQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYT--CMVDLLGRT 434
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV--- 178
+ A ++ K + +P ++ A + E+ + H FEL +
Sbjct: 435 GRLQEALELI-KTMSVEPHGGVWGALLGA----CRIHNNPEIAEIAAEHLFELEPDIIGN 489
Query: 179 KTALVDMYAKC----GLVKVARNLFEQ-LREKRVVSW--------NAMITGYAMHGHSTK 225
L ++YA G+++V + + E+ L++ VSW + G H S K
Sbjct: 490 YILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNK 549
Query: 226 ALDLFEKMKDEV-----QPD 240
D E++ + + QPD
Sbjct: 550 IQDKLEELVERLTVLGYQPD 569
>gi|326499323|dbj|BAK06152.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 226/547 (41%), Positives = 304/547 (55%), Gaps = 36/547 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G G L TKL L A AH L P + FL++ L R A +G AI Y
Sbjct: 34 GHGRSLPLITKLATLAVAAGAAPYAHLLATSHPAPDSFLFSSLTRTAAHHGLPVAAIAFY 93
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
LL L +FTF KAC+ LSA+ G IH I + +D FV AL+ +Y+KC
Sbjct: 94 RGLLSAALPFSSFTFTAVAKACADLSALRTGAAIHAHSILLGFGSDRFVLTALVVLYSKC 153
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ AR++FD I +R P T V +
Sbjct: 154 GQLGVARKLFDAIRDRSVVAWNAMISGYEQNGLAERGIGVYKEMQAAKAVPDSMTFVATL 213
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A AL GRE+ R +++V + +ALV+MYA+CG+V AR F+ L+E+ VV
Sbjct: 214 SACAQAGALDLGREVERRVVSERMDISVFLGSALVNMYARCGVVDKARRWFDALQERNVV 273
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W +MI GY MHGH +A+ LF M+ E P+H+TFV VLSAC+ GL EGR F M
Sbjct: 274 TWTSMIAGYGMHGHGREAIKLFHLMRCEGPPPNHVTFVAVLSACAHAGLVMEGRDAFACM 333
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ-MRVKPDPGVWGALLNSCKLHGHVK 326
R Y + P V+HY MVD+ G +G LDEA I M +P P VW A+L +CK+H +
Sbjct: 334 KRVYGLVPRVEHYCSMVDMFGRAGLLDEAMQFISDYMPGEPGPEVWTAVLGACKMHKNFN 393
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
L E+LI LEP + +V+LSNIYA + V K+R MI R +KK I S IE+
Sbjct: 394 LGVEVAERLIALEPENPSYHVLLSNIYALSGKMHHVEKVRNTMIKRRLKKQIGFSLIELG 453
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
+H F G+ SHP EIY L+ L R+ AGY+P TESV H++E +E+ + HSE
Sbjct: 454 GTSHLFRMGEKSHPQTTEIYHYLEELIHRITAAGYMPETESVLHELEEEEREGALRYHSE 513
Query: 447 RLAIAFGL-INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
+LA+A+GL ++ T + + KNL+IC DCH+AIKF+S + REI VRD +R+HHFKDG
Sbjct: 514 KLAVAYGLMMSVGSTTPIRVIKNLRICGDCHLAIKFMSAVENREIVVRDKHRFHHFKDGK 573
Query: 506 CSCGDYW 512
CSC +YW
Sbjct: 574 CSCLEYW 580
>gi|357125571|ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 600
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 210/528 (39%), Positives = 302/528 (57%), Gaps = 45/528 (8%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIE-----LYYRLLEIGL-VPDNFTFPFA 79
A LFD+IP+ F +N LIRA + +G + LY R+L G P++FT F
Sbjct: 77 ARALFDQIPEPTAFCYNSLIRAVSGSGSSSNSGTTDTFLLYRRMLHAGSPAPNSFTLAFV 136
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILE--- 136
LKAC+AL EG+++H + E +V L+++YA+C V AR VFD ++E
Sbjct: 137 LKACTALG---EGQQLHAQAFGHGLEPSPYVQTGLLNLYARCEEVALARNVFDGMVEDKN 193
Query: 137 ------------------------RD-------PSEATLVTVISASADIAALPQGRELHG 165
RD P E T+V+VISA A AL G+ +H
Sbjct: 194 LVAWSSMIGGYSRMGMVNEALGLFRDMQAVGVNPDEVTMVSVISACAKAGALDLGKWVHA 253
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
F R +++++ TAL+DMYAKCGL++ A+++F+ + E+ +W+AMI G AMHG +
Sbjct: 254 FIDRKGITVDLELSTALIDMYAKCGLIERAKSVFDSMVERDTKAWSAMIVGLAMHGLAED 313
Query: 226 ALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMV 284
AL LF +M + +V+P+++TFVGVLSAC+ GL D+GR ++ +M ++ I+ S+++Y CMV
Sbjct: 314 ALGLFSRMLQLKVRPNNVTFVGVLSACAHSGLVDDGRRYWCTM-QELGIEASMENYGCMV 372
Query: 285 DLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAG 344
DLL SG LDEA + M + P+ +W LL + K + + ELA +L ELEP +
Sbjct: 373 DLLCRSGLLDEAFSFVTGMPISPNSVIWRNLLVASKSSNRIDIVELASRRLFELEPQNPE 432
Query: 345 NYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDE 404
NYV+LSN+YA + W+ V +RK M D + CS IE+ H F+ D SHP +
Sbjct: 433 NYVLLSNLYALNSQWDRVRYMRKKMKDNNVTVVAGCSSIEINGYLHKFVVSDGSHPEIKK 492
Query: 405 IYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLL 464
I L+ + R+ AG+ P T +V HDV +EK +C HSERLAIA+GL+ T +
Sbjct: 493 IRLVLREIADRVLCAGHKPWTAAVLHDVVEEEKEVALCEHSERLAIAYGLLKTKAPHVIR 552
Query: 465 ITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+ KNL+ C DCH K ISK REI VRD R+H F G CSC D+W
Sbjct: 553 VVKNLRFCPDCHEVTKIISKSYGREIIVRDRVRFHRFIGGSCSCNDFW 600
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 51/86 (59%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L+T L+ +Y+ C + A +FD + +R+ W+ +I A +G E A+ L+ R+L++
Sbjct: 266 LSTALIDMYAKCGLIERAKSVFDSMVERDTKAWSAMIVGLAMHGLAEDALGLFSRMLQLK 325
Query: 69 LVPDNFTFPFALKACSALSAIEEGRR 94
+ P+N TF L AC+ +++GRR
Sbjct: 326 VRPNNVTFVGVLSACAHSGLVDDGRR 351
>gi|218192417|gb|EEC74844.1| hypothetical protein OsI_10704 [Oryza sativa Indica Group]
Length = 614
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 194/494 (39%), Positives = 294/494 (59%), Gaps = 12/494 (2%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFT 75
+Y+ C +A+Q+F+ + R++ WN +I +A G + A++++ L+ +
Sbjct: 1 MYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVAL-----QCP 55
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGA----ALIDMYAKCSCVVNARQVF 131
P A S L ++ + R +++ ++ F G A++ +Y V A ++F
Sbjct: 56 KPDAGTMASILPSMGKARVEDIALLKGVFDEMRFTGLISWNAMLAVYTNNEMHVEAVELF 115
Query: 132 DKILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC 189
++ + +P TL TV+ + +++AL G+ +H R R ++ ++ AL+DMYA C
Sbjct: 116 MRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANC 175
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVL 248
G +K AR++F+ + + VVSW ++I+ Y HGH +A+DLFEKM + ++PD I FV +L
Sbjct: 176 GCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAIL 235
Query: 249 SACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPD 308
+ACS GL D G+ +F SM ++HI P ++HY CMVDLLG +G + EA D IM M +KP+
Sbjct: 236 AACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPN 295
Query: 309 PGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKL 368
VWGALL +C++H ++ + LA + L+ L P G YV+LSNIYARA W V+ +R +
Sbjct: 296 ERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSV 355
Query: 369 MIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESV 428
M +GIKK S E+ + H F GD SHP IY KL L R++E GY P E+
Sbjct: 356 MESKGIKKLPGVSNAELGDSVHTFHIGDTSHPQSKMIYKKLSELLRRIREMGYNPEVEAT 415
Query: 429 FHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITER 488
HDVE ++K + HSE+LAIAF LINT GT + IT NL+ C DCH A K IS I R
Sbjct: 416 LHDVEEEDKEGHLSVHSEKLAIAFLLINTNPGTPIRITMNLRTCSDCHHAAKLISTIAGR 475
Query: 489 EITVRDVNRYHHFK 502
EI ++DVNR H+ K
Sbjct: 476 EIILKDVNRIHYMK 489
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+L L+ +Y+ C CL A +FD + R++ W +I AY +G AI+L+ ++
Sbjct: 163 LLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQ 222
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRR-----IHEDVIRNKWETDVFVGAALIDMYAKCS 122
GL PD+ F L ACS ++ G+ E I K E A ++D+ +
Sbjct: 223 GLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEH----YACMVDLLGRAG 278
Query: 123 CVVNARQVFDKIL 135
C+ R+ +D I+
Sbjct: 279 CI---REAYDFIM 288
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 208/551 (37%), Positives = 303/551 (54%), Gaps = 40/551 (7%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYA-WNGPYEVAIE 59
+G ++ L+ LY+ C ++F +P+ + WN +I A + A++
Sbjct: 990 LGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVK 1049
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
+ ++ G TF L A S+LS E +IH V++ D +G AL+ Y
Sbjct: 1050 YFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYG 1109
Query: 120 KCSCVVNARQVFDKILE-RDP---------------------------------SEATLV 145
KC + ++F ++ E RD T
Sbjct: 1110 KCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFA 1169
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
TV+SA A +A L +G E+H R E +V V +ALVDMY+KCG + A FE + +
Sbjct: 1170 TVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLR 1229
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHIT-FVGVLSACSRGGLFDEGRMF 263
V SWN+MI+GYA HGH KAL LF +M D PDH+ +GVLSACS G +EG
Sbjct: 1230 NVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEH 1289
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC-KLH 322
F+SM Y + P V+H++CMVDLLG +G+LDE D I M +KP+ +W +L +C + +
Sbjct: 1290 FKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRAN 1349
Query: 323 G-HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
G + +L A E L+ELEP +A NYV+L+N+YA WE VAK R M + +KK CS
Sbjct: 1350 GRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARXAMKEAAVKKEAGCS 1409
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMI 441
W+ +K+ H F++GD HP D IY KL+ L +M++AGY+P T+ D+E + K ++
Sbjct: 1410 WVTMKDGVHVFVAGDKLHPEKDXIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELL 1469
Query: 442 CCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF 501
HSE++A+AF ++ + I KNL++C DCH A +ISKI R+I +RD NR+HHF
Sbjct: 1470 SYHSEKIAVAF-VLTRQSALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHF 1528
Query: 502 KDGICSCGDYW 512
+DG CSCGDYW
Sbjct: 1529 EDGKCSCGDYW 1539
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 167/362 (46%), Gaps = 47/362 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+ L+++Y L +A +LFD + RNL W LI Y NG + A +
Sbjct: 574 GFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARF 633
Query: 62 YRLLEIGLVPDNFTFPFALKAC--SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
++ G +P+++ F AL+AC S S + G +IH + + ++ +DV V LI MY
Sbjct: 634 RDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYG 693
Query: 120 KCSCVVN-ARQVFDKILERDP-SEATLVTVISASADIAAL-----PQGRELHGFSWRHR- 171
C N AR VFD+I R+ S ++++V S D + +E GFS++
Sbjct: 694 SCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNE 753
Query: 172 --------------------------------FELNVKVKTALVDMYAKCGLVKVARNLF 199
F ++ V +ALV +A+ GL A+N+F
Sbjct: 754 YTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIF 813
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDE 259
EQ+ + VVS N ++ G A +F +MKD V + ++V +LSA S + +E
Sbjct: 814 EQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEE 873
Query: 260 GRM----FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
GR ++R D V +V++ SG + +AC + ++ V+ D W +L
Sbjct: 874 GRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACS-VFELMVEKDSVSWNSL 932
Query: 316 LN 317
++
Sbjct: 933 IS 934
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 165/371 (44%), Gaps = 39/371 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ LV++Y+ + +A +F+ + +++ WN LI N E A E + R+ G
Sbjct: 897 IGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTG 956
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+P NFT L +C++L I G +IH D ++ +TDV V AL+ +YA+ C
Sbjct: 957 SMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECL 1016
Query: 129 QVFDKILERDP----------------------------------SEATLVTVISASADI 154
+VF + E D S T + ++SA + +
Sbjct: 1017 KVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSL 1076
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR-VVSWNAM 213
+ ++H ++ + + AL+ Y KCG + +F ++ E R VSWN+M
Sbjct: 1077 SLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSM 1136
Query: 214 ITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I+GY + KA+DL M + Q D TF VLSAC+ + G +R
Sbjct: 1137 ISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRAC- 1195
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA-ELA 331
++ V + +VD+ GR+D A M ++ + W ++++ HGH + A +L
Sbjct: 1196 MESDVVVGSALVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYARHGHGEKALKLF 1254
Query: 332 LEKLIELEPHD 342
+++ +P D
Sbjct: 1255 TRMMLDGQPPD 1265
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 167/363 (46%), Gaps = 51/363 (14%)
Query: 3 FGFHPVLATKLVHLYSAC-DCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
+G V+ L+ +Y +C D ++A +FDRI RN WN +I Y+ G A +L+
Sbjct: 678 YGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLF 737
Query: 62 YRLLEIGL----VPDNFTFPFALKACSALSAIEEGRRIHEDVI----RNKWETDVFVGAA 113
+ + GL P+ +TF + A A S+++ G + E ++ ++ + D++VG+A
Sbjct: 738 SSMQKEGLGFSFKPNEYTFGSLITA--ACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSA 795
Query: 114 LIDMYAKCSCVVNARQVFDK---------------ILERDPSEA---------------- 142
L+ +A+ +A+ +F++ ++++ EA
Sbjct: 796 LVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINS 855
Query: 143 -TLVTVISASADIAALPQGR----ELHGFSWRHRFELN-VKVKTALVDMYAKCGLVKVAR 196
+ V ++SA ++ + L +GR E+H R N V + LV+MYAK G + A
Sbjct: 856 DSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADAC 915
Query: 197 NLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGG 255
++FE + EK VSWN++I+G + S A + F +M+ P + T + LS+C+ G
Sbjct: 916 SVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLG 975
Query: 256 LFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGAL 315
G ++ +D V ++ L +G E C + + + D W ++
Sbjct: 976 WIMLGEQIHCDGLK-LGLDTDVSVSNALLALYAETGCFTE-CLKVFSLMPEYDQVSWNSV 1033
Query: 316 LNS 318
+ +
Sbjct: 1034 IGA 1036
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 140 SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLF 199
S T ++I+ + RELH S ++ F N+ + L+++Y + G + A+ LF
Sbjct: 543 SSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLF 602
Query: 200 EQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGG 255
+++ + +V+W +I+GY +G +A F M + P+H F L AC G
Sbjct: 603 DEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 659
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 209/542 (38%), Positives = 298/542 (54%), Gaps = 36/542 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF L+ +YS+ + A +F R+ R+ W +I Y NG + A+E+Y
Sbjct: 326 GFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVY 385
Query: 62 YRLLEIGLV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
L+E+ V PD+ T AL AC++L ++ G ++HE + + V AL++MYAK
Sbjct: 386 -ALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAK 444
Query: 121 CSCVVNARQVFDKILERD--------------------------------PSEATLVTVI 148
+ A +VF + ++D P+ T + +
Sbjct: 445 SKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLADVKPNSVTFIAAL 504
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A A +L G+E+H R V AL+D+Y KCG A F K VV
Sbjct: 505 AACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVV 564
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWN M+ G+ HGH AL F +M + + PD +TFV +L CSR G+ +G F SM
Sbjct: 565 SWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSM 624
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
Y I P+++HY CMVDLL GRL E + I +M + PD VWGALLN C++H +++L
Sbjct: 625 TEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIEL 684
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
ELA + ++ELEP+DAG +V+LS++YA A W V+K+RK M +G++ CSW+EVK
Sbjct: 685 GELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKGLEHDYGCSWVEVKG 744
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
HAFL+ D SHP EI L + RMK +G+ P ES + + K +++C HSER
Sbjct: 745 AIHAFLTDDESHPQIKEINDVLDGIYERMKASGFAP-VESYSLEDKEVSKDDVLCGHSER 803
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+AFGLINT GT + +TKN C+ CH ++ ISKI REITVRD +HHF+DG CS
Sbjct: 804 LAVAFGLINTTPGTSICVTKNQYTCESCHGILRMISKIVRREITVRDTKEFHHFRDGSCS 863
Query: 508 CG 509
CG
Sbjct: 864 CG 865
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 138/270 (51%), Gaps = 34/270 (12%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACS 84
+A ++F ++P+R++F WNV++ Y G E A++LY+R+L G PD +TFP L++C
Sbjct: 147 HAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCG 206
Query: 85 ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL--------- 135
+ + GR +H V+R +V V AL+ MYAKC V AR+VFD +
Sbjct: 207 GVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNA 266
Query: 136 ------------------------ERDPSEATLVTVISASADIAALPQGRELHGFSWRHR 171
E +P+ T+ +V AS ++ L +E+H + +
Sbjct: 267 MIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRG 326
Query: 172 FELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFE 231
F +V +L+ MY+ G + A +F ++ + +SW AMI+GY +G KAL+++
Sbjct: 327 FATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYA 386
Query: 232 KMK-DEVQPDHITFVGVLSACSRGGLFDEG 260
M+ + V PD +T L+AC+ G D G
Sbjct: 387 LMEVNNVSPDDVTVASALAACASLGRLDVG 416
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 169/397 (42%), Gaps = 40/397 (10%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G G + LV +Y+ C + A ++FD + + WN +I + N E +EL+
Sbjct: 225 GLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELF 284
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+LE + P+ T A LS ++ + IH ++ + TDV +LI MY+
Sbjct: 285 LHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSL 344
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ A VF ++ RD P + T+ + +
Sbjct: 345 GRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASAL 404
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
+A A + L G +LH + F + V ALV+MYAK +++ A +F+ + +K V+
Sbjct: 405 AACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVI 464
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
SW++MI G+ + + +AL F M +V+P+ +TF+ L+AC+ G G+ ++
Sbjct: 465 SWSSMIAGFCFNHKNFEALYYFRHMLADVKPNSVTFIAALAACAATGSLRCGKEIHAHVL 524
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
R I ++DL G+ A K D W +L HGH +A
Sbjct: 525 RQ-GIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTK-DVVSWNIMLAGFVAHGHGDIA 582
Query: 329 ELALEKLIELEPH-DAGNYVILSNIYARAA----NWE 360
+++E H D +V L +RA WE
Sbjct: 583 LSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWE 619
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 174 LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM 233
+++ A++ M + G A +F ++ E+ V SWN M+ GY G +ALDL+ +M
Sbjct: 127 FGLRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRM 186
Query: 234 K-DEVQPDHITFVGVLSACSRGGLFD 258
+PD TF VL +C GG+ D
Sbjct: 187 LWAGARPDVYTFPCVLRSC--GGVPD 210
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 202/612 (33%), Positives = 318/612 (51%), Gaps = 101/612 (16%)
Query: 2 GFGFHPVLATKLVHLYSAC----DCLHNAHQLFDRIPQRN-------------------- 37
G G+ ++ LV +YS C LH+A ++FD I +++
Sbjct: 179 GAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLG 238
Query: 38 ------------LFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
L +N +I Y G Y+ A+E+ R++ G+ D FT+P ++AC+
Sbjct: 239 EELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACAT 298
Query: 86 LSAIEEGRRIHEDVIR-------------------NKWE-----------TDVFVGAALI 115
++ G+++H V+R K++ D+ AL+
Sbjct: 299 AGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALL 358
Query: 116 DMYAKCSCVVNARQVFDKILER---------------------------------DPSEA 142
Y + A+ +F ++ E+ +P +
Sbjct: 359 SGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDY 418
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
I + A + A G++ H + F+ ++ AL+ MYAKCG+V+ AR +F +
Sbjct: 419 AFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM 478
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGR 261
VSWNA+I HGH +A+D++E+M K ++PD IT + VL+ACS GL D+GR
Sbjct: 479 PCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGR 538
Query: 262 MFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKL 321
+F+SM Y I P HY ++DLL SG+ +A +I + KP +W ALL+ C++
Sbjct: 539 KYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRV 598
Query: 322 HGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACS 381
HG+++L +A +KL L P G Y++LSN++A WE VA++RKLM DRG+KK +ACS
Sbjct: 599 HGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACS 658
Query: 382 WIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVEND-EKANM 440
WIE++ + H FL D SHP + +Y L+ L M+ GYVP T V HDVE+D K +M
Sbjct: 659 WIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDM 718
Query: 441 ICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHH 500
+ HSE++A+AFGL+ P GT + I KNL+ C DCH +F+S + +R+I +RD R+HH
Sbjct: 719 LTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHH 778
Query: 501 FKDGICSCGDYW 512
F++G CSCG++W
Sbjct: 779 FRNGECSCGNFW 790
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 154/341 (45%), Gaps = 59/341 (17%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
T +V Y A + A +F++ P R+ ++N +I ++ N AI L+ ++ G
Sbjct: 84 TTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143
Query: 69 LVPDNFTFPFALKACSALSAIEEGR--RIHEDVIRNKWETDVFVGAALIDMYAKC----S 122
PDNFTF L A AL A +E + + H +++ V AL+ +Y+KC S
Sbjct: 144 FKPDNFTFASVL-AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPS 202
Query: 123 CVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
+ +AR+VFD+ILE+D SW T +
Sbjct: 203 LLHSARKVFDEILEKDER--------------------------SW-----------TTM 225
Query: 183 VDMYAKCGLVKVARNLFEQLREK-RVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPD 240
+ Y K G + L E + + ++V++NAMI+GY G +AL++ +M ++ D
Sbjct: 226 MTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELD 285
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVR----DYHIDPSVQHYTCMVDLLGHSGRLDEA 296
T+ V+ AC+ GL G+ ++R +H D S +V L G+ DEA
Sbjct: 286 EFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNS------LVSLYYKCGKFDEA 339
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+ +M K D W ALL+ GH+ A+L +++ E
Sbjct: 340 RAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIFKEMKE 379
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 42/176 (23%)
Query: 80 LKACSAL--SAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER 137
L+ C L ++++ R +H ++I ++ + LID+Y K S + ARQ+FD+I E
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP 78
Query: 138 DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
D +T +V Y G + +AR
Sbjct: 79 DKI-------------------------------------ARTTMVSGYCASGDITLARG 101
Query: 198 LFEQ--LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSA 250
+FE+ + + V +NAMITG++ + A++LF KMK E +PD+ TF VL+
Sbjct: 102 VFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAG 157
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GF L+ +Y+ C + A Q+F +P + WN LI A +G A+++
Sbjct: 446 IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDV 505
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIH---EDVIRNKWETDVFVGAALIDM 117
Y +L+ G+ PD T L ACS +++GR+ E V R D + A LID+
Sbjct: 506 YEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHY--ARLIDL 563
Query: 118 YAKCSCVVNARQVFDKILERDPSE 141
+ +A V + + + +E
Sbjct: 564 LCRSGKFSDAESVIESLPFKPTAE 587
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 211/581 (36%), Positives = 309/581 (53%), Gaps = 72/581 (12%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G H L+ Y C L +A +LFD +PQ++ W ++ A + A +
Sbjct: 38 GLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSIS 97
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAI--EEGRRIH----------EDVIRNK------ 103
+L GL PD+F F +KAC+ L ++ + G+++H +DV+++
Sbjct: 98 LPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYA 157
Query: 104 ---------------WETDVFVGAALIDMYAKCSCVVNARQVF----------------- 131
+E A+I YA+ + A ++F
Sbjct: 158 KFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISG 217
Query: 132 -------------------DKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
+ + DP L +V+ A A+ A G+++H +
Sbjct: 218 LVQSGNANDALYLFVEMRREGVSIADP--LVLSSVVGACANSAVRELGKQVHCVVITLGY 275
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
E + + ALVDMYAKC V A+ +F ++R K VVSW ++I G A HG + +AL L++
Sbjct: 276 ESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDD 335
Query: 233 MK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
M V+P+ +TFVG++ ACS GL +GR F+SMV D+ I PS+QHYTC++DL SG
Sbjct: 336 MVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSG 395
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSN 351
LDEA +LI M VKPD W ALL++CK HG+ K+A + L++L+P D +Y++LSN
Sbjct: 396 HLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPEDPSSYILLSN 455
Query: 352 IYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKW 411
IYA A WE V+ +RKLM + +KK S +++ + F +G+AS P DEI +
Sbjct: 456 IYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHAGEASQPMKDEILGLMTK 515
Query: 412 LEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKI 471
L+ M+ GYVP T SV D++ EK + HSERLA+A+GL+ GT + I KNL++
Sbjct: 516 LDSEMRRRGYVPDTSSVLLDMDQQEKERQLFWHSERLALAYGLLKAVPGTTIRIVKNLRV 575
Query: 472 CDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
C DCH +K IS IT REI VRDV RYHHFKDG CSC D+W
Sbjct: 576 CGDCHTVLKLISAITSREIYVRDVKRYHHFKDGKCSCNDFW 616
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 202/551 (36%), Positives = 314/551 (56%), Gaps = 64/551 (11%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYA-WNGPYEVAIELYYRLLEIGLVPDN--FTFPFA 79
L A +F RI N F++ LI+ ++ + P E I LY R+L F+ P
Sbjct: 57 LDYASSVFSRIQHPNSFIFFALIKGFSDTSNPVESLI-LYARMLSCLNYSSGVEFSIPSV 115
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
LKAC L A +EGR++H V++ D FVG +++ MY + AR+VFD++ RD
Sbjct: 116 LKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDV 175
Query: 139 ---------------------------------------------------PSEATLVTV 147
P +V+V
Sbjct: 176 VSWNSMIAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKEMLSLGLRPDGPAIVSV 235
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVK-VKTALVDMYAKCGLVKVARNLFEQLREKR 206
+SA AD+ + +G+ LH + ++ EL+ + +AL+DMY+KCG ++ A ++F + +R
Sbjct: 236 LSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRR 295
Query: 207 VVS-WNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFF 264
+ WN+MI+G A+HG + +ALD+F +M + +++P+ ITF+G+LS CS GGL +EG+ +F
Sbjct: 296 NIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYF 355
Query: 265 ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
ESM Y I P +QHY CM+DL G +GRL++A +I M + D W A+L++ HGH
Sbjct: 356 ESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGH 415
Query: 325 VKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
+++ + A + IEL P D+ +YV+LSNIYA+A W+ VAK+R +M RG+KK CS +
Sbjct: 416 IEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSML 475
Query: 385 VKNKAHAFLSG---DASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMI 441
V K H FL G D+S+ ++ AK+ + R+K GY P V D+E++ K +++
Sbjct: 476 VNGKVHEFLLGKELDSSYSG--QVLAKIAEVVSRLKLQGYEPDLTQVLLDIEDEGKESLL 533
Query: 442 CCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHF 501
HSE++AIAFGLI+ + I KNL++C DCH +K +SK+ R+I +RD NR+HHF
Sbjct: 534 NLHSEKMAIAFGLIHINKSAPIHIVKNLRVCCDCHCFMKLVSKVYNRQIIMRDQNRFHHF 593
Query: 502 KDGICSCGDYW 512
++G CSC +YW
Sbjct: 594 ENGCCSCNEYW 604
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 150/357 (42%), Gaps = 56/357 (15%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY--- 61
F P + +V +Y + A ++FDR+P R++ WN +I Y G E+A EL+
Sbjct: 142 FDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELASELFDEM 201
Query: 62 ----------------YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWE 105
+L +GL PD L A + L +EEG+ +H V NK E
Sbjct: 202 PERDLVSCNAMIDGYGKEMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIE 261
Query: 106 -TDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELH 164
+ F+G+ALIDMY+KC + NA VF I R D ++ G +H
Sbjct: 262 LSSGFIGSALIDMYSKCGYIENAYHVFRSISHR-----------RNIGDWNSMISGLAIH 310
Query: 165 GFSW----------RHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK-----RVVS 209
G + R E N L+ + GLV+ + FE + EK R+
Sbjct: 311 GLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQH 370
Query: 210 WNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
+ MI + G AL + + M E D + + +LSA + G + G+ + +R
Sbjct: 371 YGCMIDLFGRAGRLEDALGVIQNMPFEA--DLLAWKAILSASMKHGHIEIGK---SAALR 425
Query: 270 DYHIDP-SVQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPDPGVWGALLNSCKLH 322
+ P Y + ++ +GR D+ + + MR VK G L+N K+H
Sbjct: 426 AIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVNG-KVH 481
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 143/309 (46%), Gaps = 30/309 (9%)
Query: 59 ELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY 118
+++ ++++ L+ FT + CS LS + G V + F+ ALI +
Sbjct: 24 QIHAQMIKTNLLNHQFTVSRLIAFCS-LSGVSGGLDYASSVFSRIQHPNSFIFFALIKGF 82
Query: 119 AKCSCVVNARQVFDKILE----RDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL 174
+ S V + ++ ++L E ++ +V+ A + A +GR++HG +
Sbjct: 83 SDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWF 142
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
+ V ++V MY G +++AR +F+++ + VVSWN+MI GY G A +LF++M
Sbjct: 143 DPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELASELFDEMP 202
Query: 235 DE--------------------VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
+ ++PD V VLSA + G +EG+ + + V I+
Sbjct: 203 ERDLVSCNAMIDGYGKEMLSLGLRPDGPAIVSVLSAIADLGFVEEGK-WLHAYVSMNKIE 261
Query: 275 PSVQHY-TCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
S + ++D+ G ++ A + + + + G W ++++ +HG LA AL+
Sbjct: 262 LSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHG---LAREALD 318
Query: 334 KLIELEPHD 342
+E+E D
Sbjct: 319 IFVEMERMD 327
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 191/512 (37%), Positives = 290/512 (56%), Gaps = 45/512 (8%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + T L+ +Y L +A +FD + RN+F WN L+ Y++ G +E A+ L
Sbjct: 941 GFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLL 1000
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ + G+ PD T W +I YA
Sbjct: 1001 NQMEKEGIKPDLVT----------------------------WN-------GMISGYAMW 1025
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
C AR+ F P+ A++ ++ A A ++ L +G+E+H S R+ F +V V TA
Sbjct: 1026 GC---ARKAFM------PNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATA 1076
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPD 240
L+DMY+K +K A +F +++ K + SWN MI G+A+ G +A+ +F +M K V PD
Sbjct: 1077 LIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPD 1136
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
ITF +LSAC GL EG +F+SM+ DY I P ++HY CMVDLLG +G LDEA DLI
Sbjct: 1137 AITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLI 1196
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
M +KPD +WGALL SC++H ++ AE A + L +LEP+++ NY+++ N+Y+ WE
Sbjct: 1197 HTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWE 1256
Query: 361 GVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAG 420
+ LR+LM G++ SWI++ + H F S + HP+ +IY +L L MK+ G
Sbjct: 1257 DMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLG 1316
Query: 421 YVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIK 480
YVP V+ +++ EK ++ H+E+LAI +GLI G + + KN +IC DCH A K
Sbjct: 1317 YVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAK 1376
Query: 481 FISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+IS + RE+ +RD R+HHF++G CSC D+W
Sbjct: 1377 YISLVKARELFLRDGVRFHHFREGKCSCNDFW 1408
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 130/276 (47%), Gaps = 35/276 (12%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWN-GPYEVAIELYYRLLEIG 68
A L+ Y +A +F RN WN + + + G + +E++ L G
Sbjct: 610 AKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKG 669
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+V D+ + ALK C+ + I G IH +I+ ++ DV++ AL++ Y +C + A
Sbjct: 670 VVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKAN 729
Query: 129 QVF------------DKILERDPSE---------------------ATLVTVISASADIA 155
QVF + I+ SE AT+V V+ A +
Sbjct: 730 QVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMG 789
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL +++HG+ +R + +V + L+ MY+K G +++AR +F+ + + SWN+MI+
Sbjct: 790 ALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMIS 849
Query: 216 GYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSA 250
YA G A LF +++ +++PD +T+ +LS
Sbjct: 850 SYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSG 885
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 150/343 (43%), Gaps = 47/343 (13%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF L L++ Y C L A+Q+F +P LWN I + + +EL+
Sbjct: 704 GFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELF 763
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ L + T L+AC + A+ ++IH V R ++DV + LI MY+K
Sbjct: 764 RKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKN 823
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
+ AR+VFD + R+ S SW +
Sbjct: 824 GKLELARRVFDSMENRNTS--------------------------SW-----------NS 846
Query: 182 LVDMYAKCGLVKVARNLFEQLR----EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE- 236
++ YA G + A +LF +L + +V+WN +++G+ +HG+ + L++ ++M+ E
Sbjct: 847 MISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEG 906
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+P+ + VL A S G + G+ ++R+ D V T ++D+ + L A
Sbjct: 907 FKPNSSSMTSVLQAISELGFLNMGKETHGYVLRN-GFDCDVYVGTSLIDMYVKNHSLXSA 965
Query: 297 CDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
+ M+ + + W +L++ G + E AL L ++E
Sbjct: 966 QAVFDNMKNR-NIFAWNSLVSGYSFKG---MFEDALRLLNQME 1004
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 121/254 (47%), Gaps = 46/254 (18%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+ +YS L A ++FD + RN WN +I +YA G A L+Y L
Sbjct: 812 LCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSD 871
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ PD T+ + + G +H ++ +V
Sbjct: 872 MKPDIVTW----------NCLLSGHFLH------GYKEEVL------------------- 896
Query: 129 QVFDKILER------DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
IL+R P+ +++ +V+ A +++ L G+E HG+ R+ F+ +V V T+L
Sbjct: 897 ----NILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSL 952
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDH 241
+DMY K + A+ +F+ ++ + + +WN++++GY+ G AL L +M+ E ++PD
Sbjct: 953 IDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDL 1012
Query: 242 ITFVGVLSACSRGG 255
+T+ G++S + G
Sbjct: 1013 VTWNGMISGYAMWG 1026
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 190/521 (36%), Positives = 291/521 (55%), Gaps = 34/521 (6%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
AH +F NLF+WN +IR Y+ + AI LY + G+ P+++TF F L AC
Sbjct: 20 AHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVLNACCK 79
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSE---- 141
L + EG+ +H +++ + + + LI +YA C C+ A +FD++ E D +
Sbjct: 80 LLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTM 139
Query: 142 -----------------------------ATLVTVISASADIAALPQGRELHGFSWRHRF 172
TL +V+ D+ L G+ +H + +
Sbjct: 140 VSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYIDKEGV 199
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
+++V + TALV MY+KCG + A +F+ + E+ V +W+ MI GYA+HGH KAL LF+
Sbjct: 200 KIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKALQLFDA 259
Query: 233 MK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
MK ++ P+ +TF VLSA S GL ++G FE+M +Y I P ++HY CMVDL +G
Sbjct: 260 MKRSKIIPNCVTFTSVLSAYSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAG 319
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSN 351
+ A I M ++P+ +W LL +CK HG+ L E K+++L+P NYV +SN
Sbjct: 320 MVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKGLGEHISRKILKLDPSSPENYVFVSN 379
Query: 352 IYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKW 411
+YA W V ++R LM ++ KK S IE+ H F+ G+ SHP ++IY L
Sbjct: 380 VYASLGRWSSVCQVRSLMKEKAPKKQHGWSSIEINFMVHKFIMGEESHPKREKIYGMLHQ 439
Query: 412 LEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKI 471
+ ++K+ G+V T V HD++ +EK + HSERLAIA+GL++TP+G+ + I KNL+
Sbjct: 440 MARKLKQVGHVASTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRA 499
Query: 472 CDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
C DCH IK IS++ REI +RD +HHF++ CSC DYW
Sbjct: 500 CRDCHEVIKLISEVYNREIILRDRVCFHHFRERGCSCNDYW 540
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 139/311 (44%), Gaps = 13/311 (4%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G F L L+ LY+AC C+ A +FD +P+ + W+ ++ Y+ NG ++L
Sbjct: 97 GLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYSQNGQAVETLKLL 156
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ + D FT + C L ++ G+ +H + + + DV +G AL+ MY+KC
Sbjct: 157 REMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYIDKEGVKIDVVLGTALVGMYSKC 216
Query: 122 SCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTA 181
+ NA +VF + ERD + T +I+ A + +L R + N T+
Sbjct: 217 GSLDNALKVFQGMAERDVT--TWSIMIAGYAIHGHDEKALQLFDAMKRSKIIPNCVTFTS 274
Query: 182 LVDMYAKCGLVKVARNLFEQLREK-----RVVSWNAMITGYAMHGHSTKALDLFEKMKDE 236
++ Y+ GLV+ +FE + + ++ + M+ + G A + M
Sbjct: 275 VLSAYSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMP-- 332
Query: 237 VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV-QHYTCMVDLLGHSGRLDE 295
++P+ + + +L AC G G +++ +DPS ++Y + ++ GR
Sbjct: 333 IEPNVVLWRTLLGACKTHGYKGLGEHISRKILK---LDPSSPENYVFVSNVYASLGRWSS 389
Query: 296 ACDLIMQMRVK 306
C + M+ K
Sbjct: 390 VCQVRSLMKEK 400
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 3/136 (2%)
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVL 248
G V A +F + WN +I GY++ A+ L++ M + P+ TF VL
Sbjct: 15 GHVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVL 74
Query: 249 SACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPD 308
+AC + EG+ +V+ +D ++ L G +D AC + +M +PD
Sbjct: 75 NACCKLLRLCEGQELHSQIVKA-GLDFETPLLNGLIKLYAACGCMDYACVMFDEMP-EPD 132
Query: 309 PGVWGALLNSCKLHGH 324
W +++ +G
Sbjct: 133 SASWSTMVSGYSQNGQ 148
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 205/549 (37%), Positives = 305/549 (55%), Gaps = 75/549 (13%)
Query: 39 FLWNVLIRAYAWN--GPYE-VAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRI 95
FLWN++IRA N P I +Y R+ + PD TFPF L + + G+R
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRT 84
Query: 96 HEDVIRNKWETDVFVGAALIDMYAKC---------------------SCVVNA------- 127
H ++ + D FV +L++MY+ C + VVNA
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 128 ---RQVFDKILERD--------------------------------------PSEATLVT 146
R++FD++ ER+ P+E T+ T
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMST 204
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V+SA + AL QG+ +H + ++ E+++ + TAL+DMYAKCG ++ A+ +F L K+
Sbjct: 205 VLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK 264
Query: 207 -VVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMF 263
V +++AMI AM+G + + LF +M D + P+ +TFVG+L AC GL +EG+ +
Sbjct: 265 DVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSY 324
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
F+ M+ ++ I PS+QHY CMVDL G SG + EA I M ++PD +WG+LL+ ++ G
Sbjct: 325 FKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 384
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
+K E AL++LIEL+P ++G YV+LSN+YA+ W V +R M +GI K CS++
Sbjct: 385 DIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYV 444
Query: 384 EVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICC 443
EV+ H F+ GD S + IYA L + R++EAGYV T+ V D+ +K +
Sbjct: 445 EVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSY 504
Query: 444 HSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKD 503
HSE+LAIAF L+ T GT + I KNL+IC DCH+ +K ISK+ REI VRD NR+HHF+D
Sbjct: 505 HSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRD 564
Query: 504 GICSCGDYW 512
G CSC D+W
Sbjct: 565 GSCSCRDFW 573
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 195/545 (35%), Positives = 305/545 (55%), Gaps = 34/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + ++++Y C + +A ++F+ + + F +N +I Y G + ++ +
Sbjct: 138 GFAEQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIV 197
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ D ++ L C+++ G ++H ++ + E +V+VG+AL+DMY KC
Sbjct: 198 RNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKC 257
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
V +A + F+ + E++ P+E T +
Sbjct: 258 DHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVAL 317
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
++ A +AAL G L + ++ V AL++MY+K G ++ A +F + + VV
Sbjct: 318 NSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVV 377
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWN +ITGYA HG + + ++ F M V P ++TFVGVLSAC++ GL DE + +M
Sbjct: 378 SWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTM 437
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
+++ I P +HYTCMV LL GRLDEA I+ + D W +LLNSC+++ + L
Sbjct: 438 MKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGL 497
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E++++LEP D G YV+LSN+YA+A W+GV K+RK M +R ++KS SWI V +
Sbjct: 498 GHRVAEQILQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGVSWIHVGS 557
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
H F S + HP D+I KL+ L ++K GYVP V HD++++ K + HSE+
Sbjct: 558 DVHVFTSEEKVHPQMDQIAKKLEELIDQIKAIGYVPNFAVVLHDIDDERKEEHLMYHSEK 617
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
LA+AFGLI+TP G + I KNL+ICDDCH+AIK IS +T R+I VRD R+H + GICS
Sbjct: 618 LALAFGLIHTPKGATIHIMKNLRICDDCHVAIKLISVVTSRKIVVRDAVRFHCIEGGICS 677
Query: 508 CGDYW 512
C DYW
Sbjct: 678 CNDYW 682
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 166/353 (47%), Gaps = 39/353 (11%)
Query: 5 FHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
F VL L+ Y+ C + A +FD +P RN N+L+ YA +G ++ +++L R+
Sbjct: 43 FDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSGYASSGRHKESLQL-LRV 101
Query: 65 LEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCV 124
++ G+ + + A+ A + + + + GR+ H ++ + +V A++ MY +C+ +
Sbjct: 102 VDFGM--NEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHM 159
Query: 125 VNARQVFDKI---------------LERDPSEATL------------------VTVISAS 151
+A +VF+ + L+R + +L V V+
Sbjct: 160 EDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHC 219
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
A + G ++H + + R ELNV V +ALVDMY KC V A FE L EK VVSW
Sbjct: 220 ASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWT 279
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
A++T Y + AL LF M+ E VQP+ T+ L++C+ G +++
Sbjct: 280 AVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKT 339
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
H D + ++++ SG +++A + + M ++ D W ++ HG
Sbjct: 340 GHWDHLLVS-NALMNMYSKSGSIEDAHRVFISMPLR-DVVSWNLIITGYAHHG 390
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 122/284 (42%), Gaps = 41/284 (14%)
Query: 89 IEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLV--- 145
+ +G+ +H +I DV + LI YAKC V AR VFD + R+ A L+
Sbjct: 27 LSKGKALHARLI-TAAHFDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSG 85
Query: 146 ---------------------------TVISASADIAALPQGRELHGFSWRHRFELNVKV 178
+SA+A++ + GR+ HG++ + F V
Sbjct: 86 YASSGRHKESLQLLRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYV 145
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ 238
A++ MY +C ++ A +FE + ++N+MI GY G +L + M E +
Sbjct: 146 FNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAE 205
Query: 239 P-DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEAC 297
D++++V VL C+ G ++ ++ +V + +VD+ G+ D
Sbjct: 206 KWDYVSYVAVLGHCASMKDSVLGAQVHAQALKK-RLELNVYVGSALVDMY---GKCDHVH 261
Query: 298 DLIMQMRVKPDPGV--WGALLNSCKLHGHVKLAELALEKLIELE 339
D V P+ V W A++ + + +L E AL+ +++E
Sbjct: 262 DANRAFEVLPEKNVVSWTAVMTA---YTQNELYEDALQLFLDME 302
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 193/548 (35%), Positives = 317/548 (57%), Gaps = 37/548 (6%)
Query: 1 MGFGFHPV-LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIE 59
+G G V + + LV +Y+ + +A + D++ +++ L+ LI Y+ +G +++
Sbjct: 205 LGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQ 264
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
++ + + G+ + +T L C L + GR IH +++ E+ V +L+ MY
Sbjct: 265 VFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYY 324
Query: 120 KCSCVVNARQVFDKILERD---------------------------------PSEATLVT 146
+C V ++ +VF + + + P+ TL +
Sbjct: 325 RCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSS 384
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V+ A + +A L QG+++H + +++ V AL+D Y KCG ++AR++F L E
Sbjct: 385 VLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVD 444
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
VVS N+MI YA +G +AL LF MKD ++P+++T++GVLSAC+ GL +EG F
Sbjct: 445 VVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFS 504
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
S +I+ + HY CMVDLLG +GRL EA LI Q+ + D +W LL++C++HG V
Sbjct: 505 SARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWRTLLSACRIHGDV 563
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
++A+ + ++I+L P D G +V+LSN+YA NW V +++ M + +KK+ A SW++V
Sbjct: 564 EMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDV 623
Query: 386 KNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHS 445
+ + H F++GD SHPN +I KL+ L ++KE GYVP T V D++ ++K + HS
Sbjct: 624 EREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHS 683
Query: 446 ERLAIAFGLINTP-DGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
E+LA+AF L + T + I KNL++C DCH +KF+SKI R+I RDV R+HHF++G
Sbjct: 684 EKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNG 743
Query: 505 ICSCGDYW 512
+CSCGDYW
Sbjct: 744 LCSCGDYW 751
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 161/328 (49%), Gaps = 36/328 (10%)
Query: 4 GFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR 63
GFH L KL+ Y C + A ++FD +P R++ WN +I +Y NG + AI++Y R
Sbjct: 107 GFHHSLGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQR 166
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIH-EDVIRNKWETDVFVGAALIDMYAKCS 122
++ G++PD FTF KA S L + EG+R H + V+ ++VFVG+AL+DMYAK
Sbjct: 167 MVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFG 226
Query: 123 CVVNARQVFDKILERD---------------------------------PSEATLVTVIS 149
+ +AR V D+++ +D +E TL +V+
Sbjct: 227 KMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLV 286
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
++ L GR +HG + E V +T+L+ MY +CGLV + +F+Q V+
Sbjct: 287 CCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVT 346
Query: 210 WNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
W ++I G +G AL F +M + + P+ T VL ACS + ++G+ ++V
Sbjct: 347 WTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQ-IHAIV 405
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+ +D ++D G G + A
Sbjct: 406 MKFGLDIDKYVGAALIDFYGKCGSTEIA 433
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 132/292 (45%), Gaps = 39/292 (13%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
++ C + +I + +I ++ + + G LID Y KC VV AR+VFD++ R
Sbjct: 84 IQQCIGIKSITDITKIQSHALKRGFHHSL--GNKLIDAYLKCGSVVYARKVFDEVPHRHI 141
Query: 139 --------------------------------PSEATLVTVISASADIAALPQGRELHGF 166
P E T +V A +D+ + +G+ HG
Sbjct: 142 VAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQ 201
Query: 167 SWRHRFEL-NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
S + NV V +ALVDMYAK G ++ AR + +Q+ K VV + A+I GY+ HG +
Sbjct: 202 SVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGE 261
Query: 226 ALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMV 284
+L +F M K ++ + T VL C GR+ +V+ ++ +V T ++
Sbjct: 262 SLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVK-AGLESAVASQTSLL 320
Query: 285 DLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
+ G +D++ + Q + P+ W +++ +G ++A L +++
Sbjct: 321 TMYYRCGLVDDSLKVFKQF-INPNQVTWTSVIVGLVQNGREEIALLKFRQML 371
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 367 bits (942), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 190/539 (35%), Positives = 317/539 (58%), Gaps = 36/539 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A+ LV +Y+ D + +AH +F R+ ++++ L+ LI YA +G A++++ ++ G
Sbjct: 139 VASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRG 198
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P+ +T L C L + G+ IH V+++ E+ V +L+ MY++C+ + ++
Sbjct: 199 VKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSI 258
Query: 129 QVFDKI---------------------------------LERDPSEATLVTVISASADIA 155
+VF+++ P+ TL +++ A + +A
Sbjct: 259 KVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLA 318
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L G ++H + + + N AL+++Y KCG + AR++F+ L E VV+ N+MI
Sbjct: 319 MLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIY 378
Query: 216 GYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
YA +G +AL+LFE++K+ + P+ +TF+ +L AC+ GL +EG F S+ +++I+
Sbjct: 379 AYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIE 438
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEK 334
++ H+TCM+DLLG S RL+EA LI ++R PD +W LLNSCK+HG V++AE + K
Sbjct: 439 LTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLWRTLLNSCKIHGEVEMAEKVMSK 497
Query: 335 LIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLS 394
++EL P D G +++L+N+YA A W V +++ + D +KKS A SW++V + H F++
Sbjct: 498 ILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDREVHTFMA 557
Query: 395 GDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGL 454
GD SHP EI+ L L ++K GY P T V D++ ++K + + HSE+LAIA+ L
Sbjct: 558 GDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFVLQDLDEEKKISSLYYHSEKLAIAYAL 617
Query: 455 INTPDGTRLL-ITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
T T + I KNL++C DCH IKF+S +T R+I RD R+HHFK G+CSC DYW
Sbjct: 618 WKTIGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 155/330 (46%), Gaps = 37/330 (11%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L KL+ Y C L A +LFD +P R++ WN +I ++ +G + A+E Y
Sbjct: 31 GFSY-SFLGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGKSKEAVEFY 89
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWET-DVFVGAALIDMYAK 120
+L G++PD +TF KA S L I G+R H + E D FV +AL+DMYAK
Sbjct: 90 GNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAK 149
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
+ +A VF ++LE+D P+E TL +
Sbjct: 150 FDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACI 209
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ ++ L G+ +HG + E V +T+L+ MY++C +++ + +F QL
Sbjct: 210 LINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQ 269
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V+W + + G +G A+ +F +M + + P+ T +L ACS + + G +
Sbjct: 270 VTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQ-IHA 328
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
+ +D + +++L G G +D+A
Sbjct: 329 ITMKLGLDGNKYAGAALINLYGKCGNMDKA 358
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 140/309 (45%), Gaps = 37/309 (11%)
Query: 4 GFHPVLA--TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G V+A T L+ +YS C+ + ++ ++F+++ N W + NG EVA+ ++
Sbjct: 233 GLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIF 292
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ + P+ FT L+ACS+L+ +E G +IH ++ + + + GAALI++Y KC
Sbjct: 293 REMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKC 352
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ AR VFD + E D P+ T ++++
Sbjct: 353 GNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISIL 412
Query: 149 SASADIAALPQGRELHG-FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
A + + +G ++ H EL + T ++D+ + ++ A L E++R V
Sbjct: 413 LACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDV 472
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
V W ++ +HG A + K+ + D T + + + + G +++ + +S
Sbjct: 473 VLWRTLLNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQ-VIEMKST 531
Query: 268 VRDYHIDPS 276
+RD + S
Sbjct: 532 IRDLKLKKS 540
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 140/338 (41%), Gaps = 72/338 (21%)
Query: 93 RRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD-------------- 138
R +H +VI++ + F+G LID Y KC + AR++FD++ R
Sbjct: 21 RAVHTNVIKSGFSYS-FLGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISH 79
Query: 139 -------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFE-LNVKV 178
P T + A + + + G+ HG + E L+ V
Sbjct: 80 GKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFV 139
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-V 237
+ALVDMYAK ++ A +F ++ EK VV + A+I GYA HG +AL +FE M + V
Sbjct: 140 ASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGV 199
Query: 238 QPDHITFVGVLSACSRGGLFDEGRMF--------FESMV-----------RDYHIDPSVQ 278
+P+ T +L C G G++ ES+V R I+ S++
Sbjct: 200 KPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIK 259
Query: 279 HY-----------TCMVDLLGHSGRLDEACDLIMQM---RVKPDPGVWGALLNSCKLHGH 324
+ T V L +GR + A + +M + P+P ++L +C
Sbjct: 260 VFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAM 319
Query: 325 VKLAELALEKLIELEPHDAGNY--VILSNIYARAANWE 360
+++ E ++L D Y L N+Y + N +
Sbjct: 320 LEVGEQIHAITMKLGL-DGNKYAGAALINLYGKCGNMD 356
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 146 TVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREK 205
++I+ SA +L R +H + F + + L+D Y KCG + AR LF++L +
Sbjct: 6 SLIAQSAHTKSLTTLRAVHTNVIKSGFSYSF-LGHKLIDGYIKCGSLAEARKLFDELPSR 64
Query: 206 RVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR 261
+V+WN+MI+ + HG S +A++ + M E V PD TF + A S+ GL G+
Sbjct: 65 HIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQ 121
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 5/141 (3%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G + L++LY C + A +FD + + ++ N +I AYA NG A+EL
Sbjct: 333 LGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALEL 392
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVG--AALIDMY 118
+ RL +GLVP+ TF L AC+ +EEG +I IRN ++ + +ID+
Sbjct: 393 FERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFAS-IRNNHNIELTIDHFTCMIDLL 451
Query: 119 AKCSCVVNARQVFDKILERDP 139
+ + A + +++ R+P
Sbjct: 452 GRSRRLEEAAMLIEEV--RNP 470
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 202/549 (36%), Positives = 310/549 (56%), Gaps = 75/549 (13%)
Query: 39 FLWNVLIRAYAWN-GPYE--VAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRI 95
F+WN++IRA N P + I +Y+R+ + PD TFPF L + + G+R
Sbjct: 24 FVWNIIIRAIVHNVSPPQRHSPISVYFRMRHHCVSPDFHTFPFLLPSFHNPIHLPLGQRT 83
Query: 96 HEDVIRNKWETDVFVGAALIDMYAKC---------------------SCVVNA------- 127
H ++ + D FV +L++MY+ C + VVNA
Sbjct: 84 HAQILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAGLI 143
Query: 128 ---RQVFDKILERD--------------------------------------PSEATLVT 146
R++FD++ ER+ P++ T+ T
Sbjct: 144 NHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMST 203
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V+SA + AL QG+ +H + ++ E+++ + TAL+DMYAKCG ++ A+ +F+ L K+
Sbjct: 204 VLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSKK 263
Query: 207 -VVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMF 263
V +++AMI AM+G + + +F +M + + P+ +TFVG+L AC GL ++G+ +
Sbjct: 264 DVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILGACVHRGLINKGKSY 323
Query: 264 FESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
F+ M ++ I PS+QHY CMVDL G SG + EA I M ++PD +WG+LL+ ++ G
Sbjct: 324 FKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 383
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
+K E AL++LIEL+P ++G YV+LSN+YA+ W V ++R M +GIKK CS++
Sbjct: 384 DIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWIEVKRIRHEMEVKGIKKVPGCSYV 443
Query: 384 EVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICC 443
EV+ H F+ GD S + IYA L+ + R++EAGYV T+ V D+E +K +
Sbjct: 444 EVEGVVHEFVVGDESQQESERIYAMLEEIMQRLREAGYVSDTKEVLLDLEEKDKEMALSY 503
Query: 444 HSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKD 503
HSE+LAIAF L+ T GT + I KNL+IC DCH+ +K ISK+ REI VRD NR+HHF D
Sbjct: 504 HSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFSD 563
Query: 504 GICSCGDYW 512
G CSC D+W
Sbjct: 564 GSCSCRDFW 572
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 195/546 (35%), Positives = 296/546 (54%), Gaps = 35/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+ +Y+ C + A +F+ + ++ WN +I Y +G A++L+
Sbjct: 337 GFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLF 396
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ + D+ T+ + + L+ ++ G+ +H + I++ D+ V ALIDMYAKC
Sbjct: 397 KMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKC 456
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
V ++ ++F + D P AT + +
Sbjct: 457 GEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTL 516
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A +AA G+E+H R +E +++ AL++MY+KCG ++ + +FE++ + VV
Sbjct: 517 PMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVV 576
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W MI Y M+G KAL+ F M K + PD + F+ ++ ACS GL DEG FE M
Sbjct: 577 TWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKM 636
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
Y IDP ++HY C+VDLL S ++ +A + I M +KPD +W ++L +C+ G ++
Sbjct: 637 KTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMET 696
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE ++IEL P D G ++ SN YA W+ V+ +RK + D+ I K+ SWIEV
Sbjct: 697 AERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGK 756
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDV-ENDEKANMICCHSE 446
H F SGD S P + IY L+ L M + GY+P V ++ E +EK +IC HSE
Sbjct: 757 NVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSE 816
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
RLAIAFGL+NT GT L + KNL++C DCH K ISKI REI VRD NR+H FKDG C
Sbjct: 817 RLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTC 876
Query: 507 SCGDYW 512
SC D W
Sbjct: 877 SCKDRW 882
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 202/423 (47%), Gaps = 44/423 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRI-PQRNLFLWNVLIRAYAWNGPYEVAIE 59
+G + KL+ YS ++ +F R+ P +N++LWN +IRA++ NG + A+E
Sbjct: 33 LGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALE 92
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
Y +L E + PD +TFP +KAC+ L E G ++E ++ +E+D+FVG AL+DMY+
Sbjct: 93 FYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYS 152
Query: 120 KCSCVVNARQVFDKILERD---------------------------------PSEATLVT 146
+ + ARQVFD++ RD P T+ +
Sbjct: 153 RMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSS 212
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V+ A ++ + QG+ LHGF+ + V V LV MY K AR +F+++ +
Sbjct: 213 VLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRD 272
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
VS+N MI GY +++ +F + D+ +PD +T VL AC + +
Sbjct: 273 SVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNY 332
Query: 267 MVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
M++ + ++ +V++ ++D+ G + A D+ M K D W ++++ G +
Sbjct: 333 MLKAGFVLESTVRN--ILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGDL 389
Query: 326 KLAELALEKLIELEPH-DAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIE 384
A + ++ +E D Y++L ++ R A+ K K + GIK I C +
Sbjct: 390 MEAMKLFKMMMIMEEQADHITYLMLISVSTRLADL----KFGKGLHSNGIKSGI-CIDLS 444
Query: 385 VKN 387
V N
Sbjct: 445 VSN 447
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 170/357 (47%), Gaps = 37/357 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
MGF + LV +YS L A Q+FD +P R+L WN LI Y+ +G YE A+E+
Sbjct: 135 MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEI 194
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
Y+ L +VPD+FT L A L +++G+ +H +++ + V V L+ MY K
Sbjct: 195 YHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLK 254
Query: 121 CSCVVNARQVFDKILERD--------------------------------PSEATLVTVI 148
+AR+VFD++ RD P T+ +V+
Sbjct: 255 FRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVL 314
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A + L + ++ + + F L V+ L+D+YAKCG + AR++F + K V
Sbjct: 315 RACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTV 374
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
SWN++I+GY G +A+ LF+ M E Q DHIT++ ++S +R G+ +
Sbjct: 375 SWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNG 434
Query: 268 VRD-YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
++ ID SV + ++D+ G + ++ + M D W ++++C G
Sbjct: 435 IKSGICIDLSVSN--ALIDMYAKCGEVGDSLKIFSSMGTG-DTVTWNTVISACVRFG 488
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 35/209 (16%)
Query: 77 PFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY------------------ 118
PF +A S+ S + E RRIH VI ++ F LID Y
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 119 --------------AKCSCVVNARQVFDKILER--DPSEATLVTVISASADIAALPQGRE 162
+K A + + K+ E P + T +VI A A + G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 163 LHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGH 222
++ FE ++ V ALVDMY++ GL+ AR +F+++ + +VSWN++I+GY+ HG+
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 223 STKALDLFEKMKDE-VQPDHITFVGVLSA 250
+AL+++ ++K+ + PD T VL A
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPA 216
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 197/542 (36%), Positives = 307/542 (56%), Gaps = 40/542 (7%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
+ L+ +Y C + A + FDR P++++ W +I AYA N A+EL R+ G+
Sbjct: 172 SSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIK 231
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWE-TDVFVGAALIDMYAKCSCVVNARQ 129
T+ L AC++ + G H+ + + V L+++Y KC V +AR+
Sbjct: 232 LGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARR 291
Query: 130 VFDKILER---------------------------------DPSEATLVTVISASADIAA 156
V D + R +PS+ TL++V+ + A +
Sbjct: 292 VLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGT 351
Query: 157 LPQGRELHG-FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFE--QLREKRVVSWNAM 213
L G+ +H F ++ + A++ MY KCG +++AR +FE LR + VV+W AM
Sbjct: 352 LSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAM 411
Query: 214 ITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
I YA +G +A++LF++M +P+ +TF+ VL ACS G ++ F SM D+
Sbjct: 412 IRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDF 471
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR-VKPDPGVWGALLNSCKLHGHVKLAEL 330
+ P+ HY C+VDLLG +GRL EA L+++ + + D W A L++C+++G ++ ++
Sbjct: 472 GVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQR 531
Query: 331 ALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAH 390
A +++ ELEP + V+LSN+YA VA++R M G+KK SWIE+ N+ H
Sbjct: 532 AAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVH 591
Query: 391 AFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAI 450
F+ D SHP EIY++L+ L +KEAGYVP T+ V DV+ ++K ++ HSERLA+
Sbjct: 592 EFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKVQLLGYHSERLAM 651
Query: 451 AFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGD 510
A G+I+TP GT L + KNL++C DCH A KFIS+I R+I VRD +R+HHFKDG+CSCGD
Sbjct: 652 ALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGD 711
Query: 511 YW 512
YW
Sbjct: 712 YW 713
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 162/366 (44%), Gaps = 39/366 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L LV YS LH A F RI N WN+L+ AYA NG A L++ + G
Sbjct: 69 LGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQG 128
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P+ T AL AC+A + GR+++E + E D V ++LI MY +C + A
Sbjct: 129 VRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAE 188
Query: 129 QVFDKILERD----------------PSEA-----------------TLVTVISASADIA 155
+ FD+ E+D S A T V+++ A A
Sbjct: 189 RAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTM 248
Query: 156 ALPQGRELHGFSWRHRFELNVK-VKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
L G H + + + V LV++Y KCG V AR + + + + VSW AMI
Sbjct: 249 DLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMI 308
Query: 215 TGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
YA +G++ +A++LF+ M E +P IT + V+ +C+ G G+ +
Sbjct: 309 AAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSF 368
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGV-WGALLNSCKLHGHVKLAELAL 332
S+ ++ + G G L+ A ++ + ++ V W A++ + +G + E A+
Sbjct: 369 SQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNG---VGEEAI 425
Query: 333 EKLIEL 338
E E+
Sbjct: 426 ELFQEM 431
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 4/143 (2%)
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
L + R+LH + + N + LVD Y+K G + A+ F ++ SWN ++
Sbjct: 47 GLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMA 106
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD-YHI 273
YA +GH A LF M + V+P+ +T L AC+ GR E + + I
Sbjct: 107 AYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEI 166
Query: 274 DPSVQHYTCMVDLLGHSGRLDEA 296
D V+ + ++ + G ++EA
Sbjct: 167 DSHVE--SSLITMYGRCREIEEA 187
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 204/573 (35%), Positives = 315/573 (54%), Gaps = 80/573 (13%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T +V Y+ L A + FD +P+R++ WN ++ YA NG E + L+ ++ G+
Sbjct: 198 TAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIE 257
Query: 71 PDNFTFPFALKACSALS----AIEEGRRIHEDVIRNKWETDVFVGAALIDM--------- 117
PD T+ + ACS+ A R +H+ I + + FV AL+DM
Sbjct: 258 PDETTWVTVISACSSRGDPCLAASLVRTLHQKQI----QLNCFVRTALLDMYAKCGSIGA 313
Query: 118 -----------------------YAKCSCVVNARQVFDKILERD---------------- 138
Y + + +AR++F+ + R+
Sbjct: 314 ARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQ 373
Query: 139 ------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
P E T+V+VISA + AL G + F ++ +L++
Sbjct: 374 SAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHN 433
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQP 239
A++ MY++CG ++ A+ +F+++ + VVS+N +I+G+A HGH +A++L MK+ ++P
Sbjct: 434 AMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEP 493
Query: 240 DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
D +TF+GVL+ACS GL +EGR FES+ DP++ HY CMVDLLG G L++A
Sbjct: 494 DRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRT 548
Query: 300 IMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANW 359
+ +M ++P GV+G+LLN+ ++H V+L ELA KL ELEP ++GN+++LSNIYA A W
Sbjct: 549 MERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRW 608
Query: 360 EGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEA 419
+ V ++R+ M G+KK+ SW+E K H F+ D SH D+IY L L +M+EA
Sbjct: 609 KDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREA 668
Query: 420 GYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAI 479
GY+ V DVE +EK ++ HSE+LAI + L+ + G + + KNL++C DCH AI
Sbjct: 669 GYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAI 728
Query: 480 KFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
K ISK+ R I VRD NR+H F DG+CSC DYW
Sbjct: 729 KMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 153/309 (49%), Gaps = 17/309 (5%)
Query: 24 HNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKAC 83
H H LF+ N+F++ ++R Y+ + + ++ + G+ PD F +P +K
Sbjct: 51 HYTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIK-- 108
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEAT 143
SA G H V++ +D FV A+IDMYA+ + +AR+VFD+I + + A
Sbjct: 109 ---SAGNGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVAD 165
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
++S + Q + L E NV TA+V YAK ++ AR F+ +
Sbjct: 166 WNAMVSGYWKWESEGQAQWLFDV----MPERNVITWTAMVTGYAKVKDLEAARRYFDCMP 221
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRM 262
E+ VVSWNAM++GYA +G + + L LF++M + ++PD T+V V+SACS G
Sbjct: 222 ERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRG----DPC 277
Query: 263 FFESMVRDYH---IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC 319
S+VR H I + T ++D+ G + A + ++ + W A++++
Sbjct: 278 LAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAY 337
Query: 320 KLHGHVKLA 328
G++ A
Sbjct: 338 TRVGNLDSA 346
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 155/394 (39%), Gaps = 112/394 (28%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRI--------------------------- 33
+G G + ++ +Y+ + +A ++FD I
Sbjct: 124 LGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQ 183
Query: 34 ------PQRNLFLW-------------------------------NVLIRAYAWNGPYEV 56
P+RN+ W N ++ YA NG E
Sbjct: 184 WLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEE 243
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALS----AIEEGRRIHEDVIRNKWETDVFVGA 112
+ L+ ++ G+ PD T+ + ACS+ A R +H+ I + + FV
Sbjct: 244 VLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQI----QLNCFVRT 299
Query: 113 ALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
AL+DMYAKC + AR++FD++ G + +W
Sbjct: 300 ALLDMYAKCGSIGAARRIFDEL-------------------------GAYRNSVTW---- 330
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
A++ Y + G + AR LF + + VV+WN+MI GYA +G S A++LF++
Sbjct: 331 -------NAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKE 383
Query: 233 M--KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
M ++ PD +T V V+SAC G + G + + I S+ + M+ +
Sbjct: 384 MITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTEN-QIKLSISGHNAMIFMYSRC 442
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
G +++A + +M + D + L++ HGH
Sbjct: 443 GSMEDAKRVFQEMATR-DVVSYNTLISGFAAHGH 475
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/505 (37%), Positives = 291/505 (57%), Gaps = 34/505 (6%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ + LV LY+ C + A +FD +P R++ WN ++ AY N Y+ + L+ ++ G
Sbjct: 270 VCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKG 329
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ D T+ + C E+ ++M K
Sbjct: 330 VEADEATWNAVIGGCMENGQTEKA----------------------VEMLRKM------- 360
Query: 129 QVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
+ L P++ T+ + + A + + +L G+E+H + +RH ++ TALV MYAK
Sbjct: 361 ----QNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAK 416
Query: 189 CGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGV 247
CG + ++RN+F+ + K VV+WN MI AMHG+ + L LFE M + ++P+ +TF GV
Sbjct: 417 CGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGV 476
Query: 248 LSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
LS CS L +EG F SM RD+ ++P HY CMVD+ +GRL EA + I +M ++P
Sbjct: 477 LSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEP 536
Query: 308 DPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRK 367
WGALL +C+++ +V+LA+++ KL E+EP++ GNYV L NI A W ++ R
Sbjct: 537 TASAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARI 596
Query: 368 LMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTES 427
LM +RGI K+ CSW++V ++ H F+ GD ++ D+IY L L +MK AGY P T+
Sbjct: 597 LMKERGITKTPGCSWLQVGDRVHTFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDTDY 656
Query: 428 VFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITE 487
V D++ +EKA +C HSE+LA+AFG++N + + + KNL+IC DCH AIK++SK+
Sbjct: 657 VLQDIDQEEKAESLCSHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYVSKVVG 716
Query: 488 REITVRDVNRYHHFKDGICSCGDYW 512
I VRD R+HHF++G CSC D W
Sbjct: 717 VTIIVRDSLRFHHFRNGNCSCQDLW 741
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 127/264 (48%), Gaps = 34/264 (12%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A QLFD IPQ + + LI A+ G AI LY L G+ P N F KAC A
Sbjct: 85 AQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGA 144
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
+ +H+D IR +D F+G ALI Y KC CV AR+VFD ++ +D
Sbjct: 145 SGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSM 204
Query: 139 --------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
P+ TL +++ A +++ L GR +HGF+ RH
Sbjct: 205 SSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGM 264
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
NV V +ALV +YA+C VK AR +F+ + + VVSWN ++T Y + K L LF +
Sbjct: 265 IENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQ 324
Query: 233 MKDE-VQPDHITFVGVLSACSRGG 255
M + V+ D T+ V+ C G
Sbjct: 325 MSSKGVEADEATWNAVIGGCMENG 348
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 155/349 (44%), Gaps = 46/349 (13%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
L L+H Y C C+ A ++FD + +++ W + Y G + + ++ + G
Sbjct: 169 LGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNG 228
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
+ P++ T L ACS L ++ GR IH +R+ +VFV +AL+ +YA+C V AR
Sbjct: 229 VKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQAR 288
Query: 129 QVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAK 188
VFD + RD V+S + + A RE Y K
Sbjct: 289 LVFDLMPHRD--------VVSWNGVLTAYFTNRE-----------------------YDK 317
Query: 189 CGLVKVARNLFEQLREKRV----VSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHIT 243
GL LF Q+ K V +WNA+I G +G + KA+++ KM++ +P+ IT
Sbjct: 318 -GLA-----LFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQIT 371
Query: 244 FVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQM 303
L ACS G+ + R + I + T +V + G L+ + + + M
Sbjct: 372 ISSFLPACSILESLRMGKEVHCYVFRHWLIG-DLTTMTALVYMYAKCGDLNLSRN-VFDM 429
Query: 304 RVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHDAGNYVILS 350
+ D W ++ + +HG+ + L E +++ ++P+ +LS
Sbjct: 430 ICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLS 478
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 119/305 (39%), Gaps = 37/305 (12%)
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
VP N L+ A + + RR + + N + D + LI + A +
Sbjct: 60 VPTNIPSHLGLRLLKAALNVGDFRRAQQ-LFDNIPQPDPTTCSTLISAFTTRGLPNEAIR 118
Query: 130 VFDKILER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYA 187
++ + R P + +TV A + +E+H + R + + AL+ Y
Sbjct: 119 LYASLRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYG 178
Query: 188 KCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVG 246
KC V+ AR +F+ L K VVSW +M + Y G L +F +M + V+P+ +T
Sbjct: 179 KCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSS 238
Query: 247 VLSACSRGGLFDEGRMFFESMVRDYHIDP---------------SVQHYTCMVDLLGH-- 289
+L ACS GR VR I+ SV+ + DL+ H
Sbjct: 239 ILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRD 298
Query: 290 ----SGRL---------DEACDLIMQMR---VKPDPGVWGALLNSCKLHGHVKLAELALE 333
+G L D+ L QM V+ D W A++ C +G + A L
Sbjct: 299 VVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLR 358
Query: 334 KLIEL 338
K+ L
Sbjct: 359 KMQNL 363
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 207/513 (40%), Positives = 292/513 (56%), Gaps = 29/513 (5%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG---- 68
+V S + A +F +P RN WN ++ +A + A E + E G
Sbjct: 166 MVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVL 225
Query: 69 ---LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN--KWETDVFVGAALIDMYAKCSC 123
+V +KA A+ +RN W A++ Y K S
Sbjct: 226 WTAMVSGYMDIGNVVKAIEYFEAMP---------VRNLVSWN-------AVVAGYVKNSH 269
Query: 124 VVNARQVFDKILER---DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
+A ++F ++ P+ +TL +V+ ++++AL G+++H + + N+ V T
Sbjct: 270 ADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGT 329
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQP 239
+LV MY KCG + A LF ++ + VV+WNAMI+GYA HG +A++LFE+MKDE V+P
Sbjct: 330 SLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEP 389
Query: 240 DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
+ ITFV VL+AC GL D G FE M Y I+P V HY+CMVDLL +G+L+ A DL
Sbjct: 390 NWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDL 449
Query: 300 IMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANW 359
I M +P P +G LL +C+++ +++ AELA KLIE +P AG YV L+NIYA A W
Sbjct: 450 IRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQW 509
Query: 360 EGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEA 419
+ V+++R+ M D + K+ SWIE+K H F S D HP I+ KL L RMK
Sbjct: 510 DDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAM 569
Query: 420 GYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAI 479
GYVP + V HDV+ K M+ HSE+LAI+FGLI+T G L I KNL++C DCH A
Sbjct: 570 GYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHNAA 629
Query: 480 KFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
K ISKI +REI +RD R+HHF+ G CSCGDYW
Sbjct: 630 KVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 662
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+ T LV +Y C L +A +LF + R++ WN +I YA +G + AI L+ R+ +
Sbjct: 326 TVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDE 385
Query: 68 GLVPDNFTFPFALKAC 83
G+ P+ TF L AC
Sbjct: 386 GVEPNWITFVAVLTAC 401
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 203/586 (34%), Positives = 315/586 (53%), Gaps = 81/586 (13%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL--- 64
VL ++ LY C A +LF+ + + ++ WN++I AY G E +++++ RL
Sbjct: 426 VLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYK 485
Query: 65 ----------------------------LEIGLVPDNFTFPFALKACSALSAIEEGRRIH 96
+E G TF AL S+LS +E GR++H
Sbjct: 486 DVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLH 545
Query: 97 EDVIRNKWETDVFVGAALIDMYAKCSCVVNA------------RQVFDKILERDPSEA-- 142
V++ +++D F+ ++L++MY KC + A R+ ++ ++P
Sbjct: 546 GMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIV 605
Query: 143 -----------------------------------TLVTVISASADIAALPQGRELHGFS 167
T+ T+ISA A+ L GR +H +
Sbjct: 606 SWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYV 665
Query: 168 WRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKAL 227
+ ++ V ++L+DMY+K G + A +F Q E +V W +MI+GYA+HG A+
Sbjct: 666 QKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAI 725
Query: 228 DLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDL 286
LFE+M ++ + P+ +TF+GVL+ACS GL +EG +F M Y I+P V+H T MVDL
Sbjct: 726 GLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDL 785
Query: 287 LGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNY 346
G +G L + + I + + VW + L+SC+LH +V++ + E L+++ P D G Y
Sbjct: 786 YGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAY 845
Query: 347 VILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIY 406
V+LSN+ A W+ A++R LM RG+KK SWI++K++ H F+ GD SHP DEIY
Sbjct: 846 VLLSNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQDDEIY 905
Query: 407 AKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLIT 466
+ L L GR+KE GY + V DVE ++ +I HSE+LA+ FG+INT + T + I
Sbjct: 906 SYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRII 965
Query: 467 KNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
KNL+IC DCH IK+ S++ +REI VRD++R+HHFK G CSCGDYW
Sbjct: 966 KNLRICTDCHNFIKYASQLLDREIIVRDIHRFHHFKHGSCSCGDYW 1011
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 129/288 (44%), Gaps = 39/288 (13%)
Query: 10 ATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGL 69
A L+ LY+ + + +A +LFD IPQRN W +LI +A G E+ L+ + G
Sbjct: 327 ANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGA 386
Query: 70 VPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQ 129
P+ +T LK CS + ++ G+ +H ++RN + DV +G +++D+Y KC A +
Sbjct: 387 CPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAER 446
Query: 130 VFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC 189
+F+ + E D SW ++ Y +
Sbjct: 447 LFELMNEGDV--------------------------VSW-----------NIMIGAYLRA 469
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALD-LFEKMKDEVQPDHITFVGVL 248
G V+ + ++F +L K VVSWN ++ G G+ AL+ L+ ++ + +TF L
Sbjct: 470 GDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIAL 529
Query: 249 SACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
S + GR MV + D + +V++ GR+D+A
Sbjct: 530 ILASSLSHVELGRQ-LHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKA 576
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 196/524 (37%), Positives = 302/524 (57%), Gaps = 34/524 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
L L++ YS C + A Q+FD + +R+L WN +I Y N A++++ +
Sbjct: 89 TLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNE 148
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G FT L AC E +++H ++ + +++VG AL+D+YAKC + +A
Sbjct: 149 GFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDA 208
Query: 128 RQVFDKILER---------------------------------DPSEATLVTVISASADI 154
QVF+ + ++ + ++ TL +VI A +++
Sbjct: 209 VQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNL 268
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
AAL +G+++H + F NV V ++ VDMYAKCG ++ + +F +++EK + WN +I
Sbjct: 269 AALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTII 328
Query: 215 TGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
+G+A H + + LFEKM+ D + P+ +TF +LS C GL +EGR FF+ M Y +
Sbjct: 329 SGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGL 388
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P+V HY+CMVD+LG +G L EA +LI + P +WG+LL SC+++ +++LAE+A E
Sbjct: 389 SPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAE 448
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
KL ELEP +AGN+V+LSNIYA WE +AK RKL+ D +KK SWI++K+K H F
Sbjct: 449 KLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFS 508
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
G++ HP EI + L L + ++ GY P E HDVE +K ++ HSE+LA+ FG
Sbjct: 509 VGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFG 568
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNR 497
L+ P+ + + I KNL+IC DCH +K S T R I VRDVNR
Sbjct: 569 LMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNR 612
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 145/307 (47%), Gaps = 38/307 (12%)
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDP 139
L+ C+ A+ E + H +IR E DV + LI+ Y+KC V ARQVFD +LER
Sbjct: 60 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL 119
Query: 140 ---------------------------------SEATLVTVISASADIAALPQGRELHGF 166
SE T+ +V+SA + ++LH
Sbjct: 120 VSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCL 179
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
S + +LN+ V TAL+D+YAKCG++K A +FE +++K V+W++M+ GY + + +A
Sbjct: 180 SVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEA 239
Query: 227 LDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
L L+ + + ++ + T V+ ACS EG+ +++ +V + VD
Sbjct: 240 LLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ-MHAVICKSGFGSNVFVASSAVD 298
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE--LEPHDA 343
+ G L E+ + +++ K + +W +++ H K + EK+ + + P++
Sbjct: 299 MYAKCGSLRESYIIFSEVQEK-NLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV 357
Query: 344 GNYVILS 350
+LS
Sbjct: 358 TFSSLLS 364
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
++ A A+ + + HG R E +V + L++ Y+KCG V++AR +F+ + E+
Sbjct: 59 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFE 265
+VSWN MI Y + ++ALD+F +M++E + T VLSAC E +
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 178
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
V+ ID ++ T ++DL G + +A + M+ K W +++
Sbjct: 179 LSVKTC-IDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSV-TWSSMV 227
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 81/152 (53%), Gaps = 6/152 (3%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNG-PYEVAIEL 60
GFG + +A+ V +Y+ C L ++ +F + ++NL LWN +I +A + P EV I L
Sbjct: 285 GFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMI-L 343
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKW--ETDVFVGAALIDMY 118
+ ++ + G+ P+ TF L C +EEGRR + ++R + +V + ++D+
Sbjct: 344 FEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFK-LMRTTYGLSPNVVHYSCMVDIL 402
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISA 150
+ + A ++ K + DP+ + +++++
Sbjct: 403 GRAGLLSEAYELI-KSIPFDPTASIWGSLLAS 433
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 207/513 (40%), Positives = 292/513 (56%), Gaps = 29/513 (5%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG---- 68
+V S + A +F +P RN WN ++ +A + A E + E G
Sbjct: 117 MVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVL 176
Query: 69 ---LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN--KWETDVFVGAALIDMYAKCSC 123
+V +KA A+ +RN W A++ Y K S
Sbjct: 177 WTAMVSGYMDIGNVVKAIEYFEAMP---------VRNLVSWN-------AVVAGYVKNSH 220
Query: 124 VVNARQVFDKILER---DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
+A ++F ++ P+ +TL +V+ ++++AL G+++H + + N+ V T
Sbjct: 221 ADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGT 280
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQP 239
+LV MY KCG + A LF ++ + VV+WNAMI+GYA HG +A++LFE+MKDE V+P
Sbjct: 281 SLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEP 340
Query: 240 DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
+ ITFV VL+AC GL D G FE M Y I+P V HY+CMVDLL +G+L+ A DL
Sbjct: 341 NWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDL 400
Query: 300 IMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANW 359
I M +P P +G LL +C+++ +++ AELA KLIE +P AG YV L+NIYA A W
Sbjct: 401 IRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQW 460
Query: 360 EGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEA 419
+ V+++R+ M D + K+ SWIE+K H F S D HP I+ KL L RMK
Sbjct: 461 DDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAM 520
Query: 420 GYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAI 479
GYVP + V HDV+ K M+ HSE+LAI+FGLI+T G L I KNL++C DCH A
Sbjct: 521 GYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTAPGMTLRIFKNLRVCGDCHNAA 580
Query: 480 KFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
K ISKI +REI +RD R+HHF+ G CSCGDYW
Sbjct: 581 KVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 613
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
+ T LV +Y C L +A +LF + R++ WN +I YA +G + AI L+ R+ +
Sbjct: 277 TVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDE 336
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHE 97
G+ P+ TF L AC + G R E
Sbjct: 337 GVEPNWITFVAVLTACIHTGLCDFGIRCFE 366
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 195/559 (34%), Positives = 302/559 (54%), Gaps = 56/559 (10%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ L+ YS C + A ++F+R+ R++ WN ++ Y N +++ R++ G
Sbjct: 364 ITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSG 423
Query: 69 LVPDNFT----FPFALKACSALSAIEEGRRIHEDVIR--NKWETDVFVGAALIDMYAKCS 122
+ PD+ + F A + S L G+ IH ++R + V A++ MYAK +
Sbjct: 424 IEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFN 483
Query: 123 CVVNARQVFDKILERDP---------------------------------SEATLVTVIS 149
+ +A ++F + RD +L +++
Sbjct: 484 RIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLT 543
Query: 150 ASADIAALPQGRELH--------GFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQ 201
+ + +L G++ H G H+ L + + AL+ MY+KCG +K A +F +
Sbjct: 544 SCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSL-LSINNALISMYSKCGSIKDAAQVFLK 602
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEG 260
+ K V SW AMITG A HG + +AL LFE+MK D ++P+ +TF+ +L AC+ GGL EG
Sbjct: 603 MERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEG 662
Query: 261 RMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP------GVWGA 314
+F+SM DY + PS++HY CM+DL G SG+ D A L+ P +W
Sbjct: 663 SYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWKV 722
Query: 315 LLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGI 374
LL +C + L A K++ELEP D Y++L+N+YA + WE K+RK M D+G+
Sbjct: 723 LLGACHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAMRDKGL 782
Query: 375 KKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVEN 434
+K + CSWI+ N+ H F++GD HP EIY KL L + GYVP TE V HDV+
Sbjct: 783 RKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLNYSCRRMGYVPMTELVLHDVDE 842
Query: 435 DEKANMICCHSERLAIAFGLINTPDGTRLL-ITKNLKICDDCHIAIKFISKITEREITVR 493
EK ++ CHSE+LA++FGL+N G ++ + KNL++C+DCH +KF S + +REI +R
Sbjct: 843 TEKEAILGCHSEKLAVSFGLLNCGVGNGVIRVMKNLRVCEDCHSWMKFASLLEKREILLR 902
Query: 494 DVNRYHHFKDGICSCGDYW 512
D R+H F+DG CSCGDYW
Sbjct: 903 DSQRFHLFRDGSCSCGDYW 921
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 172/379 (45%), Gaps = 55/379 (14%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI- 67
L LV Y C L +A QLF+RI ++++ WN +I A G E A+ L+ R+L++
Sbjct: 261 LWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVE 320
Query: 68 -GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
+ P+ TF L A S LSA+ GR IH + R E D + +LI Y+KC V
Sbjct: 321 PPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGK 380
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISA--- 150
AR++F+++L RD P +L + +A
Sbjct: 381 AREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASR 440
Query: 151 -SADIAALPQGRELHGFSWRHRFE--LNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
S+ + +G+E+HG+ R +++ V A++ MYAK + A +F+ ++ +
Sbjct: 441 DSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDS 500
Query: 208 VSWNAMITGYAMHGHSTKALDLF-EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
SWNAM+ GY+ + L +F + +K DH++ +L++C R G+ F
Sbjct: 501 YSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAV 560
Query: 267 MVRDY------HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCK 320
+ + + H D + ++ + G + +A + ++M K D W A++ C
Sbjct: 561 VAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERK-DVFSWTAMITGCA 619
Query: 321 LHGHVKLAELALEKLIELE 339
HG LA+E L E
Sbjct: 620 HHG------LAVEALQLFE 632
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 173/363 (47%), Gaps = 52/363 (14%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEVAIE 59
GFG + + +YS C L +A ++FD ++ LWN +I AY ++G + +
Sbjct: 151 GFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLR 210
Query: 60 LYYRLLEIGLV-PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWE-TDVFVGAALIDM 117
L+ +++ +G+V P T+ + AC + + G +H +I+ E T+++ +L+
Sbjct: 211 LFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEATNLW--NSLVTF 268
Query: 118 YAKCSCVVNARQVFDKILERD-----------------------------------PSEA 142
Y KC + +A Q+F++I +D P+
Sbjct: 269 YGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRV 328
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
T ++++SA + ++AL GRE+H +R E++ + +L+ Y+KC V AR +FE+L
Sbjct: 329 TFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERL 388
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSR--GGL--F 257
+ ++SWN+M+ GY + + D+F++M ++PD + + +A SR GL F
Sbjct: 389 LLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYF 448
Query: 258 DEGRMFFESMVRDYHIDP---SVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGA 314
G+ ++R I P S+ ++ + R+ +A + M+ + D W A
Sbjct: 449 RRGKEIHGYILR--RITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNR-DSYSWNA 505
Query: 315 LLN 317
+++
Sbjct: 506 MMD 508
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 141/317 (44%), Gaps = 41/317 (12%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F F +K + S + L A QLFD P R++ W+ LI AY+ G + A L+
Sbjct: 51 FIFRCSACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQ 110
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
+++ GL P+ F+ LK + I R++H IR + D + AA I MY++C
Sbjct: 111 KMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCG 170
Query: 123 CVVNARQVFDK--ILERD----------------------------------PSEATLVT 146
+ +A++VFD+ +L D P+E T +
Sbjct: 171 VLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYAS 230
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V++A G +HG + E + +LV Y KCG ++ A LFE++ K
Sbjct: 231 VVNACGSSGEEKYGAMVHGRIIKAGLE-ATNLWNSLVTFYGKCGNLQHASQLFERISRKD 289
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKM---KDEVQPDHITFVGVLSACSRGGLFDEGRMF 263
VVSWNAMI G AL LF +M + VQP+ +TF+ +LSA S GR
Sbjct: 290 VVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREI 349
Query: 264 FESMVR-DYHIDPSVQH 279
+ R +D S+ +
Sbjct: 350 HAHIFRLSLEVDTSITN 366
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 207/577 (35%), Positives = 313/577 (54%), Gaps = 65/577 (11%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G ++ LV +Y C + A Q+FD +NL ++N ++ Y + + +
Sbjct: 260 LGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVI 319
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+L+ G PD T + AC+ L + G+ H V+RN E + A+IDMY K
Sbjct: 320 LDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMK 379
Query: 121 C-----SCVVN--------------------------ARQVFDKILERD----------- 138
C +C V A ++FD++LERD
Sbjct: 380 CGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGAL 439
Query: 139 ---------------------PSE-ATLVTVISASADIAALPQGRELHGFSWRHRFELNV 176
P + T+V + SA + AL + + + ++ +++
Sbjct: 440 VQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDL 499
Query: 177 KVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KD 235
++ TALVDM+++CG A ++F+++ ++ V +W A I AM G++ A++LF +M +
Sbjct: 500 QLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQ 559
Query: 236 EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDE 295
+V+PD + FV +L+ACS GG D+GR F SM + + I P + HY CMVDLLG +G L+E
Sbjct: 560 KVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEE 619
Query: 296 ACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYAR 355
A DLI M ++P+ VWG+LL +C+ H +V+LA A EKL +L P G +V+LSNIYA
Sbjct: 620 AVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYAS 679
Query: 356 AANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGR 415
A W VA++R M ++G++K S IEV+ H F SGD SH I L+ + R
Sbjct: 680 AGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCR 739
Query: 416 MKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDC 475
+ EAGYVP T +V DV+ EK +++ HSE+LA+A+GLI T G + + KNL++C DC
Sbjct: 740 LSEAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTGQGIPIRVVKNLRMCSDC 799
Query: 476 HIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
H K +SK+ REITVRD NRYH FK+G CSC DYW
Sbjct: 800 HSFAKLVSKLYNREITVRDNNRYHFFKEGFCSCRDYW 836
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 189/374 (50%), Gaps = 43/374 (11%)
Query: 37 NLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIH 96
+LF++N LIR YA G + AI LY ++L +G+VPD +TFPF L ACS + A+ EG ++H
Sbjct: 94 SLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVH 153
Query: 97 EDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILER------------------- 137
V++ E D+FV +LI YA+C V R++FD +LER
Sbjct: 154 GAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSK 213
Query: 138 --------------DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALV 183
+P+ T+V VISA A + L G+++ + EL+ + ALV
Sbjct: 214 EAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALV 273
Query: 184 DMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHI 242
DMY KCG + AR +F++ K +V +N +++ Y H ++ L + ++M + +PD +
Sbjct: 274 DMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKV 333
Query: 243 TFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ 302
T + ++AC++ G G+ ++R+ ++ ++D+ G+ + AC +
Sbjct: 334 TMLSTIAACAQLGDLSVGKSSHAYVLRN-GLEGWDNISNAIIDMYMKCGKREAACKVFEH 392
Query: 303 MRVKPDPGV--WGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
M P+ V W +L+ G ++LA ++++E D ++ + + + +E
Sbjct: 393 M---PNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLE---RDLVSWNTMIGALVQVSMFE 446
Query: 361 GVAKLRKLMIDRGI 374
+L + M ++GI
Sbjct: 447 EAIELFREMQNQGI 460
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 9/176 (5%)
Query: 87 SAIEEGRRIHEDVIRNKWETD------VFVGAALIDMYAKCSCVVNARQVFDKILERD-- 138
S+++ G D RN + D +F+ LI YA A ++ ++L
Sbjct: 68 SSVQIGTLESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIV 127
Query: 139 PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNL 198
P + T ++SA + I AL +G ++HG + E ++ V +L+ YA+CG V + R L
Sbjct: 128 PDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKL 187
Query: 199 FEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSR 253
F+ + E+ VVSW ++I GY+ S +A+ LF +M + V+P+ +T V V+SAC++
Sbjct: 188 FDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAK 243
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 192/542 (35%), Positives = 311/542 (57%), Gaps = 37/542 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++ L+ Y C CL +A ++FD I + + WN LI A+A NG AIEL+ +
Sbjct: 308 MVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNA 367
Query: 68 -GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
G PD F+ L AC L + G+ H ++RN E D F+ +L+ +Y +C
Sbjct: 368 CGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESL 427
Query: 127 ARQVFDKILERD-----------------------------------PSEATLVTVISAS 151
AR +FD + E+D PS + + A
Sbjct: 428 ARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVAC 487
Query: 152 ADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
+++ A+ G+E+H F+ + + + ++++DMY+KCG V AR F++L+ K VSW
Sbjct: 488 SELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWT 547
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
MITGYA++G +A+ L++KM E ++PD T++G+L AC G+ ++G FF+ M
Sbjct: 548 VMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEMRNL 607
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
I+ ++HY C++ +L +GR +A L+ M +PD + ++L++C +HG V+L +
Sbjct: 608 PKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEVELGKK 667
Query: 331 ALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAH 390
+KL+ELEPH A +YV+ SN+YA + W+ + K+RK++ D G+ K CSWI++ K +
Sbjct: 668 VADKLLELEPHKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWIDIAGKVY 727
Query: 391 AFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAI 450
+F++G+ S P ++ LE +++ AGY P T + H++E +EK + HSE+ AI
Sbjct: 728 SFVAGENSLPEMHKVRKMWYSLEEKIRAAGYAPDTTVMLHELEEEEKVEALRWHSEKQAI 787
Query: 451 AFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGD 510
AFGL+ T T++ + KN+++C DCH A K ISK+ +REI VRD R+HHF+DG+CSCGD
Sbjct: 788 AFGLLRTAGPTKVRVFKNIRMCKDCHNAAKLISKVADREIVVRDKKRFHHFRDGLCSCGD 847
Query: 511 YW 512
YW
Sbjct: 848 YW 849
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 122/258 (47%), Gaps = 46/258 (17%)
Query: 37 NLFLWNVLIRAYAWNGPYEVAIELYYRLLEI--GLVPDNFTFPFALKACSALSAIEEGRR 94
+L WN L+ + G + A+ + RLL G+ PD FT P ALK+C ++GR+
Sbjct: 29 SLPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRG----DDGRQ 84
Query: 95 IHEDVIR-NKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD--------------- 138
+H + + D FVG +L+ MY +C V +A +VF+ + R+
Sbjct: 85 VHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPR 144
Query: 139 ------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
P EATLVTV+ A +A GR +HG + + ++ +V
Sbjct: 145 RGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSN 204
Query: 181 ALVDMYAKCGLVKVARNLFEQLRE---KRVVSWNAMITGYAMHGHSTKALDLFEKMKDE- 236
LVDMYAKCG + A F + + VVSWN M+ GYA +G + A L +M+ E
Sbjct: 205 VLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEE 264
Query: 237 --VQPDHITFVGVLSACS 252
V D IT + VL CS
Sbjct: 265 RGVPADEITMLSVLPVCS 282
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 129/293 (44%), Gaps = 53/293 (18%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P + LV +Y C + +A ++F+ + RNL WN L+ A A +EL+ LE
Sbjct: 99 PFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVA---DPRRGLELFRDCLE 155
Query: 67 -IG--LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
+G PD T L C+AL+ E GR +H +++ W+ V L+DMYAKC
Sbjct: 156 DLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGE 215
Query: 124 VVNARQVFDKILERDPS-----------------------------------------EA 142
+ +A F LE P E
Sbjct: 216 MADAECAF---LEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEI 272
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVK-VKTALVDMYAKCGLVKVARNLFEQ 201
T+++V+ + + L + RELH F R L V AL+ Y +CG + A +F+
Sbjct: 273 TMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDG 332
Query: 202 LREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEV--QPDHITFVGVLSACS 252
+ K V SWNA+I +A +G ++ A++LF +M + +PD + +L AC
Sbjct: 333 ICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACG 385
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 22/229 (9%)
Query: 160 GRELHGFSWRHRF-ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYA 218
GR++H + + + + V +LV MY +CG V A +FE + + +VSWNA++ A
Sbjct: 82 GRQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVA 141
Query: 219 MHGHSTKALDLF----EKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD-YHI 273
+ L+LF E + PD T V VL C+ + GR V+ +
Sbjct: 142 ---DPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDA 198
Query: 274 DPSVQHYTCMVDLLGHSGRL-DEACDLIMQMRVKPDPG----VWGALLNSCKLHGHVKLA 328
P V + +VD+ G + D C + P G W +L +G A
Sbjct: 199 APRVSNV--LVDMYAKCGEMADAECAFL---EAPPGAGRNVVSWNVMLGGYARNGEAGAA 253
Query: 329 ELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKL---MIDRGI 374
L ++ E + + + ++ + +AKLR+L ++ RG+
Sbjct: 254 FGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGL 302
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 194/499 (38%), Positives = 278/499 (55%), Gaps = 42/499 (8%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
LV LYS + A ++FD + +++ WN ++ Y +G + A+E++
Sbjct: 343 LVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFK---------- 392
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
P+ +N V V Y +A ++F+
Sbjct: 393 --VMPY----------------------KNDLSWMVMVSG-----YVHGGLSEDALKLFN 423
Query: 133 KILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCG 190
++ D P + T I+A ++ AL GR+LH + FE + AL+ MYAKCG
Sbjct: 424 QMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCG 483
Query: 191 LVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLS 249
V AR +F + VSWNAMI+ HGH +AL+LF++M E + PD I+F+ +L+
Sbjct: 484 AVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILT 543
Query: 250 ACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDP 309
AC+ GL DEG +FESM RD+ I P HY ++DLLG SGR+ EA DLI M +P P
Sbjct: 544 ACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTP 603
Query: 310 GVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLM 369
+W A+L+ C+ +G ++ A ++L + P G Y++LSN Y+ A W A++RKLM
Sbjct: 604 SIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLM 663
Query: 370 IDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVF 429
DRG+KK CSWIEV +K H FL GD HP E+Y L+ + RM++ GYVP T+ V
Sbjct: 664 RDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVL 723
Query: 430 HDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITERE 489
HD+E EK ++ HSE+LA+ FGL+ P G + + KNL+IC DCH A+ F+SK RE
Sbjct: 724 HDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGRE 783
Query: 490 ITVRDVNRYHHFKDGICSC 508
I VRDV R+HHFKDG CSC
Sbjct: 784 IVVRDVRRFHHFKDGECSC 802
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 143/323 (44%), Gaps = 50/323 (15%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIP--QRNLFLWNVLIRAYAWNGPYEVAIELYYRL 64
P AT LV +A L +A FD +P +R+ L N ++ A+A A+ +++ L
Sbjct: 92 PSPATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHAL 151
Query: 65 LEIG-LVPDNFTFPFALKACSALS--AIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
L G L PD+++F + A + A ++H V+++ + V ALI +Y KC
Sbjct: 152 LGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKC 211
Query: 122 SCVV---NARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKV 178
+AR+V D++ ++D +W
Sbjct: 212 DTPEASWDARKVLDEMPDKD--------------------------DLTW---------- 235
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ 238
T +V Y + G V AR++FE++ K V WNAMI+GY G A +LF +M E
Sbjct: 236 -TTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKV 294
Query: 239 P-DHITFVGVLSACSRGGLFDEGRMFFESMVR---DYHIDPSVQHYTCMVDLLGHSGRLD 294
P D TF VLSAC+ G F G+ ++R ++ + ++ +V L G++
Sbjct: 295 PLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIV 354
Query: 295 EACDLIMQMRVKPDPGVWGALLN 317
A + M +K D W +L+
Sbjct: 355 IAKRIFDTMNLK-DVVSWNTILS 376
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 141/331 (42%), Gaps = 44/331 (13%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T +V Y ++ A +F+ + + +WN +I Y +G A EL+ R++ +
Sbjct: 236 TTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVP 295
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNK----WETDVFVGAALIDMYAKCSCVVN 126
D FTF L AC+ G+ +H +IR + E + V AL+ +Y+K +V
Sbjct: 296 LDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVI 355
Query: 127 ARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
A+++FD + +D SW ++ Y
Sbjct: 356 AKRIFDTMNLKDV--------------------------VSW-----------NTILSGY 378
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFV 245
G + A +F+ + K +SW M++GY G S AL LF +M+ E V+P T+
Sbjct: 379 IDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYA 438
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
G ++AC G GR +V+ + S ++ + G +++A L+ +
Sbjct: 439 GAIAACGELGALKHGRQLHAHLVQ-CGFEASNSAGNALLTMYAKCGAVNDA-RLVFLVMP 496
Query: 306 KPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
D W A++++ HGH + A ++++
Sbjct: 497 NLDSVSWNAMISALGQHGHGREALELFDQMV 527
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF L+ +Y+ C +++A +F +P + WN +I A +G A+EL+
Sbjct: 464 GFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELF 523
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN---KWETDVFVGAALIDMY 118
+++ G+ PD +F L AC+ ++EG E + R+ D + A LID+
Sbjct: 524 DQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHY--ARLIDLL 581
Query: 119 AKCSCVVNARQVFDKILERDPSEATLVTVISA 150
+ + AR + K + +P+ + ++S
Sbjct: 582 GRSGRIGEARDLI-KTMPFEPTPSIWEAILSG 612
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 195/540 (36%), Positives = 304/540 (56%), Gaps = 35/540 (6%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++ T L+ +Y+ C L A ++F + RN W+ LI + A L+ +L
Sbjct: 240 LIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVE 299
Query: 68 GLVPDNFT-FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
G+ + T AL+ C++L+ + G ++H + ++ D+ G +L+ MYAK +
Sbjct: 300 GMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINE 359
Query: 127 ARQVFDKILERD---------------------------------PSEATLVTVISASAD 153
A +FD+I +D P AT+V++I A +
Sbjct: 360 ATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSH 419
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAM 213
+AAL GR HG L + +L+DMYAKCG + ++R +F+++ + +VSWN M
Sbjct: 420 LAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTM 479
Query: 214 ITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYH 272
I GY +HG +A LF MK++ +PD +TF+ +++ACS GL EG+ +F++M Y
Sbjct: 480 IAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYG 539
Query: 273 IDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELAL 332
I P ++HY CMVDLL G LDEA I M +K D VWGALL +C++H ++ L +
Sbjct: 540 ILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVS 599
Query: 333 EKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAF 392
+ +L P GN+V+LSNI++ A ++ A++R + +G KKS CSWIE+ HAF
Sbjct: 600 RMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAF 659
Query: 393 LSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAF 452
+ GD SHP +IY +L + +K+ GY T V D+E +EK + HSE+LAIAF
Sbjct: 660 VGGDQSHPCSPDIYHELDNILIDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAF 719
Query: 453 GLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
G+++ + + +TKNL++C DCH AIK+++ + R I VRD NR+HHFK+G CSCGD+W
Sbjct: 720 GVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDANRFHHFKNGQCSCGDFW 779
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 174/398 (43%), Gaps = 92/398 (23%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A Q+FDRIP + +N LIRAY+W GP+ AI+LY +L + P+ +TFPF LKACSA
Sbjct: 52 ARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSA 111
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
L+ + GR IH TD+FV ALID+Y +C+ A VF K+ RD
Sbjct: 112 LADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAM 171
Query: 139 ---------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHR 171
P+ +TLV+++ A AL QG +H + R
Sbjct: 172 LAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAY 231
Query: 172 FELN---VKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALD 228
+ N V + TAL+DMYAKC + A +F + + V+W+A+I G+ + T+A +
Sbjct: 232 LDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFN 291
Query: 229 LFEKM-------------------------------------KDEVQPDHITFVGVLSAC 251
LF+ M K + D +LS
Sbjct: 292 LFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMY 351
Query: 252 SRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR---VKPD 308
++ GL +E M F+ + I Y ++ +G+ +EA + +M+ V+PD
Sbjct: 352 AKAGLINEATMLFDEIAIKDTIS-----YGALLSGYVQNGKAEEAFLVFKKMQACNVQPD 406
Query: 309 PGVWGALLNSCK----------LHGHVKLAELALEKLI 336
+L+ +C HG V + LALE I
Sbjct: 407 IATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSI 444
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 165/358 (46%), Gaps = 49/358 (13%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI- 67
++T L+ LY C A +F ++P R++ WN ++ YA +G Y AI LL++
Sbjct: 136 VSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIA---HLLDMQ 192
Query: 68 ---GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIR---NKWETDVFVGAALIDMYAKC 121
GL P+ T L + A+ +G +H +R ++ E V +G AL+DMYAKC
Sbjct: 193 DRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKC 252
Query: 122 SCVVNARQVFDKILERDP----------------------------------SEATLVTV 147
+V A +VF + R+ S ++ +
Sbjct: 253 KHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASA 312
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRV 207
+ A +A L G +LH + ++ +L+ MYAK GL+ A LF+++ K
Sbjct: 313 LRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDT 372
Query: 208 VSWNAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
+S+ A+++GY +G + +A +F+KM+ VQPD T V ++ ACS GR S
Sbjct: 373 ISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGS 432
Query: 267 -MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHG 323
++R ++ S+ ++D+ GR+D + + +M + D W ++ +HG
Sbjct: 433 VIIRGLALETSI--CNSLIDMYAKCGRIDLSRQVFDKMPAR-DIVSWNTMIAGYGIHG 487
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + L+ +Y+ C + + Q+FD++P R++ WN +I Y +G + A L+
Sbjct: 437 GLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLF 496
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
+ G PD+ TF + ACS + EG+
Sbjct: 497 LSMKNQGFEPDDVTFICLIAACSHSGLVTEGK 528
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 5/136 (3%)
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVL 248
G + +AR +F+++ ++NA+I Y+ G A+DL+ M V P+ TF VL
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 249 SACSRGGLFDEGRMFF-ESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKP 307
ACS GR + H D V T ++DL R A ++ +M ++
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVS--TALIDLYIRCARFGPAANVFAKMPMR- 163
Query: 308 DPGVWGALLNSCKLHG 323
D W A+L HG
Sbjct: 164 DVVAWNAMLAGYANHG 179
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/537 (35%), Positives = 308/537 (57%), Gaps = 35/537 (6%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
F ++ ++A V Y+ C L A ++F I + + WN LI +A + ++++ +
Sbjct: 781 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 840
Query: 63 RLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS 122
++ GL+PD+FT L ACS L ++ G+ +H +IRN E D+FV +++ +Y C
Sbjct: 841 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 900
Query: 123 CVVNARQVFDKILERD----------------PSEA-----------------TLVTVIS 149
+ + +FD + ++ P A +++ V
Sbjct: 901 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 960
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A + + +L GRE H ++ +H E + + +L+DMYAK G + + +F L+EK S
Sbjct: 961 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 1020
Query: 210 WNAMITGYAMHGHSTKALDLFEKMKDEV-QPDHITFVGVLSACSRGGLFDEGRMFFESMV 268
WNAMI GY +HG + +A+ LFE+M+ PD +TF+GVL+AC+ GL EG + + M
Sbjct: 1021 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 1080
Query: 269 RDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQ-MRVKPDPGVWGALLNSCKLHGHVKL 327
+ + P+++HY C++D+LG +G+LD+A ++ + M + D G+W +LL+SC++H ++++
Sbjct: 1081 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEM 1140
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
E KL ELEP NYV+LSN+YA WE V K+R+ M + ++K CSWIE+
Sbjct: 1141 GEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNR 1200
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
K +F+ G+ +EI + LE ++ + GY P T SV HD+ +EK + HSE+
Sbjct: 1201 KVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEK 1260
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDG 504
LA+ +GLI T +GT + + KNL+IC DCH A K ISK+ EREI VRD R+HHFK+G
Sbjct: 1261 LALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNG 1317
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 143/285 (50%), Gaps = 41/285 (14%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL T+++ +Y+ C ++ +FD + +NLF WN +I +Y+ N Y+ +E + ++
Sbjct: 476 VLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMIST 535
Query: 68 G-LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
L+PD+FT+P +KAC+ +S + G +H V++ DVFVG AL+ Y V +
Sbjct: 536 TDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTD 595
Query: 127 ARQVFDKILERD-------------------------------------PSEATLVTVIS 149
A Q+FD + ER+ P ATLVTV+
Sbjct: 596 ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLP 655
Query: 150 ASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS 209
A + G+ +HG++ + R + + + AL+DMY+KCG + A+ +F+ K VVS
Sbjct: 656 VCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVS 715
Query: 210 WNAMITGYAMHGHSTKALDLFEKM---KDEVQPDHITFVGVLSAC 251
WN M+ G++ G + D+ +M ++V+ D +T + + C
Sbjct: 716 WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 760
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 177/410 (43%), Gaps = 42/410 (10%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
VL L+ +YS C C+ NA +F +N+ WN ++ ++ G ++ ++L
Sbjct: 683 VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAG 742
Query: 68 G--LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV 125
G + D T A+ C S + + +H ++ ++ + V A + YAKC +
Sbjct: 743 GEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLS 802
Query: 126 NARQVFDKILERD---------------------------------PSEATLVTVISASA 152
A++VF I + P T+ +++SA +
Sbjct: 803 YAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 862
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA 212
+ +L G+E+HGF R+ E ++ V +++ +Y CG + + LF+ + +K +VSWN
Sbjct: 863 KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNT 922
Query: 213 MITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
+ITGY +G +AL +F +M +Q I+ + V ACS GR ++
Sbjct: 923 VITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK-- 980
Query: 272 HIDPSVQHYTC-MVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAEL 330
H+ C ++D+ +G + ++ + ++ K W A++ +HG K A
Sbjct: 981 HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEK-STASWNAMIMGYGIHGLAKEAIK 1039
Query: 331 ALEKLIEL--EPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
E++ P D +L+ EG+ L ++ G+K ++
Sbjct: 1040 LFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNL 1089
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 144 LVTVISASADIAALPQGRELHGF-SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
L ++ AS + GR++H S R + + T ++ MYA CG +R +F+ L
Sbjct: 442 LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL 501
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEG 260
R K + WNA+I+ Y+ + + L+ F +M ++ PDH T+ V+ AC+ G+ D G
Sbjct: 502 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACA--GMSDVG 559
>gi|224127907|ref|XP_002320193.1| predicted protein [Populus trichocarpa]
gi|222860966|gb|EEE98508.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 186/500 (37%), Positives = 292/500 (58%), Gaps = 5/500 (1%)
Query: 16 LYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFT 75
+Y DCL ++ +FD + +N+ WN LI Y++ G ++ A L R+ E G+ PD T
Sbjct: 1 MYVKNDCLTSSQAIFDNMKNKNIVAWNSLISGYSFKGHFDHAKRLLNRMKEEGIKPDLIT 60
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKIL 135
+ + S +E + D+ + +V ALI ++ + + F ++
Sbjct: 61 WNSLVAGYSMRGHTKEALALIHDIKISGLTPNVVSWTALISGCSQNGNYSESIEAFVQMQ 120
Query: 136 ER--DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVK 193
E P+ AT+ +++ ++ L +G+E+H S R F ++ V TAL+D Y+K G ++
Sbjct: 121 EEGIKPNSATISSLLRTCGGLSLLQKGKEIHCLSIRKSFIEDLYVATALIDTYSKSGDLE 180
Query: 194 VARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACS 252
A +F EK + SWN MI G+A++G + + L + M+ + PD ITF +LS C
Sbjct: 181 SAHKVFWS-AEKTLASWNCMIMGFAINGCGREVIALLDGMQRAGILPDAITFTALLSGCK 239
Query: 253 RGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVW 312
GL +EG F+ M DY I P+++HY+CM DLLG +G LDEA D I M +KPD VW
Sbjct: 240 NSGLVEEGWKCFDMMSNDYGIKPTIEHYSCMADLLGRAGYLDEAWDFIQTMPIKPDASVW 299
Query: 313 GALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDR 372
GA+L SC++HG+++ AE+A ++L +LEP+++ NYV++ ++YA + WE V +++ LM R
Sbjct: 300 GAMLGSCRIHGNIEFAEIAAKELFKLEPYNSANYVLMLSLYAMSNRWEDVDRIKDLMDTR 359
Query: 373 GIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDV 432
GIK SWI++ + H F +G H + EIY +L L +K+ GY+P V+ ++
Sbjct: 360 GIKPRQVWSWIQIDQRVHLFSAGGIPHQDEGEIYYELYQLVSELKKFGYLPDVNCVYQNI 419
Query: 433 ENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITV 492
+ +EK M+ H+E+LAI +GLI T + + KN +IC DCH A K IS + REI +
Sbjct: 420 DEEEKVKMLLSHTEKLAITYGLIKTSSAP-IRVIKNTRICSDCHTAAKLISLVRSREIFL 478
Query: 493 RDVNRYHHFKDGICSCGDYW 512
RD R+HHFK G CSC DYW
Sbjct: 479 RDGVRFHHFKAGKCSCNDYW 498
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 209/549 (38%), Positives = 308/549 (56%), Gaps = 39/549 (7%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEV-AIEL 60
G ++ L+ LY+ DC+ ++F +P+ + WN I A A + + AI+
Sbjct: 486 GLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKY 545
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ +++ G P+ TF L A S+LS +E GR+IH ++++ D + L+ Y K
Sbjct: 546 FLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGK 605
Query: 121 CSCVVNARQVFDKILERDPS----------------------------------EATLVT 146
C + + +F ++ ER + TL T
Sbjct: 606 CEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLAT 665
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V+SA A +A L +G E+H + R E V V +ALVDMYAKCG + A FE + +
Sbjct: 666 VLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRN 725
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDEVQ-PDHITFVGVLSACSRGGLFDEGRMFFE 265
+ SWN+MI+GYA HGH KAL LF +MK Q PDH+TFVGVLSACS GL DEG F+
Sbjct: 726 IYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFK 785
Query: 266 SMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSC--KLHG 323
SM Y + P ++H++CMVDLLG +G + + + I M + P+ +W +L +C
Sbjct: 786 SMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSR 845
Query: 324 HVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWI 383
+ +L A + LIELEP +A NYV+LSN++A WE V + R M + +KK CSW+
Sbjct: 846 NTELGRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWV 905
Query: 384 EVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICC 443
+K+ H F++GD +HP ++IY KLK + +M++ GYVP T+ +D+E + K ++
Sbjct: 906 TMKDGVHVFVAGDQTHPEKEKIYDKLKEIMNKMRDLGYVPETKYALYDLELENKEELLSY 965
Query: 444 HSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKD 503
HSE+LAIAF L + + I KNL++C DCH A K+IS I R+I +RD NR+HHF
Sbjct: 966 HSEKLAIAFVLTRQSE-LPIRIIKNLRVCGDCHTAFKYISNIVNRQIILRDSNRFHHFDG 1024
Query: 504 GICSCGDYW 512
GICSC DYW
Sbjct: 1025 GICSCQDYW 1033
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 164/353 (46%), Gaps = 38/353 (10%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++ LV+LY+ C+ + NA +F +P ++ WN +I N +E A+ ++ +
Sbjct: 391 LIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRN 450
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+VP F+ L +C++L I G++IH + I+ + DV V AL+ +YA+ C+
Sbjct: 451 GMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEY 510
Query: 128 RQVFDKILERD----------------------------------PSEATLVTVISASAD 153
++VF + E D P+ T + ++SA +
Sbjct: 511 QKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSS 570
Query: 154 IAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR-VVSWNA 212
++ L GR++H +H + ++ L+ Y KC ++ +F ++ E+R VSWNA
Sbjct: 571 LSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNA 630
Query: 213 MITGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMVRDY 271
MI+GY +G KA+ L M + Q D T VLSAC+ + G +R
Sbjct: 631 MISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRAC 690
Query: 272 HIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
++ V + +VD+ G++D A M V+ + W ++++ HGH
Sbjct: 691 -LEAEVVVGSALVDMYAKCGKIDYASRFFELMPVR-NIYSWNSMISGYARHGH 741
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 170/351 (48%), Gaps = 47/351 (13%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
LV+++ L +A +LFD +PQ+NL W+ L+ YA NG + A L+ ++ GL+P+
Sbjct: 80 LVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPN 139
Query: 73 NFTFPFALKACSAL--SAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVV-NARQ 129
++ AL+AC L + ++ G IH + ++ + +D+ + L+ MY+ CS + +AR+
Sbjct: 140 HYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARR 199
Query: 130 VFDKI------------------------------LERD-------PSEATLVTVISASA 152
VF++I ++R+ P+E T ++++ +
Sbjct: 200 VFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVAC 259
Query: 153 DIA--ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
+ L ++ + F ++ V +ALV +A+ GL+ A+ +FEQ+ ++ V+
Sbjct: 260 SLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTM 319
Query: 211 NAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFES---- 266
N ++ G A +A +F++MKD V+ + ++ +LSA + EG+ +
Sbjct: 320 NGLMVGLARQHQGEEAAKIFKEMKDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAY 379
Query: 267 MVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLN 317
++R+ +D + +V+L +D A I Q+ D W ++++
Sbjct: 380 LIRNALVDVWILIGNALVNLYAKCNAIDNARS-IFQLMPSKDTVSWNSIIS 429
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 141/296 (47%), Gaps = 51/296 (17%)
Query: 8 VLATKLVHLYSACDC-LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRL-- 64
VL+ L+ +YS C + +A ++F+ I + WN +I Y G A +L+ +
Sbjct: 178 VLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQR 237
Query: 65 --LEIGLVPDNFTF-PFALKACS----ALSAIEEGRRIHEDVIRNKWETDVFVGAALIDM 117
E+ P+ +TF ACS L+ +E+ + + ++ + D++VG+AL+
Sbjct: 238 EATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQ---MLARIEKSSFVKDLYVGSALVSG 294
Query: 118 YAKCSCVVNARQVFDKILERDP--------------------------------SEATLV 145
+A+ + +A+ +F+++ +R+ + ++
Sbjct: 295 FARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINASSYA 354
Query: 146 TVISASADIAALPQGR----ELHGFSWRHRF-ELNVKVKTALVDMYAKCGLVKVARNLFE 200
++SA + + L +G+ E+H + R+ ++ + + ALV++YAKC + AR++F+
Sbjct: 355 VLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQ 414
Query: 201 QLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGG 255
+ K VSWN++I+G + +A+ F M ++ + P + + LS+C+ G
Sbjct: 415 LMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLG 470
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 160/362 (44%), Gaps = 53/362 (14%)
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
P N + +C+ +E+ ++H + + +DVF L++++ + +V+A+++
Sbjct: 41 PLNLDYNRYRDSCT----VEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKL 96
Query: 131 FDKILERD----------------PSEATLV--TVISA----------SADIAA------ 156
FD++ +++ P EA ++ +ISA SA A
Sbjct: 97 FDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPN 156
Query: 157 -LPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGL-VKVARNLFEQLREKRVVSWNAMI 214
L G E+HG + + ++ + L+ MY+ C + AR +FE+++ K SWN++I
Sbjct: 157 MLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSII 216
Query: 215 TGYAMHGHSTKALDLFEKMKDEV-----QPDHITFVGVLS-ACSRGGLFDEGRMFFESMV 268
+ Y G + A LF M+ E +P+ TF +++ ACS L D G E M+
Sbjct: 217 SVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACS---LVDCGLTLLEQML 273
Query: 269 RDYHIDPSVQHY---TCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
V+ + +V G +D A + QM + + G ++ + H
Sbjct: 274 ARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGE 333
Query: 326 KLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEV 385
+ A++ +++ +L +A +Y +L + + +N + + + + I+ ++ WI +
Sbjct: 334 EAAKI-FKEMKDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILI 392
Query: 386 KN 387
N
Sbjct: 393 GN 394
>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
Length = 605
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 207/513 (40%), Positives = 291/513 (56%), Gaps = 29/513 (5%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYR-------LL 65
+V S + A +F +P RN WN ++ A A +G A L+ +L
Sbjct: 109 MVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVAARASSGDMGAAENLFRNAPEKTDAIL 168
Query: 66 EIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRN--KWETDVFVGAALIDMYAKCSC 123
+V KA A+ +RN W A++ Y K S
Sbjct: 169 WTAMVSGYMDTGNVQKAMEYFRAMP---------VRNLVSWN-------AVVAGYVKNSR 212
Query: 124 VVNARQVFDKILER---DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
+A +VF ++E P+ +TL +V+ ++++AL GR++H + + ++ V T
Sbjct: 213 AGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGT 272
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQP 239
+L+ MY KCG + A LF+++ K +V+WNAMI+GYA HG KA+ LFEKMKDE V P
Sbjct: 273 SLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVP 332
Query: 240 DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
D IT + VL+AC GL D G FE+M Y+I+P V HY+CMVDLL +G L+ A ++
Sbjct: 333 DWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNM 392
Query: 300 IMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANW 359
I M +P P +G LL +C+++ +++ AE A KLIE +P +AG YV L+NIYA A W
Sbjct: 393 IHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYVQLANIYAVANRW 452
Query: 360 EGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEA 419
+ V+++R+ M D + K+ SW+E+K H F S D HP D I+ KL L MK
Sbjct: 453 DDVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLDLIHDKLDRLGKLMKAM 512
Query: 420 GYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAI 479
GY P + HDVE K+ M+ HSE+LAIAFGLI+T G L I KNL+IC DCH A
Sbjct: 513 GYSPDLDFALHDVEESLKSQMLMRHSEKLAIAFGLISTSPGMTLRIFKNLRICGDCHNAA 572
Query: 480 KFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
K ISKI +REI +RD R+HHF+ G CSCGDYW
Sbjct: 573 KLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 605
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYY 62
G + T L+ +Y C L +A +LFD + +++ WN +I YA +G AI+L+
Sbjct: 264 LGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFE 323
Query: 63 RLLEIGLVPDNFTFPFALKAC 83
++ + G+VPD T L AC
Sbjct: 324 KMKDEGVVPDWITLLAVLTAC 344
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 30/219 (13%)
Query: 114 LIDMYAKCSC---VVNARQVFDKILERDP-SEATLVTVISASADIAALPQGRELHGFSWR 169
L+ YAK S + +AR++FD I D S TL++ A DI +WR
Sbjct: 44 LLAGYAKASGPGRLADARRLFDSIPHPDAVSYNTLLSCHFACGDIDG----------AWR 93
Query: 170 HRFELNVKVKTA---LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ V+ T+ +V +K G ++ A +F + + VSWNAM+ A G A
Sbjct: 94 VFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVAARASSGDMGAA 153
Query: 227 LDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM-VRDYHIDPSVQHYTCMVD 285
+LF ++ D I + ++S G + +F +M VR+ + + +V
Sbjct: 154 ENLFRNAPEKT--DAILWTAMVSGYMDTGNVQKAMEYFRAMPVRN------LVSWNAVVA 205
Query: 286 LLGHSGRLDEACDLIMQMR----VKPDPGVWGALLNSCK 320
+ R +A + M V+P+P ++L C
Sbjct: 206 GYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCS 244
>gi|297834310|ref|XP_002885037.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330877|gb|EFH61296.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 196/544 (36%), Positives = 304/544 (55%), Gaps = 51/544 (9%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLF---LWNVLIRAYAWNGPYEVAIELYYR 63
P L +KL+ L+S C L A ++FD + +L +W + Y+ NG A+ +Y
Sbjct: 160 PKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVD 219
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
+L + P NF+ ALKAC L + GR IH +++ K + D V L+ +Y +
Sbjct: 220 MLCSFIEPGNFSISVALKACVDLKDLRVGRGIHGQIVKRKEKVDQVVYNVLLKLYMERGS 279
Query: 124 VVNARQVFDKILERDP---------------------------------SEATLVTVISA 150
+AR+VFD + ER+ S ATL T++ A
Sbjct: 280 FDDARKVFDGMSERNIVTWNSLISILSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPA 339
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
+ +AAL G+E+H + + + +V + +L+DMY KCG V+ +R +F+ + K + +W
Sbjct: 340 CSRVAALITGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGDVEYSRRVFDGMLTKDLTTW 399
Query: 211 NAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
N ++ YA++G+ + ++LFE M + V PD ITFV +LS CS GL + G FE M
Sbjct: 400 NTILNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGISLFERMKT 459
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
++ + P+++HY C+VD+LG +G+++EA +I M KP +WG+LLNSC+LHG+V + E
Sbjct: 460 EFRVSPALEHYACLVDILGRAGKIEEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGE 519
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
+ G + L A A W+ V K+R++M RGIKK CSW++VK+K
Sbjct: 520 I-------------GTMLWLRTYIAEAKMWDNVDKIREMMKQRGIKKEAGCSWVQVKDKI 566
Query: 390 HAFLSGDA-SHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERL 448
F++G N DE L+ ++++GY P T V HDV+ + KAN +C HSERL
Sbjct: 567 QIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPDTSVVLHDVDEETKANWVCGHSERL 626
Query: 449 AIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSC 508
A + LI+T +G + +TKNL++C DCH +K +S++T R I +RD R+HHF GICSC
Sbjct: 627 AATYSLIHTGEGVPVRVTKNLRVCADCHSWMKIVSQVTGRVIVLRDTKRFHHFVAGICSC 686
Query: 509 GDYW 512
DYW
Sbjct: 687 KDYW 690
>gi|302782375|ref|XP_002972961.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
gi|300159562|gb|EFJ26182.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
Length = 601
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 195/545 (35%), Positives = 299/545 (54%), Gaps = 38/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG V+ L+H+Y+ C A +FD++ +NL + +I+AY + A ELY
Sbjct: 61 GFGTDLVVQNSLIHMYAKCGSFKFAAGVFDKMEPKNLISYTSMIQAYTHTAKHVEAYELY 120
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++L G++PD + + AL C I EG IH + ++ T V AL+ MY +
Sbjct: 121 KKMLSEGIMPDIYAYAAALAVC---PTIREGEAIHVKLGNHERRTPV-CSNALVGMYGRF 176
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +A+ VFD I +D P+ T +V+
Sbjct: 177 GRIASAKWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTYTSVL 236
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A + + AL +G+E+H +V TALV+MYAKCG AR +F K V
Sbjct: 237 DACSKLGALTEGKEIHKKVKGGDQPTDVAYNTALVNMYAKCGSAHEARAVFNDCGLKNVF 296
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W ++++ Y+ G S L+ +++M E V PD +TF + +ACS GL DEG ++F +M
Sbjct: 297 TWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAM 356
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
D+ I P HYTCM+DLLG GRL EA +L+ M PD W LL++CK++G +K+
Sbjct: 357 REDHWIVPLQPHYTCMIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKI 416
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
A +++ EL P D+G Y+++ N+YA+A W VA+++K++ RG+ K S IE +
Sbjct: 417 GARAYKRITELNPPDSGPYLLMGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKSMIEAQR 476
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ H F+ GD +HP EI A+L+ + ++ AGY P T+ V DV + K ++ HSER
Sbjct: 477 RIHEFVCGDTAHPLNQEIRARLQEVHEQLSHAGYEPDTKEVLVDVNEEVKPELLLFHSER 536
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
+A+ GL+ + G L I KNL+IC DCH K +SK+ R++ VRD +R+H F+ G CS
Sbjct: 537 MALGLGLLTSDAGATLHIVKNLRICPDCHSFFKLVSKMLHRKVLVRDSHRFHIFQRGSCS 596
Query: 508 CGDYW 512
CGDYW
Sbjct: 597 CGDYW 601
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 35/283 (12%)
Query: 47 AYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALS--AIEEGRRIHEDVIRNKW 104
AY N ++ A++L+ + + L + T+ LK+C+ L +E+G+ IH I +
Sbjct: 3 AYQENDLHKKALQLFKKSINEELQQNQATYVTVLKSCAHLGDDYLEDGKEIHRHAIAQGF 62
Query: 105 ETDVFVGAALIDMYAKCSCVVNARQVFDKILERD-------------------------- 138
TD+ V +LI MYAKC A VFDK+ ++
Sbjct: 63 GTDLVVQNSLIHMYAKCGSFKFAAGVFDKMEPKNLISYTSMIQAYTHTAKHVEAYELYKK 122
Query: 139 -PSEATLVTVISASADIAALP---QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKV 194
SE + + + +A +A P +G +H H V ALV MY + G +
Sbjct: 123 MLSEGIMPDIYAYAAALAVCPTIREGEAIHVKLGNHERRTPV-CSNALVGMYGRFGRIAS 181
Query: 195 ARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSR 253
A+ +F+ +R K + S+N MI +A + +KA+ L+ +M+ ++P+ T+ VL ACS+
Sbjct: 182 AKWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTYTSVLDACSK 241
Query: 254 GGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEA 296
G EG+ + V+ V + T +V++ G EA
Sbjct: 242 LGALTEGKEIHKK-VKGGDQPTDVAYNTALVNMYAKCGSAHEA 283
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 191/485 (39%), Positives = 279/485 (57%), Gaps = 34/485 (7%)
Query: 20 CDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFA 79
C + +A LF + R+ W ++ NG A++++ R+ G+ D +TF
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSI 284
Query: 80 LKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD- 138
L AC AL+A+EEG++IH + R +E +VFVG+AL+DMY+KC + A VF ++ R+
Sbjct: 285 LTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344
Query: 139 --------------------------------PSEATLVTVISASADIAALPQGRELHGF 166
P + TL +VIS+ A++A+L +G + H
Sbjct: 345 ISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCL 404
Query: 167 SWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKA 226
+ + V ALV +Y KCG ++ A LF+++ VSW A++TGYA G + +
Sbjct: 405 ALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKET 464
Query: 227 LDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVD 285
+DLFEKM + ++PD +TF+GVLSACSR GL ++G +F+SM +D+ I P HYTCM+D
Sbjct: 465 IDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMID 524
Query: 286 LLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGN 345
L SGR EA + I QM PD W LL+SC+L G++++ + A E L+E +P + +
Sbjct: 525 LYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPAS 584
Query: 346 YVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEI 405
YV+L +++A W VA LR+ M DR +KK CSWI+ KNK H F + D SHP I
Sbjct: 585 YVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRI 644
Query: 406 YAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLI 465
Y KL+WL +M E GY P SV HDV + +K +MI HSE+LAIAFGLI P + I
Sbjct: 645 YEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRI 704
Query: 466 TKNLK 470
KNL+
Sbjct: 705 VKNLR 709
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 164/366 (44%), Gaps = 54/366 (14%)
Query: 25 NAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLL-EIGLVPDNFTFPFALKAC 83
+ +LF +P+R+ +N LI ++ G +++LY LL E + P T +
Sbjct: 97 DMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVA 156
Query: 84 SALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEAT 143
SALS G +H V+R + FVG+ L+DMYAK + +AR+VF ++ EA
Sbjct: 157 SALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEM------EAK 210
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
V + + L+ +C +++ A+ LF+ +
Sbjct: 211 TVVMYN-------------------------------TLITGLLRCKMIEDAKGLFQLMV 239
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRM 262
++ ++W M+TG +G +ALD+F +M+ E V D TF +L+AC +EG+
Sbjct: 240 DRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQ 299
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLG--HSGRLDEACDLIMQMRVKPDPGVWGALL---- 316
+ R ++ D +V + +VD+ S RL EA M R + W A++
Sbjct: 300 IHAYITRTWYED-NVFVGSALVDMYSKCRSIRLAEAVFRRMTCR---NIISWTAMIVGYG 355
Query: 317 -NSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIK 375
N+C +E+ ++ ++P D ++S+ A A+ E A+ L + G+
Sbjct: 356 QNACSEEAVRAFSEMQMDG---IKPDDFTLGSVISSC-ANLASLEEGAQFHCLALVSGLM 411
Query: 376 KSIACS 381
+ I S
Sbjct: 412 RYITVS 417
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + ++ LV LY C + +AH+LFD + + W L+ YA G + I+L+
Sbjct: 409 GLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLF 468
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEG 92
++L GL PD TF L ACS +E+G
Sbjct: 469 EKMLANGLKPDGVTFIGVLSACSRAGLVEKG 499
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 205/556 (36%), Positives = 302/556 (54%), Gaps = 66/556 (11%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L +A L P RN+ W LI Y+ G A++ + +L G+ PD T L A
Sbjct: 187 LDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSA 246
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS-------------------- 122
C+ L + GR +H+ V + ALIDMYAKC
Sbjct: 247 CAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQS 306
Query: 123 --------CVVN----ARQVFDKILERD-------------------------------- 138
C + AR +FD++ +RD
Sbjct: 307 WNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDL 366
Query: 139 -PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
T+V++++A A + ALPQGR LH + E+++ + TAL+DMY KCG V+ A
Sbjct: 367 RADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASL 426
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGL 256
+F+ + + V +W+AMI G A +G AL+ F MK D QP+ +T++ +L+ACS L
Sbjct: 427 VFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCL 486
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
DEGR++FE M ++I P ++HY CM+DLLG SG LDEA DL+ M ++P+ +W ++L
Sbjct: 487 LDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASIL 546
Query: 317 NSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKK 376
++C++H LA A E L++LEP + YV L NIY + WE +++R+LM +RG+KK
Sbjct: 547 SACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKK 606
Query: 377 SIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDE 436
+ S I V + H F+ D +HP EI A ++ + R+K GY P T + DV+ +E
Sbjct: 607 AAGYSSITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLKSVGYSPITSQITVDVDEEE 666
Query: 437 KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVN 496
K + + HSE++AIAFGLI+ L I KNL++C+DCH AIK IS+I REI VRD +
Sbjct: 667 KEHALLAHSEKIAIAFGLISLAPNLPLHIIKNLRVCEDCHSAIKLISRIWNREIIVRDRS 726
Query: 497 RYHHFKDGICSCGDYW 512
R+HHF+DG CSC D+W
Sbjct: 727 RFHHFRDGTCSCNDFW 742
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 155/354 (43%), Gaps = 70/354 (19%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRI-------------------------------PQ 35
P+++ ++H+Y +A + FD I P
Sbjct: 140 PLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPA 199
Query: 36 RNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRI 95
RN+ W LI Y+ G A++ + +L G+ PD T L AC+ L + GR +
Sbjct: 200 RNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSL 259
Query: 96 HEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIA 155
H+ V + ALIDMYAKC + A +VFD
Sbjct: 260 HKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFD----------------------- 296
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL +GR SW A++D Y K G V VAR LF+Q+ ++ +V++N++IT
Sbjct: 297 ALGRGRRPQ--SW-----------NAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLIT 343
Query: 216 GYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GY G +AL LF +M + +++ D+ T V +L+AC+ G +GR + + ++
Sbjct: 344 GYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRA-LHACIEQRLVE 402
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
+ T ++D+ GR++EA + M V+ D W A++ +G K A
Sbjct: 403 VDIYLGTALLDMYLKCGRVEEASLVFQAMSVR-DVHTWSAMIAGLAFNGMGKAA 455
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 150/335 (44%), Gaps = 49/335 (14%)
Query: 9 LATKLVHLYSACDCLHNAHQL--FDRIPQRNLFLWNVLIRA--YAWNGPYEVAIELYYRL 64
L LV+ ++ D LH + L FDR+P + FL++ +RA A +GP E + LY R+
Sbjct: 37 LLNSLVNCFTPTDPLHLRYALCLFDRMPC-STFLFDTALRACFRASSGP-ESPLILYRRM 94
Query: 65 LEIGLVPDNFTFPFALKACSALSA-IEEGRRIHEDVIRNKWETDV-FVGAALIDMYAKCS 122
G+ D FTF F K C+ A + + +H R + V V +I MY +
Sbjct: 95 RRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELG 154
Query: 123 CVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTAL 182
+AR+ FD I +D +W T +
Sbjct: 155 LAGDARRAFDDIPVKD--------------------------AVAW-----------TTV 177
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDH 241
+ AK GL+ A L + V+SW +I+GY+ G + +A+D F M D ++PD
Sbjct: 178 ISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDE 237
Query: 242 ITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM 301
+T +G+LSAC++ GR + +V + + S + ++D+ G + A ++
Sbjct: 238 VTVIGLLSACAQLKDLVFGRSLHK-LVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFD 296
Query: 302 QMRVKPDPGVWGALLNS-CKLHGHVKLAELALEKL 335
+ P W A+++ CKL GHV +A +++
Sbjct: 297 ALGRGRRPQSWNAMIDGYCKL-GHVDVARYLFDQM 330
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 119/262 (45%), Gaps = 21/262 (8%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G G P ++ Y + A LFD++ R+L +N LI Y G A+ L
Sbjct: 298 LGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLL 357
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ L DNFT L AC++L A+ +GR +H + + E D+++G AL+DMY K
Sbjct: 358 FMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLK 417
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALP---QGR-ELHGFSWRH--RFEL 174
C V A VF + RD V + SA IA L G+ L F W F+
Sbjct: 418 CGRVEEASLVFQAMSVRD--------VHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQP 469
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLR-----EKRVVSWNAMITGYAMHGHSTKALDL 229
N A++ + L+ R FE++R + + MI G +A+DL
Sbjct: 470 NSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDL 529
Query: 230 FEKMKDEVQPDHITFVGVLSAC 251
M +QP+ + + +LSAC
Sbjct: 530 VRTMP--MQPNAVIWASILSAC 549
>gi|357119334|ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Brachypodium distachyon]
Length = 635
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 204/504 (40%), Positives = 285/504 (56%), Gaps = 43/504 (8%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQ-RNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVP 71
L H Y C + +FD +P+ R++ WN ++ Y G A E++
Sbjct: 171 LTHFYGVCGDVGAMRTVFDELPRVRDVVTWNAVLAGYVRAGMVRAAREVF---------- 220
Query: 72 DNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVF 131
E + ++V W T L+ Y K + A VF
Sbjct: 221 -------------------EEMPVRDEV---SWST-------LVGGYVKEGELDVALGVF 251
Query: 132 DKILERDP--SEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC 189
++E+ +EA +VT +SA+A + L GR +H R ++V V ALVDM++KC
Sbjct: 252 RDMVEKGVRVNEAAVVTALSAAAQMGLLEHGRFVHEVVQRTGMPVSVNVGAALVDMFSKC 311
Query: 190 GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVL 248
G V VAR +F+ + + V +WNAMI G A HG A++LF + DE + P ITFVGVL
Sbjct: 312 GCVAVAREVFDGMPRRDVFAWNAMICGLASHGLGQDAVELFWRFLDEGLWPTDITFVGVL 371
Query: 249 SACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPD 308
+ACSR GL EGR +F+ MV Y I+P ++HY CMVDLLG +G + EA +LI M + PD
Sbjct: 372 NACSRCGLVAEGRRYFKLMVDKYRIEPEMEHYGCMVDLLGRAGLVSEAIELIEGMHIAPD 431
Query: 309 PGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKL 368
P +WG +L++CK H V L KLIELEP G+YV+L++IYA+A W+ V ++RKL
Sbjct: 432 PVLWGTVLSACKTHNLVDLGITVGNKLIELEPAHDGHYVLLASIYAKAKKWDEVREVRKL 491
Query: 369 MIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESV 428
M RG KS S +E + H FL GD H + +IY L + R+ +AGYVP SV
Sbjct: 492 MSSRGTGKSAGWSLMEAQGNLHKFLVGDMDHKDSVQIYNMLDMINRRLADAGYVPDVSSV 551
Query: 429 FHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITER 488
HD+ ++EK + I HSERLAIA+G I T G+ + I KNL++C DCH K ++K+ R
Sbjct: 552 LHDIGDEEKVHAIKVHSERLAIAYGFIVTEVGSPIRIVKNLQVCGDCHEFSKMVTKVFNR 611
Query: 489 EITVRDVNRYHHFKDGICSCGDYW 512
EI VRD +R+HH K+G CSC DYW
Sbjct: 612 EIIVRDGSRFHHMKEGKCSCLDYW 635
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 197/522 (37%), Positives = 294/522 (56%), Gaps = 43/522 (8%)
Query: 26 AHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSA 85
A +FD + +RN+ W +I Y N +VA +L+ + E ++ L +
Sbjct: 191 ARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPE----KTEVSWTSMLLGYTL 246
Query: 86 LSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD------- 138
IE+ E V+ K V A+I + + + AR+VFD + +RD
Sbjct: 247 SGRIEDAEEFFE-VMPMK---PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGM 302
Query: 139 --------------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRF 172
PS +L++++S A +A+L GR++H R +F
Sbjct: 303 IKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQF 362
Query: 173 ELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK 232
+ +V V + L+ MY KCG + A+ +F++ K ++ WN++I+GYA HG +AL +F +
Sbjct: 363 DDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHE 422
Query: 233 MKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSG 291
M P+ +T + +L+ACS G +EG FESM + + P+V+HY+C VD+LG +G
Sbjct: 423 MPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAG 482
Query: 292 RLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSN 351
++D+A +LI M +KPD VWGALL +CK H + LAE+A +KL E EP +AG YV+LS+
Sbjct: 483 QVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSS 542
Query: 352 IYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGD-ASHPNCDEIYAKLK 410
I A + W VA +RK M + K CSWIEV K H F G +HP I L+
Sbjct: 543 INASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLE 602
Query: 411 WLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLK 470
+G ++EAGY P V HDV+ +EK + + HSERLA+A+GL+ P+G + + KNL+
Sbjct: 603 KTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLR 662
Query: 471 ICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
+C DCH AIK ISK+TEREI +RD NR+HHF +G CSC DYW
Sbjct: 663 VCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 141/333 (42%), Gaps = 28/333 (8%)
Query: 11 TKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLV 70
T +V Y + A LF R+P+RN W V+ +G + A +LY ++ V
Sbjct: 114 TAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLY----DMMPV 169
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
D + ++E R I +++ E +V +I Y + + V AR++
Sbjct: 170 KDVVASTNMIGGLCREGRVDEARLIFDEM----RERNVVTWTTMITGYRQNNRVDVARKL 225
Query: 131 FDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL----NVKVKTALVDMY 186
F+ + E+ +E + +++ + E FE+ V A++ +
Sbjct: 226 FEVMPEK--TEVSWTSMLLGYTLSGRIEDAEEF--------FEVMPMKPVIACNAMIVGF 275
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFV 245
+ G + AR +F+ + ++ +W MI Y G +ALDLF +M+ + V+P + +
Sbjct: 276 GEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLI 335
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
+LS C+ GR +VR D V + ++ + G L +A L+
Sbjct: 336 SILSVCATLASLQYGRQVHAHLVR-CQFDDDVYVASVLMTMYVKCGELVKA-KLVFDRFS 393
Query: 306 KPDPGVWGALLNSCKLHGHVKLAELALEKLIEL 338
D +W ++++ HG L E AL+ E+
Sbjct: 394 SKDIIMWNSIISGYASHG---LGEEALKIFHEM 423
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 110/245 (44%), Gaps = 17/245 (6%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
++ A + FD + + + WN ++ Y NG + A +L+ + E +V N +K
Sbjct: 33 INEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKN 92
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEA 142
I E R + E + E +V A++ Y + V A +F ++ ER+ E
Sbjct: 93 ----RMIVEARNVFELMP----ERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERN--EV 142
Query: 143 TLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQL 202
+ + D + + R+L+ +V T ++ + G V AR +F+++
Sbjct: 143 SWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVDEARLIFDEM 198
Query: 203 REKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRM 262
RE+ VV+W MITGY + A LFE M ++ + +++ +L + G ++
Sbjct: 199 RERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTE---VSWTSMLLGYTLSGRIEDAEE 255
Query: 263 FFESM 267
FFE M
Sbjct: 256 FFEVM 260
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 20/244 (8%)
Query: 99 VIRNKWETDVFVGAAL-IDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAAL 157
++R + T V + I ++ + AR+ FD + + + + +++S
Sbjct: 7 ILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSL--QFKAIGSWNSIVSGYFSNGLP 64
Query: 158 PQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGY 217
+ R+L + E NV LV Y K ++ ARN+FE + E+ VVSW AM+ GY
Sbjct: 65 KEARQL----FDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGY 120
Query: 218 AMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
G +A LF +M + + +++ + GGL D+GR+ + D V
Sbjct: 121 MQEGMVGEAESLFWRMPER---NEVSWTVMF-----GGLIDDGRIDKARKLYDMMPVKDV 172
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
T M+ L GR+DEA + +MR + + W ++ + + V +A KL E
Sbjct: 173 VASTNMIGGLCREGRVDEARLIFDEMRER-NVVTWTTMITGYRQNNRVDVA----RKLFE 227
Query: 338 LEPH 341
+ P
Sbjct: 228 VMPE 231
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+A+ L+ +Y C L A +FDR +++ +WN +I YA +G E A+++++ + G
Sbjct: 368 VASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSG 427
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDV 99
+P+ T L ACS +EEG I E +
Sbjct: 428 TMPNKVTLIAILTACSYAGKLEEGLEIFESM 458
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 193/519 (37%), Positives = 302/519 (58%), Gaps = 16/519 (3%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQR-----NLFLWNVLIRAYAWNGPYEV 56
G + LV +Y + L +A ++FD P+R + LWNVLI+ G +
Sbjct: 209 GIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKK 268
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALID 116
A++L+ + + +N ++ + + ++ + + + E +V ++D
Sbjct: 269 AVKLFKAMPK----KENVSWSTLIDGFAKNGDMDRAMELFDQMP----EKNVVSWTTMVD 320
Query: 117 MYAKCSCVVNARQVFDKILERD--PSEATLVTVISASADIAALPQGRELHGFSWRHRFEL 174
+++ A +F K+LE P+ T+V+ +SA A I L G +H + + L
Sbjct: 321 GFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHL 380
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK 234
+ TALVDMYAKCG ++ A +F + +K + +W MI G+A+HGHS +A+ F++M
Sbjct: 381 TEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMM 440
Query: 235 -DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
++PD + F+ +L+AC G D G FF+SM DY I+PS++HYT +VD+LG SG+L
Sbjct: 441 FAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQL 500
Query: 294 DEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIY 353
EA I +M + PD +WGAL +C+ H K+A+ AL KL++LEP GNY+ LSN Y
Sbjct: 501 KEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGNYIFLSNAY 560
Query: 354 ARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLE 413
A WE ++R LM +RG+ K+ S IEV+ + H F+SGD H + I KL+ +
Sbjct: 561 AALGQWEDAERVRVLMQNRGVHKNSGWSCIEVEGQVHRFVSGDHDHKDSKAICLKLEEIM 620
Query: 414 GRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKICD 473
+ GY+PGTE V H++E +EK +++ H E+LA+AF LI T G + I KNL++C
Sbjct: 621 AGAVKQGYIPGTEWVLHNMEQEEKEDVLGSHGEKLALAFALICTSPGMTIRIVKNLQVCG 680
Query: 474 DCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
DCH +K+ SKI++REI +RD+ R+HHFKDG CSC D+W
Sbjct: 681 DCHSLMKYASKISQREIMLRDMKRFHHFKDGSCSCRDHW 719
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 171/332 (51%), Gaps = 8/332 (2%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++ T+L+ S ++++ +F+ +NLF +N LIR N + AI + +L
Sbjct: 114 LITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRS 173
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
G+ PD T+PF LK+ + L + E G IH ++R E D FV +L+DMY K + +A
Sbjct: 174 GIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSA 233
Query: 128 RQVFDKILER-DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMY 186
+VFD+ ER D + L+ + A + + F + E NV T L+D +
Sbjct: 234 FKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPKKE-NVSWST-LIDGF 291
Query: 187 AKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFV 245
AK G + A LF+Q+ EK VVSW M+ G++ +G S KAL +F KM +E V+P+ T V
Sbjct: 292 AKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIV 351
Query: 246 GVLSACSR-GGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMR 304
LSAC++ GGL E + ++D + + T +VD+ G ++ A ++ +
Sbjct: 352 SALSACAKIGGL--EAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETE 409
Query: 305 VKPDPGVWGALLNSCKLHGHVKLAELALEKLI 336
K W ++ +HGH + A ++++
Sbjct: 410 QK-SIRTWTVMIWGWAIHGHSEQAIACFKQMM 440
>gi|302823459|ref|XP_002993382.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
gi|300138813|gb|EFJ05567.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
Length = 655
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 194/545 (35%), Positives = 299/545 (54%), Gaps = 38/545 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GFG V+ L+H+Y+ C A +F+++ +NL + +I+AY + A ELY
Sbjct: 115 GFGTDLVVQNSLIHMYAKCGSFKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELY 174
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++L G++PD + + AL C I EG IH + ++ T V AL+ MY +
Sbjct: 175 KKMLSEGIMPDIYAYAAALAVC---PTIREGEAIHVKLGNHERRTPV-CSNALVGMYGRF 230
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ +A+ VFD I +D P+ T +V+
Sbjct: 231 GRIASAKWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVL 290
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A + + AL +G+E+H +V TALV+MYAKCG AR +F K V
Sbjct: 291 DACSKLGALTEGKEIHKKVKGGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVF 350
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W ++++ Y+ G S L+ +++M E V PD +TF + +ACS GL DEG ++F +M
Sbjct: 351 TWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAM 410
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
D+ I P HYTCM+DLLG GRL EA +L+ M PD W LL++CK++G +K+
Sbjct: 411 REDHWIVPLQPHYTCMIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKI 470
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
A +++ EL P D+G Y+++ N+YA+A W VA+++K++ RG+ K S IE +
Sbjct: 471 GARAYKRITELNPPDSGPYLLMGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKSMIEAQR 530
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSER 447
+ H F+ GD +HP EI A+L+ + ++ AGY P T+ V DV + K ++ HSER
Sbjct: 531 RIHEFVCGDTAHPLNQEIRARLQEVHEQLSHAGYEPDTKEVLVDVNEEVKPELLLFHSER 590
Query: 448 LAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICS 507
+A+ GL+ + G L I KNL+IC DCH K +SK+ R++ VRD +R+H F+ G CS
Sbjct: 591 MALGLGLLTSDAGATLHIVKNLRICPDCHSFFKLVSKMLHRKVLVRDSHRFHIFQRGSCS 650
Query: 508 CGDYW 512
CGDYW
Sbjct: 651 CGDYW 655
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 138/326 (42%), Gaps = 66/326 (20%)
Query: 35 QRNLFLWNVLIRAYAW-------------------------------NGPYEVAIELYYR 63
++ FL N L+RAY N ++ A++L+ +
Sbjct: 14 EKETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKK 73
Query: 64 LLEIGLVPDNFTFPFALKACSALSA--IEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ L + T+ LK+C+ L +E+G+ IH I + TD+ V +LI MYAKC
Sbjct: 74 SINEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKC 133
Query: 122 SCVVNARQVFDKILERD---------------------------PSEATLVTVISASADI 154
A VF+K+ ++ SE + + + +A +
Sbjct: 134 GSFKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAAL 193
Query: 155 AALP---QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWN 211
A P +G +H H V ALV MY + G + A+ +F+ +R K + S+N
Sbjct: 194 AVCPTIREGEAIHVKLGNHERRTPV-CSNALVGMYGRFGRIASAKWVFDGIRYKDLASYN 252
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
MI +A + +KA+ L+ +M+ ++P+ TF VL ACS+ G EG+ + V+
Sbjct: 253 NMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKK-VKG 311
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEA 296
V + T +V++ G EA
Sbjct: 312 GDQPTDVAYNTALVNMYAKCGSTHEA 337
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 38/194 (19%)
Query: 96 HEDVIRN--KWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD--------------- 138
HE +I + E + F+G L+ Y +C + +A F +I E++
Sbjct: 3 HERIIDANLEQEKETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQEND 62
Query: 139 ------------------PSEATLVTVISASADIAA--LPQGRELHGFSWRHRFELNVKV 178
++AT VTV+ + A + L G+E+H + F ++ V
Sbjct: 63 LHKKALQLFKKSINEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVV 122
Query: 179 KTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-V 237
+ +L+ MYAKCG K A +FE++ K ++S+ +MI Y +A +L++KM E +
Sbjct: 123 QNSLIHMYAKCGSFKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGI 182
Query: 238 QPDHITFVGVLSAC 251
PD + L+ C
Sbjct: 183 MPDIYAYAAALAVC 196
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 77/198 (38%), Gaps = 35/198 (17%)
Query: 182 LVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEK-MKDEVQPD 240
LV Y +C + A F ++ EK S+ M+ Y + KAL LF+K + +E+Q +
Sbjct: 23 LVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKKSINEELQQN 82
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
T+V VL +C+ G DY D H + G DL+
Sbjct: 83 QATYVTVLKSCAHLG-------------EDYLEDGKEIHRHAIAQGFG--------TDLV 121
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
+Q +L++ G K A EK +EP + +Y + Y A
Sbjct: 122 VQ----------NSLIHMYAKCGSFKFAAGVFEK---MEPKNLISYTSMIQAYTHTAKHV 168
Query: 361 GVAKLRKLMIDRGIKKSI 378
+L K M+ GI I
Sbjct: 169 EAYELYKKMLSEGIMPDI 186
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 188/468 (40%), Positives = 282/468 (60%), Gaps = 16/468 (3%)
Query: 57 AIELYYRLLEIGLV---------PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETD 107
A+ +Y + ++G V PD L A SA ++ R + + + + D
Sbjct: 165 AVSMYAAVGDVGAVRAAFAEIVSPDVVCVTAMLGALSAGGDVDTARELFDGMP----QRD 220
Query: 108 VFVGAALIDMYAKCSCVVNARQVFDKILERDP--SEATLVTVISASADIAALPQGRELHG 165
A++ Y + A +FD++ + SE TLV+V++A A + AL +G +H
Sbjct: 221 HVAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTACAQMGALERGMWVHS 280
Query: 166 FSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTK 225
+ ++V + TALVDMY+KCG+V ++ +FE +RE+ + +W + ++G AM+G +
Sbjct: 281 YVCSRGMRVSVTLGTALVDMYSKCGVVTMSMEVFETMRERNIYTWTSALSGLAMNGMGEE 340
Query: 226 ALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMV 284
L+LF++M+ ++P+ +TFV VL CS GL +EGR F+SM + ++P ++HY CMV
Sbjct: 341 CLELFKRMESAGMEPNGVTFVAVLRGCSVAGLVEEGRACFDSMKDKHKVEPWLEHYGCMV 400
Query: 285 DLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAG 344
DL G +GRLD+A D I M V+P GVWGALLN+ ++H +V L + A+ KL E+E +
Sbjct: 401 DLYGRAGRLDDAVDFINSMPVEPHEGVWGALLNASRIHNNVDLGKHAMHKLTEIESKNDA 460
Query: 345 NYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDE 404
+V+LSNIYA + NW+GV+K+R +M +G+KK CS IEV K H F G SHP +
Sbjct: 461 AHVLLSNIYAESHNWKGVSKVRNMMKSKGVKKMPGCSAIEVDGKVHEFFVGSKSHPRYKD 520
Query: 405 IYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPDGTRLL 464
I L + R++ GY T+ V D+E +EK I HSE+LA+AFGLI P+ T +
Sbjct: 521 IQTMLAEMSHRLRLQGYAANTKEVLFDIEEEEKEGAISLHSEKLALAFGLITLPEDTVIR 580
Query: 465 ITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
I KNL++C DCH K ISK+ +REI +RD NR+HHFK G CSC DYW
Sbjct: 581 IVKNLRVCKDCHDYTKLISKVFDREIVMRDRNRFHHFKHGACSCRDYW 628
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 37/219 (16%)
Query: 153 DIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKC----------------------- 189
D+A +H +++H + V++ V MYA
Sbjct: 136 DVAVNLLAGSVHAAAFQHGHATDPHVQSGAVSMYAAVGDVGAVRAAFAEIVSPDVVCVTA 195
Query: 190 --------GLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM-KDEVQPD 240
G V AR LF+ + ++ V+WNAM+TGY G S +AL LF++M K V
Sbjct: 196 MLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVS 255
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
+T V VL+AC++ G + G M+ S V + SV T +VD+ G + + ++
Sbjct: 256 EVTLVSVLTACAQMGALERG-MWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSMEVF 314
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELE 339
MR + + W + L+ ++G + E LE +E
Sbjct: 315 ETMRER-NIYTWTSALSGLAMNG---MGEECLELFKRME 349
>gi|413941558|gb|AFW74207.1| hypothetical protein ZEAMMB73_978994 [Zea mays]
Length = 580
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 208/515 (40%), Positives = 286/515 (55%), Gaps = 36/515 (6%)
Query: 34 PQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGR 93
P + FL+ L RA A G A+ Y LL L +F F KAC+ LSAI G
Sbjct: 66 PAPDSFLFCSLTRATARRGLPAAALAFYRCLLAAALPFSSFAFTSVAKACADLSAIRAGM 125
Query: 94 RIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERD--------------- 138
IH + ++ FV +L+ +Y+KC + AR++FD I ++
Sbjct: 126 GIHAHAVLLGLGSNRFVQTSLVVLYSKCGQLDVARKLFDAIRDKSVVAWNAMISGYEQNG 185
Query: 139 ------------------PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
P AT V +SA A AL GR++ R E+NV +
Sbjct: 186 LAGRAIEVYREMQMAGEAPDSATFVATLSACAQAGALDLGRQVDKLIVSERMEMNVVLGA 245
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDE-VQP 239
ALV+MYA+CGLV AR F L+E+ VV+W +MI GY MHGH +A+ LF M+ + P
Sbjct: 246 ALVNMYARCGLVNKAREWFNMLQERNVVTWTSMIAGYGMHGHGGEAVKLFNLMRQQGPPP 305
Query: 240 DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDL 299
+ +TFV VLSAC+ GL EGR F SM Y + P V+HY MVD+ G +G LD+A
Sbjct: 306 NDVTFVAVLSACAHAGLVSEGRDAFASMKSVYGLVPRVEHYCSMVDMYGRAGLLDDAMRF 365
Query: 300 IM-QMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAAN 358
I + +P P VW A+L +CK+H L E+LI LEP + V+LSN+YA +
Sbjct: 366 IHDSIPGEPGPEVWTAMLGACKMHKDFNLGVEVAERLIALEPESPSHRVLLSNLYALSGK 425
Query: 359 WEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKE 418
V K+R MI R +KK I S IE+ AH F G+ SHP EIY L+ L ++ +
Sbjct: 426 MNHVEKVRDTMIKRRLKKPIGYSLIEIAGVAHLFRMGEKSHPKTSEIYQYLEKLIEKITD 485
Query: 419 AGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINTPD-GTRLLITKNLKICDDCHI 477
GYVP T+SV H++E +E+ + H E+LA+AFGL+ T T + I KNL+IC+DCH+
Sbjct: 486 VGYVPKTDSVLHELEEEEREFALRYHGEKLAVAFGLMMTSGCTTPIRIIKNLRICEDCHL 545
Query: 478 AIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
AIK++S + REI VRD++R+HHFK G CSC +YW
Sbjct: 546 AIKYMSAVENREIIVRDMHRFHHFKAGKCSCQEYW 580
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 145/312 (46%), Gaps = 47/312 (15%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G G + + T LV LYS C L A +LFD I +++ WN +I Y NG AIE+
Sbjct: 134 LGLGSNRFVQTSLVVLYSKCGQLDVARKLFDAIRDKSVVAWNAMISGYEQNGLAGRAIEV 193
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
Y + G PD+ TF L AC+ A++ GR++ + ++ + E +V +GAAL++MYA+
Sbjct: 194 YREMQMAGEAPDSATFVATLSACAQAGALDLGRQVDKLIVSERMEMNVVLGAALVNMYAR 253
Query: 121 CSCVVNARQVFDKILERD---------------------------------PSEATLVTV 147
C V AR+ F+ + ER+ P++ T V V
Sbjct: 254 CGLVNKAREWFNMLQERNVVTWTSMIAGYGMHGHGGEAVKLFNLMRQQGPPPNDVTFVAV 313
Query: 148 ISASADIAALPQGRELHGFSWRHRFELNVKVK--TALVDMYAKCGLVKVA-RNLFEQLR- 203
+SA A + +GR+ S + + L +V+ ++VDMY + GL+ A R + + +
Sbjct: 314 LSACAHAGLVSEGRDAFA-SMKSVYGLVPRVEHYCSMVDMYGRAGLLDDAMRFIHDSIPG 372
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGR 261
E W AM+ MH +++ E++ + P H + L A S G+
Sbjct: 373 EPGPEVWTAMLGACKMHKDFNLGVEVAERLIALEPESPSHRVLLSNLYALS-------GK 425
Query: 262 MFFESMVRDYHI 273
M VRD I
Sbjct: 426 MNHVEKVRDTMI 437
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 209/581 (35%), Positives = 308/581 (53%), Gaps = 77/581 (13%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQ--RNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
L L+ Y++C C A ++FD IP ++ W L+ + + + A+ ++ +
Sbjct: 52 LHNALLQFYASCGCAWQARKVFDEIPHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRR 111
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC--- 123
G+ PD T C+ L + G + H +++ A++DMYAK
Sbjct: 112 CGVKPDEVTLVCLFGGCARLGDVVVGAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGE 171
Query: 124 ----------------------------VVNARQVFDKILERDP---------------- 139
V N R VFD++ ER+
Sbjct: 172 ARRVFYEMKGQSVVSWTVILDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLT 231
Query: 140 ------------------SEATLVTVISASADIAALPQGRELHGFSWRHR-FELNVKVKT 180
+ TL ++++A + L GR +H ++ + + ELN+ V T
Sbjct: 232 QESFALVREMIFDLEMELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGT 291
Query: 181 ALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPD 240
A+VDMYAKCG + +A F+++ ++ VVSWNAM++G AMHG ALD+F +M E +PD
Sbjct: 292 AMVDMYAKCGRIHIAFKFFKKMPQRNVVSWNAMLSGLAMHGLGRAALDIFPQMFKEAKPD 351
Query: 241 HITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLI 300
+TF VLSACS GL D+G +F ++ Y I P V+HY CMVDLLG +GRL+EA L+
Sbjct: 352 DVTFTSVLSACSHSGLVDQGCFYFGNLESVYGITPKVEHYACMVDLLGRAGRLEEAEILV 411
Query: 301 MQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWE 360
+M ++P+ V G+LL SC +HG ++L E L++L++L+P + +++LSN+YA A
Sbjct: 412 REMPIRPNEVVLGSLLGSCSIHGKLQLGEHLLQELVQLDPQNTEYHILLSNMYALAGKQN 471
Query: 361 GVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAG 420
LR+++ RGIKK S I V + H F +GD SHP E+Y L + R++ AG
Sbjct: 472 RANSLRQVLKKRGIKKVPGMSSIHVGGQVHQFSAGDKSHPRTREVYNMLDEMIPRLRLAG 531
Query: 421 YVP--------GTESVFHD-VENDEKANMICCHSERLAIAFGLINTPDGTRLLITKNLKI 471
Y P G +S+ D VE +EK + HSE+LAI FGLI+T G L I KNL+I
Sbjct: 532 YAPNTALQTFAGCDSLEDDLVEQEEKEQALFSHSEKLAICFGLISTGPGVPLHIFKNLRI 591
Query: 472 CDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
C DCH AIK +SKI REI +RD NR+H FK+G CSC DYW
Sbjct: 592 CQDCHSAIKIVSKIYNREIVIRDRNRFHCFKEGSCSCCDYW 632
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 141/348 (40%), Gaps = 76/348 (21%)
Query: 76 FPFALKACSALSAIEEGRRIHEDVIRN--KWETDVFVGAALIDMYAKCSCVVNARQVFDK 133
+ F L++C+ S+++ G R+H +I + F+ AL+ YA C C AR+VFD+
Sbjct: 16 YRFLLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCGCAWQARKVFDE 75
Query: 134 I--------------------------------LER---DPSEATLVTVISASADIAALP 158
I + R P E TLV + A + +
Sbjct: 76 IPHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGDVV 135
Query: 159 QGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNA------ 212
G + HG + K A++DMYAK GL+ AR +F +++ + VVSW
Sbjct: 136 VGAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVI 195
Query: 213 -------------------------MITGYAMHGHSTKALDLFEKM--KDEVQPDHITFV 245
MI GY G + ++ L +M E++ +++T
Sbjct: 196 RSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLC 255
Query: 246 GVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRV 305
+L+ACS+ G GR ++ + ++ T MVD+ GR+ A +M
Sbjct: 256 SILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKM-- 313
Query: 306 KPDPGV--WGALLNSCKLHGHVKLA-ELALEKLIELEPHDAGNYVILS 350
P V W A+L+ +HG + A ++ + E +P D +LS
Sbjct: 314 -PQRNVVSWNAMLSGLAMHGLGRAALDIFPQMFKEAKPDDVTFTSVLS 360
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 106/225 (47%), Gaps = 17/225 (7%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++ T +V +Y+ C +H A + F ++PQRN+ WN ++ A +G A++++ ++ +
Sbjct: 288 MVGTAMVDMYAKCGRIHIAFKFFKKMPQRNVVSWNAMLSGLAMHGLGRAALDIFPQMFKE 347
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIH---EDVIRNKWETDVFVGAALIDMYAKCSCV 124
PD+ TF L ACS +++G E V + + + A ++D+ + +
Sbjct: 348 A-KPDDVTFTSVLSACSHSGLVDQGCFYFGNLESVYGITPKVEHY--ACMVDLLGRAGRL 404
Query: 125 VNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL---NVKVKTA 181
A ++ + + P+E L +++ + + L G L + +L N +
Sbjct: 405 EEA-EILVREMPIRPNEVVLGSLLGSCSIHGKLQLGEHL----LQELVQLDPQNTEYHIL 459
Query: 182 LVDMYAKCGLVKVARNLFEQLRE---KRVVSWNAMITGYAMHGHS 223
L +MYA G A +L + L++ K+V +++ G +H S
Sbjct: 460 LSNMYALAGKQNRANSLRQVLKKRGIKKVPGMSSIHVGGQVHQFS 504
>gi|302800080|ref|XP_002981798.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
gi|300150630|gb|EFJ17280.1| hypothetical protein SELMODRAFT_115031 [Selaginella moellendorffii]
Length = 483
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 190/479 (39%), Positives = 276/479 (57%), Gaps = 34/479 (7%)
Query: 68 GLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNA 127
GL D TF ++AC+ L + G+ +H +I E D +G LI+MY++C A
Sbjct: 5 GLRGDRSTFTSVIEACACLPDLTLGQLLHYRMITLGCELDTVLGTNLINMYSRCDVPDKA 64
Query: 128 RQVFDKILERD---------------------------------PSEATLVTVISASADI 154
+VFD + + + V+ A++
Sbjct: 65 IEVFDAMHNKSVVVWTAMIAAHSQQGQGLEALELFKRMDIEGVRADKVAFSLVLDVCANL 124
Query: 155 AALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMI 214
AAL Q R LH E ++ VK LV+MY KCG + AR +FE++ K +VSW ++I
Sbjct: 125 AALAQARILHATVAGTELEQDMVVKNTLVNMYGKCGKLNEARQVFEKMASKDMVSWTSII 184
Query: 215 TGYAMHGHSTKALDLFEKMKDEVQP-DHITFVGVLSACSRGGLFDEGRMFFESMVRDYHI 273
YA G ++ A +LF M+ + D + FV V+S C+ GL + R +F SM++DY +
Sbjct: 185 AAYAQQGSASAAFELFHAMQQAGEAIDTVIFVKVMSGCNHAGLLKDARNWFVSMLQDYGL 244
Query: 274 DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALE 333
P ++Y C++DLLG G+L + DL+ M ++PD W + LN+CK+H +K A +
Sbjct: 245 SPVNENYACILDLLGRLGQLQDVEDLLENMTLEPDFIAWMSFLNACKVHKDMKRGVRAAQ 304
Query: 334 KLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFL 393
+L++L ++ +YV+LS+I+A ++ AKLR+ + KK SWIE+K+K H F
Sbjct: 305 RLVQLNRRNSASYVLLSDIHAVCGKFDAAAKLRRRIGRDCGKKVPGLSWIEIKDKVHKFA 364
Query: 394 SGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFG 453
SG +HP DEI+A+L+ L M+EAGYVP TE V DVE +EK ++C HSE+ A+AFG
Sbjct: 365 SGSRTHPRNDEIFAELQRLGVLMREAGYVPDTEVVLMDVEEEEKEQVLCYHSEKQAMAFG 424
Query: 454 LINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
LI+TP GT L + KNL++C DCH A KFISKIT R+ITVRD NR+H FKDG CSC DYW
Sbjct: 425 LISTPSGTPLRVVKNLRVCTDCHTATKFISKITGRQITVRDANRFHEFKDGFCSCKDYW 483
>gi|302795364|ref|XP_002979445.1| hypothetical protein SELMODRAFT_110780 [Selaginella moellendorffii]
gi|300152693|gb|EFJ19334.1| hypothetical protein SELMODRAFT_110780 [Selaginella moellendorffii]
Length = 637
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 201/550 (36%), Positives = 301/550 (54%), Gaps = 40/550 (7%)
Query: 3 FGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRN-LFLWNVLIRAYAWNGPYEVAIELY 61
F + L L+ +Y +C + A + FDRI RN WN +I YA N + A++L+
Sbjct: 88 FDGYTFLGNTLITMYGSCGDVDRAKKAFDRIDSRNNTVSWNSMIAGYAQNAFSKEALKLF 147
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
+ G P+ TF AL A L A+ EG IHE+V+ + ETD V ALI+ + KC
Sbjct: 148 KAMDLQGFQPNKVTFVSALDAAGNLGALPEGSAIHEEVLEHDCETDTAVATALINFFGKC 207
Query: 122 SCVVNA-----RQVFDKILERD---------------------------------PSEAT 143
+ + +FD++ +RD P+ T
Sbjct: 208 PYCQSGDPHQVQAIFDRMRDRDDVSWSTLVGAYAQSNQHRTSMELFKKMDVEGYKPTRFT 267
Query: 144 LVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLR 203
++V+ A ++AL +GR LH + +V ++ +V+M+ +CG V+ + + F+++
Sbjct: 268 FMSVVDACGKLSALREGRVLHSSIMNSALKWDVVLQNGIVNMFGRCGSVEESSSAFQEML 327
Query: 204 EKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRM 262
++ VSW+ MI+ +A +GH +AL+ F M D PD +TFV +LS C+ GL + R
Sbjct: 328 QRDAVSWSIMISAFAHNGHGAEALETFLAMNLDGQTPDELTFVSILSVCAHAGLLRDARG 387
Query: 263 FFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLH 322
MV DY + P + HY C+VDLL SGRL A +L+ M +P W LL +CK+
Sbjct: 388 HLVDMVGDYALVPGLDHYVCLVDLLCRSGRLGAAEELVETMPYEPHGSAWLTLLAACKMQ 447
Query: 323 GHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSW 382
G +K + + +P + Y +LS+IYA A + +RK M +RGIKK CS+
Sbjct: 448 GDLKRGARVGKSFLATDPDTSAPYALLSSIYAEAKRVNEMRIVRKAMEERGIKKQAGCSY 507
Query: 383 IEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMIC 442
IEV ++ H F +G+ SHP +I +L ++ +M EAG V T V +D+E +EK N++
Sbjct: 508 IEVHDRVHEFKAGEVSHPRHRDILYELMQIQRKMVEAGCVRDTRLVSYDLEEEEKENLLT 567
Query: 443 CHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFK 502
HSE+LAI GL+ T GT L + KNL++C DCH AIKFIS+I R I VRD NR+HHF+
Sbjct: 568 YHSEKLAIGLGLVTTRPGTELRVVKNLRVCSDCHTAIKFISRICGRRIVVRDCNRFHHFE 627
Query: 503 DGICSCGDYW 512
DG+CSC DYW
Sbjct: 628 DGVCSCNDYW 637
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 141/294 (47%), Gaps = 42/294 (14%)
Query: 71 PDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQV 130
PD T+ L+ C++ A++ G+ +HE++ R +++ F+G LI MY C V A++
Sbjct: 55 PDLETYASLLRQCASARALDLGQLLHEEIARRRFDGYTFLGNTLITMYGSCGDVDRAKKA 114
Query: 131 FDKILERD----------------------------------PSEATLVTVISASADIAA 156
FD+I R+ P++ T V+ + A+ ++ A
Sbjct: 115 FDRIDSRNNTVSWNSMIAGYAQNAFSKEALKLFKAMDLQGFQPNKVTFVSALDAAGNLGA 174
Query: 157 LPQGRELHGFSWRHRFELNVKVKTALVDMYAKC-----GLVKVARNLFEQLREKRVVSWN 211
LP+G +H H E + V TAL++ + KC G + +F+++R++ VSW+
Sbjct: 175 LPEGSAIHEEVLEHDCETDTAVATALINFFGKCPYCQSGDPHQVQAIFDRMRDRDDVSWS 234
Query: 212 AMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRD 270
++ YA +++LF+KM E +P TF+ V+ AC + EGR+ S++ +
Sbjct: 235 TLVGAYAQSNQHRTSMELFKKMDVEGYKPTRFTFMSVVDACGKLSALREGRVLHSSIM-N 293
Query: 271 YHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGH 324
+ V +V++ G G ++E+ +M ++ D W ++++ +GH
Sbjct: 294 SALKWDVVLQNGIVNMFGRCGSVEESSSAFQEM-LQRDAVSWSIMISAFAHNGH 346
>gi|359481819|ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
Length = 977
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 183/483 (37%), Positives = 285/483 (59%), Gaps = 46/483 (9%)
Query: 64 LLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
+L+ G+ PD+ FP A KAC LS + G+ +H ++ ++ DVFVG++++DMYAKC
Sbjct: 1 MLDNGVRPDDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGE 60
Query: 124 VVNARQVFDKILER---------------------------------DPSEATLVTVISA 150
+ +AR++FD++ +R D ++ T +V+
Sbjct: 61 IGDARKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRV 120
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
+ L G+++HG + ++ + V ++L+ +Y+KCG+++ A +F ++ + + W
Sbjct: 121 CGNSTLLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMW 180
Query: 211 NAMITGYAMHGHSTKALDLFEKMKD-EVQPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
NAM+ A H H+ KA DLF++M+ ++P+ ITF+ VL ACS GL ++G+ +FE M +
Sbjct: 181 NAMLIACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQFYFELM-K 239
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
+Y I+P QHY MVDLLG +G+L +A +I +M ++P VWGALL C++HG +LA
Sbjct: 240 EYGIEPGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTESVWGALLTGCRIHGDTELAS 299
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
+++ EL P + + A +E A+ RK++ D+G+KK SW+E N+
Sbjct: 300 FVADRVFELGP-----------VSSAAGRYEEAARARKMLRDQGVKKETGLSWVEEGNRI 348
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLA 449
H F +GD SHP +IY KL+ L M+ AGY+ T V +V+ +EK I HSERLA
Sbjct: 349 HTFAAGDRSHPYTKDIYKKLEELGEEMERAGYIADTSFVLQEVDGEEKNQTIRYHSERLA 408
Query: 450 IAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
IAFGLI+ P + + KNL++C DCH AIKF+SK R I VRD NR+H F+DG CSC
Sbjct: 409 IAFGLISFPPERPIRVMKNLRVCGDCHTAIKFMSKCCGRTIIVRDNNRFHRFEDGNCSCR 468
Query: 510 DYW 512
DYW
Sbjct: 469 DYW 471
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 120/252 (47%), Gaps = 34/252 (13%)
Query: 9 LATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIG 68
+ + +V +Y+ C + +A ++FD +P RN+ W+ +I Y+ G E A+ L+ + L
Sbjct: 47 VGSSMVDMYAKCGEIGDARKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIED 106
Query: 69 LVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNAR 128
L ++FTF ++ C + +E G++IH ++ +++ FVG++LI +Y+KC + +A
Sbjct: 107 LDVNDFTFSSVVRVCGNSTLLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAY 166
Query: 129 QVFDKILERD---------------------------------PSEATLVTVISASADIA 155
VF +I R+ P+ T + V+ A +
Sbjct: 167 LVFHEIPIRNLGMWNAMLIACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVLYACSHAG 226
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVS-WNAMI 214
+ +G+ + E + ++VD+ + G +K A ++ +++ + S W A++
Sbjct: 227 LVEKGQFYFELMKEYGIEPGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTESVWGALL 286
Query: 215 TGYAMHGHSTKA 226
TG +HG + A
Sbjct: 287 TGCRIHGDTELA 298
>gi|125535994|gb|EAY82482.1| hypothetical protein OsI_37700 [Oryza sativa Indica Group]
Length = 584
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 223/547 (40%), Positives = 311/547 (56%), Gaps = 36/547 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G G L TKL L A AH L P + FL + L RA A G AI Y
Sbjct: 38 GHGGSLPLVTKLATLAVAAGAAPYAHLLAASHPACDSFLLSSLARAAAHRGLPGEAIAFY 97
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
RLL L +F F A KAC+ LSA+ G +H + + +D FV AL+ +Y+KC
Sbjct: 98 GRLLAAALPFSSFAFTAAAKACADLSALRTGMAVHAHSVLLGFGSDRFVQTALVVLYSKC 157
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
+ AR++FD I +R P AT VT +
Sbjct: 158 GQLPVARKLFDAIRDRSVVAWNAMISGYEQNGLAERAIEVYREMQVAQVVPDSATFVTTL 217
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
SA A AL GRE+ + +++V + +ALV+MYA+CGLV AR+ F++L+E+ VV
Sbjct: 218 SACAQAGALDLGREVERRIVSDQMDVSVFLGSALVNMYARCGLVSKARDWFDRLQERNVV 277
Query: 209 SWNAMITGYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W +MI GY MHGH +A+ LF M+ E P+ +TFV VL+AC+ GL +EGR F+SM
Sbjct: 278 TWTSMIAGYGMHGHGCEAIKLFHLMRLEGPTPNDVTFVAVLAACAHAGLVNEGRSAFDSM 337
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIM-QMRVKPDPGVWGALLNSCKLHGHVK 326
R Y + P +HY MVD+ G +G LD+A I + +P P VW A+L +CK+H +
Sbjct: 338 KRVYGLVPRAEHYCSMVDMYGRAGLLDDAMQFIRDSIPGEPGPEVWTAMLGACKMHKNFN 397
Query: 327 LAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVK 386
L E+LI LEP + + V+LSNIYA + V K+R +MI R +KK I S IE+
Sbjct: 398 LGVEVAERLIALEPENPSHRVLLSNIYALSGKMNHVEKVRNVMIKRRLKKQIGYSLIELG 457
Query: 387 NKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSE 446
+H F G+ SH EIY L+ L R+ +AGYVP T+SV H++E +E+ + HSE
Sbjct: 458 GTSHLFRMGEKSHQQTREIYQYLEELIHRISDAGYVPETDSVLHELEEEEREVALRYHSE 517
Query: 447 RLAIAFGL-INTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGI 505
+LA+A+GL +++ T + + KNL+IC DCH+AIKF+S + REI VRD +R+HHFKDG
Sbjct: 518 KLAVAYGLMMSSGSTTPIRVIKNLRICGDCHLAIKFMSSVESREIIVRDKHRFHHFKDGK 577
Query: 506 CSCGDYW 512
CSC +YW
Sbjct: 578 CSCLEYW 584
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 154/323 (47%), Gaps = 23/323 (7%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+GFG + T LV LYS C L A +LFD I R++ WN +I Y NG E AIE+
Sbjct: 138 LGFGSDRFVQTALVVLYSKCGQLPVARKLFDAIRDRSVVAWNAMISGYEQNGLAERAIEV 197
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
Y + +VPD+ TF L AC+ A++ GR + ++ ++ + VF+G+AL++MYA+
Sbjct: 198 YREMQVAQVVPDSATFVTTLSACAQAGALDLGREVERRIVSDQMDVSVFLGSALVNMYAR 257
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKT 180
C V AR FD++ ER+ +VT S A G E R E
Sbjct: 258 CGLVSKARDWFDRLQERN-----VVTWTSMIAGYGMHGHGCEAIKLFHLMRLEGPTPNDV 312
Query: 181 ALVDMYAKC---GLVKVARNLFEQLRE-----KRVVSWNAMITGYAMHGHSTKALDLFEK 232
V + A C GLV R+ F+ ++ R + +M+ M+G + D +
Sbjct: 313 TFVAVLAACAHAGLVNEGRSAFDSMKRVYGLVPRAEHYCSMVD---MYGRAGLLDDAMQF 369
Query: 233 MKDEV--QPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHS 290
++D + +P + +L AC F+ G E ++ +PS H + ++ S
Sbjct: 370 IRDSIPGEPGPEVWTAMLGACKMHKNFNLGVEVAERLIALEPENPS--HRVLLSNIYALS 427
Query: 291 GRL---DEACDLIMQMRVKPDPG 310
G++ ++ +++++ R+K G
Sbjct: 428 GKMNHVEKVRNVMIKRRLKKQIG 450
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 193/546 (35%), Positives = 301/546 (55%), Gaps = 35/546 (6%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
GF + L+ +Y+ C + A +F+ + ++ WN +I Y +G A++L+
Sbjct: 337 GFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLF 396
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKC 121
++ + D+ T+ + + L+ ++ G+ +H + I++ D+ V ALIDMYAKC
Sbjct: 397 KMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKC 456
Query: 122 SCVVNARQVFDKILERD---------------------------------PSEATLVTVI 148
V ++ ++F+ + D P AT + +
Sbjct: 457 GEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTL 516
Query: 149 SASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVV 208
A +AA G+E+H R +E +++ AL++MY+KCG ++ + +FE++ + VV
Sbjct: 517 PMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVV 576
Query: 209 SWNAMITGYAMHGHSTKALDLFEKM-KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESM 267
+W MI Y M+G KAL+ F M K + PD + F+ ++ ACS GL ++G FE M
Sbjct: 577 TWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKM 636
Query: 268 VRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKL 327
Y IDP ++HY C+VDLL S ++ +A + I M ++PD +W ++L +C+ G ++
Sbjct: 637 KTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMET 696
Query: 328 AELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKN 387
AE ++IEL P D G ++ SN YA W+ V+ +RK + D+ IKK+ SWIE+
Sbjct: 697 AERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGK 756
Query: 388 KAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDV-ENDEKANMICCHSE 446
K H F SGD S P + I+ L+ L M + GY+P + V ++ E +EK +IC HSE
Sbjct: 757 KVHVFCSGDDSAPQSEAIHKSLEILYSLMAKEGYIPDSREVSQNLEEEEEKRRLICGHSE 816
Query: 447 RLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGIC 506
RLAIAFGL+NT GT L + KNL++C DCH K ISKI REI VRD NR+H FKDGIC
Sbjct: 817 RLAIAFGLLNTEPGTPLQVMKNLRVCSDCHEVTKLISKIVGREILVRDANRFHLFKDGIC 876
Query: 507 SCGDYW 512
SC D W
Sbjct: 877 SCKDRW 882
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 198/414 (47%), Gaps = 43/414 (10%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRI-PQRNLFLWNVLIRAYAWNGPYEVAIE 59
+G + KL+ YS ++ +F R+ P +N+++WN +IRA++ NG + A+E
Sbjct: 33 LGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSIIRAFSKNGWFPKALE 92
Query: 60 LYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYA 119
Y +L E + PD +TFP +KAC+ L E G +++ ++ +E+D++VG AL+DMY+
Sbjct: 93 FYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYS 152
Query: 120 KCSCVVNARQVFDKILERD---------------------------------PSEATLVT 146
+ + ARQVFD++ RD P T+ +
Sbjct: 153 RMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSS 212
Query: 147 VISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKR 206
V+ A A++ + QG+ LHGF+ + V L+ MY K AR +F+++ +
Sbjct: 213 VLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRD 272
Query: 207 VVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLFDEGRMFFES 266
V++N MI GY +++ +F + D+ +PD +T VL AC + +
Sbjct: 273 SVTYNTMICGYLKLEMVEESVKMFLENLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNY 332
Query: 267 MVR-DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHV 325
M+R + ++ +V++ ++D+ G + A D+ M K D W ++++ G +
Sbjct: 333 MLRAGFVLESTVKN--ILIDVYAKCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGDL 389
Query: 326 KLAELALEKLIELEPH-DAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSI 378
A + ++ +E D Y++L ++ R A+ K K + GIK I
Sbjct: 390 MEAMKLFKMMMIMEEQADHITYLMLISLSTRLADL----KFGKGLHSNGIKSGI 439
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 35/219 (15%)
Query: 78 FALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMY----AKCSCVVNARQV--- 130
F +A S+ S + E RRIH VI + F LID Y A S + R+V
Sbjct: 9 FISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPA 68
Query: 131 ------------------FDKILE---------RDPSEATLVTVISASADIAALPQGREL 163
F K LE P + T +VI A A + G +
Sbjct: 69 KNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 164 HGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHS 223
+ FE ++ V ALVDMY++ GL+ AR +F+++ + +VSWN++I+GY+ HG+
Sbjct: 129 YKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 224 TKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGR 261
+AL+++ ++++ + PD T VL A + + +G+
Sbjct: 189 EEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQ 227
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 197/543 (36%), Positives = 301/543 (55%), Gaps = 41/543 (7%)
Query: 8 VLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEI 67
++ T L+ +Y+ C L A ++F+ + RN W+ L+ + G A L+ +L
Sbjct: 269 LVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQ 328
Query: 68 GLVPDNFTFPF----ALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSC 123
GL F P AL+AC+ LS + G+++H + ++ TD+ G +L+ MYAK
Sbjct: 329 GLC---FLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGL 385
Query: 124 VVNARQVFDKILERD---------------------------------PSEATLVTVISA 150
+ A +FD+++ +D P AT+V++I A
Sbjct: 386 IDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPA 445
Query: 151 SADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
+ +AAL G+ HG + AL+DMYAKCG + ++R +F+ + + +VSW
Sbjct: 446 CSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSW 505
Query: 211 NAMITGYAMHGHSTKALDLFEKMKDEV-QPDHITFVGVLSACSRGGLFDEGRMFFESMVR 269
N MI GY +HG +A LF MK + +PD +TF+ ++SACS GL EG+ +F M
Sbjct: 506 NTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAH 565
Query: 270 DYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAE 329
Y I P ++HY MVDLL G LDEA I M +K D VWGALL +C++H ++ L +
Sbjct: 566 KYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGK 625
Query: 330 LALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKA 389
+ +L P GN+V+LSNI++ A ++ A++R + ++G KKS CSWIE+
Sbjct: 626 QVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSL 685
Query: 390 HAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLA 449
HAF+ GD SH EIY +L + + + GY T V DVE +EK + HSE+LA
Sbjct: 686 HAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSFVLQDVEEEEKEKALLYHSEKLA 745
Query: 450 IAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCG 509
IAFG++ + + +TKNL++C DCH IK+++ + +R I VRD NR+HHFK+G CSCG
Sbjct: 746 IAFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKRAIIVRDANRFHHFKNGQCSCG 805
Query: 510 DYW 512
D+W
Sbjct: 806 DFW 808
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 167/390 (42%), Gaps = 81/390 (20%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLE 66
P + ++ H C L A LFD+IP + +N LIRAY+ GP
Sbjct: 63 PHIICQIDHNRMICGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRR 122
Query: 67 IGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVN 126
P+N+TFPF LKACSAL + R +H R D+FV AL+D+YAKC+ +
Sbjct: 123 RLPQPNNYTFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRH 182
Query: 127 ARQVFDKILERD--------------------------------PSEATLVTVISASADI 154
A VF ++ RD P+ +TLV ++ A
Sbjct: 183 AATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNASTLVALLPLLAQH 242
Query: 155 AALPQGRELHGFSWR----HRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSW 210
AL QGR +H +S R H + V V TAL+DMYAKCG + A +FE + + V+W
Sbjct: 243 GALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTW 302
Query: 211 NAMITGYAMHGHSTKALDLFEKM------------------------------------- 233
+A++ G+ + G +A LF+ M
Sbjct: 303 SALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLA 362
Query: 234 KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRL 293
K + D +LS ++ GL D+ F+ MV + +V Y+ +V +G+
Sbjct: 363 KSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMV----VKDTVS-YSALVSGYVQNGKA 417
Query: 294 DEACDLIMQMR---VKPDPGVWGALLNSCK 320
DEA + +M+ V+PD +L+ +C
Sbjct: 418 DEAFRVFRKMQACNVQPDVATMVSLIPACS 447
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 89/189 (47%), Gaps = 4/189 (2%)
Query: 138 DPSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
P+ T V+ A + + L R +H + R ++ V TALVD+YAKC + A
Sbjct: 126 QPNNYTFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAAT 185
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKDEVQPDHITFVGVLSACSRGGLF 257
+F ++ + VV+WNAM+ GYA+HG + + M+D+ P+ T V +L ++ G
Sbjct: 186 VFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNASTLVALLPLLAQHGAL 245
Query: 258 DEGRMFFESMVRDYHI---DPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGA 314
+GR VR + V T ++D+ G L A + M V+ + W A
Sbjct: 246 SQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEV-TWSA 304
Query: 315 LLNSCKLHG 323
L+ L G
Sbjct: 305 LVGGFVLCG 313
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%)
Query: 2 GFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELY 61
G + L+ +Y+ C + + Q+FD +P R++ WN +I Y +G + A L+
Sbjct: 466 GIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALF 525
Query: 62 YRLLEIGLVPDNFTFPFALKACSALSAIEEGRR 94
+ PD+ TF + ACS + EG+R
Sbjct: 526 LDMKHQACEPDDVTFICLISACSHSGLVTEGKR 558
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 205/556 (36%), Positives = 299/556 (53%), Gaps = 66/556 (11%)
Query: 23 LHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKA 82
L +A +L R P RN+ W LI Y+ G A++ + +L G+ PD T L A
Sbjct: 187 LDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSA 246
Query: 83 CSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCS-------------------- 122
C L + G +H V + + ALIDMYAKC
Sbjct: 247 CGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQP 306
Query: 123 --------CVVN----ARQVFDKILERD-------------------------------- 138
C V AR +FD++ + D
Sbjct: 307 WNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGL 366
Query: 139 -PSEATLVTVISASADIAALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARN 197
T+V +++ASA + ALPQGR LH + E +V + TAL+DMY KCG V+ A
Sbjct: 367 GADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMV 426
Query: 198 LFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMK-DEVQPDHITFVGVLSACSRGGL 256
F+Q+ + V +W+AMI G A +G AL+ F MK D + +T++ VL+ACS L
Sbjct: 427 AFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCL 486
Query: 257 FDEGRMFFESMVRDYHIDPSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALL 316
DEGR++F+ M ++I P ++HY CM+DLLG SG LDEA DL+ M ++P+ +W ++L
Sbjct: 487 LDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQPNAVIWASIL 546
Query: 317 NSCKLHGHVKLAELALEKLIELEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKK 376
++C++H +V LA+ A L++LEP + YV + NIY + WE +K+R+LM RG+KK
Sbjct: 547 SACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYNIYIDSRQWEDASKIRRLMEKRGVKK 606
Query: 377 SIACSWIEVKNKAHAFLSGDASHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDE 436
+ S I V + H F+ GD SHP EI ++ + R+K AGY P T + DV+ +E
Sbjct: 607 TAGYSSIAVAGQVHKFIVGDRSHPQIAEIVVMMEEIGRRLKSAGYSPITSQITVDVDEEE 666
Query: 437 KANMICCHSERLAIAFGLINTPDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVN 496
K + HSE+LAIAFGL++ + I KNL++C+DCH AIK IS++ REI VRD +
Sbjct: 667 KEQALLAHSEKLAIAFGLVSLAPNLPVHIIKNLRVCEDCHSAIKLISRLWNREIIVRDRS 726
Query: 497 RYHHFKDGICSCGDYW 512
R+HHF+ G+CSC D+W
Sbjct: 727 RFHHFRGGVCSCNDFW 742
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 152/354 (42%), Gaps = 70/354 (19%)
Query: 7 PVLATKLVHLYSACDCLHNAHQLFD-------------------------------RIPQ 35
P++A+ ++H+Y+ +A + FD R P
Sbjct: 140 PLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLLDDARRLLARAPV 199
Query: 36 RNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRI 95
RN+ W LI Y+ G A++ + +L G+ PD T L AC L + G +
Sbjct: 200 RNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSL 259
Query: 96 HEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIA 155
H V + + ALIDMYAKC AR+VFD
Sbjct: 260 HMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFD----------------------- 296
Query: 156 ALPQGRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMIT 215
AL +GR W A++D Y K G V +AR+LF+Q+ + V+++N++IT
Sbjct: 297 ALGRGRGPQ--PW-----------NAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLIT 343
Query: 216 GYAMHGHSTKALDLFEKMKDE-VQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHID 274
GY G +AL LF KM+ + D+ T VG+L+A + G +GR + + ++
Sbjct: 344 GYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRA-LHACIEQRLVE 402
Query: 275 PSVQHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLA 328
V T ++D+ GR++EA QM V+ D W A++ +G K A
Sbjct: 403 RDVYLGTALLDMYMKCGRVEEAMVAFKQMSVR-DVHTWSAMIGGLAFNGMGKAA 455
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 169/364 (46%), Gaps = 62/364 (17%)
Query: 5 FHPVLATKLVHLYSAC----DCLH--NAHQLFDRIPQRNLFLWNVLIRA--YAWNGPYEV 56
HP A L++ ++C D LH A LFDR+P + FL++ +RA A +GP +
Sbjct: 29 LHPPSAAHLLNSLTSCISPSDPLHLRYALSLFDRMPC-STFLFDTALRACFRASSGP-DR 86
Query: 57 AIELYYRLLEIGLVPDNFTFPFALKACSALSA-IEEGRRIHEDVIRNKWETDV-FVGAAL 114
I LY R+ + + PD FTF F K C+ A + GR +H R + V + + +
Sbjct: 87 PIILYRRMHGVDVPPDAFTFHFLFKCCARGGAHVLLGRMLHAACFRTLLPSAVPLIASPI 146
Query: 115 IDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFSWRHRFEL 174
I MYA+ +AR+ FD EA++ V++ W
Sbjct: 147 IHMYAELGLPGDARRAFD--------EASVKDVVA------------------W------ 174
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKM- 233
T ++ AK GL+ AR L + + VV+W +I+GY+ G + +A+D F M
Sbjct: 175 -----TTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSML 229
Query: 234 KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDLL---GHS 290
D + PD +T +G+LSAC + + G +V D + S + ++D+ G +
Sbjct: 230 SDGIAPDEVTVIGMLSACGQLKDLNFG-CSLHMLVGDKRMLMSDKLVVALIDMYAKCGDT 288
Query: 291 GRLDEACDLIMQMRVKPDPGVWGALLNS-CKLHGHVKLAELALEKLIELEPHDAGNYVIL 349
GR E D + + R P P W A+++ CK+ GHV +A + ++E HD + L
Sbjct: 289 GRAREVFDALGRGR-GPQP--WNAMIDGYCKV-GHVDIARSLFD---QMEDHDVITFNSL 341
Query: 350 SNIY 353
Y
Sbjct: 342 ITGY 345
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 118/262 (45%), Gaps = 21/262 (8%)
Query: 1 MGFGFHPVLATKLVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIEL 60
+G G P ++ Y + A LFD++ ++ +N LI Y G A+ L
Sbjct: 298 LGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLL 357
Query: 61 YYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAK 120
+ ++ GL DNFT L A ++L A+ +GR +H + + E DV++G AL+DMY K
Sbjct: 358 FTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMK 417
Query: 121 CSCVVNARQVFDKILERDPSEATLVTVISASADIAALP---QGR-ELHGFSWRH--RFEL 174
C V A F ++ RD V + SA I L G+ L F W F
Sbjct: 418 CGRVEEAMVAFKQMSVRD--------VHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHA 469
Query: 175 NVKVKTALVDMYAKCGLVKVARNLFEQLR-----EKRVVSWNAMITGYAMHGHSTKALDL 229
N A++ + L+ R F+++R ++ + MI G +A+DL
Sbjct: 470 NSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDL 529
Query: 230 FEKMKDEVQPDHITFVGVLSAC 251
+ M +QP+ + + +LSAC
Sbjct: 530 VQTMP--MQPNAVIWASILSAC 549
>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 565
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 188/535 (35%), Positives = 299/535 (55%), Gaps = 35/535 (6%)
Query: 13 LVHLYSACDCLHNAHQLFDRIPQRNLFLWNVLIRAYAWNGPYEVAIELYYRLLEIGLVPD 72
L++ Y L +A ++FD +P R L WN +I E + L+ + +G PD
Sbjct: 31 LINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMHGLGFSPD 90
Query: 73 NFTFPFALKACSALSAIEEGRRIHEDVIRNKWETDVFVGAALIDMYAKCSCVVNARQVFD 132
+T + L ++ G++IH I+ E D+ V ++L MY + + + V
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150
Query: 133 KILERD---------------------------------PSEATLVTVISASADIAALPQ 159
+ R+ P++ T VTV+S+ +D+A Q
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210
Query: 160 GRELHGFSWRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAM 219
G+++H + + V V ++L+ MY+KCG + A F + ++ V W++MI+ Y
Sbjct: 211 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 270
Query: 220 HGHSTKALDLFEKM--KDEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSV 277
HG +A+ LF M + E++ + + F+ +L ACS GL D+G F+ MV Y P +
Sbjct: 271 HGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGL 330
Query: 278 QHYTCMVDLLGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIE 337
+HYTC+VDLLG +G LD+A +I M +KPDP +W LL++C +H + ++A+ ++++E
Sbjct: 331 KHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKEILE 390
Query: 338 LEPHDAGNYVILSNIYARAANWEGVAKLRKLMIDRGIKKSIACSWIEVKNKAHAFLSGDA 397
++P+D+ YV+L+N++A A W V+++RK M D+ +KK SW E K + H F GD
Sbjct: 391 IDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDR 450
Query: 398 SHPNCDEIYAKLKWLEGRMKEAGYVPGTESVFHDVENDEKANMICCHSERLAIAFGLINT 457
S EIY+ LK L MK GY P T SV HD++ +EK + + HSE+LA+AF L+
Sbjct: 451 SQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMIL 510
Query: 458 PDGTRLLITKNLKICDDCHIAIKFISKITEREITVRDVNRYHHFKDGICSCGDYW 512
P+G + I KNL++C DCH+A K+IS I REIT+RD +R+HHF +G CSCGDYW
Sbjct: 511 PEGAPIRIIKNLRVCSDCHVAFKYISVIMNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 140/308 (45%), Gaps = 9/308 (2%)
Query: 48 YAWNGPYEVAIELYYRLLEIGLVPDNFTFPFALKACSALSAIEEGRRIHEDVIRNKWETD 107
Y+ G A+ LY R+ + + N ++A +SA R++ +++ K T
Sbjct: 4 YSKLGDLPSAVALYERMRKKNFMSSNILINGYVRAGDLVSA----RKVFDEMPDRKLTTW 59
Query: 108 VFVGAALIDMYAKCSCVVNARQVFDKILERDPSEATLVTVISASADIAALPQGRELHGFS 167
+ A LI + R++ L P E TL +V S SA + ++ G+++HG++
Sbjct: 60 NAMIAGLIQFEYNEEGLSLFREMHG--LGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYA 117
Query: 168 WRHRFELNVKVKTALVDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKAL 227
++ EL++ V ++L MY + G ++ + + + +V+WN +I G A +G L
Sbjct: 118 IKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVL 177
Query: 228 DLFEKMK-DEVQPDHITFVGVLSACSRGGLFDEGRMFFESMVRDYHIDPSVQHYTCMVDL 286
L++ MK +P+ ITFV VLS+CS + +G+ ++ V + ++ +
Sbjct: 178 YLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK-IGASSVVAVVSSLISM 236
Query: 287 LGHSGRLDEACDLIMQMRVKPDPGVWGALLNSCKLHGHVKLAELALEKLIELEPHDAGNY 346
G L +A + R D +W +++++ HG A + E +
Sbjct: 237 YSKCGCLGDAAKAFSE-REDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEV 295
Query: 347 VILSNIYA 354
L+ +YA
Sbjct: 296 AFLNLLYA 303
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 183 VDMYAKCGLVKVARNLFEQLREKRVVSWNAMITGYAMHGHSTKALDLFEKMKD 235
+ MY+K G + A L+E++R+K +S N +I GY G A +F++M D
Sbjct: 1 MSMYSKLGDLPSAVALYERMRKKNFMSSNILINGYVRAGDLVSARKVFDEMPD 53
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.139 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,241,705,772
Number of Sequences: 23463169
Number of extensions: 337378469
Number of successful extensions: 1149196
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7571
Number of HSP's successfully gapped in prelim test: 3589
Number of HSP's that attempted gapping in prelim test: 1021739
Number of HSP's gapped (non-prelim): 58112
length of query: 512
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 365
effective length of database: 8,910,109,524
effective search space: 3252189976260
effective search space used: 3252189976260
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 79 (35.0 bits)