BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043144
(580 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/577 (75%), Positives = 499/577 (86%), Gaps = 10/577 (1%)
Query: 7 KVHVGCKVSFSVQSADSVDFKKHKGFQKQRQNRVFAISKVETLSFNVKMKHGEAFVQGHL 66
K+ V C+ S S+ S + +K + R V A SKVE+ N + + E G+
Sbjct: 29 KLDVSCRTSGSISSKIPLGSRK-----RNRLVLVSAASKVESSGLNGRAQKFETLSSGYS 83
Query: 67 N---NGHISSGMENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCT 123
N NGH SS NSS ED ESNNHLR++VR GELEEGFKFLE+MVYHG++PDIIPCT
Sbjct: 84 NSNGNGHYSS--VNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCT 141
Query: 124 SLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERMSVA 183
+LIRGFC++GKTRKA +++EI+E SGAVPDVITYNV+ISGYC+ GEI+NAL VL+RMSV+
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS 201
Query: 184 PDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKL 243
PDVVTYNTILR+LCDSGKL AMEVL + L+++CYPDVITYTILIEATC++SGVG AMKL
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 244 LDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCS 303
LDEMR++GC PDVVTYNVLVNGICKEGRLDEAIKFLNDMPS GCQPNVITHNIILRSMCS
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 304 TGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLS 363
TGRWMDAE+LLA+M+ KG SPSVVTFNILINFLCRKGLLGRAIDILEKMP+HGC PNSLS
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 364 YNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS 423
YNP+LHGFCKEKKMDRAIEYLE MVSRGCYPDIVTYNT+LTALCKDGKV+ AVEILNQLS
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 424 NKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVD 483
+K CSPVLITYNTVIDGL+K GKT +A+KLL+EMR K LKPDTITYSSLVGGLSREGKVD
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Query: 484 EAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILI 543
EAIK FH+ ER+G+RPN +T+NSIMLGLCK+RQT RAID L M+ R CKP E +YTILI
Sbjct: 502 EAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Query: 544 EGIAYEGLAKEALDLLNQLCSRGVVKKSSAEQVAVKM 580
EG+AYEG+AKEAL+LLN+LC++G++KKSSAEQVA KM
Sbjct: 562 EGLAYEGMAKEALELLNELCNKGLMKKSSAEQVAGKM 598
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 463 bits (1191), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/503 (44%), Positives = 330/503 (65%), Gaps = 4/503 (0%)
Query: 77 NSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTR 136
+ SL F D + R R+G E LE+MV G PD+I CT LI+GF +
Sbjct: 82 SQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIP 141
Query: 137 KATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTIL 193
KA RVMEI+E G PDV YN LI+G+C++ ID+A +VL+RM +PD VTYN ++
Sbjct: 142 KAVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMI 200
Query: 194 RTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCI 253
+LC GKL+LA++VL++ L C P VITYTILIEAT E GV +A+KL+DEM ++G
Sbjct: 201 GSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLK 260
Query: 254 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERL 313
PD+ TYN ++ G+CKEG +D A + + ++ GC+P+VI++NI+LR++ + G+W + E+L
Sbjct: 261 PDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKL 320
Query: 314 LAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCK 373
+ +M + C P+VVT++ILI LCR G + A+++L+ M + G TP++ SY+P++ FC+
Sbjct: 321 MTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCR 380
Query: 374 EKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLIT 433
E ++D AIE+LE M+S GC PDIV YNT+L LCK+GK D A+EI +L CSP +
Sbjct: 381 EGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS 440
Query: 434 YNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLE 493
YNT+ L G +A+ ++ EM + G+ PD ITY+S++ L REG VDEA +L D+
Sbjct: 441 YNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR 500
Query: 494 RLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAK 553
P+V+TYN ++LG CKA + AI++L MV C+P E TYT+LIEGI + G
Sbjct: 501 SCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRA 560
Query: 554 EALDLLNQLCSRGVVKKSSAEQV 576
EA++L N L + + S +++
Sbjct: 561 EAMELANDLVRIDAISEYSFKRL 583
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Query: 70 HISSGMENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGF 129
H+ M ++ ++ ++ N+ + L R G ++E F+ L M P ++ ++ GF
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518
Query: 130 CKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERMSVAPDVVTY 189
CK + A V+E + +G P+ TY VLI G I A E M +A D+V
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG------IGFAGYRAEAMELANDLVRI 572
Query: 190 NTI 192
+ I
Sbjct: 573 DAI 575
>sp|A3KPF8|PP131_ARATH Pentatricopeptide repeat-containing protein At1g79080,
chloroplastic OS=Arabidopsis thaliana GN=At1g79080 PE=2
SV=1
Length = 576
Score = 338 bits (866), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 185/487 (37%), Positives = 290/487 (59%), Gaps = 6/487 (1%)
Query: 100 LEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNV 159
L + F LES+V G P++ T L+ CK + +KA RV+E++ SG +PD Y
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 160 LISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKE 216
L++ C+ G + A+Q++E+M + VTYN ++R LC G LN +++ + + ++K
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 217 CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAI 276
P+ TY+ L+EA KE G +A+KLLDE+ KG P++V+YNVL+ G CKEGR D+A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 277 KFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFL 336
++P+ G + NV+++NI+LR +C GRW +A LLAEM +PSVVT+NILIN L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326
Query: 337 CRKGLLGRAIDILEKMPK--HGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYP 394
G +A+ +L++M K H + SYNPV+ CKE K+D ++ L+ M+ R C P
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 386
Query: 395 DIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLL 454
+ TYN + + + KV A I+ LSNK Y +VI L + G T A +LL
Sbjct: 387 NEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 446
Query: 455 EEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERL-GVRPNVITYNSIMLGLCK 513
EM G PD TYS+L+ GL EG A+++ +E +P V +N+++LGLCK
Sbjct: 447 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506
Query: 514 ARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSSA 573
R+T A+++ MV + P E TY IL+EGIA+E + A ++L++L R V+ +++
Sbjct: 507 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 566
Query: 574 EQVAVKM 580
+++ ++
Sbjct: 567 DRIVMQF 573
Score = 165 bits (418), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 178/349 (51%), Gaps = 2/349 (0%)
Query: 219 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKF 278
PD+ + + + E + + L+ + G P+V L+ +CK RL +AI+
Sbjct: 69 PDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRV 128
Query: 279 LNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCR 338
+ M S G P+ + ++ +C G A +L+ +M G + VT+N L+ LC
Sbjct: 129 IELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCM 188
Query: 339 KGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVT 398
G L +++ +E++ + G PN+ +Y+ +L KE+ D A++ L+ ++ +G P++V+
Sbjct: 189 LGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVS 248
Query: 399 YNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMR 458
YN LLT CK+G+ D A+ + +L K +++YN ++ L G+ E+A LL EM
Sbjct: 249 YNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMD 308
Query: 459 TKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLG--VRPNVITYNSIMLGLCKARQ 516
P +TY+ L+ L+ G+ ++A+++ ++ + R +YN ++ LCK +
Sbjct: 309 GGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGK 368
Query: 517 TYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSR 565
+ L +M+ R CKP E TY + + +EA ++ L ++
Sbjct: 369 VDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNK 417
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 102/193 (52%)
Query: 374 EKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLIT 433
E + + +LE +V+ G P++ LL LCK ++ A+ ++ + + P
Sbjct: 84 EPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASA 143
Query: 434 YNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLE 493
Y +++ L K G AM+L+E+M G +T+TY++LV GL G ++++++ L
Sbjct: 144 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLM 203
Query: 494 RLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAK 553
+ G+ PN TY+ ++ K R T A+ +L +++ + +P +Y +L+ G EG
Sbjct: 204 QKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTD 263
Query: 554 EALDLLNQLCSRG 566
+A+ L +L ++G
Sbjct: 264 DAMALFRELPAKG 276
Score = 41.2 bits (95), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 53/125 (42%), Gaps = 28/125 (22%)
Query: 466 TITYSSL-----VGGLSREGKVDEA--IKLFHDLERL---GVRPNVITYNSIMLGLCKAR 515
TIT SS G S + + DE F LE L G +PNV ++ LCKA
Sbjct: 61 TITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKAN 120
Query: 516 QTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSSAEQ 575
+ +AI ++ MV+ P + YT L+ NQLC RG V A Q
Sbjct: 121 RLKKAIRVIELMVSSGIIPDASAYTYLV----------------NQLCKRGNV--GYAMQ 162
Query: 576 VAVKM 580
+ KM
Sbjct: 163 LVEKM 167
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 304 bits (779), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/490 (32%), Positives = 279/490 (56%), Gaps = 9/490 (1%)
Query: 95 VRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATR-VMEIVEDSGAVPD 153
+ G+L+ + E MV G + ++ GFCK G+ A + E+ G PD
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 154 VITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLH 210
T+N L++G C+ G + +A+++++ M PDV TYN+++ LC G++ A+EVL
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 211 KQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEG 270
+ + ++C P+ +TY LI CKE+ V +A +L + +KG +PDV T+N L+ G+C
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 271 RLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFN 330
A++ +M S GC+P+ T+N+++ S+CS G+ +A +L +M L GC+ SV+T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 331 ILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSR 390
LI+ C+ A +I ++M HG + NS++YN ++ G CK ++++ A + ++ M+
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 391 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQA 450
G PD TYN+LLT C+ G + A +I+ +++ C P ++TY T+I GL K G+ E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 451 MKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHD-LERLGVRPNVITYNSIML 509
KLL ++ KG+ Y+ ++ GL R+ K EAI LF + LE+ P+ ++Y +
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654
Query: 510 GLCKARQTYR-AIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVV 568
GLC R A+D L +++ + P ++ +L EG+ + + + L+N + +
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKA-- 712
Query: 569 KKSSAEQVAV 578
+ S E+V++
Sbjct: 713 -RFSEEEVSM 721
Score = 252 bits (644), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 149/486 (30%), Positives = 264/486 (54%), Gaps = 15/486 (3%)
Query: 91 LRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVME-IVEDSG 149
L RL R+G ++ K LE M LI + + + V++ ++++ G
Sbjct: 90 LLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFG 149
Query: 150 AVPDVITYN----VLISG-YCRLGEIDNALQVLERMSV---APDVVTYNTILRTLCDSGK 201
PD YN +L+ G +L EI +A +MSV PDV T+N +++ LC + +
Sbjct: 150 LKPDTHFYNRMLNLLVDGNSLKLVEISHA-----KMSVWGIKPDVSTFNVLIKALCRAHQ 204
Query: 202 LNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNV 261
L A+ +L PD T+T +++ +E + A+++ ++M GC V+ NV
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264
Query: 262 LVNGICKEGRLDEAIKFLNDMPSY-GCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLK 320
+V+G CKEGR+++A+ F+ +M + G P+ T N ++ +C G A ++ M+ +
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 321 GCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRA 380
G P V T+N +I+ LC+ G + A+++L++M C+PN+++YN ++ CKE +++ A
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 381 IEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDG 440
E ++ S+G PD+ T+N+L+ LC VA+E+ ++ +K C P TYN +ID
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Query: 441 LSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPN 500
L GK ++A+ +L++M G ITY++L+ G + K EA ++F ++E GV N
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504
Query: 501 VITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLN 560
+TYN+++ GLCK+R+ A ++ M+ KP + TY L+ G K+A D++
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564
Query: 561 QLCSRG 566
+ S G
Sbjct: 565 AMTSNG 570
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 214/408 (52%), Gaps = 6/408 (1%)
Query: 75 MENSSLNFED-FESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVG 133
M N F D + N + L + G ++ + ++ M+ G PD+ S+I G CK+G
Sbjct: 285 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344
Query: 134 KTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQ---VLERMSVAPDVVTYN 190
+ ++A V++ + P+ +TYN LIS C+ +++ A + VL + PDV T+N
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 191 TILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNK 250
++++ LC + +AME+ + K C PD TY +LI++ C + + +A+ +L +M
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 251 GCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDA 310
GC V+TYN L++G CK + EA + ++M +G N +T+N ++ +C + R DA
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 311 ERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHG 370
+L+ +M+++G P T+N L+ CR G + +A DI++ M +GC P+ ++Y ++ G
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 371 FCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ-LSNKHCSP 429
CK +++ A + L + +G YN ++ L + K A+ + + L P
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP 644
Query: 430 VLITYNTVIDGL-SKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGL 476
++Y V GL + G +A+ L E+ KG P+ + L GL
Sbjct: 645 DAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
Score = 198 bits (504), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 115/368 (31%), Positives = 203/368 (55%), Gaps = 41/368 (11%)
Query: 242 KLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDM-PSYGCQPNVITHNIILRS 300
K+L++M++ C T+ +L+ + DE + ++ M +G +P+ +N +L
Sbjct: 104 KILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNL 163
Query: 301 MCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKH----- 355
+ E A+M + G P V TFN+LI LCR L AI +LE MP +
Sbjct: 164 LVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPD 223
Query: 356 ------------------------------GCTPNSLSYNPVLHGFCKEKKMDRAIEYLE 385
GC+ +++S N ++HGFCKE +++ A+ +++
Sbjct: 224 EKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQ 283
Query: 386 IMVSR-GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKV 444
M ++ G +PD T+NTL+ LCK G V A+EI++ + + P + TYN+VI GL K+
Sbjct: 284 EMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 343
Query: 445 GKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITY 504
G+ ++A+++L++M T+ P+T+TY++L+ L +E +V+EA +L L G+ P+V T+
Sbjct: 344 GEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 403
Query: 505 NSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQL-- 562
NS++ GLC R A+++ +M ++ C+P E TY +LI+ + +G EAL++L Q+
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 563 --CSRGVV 568
C+R V+
Sbjct: 464 SGCARSVI 471
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 184/372 (49%), Gaps = 7/372 (1%)
Query: 88 NNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
N + L + ++EE + + G +PD+ SLI+G C R A + E +
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLERMSV---APDVVTYNTILRTLCDSGKLNL 204
G PD TYN+LI C G++D AL +L++M + A V+TYNT++ C + K
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTRE 488
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
A E+ + + +TY LI+ CK V A +L+D+M +G PD TYN L+
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
Query: 265 GICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSP 324
C+ G + +A + M S GC+P+++T+ ++ +C GR A +LL + +KG +
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
Query: 325 SVVTFNILINFLCRKGLLGRAIDILEKM-PKHGCTPNSLSYNPVLHGFCKEKKMDR-AIE 382
+ +N +I L RK AI++ +M ++ P+++SY V G C R A++
Sbjct: 609 TPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVD 668
Query: 383 YLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLS 442
+L ++ +G P+ + L L + V+++N + K + +++ GL
Sbjct: 669 FLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQK--ARFSEEEVSMVKGLL 726
Query: 443 KVGKTEQAMKLL 454
K+ K + A+ L
Sbjct: 727 KIRKFQDALATL 738
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 131/318 (41%), Gaps = 72/318 (22%)
Query: 323 SPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIE 382
SP + ++ L R G ILE M C + ++ ++ + + + D +
Sbjct: 80 SPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILS 139
Query: 383 YLEIMVSR------------------------------------GCYPDIVTYNTLLTAL 406
++ M+ G PD+ T+N L+ AL
Sbjct: 140 VVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 199
Query: 407 CK-----------------------------------DGKVDVAVEILNQLSNKHCSPVL 431
C+ +G +D A+ I Q+ CS
Sbjct: 200 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 259
Query: 432 ITYNTVIDGLSKVGKTEQAMKLLEEMRTK-GLKPDTITYSSLVGGLSREGKVDEAIKLFH 490
++ N ++ G K G+ E A+ ++EM + G PD T+++LV GL + G V AI++
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 491 DLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEG 550
+ + G P+V TYNS++ GLCK + A+++L M+TR C P TY LI + E
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 551 LAKEALDLLNQLCSRGVV 568
+EA +L L S+G++
Sbjct: 380 QVEEATELARVLTSKGIL 397
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 39/203 (19%)
Query: 402 LLTALCKDGKVDVAVEILNQLSNK-HCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTK 460
LL +L A+ + N S K + SP Y ++ L + G + K+LE+M++
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112
Query: 461 ------------------------------------GLKPDTITYSSLVGGLSREGKVDE 484
GLKPDT Y+ ++ L +G +
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRML-NLLVDGNSLK 171
Query: 485 AIKLFH-DLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILI 543
+++ H + G++P+V T+N ++ LC+A Q AI +L DM + P E T+T ++
Sbjct: 172 LVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM 231
Query: 544 EGIAYEGLAKEALDLLNQLCSRG 566
+G EG AL + Q+ G
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFG 254
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 298 bits (764), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 247/416 (59%), Gaps = 4/416 (0%)
Query: 157 YNVLISGYCRLGEIDNALQVL---ERMSVAPDVVTYNTILRTLCDSGK-LNLAMEVLHKQ 212
+++++ Y RL ID AL ++ + P V++YN +L S + ++ A V +
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 213 LEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRL 272
LE + P+V TY ILI C + A+ L D+M KGC+P+VVTYN L++G CK ++
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 273 DEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNIL 332
D+ K L M G +PN+I++N+++ +C GR + +L EM +G S VT+N L
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 333 INFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGC 392
I C++G +A+ + +M +HG TP+ ++Y ++H CK M+RA+E+L+ M RG
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 393 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMK 452
P+ TY TL+ + G ++ A +L ++++ SP ++TYN +I+G GK E A+
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 453 LLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLC 512
+LE+M+ KGL PD ++YS+++ G R VDEA+++ ++ G++P+ ITY+S++ G C
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 513 KARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVV 568
+ R+T A D+ +M+ P E TYT LI EG ++AL L N++ +GV+
Sbjct: 497 EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Score = 280 bits (717), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/442 (31%), Positives = 250/442 (56%), Gaps = 4/442 (0%)
Query: 125 LIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCR----LGEIDNALQVLERM 180
+++ + ++ KA ++ + + G +P V++YN ++ R + +N + +
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 181 SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQA 240
V+P+V TYN ++R C +G +++A+ + K K C P+V+TY LI+ CK +
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 241 MKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRS 300
KLL M KG P++++YNV++NG+C+EGR+ E L +M G + +T+N +++
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 301 MCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPN 360
C G + A + AEM+ G +PSV+T+ LI+ +C+ G + RA++ L++M G PN
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379
Query: 361 SLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 420
+Y ++ GF ++ M+ A L M G P +VTYN L+ C GK++ A+ +L
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 421 QLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREG 480
+ K SP +++Y+TV+ G + ++A+++ EM KG+KPDTITYSSL+ G +
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499
Query: 481 KVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYT 540
+ EA L+ ++ R+G+ P+ TY +++ C +A+ + +MV + P TY+
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 541 ILIEGIAYEGLAKEALDLLNQL 562
+LI G+ + +EA LL +L
Sbjct: 560 VLINGLNKQSRTREAKRLLLKL 581
Score = 269 bits (688), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 150/472 (31%), Positives = 260/472 (55%), Gaps = 7/472 (1%)
Query: 113 HGDIPDIIPCTSLIRGFCKVGKTRK-ATRVMEIVEDSGAVPDVITYNVLISGYCRLGEID 171
HG +P ++ +++ + + A V + + +S P+V TYN+LI G+C G ID
Sbjct: 163 HGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNID 222
Query: 172 NALQVLERMSVA---PDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILI 228
AL + ++M P+VVTYNT++ C K++ ++L K P++I+Y ++I
Sbjct: 223 VALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVI 282
Query: 229 EATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQ 288
C+E + + +L EM +G D VTYN L+ G CKEG +A+ +M +G
Sbjct: 283 NGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT 342
Query: 289 PNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDI 348
P+VIT+ ++ SMC G A L +M ++G P+ T+ L++ +KG + A +
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 349 LEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCK 408
L +M +G +P+ ++YN +++G C KM+ AI LE M +G PD+V+Y+T+L+ C+
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 409 DGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTIT 468
VD A+ + ++ K P ITY+++I G + +T++A L EEM GL PD T
Sbjct: 463 SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 522
Query: 469 YSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMV 528
Y++L+ EG +++A++L +++ GV P+V+TY+ ++ GL K +T A +L +
Sbjct: 523 YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Query: 529 TRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSSAEQVAVKM 580
P++ TY LIE + K + L+ C +G++ + A+QV M
Sbjct: 583 YEESVPSDVTYHTLIENCSNIEF-KSVVSLIKGFCMKGMM--TEADQVFESM 631
Score = 255 bits (651), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 143/488 (29%), Positives = 258/488 (52%), Gaps = 18/488 (3%)
Query: 85 FESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEI 144
F N +R G ++ + M G +P+++ +LI G+CK+ K +++
Sbjct: 206 FTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRS 265
Query: 145 VEDSGAVPDVITYNVLISGYCRLG---EIDNALQVLERMSVAPDVVTYNTILRTLCDSGK 201
+ G P++I+YNV+I+G CR G E+ L + R + D VTYNT+++ C G
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGN 325
Query: 202 LNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNV 261
+ A+ + + L P VITYT LI + CK + +AM+ LD+MR +G P+ TY
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 262 LVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKG 321
LV+G ++G ++EA + L +M G P+V+T+N ++ C TG+ DA +L +M KG
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 322 CSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAI 381
SP VV+++ +++ CR + A+ + +M + G P++++Y+ ++ GFC++++ A
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 382 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGL 441
+ E M+ G PD TY L+ A C +G ++ A+++ N++ K P ++TY+ +I+GL
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 442 SKVGKTEQAMKLLEEMRTKGLKPDTITYS---------------SLVGGLSREGKVDEAI 486
+K +T +A +LL ++ + P +TY SL+ G +G + EA
Sbjct: 566 NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEAD 625
Query: 487 KLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGI 546
++F + +P+ YN ++ G C+A +A + +MV T L++ +
Sbjct: 626 QVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKAL 685
Query: 547 AYEGLAKE 554
EG E
Sbjct: 686 HKEGKVNE 693
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/489 (29%), Positives = 256/489 (52%), Gaps = 20/489 (4%)
Query: 99 ELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYN 158
++++GFK L SM G P++I +I G C+ G+ ++ + V+ + G D +TYN
Sbjct: 255 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 314
Query: 159 VLISGYCRLGEIDNALQV---LERMSVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEK 215
LI GYC+ G AL + + R + P V+TY +++ ++C +G +N AME L + +
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 216 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEA 275
P+ TYT L++ ++ + +A ++L EM + G P VVTYN L+NG C G++++A
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 276 IKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINF 335
I L DM G P+V++++ +L C + +A R+ EMV KG P +T++ LI
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494
Query: 336 LCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPD 395
C + A D+ E+M + G P+ +Y +++ +C E +++A++ MV +G PD
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554
Query: 396 IVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKV----------- 444
+VTY+ L+ L K + A +L +L + P +TY+T+I+ S +
Sbjct: 555 VVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKG 614
Query: 445 ----GKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPN 500
G +A ++ E M K KPD Y+ ++ G R G + +A L+ ++ + G +
Sbjct: 615 FCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLH 674
Query: 501 VITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYT-ILIEGIAYEGLAKEALDLL 559
+T +++ L K + ++ V RSC+ +EA +L+E EG LD+L
Sbjct: 675 TVTVIALVKALHKEGKVNELNSVIVH-VLRSCELSEAEQAKVLVEINHREGNMDVVLDVL 733
Query: 560 NQLCSRGVV 568
++ G +
Sbjct: 734 AEMAKDGFL 742
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 125/402 (31%), Positives = 208/402 (51%), Gaps = 30/402 (7%)
Query: 91 LRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGA 150
+ + + G + +FL+ M G P+ T+L+ GF + G +A RV+ + D+G
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411
Query: 151 VPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAME 207
P V+TYN LI+G+C G++++A+ VLE M ++PDVV+Y+T+L C S ++ A+
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 471
Query: 208 VLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGIC 267
V + +EK PD ITY+ LI+ C++ +A L +EM G PD TY L+N C
Sbjct: 472 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 531
Query: 268 KEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVV 327
EG L++A++ N+M G P+V+T+++++ + R +A+RLL ++ + PS V
Sbjct: 532 MEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDV 591
Query: 328 TFNILINF---------------LCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFC 372
T++ LI C KG++ A + E M P+ +YN ++HG C
Sbjct: 592 TYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHC 651
Query: 373 KEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVD----VAVEILN--QLSNKH 426
+ + +A + MV G VT L+ AL K+GKV+ V V +L +LS
Sbjct: 652 RAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAE 711
Query: 427 CSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTIT 468
+ VL+ N + G + + +L EM G P+ I+
Sbjct: 712 QAKVLVEIN------HREGNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 176 bits (445), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 183/352 (51%), Gaps = 36/352 (10%)
Query: 252 CIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMD-A 310
C ++++V + +D+A+ ++ ++G P V+++N +L + + R + A
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189
Query: 311 ERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHG 370
E + EM+ SP+V T+NILI C G + A+ + +KM GC PN ++YN ++ G
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249
Query: 371 FCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNK----- 425
+CK +K+D + L M +G P++++YN ++ LC++G++ +L +++ +
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLD 309
Query: 426 ----------HC--------------------SPVLITYNTVIDGLSKVGKTEQAMKLLE 455
+C +P +ITY ++I + K G +AM+ L+
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 456 EMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKAR 515
+MR +GL P+ TY++LV G S++G ++EA ++ ++ G P+V+TYN+++ G C
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 516 QTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
+ AI +L DM + P +Y+ ++ G EAL + ++ +G+
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 154/328 (46%), Gaps = 31/328 (9%)
Query: 66 LNNGHISSG-MENSSLNFEDFES----------NNHLRRLVRNGELEEGFKFLESMVYHG 114
L NGH +G ME++ ED + + L R+ +++E + MV G
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 115 DIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNAL 174
PD I +SLI+GFC+ +T++A + E + G PD TY LI+ YC G+++ AL
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540
Query: 175 QVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIE-- 229
Q+ M V PDVVTY+ ++ L + A +L K +E P +TY LIE
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600
Query: 230 -------------ATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAI 276
C + + +A ++ + M K PD YN++++G C+ G + +A
Sbjct: 601 SNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAY 660
Query: 277 KFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPS-VVTFNILINF 335
+M G + +T +++++ G+ + ++ VL+ C S +L+
Sbjct: 661 TLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVH-VLRSCELSEAEQAKVLVEI 719
Query: 336 LCRKGLLGRAIDILEKMPKHGCTPNSLS 363
R+G + +D+L +M K G PN +S
Sbjct: 720 NHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 297 bits (761), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 154/519 (29%), Positives = 276/519 (53%), Gaps = 38/519 (7%)
Query: 99 ELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYN 158
+L++ MV P I+ + L+ K+ K + E +++ G ++ TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 159 VLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEK 215
+LI+ +CR ++ AL VL +M PD+VT N++L C +++ A+ ++ + +E
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 216 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLD-- 273
PD T+ LI + + +A+ L+D M KGC PD+VTY ++VNG+CK G +D
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 274 ---------------------------------EAIKFLNDMPSYGCQPNVITHNIILRS 300
+A+ +M + G +PNV+T+N ++R
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 301 MCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPN 360
+C+ GRW DA RLL++M+ + +P+VVTF+ LI+ ++G L A + ++M K P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 361 SLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 420
+Y+ +++GFC ++D A E+M+S+ C+P++VTYNTL+ CK +VD +E+
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 421 QLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREG 480
++S + +TY T+I G + + + A + ++M + G+ PD +TYS L+ GL G
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 481 KVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYT 540
KV+ A+ +F L+R + P++ TYN ++ G+CKA + D+ + + KP TYT
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 541 ILIEGIAYEGLAKEALDLLNQLCSRGVVKKSSAEQVAVK 579
++ G +GL +EA L ++ G + S ++
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 82/158 (51%)
Query: 409 DGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTIT 468
D K+D AV + + P ++ ++ ++ ++K+ K + + L E+M+ G+ + T
Sbjct: 59 DLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118
Query: 469 YSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMV 528
YS L+ R ++ A+ + + +LG P+++T NS++ G C + A+ ++ MV
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 529 TRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRG 566
+P T+ LI G+ A EA+ L++++ +G
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 296 bits (758), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 142/458 (31%), Positives = 263/458 (57%), Gaps = 3/458 (0%)
Query: 125 LIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERMSVA- 183
LI FC+ + A V+ + G P+++T + L++GYC I A+ ++++M V
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 184 --PDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAM 241
P+ VT+NT++ L K + AM ++ + + K C PD++TY +++ CK A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 242 KLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSM 301
LL++M P V+ YN +++G+CK +D+A+ +M + G +PNV+T++ ++ +
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 302 CSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNS 361
C+ GRW DA RLL++M+ + +P V TF+ LI+ ++G L A + ++M K P+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 362 LSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 421
++Y+ +++GFC ++D A + E MVS+ C+PD+VTYNTL+ CK +V+ +E+ +
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 422 LSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGK 481
+S + +TYN +I GL + G + A ++ +EM + G+ P+ +TY++L+ GL + GK
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 482 VDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTI 541
+++A+ +F L+R + P + TYN ++ G+CKA + D+ ++ + KP Y
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 542 LIEGIAYEGLAKEALDLLNQLCSRGVVKKSSAEQVAVK 579
+I G +G +EA L ++ G + S ++
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579
Score = 249 bits (636), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 138/441 (31%), Positives = 232/441 (52%), Gaps = 3/441 (0%)
Query: 88 NNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
N + L + + E ++ MV G PD++ ++ G CK G T A ++ +E
Sbjct: 190 NTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ 249
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNL 204
P V+ YN +I G C+ +D+AL + + M + P+VVTY++++ LC+ G+ +
Sbjct: 250 GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 309
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
A +L +E++ PDV T++ LI+A KE + +A KL DEM + P +VTY+ L+N
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369
Query: 265 GICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSP 324
G C RLDEA + M S C P+V+T+N +++ C R + + EM +G
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429
Query: 325 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYL 384
+ VT+NILI L + G A +I ++M G PN ++YN +L G CK K+++A+
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 385 EIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKV 444
E + P I TYN ++ +CK GKV+ ++ LS K P ++ YNT+I G +
Sbjct: 490 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 549
Query: 445 GKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITY 504
G E+A L +EM+ G P++ Y++L+ R+G + + +L ++ G + T
Sbjct: 550 GSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 609
Query: 505 NSIMLGLCKARQTYRAIDILA 525
+ L R +D+L+
Sbjct: 610 GLVTNMLHDGRLDKSFLDMLS 630
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 202/379 (53%)
Query: 201 KLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYN 260
KL+ A+ + + ++ +P +I ++ L+ A K + + L ++M+N G + TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 261 VLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLK 320
+L+N C+ +L A+ L M G +PN++T + +L C + R +A L+ +M +
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 321 GCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRA 380
G P+ VTFN LI+ L A+ ++++M GC P+ ++Y V++G CK D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 381 IEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDG 440
L M P ++ YNT++ LCK +D A+ + ++ K P ++TY+++I
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 441 LSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPN 500
L G+ A +LL +M + + PD T+S+L+ +EGK+ EA KL+ ++ + + P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 501 VITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLN 560
++TY+S++ G C + A + MV++ C P TY LI+G +E +++
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 561 QLCSRGVVKKSSAEQVAVK 579
++ RG+V + + ++
Sbjct: 421 EMSQRGLVGNTVTYNILIQ 439
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 169/304 (55%), Gaps = 1/304 (0%)
Query: 264 NGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCS 323
NG+ E +LD+A+ +M P++I + +L ++ ++ L +M G
Sbjct: 55 NGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 324 PSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEY 383
+ T++ILIN CR+ L A+ +L KM K G PN ++ + +L+G+C K++ A+
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 384 LEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSK 443
++ M G P+ VT+NTL+ L K A+ +++++ K C P L+TY V++GL K
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 444 VGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVIT 503
G T+ A LL +M L+P + Y++++ GL + +D+A+ LF ++E G+RPNV+T
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 504 YNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLC 563
Y+S++ LC + A +L+DM+ R P T++ LI+ EG EA L +++
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 564 SRGV 567
R +
Sbjct: 354 KRSI 357
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 147/287 (51%), Gaps = 3/287 (1%)
Query: 73 SGMENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKV 132
S M +N + F + + V+ G+L E K + MV P I+ +SLI GFC
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 133 GKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERMS---VAPDVVTY 189
+ +A ++ E + PDV+TYN LI G+C+ ++ ++V MS + + VTY
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Query: 190 NTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRN 249
N +++ L +G ++A E+ + + P+++TY L++ CK + +AM + + ++
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 250 KGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMD 309
P + TYN+++ G+CK G++++ ++ G +P+V+ +N ++ C G +
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Query: 310 AERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHG 356
A+ L EM G P+ +N LI R G + +++++M G
Sbjct: 555 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 296 bits (757), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 145/465 (31%), Positives = 265/465 (56%), Gaps = 3/465 (0%)
Query: 118 DIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVL 177
D+ LI FC+ + A V+ + G PD++T + L++GYC I A+ ++
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 178 ERMSV---APDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKE 234
++M V P+ VT+NT++ L K + A+ ++ + + + C PD+ TY ++ CK
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 235 SGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITH 294
+ A+ LL +M DVV Y +++ +C +++A+ +M + G +PNV+T+
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 295 NIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPK 354
N ++R +C+ GRW DA RLL++M+ + +P+VVTF+ LI+ ++G L A + ++M K
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 355 HGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDV 414
P+ +Y+ +++GFC ++D A E+M+S+ C+P++VTYNTL+ CK +V+
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 415 AVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVG 474
+E+ ++S + +TYNT+I GL + G + A K+ ++M + G+ PD ITYS L+
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 475 GLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKP 534
GL + GK+++A+ +F L++ + P++ TYN ++ G+CKA + D+ + + KP
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 535 TEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSSAEQVAVK 579
YT +I G +GL +EA L ++ G + S ++
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578
Score = 290 bits (741), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 158/509 (31%), Positives = 269/509 (52%), Gaps = 3/509 (0%)
Query: 75 MENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGK 134
M+N ++++ + N + R +L L M+ G PDI+ +SL+ G+C +
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 165
Query: 135 TRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNT 191
+A +++ + P+ +T+N LI G + A+ +++RM PD+ TY T
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 192 ILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKG 251
++ LC G ++LA+ +L K + + DV+ YT +I+A C V A+ L EM NKG
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 252 CIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAE 311
P+VVTYN L+ +C GR +A + L+DM PNV+T + ++ + G+ ++AE
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 312 RLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGF 371
+L EM+ + P + T++ LIN C L A + E M C PN ++YN ++ GF
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 372 CKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVL 431
CK K+++ +E M RG + VTYNTL+ L + G D+A +I ++ + P +
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 432 ITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHD 491
ITY+ ++DGL K GK E+A+ + E ++ ++PD TY+ ++ G+ + GKV++ LF
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 492 LERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGL 551
L GV+PNVI Y +++ G C+ A + +M P TY LI +G
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Query: 552 AKEALDLLNQLCSRGVVKKSSAEQVAVKM 580
+ +L+ ++ S G V +S + + M
Sbjct: 586 KAASAELIKEMRSCGFVGDASTISMVINM 614
Score = 219 bits (557), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 211/402 (52%), Gaps = 3/402 (0%)
Query: 169 EIDNALQVLERMSVA---PDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYT 225
++D+A+ + M + P +V +N +L + K +L + + + D+ +Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 226 ILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSY 285
ILI C+ S + A+ +L +M G PD+VT + L+NG C R+ EA+ ++ M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 286 GCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRA 345
QPN +T N ++ + + +A L+ MV +GC P + T+ ++N LC++G + A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 346 IDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTA 405
+ +L+KM K + + Y ++ C K ++ A+ M ++G P++VTYN+L+
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 406 LCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPD 465
LC G+ A +L+ + + +P ++T++ +ID K GK +A KL +EM + + PD
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 466 TITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILA 525
TYSSL+ G ++DEA +F + PNV+TYN+++ G CKA++ +++
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 526 DMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
+M R TY LI+G+ G A + ++ S GV
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Score = 198 bits (504), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 196/368 (53%)
Query: 201 KLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYN 260
KL+ A+++ + ++ P ++ + L+ A K + + L + M+N D+ +YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 261 VLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLK 320
+L+N C+ +L A+ L M G +P+++T + +L C R +A L+ +M +
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 321 GCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRA 380
P+ VTFN LI+ L A+ ++++M GC P+ +Y V++G CK +D A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 381 IEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDG 440
+ L+ M D+V Y T++ ALC V+ A+ + ++ NK P ++TYN++I
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 441 LSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPN 500
L G+ A +LL +M + + P+ +T+S+L+ +EGK+ EA KL+ ++ + + P+
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 501 VITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLN 560
+ TY+S++ G C + A + M+++ C P TY LI+G +E ++L
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 561 QLCSRGVV 568
++ RG+V
Sbjct: 420 EMSQRGLV 427
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 91/180 (50%), Gaps = 3/180 (1%)
Query: 390 RGCYPDIVTYN---TLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGK 446
RG Y +Y+ L + D K+D AV++ ++ P ++ +N ++ ++K+ K
Sbjct: 36 RGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNK 95
Query: 447 TEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNS 506
+ + L E M+ + D +Y+ L+ R ++ A+ + + +LG P+++T +S
Sbjct: 96 FDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSS 155
Query: 507 IMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRG 566
++ G C ++ A+ ++ M +P T+ LI G+ A EA+ L++++ +RG
Sbjct: 156 LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215
>sp|Q9FRS4|PPR22_ARATH Pentatricopeptide repeat-containing protein At1g08610
OS=Arabidopsis thaliana GN=At1g08610 PE=2 SV=1
Length = 559
Score = 292 bits (748), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 164/477 (34%), Positives = 262/477 (54%), Gaps = 39/477 (8%)
Query: 84 DFESNNH-LRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVM 142
D E+NN L L NG+L + K +E M H +P C++L+RG ++ + KA ++
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 143 EIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERMSVA---PDVVTYNTILRTLCDS 199
++ SG VPD ITYN++I C+ G I AL +LE MS++ PDV+TYNT++R + D
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 200 GKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTY 259
G A+ QL+ C P +ITYT+L+E C+ G +A+++L++M +GC PD+VTY
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 260 NVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVL 319
N LVN C+ G L+E + + S+G + N +T+N +L S+CS W + E +L M
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 320 KGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDR 379
P+V+T+NILIN LC+ LL RAID +M + C P+ ++YN VL KE +D
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDD 402
Query: 380 AIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVID 439
AIE L ++ + C P ++TYN+++ L K G + A+E+ +Q+ + P IT ++I
Sbjct: 403 AIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIY 462
Query: 440 GLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRP 499
G + E+A ++L+E +G TY ++ GL ++ +++ AI++
Sbjct: 463 GFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVV---------- 512
Query: 500 NVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEAL 556
IML T CKP E YT +++G+ G+ EA+
Sbjct: 513 ------EIML-------------------TGGCKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 219 bits (557), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 209/395 (52%)
Query: 185 DVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLL 244
D T N IL LC +GKL A +++ P + + L+ + + +AM +L
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 245 DEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCST 304
M G +PD +TYN+++ +CK+G + A+ L DM G P+VIT+N ++R M
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 305 GRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSY 364
G A R + + GC P ++T+ +L+ +CR RAI++LE M GC P+ ++Y
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 365 NPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSN 424
N +++ C+ ++ ++ ++S G + VTYNTLL +LC D EILN +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 425 KHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDE 484
P +ITYN +I+GL K +A+ +M + PD +TY++++G +S+EG VD+
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDD 402
Query: 485 AIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIE 544
AI+L L+ P +ITYNS++ GL K +A+++ M+ P + T LI
Sbjct: 403 AIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIY 462
Query: 545 GIAYEGLAKEALDLLNQLCSRGVVKKSSAEQVAVK 579
G L +EA +L + +RG + S ++ ++
Sbjct: 463 GFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQ 497
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 291 bits (745), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 154/481 (32%), Positives = 264/481 (54%), Gaps = 3/481 (0%)
Query: 103 GFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLIS 162
F + ++ G P+ I ++LI G C G+ +A +++ + + G PD+IT N L++
Sbjct: 142 AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVN 201
Query: 163 GYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYP 219
G C G+ A+ ++++M P+ VTY +L +C SG+ LAME+L K E+
Sbjct: 202 GLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 220 DVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFL 279
D + Y+I+I+ CK + A L +EM KG +++TYN+L+ G C GR D+ K L
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 280 NDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRK 339
DM PNV+T ++++ S G+ +AE L EM+ +G +P +T+ LI+ C++
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Query: 340 GLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTY 399
L +A +++ M GC PN ++N +++G+CK ++D +E M RG D VTY
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 400 NTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRT 459
NTL+ C+ GK++VA E+ ++ ++ P ++TY ++DGL G++E+A+++ E++
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 460 KGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYR 519
++ D Y+ ++ G+ KVD+A LF L GV+P V TYN ++ GLCK
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561
Query: 520 AIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSSAEQVAVK 579
A + M P TY ILI +G A +++ L+ +L G +S ++ +
Sbjct: 562 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
Query: 580 M 580
M
Sbjct: 622 M 622
Score = 291 bits (745), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 146/434 (33%), Positives = 254/434 (58%), Gaps = 3/434 (0%)
Query: 125 LIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---S 181
+I FC+ K A M + G P+ IT++ LI+G C G + AL++++RM
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 182 VAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAM 241
PD++T NT++ LC SGK AM ++ K +E C P+ +TY ++ CK AM
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 242 KLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSM 301
+LL +M + D V Y+++++G+CK G LD A N+M G N+IT+NI++
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 302 CSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNS 361
C+ GRW D +LL +M+ + +P+VVTF++LI+ ++G L A ++ ++M G P++
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 362 LSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 421
++Y ++ GFCKE +D+A + +++MVS+GC P+I T+N L+ CK ++D +E+ +
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 422 LSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGK 481
+S + +TYNT+I G ++GK A +L +EM ++ + P+ +TY L+ GL G+
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 482 VDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTI 541
++A+++F +E+ + ++ YN I+ G+C A + A D+ + + KP TY I
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 542 LIEGIAYEGLAKEA 555
+I G+ +G EA
Sbjct: 549 MIGGLCKKGPLSEA 562
Score = 242 bits (617), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 241/432 (55%), Gaps = 6/432 (1%)
Query: 137 KATRVMEIVED---SGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYN 190
KA +++ D S +P VI ++ L S + + D L + ++M +A ++ T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 191 TILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNK 250
++ C KL LA + K ++ P+ IT++ LI C E V +A++L+D M
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 251 GCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDA 310
G PD++T N LVNG+C G+ EA+ ++ M YGCQPN +T+ +L MC +G+ A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 311 ERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHG 370
LL +M + V ++I+I+ LC+ G L A ++ +M G T N ++YN ++ G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 371 FCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPV 430
FC + D + L M+ R P++VT++ L+ + K+GK+ A E+ ++ ++ +P
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 431 LITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFH 490
ITY ++IDG K ++A ++++ M +KG P+ T++ L+ G + ++D+ ++LF
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 491 DLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEG 550
+ GV + +TYN+++ G C+ + A ++ +MV+R P TY IL++G+ G
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 551 LAKEALDLLNQL 562
+++AL++ ++
Sbjct: 488 ESEKALEIFEKI 499
Score = 209 bits (532), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 217/401 (54%), Gaps = 5/401 (1%)
Query: 171 DNALQVLERMSVA---PDVVTYNTILRTLCDSGKLNLAMEVLHKQLE-KECYPDVITYTI 226
D+A+ + M + P V+ ++ + + + + +L + L KQ+E K ++ T +I
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVL-ALCKQMELKGIAHNLYTLSI 128
Query: 227 LIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYG 286
+I C+ + A + ++ G P+ +T++ L+NG+C EGR+ EA++ ++ M G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 287 CQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAI 346
+P++IT N ++ +C +G+ +A L+ +MV GC P+ VT+ ++N +C+ G A+
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 347 DILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTAL 406
++L KM + +++ Y+ ++ G CK +D A M +G +I+TYN L+
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 407 CKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDT 466
C G+ D ++L + + +P ++T++ +ID K GK +A +L +EM +G+ PDT
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 467 ITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILAD 526
ITY+SL+ G +E +D+A ++ + G PN+ T+N ++ G CKA + +++
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 527 MVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
M R TY LI+G G A +L ++ SR V
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 198/382 (51%)
Query: 187 VTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDE 246
++Y LR+ K + A+++ + P VI ++ L A K + L +
Sbjct: 54 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113
Query: 247 MRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGR 306
M KG ++ T ++++N C+ +L A + + G +PN IT + ++ +C GR
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 307 WMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNP 366
+A L+ MV G P ++T N L+N LC G A+ +++KM ++GC PN+++Y P
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 367 VLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKH 426
VL+ CK + A+E L M R D V Y+ ++ LCK G +D A + N++ K
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 427 CSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAI 486
+ +ITYN +I G G+ + KLL +M + + P+ +T+S L+ +EGK+ EA
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 487 KLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGI 546
+L ++ G+ P+ ITY S++ G CK +A ++ MV++ C P T+ ILI G
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
Query: 547 AYEGLAKEALDLLNQLCSRGVV 568
+ L+L ++ RGVV
Sbjct: 414 CKANRIDDGLELFRKMSLRGVV 435
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 109/207 (52%)
Query: 361 SLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 420
+LSY L + K D AI+ M+ P ++ ++ L +A+ K + D+ + +
Sbjct: 53 NLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCK 112
Query: 421 QLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREG 480
Q+ K + L T + +I+ + K A + ++ G +P+TIT+S+L+ GL EG
Sbjct: 113 QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEG 172
Query: 481 KVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYT 540
+V EA++L + +G +P++IT N+++ GLC + + A+ ++ MV C+P TY
Sbjct: 173 RVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYG 232
Query: 541 ILIEGIAYEGLAKEALDLLNQLCSRGV 567
++ + G A++LL ++ R +
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNI 259
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 289 bits (740), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 157/530 (29%), Positives = 280/530 (52%), Gaps = 42/530 (7%)
Query: 92 RRLVRNG----ELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
R ++RNG +L++ MV +P I+ L+ K+ K + E ++
Sbjct: 54 REILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQR 113
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNL 204
V + TYN+LI+ +CR +I AL +L +M P +VT +++L C +++
Sbjct: 114 LEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 173
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
A+ ++ + +E PD IT+T LI + +A+ L+D M +GC P++VTY V+VN
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 265 GICKEGRLDEAIKFLN-----------------------------------DMPSYGCQP 289
G+CK G D A+ LN +M + G +P
Sbjct: 234 GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 293
Query: 290 NVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDIL 349
NV+T++ ++ +CS GRW DA +LL++M+ K +P++VTFN LI+ ++G A +
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 350 EKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKD 409
+ M K P+ +YN +++GFC ++D+A + E MVS+ C+PD+VTYNTL+ CK
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 410 GKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITY 469
+V+ E+ ++S++ +TY T+I GL G + A K+ ++M + G+ PD +TY
Sbjct: 414 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 473
Query: 470 SSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVT 529
S L+ GL GK+++A+++F +++ ++ ++ Y +++ G+CKA + D+ +
Sbjct: 474 SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 533
Query: 530 RSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSSAEQVAVK 579
+ KP TY +I G+ + L +EA LL ++ G + S ++
Sbjct: 534 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583
Score = 229 bits (583), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 125/402 (31%), Positives = 214/402 (53%), Gaps = 3/402 (0%)
Query: 94 LVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPD 153
L + + E ++ MV G P+++ ++ G CK G T A ++ +E + D
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 259
Query: 154 VITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLH 210
V+ +N +I C+ +D+AL + + M + P+VVTY++++ LC G+ + A ++L
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 211 KQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEG 270
+EK+ P+++T+ LI+A KE +A KL D+M + PD+ TYN LVNG C
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 271 RLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFN 330
RLD+A + M S C P+V+T+N +++ C + R D L EM +G VT+
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 331 ILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSR 390
LI L G A + ++M G P+ ++Y+ +L G C K+++A+E + M
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Query: 391 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQA 450
DI Y T++ +CK GKVD ++ LS K P ++TYNT+I GL ++A
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 559
Query: 451 MKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDL 492
LL++M+ G P++ TY++L+ R+G + +L ++
Sbjct: 560 YALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 197/380 (51%)
Query: 189 YNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMR 248
Y ILR KL+ A+ + ++ P ++ + L+ A K + L ++M+
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 249 NKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWM 308
+ + TYN+L+N C+ ++ A+ L M G +P+++T + +L C R
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 309 DAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVL 368
DA L+ +MV G P +TF LI+ L A+ ++++M + GC PN ++Y V+
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 369 HGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCS 428
+G CK D A+ L M + D+V +NT++ +LCK VD A+ + ++ K
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 429 PVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKL 488
P ++TY+++I L G+ A +LL +M K + P+ +T+++L+ +EGK EA KL
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 489 FHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAY 548
+ D+ + + P++ TYNS++ G C + +A + MV++ C P TY LI+G
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 549 EGLAKEALDLLNQLCSRGVV 568
++ +L ++ RG+V
Sbjct: 413 SKRVEDGTELFREMSHRGLV 432
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 177/351 (50%), Gaps = 3/351 (0%)
Query: 75 MENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGK 134
ME + + + N + L + +++ + M G P+++ +SLI C G+
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310
Query: 135 TRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNT 191
A++++ + + P+++T+N LI + + G+ A ++ + M S+ PD+ TYN+
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370
Query: 192 ILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKG 251
++ C +L+ A ++ + K+C+PDV+TY LI+ CK V +L EM ++G
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430
Query: 252 CIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAE 311
+ D VTY L+ G+ +G D A K M S G P+++T++I+L +C+ G+ A
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Query: 312 RLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGF 371
+ M + + +I +C+ G + D+ + G PN ++YN ++ G
Sbjct: 491 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
Query: 372 CKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL 422
C ++ + A L+ M G P+ TYNTL+ A +DG + E++ ++
Sbjct: 551 CSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 289 bits (740), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 155/468 (33%), Positives = 261/468 (55%), Gaps = 6/468 (1%)
Query: 91 LRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGA 150
+ L + + E + LE M G +PD +I G CK + +A +++ + G
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF 318
Query: 151 VPDVITYNVLISGYCRLGEIDNALQVLERMSVAPDVVTYNTILRTLCDSGKLNLAMEVLH 210
PD ITY L++G C++G +D A + R+ P++V +NT++ G+L+ A VL
Sbjct: 319 APDDITYGYLMNGLCKIGRVDAAKDLFYRIP-KPEIVIFNTLIHGFVTHGRLDDAKAVLS 377
Query: 211 KQLEKE-CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKE 269
+ PDV TY LI KE VG A+++L +MRNKGC P+V +Y +LV+G CK
Sbjct: 378 DMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKL 437
Query: 270 GRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTF 329
G++DEA LN+M + G +PN + N ++ + C R +A + EM KGC P V TF
Sbjct: 438 GKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTF 497
Query: 330 NILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVS 389
N LI+ LC + A+ +L M G N+++YN +++ F + ++ A + + MV
Sbjct: 498 NSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF 557
Query: 390 RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQ 449
+G D +TYN+L+ LC+ G+VD A + ++ +P I+ N +I+GL + G E+
Sbjct: 558 QGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEE 617
Query: 450 AMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIML 509
A++ +EM +G PD +T++SL+ GL R G++++ + +F L+ G+ P+ +T+N++M
Sbjct: 618 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Query: 510 GLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALD 557
LCK Y A +L + + P T++IL++ I + +E LD
Sbjct: 678 WLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI----IPQETLD 721
Score = 262 bits (670), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 141/485 (29%), Positives = 260/485 (53%), Gaps = 8/485 (1%)
Query: 99 ELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYN 158
E++ L M HG +P+ + +LI K + +A +++E + G VPD T+N
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291
Query: 159 VLISGYCRLGEIDNALQVLERMSV---APDVVTYNTILRTLCDSGKLNLAMEVLHKQLEK 215
+I G C+ I+ A +++ RM + APD +TY ++ LC G+++ A ++ ++ +
Sbjct: 292 DVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK- 350
Query: 216 ECYPDVITYTILIEATCKESGVGQAMKLLDEM-RNKGCIPDVVTYNVLVNGICKEGRLDE 274
P+++ + LI + A +L +M + G +PDV TYN L+ G KEG +
Sbjct: 351 ---PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGL 407
Query: 275 AIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILIN 334
A++ L+DM + GC+PNV ++ I++ C G+ +A +L EM G P+ V FN LI+
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 335 FLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYP 394
C++ + A++I +MP+ GC P+ ++N ++ G C+ ++ A+ L M+S G
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 395 DIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLL 454
+ VTYNTL+ A + G++ A +++N++ + ITYN++I GL + G+ ++A L
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 455 EEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKA 514
E+M G P I+ + L+ GL R G V+EA++ ++ G P+++T+NS++ GLC+A
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 515 RQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSSAE 574
+ + + + P T+ L+ + G +A LL++ G V
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707
Query: 575 QVAVK 579
+ ++
Sbjct: 708 SILLQ 712
Score = 257 bits (656), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/455 (31%), Positives = 247/455 (54%), Gaps = 8/455 (1%)
Query: 117 PDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQV 176
P + +++ FC V + A ++ + G VP+ + Y LI + ++ ALQ+
Sbjct: 215 PTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQL 274
Query: 177 LERMSV---APDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCK 233
LE M + PD T+N ++ LC ++N A +++++ L + PD ITY L+ CK
Sbjct: 275 LEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCK 334
Query: 234 ESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDM-PSYGCQPNVI 292
V A L + P++V +N L++G GRLD+A L+DM SYG P+V
Sbjct: 335 IGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVC 390
Query: 293 THNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKM 352
T+N ++ G A +L +M KGC P+V ++ IL++ C+ G + A ++L +M
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Query: 353 PKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKV 412
G PN++ +N ++ FCKE ++ A+E M +GC PD+ T+N+L++ LC+ ++
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 413 DVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSL 472
A+ +L + ++ +TYNT+I+ + G+ ++A KL+ EM +G D ITY+SL
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 473 VGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSC 532
+ GL R G+VD+A LF + R G P+ I+ N ++ GLC++ A++ +MV R
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Query: 533 KPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
P T+ LI G+ G ++ L + +L + G+
Sbjct: 631 TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Score = 250 bits (638), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 241/439 (54%), Gaps = 9/439 (2%)
Query: 133 GKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM----SVAPDVVT 188
G+ + R++ ++D G V + ++ Y + G +++ M S P +
Sbjct: 125 GEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKS 184
Query: 189 YNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMR 248
YN +L L +A V + L ++ P + T+ ++++A C + + A+ LL +M
Sbjct: 185 YNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMT 244
Query: 249 NKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWM 308
GC+P+ V Y L++ + K R++EA++ L +M GC P+ T N ++ +C R
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304
Query: 309 DAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVL 368
+A +++ M+++G +P +T+ L+N LC+ G + A D+ ++PK P + +N ++
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLI 360
Query: 369 HGFCKEKKMDRAIEYLEIMV-SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHC 427
HGF ++D A L MV S G PD+ TYN+L+ K+G V +A+E+L+ + NK C
Sbjct: 361 HGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC 420
Query: 428 SPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIK 487
P + +Y ++DG K+GK ++A +L EM GLKP+T+ ++ L+ +E ++ EA++
Sbjct: 421 KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE 480
Query: 488 LFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIA 547
+F ++ R G +P+V T+NS++ GLC+ + A+ +L DM++ TY LI
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 540
Query: 548 YEGLAKEALDLLNQLCSRG 566
G KEA L+N++ +G
Sbjct: 541 RRGEIKEARKLVNEMVFQG 559
Score = 250 bits (638), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/426 (31%), Positives = 233/426 (54%), Gaps = 9/426 (2%)
Query: 88 NNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
N+ + L + + E K + M+ G PD I L+ G CK+G+ A + +
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK 350
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLERM----SVAPDVVTYNTILRTLCDSGKLN 203
P+++ +N LI G+ G +D+A VL M + PDV TYN+++ G +
Sbjct: 351 ----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVG 406
Query: 204 LAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLV 263
LA+EVLH K C P+V +YTIL++ CK + +A +L+EM G P+ V +N L+
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 264 NGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCS 323
+ CKE R+ EA++ +MP GC+P+V T N ++ +C A LL +M+ +G
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Query: 324 PSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEY 383
+ VT+N LIN R+G + A ++ +M G + ++YN ++ G C+ ++D+A
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Query: 384 LEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSK 443
E M+ G P ++ N L+ LC+ G V+ AVE ++ + +P ++T+N++I+GL +
Sbjct: 587 FEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 646
Query: 444 VGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVIT 503
G+ E + + +++ +G+ PDT+T+++L+ L + G V +A L + G PN T
Sbjct: 647 AGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRT 706
Query: 504 YNSIML 509
+ SI+L
Sbjct: 707 W-SILL 711
Score = 195 bits (496), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 206/420 (49%), Gaps = 9/420 (2%)
Query: 157 YNVLISGYCRLGEIDNALQVLERMSVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKE 216
Y VLI GE ++L +M V + + + D K + LE
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 173
Query: 217 ----CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRL 272
C P +Y +++E + A + +M ++ P + T+ V++ C +
Sbjct: 174 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEI 233
Query: 273 DEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNIL 332
D A+ L DM +GC PN + + ++ S+ R +A +LL EM L GC P TFN +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293
Query: 333 INFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGC 392
I LC+ + A ++ +M G P+ ++Y +++G CK ++D A + + R
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD----LFYRIP 349
Query: 393 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKH-CSPVLITYNTVIDGLSKVGKTEQAM 451
P+IV +NTL+ G++D A +L+ + + P + TYN++I G K G A+
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 452 KLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGL 511
++L +MR KG KP+ +Y+ LV G + GK+DEA + +++ G++PN + +N ++
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 512 CKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKS 571
CK + A++I +M + CKP T+ LI G+ K AL LL + S GVV +
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 154/285 (54%), Gaps = 3/285 (1%)
Query: 98 GELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITY 157
G+++E + L M G P+ + LI FCK + +A + + G PDV T+
Sbjct: 438 GKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTF 497
Query: 158 NVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLE 214
N LISG C + EI +AL +L M V + VTYNT++ G++ A +++++ +
Sbjct: 498 NSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF 557
Query: 215 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDE 274
+ D ITY LI+ C+ V +A L ++M G P ++ N+L+NG+C+ G ++E
Sbjct: 558 QGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEE 617
Query: 275 AIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILIN 334
A++F +M G P+++T N ++ +C GR D + ++ +G P VTFN L++
Sbjct: 618 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Query: 335 FLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDR 379
+LC+ G + A +L++ + G PN +++ +L ++ +DR
Sbjct: 678 WLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 4/196 (2%)
Query: 88 NNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
N + +R GE++E K + MV+ G D I SLI+G C+ G+ KA + E +
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLERMSV---APDVVTYNTILRTLCDSGKLNL 204
G P I+ N+LI+G CR G ++ A++ + M + PD+VT+N+++ LC +G++
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIED 652
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
+ + K + PD +T+ L+ CK V A LLDE G +P+ T+++L+
Sbjct: 653 GLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQ 712
Query: 265 GICKEGRLDEAIKFLN 280
I + LD +F N
Sbjct: 713 SIIPQETLDRR-RFYN 727
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 116/220 (52%), Gaps = 3/220 (1%)
Query: 85 FESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEI 144
+ N+ + L E++ L M+ G + + + +LI F + G+ ++A +++
Sbjct: 495 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 554
Query: 145 VEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGK 201
+ G+ D ITYN LI G CR GE+D A + E+M AP ++ N ++ LC SG
Sbjct: 555 MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGM 614
Query: 202 LNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNV 261
+ A+E + + + PD++T+ LI C+ + + + +++ +G PD VT+N
Sbjct: 615 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674
Query: 262 LVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSM 301
L++ +CK G + +A L++ G PN T +I+L+S+
Sbjct: 675 LMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 83/152 (54%), Gaps = 3/152 (1%)
Query: 82 FEDFESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRV 141
++ N+ ++ L R GE+++ E M+ G P I C LI G C+ G +A
Sbjct: 562 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEF 621
Query: 142 MEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERMS---VAPDVVTYNTILRTLCD 198
+ + G+ PD++T+N LI+G CR G I++ L + ++ + PD VT+NT++ LC
Sbjct: 622 QKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681
Query: 199 SGKLNLAMEVLHKQLEKECYPDVITYTILIEA 230
G + A +L + +E P+ T++IL+++
Sbjct: 682 GGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Score = 39.7 bits (91), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 61/146 (41%), Gaps = 1/146 (0%)
Query: 434 YNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLE 493
Y +I L G+ + +LL +M+ +G+ + S++ + G + +L ++
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 173
Query: 494 RL-GVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLA 552
+ P +YN ++ L A ++ DM++R PT T+ ++++
Sbjct: 174 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEI 233
Query: 553 KEALDLLNQLCSRGVVKKSSAEQVAV 578
AL LL + G V S Q +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLI 259
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 289 bits (739), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 160/479 (33%), Positives = 269/479 (56%), Gaps = 7/479 (1%)
Query: 96 RNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATR-VMEIVEDSGAVPDV 154
R G L+ GF L +++ G D I T L++G C +T A V+ + + G +P+V
Sbjct: 99 RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNV 158
Query: 155 ITYNVLISGYCRLGEIDNALQVLERMS------VAPDVVTYNTILRTLCDSGKLNLAMEV 208
+YN+L+ G C AL++L M+ PDVV+Y T++ G + A
Sbjct: 159 FSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYST 218
Query: 209 LHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICK 268
H+ L++ PDV+TY +I A CK + +AM++L+ M G +PD +TYN +++G C
Sbjct: 219 YHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 278
Query: 269 EGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVT 328
G+ EAI FL M S G +P+V+T+++++ +C GR M+A ++ M +G P + T
Sbjct: 279 SGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITT 338
Query: 329 FNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMV 388
+ L+ KG L +L+ M ++G P+ ++ ++ + K+ K+D+A+ M
Sbjct: 339 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMR 398
Query: 389 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTE 448
+G P+ VTY ++ LCK G+V+ A+ Q+ ++ SP I YN++I GL K E
Sbjct: 399 QQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWE 458
Query: 449 QAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIM 508
+A +L+ EM +G+ +TI ++S++ +EG+V E+ KLF + R+GV+PNVITYN+++
Sbjct: 459 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI 518
Query: 509 LGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
G C A + A+ +L+ MV+ KP TY+ LI G ++AL L ++ S GV
Sbjct: 519 NGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577
Score = 285 bits (728), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/485 (32%), Positives = 264/485 (54%), Gaps = 6/485 (1%)
Query: 85 FESNNHLRRLVRNGELEEGFKFLESMVYH---GDIPDIIPCTSLIRGFCKVGKTRKATRV 141
F N L+ L +E + L M G PD++ T++I GF K G + KA
Sbjct: 159 FSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYST 218
Query: 142 MEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCD 198
+ D G +PDV+TYN +I+ C+ +D A++VL M V PD +TYN+IL C
Sbjct: 219 YHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 278
Query: 199 SGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVT 258
SG+ A+ L K PDV+TY++L++ CK +A K+ D M +G P++ T
Sbjct: 279 SGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITT 338
Query: 259 YNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMV 318
Y L+ G +G L E L+ M G P+ +I++ + G+ A + ++M
Sbjct: 339 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMR 398
Query: 319 LKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMD 378
+G +P+ VT+ +I LC+ G + A+ E+M G +P ++ YN ++HG C K +
Sbjct: 399 QQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWE 458
Query: 379 RAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVI 438
RA E + M+ RG + + +N+++ + CK+G+V + ++ + P +ITYNT+I
Sbjct: 459 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI 518
Query: 439 DGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVR 498
+G GK ++AMKLL M + GLKP+T+TYS+L+ G + ++++A+ LF ++E GV
Sbjct: 519 NGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVS 578
Query: 499 PNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDL 558
P++ITYN I+ GL + R+T A ++ + + +TY I++ G+ L +AL +
Sbjct: 579 PDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQM 638
Query: 559 LNQLC 563
LC
Sbjct: 639 FQNLC 643
Score = 249 bits (635), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 259/478 (54%), Gaps = 7/478 (1%)
Query: 88 NNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
N+ + L + +++ + L +MV +G +PD + S++ G+C G+ ++A ++ +
Sbjct: 235 NSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRS 294
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLERMS---VAPDVVTYNTILRTLCDSGKLNL 204
G PDV+TY++L+ C+ G A ++ + M+ + P++ TY T+L+ G L
Sbjct: 295 DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVE 354
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
+L + +PD ++ILI A K+ V QAM + +MR +G P+ VTY ++
Sbjct: 355 MHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414
Query: 265 GICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSP 324
+CK GR+++A+ + M G P I +N ++ +C+ +W AE L+ EM+ +G
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474
Query: 325 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYL 384
+ + FN +I+ C++G + + + E M + G PN ++YN +++G+C KMD A++ L
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534
Query: 385 EIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKV 444
MVS G P+ VTY+TL+ CK +++ A+ + ++ + SP +ITYN ++ GL +
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594
Query: 445 GKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITY 504
+T A +L + G + + TY+ ++ GL + D+A+++F +L + ++ T+
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654
Query: 505 NSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQL 562
N ++ L K + A D+ + P TY ++ E I +GL +E L+QL
Sbjct: 655 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE----LDQL 708
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 210/390 (53%), Gaps = 4/390 (1%)
Query: 182 VAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAM 241
V PD+ TY ++ C +G+L+L L ++K D I +T L++ C + AM
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 242 KL-LDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMP---SYGCQPNVITHNII 297
+ L M GCIP+V +YN+L+ G+C E R EA++ L+ M G P+V+++ +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 298 LRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGC 357
+ G A EM+ +G P VVT+N +I LC+ + +A+++L M K+G
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 358 TPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 417
P+ ++YN +LHG+C + AI +L+ M S G PD+VTY+ L+ LCK+G+ A +
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322
Query: 418 ILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLS 477
I + ++ + P + TY T++ G + G + LL+ M G+ PD +S L+ +
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382
Query: 478 REGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEA 537
++GKVD+A+ +F + + G+ PN +TY +++ LCK+ + A+ M+ P
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442
Query: 538 TYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
Y LI G+ + A +L+ ++ RG+
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGI 472
Score = 185 bits (470), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 199/398 (50%), Gaps = 3/398 (0%)
Query: 91 LRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGA 150
L+ G L E L+ MV +G PD + LI + K GK +A V + G
Sbjct: 343 LQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 402
Query: 151 VPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAME 207
P+ +TY +I C+ G +++A+ E+M ++P + YN+++ LC K A E
Sbjct: 403 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 462
Query: 208 VLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGIC 267
++ + L++ + I + +I++ CKE V ++ KL + M G P+V+TYN L+NG C
Sbjct: 463 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYC 522
Query: 268 KEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVV 327
G++DEA+K L+ M S G +PN +T++ ++ C R DA L EM G SP ++
Sbjct: 523 LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDII 582
Query: 328 TFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIM 387
T+NI++ L + A ++ ++ + G +YN +LHG CK K D A++ + +
Sbjct: 583 TYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNL 642
Query: 388 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKT 447
+ T+N ++ AL K G+ D A ++ S+ P TY + + + G
Sbjct: 643 CLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL 702
Query: 448 EQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEA 485
E+ +L M G D+ + +V L + G++ A
Sbjct: 703 EELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 176/366 (48%), Gaps = 4/366 (1%)
Query: 94 LVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPD 153
L ++G +E+ + E M+ G P I SLI G C K +A ++ + D G +
Sbjct: 416 LCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLN 475
Query: 154 VITYNVLISGYCRLG---EIDNALQVLERMSVAPDVVTYNTILRTLCDSGKLNLAMEVLH 210
I +N +I +C+ G E + +++ R+ V P+V+TYNT++ C +GK++ AM++L
Sbjct: 476 TIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS 535
Query: 211 KQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEG 270
+ P+ +TY+ LI CK S + A+ L EM + G PD++TYN+++ G+ +
Sbjct: 536 GMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTR 595
Query: 271 RLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFN 330
R A + + G Q + T+NIIL +C DA ++ + L TFN
Sbjct: 596 RTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFN 655
Query: 331 ILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSR 390
I+I+ L + G A D+ +G PN +Y + + ++ + M
Sbjct: 656 IMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN 715
Query: 391 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQA 450
GC D N ++ L + G++ A L+ + KH S T + ID LS GK ++
Sbjct: 716 GCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG-GKYQEY 774
Query: 451 MKLLEE 456
+ L E
Sbjct: 775 YRFLPE 780
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 184/399 (46%), Gaps = 6/399 (1%)
Query: 95 VRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDV 154
+ G++++ M G P+ + ++I CK G+ A E + D G P
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441
Query: 155 ITYNVLISGYCRLGEIDNA----LQVLERMSVAPDVVTYNTILRTLCDSGKLNLAMEVLH 210
I YN LI G C + + A L++L+R + + + +N+I+ + C G++ + ++
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDR-GICLNTIFFNSIIDSHCKEGRVIESEKLFE 500
Query: 211 KQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEG 270
+ P+VITY LI C + +AMKLL M + G P+ VTY+ L+NG CK
Sbjct: 501 LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS 560
Query: 271 RLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFN 330
R+++A+ +M S G P++IT+NIIL+ + T R A+ L + G + T+N
Sbjct: 561 RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 620
Query: 331 ILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSR 390
I+++ LC+ L A+ + + + + ++N ++ K + D A + S
Sbjct: 621 IILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSN 680
Query: 391 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQA 450
G P+ TY + + G ++ ++ + + C+ N ++ L + G+ +A
Sbjct: 681 GLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
Query: 451 MKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLF 489
L + K + T S + LS GK E +
Sbjct: 741 GTYLSMIDEKHFSLEASTASLFIDLLS-GGKYQEYYRFL 778
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 285 bits (730), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 155/522 (29%), Positives = 275/522 (52%), Gaps = 42/522 (8%)
Query: 92 RRLVRNG----ELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
R ++RNG +L++ MV +P I L+ K+ K + E ++
Sbjct: 54 REILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQR 113
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNL 204
G ++ TYN+LI+ +CR +I AL +L +M P +VT +++L C +++
Sbjct: 114 LGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 173
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
A+ ++ + +E PD IT+T LI + +A+ L+D M +GC P++VTY V+VN
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 265 GICKEGRLDEAIKFLN-----------------------------------DMPSYGCQP 289
G+CK G +D A LN +M + G +P
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293
Query: 290 NVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDIL 349
NVIT++ ++ +C+ RW DA RLL++M+ + +P+VVTFN LI+ ++G L A +
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 350 EKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKD 409
++M K P+ +Y+ +++GFC ++D A E+M+S+ C+P++VTYNTL+ CK
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Query: 410 GKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITY 469
++D VE+ ++S + +TY T+I G + + A + ++M + G+ P+ +TY
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Query: 470 SSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVT 529
++L+ GL + GK+++A+ +F L+R + P + TYN ++ G+CKA + D+ +
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 533
Query: 530 RSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKS 571
+ KP Y +I G +GL +EA L ++ G + S
Sbjct: 534 KGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 200/407 (49%), Gaps = 38/407 (9%)
Query: 100 LEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNV 159
+ + ++ MV G PD I T+LI G K +A +++ + G P+++TY V
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 160 LISGYCRLGEIDNALQVLERMSVA------------------------------------ 183
+++G C+ G+ID A +L +M A
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 184 --PDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAM 241
P+V+TY++++ LC+ + + A +L +E++ P+V+T+ LI+A KE + +A
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 242 KLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSM 301
KL DEM + PD+ TY+ L+NG C RLDEA M S C PNV+T+N ++
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410
Query: 302 CSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNS 361
C R + L EM +G + VT+ LI+ + A + ++M G PN
Sbjct: 411 CKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI 470
Query: 362 LSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 421
++YN +L G CK K+++A+ E + P I TYN ++ +CK GKV+ ++
Sbjct: 471 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCS 530
Query: 422 LSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTIT 468
LS K P +I YNT+I G + G E+A L +MR G PD+ T
Sbjct: 531 LSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 196/380 (51%)
Query: 189 YNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMR 248
Y ILR S KL+ A+ + ++ P + + L+ A K + L ++M+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 249 NKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWM 308
G ++ TYN+L+N C+ ++ A+ L M G +P+++T + +L C R
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 309 DAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVL 368
DA L+ +MV G P +TF LI+ L A+ ++++M + GC PN ++Y V+
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 369 HGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCS 428
+G CK +D A L M + ++V Y+T++ +LCK D A+ + ++ NK
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 429 PVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKL 488
P +ITY+++I L + A +LL +M + + P+ +T+++L+ +EGK+ EA KL
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 489 FHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAY 548
+ ++ + + P++ TY+S++ G C + A + M+++ C P TY LI G
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 549 EGLAKEALDLLNQLCSRGVV 568
E ++L ++ RG+V
Sbjct: 413 AKRIDEGVELFREMSQRGLV 432
Score = 40.8 bits (94), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 60 AFVQGHLNNGHISSGM------ENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYH 113
+ G NG + M + S + + N + + + G++E+G+ S+
Sbjct: 475 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 534
Query: 114 GDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPD 153
G PD+I ++I GFC+ G +A + + + G +PD
Sbjct: 535 GVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 284 bits (726), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 159/531 (29%), Positives = 276/531 (51%), Gaps = 46/531 (8%)
Query: 92 RRLVRNG-----ELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVE 146
R ++RN ++++ MV P I+ L+ K+ K + E ++
Sbjct: 51 REILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQ 110
Query: 147 DSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLN 203
G D+ TY++ I+ +CR ++ AL VL +M PD+VT +++L C S +++
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 204 LAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLV 263
A+ ++ + +E PD T+T LI + +A+ L+D+M +GC PD+VTY +V
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 264 NGICKEGRLDEAIKFLN-----------------------------------DMPSYGCQ 288
NG+CK G +D A+ LN +M + G +
Sbjct: 231 NGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIR 290
Query: 289 PNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDI 348
PNV+T+N ++ +C+ GRW DA RLL+ M+ K +P+VVTFN LI+ ++G L A +
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Query: 349 LEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCK 408
E+M + P++++YN +++GFC ++D A + + MVS+ C P+I TYNTL+ CK
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Query: 409 DGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTIT 468
+V+ VE+ ++S + +TY T+I G + G + A + ++M + + D +T
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMT 470
Query: 469 YSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMV 528
YS L+ GL GK+D A+ +F L++ + N+ YN+++ G+CKA + A D+ +
Sbjct: 471 YSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL- 529
Query: 529 TRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSSAEQVAVK 579
S KP TY +I G+ + L +EA DL ++ G + S ++
Sbjct: 530 --SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 204/394 (51%), Gaps = 6/394 (1%)
Query: 83 EDFESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVM 142
+ F + L + + E ++ MV G PD++ +++ G CK G A ++
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 143 EIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDS 199
+E + +V+ +N +I C+ ++ A+ + M + P+VVTYN+++ LC+
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 200 GKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTY 259
G+ + A +L LEK+ P+V+T+ LI+A KE + +A KL +EM + PD +TY
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Query: 260 NVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVL 319
N+L+NG C RLDEA + M S C PN+ T+N ++ C R D L EM
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426
Query: 320 KGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDR 379
+G + VT+ +I + G A + ++M + + ++Y+ +LHG C K+D
Sbjct: 427 RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDT 486
Query: 380 AIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVID 439
A+ + + +I YNT++ +CK GKV A ++ LS K P ++TYNT+I
Sbjct: 487 ALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMIS 543
Query: 440 GLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLV 473
GL ++A L +M+ G P++ TY++L+
Sbjct: 544 GLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Score = 202 bits (513), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 203/381 (53%), Gaps = 1/381 (0%)
Query: 189 YNTILRT-LCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEM 247
Y ILR L D K++ A+++ ++ +P ++ + L+ A K + + L ++M
Sbjct: 50 YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 248 RNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRW 307
+ G D+ TY++ +N C+ +L A+ L M G +P+++T + +L C + R
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 308 MDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPV 367
DA L+ +MV G P TF LI+ L A+ ++++M + GC P+ ++Y V
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 368 LHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHC 427
++G CK +D A+ L M + ++V +NT++ +LCK V+VAV++ ++ K
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Query: 428 SPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIK 487
P ++TYN++I+ L G+ A +LL M K + P+ +T+++L+ +EGK+ EA K
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEK 349
Query: 488 LFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIA 547
L ++ + + P+ ITYN ++ G C + A + MV++ C P TY LI G
Sbjct: 350 LHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Query: 548 YEGLAKEALDLLNQLCSRGVV 568
++ ++L ++ RG+V
Sbjct: 410 KCKRVEDGVELFREMSQRGLV 430
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 125/457 (27%), Positives = 209/457 (45%), Gaps = 71/457 (15%)
Query: 100 LEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNV 159
+ + ++ MV G PD T+LI G K +A +++ + G PD++TY
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 160 LISGYCRLGEIDNALQVLERMSVA------------------------------------ 183
+++G C+ G+ID AL +L +M A
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 184 --PDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAM 241
P+VVTYN+++ LC+ G+ + A +L LEK+ P+V+T+ LI+A KE + +A
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348
Query: 242 KLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSM 301
KL +EM + PD +TYN+L+NG C RLDEA + M S C PN+ T+N ++
Sbjct: 349 KLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Query: 302 CSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNS 361
C R D L EM +G + VT+ +I + G A + ++M + +
Sbjct: 409 CKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDI 468
Query: 362 LSYNPVLHGFCKEKKMDRAI--------------------------------EYLEIMVS 389
++Y+ +LHG C K+D A+ E ++ S
Sbjct: 469 MTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCS 528
Query: 390 RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQ 449
PD+VTYNT+++ LC + A ++ ++ P TYNT+I +
Sbjct: 529 LSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAA 588
Query: 450 AMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAI 486
+ +L++EMR+ G D T SLV + +G++D++
Sbjct: 589 SAELIKEMRSSGFVGDASTI-SLVTNMLHDGRLDKSF 624
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 172/339 (50%), Gaps = 9/339 (2%)
Query: 88 NNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
N+ + L G + + L +M+ P+++ +LI F K GK +A ++ E +
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNL 204
PD ITYN+LI+G+C +D A Q+ + M P++ TYNT++ C ++
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
+E+ + ++ + +TYT +I+ + A + +M + D++TY++L++
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 265 GICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSP 324
G+C G+LD A+ + + N+ +N ++ MC G+ +A L + +K P
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---P 533
Query: 325 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYL 384
VVT+N +I+ LC K LL A D+ KM + G PNS +YN ++ ++ + E +
Sbjct: 534 DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELI 593
Query: 385 EIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS 423
+ M S G D T +L+T + DG++D + LN LS
Sbjct: 594 KEMRSSGFVGDASTI-SLVTNMLHDGRLDKS--FLNMLS 629
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 284 bits (726), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 155/488 (31%), Positives = 263/488 (53%), Gaps = 3/488 (0%)
Query: 96 RNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVI 155
R +L F + ++ G PD + ++LI G C G+ +A +++ + + G P +I
Sbjct: 119 RCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLI 178
Query: 156 TYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQ 212
T N L++G C G++ +A+ +++RM P+ VTY +L+ +C SG+ LAME+L K
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 213 LEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRL 272
E++ D + Y+I+I+ CK+ + A L +EM KG D++ Y L+ G C GR
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 273 DEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNIL 332
D+ K L DM P+V+ + ++ G+ +AE L EM+ +G SP VT+ L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 333 INFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGC 392
I+ C++ L +A +L+ M GC PN ++N +++G+CK +D +E M RG
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 393 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMK 452
D VTYNTL+ C+ GK++VA E+ ++ ++ P +++Y ++DGL G+ E+A++
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 453 LLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLC 512
+ E++ ++ D Y+ ++ G+ KVD+A LF L GV+P+V TYN ++ GLC
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 513 KARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSS 572
K A + M P TY ILI EG A ++ L+ ++ G +S
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAS 598
Query: 573 AEQVAVKM 580
++ V M
Sbjct: 599 TVKMVVDM 606
Score = 275 bits (704), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 139/433 (32%), Positives = 253/433 (58%), Gaps = 4/433 (0%)
Query: 130 CKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDV 186
C+ K A M + G PD +T++ LI+G C G + AL++++RM P +
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 187 VTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDE 246
+T N ++ LC +GK++ A+ ++ + +E P+ +TY +++ CK AM+LL +
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 247 MRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGR 306
M + D V Y+++++G+CK+G LD A N+M G + ++I + ++R C GR
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 307 WMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNP 366
W D +LL +M+ + +P VV F+ LI+ ++G L A ++ ++M + G +P++++Y
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 367 VLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKH 426
++ GFCKE ++D+A L++MVS+GC P+I T+N L+ CK +D +E+ ++S +
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 427 CSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAI 486
+TYNT+I G ++GK E A +L +EM ++ ++PD ++Y L+ GL G+ ++A+
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 487 KLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGI 546
++F +E+ + ++ YN I+ G+C A + A D+ + + KP TY I+I G+
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537
Query: 547 AYEGLAKEALDLL 559
+G EA DLL
Sbjct: 538 CKKGSLSEA-DLL 549
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/474 (30%), Positives = 245/474 (51%), Gaps = 11/474 (2%)
Query: 94 LVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPD 153
L G + E + ++ MV G P +I +L+ G C GK A +++ + ++G P+
Sbjct: 152 LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211
Query: 154 VITYNVLISGYCRLGEIDNALQVLERMS---VAPDVVTYNTILRTLCDSGKLNLAMEVLH 210
+TY ++ C+ G+ A+++L +M + D V Y+ I+ LC G L+ A + +
Sbjct: 212 EVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 271
Query: 211 KQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEG 270
+ K D+I YT LI C KLL +M + PDVV ++ L++ KEG
Sbjct: 272 EMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEG 331
Query: 271 RLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFN 330
+L EA + +M G P+ +T+ ++ C + A +L MV KGC P++ TFN
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391
Query: 331 ILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSR 390
ILIN C+ L+ +++ KM G ++++YN ++ GFC+ K++ A E + MVSR
Sbjct: 392 ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451
Query: 391 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQA 450
PDIV+Y LL LC +G+ + A+EI ++ + YN +I G+ K + A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511
Query: 451 MKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIM-- 508
L + KG+KPD TY+ ++GGL ++G + EA LF +E G PN TYN ++
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Query: 509 -LGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEG-LAKEALDLLN 560
LG A ++ + I + + R +A+ ++ + +G L K LD+L+
Sbjct: 572 HLGEGDATKSAKLI----EEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDMLS 621
Score = 221 bits (564), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 226/414 (54%), Gaps = 3/414 (0%)
Query: 152 PDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEV 208
P +I ++ L S R + D L + ++M +A ++ T + ++ C KL+LA
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 209 LHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICK 268
+ K ++ PD +T++ LI C E V +A++L+D M G P ++T N LVNG+C
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 269 EGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVT 328
G++ +A+ ++ M G QPN +T+ +L+ MC +G+ A LL +M + V
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 329 FNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMV 388
++I+I+ LC+ G L A ++ +M G + + Y ++ GFC + D + L M+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 389 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTE 448
R PD+V ++ L+ K+GK+ A E+ ++ + SP +TY ++IDG K + +
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 449 QAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIM 508
+A +L+ M +KG P+ T++ L+ G + +D+ ++LF + GV + +TYN+++
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 509 LGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQL 562
G C+ + A ++ +MV+R +P +Y IL++G+ G ++AL++ ++
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 214/401 (53%), Gaps = 5/401 (1%)
Query: 171 DNALQVLERMSVA---PDVVTYNTILRTLCDSGKLNLAMEVLHKQLE-KECYPDVITYTI 226
D+A+ + + M+ + P ++ ++ + + + + +L ++ L KQ+E K ++ T +I
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLD-LCKQMELKGIAHNLYTLSI 112
Query: 227 LIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYG 286
+I C+ + A + ++ G PD VT++ L+NG+C EGR+ EA++ ++ M G
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 287 CQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAI 346
+P +IT N ++ +C G+ DA L+ MV G P+ VT+ ++ +C+ G A+
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 347 DILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTAL 406
++L KM + +++ Y+ ++ G CK+ +D A M +G DI+ Y TL+
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 407 CKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDT 466
C G+ D ++L + + +P ++ ++ +ID K GK +A +L +EM +G+ PDT
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 467 ITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILAD 526
+TY+SL+ G +E ++D+A + + G PN+ T+N ++ G CKA +++
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Query: 527 MVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
M R TY LI+G G + A +L ++ SR V
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 201/394 (51%)
Query: 175 QVLERMSVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKE 234
+V +S V+Y LR+ K + A+++ + P +I ++ L +
Sbjct: 26 RVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVART 85
Query: 235 SGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITH 294
+ L +M KG ++ T ++++N C+ +L A + + G +P+ +T
Sbjct: 86 KQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTF 145
Query: 295 NIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPK 354
+ ++ +C GR +A L+ MV G P+++T N L+N LC G + A+ ++++M +
Sbjct: 146 STLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE 205
Query: 355 HGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDV 414
G PN ++Y PVL CK + A+E L M R D V Y+ ++ LCKDG +D
Sbjct: 206 TGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDN 265
Query: 415 AVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVG 474
A + N++ K +I Y T+I G G+ + KLL +M + + PD + +S+L+
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
Query: 475 GLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKP 534
+EGK+ EA +L ++ + G+ P+ +TY S++ G CK Q +A +L MV++ C P
Sbjct: 326 CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 385
Query: 535 TEATYTILIEGIAYEGLAKEALDLLNQLCSRGVV 568
T+ ILI G L + L+L ++ RGVV
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 283 bits (725), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 155/474 (32%), Positives = 252/474 (53%), Gaps = 3/474 (0%)
Query: 94 LVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPD 153
L R +L L M+ G P I+ SL+ GFC + +A +++ + + G PD
Sbjct: 110 LCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPD 169
Query: 154 VITYNVLISGYCRLGEIDNALQVLERMSV---APDVVTYNTILRTLCDSGKLNLAMEVLH 210
+T+ L+ G + + A+ ++ERM V PD+VTY ++ LC G+ +LA+ +L+
Sbjct: 170 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 229
Query: 211 KQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEG 270
K + + DV+ Y+ +I++ CK V A+ L EM NKG PDV TY+ L++ +C G
Sbjct: 230 KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 289
Query: 271 RLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFN 330
R +A + L+DM PNV+T N ++ + G+ ++AE+L EM+ + P++VT+N
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 331 ILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSR 390
LIN C L A I M C P+ ++YN +++GFCK KK+ +E M R
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Query: 391 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQA 450
G + VTY TL+ + D A + Q+ + P ++TYNT++DGL K GK E+A
Sbjct: 410 GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Query: 451 MKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLG 510
M + E ++ ++PD TY+ + G+ + GKV++ LF L GV+P+VI YN+++ G
Sbjct: 470 MVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISG 529
Query: 511 LCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCS 564
CK A + M P TY LI +G + +L+ ++ S
Sbjct: 530 FCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583
Score = 282 bits (721), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 153/540 (28%), Positives = 275/540 (50%), Gaps = 42/540 (7%)
Query: 82 FEDFESNNHLRRLVRNG----ELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRK 137
F + + +L RN +L+E MV P I+ + L+ K+ K
Sbjct: 24 FSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDL 83
Query: 138 ATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILR 194
E +E G ++ TYN++I+ CR ++ AL +L +M P +VT N++L
Sbjct: 84 VISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLN 143
Query: 195 TLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIP 254
C +++ A+ ++ + +E PD +T+T L+ + + +A+ L++ M KGC P
Sbjct: 144 GFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQP 203
Query: 255 DVVTYNVLVNGICKEGRLDEAIKFLN---------------------------------- 280
D+VTY ++NG+CK G D A+ LN
Sbjct: 204 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLF 263
Query: 281 -DMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRK 339
+M + G +P+V T++ ++ +C+ GRW DA RLL++M+ + +P+VVTFN LI+ ++
Sbjct: 264 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKE 323
Query: 340 GLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTY 399
G L A + ++M + PN ++YN +++GFC ++D A + +MVS+ C PD+VTY
Sbjct: 324 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383
Query: 400 NTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRT 459
NTL+ CK KV +E+ +S + +TY T+I G + + A + ++M +
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Query: 460 KGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYR 519
G+ P+ +TY++L+ GL + GK+++A+ +F L++ + P++ TYN + G+CKA +
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Query: 520 AIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSSAEQVAVK 579
D+ + + KP Y +I G +GL +EA L ++ G + S ++
Sbjct: 504 GWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIR 563
Score = 268 bits (685), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 151/478 (31%), Positives = 257/478 (53%), Gaps = 7/478 (1%)
Query: 88 NNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
N+ L + E ++ MV G PD + T+L+ G + K +A ++E +
Sbjct: 139 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 198
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLERMS---VAPDVVTYNTILRTLCDSGKLNL 204
G PD++TY +I+G C+ GE D AL +L +M + DVV Y+T++ +LC ++
Sbjct: 199 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDD 258
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
A+ + + K PDV TY+ LI C A +LL +M + P+VVT+N L++
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 265 GICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSP 324
KEG+L EA K ++M PN++T+N ++ C R +A+++ MV K C P
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
Query: 325 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYL 384
VVT+N LIN C+ + +++ M + G N+++Y ++HGF + D A
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 385 EIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKV 444
+ MVS G +P+I+TYNTLL LCK+GK++ A+ + L P + TYN + +G+ K
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA 498
Query: 445 GKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITY 504
GK E L + KG+KPD I Y++++ G ++G +EA LF ++ G P+ TY
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558
Query: 505 NSIMLGLCKARQTYRAIDILADMVTRSCK-PTEATYTILIEGIAYEG-LAKEALDLLN 560
N+++ + + +++ +M RSC+ +A+ L+ + ++G L K L++L+
Sbjct: 559 NTLIRAHLRDGDKAASAELIKEM--RSCRFAGDASTYGLVTDMLHDGRLDKGFLEVLS 614
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 283 bits (723), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/498 (28%), Positives = 274/498 (55%), Gaps = 3/498 (0%)
Query: 85 FESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEI 144
FE N L + + + + E M G ++ LI FC+ + A ++
Sbjct: 11 FEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGK 70
Query: 145 VEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGK 201
+ G P ++T + L++GYC I +A+ ++++M PD +T+ T++ L K
Sbjct: 71 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130
Query: 202 LNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNV 261
+ A+ ++ + +++ C P+++TY +++ CK + A LL++M DVV +N
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190
Query: 262 LVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKG 321
+++ +CK +D+A+ +M + G +PNV+T++ ++ +CS GRW DA +LL++M+ K
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 322 CSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAI 381
+P++VTFN LI+ ++G A + + M K P+ +YN +++GFC ++D+A
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310
Query: 382 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGL 441
+ E MVS+ C+PD+ TYNTL+ CK +V+ E+ ++S++ +TY T+I GL
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Query: 442 SKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNV 501
G + A K+ ++M + G+ PD +TYS L+ GL GK+++A+++F +++ ++ ++
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 502 ITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQ 561
Y +++ G+CKA + D+ + + KP TY +I G+ + L +EA LL +
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490
Query: 562 LCSRGVVKKSSAEQVAVK 579
+ G + S ++
Sbjct: 491 MKEDGPLPDSGTYNTLIR 508
Score = 276 bits (706), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 151/488 (30%), Positives = 255/488 (52%), Gaps = 3/488 (0%)
Query: 96 RNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVI 155
R ++ L M+ G P I+ +SL+ G+C + A +++ + + G PD I
Sbjct: 57 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 116
Query: 156 TYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQ 212
T+ LI G + A+ +++RM P++VTY ++ LC G ++LA +L+K
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 213 LEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRL 272
+ DV+ + +I++ CK V A+ L EM KG P+VVTY+ L++ +C GR
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 273 DEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNIL 332
+A + L+DM PN++T N ++ + G++++AE+L +M+ + P + T+N L
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Query: 333 INFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGC 392
IN C L +A + E M C P+ +YN ++ GFCK K+++ E M RG
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Query: 393 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMK 452
D VTY TL+ L DG D A ++ Q+ + P ++TY+ ++DGL GK E+A++
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416
Query: 453 LLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLC 512
+ + M+ +K D Y++++ G+ + GKVD+ LF L GV+PNV+TYN+++ GLC
Sbjct: 417 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 476
Query: 513 KARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSS 572
R A +L M P TY LI +G + +L+ ++ S V +S
Sbjct: 477 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAS 536
Query: 573 AEQVAVKM 580
+ M
Sbjct: 537 TIGLVANM 544
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 208/384 (54%)
Query: 184 PDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKL 243
P + +N +L + K +L + + K ++ TY ILI C+ S + A+ L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 244 LDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCS 303
L +M G P +VT + L+NG C R+ +A+ ++ M G +P+ IT ++ +
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 304 TGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLS 363
+ +A L+ MV +GC P++VT+ +++N LC++G + A ++L KM + +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 364 YNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS 423
+N ++ CK + +D A+ + M ++G P++VTY++L++ LC G+ A ++L+ +
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 424 NKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVD 483
K +P L+T+N +ID K GK +A KL ++M + + PD TY+SL+ G ++D
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 484 EAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILI 543
+A ++F + P++ TYN+++ G CK+++ ++ +M R TYT LI
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 544 EGIAYEGLAKEALDLLNQLCSRGV 567
+G+ ++G A + Q+ S GV
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGV 391
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 184/350 (52%)
Query: 219 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKF 278
P + + L+ A K + L ++M+ G ++ TYN+L+N C+ ++ A+
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 279 LNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCR 338
L M G +P+++T + +L C R DA L+ +MV G P +TF LI+ L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 339 KGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVT 398
A+ ++++M + GC PN ++Y V++G CK +D A L M + D+V
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 399 YNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMR 458
+NT++ +LCK VD A+ + ++ K P ++TY+++I L G+ A +LL +M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 459 TKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTY 518
K + P+ +T+++L+ +EGK EA KL D+ + + P++ TYNS++ G C +
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 519 RAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVV 568
+A + MV++ C P TY LI+G ++ +L ++ RG+V
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 109/216 (50%)
Query: 352 MPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGK 411
M K P+ +N +L K KK D I E M G ++ TYN L+ C+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 412 VDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSS 471
+ +A+ +L ++ P ++T +++++G + A+ L+++M G +PDTIT+++
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 472 LVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRS 531
L+ GL K EA+ L + + G +PN++TY ++ GLCK A ++L M
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 532 CKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
+ + +I+ + +AL+L ++ ++G+
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 216
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 281 bits (719), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/511 (29%), Positives = 274/511 (53%), Gaps = 5/511 (0%)
Query: 74 GMENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVG 133
GME + + + + + R +L F L G PD I ++L+ GFC G
Sbjct: 95 GMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEG 154
Query: 134 KTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYN 190
+ +A +++ + + PD++T + LI+G C G + AL +++RM PD VTY
Sbjct: 155 RVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 214
Query: 191 TILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNK 250
+L LC SG LA+++ K E+ V+ Y+I+I++ CK+ A+ L +EM K
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 251 GCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDA 310
G DVVTY+ L+ G+C +G+ D+ K L +M P+V+T + ++ G+ ++A
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 311 ERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHG 370
+ L EM+ +G +P +T+N LI+ C++ L A + + M GC P+ ++Y+ +++
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 371 FCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPV 430
+CK K++D + + S+G P+ +TYNTL+ C+ GK++ A E+ ++ ++ P
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 431 LITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFH 490
++TY ++DGL G+ +A+++ E+M+ + Y+ ++ G+ KVD+A LF
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC 514
Query: 491 DLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEG-IAYE 549
L GV+P+V+TYN ++ GLCK A + M C P + TY ILI +
Sbjct: 515 SLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGS 574
Query: 550 GLAKEALDLLNQLCSRGVVKKSSAEQVAVKM 580
GL +++L+ ++ G SS ++ + M
Sbjct: 575 GLI-SSVELIEEMKVCGFSADSSTIKMVIDM 604
Score = 276 bits (707), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/464 (30%), Positives = 261/464 (56%), Gaps = 3/464 (0%)
Query: 106 FLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYC 165
F + M +G D+ T +I +C+ K A V+ G PD IT++ L++G+C
Sbjct: 92 FCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFC 151
Query: 166 RLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVI 222
G + A+ +++RM PD+VT +T++ LC G+++ A+ ++ + +E PD +
Sbjct: 152 LEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEV 211
Query: 223 TYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDM 282
TY ++ CK A+ L +M + VV Y+++++ +CK+G D+A+ N+M
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 283 PSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLL 342
G + +V+T++ ++ +C+ G+W D ++L EM+ + P VVTF+ LI+ ++G L
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Query: 343 GRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTL 402
A ++ +M G P++++YN ++ GFCKE + A + ++MVS+GC PDIVTY+ L
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 403 LTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGL 462
+ + CK +VD + + ++S+K P ITYNT++ G + GK A +L +EM ++G+
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Query: 463 KPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAID 522
P +TY L+ GL G++++A+++F +++ + + YN I+ G+C A + A
Sbjct: 452 PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWS 511
Query: 523 ILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRG 566
+ + + KP TY ++I G+ +G EA L ++ G
Sbjct: 512 LFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 205/407 (50%), Gaps = 7/407 (1%)
Query: 172 NALQVLER-------MSVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITY 224
N Q+LE+ S+ ++Y LR K+N A+++ ++ P I +
Sbjct: 14 NFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDF 73
Query: 225 TILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 284
L A + + M G D+ T +++N C++ +L A L
Sbjct: 74 NRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWK 133
Query: 285 YGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGR 344
G +P+ IT + ++ C GR +A L+ MV P +VT + LIN LC KG +
Sbjct: 134 LGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSE 193
Query: 345 AIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLT 404
A+ ++++M ++G P+ ++Y PVL+ CK A++ M R +V Y+ ++
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 405 ALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKP 464
+LCKDG D A+ + N++ K ++TY+++I GL GK + K+L EM + + P
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 465 DTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDIL 524
D +T+S+L+ +EGK+ EA +L++++ G+ P+ ITYNS++ G CK + A +
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 525 ADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKS 571
MV++ C+P TY+ILI + + L ++ S+G++ +
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 281 bits (718), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/486 (29%), Positives = 270/486 (55%), Gaps = 5/486 (1%)
Query: 84 DFESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVME 143
DF N + + + E + M G I + +I FC+ K A M
Sbjct: 90 DF--NRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMG 147
Query: 144 IVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSG 200
+ G PD + +N L++G C + AL++++RM P ++T NT++ LC +G
Sbjct: 148 KIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNG 207
Query: 201 KLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYN 260
K++ A+ ++ + +E P+ +TY ++ CK AM+LL +M + D V Y+
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 261 VLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLK 320
++++G+CK+G LD A N+M G + ++IT+N ++ C+ GRW D +LL +M+ +
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 321 GCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRA 380
SP+VVTF++LI+ ++G L A +L++M + G PN+++YN ++ GFCKE +++ A
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 381 IEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDG 440
I+ +++M+S+GC PDI+T+N L+ CK ++D +E+ ++S + +TYNT++ G
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 441 LSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPN 500
+ GK E A KL +EM ++ ++PD ++Y L+ GL G++++A+++F +E+ + +
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Query: 501 VITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLN 560
+ Y I+ G+C A + A D+ + + K Y I+I + + +A L
Sbjct: 508 IGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFR 567
Query: 561 QLCSRG 566
++ G
Sbjct: 568 KMTEEG 573
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 148/488 (30%), Positives = 265/488 (54%), Gaps = 3/488 (0%)
Query: 96 RNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVI 155
R +L F + ++ G PD + +L+ G C + +A +++ + + G P +I
Sbjct: 135 RCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLI 194
Query: 156 TYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQ 212
T N L++G C G++ +A+ +++RM P+ VTY +L +C SG+ LAME+L K
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 213 LEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRL 272
E+ D + Y+I+I+ CK+ + A L +EM KG D++TYN L+ G C GR
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 273 DEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNIL 332
D+ K L DM PNV+T ++++ S G+ +A++LL EM+ +G +P+ +T+N L
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 333 INFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGC 392
I+ C++ L AI +++ M GC P+ +++N +++G+CK ++D +E M RG
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 393 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMK 452
+ VTYNTL+ C+ GK++VA ++ ++ ++ P +++Y ++DGL G+ E+A++
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALE 494
Query: 453 LLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLC 512
+ ++ ++ D Y ++ G+ KVD+A LF L GV+ + YN ++ LC
Sbjct: 495 IFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELC 554
Query: 513 KARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSS 572
+ +A + M P E TY ILI + A A +L+ ++ S G S
Sbjct: 555 RKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVS 614
Query: 573 AEQVAVKM 580
++ + M
Sbjct: 615 TVKMVINM 622
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 213/400 (53%), Gaps = 3/400 (0%)
Query: 171 DNALQVLERMSVA---PDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTIL 227
D+A+ + M + P V+ +N + + + + L + + + K + T +I+
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 228 IEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGC 287
I C+ + A + ++ G PD V +N L+NG+C E R+ EA++ ++ M G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 288 QPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAID 347
+P +IT N ++ +C G+ DA L+ MV G P+ VT+ ++N +C+ G A++
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 348 ILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALC 407
+L KM + +++ Y+ ++ G CK+ +D A M +G DI+TYNTL+ C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 408 KDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTI 467
G+ D ++L + + SP ++T++ +ID K GK +A +LL+EM +G+ P+TI
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 468 TYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADM 527
TY+SL+ G +E +++EAI++ + G P+++T+N ++ G CKA + +++ +M
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 528 VTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
R TY L++G G + A L ++ SR V
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 196/379 (51%)
Query: 201 KLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYN 260
K + A+++ ++ P VI + L A K + L +M +KG + T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 261 VLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLK 320
+++N C+ +L A + + G +P+ + N +L +C R +A L+ MV
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 321 GCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRA 380
G P+++T N L+N LC G + A+ ++++M + G PN ++Y PVL+ CK + A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 381 IEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDG 440
+E L M R D V Y+ ++ LCKDG +D A + N++ K +ITYNT+I G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 441 LSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPN 500
G+ + KLL +M + + P+ +T+S L+ +EGK+ EA +L ++ + G+ PN
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 501 VITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLN 560
ITYNS++ G CK + AI ++ M+++ C P T+ ILI G + L+L
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 561 QLCSRGVVKKSSAEQVAVK 579
++ RGV+ + V+
Sbjct: 428 EMSLRGVIANTVTYNTLVQ 446
Score = 179 bits (454), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 186/371 (50%), Gaps = 3/371 (0%)
Query: 75 MENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGK 134
ME ++ + + + + L ++G L+ F M G DII +LI GFC G+
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 135 TRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNT 191
+++ + P+V+T++VLI + + G++ A Q+L+ M +AP+ +TYN+
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 192 ILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKG 251
++ C +L A++++ + K C PD++T+ ILI CK + + ++L EM +G
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 252 CIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAE 311
I + VTYN LV G C+ G+L+ A K +M S +P+++++ I+L +C G A
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL 493
Query: 312 RLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGF 371
+ ++ + + I+I+ +C + A D+ +P G ++ +YN ++
Sbjct: 494 EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISEL 553
Query: 372 CKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVL 431
C++ + +A M G PD +TYN L+ A D A E++ ++ + +
Sbjct: 554 CRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADV 613
Query: 432 ITYNTVIDGLS 442
T VI+ LS
Sbjct: 614 STVKMVINMLS 624
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 106/210 (50%)
Query: 358 TPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 417
+ +LSY L K D A++ M+ P ++ +N L +A+ K + ++ +
Sbjct: 50 SDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLA 109
Query: 418 ILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLS 477
+ Q+ +K + + T + +I+ + K A + ++ G +PDT+ +++L+ GL
Sbjct: 110 LCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC 169
Query: 478 REGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEA 537
E +V EA++L + +G +P +IT N+++ GLC + A+ ++ MV +P E
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEV 229
Query: 538 TYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
TY ++ + G A++LL ++ R +
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNI 259
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 279 bits (713), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 152/489 (31%), Positives = 264/489 (53%), Gaps = 14/489 (2%)
Query: 88 NNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSL------IRGFCKVGKTRKATRV 141
N +L RL + + +K +++ + P++ C ++ I C++G+ ++A +
Sbjct: 214 NVYLTRLSK-----DCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHL 268
Query: 142 MEIVEDSGAVPDVITYNVLISGYCRLGEIDNA---LQVLERMSVAPDVVTYNTILRTLCD 198
+ ++E G PDVI+Y+ +++GYCR GE+D ++V++R + P+ Y +I+ LC
Sbjct: 269 LLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR 328
Query: 199 SGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVT 258
KL A E + + + PD + YT LI+ CK + A K EM ++ PDV+T
Sbjct: 329 ICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLT 388
Query: 259 YNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMV 318
Y +++G C+ G + EA K ++M G +P+ +T ++ C G DA R+ M+
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 319 LKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMD 378
GCSP+VVT+ LI+ LC++G L A ++L +M K G PN +YN +++G CK ++
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 379 RAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVI 438
A++ + + G D VTY TL+ A CK G++D A EIL ++ K P ++T+N ++
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 439 DGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVR 498
+G G E KLL M KG+ P+ T++SLV + A ++ D+ GV
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 499 PNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDL 558
P+ TY +++ G CKAR A + +M + + +TY++LI+G EA ++
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 559 LNQLCSRGV 567
+Q+ G+
Sbjct: 689 FDQMRREGL 697
Score = 259 bits (661), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 151/490 (30%), Positives = 245/490 (50%), Gaps = 4/490 (0%)
Query: 94 LVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCK-VGKTRKATRVMEIVEDSGAVP 152
LV G L E + E M+ +G + + C + K KT A V + G
Sbjct: 185 LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCW 244
Query: 153 DVITYNVLISGYCRLGEIDNA---LQVLERMSVAPDVVTYNTILRTLCDSGKLNLAMEVL 209
+V +YN++I C+LG I A L ++E PDV++Y+T++ C G+L+ +++
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 210 HKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKE 269
K P+ Y +I C+ + +A + EM +G +PD V Y L++G CK
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 270 GRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTF 329
G + A KF +M S P+V+T+ I+ C G ++A +L EM KG P VTF
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 330 NILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVS 389
LIN C+ G + A + M + GC+PN ++Y ++ G CKE +D A E L M
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 390 RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQ 449
G P+I TYN+++ LCK G ++ AV+++ + + +TY T++D K G+ ++
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 450 AMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIML 509
A ++L+EM KGL+P +T++ L+ G G +++ KL + + G+ PN T+NS++
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Query: 510 GLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVK 569
C A I DM +R P TY L++G KEA L ++ +G
Sbjct: 605 QYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSV 664
Query: 570 KSSAEQVAVK 579
S V +K
Sbjct: 665 SVSTYSVLIK 674
Score = 240 bits (612), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/413 (31%), Positives = 212/413 (51%), Gaps = 23/413 (5%)
Query: 93 RLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVP 152
R+ + E EE F M+ G +PD + T+LI GFCK G R A++ + P
Sbjct: 328 RICKLAEAEEAF---SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 153 DVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVL 209
DV+TY +ISG+C++G++ A ++ M + PD VT+ ++ C +G + A V
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 210 HKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKE 269
+ ++ C P+V+TYT LI+ CKE + A +LL EM G P++ TYN +VNG+CK
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 270 GRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTF 329
G ++EA+K + + + G + +T+ ++ + C +G A+ +L EM+ KG P++VTF
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 330 NILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVS 389
N+L+N C G+L +L M G PN+ ++N ++ +C + A + M S
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 390 RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQ 449
RG PD TY L+ CK + A + ++ K S + TY+ +I G K K +
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 450 AMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVI 502
A ++ ++MR +GL D E F D + G RP+ I
Sbjct: 685 AREVFDQMRREGLAADK-----------------EIFDFFSDTKYKGKRPDTI 720
Score = 172 bits (436), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 167/328 (50%), Gaps = 3/328 (0%)
Query: 98 GELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITY 157
G++ E K M G PD + T LI G+CK G + A RV + +G P+V+TY
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 158 NVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLE 214
LI G C+ G++D+A ++L M + P++ TYN+I+ LC SG + A++++ +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 215 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDE 274
D +TYT L++A CK + +A ++L EM KG P +VT+NVL+NG C G L++
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 275 AIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILIN 334
K LN M + G PN T N +++ C A + +M +G P T+ L+
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Query: 335 FLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYP 394
C+ + A + ++M G + + +Y+ ++ GF K KK A E + M G
Sbjct: 640 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA 699
Query: 395 DIVTYNTLLTALCKDGKVDVAVEILNQL 422
D ++ K + D V+ ++++
Sbjct: 700 DKEIFDFFSDTKYKGKRPDTIVDPIDEI 727
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 133/294 (45%), Gaps = 46/294 (15%)
Query: 321 GCSPSV--VTFNILINFLCRKGLLGRAIDILEKMPKHGCT-------------------- 358
G P V V F +L++F GLL A + EKM +G
Sbjct: 172 GSDPRVFDVFFQVLVDF----GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 227
Query: 359 ----------------PNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTL 402
N SYN V+H C+ ++ A L +M +G PD+++Y+T+
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 403 LTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGL 462
+ C+ G++D +++ + K P Y ++I L ++ K +A + EM +G+
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 463 KPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAID 522
PDT+ Y++L+ G + G + A K F+++ + P+V+TY +I+ G C+ A
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407
Query: 523 ILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQL----CSRGVVKKSS 572
+ +M + +P T+T LI G G K+A + N + CS VV ++
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 3/205 (1%)
Query: 85 FESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEI 144
F N+ + L ++G +EE K + G D + T+L+ +CK G+ KA +++
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 145 VEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGK 201
+ G P ++T+NVL++G+C G +++ ++L M +AP+ T+N++++ C
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 202 LNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNV 261
L A + + PD TY L++ CK + +A L EM+ KG V TY+V
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 262 LVNGICKEGRLDEAIKFLNDMPSYG 286
L+ G K + EA + + M G
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREG 696
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 100/232 (43%), Gaps = 9/232 (3%)
Query: 60 AFVQGHLNNGHISSG------MENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYH 113
+ V G +G+I E + LN + + ++GE+++ + L+ M+
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 114 GDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNA 173
G P I+ L+ GFC G +++ + G P+ T+N L+ YC + A
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Query: 174 LQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEA 230
+ + M V PD TY +++ C + + A + + K V TY++LI+
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Query: 231 TCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDM 282
K +A ++ D+MR +G D ++ + K R D + ++++
Sbjct: 676 FLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 727
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 278 bits (712), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 149/471 (31%), Positives = 249/471 (52%), Gaps = 4/471 (0%)
Query: 102 EGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLI 161
EG++ M+ G + L+R CK G ++ ++++ V G +P++ TYN+ I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 162 SGYCRLGEIDNALQV---LERMSVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECY 218
G C+ GE+D A+++ L PDV+TYN ++ LC + K A L K + +
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 219 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKF 278
PD TY LI CK V A +++ + G +PD TY L++G+C EG + A+
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 279 LNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCR 338
N+ G +PNVI +N +++ + + G ++A +L EM KG P V TFNIL+N LC+
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK 438
Query: 339 KGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVT 398
G + A +++ M G P+ ++N ++HG+ + KM+ A+E L++M+ G PD+ T
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498
Query: 399 YNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMR 458
YN+LL LCK K + +E + K C+P L T+N +++ L + K ++A+ LLEEM+
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMK 558
Query: 459 TKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLER-LGVRPNVITYNSIMLGLCKARQT 517
K + PD +T+ +L+ G + G +D A LF +E V + TYN I+ +
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNV 618
Query: 518 YRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVV 568
A + +MV R P TY ++++G G L ++ G +
Sbjct: 619 TMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFI 669
Score = 261 bits (668), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 152/488 (31%), Positives = 255/488 (52%), Gaps = 4/488 (0%)
Query: 88 NNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
N LR L + G+++E K L+ ++ G +P++ I+G C+ G+ A R++ + +
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNL 204
G PDVITYN LI G C+ + A L +M + PD TYNT++ C G + L
Sbjct: 280 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQL 339
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
A ++ + PD TY LI+ C E +A+ L +E KG P+V+ YN L+
Sbjct: 340 AERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 399
Query: 265 GICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSP 324
G+ +G + EA + N+M G P V T NI++ +C G DA+ L+ M+ KG P
Sbjct: 400 GLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP 459
Query: 325 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYL 384
+ TFNILI+ + + A++IL+ M +G P+ +YN +L+G CK K + +E
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETY 519
Query: 385 EIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKV 444
+ MV +GC P++ T+N LL +LC+ K+D A+ +L ++ NK +P +T+ T+IDG K
Sbjct: 520 KTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579
Query: 445 GKTEQAMKLLEEM-RTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVIT 503
G + A L +M + T TY+ ++ + + V A KLF ++ + P+ T
Sbjct: 580 GDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639
Query: 504 YNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLC 563
Y ++ G CK L +M+ P+ T +I + E EA +++++
Sbjct: 640 YRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMV 699
Query: 564 SRGVVKKS 571
+G+V ++
Sbjct: 700 QKGLVPEA 707
Score = 248 bits (634), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 147/465 (31%), Positives = 239/465 (51%), Gaps = 13/465 (2%)
Query: 85 FESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEI 144
F N ++ L + GEL+ + + ++ G PD+I +LI G CK K ++A +
Sbjct: 252 FTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGK 311
Query: 145 VEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM-------SVAPDVVTYNTILRTLC 197
+ + G PD TYN LI+GYC+ G + Q+ ER+ PD TY +++ LC
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMV----QLAERIVGDAVFNGFVPDQFTYRSLIDGLC 367
Query: 198 DSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVV 257
G+ N A+ + ++ L K P+VI Y LI+ + + +A +L +EM KG IP+V
Sbjct: 368 HEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQ 427
Query: 258 TYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEM 317
T+N+LVNG+CK G + +A + M S G P++ T NI++ + + +A +L M
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM 487
Query: 318 VLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKM 377
+ G P V T+N L+N LC+ ++ + M + GC PN ++N +L C+ +K+
Sbjct: 488 LDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKL 547
Query: 378 DRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKH-CSPVLITYNT 436
D A+ LE M ++ PD VT+ TL+ CK+G +D A + ++ + S TYN
Sbjct: 548 DEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNI 607
Query: 437 VIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLG 496
+I ++ A KL +EM + L PD TY +V G + G V+ K ++ G
Sbjct: 608 IIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENG 667
Query: 497 VRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTI 541
P++ T ++ LC + Y A I+ MV + P EA TI
Sbjct: 668 FIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP-EAVNTI 711
Score = 240 bits (612), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 135/475 (28%), Positives = 247/475 (52%), Gaps = 3/475 (0%)
Query: 96 RNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVI 155
R G+++E E M ++ P + +++ G +A +V + D G PDV
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 156 TYNVLISGYCRLGEIDNALQVLERMSVAP---DVVTYNTILRTLCDSGKLNLAMEVLHKQ 212
++ + + +C+ AL++L MS +VV Y T++ + E+ K
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 213 LEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRL 272
L + T+ L+ CK+ V + KLLD++ +G +P++ TYN+ + G+C+ G L
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 273 DEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNIL 332
D A++ + + G +P+VIT+N ++ +C ++ +AE L +MV +G P T+N L
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327
Query: 333 INFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGC 392
I C+ G++ A I+ +G P+ +Y ++ G C E + +RA+ + +G
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Query: 393 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMK 452
P+++ YNTL+ L G + A ++ N++S K P + T+N +++GL K+G A
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447
Query: 453 LLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLC 512
L++ M +KG PD T++ L+ G S + K++ A+++ + GV P+V TYNS++ GLC
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Query: 513 KARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
K + ++ MV + C P T+ IL+E + EAL LL ++ ++ V
Sbjct: 508 KTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/410 (33%), Positives = 225/410 (54%), Gaps = 3/410 (0%)
Query: 161 ISGYCRLGEIDNALQVLERMSV---APDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKEC 217
+ Y R G++ A+ V ERM P V +YN I+ L DSG + A +V + ++
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 218 YPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIK 277
PDV ++TI +++ CK S A++LL+ M ++GC +VV Y +V G +E E +
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 278 FLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLC 337
M + G + T N +LR +C G + E+LL +++ +G P++ T+N+ I LC
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 338 RKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIV 397
++G L A+ ++ + + G P+ ++YN +++G CK K A YL MV+ G PD
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 398 TYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEM 457
TYNTL+ CK G V +A I+ P TY ++IDGL G+T +A+ L E
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 458 RTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQT 517
KG+KP+ I Y++L+ GLS +G + EA +L +++ G+ P V T+N ++ GLCK
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442
Query: 518 YRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
A ++ M+++ P T+ ILI G + + + AL++L+ + GV
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 199/397 (50%), Gaps = 4/397 (1%)
Query: 75 MENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGK 134
M N L + + N + + G ++ + + V++G +PD SLI G C G+
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE 371
Query: 135 TRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERMS---VAPDVVTYNT 191
T +A + G P+VI YN LI G G I A Q+ MS + P+V T+N
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431
Query: 192 ILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKG 251
++ LC G ++ A ++ + K +PD+ T+ ILI + + A+++LD M + G
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 252 CIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAE 311
PDV TYN L+NG+CK + ++ ++ M GC PN+ T NI+L S+C + +A
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 312 RLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPK-HGCTPNSLSYNPVLHG 370
LL EM K +P VTF LI+ C+ G L A + KM + + + ++ +YN ++H
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHA 611
Query: 371 FCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPV 430
F ++ + A + + MV R PD TY ++ CK G V++ + L ++ P
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPS 671
Query: 431 LITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTI 467
L T VI+ L + +A ++ M KGL P+ +
Sbjct: 672 LTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 197/393 (50%), Gaps = 3/393 (0%)
Query: 188 TYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVI--TYTILIEATCKESGVGQAMKLLD 245
TY +++ L GK AME + + + ++ Y ++ ++ V +A+ + +
Sbjct: 42 TYRSVIEKLGYYGKFE-AMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFE 100
Query: 246 EMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTG 305
M C P V +YN +++ + G D+A K M G P+V + I ++S C T
Sbjct: 101 RMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTS 160
Query: 306 RWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYN 365
R A RLL M +GC +VV + ++ + ++ KM G + ++N
Sbjct: 161 RPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFN 220
Query: 366 PVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNK 425
+L CK+ + + L+ ++ RG P++ TYN + LC+ G++D AV ++ L +
Sbjct: 221 KLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ 280
Query: 426 HCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEA 485
P +ITYN +I GL K K ++A L +M +GL+PD+ TY++L+ G + G V A
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA 340
Query: 486 IKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEG 545
++ D G P+ TY S++ GLC +T RA+ + + + + KP Y LI+G
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 546 IAYEGLAKEALDLLNQLCSRGVVKKSSAEQVAV 578
++ +G+ EA L N++ +G++ + + V
Sbjct: 401 LSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 141/300 (47%), Gaps = 12/300 (4%)
Query: 47 ETLSFNVKMKHGEAFVQGHLNNGHISSGMENSSLNFEDFESNNHLRRLVRNGELEEGFKF 106
+ +FN+ + HG + N I M ++ ++ + + N+ L L + + E+ +
Sbjct: 460 DIFTFNI-LIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMET 518
Query: 107 LESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCR 166
++MV G P++ L+ C+ K +A ++E +++ PD +T+ LI G+C+
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCK 578
Query: 167 LGEIDNALQVLERMS----VAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVI 222
G++D A + +M V+ TYN I+ + + +A ++ + +++ PD
Sbjct: 579 NGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGY 638
Query: 223 TYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDM 282
TY ++++ CK V K L EM G IP + T ++N +C E R+ EA ++ M
Sbjct: 639 TYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRM 698
Query: 283 PSYGCQPNVITHNIILRSMCSTG-RWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGL 341
G P + ++C + + A +L+ E +LK + + +L + L K L
Sbjct: 699 VQKGLVPEAVN------TICDVDKKEVAAPKLVLEDLLKKSCITYYAYELLFDGLRDKRL 752
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 415 AVEILNQLSN----KHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTK-GLKPDTITY 469
A+E+ N + KH L TY +VI+ L GK E ++L +MR G Y
Sbjct: 23 ALEMFNSMRKEVGFKH---TLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVY 79
Query: 470 SSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVT 529
+ R+GKV EA+ +F ++ P V +YN+IM L + +A + M
Sbjct: 80 VGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRD 139
Query: 530 RSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRG 566
R P ++TI ++ AL LLN + S+G
Sbjct: 140 RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG 176
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 278 bits (710), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 140/497 (28%), Positives = 270/497 (54%), Gaps = 3/497 (0%)
Query: 86 ESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIV 145
E N L + + + E E M G D+ + I FC+ + A V+ +
Sbjct: 85 EFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKM 144
Query: 146 EDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKL 202
G PD++T + L++GYC I +A+ ++++M PD T+ T++ L K
Sbjct: 145 MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKA 204
Query: 203 NLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVL 262
+ A+ ++ + +++ C PD++TY ++ CK + A+ LL +M DVV YN +
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 264
Query: 263 VNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGC 322
++G+CK +D+A+ +M + G +P+V T++ ++ +C+ GRW DA RLL++M+ +
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 323 SPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIE 382
+P+VVTF+ LI+ ++G L A + ++M K P+ +Y+ +++GFC ++D A
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 383 YLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLS 442
E+M+S+ C+P++VTY+TL+ CK +V+ +E+ ++S + +TY T+I G
Sbjct: 385 MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444
Query: 443 KVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVI 502
+ + A + ++M + G+ P+ +TY+ L+ GL + GK+ +A+ +F L+R + P++
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504
Query: 503 TYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQL 562
TYN ++ G+CKA + ++ ++ + P Y +I G +G +EA LL ++
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Query: 563 CSRGVVKKSSAEQVAVK 579
G + S ++
Sbjct: 565 KEDGPLPNSGTYNTLIR 581
Score = 274 bits (700), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/488 (30%), Positives = 253/488 (51%), Gaps = 3/488 (0%)
Query: 96 RNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVI 155
R +L L M+ G PDI+ +SL+ G+C + A +++ + + G PD
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189
Query: 156 TYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQ 212
T+ LI G + A+ ++++M PD+VTY T++ LC G ++LA+ +L K
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM 249
Query: 213 LEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRL 272
+ + DV+ Y +I+ CK + A+ L EM NKG PDV TY+ L++ +C GR
Sbjct: 250 EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 309
Query: 273 DEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNIL 332
+A + L+DM PNV+T + ++ + G+ ++AE+L EM+ + P + T++ L
Sbjct: 310 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Query: 333 INFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGC 392
IN C L A + E M C PN ++Y+ ++ GFCK K+++ +E M RG
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Query: 393 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMK 452
+ VTY TL+ + D A + Q+ + P ++TYN ++DGL K GK +AM
Sbjct: 430 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 489
Query: 453 LLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLC 512
+ E ++ ++PD TY+ ++ G+ + GKV++ +LF +L GV PNVI YN+++ G C
Sbjct: 490 VFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFC 549
Query: 513 KARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSS 572
+ A +L M P TY LI +G + + +L+ ++ S G +S
Sbjct: 550 RKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 609
Query: 573 AEQVAVKM 580
+ M
Sbjct: 610 TIGLVTNM 617
Score = 243 bits (619), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 138/446 (30%), Positives = 231/446 (51%), Gaps = 3/446 (0%)
Query: 83 EDFESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVM 142
+ F + L + + E ++ MV G PD++ +++ G CK G A ++
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 143 EIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERMS---VAPDVVTYNTILRTLCDS 199
+ +E DV+ YN +I G C+ +D+AL + M + PDV TY++++ LC+
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306
Query: 200 GKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTY 259
G+ + A +L +E++ P+V+T++ LI+A KE + +A KL DEM + PD+ TY
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366
Query: 260 NVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVL 319
+ L+NG C RLDEA M S C PNV+T++ +++ C R + L EM
Sbjct: 367 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ 426
Query: 320 KGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDR 379
+G + VT+ LI+ + A + ++M G PN L+YN +L G CK K+ +
Sbjct: 427 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 486
Query: 380 AIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVID 439
A+ E + PDI TYN ++ +CK GKV+ E+ LS K SP +I YNT+I
Sbjct: 487 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMIS 546
Query: 440 GLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRP 499
G + G E+A LL++M+ G P++ TY++L+ R+G + + +L ++ G
Sbjct: 547 GFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAG 606
Query: 500 NVITYNSIMLGLCKARQTYRAIDILA 525
+ T + L R +D+L+
Sbjct: 607 DASTIGLVTNMLHDGRLDKSFLDMLS 632
Score = 223 bits (567), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 212/402 (52%), Gaps = 3/402 (0%)
Query: 169 EIDNALQVLERMSVA---PDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYT 225
++D+A+ + M + P +V +N +L + K L + + + D+ TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 226 ILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSY 285
I I C+ S + A+ +L +M G PD+VT + L+NG C R+ +A+ ++ M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 286 GCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRA 345
G +P+ T ++ + + +A L+ +MV +GC P +VT+ ++N LC++G + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 346 IDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTA 405
+ +L+KM K + + YN ++ G CK K MD A+ M ++G PD+ TY++L++
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 406 LCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPD 465
LC G+ A +L+ + + +P ++T++ +ID K GK +A KL +EM + + PD
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 466 TITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILA 525
TYSSL+ G ++DEA +F + PNV+TY++++ G CKA++ +++
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 526 DMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
+M R TYT LI G A + Q+ S GV
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Score = 206 bits (523), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 204/381 (53%), Gaps = 1/381 (0%)
Query: 189 YNTILRT-LCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEM 247
Y ILR L D K++ A+++ ++ +P ++ + L+ A K + + L ++M
Sbjct: 50 YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 248 RNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRW 307
+ G D+ TY++ +N C+ +L A+ L M G +P+++T + +L C + R
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 308 MDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPV 367
DA L+ +MV G P TF LI+ L A+ ++++M + GC P+ ++Y V
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 368 LHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHC 427
++G CK +D A+ L+ M D+V YNT++ LCK +D A+ + ++ NK
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Query: 428 SPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIK 487
P + TY+++I L G+ A +LL +M + + P+ +T+S+L+ +EGK+ EA K
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 349
Query: 488 LFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIA 547
L+ ++ + + P++ TY+S++ G C + A + M+++ C P TY+ LI+G
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
Query: 548 YEGLAKEALDLLNQLCSRGVV 568
+E ++L ++ RG+V
Sbjct: 410 KAKRVEEGMELFREMSQRGLV 430
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 187/353 (52%), Gaps = 5/353 (1%)
Query: 65 HLNNG-HISSGMENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCT 123
H+++ ++ + M+N + + F ++ + L G + + L M+ P+++ +
Sbjct: 273 HMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFS 332
Query: 124 SLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM--- 180
+LI F K GK +A ++ + + PD+ TY+ LI+G+C +D A + E M
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 181 SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQA 240
P+VVTY+T+++ C + ++ ME+ + ++ + +TYT LI + A
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 452
Query: 241 MKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRS 300
+ +M + G P+++TYN+L++G+CK G+L +A+ + +P++ T+NI++
Sbjct: 453 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 512
Query: 301 MCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPN 360
MC G+ D L + LKG SP+V+ +N +I+ CRKG A +L+KM + G PN
Sbjct: 513 MCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPN 572
Query: 361 SLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVD 413
S +YN ++ ++ + + E ++ M S G D T L+T + DG++D
Sbjct: 573 SGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLD 624
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 77/152 (50%), Gaps = 10/152 (6%)
Query: 61 FVQGHLNNGHISSGM------ENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYHG 114
+ G NG ++ M + S++ + + N + + + G++E+G++ ++ G
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 115 DIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNAL 174
P++I ++I GFC+ G +A +++ +++ G +P+ TYN LI R G+ + +
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 593
Query: 175 QVLERM---SVAPDVVTYNTILRTLCDSGKLN 203
++++ M A D T + L D G+L+
Sbjct: 594 ELIKEMRSCGFAGDASTIGLVTNMLHD-GRLD 624
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 277 bits (709), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 152/490 (31%), Positives = 266/490 (54%), Gaps = 3/490 (0%)
Query: 94 LVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPD 153
+ R + F + + +G +I +I FC+ KT A V+ V G PD
Sbjct: 98 IARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPD 157
Query: 154 VITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLH 210
T+N LI G G++ A+ +++RM PDVVTYN+I+ +C SG +LA+++L
Sbjct: 158 TTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLR 217
Query: 211 KQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEG 270
K E+ DV TY+ +I++ C++ + A+ L EM KG VVTYN LV G+CK G
Sbjct: 218 KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277
Query: 271 RLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFN 330
+ ++ L DM S PNVIT N++L G+ +A L EM+ +G SP+++T+N
Sbjct: 278 KWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYN 337
Query: 331 ILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSR 390
L++ C + L A ++L+ M ++ C+P+ +++ ++ G+C K++D ++ + R
Sbjct: 338 TLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR 397
Query: 391 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQA 450
G + VTY+ L+ C+ GK+ +A E+ ++ + P ++TY ++DGL GK E+A
Sbjct: 398 GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
Query: 451 MKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLG 510
+++ E+++ + + Y++++ G+ + GKV++A LF L GV+PNV+TY ++ G
Sbjct: 458 LEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 517
Query: 511 LCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKK 570
LCK A +L M P + TY LI +G + L+ ++ S G
Sbjct: 518 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
Query: 571 SSAEQVAVKM 580
+S+ ++ + M
Sbjct: 578 ASSIKMVIDM 587
Score = 273 bits (697), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 278/503 (55%), Gaps = 14/503 (2%)
Query: 71 ISSGMENSSLNFEDFESNN-HLRRLVRNG----ELEEGFKFLESMVYHGDIPDIIPCTSL 125
ISS + +F + N R +R+G + ++ + M+ +P ++ +
Sbjct: 35 ISSFFSSCERDFSSISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFS-- 92
Query: 126 IRGFCKVGKTRKATRVMEI---VEDSGAVPDVITYNVLISGYCRLGEIDNALQVL---ER 179
R F + +T++ V++ +E +G ++ T N++I+ +CR + A VL +
Sbjct: 93 -RFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMK 151
Query: 180 MSVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQ 239
+ PD T+NT+++ L GK++ A+ ++ + +E C PDV+TY ++ C+
Sbjct: 152 LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL 211
Query: 240 AMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILR 299
A+ LL +M + DV TY+ +++ +C++G +D AI +M + G + +V+T+N ++R
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 300 SMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTP 359
+C G+W D LL +MV + P+V+TFN+L++ ++G L A ++ ++M G +P
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 360 NSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 419
N ++YN ++ G+C + ++ A L++MV C PDIVT+ +L+ C +VD +++
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Query: 420 NQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSRE 479
+S + +TY+ ++ G + GK + A +L +EM + G+ PD +TY L+ GL
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Query: 480 GKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATY 539
GK+++A+++F DL++ + ++ Y +I+ G+CK + A ++ + + KP TY
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Query: 540 TILIEGIAYEGLAKEALDLLNQL 562
T++I G+ +G EA LL ++
Sbjct: 512 TVMISGLCKKGSLSEANILLRKM 534
Score = 257 bits (657), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/447 (31%), Positives = 241/447 (53%), Gaps = 3/447 (0%)
Query: 117 PDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQV 176
PD +LI+G GK +A +++ + ++G PDV+TYN +++G CR G+ AL +
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 177 LERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCK 233
L +M +V DV TY+TI+ +LC G ++ A+ + + K V+TY L+ CK
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 234 ESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVIT 293
LL +M ++ +P+V+T+NVL++ KEG+L EA + +M + G PN+IT
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 294 HNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMP 353
+N ++ C R +A +L MV CSP +VTF LI C + + + +
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 354 KHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVD 413
K G N+++Y+ ++ GFC+ K+ A E + MVS G PD++TY LL LC +GK++
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 414 VAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLV 473
A+EI L ++ Y T+I+G+ K GK E A L + KG+KP+ +TY+ ++
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 474 GGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCK 533
GL ++G + EA L +E G PN TYN+++ + + ++ +M +
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575
Query: 534 PTEATYTILIEGIAYEGLAKEALDLLN 560
++ ++I+ + L K LD+L+
Sbjct: 576 ADASSIKMVIDMLLSGELDKSFLDMLS 602
Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 180/341 (52%)
Query: 239 QAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIIL 298
A+ L EM +P +V ++ + I + + + + F + G N+ T NI++
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 299 RSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCT 358
C + A +L +++ G P TFN LI L +G + A+ ++++M ++GC
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 359 PNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI 418
P+ ++YN +++G C+ A++ L M R D+ TY+T++ +LC+DG +D A+ +
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 419 LNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSR 478
++ K ++TYN+++ GL K GK LL++M ++ + P+ IT++ L+ +
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 479 EGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEAT 538
EGK+ EA +L+ ++ G+ PN+ITYN++M G C + A ++L MV C P T
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 539 YTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSSAEQVAVK 579
+T LI+G + + + + RG+V + + V+
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 187/364 (51%)
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
A+ + + + P ++ ++ A + + ++ G ++ T N+++N
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 265 GICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSP 324
C+ + A L + G +P+ T N +++ + G+ +A L+ MV GC P
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 325 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYL 384
VVT+N ++N +CR G A+D+L KM + + +Y+ ++ C++ +D AI
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 385 EIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKV 444
+ M ++G +VTYN+L+ LCK GK + +L + ++ P +IT+N ++D K
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 445 GKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITY 504
GK ++A +L +EM T+G+ P+ ITY++L+ G + ++ EA + + R P+++T+
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 505 NSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCS 564
S++ G C ++ + + ++ R TY+IL++G G K A +L ++ S
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 565 RGVV 568
GV+
Sbjct: 432 HGVL 435
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 55 MKHGEAFVQGHLNNGHISSGMENSSLNFEDFESNNH----------LRRLVRNGELEEGF 104
M +G + G +NG + +E FED + + + + + G++E+ +
Sbjct: 439 MTYG-ILLDGLCDNGKLEKALEI----FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 105 KFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGY 164
S+ G P+++ T +I G CK G +A ++ +E+ G P+ TYN LI +
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 165 CRLGEIDNALQVLERM 180
R G++ + +++E M
Sbjct: 554 LRDGDLTASAKLIEEM 569
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 268 bits (686), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 149/477 (31%), Positives = 254/477 (53%), Gaps = 4/477 (0%)
Query: 94 LVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIV-EDSGAVP 152
L +NG E F+ ++ G + D TSL+ GFC+ R A +V +++ ++ P
Sbjct: 205 LCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAP 264
Query: 153 DVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVL 209
+ ++Y++LI G C +G ++ A + ++M P TY +++ LCD G ++ A +
Sbjct: 265 NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324
Query: 210 HKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKE 269
+ + + C P+V TYT+LI+ C++ + +A + +M P V+TYN L+NG CK+
Sbjct: 325 DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKD 384
Query: 270 GRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTF 329
GR+ A + L M C+PNV T N ++ +C G+ A LL M+ G SP +V++
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 330 NILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVS 389
N+LI+ LCR+G + A +L M P+ L++ +++ FCK+ K D A +L +M+
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Query: 390 RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQ 449
+G D VT TL+ +CK GK A+ IL L + N ++D LSK K ++
Sbjct: 505 KGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKE 564
Query: 450 AMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIML 509
+ +L ++ GL P +TY++LV GL R G + + ++ ++ G PNV Y I+
Sbjct: 565 ELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIIN 624
Query: 510 GLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRG 566
GLC+ + A +L+ M P TYT++++G G AL+ + + RG
Sbjct: 625 GLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Score = 223 bits (567), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 149/494 (30%), Positives = 236/494 (47%), Gaps = 27/494 (5%)
Query: 98 GELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITY 157
G LEE F + M G P T LI+ C G KA + + + G P+V TY
Sbjct: 280 GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTY 339
Query: 158 NVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLE 214
VLI G CR G+I+ A V +M + P V+TYN ++ C G++ A E+L +
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399
Query: 215 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDE 274
+ C P+V T+ L+E C+ +A+ LL M + G PD+V+YNVL++G+C+EG ++
Sbjct: 400 RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNT 459
Query: 275 AIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILIN 334
A K L+ M + +P+ +T I+ + C G+ A L M+ KG S VT LI+
Sbjct: 460 AYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519
Query: 335 FLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYP 394
+C+ G A+ ILE + K S N +L K K+ + L + G P
Sbjct: 520 GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVP 579
Query: 395 DIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLL 454
+VTY TL+ L + G + + IL + C P + Y +I+GL + G+ E+A KLL
Sbjct: 580 SVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL 639
Query: 455 EEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKA 514
M+ G+ P+ +TY+ +V G GK+D A++ + G N Y+S++ G +
Sbjct: 640 SAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLS 699
Query: 515 RQTYRAID-----ILADMVTRSCKP----------------TEATYTILIEGIAYEGLAK 553
+ + ID ++D+ R P L+ + EG
Sbjct: 700 Q---KGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTD 756
Query: 554 EALDLLNQLCSRGV 567
E+ DL+ + RGV
Sbjct: 757 ESNDLVQNVLERGV 770
Score = 215 bits (548), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 213/384 (55%), Gaps = 1/384 (0%)
Query: 186 VVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLD 245
++ Y TI+ LC +G A + K L+ D T L+ C+ + A+K+ D
Sbjct: 195 MIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFD 254
Query: 246 EMRNK-GCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCST 304
M + C P+ V+Y++L++G+C+ GRL+EA + M GCQP+ T+ ++++++C
Sbjct: 255 VMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDR 314
Query: 305 GRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSY 364
G A L EM+ +GC P+V T+ +LI+ LCR G + A + KM K P+ ++Y
Sbjct: 315 GLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITY 374
Query: 365 NPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSN 424
N +++G+CK+ ++ A E L +M R C P++ T+N L+ LC+ GK AV +L ++ +
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD 434
Query: 425 KHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDE 484
SP +++YN +IDGL + G A KLL M ++PD +T+++++ ++GK D
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADV 494
Query: 485 AIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIE 544
A + R G+ + +T +++ G+CK +T A+ IL +V T + ++++
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILD 554
Query: 545 GIAYEGLAKEALDLLNQLCSRGVV 568
++ KE L +L ++ G+V
Sbjct: 555 MLSKGCKVKEELAMLGKINKLGLV 578
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 209/396 (52%), Gaps = 7/396 (1%)
Query: 189 YNTILRTLCDSGKLNLAM--EVLHKQLEKECYP-DVITYTILIEATCKESGVGQAMKLLD 245
Y+++L +L KL+L V ++++E + + +I Y ++ A CK A +
Sbjct: 163 YSSLLMSL---AKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMS 219
Query: 246 EMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMP-SYGCQPNVITHNIILRSMCST 304
++ G + D L+ G C+ L +A+K + M C PN ++++I++ +C
Sbjct: 220 KILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEV 279
Query: 305 GRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSY 364
GR +A L +M KGC PS T+ +LI LC +GL+ +A ++ ++M GC PN +Y
Sbjct: 280 GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTY 339
Query: 365 NPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSN 424
++ G C++ K++ A MV +P ++TYN L+ CKDG+V A E+L +
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399
Query: 425 KHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDE 484
+ C P + T+N +++GL +VGK +A+ LL+ M GL PD ++Y+ L+ GL REG ++
Sbjct: 400 RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNT 459
Query: 485 AIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIE 544
A KL + + P+ +T+ +I+ CK + A L M+ + E T T LI+
Sbjct: 460 AYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519
Query: 545 GIAYEGLAKEALDLLNQLCSRGVVKKSSAEQVAVKM 580
G+ G ++AL +L L ++ + V + M
Sbjct: 520 GVCKVGKTRDALFILETLVKMRILTTPHSLNVILDM 555
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 137/500 (27%), Positives = 246/500 (49%), Gaps = 23/500 (4%)
Query: 94 LVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPD 153
L R+G++EE MV P +I +LI G+CK G+ A ++ ++E P+
Sbjct: 346 LCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPN 405
Query: 154 VITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLH 210
V T+N L+ G CR+G+ A+ +L+RM ++PD+V+YN ++ LC G +N A ++L
Sbjct: 406 VRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLS 465
Query: 211 KQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEG 270
+ PD +T+T +I A CK+ A L M KG D VT L++G+CK G
Sbjct: 466 SMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVG 525
Query: 271 RLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFN 330
+ +A+ L + + N+IL + + + +L ++ G PSVVT+
Sbjct: 526 KTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYT 585
Query: 331 ILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSR 390
L++ L R G + + ILE M GC PN Y +++G C+ +++ A + L M
Sbjct: 586 TLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDS 645
Query: 391 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDG--LSKVGKTE 448
G P+ VTY ++ +GK+D A+E + + + Y++++ G LS+ G
Sbjct: 646 GVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDN 705
Query: 449 QAMKLLEEMRTKGLKPDT----ITYSSLVGG------------LSREGKVDEAIKLFHDL 492
+ ++ + P+ I+ +GG L +EG+ DE+ L ++
Sbjct: 706 SEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNV 765
Query: 493 ERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLA 552
GV + IM C ++ + ++++ ++ P+ ++ ++I+G+ EG A
Sbjct: 766 LERGVFLEK-AMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDA 824
Query: 553 KEALDLLNQ-LCSRGVVKKS 571
+ A +L+ + L S GVV+KS
Sbjct: 825 ERARELVMELLTSNGVVEKS 844
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 150/314 (47%), Gaps = 36/314 (11%)
Query: 285 YGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKG---- 340
+G + N ++ +L S+ A M G ++ + ++N LC+ G
Sbjct: 154 FGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEA 213
Query: 341 -----------------------LLG--------RAIDILEKMPKH-GCTPNSLSYNPVL 368
LLG A+ + + M K C PNS+SY+ ++
Sbjct: 214 AEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILI 273
Query: 369 HGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCS 428
HG C+ +++ A + M +GC P TY L+ ALC G +D A + +++ + C
Sbjct: 274 HGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCK 333
Query: 429 PVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKL 488
P + TY +IDGL + GK E+A + +M + P ITY++L+ G ++G+V A +L
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFEL 393
Query: 489 FHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAY 548
+E+ +PNV T+N +M GLC+ + Y+A+ +L M+ P +Y +LI+G+
Sbjct: 394 LTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCR 453
Query: 549 EGLAKEALDLLNQL 562
EG A LL+ +
Sbjct: 454 EGHMNTAYKLLSSM 467
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 207/451 (45%), Gaps = 33/451 (7%)
Query: 70 HISSGMENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGF 129
H+ M ++ L+ + N + L R G + +K L SM PD + T++I F
Sbjct: 427 HLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAF 486
Query: 130 CKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLE---RMSVAPDV 186
CK GK A+ + ++ G D +T LI G C++G+ +AL +LE +M +
Sbjct: 487 CKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTP 546
Query: 187 VTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDE 246
+ N IL L K+ + +L K + P V+TYT L++ + + + ++L+
Sbjct: 547 HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILEL 606
Query: 247 MRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGR 306
M+ GC+P+V Y +++NG+C+ GR++EA K L+ M G PN +T+ ++++ + G+
Sbjct: 607 MKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGK 666
Query: 307 WMDAERLLAEMVLKGCSPSVVTFNILIN--FLCRKGL--------------------LGR 344
A + MV +G + ++ L+ L +KG+ +
Sbjct: 667 LDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINE 726
Query: 345 AIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLT 404
I ++E++ GC + ++ CKE + D + + ++ ++ RG + + + ++
Sbjct: 727 LISVVEQL--GGCISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVFLE-KAMDIIME 781
Query: 405 ALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKG--- 461
+ C K +E++ + P ++ VI GL K G E+A +L+ E+ T
Sbjct: 782 SYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVV 841
Query: 462 LKPDTITYSSLVGGLSREGKVDEAIKLFHDL 492
K +TY + G E I L L
Sbjct: 842 EKSGVLTYVECLMEGDETGDCSEVIDLVDQL 872
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 267 bits (682), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/516 (28%), Positives = 269/516 (52%), Gaps = 37/516 (7%)
Query: 94 LVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPD 153
L + L+E + E + + +P ++I G+ GK +A ++E G++P
Sbjct: 283 LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS 342
Query: 154 VITYNVLISGYCRLGEIDNALQVLERM--SVAPDVVTYNTILRTLCDSGKLNLAMEVLHK 211
VI YN +++ ++G++D AL+V E M AP++ TYN ++ LC +GKL+ A E+
Sbjct: 343 VIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDS 402
Query: 212 QLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGR 271
+ +P+V T I+++ CK + +A + +EM K C PD +T+ L++G+ K GR
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 272 LDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVV---- 327
+D+A K M C+ N I + ++++ + GR D ++ +M+ + CSP +
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 328 -------------------------------TFNILINFLCRKGLLGRAIDILEKMPKHG 356
+++ILI+ L + G ++ M + G
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 357 CTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 416
C ++ +YN V+ GFCK K+++A + LE M ++G P +VTY +++ L K ++D A
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642
Query: 417 EILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGL 476
+ + +K ++ Y+++IDG KVG+ ++A +LEE+ KGL P+ T++SL+ L
Sbjct: 643 MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDAL 702
Query: 477 SREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTE 536
+ +++EA+ F ++ L PN +TY ++ GLCK R+ +A +M + KP+
Sbjct: 703 VKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPST 762
Query: 537 ATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSS 572
+YT +I G+A G EA L ++ + G V S+
Sbjct: 763 ISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSA 798
Score = 229 bits (585), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 134/465 (28%), Positives = 237/465 (50%), Gaps = 4/465 (0%)
Query: 106 FLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYC 165
+ M G P + T+LIRGF K G+ A +++ ++ S D++ YNV I +
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249
Query: 166 RLGEIDNALQV---LERMSVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVI 222
++G++D A + +E + PD VTY +++ LC + +L+ A+E+ + P
Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309
Query: 223 TYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDM 282
Y +I +A LL+ R KG IP V+ YN ++ + K G++DEA+K +M
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 283 PSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLL 342
PN+ T+NI++ +C G+ A L M G P+V T NI+++ LC+ L
Sbjct: 370 KK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 343 GRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTL 402
A + E+M CTP+ +++ ++ G K ++D A + E M+ C + + Y +L
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 403 LTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGL 462
+ G+ + +I + N++CSP L NT +D + K G+ E+ + EE++ +
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 463 KPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAID 522
PD +YS L+ GL + G +E +LF+ ++ G + YN ++ G CK + +A
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 523 ILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
+L +M T+ +PT TY +I+G+A EA L + S+ +
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Score = 213 bits (541), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 229/456 (50%), Gaps = 3/456 (0%)
Query: 94 LVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPD 153
L R G+L+ F+ +SM G P++ ++ CK K +A + E ++ PD
Sbjct: 387 LCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPD 446
Query: 154 VITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLH 210
IT+ LI G ++G +D+A +V E+M + + Y ++++ + G+ ++
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 211 KQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEG 270
+ + C PD+ ++ K + + +E++ + +PD +Y++L++G+ K G
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566
Query: 271 RLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFN 330
+E + M GC + +NI++ C G+ A +LL EM KG P+VVT+
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626
Query: 331 ILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSR 390
+I+ L + L A + E+ N + Y+ ++ GF K ++D A LE ++ +
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Query: 391 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQA 450
G P++ T+N+LL AL K +++ A+ + C+P +TY +I+GL KV K +A
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 451 MKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLG 510
+EM+ +G+KP TI+Y++++ GL++ G + EA LF + G P+ YN+++ G
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 511 LCKARQTYRAIDILADMVTRSCKPTEATYTILIEGI 546
L + A + + R T +L++ +
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/416 (29%), Positives = 203/416 (48%), Gaps = 8/416 (1%)
Query: 156 TYNVLISGYCRLGEIDNALQVLERMSVA---PDVVTYNTILRTLCDSGKLNLAMEVLHKQ 212
+YN L+ R D Q+L MSVA P V T ++ + KL +V+
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 213 LEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRL 272
+ + P YT LI A + + L +M+ G P V + L+ G KEGR+
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 273 DEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNIL 332
D A+ L++M S +++ +N+ + S G+ A + E+ G P VT+ +
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 333 INFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGC 392
I LC+ L A+++ E + K+ P + +YN ++ G+ K D A LE ++G
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 393 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMK 452
P ++ YN +LT L K GKVD A+++ ++ K +P L TYN +ID L + GK + A +
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFE 398
Query: 453 LLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLC 512
L + M+ GL P+ T + +V L + K+DEA +F +++ P+ IT+ S++ GL
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458
Query: 513 KARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEA----LDLLNQLCS 564
K + A + M+ C+ YT LI+ G ++ D++NQ CS
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCS 514
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 206/449 (45%), Gaps = 54/449 (12%)
Query: 93 RLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVP 152
RL ++ +L+E E M Y PD I SLI G KVG+ A +V E + DS
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 153 DVITYNVLISGYCRLGEIDNALQVLERM-------------------------------- 180
+ I Y LI + G ++ ++ + M
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 181 ------SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKE 234
PD +Y+ ++ L +G N E+ + E+ C D Y I+I+ CK
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 235 SGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITH 294
V +A +LL+EM+ KG P VVTY +++G+ K RLDEA + S + NV+ +
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660
Query: 295 NIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPK 354
+ ++ GR +A +L E++ KG +P++ T+N L++ L + + A+ + M +
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE 720
Query: 355 HGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDV 414
CTPN ++Y +++G CK +K ++A + + M +G P ++Y T+++ L K G +
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE 780
Query: 415 AVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGL------------ 462
A + ++ P YN +I+GLS + A L EE R +GL
Sbjct: 781 AGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLD 840
Query: 463 ---KPDTITYSSLVGGLSRE-GKVDEAIK 487
K D + +++VG + RE GK A +
Sbjct: 841 TLHKNDCLEQAAIVGAVLRETGKARHAAR 869
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 181/425 (42%), Gaps = 36/425 (8%)
Query: 172 NALQVLERMSVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEAT 231
+A L +S P +LR L D + ++ E P+ +L+ A
Sbjct: 51 SAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMAR 110
Query: 232 CKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNV 291
C+ ++L EM G P V T +V G K +L E + M + +P
Sbjct: 111 CR--NFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAF 168
Query: 292 ITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEK 351
+ ++ + + L +M G P+V F LI ++G + A+ +L++
Sbjct: 169 SAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDE 228
Query: 352 MPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGK 411
M + + YN + F K K+D A ++ + + G PD VTY +++ LCK +
Sbjct: 229 MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANR 288
Query: 412 VDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSS 471
+D AVE+ L P YNT+I G GK ++A LLE R KG P I Y+
Sbjct: 289 LDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNC 348
Query: 472 LVGGLSREGKVDEAIKLFHD----------------------------------LERLGV 497
++ L + GKVDEA+K+F + +++ G+
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
Query: 498 RPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALD 557
PNV T N ++ LCK+++ A + +M + C P E T+ LI+G+ G +A
Sbjct: 409 FPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYK 468
Query: 558 LLNQL 562
+ ++
Sbjct: 469 VYEKM 473
Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 128/286 (44%), Gaps = 6/286 (2%)
Query: 284 SYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMV-LKGCSPSVVTFNILINFLCRKGLL 342
S+ QP + +LR + R ++ R L C S +N L+ + R
Sbjct: 60 SFKPQPEFVIG--VLRRLKDVNRAIEYFRWYERRTELPHCPES---YNSLLLVMARCRNF 114
Query: 343 GRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTL 402
IL +M G P+ + ++ G K K+ + +++M P Y TL
Sbjct: 115 DALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTL 174
Query: 403 LTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGL 462
+ A D+ + + Q+ P + + T+I G +K G+ + A+ LL+EM++ L
Sbjct: 175 IGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSL 234
Query: 463 KPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAID 522
D + Y+ + + GKVD A K FH++E G++P+ +TY S++ LCKA + A++
Sbjct: 235 DADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVE 294
Query: 523 ILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVV 568
+ + P Y +I G G EA LL + ++G +
Sbjct: 295 MFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI 340
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 6/128 (4%)
Query: 85 FESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEI 144
+ N+ L LV+ E+ E +SM P+ + LI G CKV K KA +
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQE 752
Query: 145 VEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERMSV---APDVVTYNTILRTLCDSGK 201
++ G P I+Y +ISG + G I A + +R PD YN ++ L +
Sbjct: 753 MQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNG-- 810
Query: 202 LNLAMEVL 209
N AM+
Sbjct: 811 -NRAMDAF 817
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 266 bits (680), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 257/449 (57%), Gaps = 10/449 (2%)
Query: 131 KVGKTR----KATRVMEIVED---SGAVPDVITYNVLISGYCRLGEIDNALQV---LERM 180
++ KTR K +++ D S P ++ +N L+S +L + D + + +E +
Sbjct: 55 RLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVL 114
Query: 181 SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQA 240
+ D+ T+N ++ C +++LA+ +L K L+ PD +T L+ C+ + V A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 241 MKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRS 300
+ L+D+M G PD+V YN +++ +CK R+++A F ++ G +PNV+T+ ++
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 301 MCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPN 360
+C++ RW DA RLL++M+ K +P+V+T++ L++ + G + A ++ E+M + P+
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 361 SLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 420
++Y+ +++G C ++D A + ++MVS+GC D+V+YNTL+ CK +V+ +++
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 421 QLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREG 480
++S + +TYNT+I G + G ++A + +M G+ PD TY+ L+GGL G
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Query: 481 KVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYT 540
++++A+ +F D+++ + +++TY +++ G+CK + A + + + KP TYT
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474
Query: 541 ILIEGIAYEGLAKEALDLLNQLCSRGVVK 569
++ G+ +GL E L ++ G++K
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEGLMK 503
Score = 252 bits (643), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 133/421 (31%), Positives = 229/421 (54%), Gaps = 3/421 (0%)
Query: 95 VRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDV 154
+R+ +L + MV P I+ L+ K+ K + + +E G D+
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120
Query: 155 ITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHK 211
T+N++I+ +C ++ AL +L +M PD VT +++ C +++ A+ ++ K
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 212 QLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGR 271
+E PD++ Y +I++ CK V A E+ KG P+VVTY LVNG+C R
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 272 LDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNI 331
+A + L+DM PNVIT++ +L + G+ ++A+ L EMV P +VT++
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 332 LINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRG 391
LIN LC + A + + M GC + +SYN +++GFCK K+++ ++ M RG
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 392 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAM 451
+ VTYNTL+ + G VD A E +Q+ SP + TYN ++ GL G+ E+A+
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 452 KLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGL 511
+ E+M+ + + D +TY++++ G+ + GKV+EA LF L G++P+++TY ++M GL
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Query: 512 C 512
C
Sbjct: 481 C 481
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 209/386 (54%), Gaps = 3/386 (0%)
Query: 118 DIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVL 177
D+ +I FC + A ++ + G PD +T L++G+CR + +A+ ++
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 178 ERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKE 234
++M PD+V YN I+ +LC + ++N A + + K P+V+TYT L+ C
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 235 SGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITH 294
S A +LL +M K P+V+TY+ L++ K G++ EA + +M P+++T+
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 295 NIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPK 354
+ ++ +C R +A ++ MV KGC VV++N LIN C+ + + + +M +
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 355 HGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDV 414
G N+++YN ++ GF + +D+A E+ M G PDI TYN LL LC +G+++
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 415 AVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVG 474
A+ I + + ++TY TVI G+ K GK E+A L + KGLKPD +TY++++
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478
Query: 475 GLSREGKVDEAIKLFHDLERLGVRPN 500
GL +G + E L+ +++ G+ N
Sbjct: 479 GLCTKGLLHEVEALYTKMKQEGLMKN 504
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 216/414 (52%), Gaps = 13/414 (3%)
Query: 103 GFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLIS 162
L M+ G PD + SL+ GFC+ + A +++ + + G PD++ YN +I
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 163 GYCRLGEIDNALQV---LERMSVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYP 219
C+ +++A +ER + P+VVTY ++ LC+S + + A +L ++K+ P
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 220 DVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFL 279
+VITY+ L++A K V +A +L +EM PD+VTY+ L+NG+C R+DEA +
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 280 NDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRK 339
+ M S GC +V+++N ++ C R D +L EM +G + VT+N LI +
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 340 GLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTY 399
G + +A + +M G +P+ +YN +L G C ++++A+ E M R DIVTY
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438
Query: 400 NTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRT 459
T++ +CK GKV+ A + LS K P ++TY T++ GL G + L +M+
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Query: 460 KGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCK 513
+GL + T S +G + + +L + G P+++ I G+CK
Sbjct: 499 EGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPSLL--KDIKSGVCK 542
Score = 195 bits (496), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 166/318 (52%), Gaps = 3/318 (0%)
Query: 96 RNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVI 155
R + + ++ MV G PDI+ ++I CK + A + +E G P+V+
Sbjct: 167 RRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVV 226
Query: 156 TYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQ 212
TY L++G C +A ++L M + P+V+TY+ +L +GK+ A E+ +
Sbjct: 227 TYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Query: 213 LEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRL 272
+ PD++TY+ LI C + +A ++ D M +KGC+ DVV+YN L+NG CK R+
Sbjct: 287 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 346
Query: 273 DEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNIL 332
++ +K +M G N +T+N +++ G A+ ++M G SP + T+NIL
Sbjct: 347 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Query: 333 INFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGC 392
+ LC G L +A+ I E M K + ++Y V+ G CK K++ A + +G
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Query: 393 YPDIVTYNTLLTALCKDG 410
PDIVTY T+++ LC G
Sbjct: 467 KPDIVTYTTMMSGLCTKG 484
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 164/304 (53%)
Query: 268 KEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVV 327
++ +L++AI +DM P+++ N +L ++ ++ L +M + G +
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 328 TFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIM 387
TFNI+IN C + A+ IL KM K G P+ ++ +++GFC+ ++ A+ ++ M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 388 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKT 447
V G PDIV YN ++ +LCK +V+ A + ++ K P ++TY +++GL +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 448 EQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSI 507
A +LL +M K + P+ ITYS+L+ + GKV EA +LF ++ R+ + P+++TY+S+
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 508 MLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
+ GLC + A + MV++ C +Y LI G ++ + L ++ RG+
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 568 VKKS 571
V +
Sbjct: 362 VSNT 365
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 171/348 (49%), Gaps = 11/348 (3%)
Query: 88 NNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
N + L + + + F F + + G P+++ T+L+ G C + A R++ +
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLE---RMSVAPDVVTYNTILRTLCDSGKLNL 204
P+VITY+ L+ + + G++ A ++ E RMS+ PD+VTY++++ LC +++
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
A ++ + K C DV++Y LI CK V MKL EM +G + + VTYN L+
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373
Query: 265 GICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSP 324
G + G +D+A +F + M +G P++ T+NI+L +C G A + +M +
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 325 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYL 384
+VT+ +I +C+ G + A + + G P+ ++Y ++ G C + +
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 385 EIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLI 432
M G + T + DG + ++ E++ ++ + +P L+
Sbjct: 494 TKMKQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPSLL 533
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 149/287 (51%), Gaps = 13/287 (4%)
Query: 91 LRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGA 150
L V+NG++ E + E MV PDI+ +SLI G C + +A ++ +++ G
Sbjct: 267 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 326
Query: 151 VPDVITYNVLISGYCRLGEIDNALQVLERMS---VAPDVVTYNTILRTLCDSGKLNLAME 207
+ DV++YN LI+G+C+ +++ +++ MS + + VTYNT+++ +G ++ A E
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 208 VLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGIC 267
+ PD+ TY IL+ C + +A+ + ++M+ + D+VTY ++ G+C
Sbjct: 387 FFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMC 446
Query: 268 KEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVV 327
K G+++EA + G +P+++T+ ++ +C+ G + E L +M +G +
Sbjct: 447 KTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDC 506
Query: 328 TFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKE 374
T + G + + ++++KM G P+ L + G CK+
Sbjct: 507 TLS--------DGDITLSAELIKKMLSCGYAPSLL--KDIKSGVCKK 543
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 265 bits (678), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 154/478 (32%), Positives = 243/478 (50%), Gaps = 4/478 (0%)
Query: 94 LVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPD 153
L+ G LEE + M P C L+ F K+GKT R + + +GA P
Sbjct: 202 LIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPT 261
Query: 154 VITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLH 210
V TYN++I C+ G+++ A + E M + PD VTYN+++ G+L+ +
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321
Query: 211 KQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEG 270
+ + C PDVITY LI CK + ++ EM+ G P+VV+Y+ LV+ CKEG
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 381
Query: 271 RLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFN 330
+ +AIKF DM G PN T+ ++ + C G DA RL EM+ G +VVT+
Sbjct: 382 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 441
Query: 331 ILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSR 390
LI+ LC + A ++ KM G PN SYN ++HGF K K MDRA+E L + R
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501
Query: 391 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQA 450
G PD++ Y T + LC K++ A ++N++ + Y T++D K G +
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 561
Query: 451 MKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLER-LGVRPNVITYNSIML 509
+ LL+EM+ ++ +T+ L+ GL + V +A+ F+ + G++ N + +++
Sbjct: 562 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMID 621
Query: 510 GLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
GLCK Q A + MV + P YT L++G +G EAL L +++ G+
Sbjct: 622 GLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679
Score = 233 bits (595), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 144/514 (28%), Positives = 246/514 (47%), Gaps = 39/514 (7%)
Query: 88 NNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
N L R + G+ ++ +F + M+ G P + +I CK G A + E ++
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLERMS---VAPDVVTYNTILRTLCDSGKLNL 204
G VPD +TYN +I G+ ++G +D+ + E M PDV+TYN ++ C GKL +
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
+E + P+V++Y+ L++A CKE + QA+K +MR G +P+ TY L++
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 265 GICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSP 324
CK G L +A + N+M G + NV+T+ ++ +C R +AE L +M G P
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 325 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYL 384
++ ++N LI+ + + RA+++L ++ G P+ L Y + G C +K++ A +
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 530
Query: 385 EIMVSRGCYPDIVTYNTLLTA-----------------------------------LCKD 409
M G + + Y TL+ A LCK+
Sbjct: 531 NEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKN 590
Query: 410 GKVDVAVEILNQLSNKH-CSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTIT 468
V AV+ N++SN + +IDGL K + E A L E+M KGL PD
Sbjct: 591 KLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTA 650
Query: 469 YSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMV 528
Y+SL+ G ++G V EA+ L + +G++ +++ Y S++ GL Q +A L +M+
Sbjct: 651 YTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMI 710
Query: 529 TRSCKPTEATYTILIEGIAYEGLAKEALDLLNQL 562
P E +++ G EA++L + L
Sbjct: 711 GEGIHPDEVLCISVLKKHYELGCIDEAVELQSYL 744
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 214/426 (50%), Gaps = 3/426 (0%)
Query: 151 VPDVITYNVLISGYCRLGEIDNALQVLERMS---VAPDVVTYNTILRTLCDSGKLNLAME 207
VP ++ L S LG ++ A+Q +M V P + N +L GK +
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 208 VLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGIC 267
+ P V TY I+I+ CKE V A L +EM+ +G +PD VTYN +++G
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 268 KEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVV 327
K GRLD+ + F +M C+P+VIT+N ++ C G+ EM G P+VV
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368
Query: 328 TFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIM 387
+++ L++ C++G++ +AI M + G PN +Y ++ CK + A M
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 388 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKT 447
+ G ++VTY L+ LC ++ A E+ ++ P L +YN +I G K
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 448 EQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSI 507
++A++LL E++ +G+KPD + Y + + GL K++ A + ++++ G++ N + Y ++
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548
Query: 508 MLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
M K+ + +L +M + T T+ +LI+G+ L +A+D N++ +
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608
Query: 568 VKKSSA 573
++ ++A
Sbjct: 609 LQANAA 614
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 173/316 (54%)
Query: 252 CIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAE 311
C+P ++ L + + G L+EAI+ + M + P + N +L G+ D +
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 247
Query: 312 RLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGF 371
R +M+ G P+V T+NI+I+ +C++G + A + E+M G P++++YN ++ GF
Sbjct: 248 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 372 CKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVL 431
K ++D + + E M C PD++TYN L+ CK GK+ + +E ++ P +
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 432 ITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHD 491
++Y+T++D K G +QA+K +MR GL P+ TY+SL+ + G + +A +L ++
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 427
Query: 492 LERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGL 551
+ ++GV NV+TY +++ GLC A + A ++ M T P A+Y LI G
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487
Query: 552 AKEALDLLNQLCSRGV 567
AL+LLN+L RG+
Sbjct: 488 MDRALELLNELKGRGI 503
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 168/330 (50%)
Query: 217 CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAI 276
C P + L + +A++ +M+ P + N L++ K G+ D+
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 247
Query: 277 KFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFL 336
+F DM G +P V T+NI++ MC G A L EM +G P VT+N +I+
Sbjct: 248 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 337 CRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDI 396
+ G L + E+M C P+ ++YN +++ FCK K+ +E+ M G P++
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 397 VTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEE 456
V+Y+TL+ A CK+G + A++ + P TY ++ID K+G A +L E
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 427
Query: 457 MRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQ 516
M G++ + +TY++L+ GL ++ EA +LF ++ GV PN+ +YN+++ G KA+
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487
Query: 517 TYRAIDILADMVTRSCKPTEATYTILIEGI 546
RA+++L ++ R KP Y I G+
Sbjct: 488 MDRALELLNELKGRGIKPDLLLYGTFIWGL 517
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 123/272 (45%), Gaps = 4/272 (1%)
Query: 88 NNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
N + V+ ++ + L + G PD++ + I G C + K A VM +++
Sbjct: 476 NALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKE 535
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNL 204
G + + Y L+ Y + G L +L+ M + VVT+ ++ LC + ++
Sbjct: 536 CGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSK 595
Query: 205 AMEVLHK-QLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLV 263
A++ ++ + + +T +I+ CK++ V A L ++M KG +PD Y L+
Sbjct: 596 AVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655
Query: 264 NGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCS 323
+G K+G + EA+ + M G + +++ + ++ + + A L EM+ +G
Sbjct: 656 DGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIH 715
Query: 324 PSVVTFNILINFLCRKGLLGRAIDILEKMPKH 355
P V ++ G + A+++ + KH
Sbjct: 716 PDEVLCISVLKKHYELGCIDEAVELQSYLMKH 747
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 265 bits (677), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 148/531 (27%), Positives = 266/531 (50%), Gaps = 39/531 (7%)
Query: 89 NHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDS 148
N R+++++ +L++ MV P I+ + L+ K+ K + E +++
Sbjct: 45 NLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL 104
Query: 149 GAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLA 205
G ++ TY++ I+ +CR ++ AL +L +M P +VT N++L C +++ A
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 206 MEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNG 265
+ ++ + +E PD +T+T L+ + + +A+ L++ M KGC PD+VTY ++NG
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224
Query: 266 ICKEG-----------------------------------RLDEAIKFLNDMPSYGCQPN 290
+CK G +D+A N M + G +P+
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284
Query: 291 VITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILE 350
V T+N ++ +C+ GRW DA RLL++M+ K +P +V FN LI+ ++G L A + +
Sbjct: 285 VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 351 KMPKHG-CTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKD 409
+M K C P+ ++YN ++ GFCK K+++ +E M RG + VTY TL+ +
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404
Query: 410 GKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITY 469
D A + Q+ + P ++TYN ++DGL G E A+ + E M+ + +K D +TY
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY 464
Query: 470 SSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVT 529
++++ L + GKV++ LF L GV+PNV+TY ++M G C+ A + +M
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Query: 530 RSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSSAEQVAVKM 580
P TY LI +G + +L+ ++ S G +S + M
Sbjct: 525 DGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNM 575
Score = 264 bits (675), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/492 (30%), Positives = 263/492 (53%), Gaps = 8/492 (1%)
Query: 75 MENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGK 134
M+N ++ + + + R +L L M+ G P I+ SL+ GFC +
Sbjct: 101 MQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 160
Query: 135 TRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERMSV---APDVVTYNT 191
+A +++ + + G PD +T+ L+ G + + A+ ++ERM V PD+VTY
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220
Query: 192 ILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKG 251
++ LC G+ +LA+ +L+K + + DV+ Y +I+ CK + A L ++M KG
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 252 CIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAE 311
PDV TYN L++ +C GR +A + L+DM P+++ N ++ + G+ ++AE
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 312 RLLAEMV-LKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHG 370
+L EMV K C P VV +N LI C+ + +++ +M + G N+++Y ++HG
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Query: 371 FCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPV 430
F + + D A + MVS G +PDI+TYN LL LC +G V+ A+ + + +
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD 460
Query: 431 LITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFH 490
++TY T+I+ L K GK E L + KG+KP+ +TY++++ G R+G +EA LF
Sbjct: 461 IVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFV 520
Query: 491 DLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCK-PTEATYTILIEGIAYE 549
+++ G PN TYN+++ + + +++ +M RSC +A+ L+ + ++
Sbjct: 521 EMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM--RSCGFAGDASTFGLVTNMLHD 578
Query: 550 G-LAKEALDLLN 560
G L K LD+L+
Sbjct: 579 GRLDKSFLDMLS 590
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 265 bits (676), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 147/483 (30%), Positives = 258/483 (53%), Gaps = 4/483 (0%)
Query: 88 NNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
N L L R G ++E + M+ P+I ++ G+CK+G +A + + + +
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLERMSVAP---DVVTYNTILRTLCDSGKLNL 204
+G PD TY LI GYC+ ++D+A +V M + + V Y ++ LC + +++
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDE 306
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
AM++ K + EC+P V TYT+LI++ C +A+ L+ EM G P++ TY VL++
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Query: 265 GICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSP 324
+C + + ++A + L M G PNVIT+N ++ C G DA ++ M + SP
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426
Query: 325 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYL 384
+ T+N LI C+ + +A+ +L KM + P+ ++YN ++ G C+ D A L
Sbjct: 427 NTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 385 EIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKV 444
+M RG PD TY +++ +LCK +V+ A ++ + L K +P ++ Y +IDG K
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 445 GKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITY 504
GK ++A +LE+M +K P+++T+++L+ GL +GK+ EA L + ++G++P V T
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605
Query: 505 NSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCS 564
++ L K A M++ KP TYT I+ EG +A D++ ++
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665
Query: 565 RGV 567
GV
Sbjct: 666 NGV 668
Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/425 (33%), Positives = 236/425 (55%), Gaps = 4/425 (0%)
Query: 157 YNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQL 213
YN L++ R G +D QV M V P++ TYN ++ C G + A + + K +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 214 EKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLD 273
E PD TYT LI C+ + A K+ +EM KGC + V Y L++G+C R+D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 274 EAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILI 333
EA+ M C P V T+ ++++S+C + R +A L+ EM G P++ T+ +LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 334 NFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCY 393
+ LC + +A ++L +M + G PN ++YN +++G+CK ++ A++ +E+M SR
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 394 PDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKL 453
P+ TYN L+ CK V A+ +LN++ + P ++TYN++IDG + G + A +L
Sbjct: 426 PNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 454 LEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCK 513
L M +GL PD TY+S++ L + +V+EA LF LE+ GV PNV+ Y +++ G CK
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 514 ARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSSA 573
A + A +L M++++C P T+ LI G+ +G KEA L ++ G+ S
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604
Query: 574 EQVAV 578
+ + +
Sbjct: 605 DTILI 609
Score = 242 bits (617), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 142/465 (30%), Positives = 239/465 (51%), Gaps = 25/465 (5%)
Query: 102 EGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLI 161
E ++ M G P+I T LI C K KA ++ + + G +P+VITYN LI
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 162 SGYCRLGEIDNALQVLERMS---VAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECY 218
+GYC+ G I++A+ V+E M ++P+ TYN +++ C S ++ AM VL+K LE++
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVL 459
Query: 219 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKF 278
PDV+TY LI+ C+ A +LL M ++G +PD TY +++ +CK R++EA
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 279 LNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCR 338
+ + G PNV+ + ++ C G+ +A +L +M+ K C P+ +TFN LI+ LC
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579
Query: 339 KGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVT 398
G L A + EKM K G P + ++H K+ D A + M+S G PD T
Sbjct: 580 DGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT 639
Query: 399 YNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMR 458
Y T + C++G++ A +++ ++ SP L TY+++I G +G+T A +L+ MR
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699
Query: 459 TKGLKPDTITYSSLVG------------------GLSREGKVDEAIKLFHDLERLGVRPN 500
G +P T+ SL+ +S + D ++L + V PN
Sbjct: 700 DTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPN 759
Query: 501 VITYNSIMLGLCKARQTYRAIDILADMVTRS--CKPTEATYTILI 543
+Y ++LG+C+ R + + D + R+ P+E + L+
Sbjct: 760 AKSYEKLILGICEV-GNLRVAEKVFDHMQRNEGISPSELVFNALL 803
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 136/514 (26%), Positives = 240/514 (46%), Gaps = 29/514 (5%)
Query: 60 AFVQGHLNNGHISSG------MENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYH 113
A + G+ G I ME+ L+ + + N L + + + L M+
Sbjct: 398 ALINGYCKRGMIEDAVDVVELMESRKLS-PNTRTYNELIKGYCKSNVHKAMGVLNKMLER 456
Query: 114 GDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNA 173
+PD++ SLI G C+ G A R++ ++ D G VPD TY +I C+ ++ A
Sbjct: 457 KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEA 516
Query: 174 ---LQVLERMSVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEA 230
LE+ V P+VV Y ++ C +GK++ A +L K L K C P+ +T+ LI
Sbjct: 517 CDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHG 576
Query: 231 TCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPN 290
C + + +A L ++M G P V T +L++ + K+G D A M S G +P+
Sbjct: 577 LCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPD 636
Query: 291 VITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILE 350
T+ +++ C GR +DAE ++A+M G SP + T++ LI G A D+L+
Sbjct: 637 AHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLK 696
Query: 351 KMPKHGCTPNSLSY------------------NPVLHGFCKEKKMDRAIEYLEIMVSRGC 392
+M GC P+ ++ P L + D +E LE MV
Sbjct: 697 RMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSV 756
Query: 393 YPDIVTYNTLLTALCKDGKVDVAVEILNQLS-NKHCSPVLITYNTVIDGLSKVGKTEQAM 451
P+ +Y L+ +C+ G + VA ++ + + N+ SP + +N ++ K+ K +A
Sbjct: 757 TPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAA 816
Query: 452 KLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGL 511
K++++M G P + L+ GL ++G+ + +F +L + G + + + I+ G+
Sbjct: 817 KVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGV 876
Query: 512 CKARQTYRAIDILADMVTRSCKPTEATYTILIEG 545
K ++ M CK + TY++LIEG
Sbjct: 877 GKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 265 bits (676), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/486 (31%), Positives = 261/486 (53%), Gaps = 10/486 (2%)
Query: 92 RRLVRNG----ELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
R ++RNG + E MV +P II T L+ K+ K + + ++
Sbjct: 41 REILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQI 100
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNL 204
G D+ T N+L++ +C+ + A L +M PD+VT+ +++ C ++
Sbjct: 101 MGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEE 160
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
AM ++++ +E PDV+ YT +I++ CK V A+ L D+M N G PDVV Y LVN
Sbjct: 161 AMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220
Query: 265 GICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSP 324
G+C GR +A L M +P+VIT N ++ + G+++DAE L EM+ +P
Sbjct: 221 GLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280
Query: 325 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYL 384
++ T+ LIN C +G + A + M GC P+ ++Y +++GFCK KK+D A++
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 385 EIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKV 444
M +G + +TY TL+ + GK +VA E+ + + ++ P + TYN ++ L
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400
Query: 445 GKTEQAMKLLEEMRTK---GLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNV 501
GK ++A+ + E+M+ + G+ P+ TY+ L+ GL GK+++A+ +F D+ + + +
Sbjct: 401 GKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGI 460
Query: 502 ITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQ 561
ITY I+ G+CKA + A+++ + ++ KP TYT +I G+ EGL EA L +
Sbjct: 461 ITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRK 520
Query: 562 LCSRGV 567
+ GV
Sbjct: 521 MKEDGV 526
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 194/377 (51%)
Query: 189 YNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMR 248
Y ILR S + N A+++ +E P +I +T L+ K + L D ++
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 249 NKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWM 308
G D+ T N+L+N C+ + A FL M G +P+++T ++ C R
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 309 DAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVL 368
+A ++ +MV G P VV + +I+ LC+ G + A+ + ++M +G P+ + Y ++
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 369 HGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCS 428
+G C + A L M R PD++T+N L+ A K+GK A E+ N++ +
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 429 PVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKL 488
P + TY ++I+G G ++A ++ M TKG PD + Y+SL+ G + KVD+A+K+
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339
Query: 489 FHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAY 548
F+++ + G+ N ITY +++ G + + A ++ + MV+R P TY +L+ + Y
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399
Query: 549 EGLAKEALDLLNQLCSR 565
G K+AL + + R
Sbjct: 400 NGKVKKALMIFEDMQKR 416
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 161/311 (51%), Gaps = 12/311 (3%)
Query: 60 AFVQGHLNNGH------ISSGMENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYH 113
+ V G N+G + GM + + N + V+ G+ + + M+
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 114 GDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNA 173
P+I TSLI GFC G +A ++ ++E G PDV+ Y LI+G+C+ ++D+A
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA 336
Query: 174 LQVLERMS---VAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEA 230
+++ MS + + +TY T+++ GK N+A EV + + P++ TY +L+
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396
Query: 231 TCKESGVGQAMKLLDEMRNK---GCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGC 287
C V +A+ + ++M+ + G P++ TYNVL++G+C G+L++A+ DM
Sbjct: 397 LCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREM 456
Query: 288 QPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAID 347
+IT+ II++ MC G+ +A L + KG P+VVT+ +I+ L R+GL A
Sbjct: 457 DIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHV 516
Query: 348 ILEKMPKHGCT 358
+ KM + G +
Sbjct: 517 LFRKMKEDGVS 527
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 154/319 (48%), Gaps = 12/319 (3%)
Query: 68 NGHISSG------MENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIP 121
NGH++ MEN + + + + L +G + L M PD+I
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 122 CTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERMS 181
+LI F K GK A + + P++ TY LI+G+C G +D A Q+ M
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 182 VA---PDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVG 238
PDVV Y +++ C K++ AM++ ++ +K + ITYT LI+ +
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 239 QAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSY---GCQPNVITHN 295
A ++ M ++G P++ TYNVL++ +C G++ +A+ DM G PN+ T+N
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 296 IILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKH 355
++L +C G+ A + +M + ++T+ I+I +C+ G + A+++ +P
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489
Query: 356 GCTPNSLSYNPVLHGFCKE 374
G PN ++Y ++ G +E
Sbjct: 490 GVKPNVVTYTTMISGLFRE 508
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 96/205 (46%)
Query: 363 SYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL 422
+Y +L + + A++ MV P I+ + LL + K K DV + + + L
Sbjct: 39 NYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHL 98
Query: 423 SNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKV 482
S L T N +++ + + A L +M G +PD +T++SL+ G ++
Sbjct: 99 QIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM 158
Query: 483 DEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTIL 542
+EA+ + + + +G++P+V+ Y +I+ LCK A+ + M +P YT L
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 543 IEGIAYEGLAKEALDLLNQLCSRGV 567
+ G+ G ++A LL + R +
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKI 243
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 263 bits (671), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 149/489 (30%), Positives = 252/489 (51%), Gaps = 11/489 (2%)
Query: 62 VQGHLNNGHISSGMENSSLNFEDF----ESNNHLRRLVRNG----ELEEGFKFLESMVYH 113
+ H + IS+ +SL+ F + + R+++RNG + + MV+
Sbjct: 18 LHSHRHRLQISNPRTAASLSLCGFCFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHS 77
Query: 114 GDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNA 173
+P II T L+ K+ + + E ++ G P + T N+++ C + A
Sbjct: 78 RPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRA 137
Query: 174 ---LQVLERMSVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEA 230
L + ++ PD+VT+ ++L C ++ A+ + + L P+V+TYT LI
Sbjct: 138 SCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRC 197
Query: 231 TCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPN 290
CK + A++L ++M G P+VVTYN LV G+C+ GR +A L DM +PN
Sbjct: 198 LCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPN 257
Query: 291 VITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILE 350
VIT ++ + G+ M+A+ L M+ P V T+ LIN LC GLL A +
Sbjct: 258 VITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFY 317
Query: 351 KMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDG 410
M ++GC PN + Y ++HGFCK K+++ ++ M +G + +TY L+ C G
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
Query: 411 KVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYS 470
+ DVA E+ NQ+S++ P + TYN ++DGL GK E+A+ + E MR + + + +TY+
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437
Query: 471 SLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTR 530
++ G+ + GKV++A LF L G++PNVITY +++ G C+ + A + M
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497
Query: 531 SCKPTEATY 539
P E+ Y
Sbjct: 498 GFLPNESVY 506
Score = 239 bits (610), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 128/431 (29%), Positives = 224/431 (51%), Gaps = 3/431 (0%)
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLERMSV---APDVVTYNTILRTLCDSGKLNL 204
S +P +I + L+S ++ D + + E+M + P + T N ++ +C S +
Sbjct: 77 SRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCR 136
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
A L K ++ PD++T+T L+ C + + A+ L D++ G P+VVTY L+
Sbjct: 137 ASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIR 196
Query: 265 GICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSP 324
+CK L+ A++ N M + G +PNV+T+N ++ +C GRW DA LL +M+ + P
Sbjct: 197 CLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEP 256
Query: 325 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYL 384
+V+TF LI+ + G L A ++ M + P+ +Y +++G C +D A +
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 385 EIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKV 444
+M GCYP+ V Y TL+ CK +V+ ++I ++S K ITY +I G V
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Query: 445 GKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITY 504
G+ + A ++ +M ++ PD TY+ L+ GL GKV++A+ +F + + + N++TY
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTY 436
Query: 505 NSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCS 564
I+ G+CK + A D+ + ++ KP TYT +I G GL EA L ++
Sbjct: 437 TIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Query: 565 RGVVKKSSAEQ 575
G + S +
Sbjct: 497 DGFLPNESVYK 507
Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 194/415 (46%), Gaps = 35/415 (8%)
Query: 188 TYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEM 247
+Y ILR + + N A+++ + + P +I +T L+ K + + L ++M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 248 RNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRW 307
+ G P + T N++++ +C + A FL M G +P+++T +L C R
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 308 MDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPV 367
DA L +++ G P+VVT+ LI LC+ L A+++ +M +G PN ++YN +
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 368 LHGFC-----------------------------------KEKKMDRAIEYLEIMVSRGC 392
+ G C K K+ A E +M+
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 393 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMK 452
YPD+ TY +L+ LC G +D A ++ + C P + Y T+I G K + E MK
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349
Query: 453 LLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLC 512
+ EM KG+ +TITY+ L+ G G+ D A ++F+ + P++ TYN ++ GLC
Sbjct: 350 IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC 409
Query: 513 KARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
+ +A+ I M R TYTI+I+G+ G ++A DL L S+G+
Sbjct: 410 CNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGM 464
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 165/319 (51%), Gaps = 1/319 (0%)
Query: 261 VLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLK 320
+L NG+ + ++A+ M P++I +L + R+ L +M +
Sbjct: 54 ILRNGL-HNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQIL 112
Query: 321 GCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRA 380
G P + T NI+++ +C RA L KM K G P+ +++ +L+G+C +++ A
Sbjct: 113 GIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA 172
Query: 381 IEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDG 440
I + ++ G P++VTY TL+ LCK+ ++ AVE+ NQ+ P ++TYN ++ G
Sbjct: 173 IALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG 232
Query: 441 LSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPN 500
L ++G+ A LL +M + ++P+ IT+++L+ + GK+ EA +L++ + ++ V P+
Sbjct: 233 LCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPD 292
Query: 501 VITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLN 560
V TY S++ GLC A + M C P E YT LI G ++ + +
Sbjct: 293 VFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFY 352
Query: 561 QLCSRGVVKKSSAEQVAVK 579
++ +GVV + V ++
Sbjct: 353 EMSQKGVVANTITYTVLIQ 371
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 262 bits (670), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 154/490 (31%), Positives = 255/490 (52%), Gaps = 5/490 (1%)
Query: 82 FEDFESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRV 141
F + N L+ L RN E + L M + +PD+ ++IRGFC+ + KA +
Sbjct: 140 FNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALEL 199
Query: 142 MEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCD 198
++ SG ++T+ +LI +C+ G++D A+ L+ M + D+V Y +++R CD
Sbjct: 200 ANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCD 259
Query: 199 SGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVT 258
G+L+ + + LE+ P ITY LI CK + +A ++ + M +G P+V T
Sbjct: 260 CGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319
Query: 259 YNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMV 318
Y L++G+C G+ EA++ LN M +PN +T+NII+ +C G DA ++ M
Sbjct: 320 YTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMK 379
Query: 319 LKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGC--TPNSLSYNPVLHGFCKEKK 376
+ P +T+NIL+ LC KG L A +L M K P+ +SYN ++HG CKE +
Sbjct: 380 KRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENR 439
Query: 377 MDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNT 436
+ +A++ +++V + D VT N LL + K G V+ A+E+ Q+S+ TY
Sbjct: 440 LHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTA 499
Query: 437 VIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLG 496
+IDG K G A LL +MR L+P Y+ L+ L +EG +D+A +LF +++R
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 497 VRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEAL 556
P+V+++N ++ G KA A +L M P TY+ LI G EA+
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI 619
Query: 557 DLLNQLCSRG 566
+++ G
Sbjct: 620 SFFDKMVDSG 629
Score = 246 bits (628), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 229/418 (54%), Gaps = 5/418 (1%)
Query: 96 RNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVI 155
+ G+++E FL+ M + G D++ TSLIRGFC G+ + + + V + G P I
Sbjct: 224 KAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI 283
Query: 156 TYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQ 212
TYN LI G+C+LG++ A ++ E M V P+V TY ++ LC GK A+++L+
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343
Query: 213 LEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRL 272
+EK+ P+ +TY I+I CK+ V A+++++ M+ + PD +TYN+L+ G+C +G L
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403
Query: 273 DEAIKFLNDM--PSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFN 330
DEA K L M S P+VI++N ++ +C R A + +V K + VT N
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463
Query: 331 ILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSR 390
IL+N + G + +A+++ +++ NS +Y ++ GFCK ++ A L M
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523
Query: 391 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQA 450
P + YN LL++LCK+G +D A + ++ + P ++++N +IDG K G + A
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583
Query: 451 MKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIM 508
LL M GL PD TYS L+ + G +DEAI F + G P+ +S++
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/474 (28%), Positives = 238/474 (50%), Gaps = 8/474 (1%)
Query: 105 KFLESMVYHGDIPDIIPCTSLIRGFCKVG--KTRKATRVMEIVEDSGAVPDVITYNVLIS 162
K L VY + + +R C+ + + A V + DSG+ N L++
Sbjct: 22 KLLNPRVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSL-AFAGNNLMA 80
Query: 163 GYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYP 219
R + A +M + V+ + +L K A VL L++
Sbjct: 81 KLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAF 140
Query: 220 DVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFL 279
+V + IL++ C+ G+A+ LL EMR +PDV +YN ++ G C+ L++A++
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 280 NDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRK 339
N+M GC +++T I++ + C G+ +A L EM G +V + LI C
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 340 GLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTY 399
G L R + +++ + G +P +++YN ++ GFCK ++ A E E M+ RG P++ TY
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 400 NTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRT 459
L+ LC GK A+++LN + K P +TYN +I+ L K G A++++E M+
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 460 KGLKPDTITYSSLVGGLSREGKVDEAIKLFHDL--ERLGVRPNVITYNSIMLGLCKARQT 517
+ +PD ITY+ L+GGL +G +DEA KL + + + P+VI+YN+++ GLCK +
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL 440
Query: 518 YRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKS 571
++A+DI +V + T IL+ G +A++L Q+ +V+ S
Sbjct: 441 HQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 203/383 (53%), Gaps = 5/383 (1%)
Query: 88 NNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
N +R + G+L+E + E M+ G P++ T LI G C VGKT++A +++ ++ +
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLERMS---VAPDVVTYNTILRTLCDSGKLNL 204
P+ +TYN++I+ C+ G + +A++++E M PD +TYN +L LC G L+
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405
Query: 205 AMEVLHKQLEKECY--PDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVL 262
A ++L+ L+ Y PDVI+Y LI CKE+ + QA+ + D + K D VT N+L
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL 465
Query: 263 VNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGC 322
+N K G +++A++ + N T+ ++ C TG A+ LL +M +
Sbjct: 466 LNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525
Query: 323 SPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIE 382
PSV +N L++ LC++G L +A + E+M + P+ +S+N ++ G K + A
Sbjct: 526 QPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAES 585
Query: 383 YLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLS 442
L M G PD+ TY+ L+ K G +D A+ +++ + P ++V+
Sbjct: 586 LLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCI 645
Query: 443 KVGKTEQAMKLLEEMRTKGLKPD 465
G+T++ +L++++ K + D
Sbjct: 646 SQGETDKLTELVKKLVDKDIVLD 668
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 17/128 (13%)
Query: 32 FQKQRQNRVFAISKVETLSFNVKMKHGEAFVQGHLNNGHISS------GMENSSLNFEDF 85
F++ +++ F + +SFN+ + G L G I S GM + L+ + F
Sbjct: 552 FEEMQRDNNFP----DVVSFNI-------MIDGSLKAGDIKSAESLLVGMSRAGLSPDLF 600
Query: 86 ESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIV 145
+ + R ++ G L+E F + MV G PD C S+++ G+T K T +++ +
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKL 660
Query: 146 EDSGAVPD 153
D V D
Sbjct: 661 VDKDIVLD 668
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 261 bits (666), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/482 (30%), Positives = 265/482 (54%), Gaps = 12/482 (2%)
Query: 91 LRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDS-- 148
L + G+ + + M+ P+++ C +L+ G + + + E+ +D
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVK 197
Query: 149 -GAVPDVITYNVLISGYCRLGEIDNALQVLERM----SVAPDVVTYNTILRTLCDSGKLN 203
G +V T+NVL++GYC G++++AL +LERM V PD VTYNTIL+ + G+L+
Sbjct: 198 IGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLS 257
Query: 204 LAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLV 263
E+L + P+ +TY L+ CK + +A ++++ M+ +PD+ TYN+L+
Sbjct: 258 DLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILI 317
Query: 264 NGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCS 323
NG+C G + E ++ ++ M S QP+V+T+N ++ G ++A +L+ +M G
Sbjct: 318 NGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVK 377
Query: 324 PSVVTFNILINFLC---RKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRA 380
+ VT NI + +LC ++ + R + L M HG +P+ ++Y+ ++ + K + A
Sbjct: 378 ANQVTHNISLKWLCKEEKREAVTRKVKELVDM--HGFSPDIVTYHTLIKAYLKVGDLSGA 435
Query: 381 IEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDG 440
+E + M +G + +T NT+L ALCK+ K+D A +LN + +TY T+I G
Sbjct: 436 LEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMG 495
Query: 441 LSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPN 500
+ K E+A+++ +EM+ + P T++SL+GGL GK + A++ F +L G+ P+
Sbjct: 496 FFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPD 555
Query: 501 VITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLN 560
T+NSI+LG CK + +A + + + S KP T IL+ G+ EG+ ++AL+ N
Sbjct: 556 DSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFN 615
Query: 561 QL 562
L
Sbjct: 616 TL 617
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 146/518 (28%), Positives = 268/518 (51%), Gaps = 40/518 (7%)
Query: 80 LNFEDFESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKAT 139
+N ++ N L+ + + G L + + L M +G +P+ + +L+ G+CK+G ++A
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295
Query: 140 RVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTL 196
+++E+++ + +PD+ TYN+LI+G C G + L++++ M + PDVVTYNT++
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC 355
Query: 197 CDSGKLNLAMEVLHKQLEKE-CYPDVITYTILIEATCKE---SGVGQAMKLLDEMRNKGC 252
+ G L+L L +Q+E + + +T+ I ++ CKE V + +K L +M G
Sbjct: 356 FELG-LSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMH--GF 412
Query: 253 IPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAER 312
PD+VTY+ L+ K G L A++ + +M G + N IT N IL ++C + +A
Sbjct: 413 SPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHN 472
Query: 313 LLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFC 372
LL +G VT+ LI R+ + +A+++ ++M K TP ++N ++ G C
Sbjct: 473 LLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLC 532
Query: 373 KEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLI 432
K + A+E + + G PD T+N+++ CK+G+V+ A E N+ P
Sbjct: 533 HHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNY 592
Query: 433 TYNTVIDGLSKVGKTEQAMK----LLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKL 488
T N +++GL K G TE+A+ L+EE DT+TY++++ ++ K+ EA L
Sbjct: 593 TCNILLNGLCKEGMTEKALNFFNTLIEEREV-----DTVTYNTMISAFCKDKKLKEAYDL 647
Query: 489 FHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADM--------------VTRSCKP 534
++E G+ P+ TYNS + L + + ++L ++
Sbjct: 648 LSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPAT 707
Query: 535 TEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSS 572
+E+ + E IAY D++++LCSRG +K+ S
Sbjct: 708 SESKEELNTEAIAYS-------DVIDELCSRGRLKEHS 738
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 216/435 (49%), Gaps = 40/435 (9%)
Query: 179 RMSVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCK---ES 235
+S P ++ L GK ++A+++ K + + P+++T L+ +
Sbjct: 124 HLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSF 183
Query: 236 GVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS-YGCQPNVITH 294
+ A ++ D+M G +V T+NVLVNG C EG+L++A+ L M S + P+ +T+
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY 243
Query: 295 NIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPK 354
N IL++M GR D + LL +M G P+ VT+N L+ C+ G L A I+E M +
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303
Query: 355 HGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTL------------ 402
P+ +YN +++G C M +E ++ M S PD+VTYNTL
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363
Query: 403 -----------------------LTALCKDGKVDVAVEILNQLSNKH-CSPVLITYNTVI 438
L LCK+ K + + +L + H SP ++TY+T+I
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423
Query: 439 DGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVR 498
KVG A++++ EM KG+K +TIT ++++ L +E K+DEA L + + G
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483
Query: 499 PNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDL 558
+ +TY ++++G + + +A+++ +M PT +T+ LI G+ + G + A++
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543
Query: 559 LNQLCSRGVVKKSSA 573
++L G++ S
Sbjct: 544 FDELAESGLLPDDST 558
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 154/305 (50%), Gaps = 22/305 (7%)
Query: 297 ILRSMCSTGRWMDAERLLAEMV------LKGCS------------PSVVTFNILINFLCR 338
++RS+ S ++ DA+ LL + L C+ PS F+I ++
Sbjct: 84 VVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLH 143
Query: 339 KGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKK---MDRAIEYLEIMVSRGCYPD 395
+G A+ I +KM + PN L+ N +L G + + A E + MV G +
Sbjct: 144 EGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLN 203
Query: 396 IVTYNTLLTALCKDGKVDVAVEILNQL-SNKHCSPVLITYNTVIDGLSKVGKTEQAMKLL 454
+ T+N L+ C +GK++ A+ +L ++ S +P +TYNT++ +SK G+ +LL
Sbjct: 204 VQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELL 263
Query: 455 EEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKA 514
+M+ GL P+ +TY++LV G + G + EA ++ +++ V P++ TYN ++ GLC A
Sbjct: 264 LDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNA 323
Query: 515 RQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSSAE 574
++++ M + +P TY LI+G GL+ EA L+ Q+ + GV
Sbjct: 324 GSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTH 383
Query: 575 QVAVK 579
+++K
Sbjct: 384 NISLK 388
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 244/430 (56%), Gaps = 3/430 (0%)
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNAL---QVLERMSVAPDVVTYNTILRTLCDSGKLNL 204
S +P ++ + L++ L + + Q +E ++ D+ ++ ++ C +L+
Sbjct: 65 SQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSF 124
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
A+ VL K ++ P ++T+ L+ C + +G A L+ M G P+VV YN L++
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184
Query: 265 GICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSP 324
G+CK G L+ A++ LN+M G +V+T+N +L +C +GRW DA R+L +M+ + +P
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244
Query: 325 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYL 384
VVTF LI+ ++G L A ++ ++M + PN+++YN +++G C ++ A +
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF 304
Query: 385 EIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKV 444
++M S+GC+P++VTYNTL++ CK VD +++ ++S + + + TYNT+I G +V
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV 364
Query: 445 GKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITY 504
GK A+ + M ++ + PD IT+ L+ GL G+++ A+ F D+ ++ Y
Sbjct: 365 GKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAY 424
Query: 505 NSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCS 564
N ++ GLCKA + +A ++ + KP TYTI+I G+ G +EA +L+ ++
Sbjct: 425 NIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484
Query: 565 RGVVKKSSAE 574
G++ + +AE
Sbjct: 485 EGIICQMNAE 494
Score = 235 bits (599), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 216/417 (51%), Gaps = 3/417 (0%)
Query: 100 LEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNV 159
E+ F MV+ +P I+ T L+ + + + +E G D+ ++ +
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 160 LISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKE 216
LI +CR + AL VL +M P +VT+ ++L C ++ A ++ ++
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 217 CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAI 276
P+V+ Y LI+ CK + A++LL+EM KG DVVTYN L+ G+C GR +A
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 277 KFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFL 336
+ L DM P+V+T ++ G +A+ L EM+ P+ VT+N +IN L
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 337 CRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDI 396
C G L A + M GC PN ++YN ++ GFCK + +D ++ + M G DI
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 397 VTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEE 456
TYNTL+ C+ GK+ VA++I + ++ +P +IT+ ++ GL G+ E A+ ++
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411
Query: 457 MRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCK 513
MR + Y+ ++ GL + KV++A +LF L GV+P+ TY ++LGLCK
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468
Score = 215 bits (548), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 129/396 (32%), Positives = 208/396 (52%), Gaps = 3/396 (0%)
Query: 70 HISSGMENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGF 129
+ S ME ++ + + + R L L M+ G P I+ SL+ GF
Sbjct: 92 YFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGF 151
Query: 130 CKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVL---ERMSVAPDV 186
C V + A ++ ++ SG P+V+ YN LI G C+ GE++ AL++L E+ + DV
Sbjct: 152 CLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADV 211
Query: 187 VTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDE 246
VTYNT+L LC SG+ + A +L +++ PDV+T+T LI+ K+ + +A +L E
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Query: 247 MRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGR 306
M P+ VTYN ++NG+C GRL +A K + M S GC PNV+T+N ++ C
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 307 WMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNP 366
+ +L M +G + + T+N LI+ C+ G L A+DI M TP+ +++
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 367 VLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKH 426
+LHG C +++ A+ + M Y IV YN ++ LCK KV+ A E+ +L +
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451
Query: 427 CSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGL 462
P TY +I GL K G +A +L+ M+ +G+
Sbjct: 452 VKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 185/369 (50%), Gaps = 1/369 (0%)
Query: 189 YNTILRT-LCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEM 247
Y LRT S + A + + + + P ++ +T L+ AT + +M
Sbjct: 38 YREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKM 97
Query: 248 RNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRW 307
G D+ ++ +L++ C+ RL A+ L M G +P+++T +L C R
Sbjct: 98 ELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRI 157
Query: 308 MDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPV 367
DA L+ MV G P+VV +N LI+ LC+ G L A+++L +M K G + ++YN +
Sbjct: 158 GDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTL 217
Query: 368 LHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHC 427
L G C + A L M+ R PD+VT+ L+ K G +D A E+ ++
Sbjct: 218 LTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277
Query: 428 SPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIK 487
P +TYN++I+GL G+ A K + M +KG P+ +TY++L+ G + VDE +K
Sbjct: 278 DPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMK 337
Query: 488 LFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIA 547
LF + G ++ TYN+++ G C+ + A+DI MV+R P T+ IL+ G+
Sbjct: 338 LFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLC 397
Query: 548 YEGLAKEAL 556
G + AL
Sbjct: 398 VNGEIESAL 406
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 163/328 (49%)
Query: 240 AMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILR 299
A L EM + +P +V + L+ R + I F M YG ++ + I++
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 300 SMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTP 359
C R A +L +M+ G PS+VTF L++ C +G A ++ M K G P
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 360 NSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 419
N + YN ++ G CK +++ A+E L M +G D+VTYNTLLT LC G+ A +L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 420 NQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSRE 479
+ + +P ++T+ +ID K G ++A +L +EM + P+ +TY+S++ GL
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 480 GKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATY 539
G++ +A K F + G PNV+TYN+++ G CK R + + M TY
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354
Query: 540 TILIEGIAYEGLAKEALDLLNQLCSRGV 567
LI G G + ALD+ + SR V
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSRRV 382
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 169/331 (51%), Gaps = 11/331 (3%)
Query: 236 GVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHN 295
G G A + + R K L G R ++A +M P+++
Sbjct: 27 GGGAAARAFSDYREK-----------LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFT 75
Query: 296 IILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKH 355
+L + + R+ +M L G S + +F ILI+ CR L A+ +L KM K
Sbjct: 76 RLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKL 135
Query: 356 GCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVA 415
G P+ +++ +LHGFC ++ A + +MV G P++V YNTL+ LCK+G++++A
Sbjct: 136 GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIA 195
Query: 416 VEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGG 475
+E+LN++ K ++TYNT++ GL G+ A ++L +M + + PD +T+++L+
Sbjct: 196 LELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDV 255
Query: 476 LSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPT 535
++G +DEA +L+ ++ + V PN +TYNSI+ GLC + Y A M ++ C P
Sbjct: 256 FVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPN 315
Query: 536 EATYTILIEGIAYEGLAKEALDLLNQLCSRG 566
TY LI G + E + L ++ G
Sbjct: 316 VVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 120/239 (50%), Gaps = 7/239 (2%)
Query: 59 EAFV-QGHLNNGH-ISSGMENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYHGDI 116
+ FV QG+L+ + M SS++ + N+ + L +G L + K + M G
Sbjct: 254 DVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF 313
Query: 117 PDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQV 176
P+++ +LI GFCK + ++ + + G D+ TYN LI GYC++G++ AL +
Sbjct: 314 PNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDI 373
Query: 177 LERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCK 233
M V PD++T+ +L LC +G++ A+ E E Y ++ Y I+I CK
Sbjct: 374 FCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCK 433
Query: 234 ESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYG--CQPN 290
V +A +L + +G PD TY +++ G+CK G EA + + M G CQ N
Sbjct: 434 ADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMN 492
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%)
Query: 370 GFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSP 429
GF + + A MV P IV + LLTA + + + ++ S
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 430 VLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLF 489
L ++ +I + + A+ +L +M G +P +T+ SL+ G ++ +A L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 490 HDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYE 549
+ + G PNV+ YN+++ GLCK + A+++L +M + TY L+ G+ Y
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 550 GLAKEALDLLNQLCSRGV 567
G +A +L + R +
Sbjct: 225 GRWSDAARMLRDMMKRSI 242
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 259 bits (663), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 152/513 (29%), Positives = 249/513 (48%), Gaps = 40/513 (7%)
Query: 94 LVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPD 153
LVR G +E + + + G ++ ++ CK GK K + V++ G PD
Sbjct: 210 LVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPD 269
Query: 154 VITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLH 210
++TYN LIS Y G ++ A +++ M +P V TYNT++ LC GK A EV
Sbjct: 270 IVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFA 329
Query: 211 KQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNK-------------------- 250
+ L PD TY L+ CK+ V + K+ +MR++
Sbjct: 330 EMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSG 389
Query: 251 ---------------GCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHN 295
G IPD V Y +L+ G C++G + A+ N+M GC +V+T+N
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449
Query: 296 IILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKH 355
IL +C +A++L EM + P T ILI+ C+ G L A+++ +KM +
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 356 GCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVA 415
+ ++YN +L GF K +D A E MVS+ P ++Y+ L+ ALC G + A
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 416 VEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGG 475
+ +++ +K+ P ++ N++I G + G LE+M ++G PD I+Y++L+ G
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG 629
Query: 476 LSREGKVDEAIKLFHDL--ERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCK 533
RE + +A L + E+ G+ P+V TYNSI+ G C+ Q A +L M+ R
Sbjct: 630 FVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVN 689
Query: 534 PTEATYTILIEGIAYEGLAKEALDLLNQLCSRG 566
P +TYT +I G + EA + +++ RG
Sbjct: 690 PDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 232/447 (51%), Gaps = 3/447 (0%)
Query: 125 LIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERMS--- 181
LIR + + K R+A ++ G + N LI R+G ++ A V + +S
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 182 VAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAM 241
V +V T N ++ LC GK+ L + EK YPD++TY LI A + + +A
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290
Query: 242 KLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSM 301
+L++ M KG P V TYN ++NG+CK G+ + A + +M G P+ T+ +L
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 302 CSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNS 361
C G ++ E++ ++M + P +V F+ +++ R G L +A+ + + G P++
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 362 LSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 421
+ Y ++ G+C++ + A+ M+ +GC D+VTYNT+L LCK + A ++ N+
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 422 LSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGK 481
++ + P T +IDG K+G + AM+L ++M+ K ++ D +TY++L+ G + G
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 482 VDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTI 541
+D A +++ D+ + P I+Y+ ++ LC A + +M++++ KPT
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 542 LIEGIAYEGLAKEALDLLNQLCSRGVV 568
+I+G G A + L ++ S G V
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFV 617
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 210/415 (50%), Gaps = 10/415 (2%)
Query: 56 KHGEAFVQGHLNNGHISSGMENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYHGD 115
KHG+ + + SG+ S + L + G++ E K M
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSL-----LMEACKKGDVVETEKVFSDMRSRDV 371
Query: 116 IPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQ 175
+PD++ +S++ F + G KA V+++G +PD + Y +LI GYCR G I A+
Sbjct: 372 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMN 431
Query: 176 VLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATC 232
+ M A DVVTYNTIL LC L A ++ ++ E+ +PD T TILI+ C
Sbjct: 432 LRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHC 491
Query: 233 KESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVI 292
K + AM+L +M+ K DVVTYN L++G K G +D A + DM S P I
Sbjct: 492 KLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 551
Query: 293 THNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKM 352
+++I++ ++CS G +A R+ EM+ K P+V+ N +I CR G LEKM
Sbjct: 552 SYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 353 PKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSR--GCYPDIVTYNTLLTALCKDG 410
G P+ +SYN +++GF +E+ M +A ++ M G PD+ TYN++L C+
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 411 KVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPD 465
++ A +L ++ + +P TY +I+G +A ++ +EM +G PD
Sbjct: 672 QMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 212 bits (540), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 215/444 (48%), Gaps = 5/444 (1%)
Query: 98 GELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITY 157
G +EE F+ + +M G P + ++I G CK GK +A V + SG PD TY
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 158 NVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLE 214
L+ C+ G++ +V M V PD+V +++++ SG L+ A+ + E
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 215 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDE 274
PD + YTILI+ C++ + AM L +EM +GC DVVTYN +++G+CK L E
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 275 AIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILIN 334
A K N+M P+ T I++ C G +A L +M K VVT+N L++
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Query: 335 FLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYP 394
+ G + A +I M P +SY+ +++ C + + A + M+S+ P
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Query: 395 DIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLL 454
++ N+++ C+ G L ++ ++ P I+YNT+I G + +A L+
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLV 643
Query: 455 EEMRTK--GLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLC 512
++M + GL PD TY+S++ G R+ ++ EA + + GV P+ TY ++ G
Sbjct: 644 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFV 703
Query: 513 KARQTYRAIDILADMVTRSCKPTE 536
A I +M+ R P +
Sbjct: 704 SQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 213/421 (50%), Gaps = 5/421 (1%)
Query: 85 FESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEI 144
+ N + L ++G+ E + M+ G PD SL+ CK G + +V
Sbjct: 306 YTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSD 365
Query: 145 VEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERMSVA---PDVVTYNTILRTLCDSGK 201
+ VPD++ ++ ++S + R G +D AL + A PD V Y +++ C G
Sbjct: 366 MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 425
Query: 202 LNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNV 261
+++AM + ++ L++ C DV+TY ++ CK +G+A KL +EM + PD T +
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 262 LVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKG 321
L++G CK G L A++ M + +V+T+N +L G A+ + A+MV K
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 322 CSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAI 381
P+ ++++IL+N LC KG L A + ++M P + N ++ G+C+
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 382 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCS--PVLITYNTVID 439
+LE M+S G PD ++YNTL+ ++ + A ++ ++ + P + TYN+++
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665
Query: 440 GLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRP 499
G + + ++A +L +M +G+ PD TY+ ++ G + + EA ++ ++ + G P
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Query: 500 N 500
+
Sbjct: 726 D 726
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 215/441 (48%), Gaps = 37/441 (8%)
Query: 162 SGYCRLGEIDNALQVLERMSVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDV 221
SG RL EI N+L + D V ++ ++RT + KL A E K +
Sbjct: 143 SGVSRL-EIVNSLDSTFSNCGSNDSV-FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSI 200
Query: 222 ITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLND 281
LI + + V A + E+ G +V T N++VN +CK+G++++ FL+
Sbjct: 201 DACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQ 260
Query: 282 MPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGL 341
+ G P+++T+N ++ + S G +A L+ M KG SP V T+N +IN LC+ G
Sbjct: 261 VQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGK 320
Query: 342 LGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKE--------------------------- 374
RA ++ +M + G +P+S +Y +L CK+
Sbjct: 321 YERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSS 380
Query: 375 --------KKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKH 426
+D+A+ Y + G PD V Y L+ C+ G + VA+ + N++ +
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Query: 427 CSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAI 486
C+ ++TYNT++ GL K +A KL EM + L PD+ T + L+ G + G + A+
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAM 500
Query: 487 KLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGI 546
+LF ++ +R +V+TYN+++ G K A +I ADMV++ PT +Y+IL+ +
Sbjct: 501 ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560
Query: 547 AYEGLAKEALDLLNQLCSRGV 567
+G EA + +++ S+ +
Sbjct: 561 CSKGHLAEAFRVWDEMISKNI 581
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 162/321 (50%), Gaps = 2/321 (0%)
Query: 252 CIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMD-A 310
C + +++L+ + +L EA + + S G ++ N ++ S+ G W++ A
Sbjct: 161 CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIG-WVELA 219
Query: 311 ERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHG 370
+ E+ G +V T NI++N LC+ G + + L ++ + G P+ ++YN ++
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 371 FCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPV 430
+ + M+ A E + M +G P + TYNT++ LCK GK + A E+ ++ SP
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 431 LITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFH 490
TY +++ K G + K+ +MR++ + PD + +SS++ +R G +D+A+ F+
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 491 DLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEG 550
++ G+ P+ + Y ++ G C+ A+++ +M+ + C TY ++ G+
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 551 LAKEALDLLNQLCSRGVVKKS 571
+ EA L N++ R + S
Sbjct: 460 MLGEADKLFNEMTERALFPDS 480
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 125/259 (48%), Gaps = 17/259 (6%)
Query: 327 VTFNILINFLCRKGLLGRAIDILEKMPKHG-----------------CTPNSLSYNPVLH 369
++ + +I+ L R G L A L +M + C N ++ ++
Sbjct: 114 LSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIR 173
Query: 370 GFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSP 429
+ + +K+ A E ++ S+G I N L+ +L + G V++A + ++S
Sbjct: 174 TYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGI 233
Query: 430 VLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLF 489
+ T N +++ L K GK E+ L +++ KG+ PD +TY++L+ S +G ++EA +L
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 490 HDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYE 549
+ + G P V TYN+++ GLCK + RA ++ A+M+ P TY L+ +
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 550 GLAKEALDLLNQLCSRGVV 568
G E + + + SR VV
Sbjct: 354 GDVVETEKVFSDMRSRDVV 372
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 82/182 (45%)
Query: 392 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAM 451
C + ++ L+ + K+ A E L +K + + N +I L ++G E A
Sbjct: 161 CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAW 220
Query: 452 KLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGL 511
+ +E+ G+ + T + +V L ++GK+++ ++ GV P+++TYN+++
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 512 CKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKS 571
A +++ M + P TY +I G+ G + A ++ ++ G+ S
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 572 SA 573
+
Sbjct: 341 TT 342
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 259 bits (661), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 144/465 (30%), Positives = 249/465 (53%), Gaps = 42/465 (9%)
Query: 92 RRLVRNG----ELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
R ++R G EL++ M P II + L+ K+ K E +E
Sbjct: 47 REVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEI 106
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNL 204
G ++ TYN+LI+ +CR + AL +L +M PD+VT N++L C +++
Sbjct: 107 LGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISD 166
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
A+ ++ + +E PD +T+T LI + +A+ L+D M +GC PD+VTY +VN
Sbjct: 167 AVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVN 226
Query: 265 GICKEGRLDEAIKFLN-----------------------------------DMPSYGCQP 289
G+CK G D A+ LN +M + G +P
Sbjct: 227 GLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286
Query: 290 NVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDIL 349
NVIT++ ++ +C+ GRW DA RLL++M+ + +P++VTF+ LI+ +KG L +A +
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 350 EKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKD 409
E+M K PN +Y+ +++GFC ++ A + LE+M+ + C P++VTYNTL+ CK
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKA 406
Query: 410 GKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITY 469
+VD +E+ ++S + +TY T+I G + + A + ++M + G+ P+ +TY
Sbjct: 407 KRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 466
Query: 470 SSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKA 514
+ L+ GL + GK+ +A+ +F L+R + P++ TYN ++ G+CKA
Sbjct: 467 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 511
Score = 235 bits (599), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 121/375 (32%), Positives = 208/375 (55%), Gaps = 3/375 (0%)
Query: 110 MVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGE 169
M+ G PDI+ SL+ GFC + A +++ + + G PD +T+ LI G +
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 170 IDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTI 226
A+ +++RM PD+VTY ++ LC G +LA+ +L+K + +V+ Y+
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 227 LIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYG 286
+I++ CK A+ L EM NKG P+V+TY+ L++ +C GR +A + L+DM
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 287 CQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAI 346
PN++T + ++ + G+ + AE+L EM+ + P++ T++ LIN C LG A
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378
Query: 347 DILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTAL 406
+LE M + C PN ++YN +++GFCK K++D+ +E M RG + VTY TL+
Sbjct: 379 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438
Query: 407 CKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDT 466
+ D A + Q+ + P ++TYN ++DGL K GK +AM + E ++ ++PD
Sbjct: 439 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 498
Query: 467 ITYSSLVGGLSREGK 481
TY+ ++ G+ + GK
Sbjct: 499 YTYNIMIEGMCKAGK 513
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 229/454 (50%), Gaps = 38/454 (8%)
Query: 138 ATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILR 194
A + ++ S P +I ++ L+S ++ + D + E+M ++ ++ TYN ++
Sbjct: 62 AIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILIN 121
Query: 195 TLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIP 254
C +L+LA+ +L K ++ PD++T L+ C + + A+ L+D+M G P
Sbjct: 122 CFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKP 181
Query: 255 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTG--------- 305
D VT+ L++G+ + EA+ ++ M GCQP+++T+ ++ +C G
Sbjct: 182 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 241
Query: 306 --------------------------RWMDAERLLAEMVLKGCSPSVVTFNILINFLCRK 339
DA L EM KG P+V+T++ LI+ LC
Sbjct: 242 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 301
Query: 340 GLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTY 399
G A +L M + PN ++++ ++ F K+ K+ +A + E M+ R P+I TY
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361
Query: 400 NTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRT 459
++L+ C ++ A ++L + K C P ++TYNT+I+G K + ++ M+L EM
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ 421
Query: 460 KGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYR 519
+GL +T+TY++L+ G + D A +F + +GV PN++TYN ++ GLCK + +
Sbjct: 422 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 481
Query: 520 AIDILADMVTRSCKPTEATYTILIEGIAYEGLAK 553
A+ + + + +P TY I+IEG+ G K
Sbjct: 482 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 211/402 (52%), Gaps = 3/402 (0%)
Query: 169 EIDNALQVLERMSVA---PDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYT 225
E+D+A+ + M+ + P ++ ++ +L + K +L + K ++ TY
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 226 ILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSY 285
ILI C+ S + A+ LL +M G PD+VT N L+NG C R+ +A+ ++ M
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 286 GCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRA 345
G +P+ +T ++ + + +A L+ MV +GC P +VT+ ++N LC++G A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 346 IDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTA 405
+++L KM N + Y+ V+ CK + D A+ M ++G P+++TY++L++
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 406 LCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPD 465
LC G+ A +L+ + + +P L+T++ +ID K GK +A KL EEM + + P+
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 466 TITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILA 525
TYSSL+ G ++ EA ++ + R PNV+TYN+++ G CKA++ + +++
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Query: 526 DMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
+M R TYT LI G A + Q+ S GV
Sbjct: 418 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 459
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 198/380 (52%)
Query: 189 YNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMR 248
Y +LRT +L+ A+ + + +P +I ++ L+ A K + + ++M
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 249 NKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWM 308
G ++ TYN+L+N C+ RL A+ L M G +P+++T N +L C R
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 309 DAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVL 368
DA L+ +MV G P VTF LI+ L A+ ++++M + GC P+ ++Y V+
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 369 HGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCS 428
+G CK D A+ L M + ++V Y+T++ +LCK D A+ + ++ NK
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 429 PVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKL 488
P +ITY+++I L G+ A +LL +M + + P+ +T+S+L+ ++GK+ +A KL
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Query: 489 FHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAY 548
+ ++ + + PN+ TY+S++ G C + A +L M+ + C P TY LI G
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Query: 549 EGLAKEALDLLNQLCSRGVV 568
+ ++L ++ RG+V
Sbjct: 406 AKRVDKGMELFREMSQRGLV 425
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 118/217 (54%), Gaps = 3/217 (1%)
Query: 94 LVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPD 153
L G + + L M+ P+++ ++LI F K GK KA ++ E + P+
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 154 VITYNVLISGYC---RLGEIDNALQVLERMSVAPDVVTYNTILRTLCDSGKLNLAMEVLH 210
+ TY+ LI+G+C RLGE L+++ R P+VVTYNT++ C + +++ ME+
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417
Query: 211 KQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEG 270
+ ++ + +TYT LI + A + +M + G P+++TYN+L++G+CK G
Sbjct: 418 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 477
Query: 271 RLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRW 307
+L +A+ + +P++ T+NI++ MC G+W
Sbjct: 478 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%)
Query: 361 SLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 420
S Y VL + ++D AI +M +P I+ ++ LL+A+ K K D+ +
Sbjct: 43 SYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGE 102
Query: 421 QLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREG 480
++ S L TYN +I+ + + A+ LL +M G +PD +T +SL+ G
Sbjct: 103 KMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGN 162
Query: 481 KVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYT 540
++ +A+ L + +G +P+ +T+ +++ GL + A+ ++ MV R C+P TY
Sbjct: 163 RISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYG 222
Query: 541 ILIEGIAYEGLAKEALDLLNQL 562
++ G+ G AL+LLN++
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKM 244
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/496 (29%), Positives = 249/496 (50%), Gaps = 8/496 (1%)
Query: 88 NNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
N+ L L+ ++ + M G P++ L++ CK K A +++ + +
Sbjct: 150 NHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSN 209
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLERMSVAPDVVTYNTILRTLCDSGKLNLAME 207
G PD ++Y +IS C +G + ++ ER P V YN ++ LC A E
Sbjct: 210 KGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE--PVVSVYNALINGLCKEHDYKGAFE 267
Query: 208 VLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGIC 267
++ + +EK P+VI+Y+ LI C + A L +M +GC P++ T + LV G
Sbjct: 268 LMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCF 327
Query: 268 KEGRLDEAIKFLNDM-PSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSV 326
G +A+ N M +G QPNV+ +N +++ CS G + A + + M GCSP++
Sbjct: 328 LRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNI 387
Query: 327 VTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEI 386
T+ LIN ++G L A+ I KM GC PN + Y ++ C+ K A +EI
Sbjct: 388 RTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEI 447
Query: 387 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKH-CSPVLITYNTVIDGLSKVG 445
M C P + T+N + LC G++D A ++ Q+ +H C P ++TYN ++DGL+K
Sbjct: 448 MSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKAN 507
Query: 446 KTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYN 505
+ E+A L E+ +G++ + TY++L+ G G A++L + G P+ IT N
Sbjct: 508 RIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMN 567
Query: 506 SIMLGLCKARQTYRAIDILADMVT---RSCKPTEATYTILIEGIAYEGLAKEALDLLNQL 562
I+L CK + RA +L D+V+ R +P +YT +I G+ ++ + LL ++
Sbjct: 568 MIILAYCKQGKAERAAQML-DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERM 626
Query: 563 CSRGVVKKSSAEQVAV 578
S G+V + V +
Sbjct: 627 ISAGIVPSIATWSVLI 642
Score = 236 bits (603), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 136/467 (29%), Positives = 240/467 (51%), Gaps = 14/467 (2%)
Query: 85 FESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEI 144
F N L+ L +N +++ K L M G PD + T++I C+VG ++ + E
Sbjct: 182 FTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER 241
Query: 145 VEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGK 201
E P V YN LI+G C+ + A +++ M ++P+V++Y+T++ LC+SG+
Sbjct: 242 FE-----PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQ 296
Query: 202 LNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEM-RNKGCIPDVVTYN 260
+ LA L + L++ C+P++ T + L++ A+ L ++M R G P+VV YN
Sbjct: 297 IELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYN 356
Query: 261 VLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLK 320
LV G C G + +A+ + M GC PN+ T+ ++ G A + +M+
Sbjct: 357 TLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTS 416
Query: 321 GCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRA 380
GC P+VV + ++ LCR A ++E M K C P+ ++N + G C ++D A
Sbjct: 417 GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Query: 381 IEYLEIMVSRG-CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVID 439
+ M + C P+IVTYN LL L K +++ A + ++ + TYNT++
Sbjct: 477 EKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLH 536
Query: 440 GLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLG--- 496
G G A++L+ +M G PD IT + ++ ++GK + A ++ DL G
Sbjct: 537 GSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-DLVSCGRRK 595
Query: 497 VRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILI 543
RP+VI+Y +++ GLC++ + +L M++ P+ AT+++LI
Sbjct: 596 WRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 235/457 (51%), Gaps = 41/457 (8%)
Query: 160 LISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKE 216
+IS Y ++G + A+++ R+ P V YN +L TL ++ + + ++++ ++++
Sbjct: 117 VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQM-IYMVYRDMKRD 175
Query: 217 CY-PDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVT----------------- 258
+ P+V TY +L++A CK + V A KLL EM NKGC PD V+
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG 235
Query: 259 -------------YNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTG 305
YN L+NG+CKE A + + +M G PNVI+++ ++ +C++G
Sbjct: 236 RELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSG 295
Query: 306 RWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPK-HGCTPNSLSY 364
+ A L +M+ +GC P++ T + L+ +G A+D+ +M + G PN ++Y
Sbjct: 296 QIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAY 355
Query: 365 NPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSN 424
N ++ GFC + +A+ M GC P+I TY +L+ K G +D AV I N++
Sbjct: 356 NTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLT 415
Query: 425 KHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDE 484
C P ++ Y +++ L + K ++A L+E M + P T+++ + GL G++D
Sbjct: 416 SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDW 475
Query: 485 AIKLFHDLERLG-VRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILI 543
A K+F +E+ PN++TYN ++ GL KA + A + ++ R + + +TY L+
Sbjct: 476 AEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLL 535
Query: 544 EGIAYEGLAKEALDLLNQLCSRGVVKKSSAEQVAVKM 580
G GL AL QL + +V S +++ + M
Sbjct: 536 HGSCNAGLPGIAL----QLVGKMMVDGKSPDEITMNM 568
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 191/353 (54%), Gaps = 7/353 (1%)
Query: 94 LVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVM-EIVEDSGAVP 152
L +G++E F FL M+ G P+I +SL++G G T A + +++ G P
Sbjct: 291 LCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQP 350
Query: 153 DVITYNVLISGYCRLGEIDNALQV---LERMSVAPDVVTYNTILRTLCDSGKLNLAMEVL 209
+V+ YN L+ G+C G I A+ V +E + +P++ TY +++ G L+ A+ +
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIW 410
Query: 210 HKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKE 269
+K L C P+V+ YT ++EA C+ S +A L++ M + C P V T+N + G+C
Sbjct: 411 NKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDA 470
Query: 270 GRLDEAIKFLNDM-PSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVT 328
GRLD A K M + C PN++T+N +L + R +A L E+ ++G S T
Sbjct: 471 GRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSST 530
Query: 329 FNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMV 388
+N L++ C GL G A+ ++ KM G +P+ ++ N ++ +CK+ K +RA + L+++
Sbjct: 531 YNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVS 590
Query: 389 --SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVID 439
R PD+++Y ++ LC+ + V +L ++ + P + T++ +I+
Sbjct: 591 CGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 201/378 (53%), Gaps = 14/378 (3%)
Query: 187 VTYNTILRTLCDSGKLNLAMEVLHKQLEKE---CYPDVITYTILIEATCKESGVGQ-AMK 242
+T+ ++R L G+++ +++ L +Q++ + C D+ I + ++ G+ + A++
Sbjct: 77 LTFEVMIRKLAMDGQVD-SVQYLLQQMKLQGFHCSEDLFISVI---SVYRQVGLAERAVE 132
Query: 243 LLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMC 302
+ ++ GC P V YN +++ + E R+ DM G +PNV T+N++L+++C
Sbjct: 133 MFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALC 192
Query: 303 STGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSL 362
+ A++LL EM KGC P V++ +I+ +C GL+ ++ E+ P
Sbjct: 193 KNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVS 247
Query: 363 SYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL 422
YN +++G CKE A E + MV +G P++++Y+TL+ LC G++++A L Q+
Sbjct: 248 VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307
Query: 423 SNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEM-RTKGLKPDTITYSSLVGGLSREGK 481
+ C P + T ++++ G G T A+ L +M R GL+P+ + Y++LV G G
Sbjct: 308 LKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGN 367
Query: 482 VDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTI 541
+ +A+ +F +E +G PN+ TY S++ G K A+ I M+T C P YT
Sbjct: 368 IVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTN 427
Query: 542 LIEGIAYEGLAKEALDLL 559
++E + KEA L+
Sbjct: 428 MVEALCRHSKFKEAESLI 445
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 142/271 (52%), Gaps = 5/271 (1%)
Query: 292 ITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEK 351
+T +++R + G+ + LL +M L+G S F +I+ + GL RA+++ +
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 352 MPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGK 411
+ + GC P+ YN VL E ++ M G P++ TYN LL ALCK+ K
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 412 VDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSS 471
VD A ++L ++SNK C P ++Y TVI + +VG ++ +L E +P Y++
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVVSVYNA 251
Query: 472 LVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRS 531
L+ GL +E A +L ++ G+ PNVI+Y++++ LC + Q A L M+ R
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Query: 532 CKPTEATYTILIEGIAYEGLAKEALDLLNQL 562
C P T + L++G G +ALDL NQ+
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 16/233 (6%)
Query: 38 NRVFAISKVETLSFNVKMKHGEAFVQGHLNNGHISSGMENSSLNFEDFESNNHLRRLVRN 97
N V + VE L + K K E+ ++ I S EN + + F N ++ L
Sbjct: 421 NVVVYTNMVEALCRHSKFKEAESLIE-------IMSK-ENCAPSVPTF--NAFIKGLCDA 470
Query: 98 GELEEGFKFLESM-VYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVIT 156
G L+ K M H P+I+ L+ G K + +A + + G T
Sbjct: 471 GRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSST 530
Query: 157 YNVLISGYCRLGEIDNALQVLERMSV---APDVVTYNTILRTLCDSGKLNLAMEVLH--K 211
YN L+ G C G ALQ++ +M V +PD +T N I+ C GK A ++L
Sbjct: 531 YNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVS 590
Query: 212 QLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
++ PDVI+YT +I C+ + + LL+ M + G +P + T++VL+N
Sbjct: 591 CGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 74/159 (46%), Gaps = 7/159 (4%)
Query: 412 VDVAVEILNQLSN----KHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTI 467
V +A+ ++N KH +P +T+ +I L+ G+ + LL++M+ +G
Sbjct: 56 VPLALHFFKSIANSNLFKH-TP--LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSED 112
Query: 468 TYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADM 527
+ S++ + G + A+++F+ ++ G P+V YN ++ L + + DM
Sbjct: 113 LFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDM 172
Query: 528 VTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRG 566
+P TY +L++ + A LL ++ ++G
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG 211
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 238/421 (56%), Gaps = 3/421 (0%)
Query: 151 VPDVITYNVLISGYCRLGEIDNALQVLERMS---VAPDVVTYNTILRTLCDSGKLNLAME 207
+P + ++ L+S ++ + D + + E+M + ++ T N +L C +L+LA+
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 208 VLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGIC 267
L K ++ P ++T+ L+ C+ V A+ + D+M G P+VV YN +++G+C
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 268 KEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVV 327
K ++D A+ LN M G P+V+T+N ++ +CS+GRW DA R+++ M + P V
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 328 TFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIM 387
TFN LI+ ++G + A + E+M + P+ ++Y+ +++G C ++D A E M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 388 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKT 447
VS+GC+PD+VTY+ L+ CK KV+ +++ ++S + +TY +I G + GK
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377
Query: 448 EQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSI 507
A ++ M G+ P+ ITY+ L+ GL GK+++A+ + D+++ G+ +++TYN I
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII 437
Query: 508 MLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
+ G+CKA + A DI + + P TYT ++ G+ +GL +EA L ++ G+
Sbjct: 438 IRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGI 497
Query: 568 V 568
+
Sbjct: 498 L 498
Score = 246 bits (627), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 134/375 (35%), Positives = 208/375 (55%), Gaps = 3/375 (0%)
Query: 94 LVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPD 153
R +L FL M+ G P I+ SL+ GFC+ + A + + + G P+
Sbjct: 126 FCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPN 185
Query: 154 VITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLH 210
V+ YN +I G C+ ++DNAL +L RM + PDVVTYN+++ LC SG+ + A ++
Sbjct: 186 VVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVS 245
Query: 211 KQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEG 270
++E YPDV T+ LI+A KE V +A + +EM + PD+VTY++L+ G+C
Sbjct: 246 CMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYS 305
Query: 271 RLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFN 330
RLDEA + M S GC P+V+T++I++ C + + +L EM +G + VT+
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365
Query: 331 ILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSR 390
ILI CR G L A +I +M G PN ++YN +LHG C K+++A+ L M
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425
Query: 391 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQA 450
G DIVTYN ++ +CK G+V A +I L+ + P + TY T++ GL K G +A
Sbjct: 426 GMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREA 485
Query: 451 MKLLEEMRTKGLKPD 465
L +M+ G+ P+
Sbjct: 486 DALFRKMKEDGILPN 500
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 217/398 (54%), Gaps = 3/398 (0%)
Query: 106 FLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYC 165
E M G ++ C L+ FC+ + A + + G P ++T+ L++G+C
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162
Query: 166 RLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVI 222
R + +AL + ++M P+VV YNTI+ LC S +++ A+++L++ + PDV+
Sbjct: 163 RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVV 222
Query: 223 TYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDM 282
TY LI C A +++ M + PDV T+N L++ KEGR+ EA +F +M
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282
Query: 283 PSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLL 342
P+++T+++++ +C R +AE + MV KGC P VVT++ILIN C+ +
Sbjct: 283 IRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKV 342
Query: 343 GRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTL 402
+ + +M + G N+++Y ++ G+C+ K++ A E MV G +P+I+TYN L
Sbjct: 343 EHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVL 402
Query: 403 LTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGL 462
L LC +GK++ A+ IL + ++TYN +I G+ K G+ A + + +GL
Sbjct: 403 LHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGL 462
Query: 463 KPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPN 500
PD TY++++ GL ++G EA LF ++ G+ PN
Sbjct: 463 MPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 232/436 (53%), Gaps = 7/436 (1%)
Query: 85 FESNNHLRRLVRNG----ELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATR 140
+ + + R ++RNG +L++ MV +P I + L+ K+ K
Sbjct: 43 YSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIY 102
Query: 141 VMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLC 197
+ E ++ G ++ T N+L++ +CR ++ AL L +M P +VT+ ++L C
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC 162
Query: 198 DSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVV 257
++ A+ + + + P+V+ Y +I+ CK V A+ LL+ M G PDVV
Sbjct: 163 RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVV 222
Query: 258 TYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEM 317
TYN L++G+C GR +A + ++ M P+V T N ++ + GR +AE EM
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282
Query: 318 VLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKM 377
+ + P +VT+++LI LC L A ++ M GC P+ ++Y+ +++G+CK KK+
Sbjct: 283 IRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKV 342
Query: 378 DRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTV 437
+ ++ M RG + VTY L+ C+ GK++VA EI ++ P +ITYN +
Sbjct: 343 EHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVL 402
Query: 438 IDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGV 497
+ GL GK E+A+ +L +M+ G+ D +TY+ ++ G+ + G+V +A ++ L G+
Sbjct: 403 LHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGL 462
Query: 498 RPNVITYNSIMLGLCK 513
P++ TY ++MLGL K
Sbjct: 463 MPDIWTYTTMMLGLYK 478
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 203/415 (48%), Gaps = 35/415 (8%)
Query: 189 YNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMR 248
Y +LR KL+ ++++ ++ P + ++ L+ A K + L ++M+
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 249 NKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWM 308
G ++ T N+L+N C+ +L A+ FL M G +P+++T +L C R
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 309 DAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVL 368
DA + +MV G P+VV +N +I+ LC+ + A+D+L +M K G P+ ++YN ++
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 369 HGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKV---------------- 412
G C + A + M R YPD+ T+N L+ A K+G+V
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 413 -------------------DVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKL 453
D A E+ + +K C P ++TY+ +I+G K K E MKL
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 454 LEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCK 513
EM +G+ +T+TY+ L+ G R GK++ A ++F + GV PN+ITYN ++ GLC
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 514 ARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVV 568
+ +A+ ILADM TY I+I G+ G +A D+ L +G++
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLM 463
Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 176/323 (54%), Gaps = 3/323 (0%)
Query: 91 LRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGA 150
L R + + + MV G P+++ ++I G CK + A ++ +E G
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
Query: 151 VPDVITYNVLISGYCRLGEIDNALQVLERMS---VAPDVVTYNTILRTLCDSGKLNLAME 207
PDV+TYN LISG C G +A +++ M+ + PDV T+N ++ G+++ A E
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEE 277
Query: 208 VLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGIC 267
+ + + PD++TY++LI C S + +A ++ M +KGC PDVVTY++L+NG C
Sbjct: 278 FYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYC 337
Query: 268 KEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVV 327
K +++ +K +M G N +T+ I+++ C G+ AE + MV G P+++
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNII 397
Query: 328 TFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIM 387
T+N+L++ LC G + +A+ IL M K+G + ++YN ++ G CK ++ A + +
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457
Query: 388 VSRGCYPDIVTYNTLLTALCKDG 410
+G PDI TY T++ L K G
Sbjct: 458 NCQGLMPDIWTYTTMMLGLYKKG 480
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 3/311 (0%)
Query: 88 NNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
N + L ++ +++ L M G PD++ SLI G C G+ ATR++ +
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK 249
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNL 204
PDV T+N LI + G + A + E M S+ PD+VTY+ ++ LC +L+
Sbjct: 250 REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDE 309
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
A E+ + K C+PDV+TY+ILI CK V MKL EM +G + + VTY +L+
Sbjct: 310 AEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQ 369
Query: 265 GICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSP 324
G C+ G+L+ A + M G PN+IT+N++L +C G+ A +LA+M G
Sbjct: 370 GYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDA 429
Query: 325 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYL 384
+VT+NI+I +C+ G + A DI + G P+ +Y ++ G K+ A
Sbjct: 430 DIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALF 489
Query: 385 EIMVSRGCYPD 395
M G P+
Sbjct: 490 RKMKEDGILPN 500
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 173/319 (54%), Gaps = 1/319 (0%)
Query: 261 VLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLK 320
+L NGI + +LD+++ M P++ + +L ++ ++ L +M +
Sbjct: 52 MLRNGI-RFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML 110
Query: 321 GCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRA 380
G ++ T NIL+N CR L A+ L KM K G P+ +++ +L+GFC+ ++ A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 381 IEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDG 440
+ + MV G P++V YNT++ LCK +VD A+++LN++ P ++TYN++I G
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Query: 441 LSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPN 500
L G+ A +++ M + + PD T+++L+ +EG+V EA + + ++ R + P+
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
Query: 501 VITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLN 560
++TY+ ++ GLC + A ++ MV++ C P TY+ILI G + + L
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 561 QLCSRGVVKKSSAEQVAVK 579
++ RGVV+ + + ++
Sbjct: 351 EMSQRGVVRNTVTYTILIQ 369
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 151/302 (50%), Gaps = 9/302 (2%)
Query: 33 QKQRQNRVFAISKVETLSFNVKMKHGEAFVQGHLNNGHIS------SGMENSSLNFEDFE 86
KQ N + ++++E + + + G ++G S S M + + F
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 87 SNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVE 146
N + V+ G + E +F E M+ PDI+ + LI G C + +A + +
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 147 DSGAVPDVITYNVLISGYCRLGEIDNALQVLERMS---VAPDVVTYNTILRTLCDSGKLN 203
G PDV+TY++LI+GYC+ ++++ +++ MS V + VTY +++ C +GKLN
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 204 LAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLV 263
+A E+ + + +P++ITY +L+ C + +A+ +L +M+ G D+VTYN+++
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Query: 264 NGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCS 323
G+CK G + +A + G P++ T+ ++ + G +A+ L +M G
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Query: 324 PS 325
P+
Sbjct: 499 PN 500
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%)
Query: 360 NSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 419
N Y +L + K+D +++ MV P I ++ LL+A+ K K DV + +
Sbjct: 45 NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLW 104
Query: 420 NQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSRE 479
Q+ L T N +++ + + A+ L +M G +P +T+ SL+ G R
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164
Query: 480 GKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATY 539
+V +A+ +F + +G +PNV+ YN+I+ GLCK++Q A+D+L M P TY
Sbjct: 165 DRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTY 224
Query: 540 TILIEGIAYEGLAKEALDLLNQLCSRGV 567
LI G+ G +A +++ + R +
Sbjct: 225 NSLISGLCSSGRWSDATRMVSCMTKREI 252
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 87/179 (48%)
Query: 389 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTE 448
SR Y + Y +L + K+D ++++ + P + ++ ++ +SK+ K +
Sbjct: 39 SRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYD 98
Query: 449 QAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIM 508
+ L E+M+ G+ + T + L+ R ++ A+ + +LG P+++T+ S++
Sbjct: 99 VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158
Query: 509 LGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
G C+ + Y A+ + MV KP Y +I+G+ ALDLLN++ G+
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/406 (33%), Positives = 222/406 (54%), Gaps = 38/406 (9%)
Query: 180 MSVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQ 239
M+++P+ +++N +++ LC ++ A+EV E++C PD TY L++ CKE + +
Sbjct: 181 MNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDE 240
Query: 240 AMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILR 299
A+ LLDEM+++GC P V YNVL++G+CK+G L K +++M GC PN +T+N ++
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIH 300
Query: 300 SMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRK-------------------- 339
+C G+ A LL MV C P+ VT+ LIN L ++
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL 360
Query: 340 ---------------GLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYL 384
G A+ + KM + GC PN + Y+ ++ G C+E K + A E L
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420
Query: 385 EIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKV 444
M++ GC P+ TY++L+ K G + AV++ ++ CS Y+ +IDGL V
Sbjct: 421 NRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGV 480
Query: 445 GKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDL---ERLGVRPNV 501
G+ ++AM + +M T G+KPDT+ YSS++ GL G +D A+KL+H++ E +P+V
Sbjct: 481 GRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDV 540
Query: 502 ITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIA 547
+TYN ++ GLC + RA+D+L M+ R C P T + ++
Sbjct: 541 VTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLS 586
Score = 238 bits (608), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 244/448 (54%), Gaps = 8/448 (1%)
Query: 123 TSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM-- 180
+S+I + G +++ + V ++ V+ Y + D A+ + RM
Sbjct: 81 SSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVD 140
Query: 181 --SVAPDVVTYNTILRTLCDSGKLNLAME----VLHKQLEKECYPDVITYTILIEATCKE 234
V ++N++L + + G + +E V++ + P+ +++ ++I+A CK
Sbjct: 141 EFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKL 200
Query: 235 SGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITH 294
V +A+++ M + C+PD TY L++G+CKE R+DEA+ L++M S GC P+ + +
Sbjct: 201 RFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIY 260
Query: 295 NIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPK 354
N+++ +C G +L+ M LKGC P+ VT+N LI+ LC KG L +A+ +LE+M
Sbjct: 261 NVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVS 320
Query: 355 HGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDV 414
C PN ++Y +++G K+++ A+ L M RG + + Y+ L++ L K+GK +
Sbjct: 321 SKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEE 380
Query: 415 AVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVG 474
A+ + +++ K C P ++ Y+ ++DGL + GK +A ++L M G P+ TYSSL+
Sbjct: 381 AMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMK 440
Query: 475 GLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKP 534
G + G +EA++++ ++++ G N Y+ ++ GLC + A+ + + M+T KP
Sbjct: 441 GFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKP 500
Query: 535 TEATYTILIEGIAYEGLAKEALDLLNQL 562
Y+ +I+G+ G AL L +++
Sbjct: 501 DTVAYSSIIKGLCGIGSMDAALKLYHEM 528
Score = 226 bits (576), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 134/432 (31%), Positives = 228/432 (52%), Gaps = 8/432 (1%)
Query: 156 TYNVLISGYCRLGEIDNALQVLERMSVAPDVVTYNTILRTLCDSGKLNL---AMEVLHKQ 212
T + +I Y G+ D+ ++L R+ + V+ + + GK +L A+++ H+
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138
Query: 213 L-EKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKG----CIPDVVTYNVLVNGIC 267
+ E C V ++ ++ E + ++ D + N P+ +++N+++ +C
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198
Query: 268 KEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVV 327
K +D AI+ MP C P+ T+ ++ +C R +A LL EM +GCSPS V
Sbjct: 199 KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258
Query: 328 TFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIM 387
+N+LI+ LC+KG L R +++ M GC PN ++YN ++HG C + K+D+A+ LE M
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318
Query: 388 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKT 447
VS C P+ VTY TL+ L K + AV +L+ + + Y+ +I GL K GK
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKA 378
Query: 448 EQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSI 507
E+AM L +M KG KP+ + YS LV GL REGK +EA ++ + + G PN TY+S+
Sbjct: 379 EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSL 438
Query: 508 MLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
M G K A+ + +M C + Y++LI+G+ G KEA+ + +++ + G+
Sbjct: 439 MKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498
Query: 568 VKKSSAEQVAVK 579
+ A +K
Sbjct: 499 KPDTVAYSSIIK 510
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/508 (25%), Positives = 253/508 (49%), Gaps = 35/508 (6%)
Query: 71 ISSGMENSSLNFEDFESNNHL---------------RRLVRNGELEEGFKFLESMVYHGD 115
I+ G+ + L F D+ N+++ + L + ++ + M
Sbjct: 159 INEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKC 218
Query: 116 IPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQ 175
+PD +L+ G CK + +A +++ ++ G P + YNVLI G C+ G++ +
Sbjct: 219 LPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTK 278
Query: 176 VLERMSV---APDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATC 232
+++ M + P+ VTYNT++ LC GKL+ A+ +L + + +C P+ +TY LI
Sbjct: 279 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV 338
Query: 233 KESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVI 292
K+ A++LL M +G + Y+VL++G+ KEG+ +EA+ M GC+PN++
Sbjct: 339 KQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIV 398
Query: 293 THNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKM 352
+++++ +C G+ +A+ +L M+ GC P+ T++ L+ + GL A+ + ++M
Sbjct: 399 VYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEM 458
Query: 353 PKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKV 412
K GC+ N Y+ ++ G C ++ A+ M++ G PD V Y++++ LC G +
Sbjct: 459 DKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSM 518
Query: 413 DVAVEILNQL---SNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITY 469
D A+++ +++ P ++TYN ++DGL +A+ LL M +G PD IT
Sbjct: 519 DAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITC 578
Query: 470 SSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVT 529
++ + LS + + + F LE L VR L K ++ A I+ M+
Sbjct: 579 NTFLNTLSEKSNSCDKGRSF--LEELVVR------------LLKRQRVSGACTIVEVMLG 624
Query: 530 RSCKPTEATYTILIEGIAYEGLAKEALD 557
+ P +T+ +++ I A+D
Sbjct: 625 KYLAPKTSTWAMIVREICKPKKINAAID 652
Score = 38.9 bits (89), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 27/143 (18%)
Query: 98 GELEEGFKFLESMVYHGDI---PDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDV 154
G ++ K M+ + PD++ L+ G C +A ++ + D G PDV
Sbjct: 516 GSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDV 575
Query: 155 ITYNVLI------SGYCRLGE---------------IDNALQVLERM---SVAPDVVTYN 190
IT N + S C G + A ++E M +AP T+
Sbjct: 576 ITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWA 635
Query: 191 TILRTLCDSGKLNLAMEVLHKQL 213
I+R +C K+N A++ + L
Sbjct: 636 MIVREICKPKKINAAIDKCWRNL 658
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 253 bits (647), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/460 (30%), Positives = 238/460 (51%), Gaps = 22/460 (4%)
Query: 125 LIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---- 180
LI+ FC K + + G PDV+T+N L+ G C I AL + M
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 181 --------------SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTI 226
+ P V+T+NT++ LC G++ A +++K + K + DV+TY
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 227 LIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYG 286
++ CK A+ LL +M PDVV Y+ +++ +CK+G +A ++M G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 287 CQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAI 346
PNV T+N ++ CS GRW DA+RLL +M+ + +P V+TFN LI+ ++G L A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 347 DILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTAL 406
+ ++M P++++YN +++GFCK + D A ++M S PD+VT+NT++
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVY 442
Query: 407 CKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDT 466
C+ +VD +++L ++S + TYNT+I G +V A L +EM + G+ PDT
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 467 ITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILAD 526
IT + L+ G K++EA++LF ++ + + + YN I+ G+CK + A D+
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 562
Query: 527 MVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRG 566
+ +P TY ++I G + +A L +++ G
Sbjct: 563 LPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Score = 244 bits (623), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/470 (29%), Positives = 245/470 (52%), Gaps = 8/470 (1%)
Query: 94 LVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPD 153
+V G LE + MV G P +I +LI G C G+ +A ++ + G D
Sbjct: 202 MVETGFLE-AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 154 VITYNVLISGYCRLGEIDNALQVLERMS---VAPDVVTYNTILRTLCDSGKLNLAMEVLH 210
V+TY +++G C++G+ +AL +L +M + PDVV Y+ I+ LC G + A +
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 211 KQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEG 270
+ LEK P+V TY +I+ C A +LL +M + PDV+T+N L++ KEG
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 271 RLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFN 330
+L EA K ++M P+ +T+N ++ C R+ DA+ + M SP VVTFN
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFN 436
Query: 331 ILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSR 390
+I+ CR + + +L ++ + G N+ +YN ++HGFC+ ++ A + + M+S
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Query: 391 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQA 450
G PD +T N LL C++ K++ A+E+ + + YN +I G+ K K ++A
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 451 MKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLG 510
L + G++PD TY+ ++ G + + +A LFH ++ G P+ TYN+++ G
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Query: 511 LCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLN 560
KA + ++I+++++M + T ++ + I L K D+L+
Sbjct: 617 CLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDKSFSDMLS 666
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 219/419 (52%), Gaps = 7/419 (1%)
Query: 88 NNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
N + L G + E + MV G D++ +++ G CK+G T+ A ++ +E+
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNL 204
+ PDV+ Y+ +I C+ G +A + M +AP+V TYN ++ C G+ +
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
A +L +E+E PDV+T+ LI A+ KE + +A KL DEM ++ PD VTYN ++
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 265 GICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSP 324
G CK R D+A + M S P+V+T N I+ C R + +LL E+ +G
Sbjct: 410 GFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465
Query: 325 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYL 384
+ T+N LI+ C L A D+ ++M HG P++++ N +L+GFC+ +K++ A+E
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Query: 385 EIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKV 444
E++ D V YN ++ +CK KVD A ++ L P + TYN +I G
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585
Query: 445 GKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVIT 503
A L +M+ G +PD TY++L+ G + G++D++I+L ++ G + T
Sbjct: 586 SAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 214/420 (50%), Gaps = 22/420 (5%)
Query: 158 NVLISGYCRLGEIDNALQVLERMSV---APDVVTYNTILRTLCDSGKLNLAMEVLHKQLE 214
N +I + R+ D A+ + +M + ++ ++N +++ CD KL+ ++ K +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 215 KECYPDVITYTILIEATC---------------KESGVGQAMKLLDEMRNKGCIPDVVTY 259
PDV+T+ L+ C E+G +A+ L D+M G P V+T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 260 NVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVL 319
N L+NG+C EGR+ EA +N M G +V+T+ I+ MC G A LL++M
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 320 KGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDR 379
P VV ++ +I+ LC+ G A + +M + G PN +YN ++ GFC +
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 380 AIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVID 439
A L M+ R PD++T+N L++A K+GK+ A ++ +++ ++ P +TYN++I
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 440 GLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRP 499
G K + + A + + M + PD +T+++++ R +VDE ++L ++ R G+
Sbjct: 410 GFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465
Query: 500 NVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLL 559
N TYN+++ G C+ A D+ +M++ P T IL+ G +EAL+L
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 209/427 (48%), Gaps = 24/427 (5%)
Query: 160 LISGYCRLGEIDNALQVLERMSVAPDVVTY---NTILRTLCDSGKLNLAMEVLHKQLEKE 216
L SG +D+A+ + M + T N ++ + ++A+ L++++E
Sbjct: 77 LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAIS-LYRKMEIR 135
Query: 217 CYP-DVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLD-- 273
P ++ ++ ILI+ C + ++ ++ G PDVVT+N L++G+C E R+
Sbjct: 136 RIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEA 195
Query: 274 -------------EAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLK 320
EA+ + M G P VIT N ++ +C GR ++A L+ +MV K
Sbjct: 196 LALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK 255
Query: 321 GCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRA 380
G VVT+ ++N +C+ G A+++L KM + P+ + Y+ ++ CK+ A
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 381 IEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDG 440
M+ +G P++ TYN ++ C G+ A +L + + +P ++T+N +I
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 441 LSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPN 500
K GK +A KL +EM + + PDT+TY+S++ G + + D+A +F L P+
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD----LMASPD 431
Query: 501 VITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLN 560
V+T+N+I+ C+A++ + +L ++ R TY LI G A DL
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 561 QLCSRGV 567
++ S GV
Sbjct: 492 EMISHGV 498
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 158/329 (48%), Gaps = 20/329 (6%)
Query: 240 AMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILR 299
A+ L +M + ++ ++N+L+ C +L ++ + G QP+V+T N +L
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 300 SMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTP 359
+C R +A L MV G FL A+ + ++M + G TP
Sbjct: 185 GLCLEDRISEALALFGYMVETG-------------FL-------EAVALFDQMVEIGLTP 224
Query: 360 NSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 419
+++N +++G C E ++ A + MV +G + D+VTY T++ +CK G A+ +L
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284
Query: 420 NQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSRE 479
+++ H P ++ Y+ +ID L K G A L EM KG+ P+ TY+ ++ G
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 480 GKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATY 539
G+ +A +L D+ + P+V+T+N+++ K + + A + +M+ R P TY
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404
Query: 540 TILIEGIAYEGLAKEALDLLNQLCSRGVV 568
+I G +A + + + S VV
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMASPDVV 433
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%)
Query: 75 MENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGK 134
++ S ++ + N + + + +++E + S+ HG PD+ +I GFC
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 135 TRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM 180
A + ++D+G PD TYN LI G + GEID +++++ M
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 252 bits (643), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 150/502 (29%), Positives = 262/502 (52%), Gaps = 16/502 (3%)
Query: 94 LVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPD 153
L R +LE+ FL + + P ++ S++ G+CK+G A V G VP
Sbjct: 239 LCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPS 298
Query: 154 VITYNVLISGYCRLGEIDNALQVLERMS---VAPDVVTYNTILRTLCDSGKLNLAMEVLH 210
V ++N+LI+G C +G I AL++ M+ V PD VTYN + + G ++ A EV+
Sbjct: 299 VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR 358
Query: 211 KQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGC-IPDVVTYNVLVNGICKE 269
L+K PDVITYTIL+ C+ + + LL +M ++G + ++ +V+++G+CK
Sbjct: 359 DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKT 418
Query: 270 GRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTF 329
GR+DEA+ N M + G P+++ ++I++ +C G++ A L EM K P+ T
Sbjct: 419 GRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTH 478
Query: 330 NILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVS 389
L+ LC+KG+L A +L+ + G T + + YN V+ G+ K ++ A+E ++++
Sbjct: 479 GALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE 538
Query: 390 RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQ 449
G P + T+N+L+ CK + A +IL+ + +P +++Y T++D + G T+
Sbjct: 539 TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKS 598
Query: 450 AMKLLEEMRTKGLKPDTITYSSLVGGLSREGK------------VDEAIKLFHDLERLGV 497
+L EM+ +G+ P +TYS + GL R K ++ + D+E G+
Sbjct: 599 IDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGI 658
Query: 498 RPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALD 557
P+ ITYN+I+ LC+ + A L M +R+ + ATY ILI+ + G ++A
Sbjct: 659 PPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADS 718
Query: 558 LLNQLCSRGVVKKSSAEQVAVK 579
+ L + V A +K
Sbjct: 719 FIYSLQEQNVSLSKFAYTTLIK 740
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 203/381 (53%), Gaps = 1/381 (0%)
Query: 188 TYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEM 247
TY+T++ LC KL A+ L K+ P V+++ ++ CK V A +
Sbjct: 231 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 290
Query: 248 RNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRW 307
G +P V ++N+L+NG+C G + EA++ +DM +G +P+ +T+NI+ + G
Sbjct: 291 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 350
Query: 308 MDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNS-LSYNP 366
A ++ +M+ KG SP V+T+ IL+ C+ G + + +L+ M G NS + +
Sbjct: 351 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 410
Query: 367 VLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKH 426
+L G CK ++D A+ M + G PD+V Y+ ++ LCK GK D+A+ + +++ +K
Sbjct: 411 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 470
Query: 427 CSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAI 486
P T+ ++ GL + G +A LL+ + + G D + Y+ ++ G ++ G ++EA+
Sbjct: 471 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 530
Query: 487 KLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGI 546
+LF + G+ P+V T+NS++ G CK + A IL + P+ +YT L++
Sbjct: 531 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 590
Query: 547 AYEGLAKEALDLLNQLCSRGV 567
A G K +L ++ + G+
Sbjct: 591 ANCGNTKSIDELRREMKAEGI 611
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 203/420 (48%), Gaps = 16/420 (3%)
Query: 98 GELEEGFKFLESMVYHG-DIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVIT 156
G ++ G L+ M+ G ++ IIPC+ ++ G CK G+ +A + ++ G PD++
Sbjct: 383 GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVA 442
Query: 157 YNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQL 213
Y+++I G C+LG+ D AL + + M + P+ T+ +L LC G L A +L +
Sbjct: 443 YSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 502
Query: 214 EKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLD 273
D++ Y I+I+ K + +A++L + G P V T+N L+ G CK +
Sbjct: 503 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 562
Query: 274 EAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILI 333
EA K L+ + YG P+V+++ ++ + + G + L EM +G P+ VT++++
Sbjct: 563 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIF 622
Query: 334 NFLCR------------KGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAI 381
LCR + + + L M G P+ ++YN ++ C+ K + A
Sbjct: 623 KGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF 682
Query: 382 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGL 441
+LEIM SR TYN L+ +LC G + A + L ++ S Y T+I
Sbjct: 683 VFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAH 742
Query: 442 SKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNV 501
G E A+KL ++ +G YS+++ L R V+E+ F + G+ P++
Sbjct: 743 CVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDL 802
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 221/488 (45%), Gaps = 51/488 (10%)
Query: 98 GELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITY 157
G + E + M HG PD + L +GF +G A V+ + D G PDVITY
Sbjct: 313 GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITY 372
Query: 158 NVLISGYCRLGEIDNALQVLERM------------------------------------- 180
+L+ G C+LG ID L +L+ M
Sbjct: 373 TILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK 432
Query: 181 --SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVG 238
++PD+V Y+ ++ LC GK ++A+ + + +K P+ T+ L+ C++ +
Sbjct: 433 ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLL 492
Query: 239 QAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIIL 298
+A LLD + + G D+V YN++++G K G ++EA++ + G P+V T N ++
Sbjct: 493 EARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 552
Query: 299 RSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCT 358
C T +A ++L + L G +PSVV++ L++ G ++ +M G
Sbjct: 553 YGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIP 612
Query: 359 PNSLSYNPVLHGFCK------------EKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTAL 406
P +++Y+ + G C+ E+ ++ + L M S G PD +TYNT++ L
Sbjct: 613 PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYL 672
Query: 407 CKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDT 466
C+ + A L + +++ TYN +ID L G +A + ++ + +
Sbjct: 673 CRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSK 732
Query: 467 ITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILAD 526
Y++L+ +G + A+KLFH L G ++ Y++++ LC+ +
Sbjct: 733 FAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCL 792
Query: 527 MVTRSCKP 534
M+++ P
Sbjct: 793 MLSQGISP 800
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 175/346 (50%), Gaps = 8/346 (2%)
Query: 222 ITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLND 281
+ + +L+ + + V ++ +L +M+++ +YN ++ + ++ + K + D
Sbjct: 167 LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD 226
Query: 282 MPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGL 341
N T++ ++ +C + DA L K PSVV+FN +++ C+ G
Sbjct: 227 -------KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGF 279
Query: 342 LGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNT 401
+ A + K G P+ S+N +++G C + A+E M G PD VTYN
Sbjct: 280 VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNI 339
Query: 402 LLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKG 461
L G + A E++ + +K SP +ITY ++ G ++G + + LL++M ++G
Sbjct: 340 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 399
Query: 462 LKPDTITYSS-LVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRA 520
+ ++I S ++ GL + G++DEA+ LF+ ++ G+ P+++ Y+ ++ GLCK + A
Sbjct: 400 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 459
Query: 521 IDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRG 566
+ + +M + P T+ L+ G+ +G+ EA LL+ L S G
Sbjct: 460 LWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSG 505
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 122/236 (51%), Gaps = 1/236 (0%)
Query: 344 RAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLL 403
R D + + K N +Y+ V+ G C+++K++ A+ +L + P +V++N+++
Sbjct: 212 RETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIM 271
Query: 404 TALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLK 463
+ CK G VD+A + P + ++N +I+GL VG +A++L +M G++
Sbjct: 272 SGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVE 331
Query: 464 PDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDI 523
PD++TY+ L G G + A ++ D+ G+ P+VITY ++ G C+ + +
Sbjct: 332 PDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVL 391
Query: 524 LADMVTRSCKPTEAT-YTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSSAEQVAV 578
L DM++R + ++++ G+ G EAL L NQ+ + G+ A + +
Sbjct: 392 LKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVI 447
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 107/253 (42%), Gaps = 15/253 (5%)
Query: 96 RNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVI 155
+ + E K L+ + +G P ++ T+L+ + G T+ + ++ G P +
Sbjct: 557 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 616
Query: 156 TYNVLISGYCRLGEIDNALQVL---------------ERMSVAPDVVTYNTILRTLCDSG 200
TY+V+ G CR + +N VL E + PD +TYNTI++ LC
Sbjct: 617 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 676
Query: 201 KLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYN 260
L+ A L + TY ILI++ C + +A + ++ + Y
Sbjct: 677 HLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYT 736
Query: 261 VLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLK 320
L+ C +G + A+K + + G ++ ++ ++ +C +++ M+ +
Sbjct: 737 TLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQ 796
Query: 321 GCSPSVVTFNILI 333
G SP + ++I
Sbjct: 797 GISPDLDICEVMI 809
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 18/216 (8%)
Query: 110 MVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVME------------IVEDSGAVPDVITY 157
M G P + + + +G C+ K V+ +E G PD ITY
Sbjct: 606 MKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITY 665
Query: 158 NVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLE 214
N +I CR+ + A LE M ++ TYN ++ +LC G + A ++ E
Sbjct: 666 NTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQE 725
Query: 215 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDE 274
+ YT LI+A C + A+KL ++ ++G + Y+ ++N +C+ ++E
Sbjct: 726 QNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNE 785
Query: 275 AIKFLNDMPSYGCQPNVITHNIILRS---MCSTGRW 307
+ F M S G P++ ++++S + T +W
Sbjct: 786 SKFFFCLMLSQGISPDLDICEVMIKSDELLSWTIKW 821
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 91/183 (49%), Gaps = 7/183 (3%)
Query: 397 VTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEE 456
+ ++ LL + VD ++ IL ++ +++ + +YN+V L +T++ + +E
Sbjct: 167 LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSV---LYHFRETDKMWDVYKE 223
Query: 457 MRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQ 516
++ K + TYS++V GL R+ K+++A+ E + P+V+++NSIM G CK
Sbjct: 224 IKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGF 279
Query: 517 TYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSSAEQV 576
A ++ P+ ++ ILI G+ G EAL+L + + GV S +
Sbjct: 280 VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNI 339
Query: 577 AVK 579
K
Sbjct: 340 LAK 342
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 251 bits (642), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 149/484 (30%), Positives = 244/484 (50%), Gaps = 9/484 (1%)
Query: 85 FESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEI 144
+ N + L+++ E + M+ G P + +SL+ G +GK R VM +
Sbjct: 189 YSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVG---LGKRRDIDSVMGL 245
Query: 145 V---EDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCD 198
+ E G P+V T+ + I R G+I+ A ++L+RM PDVVTY ++ LC
Sbjct: 246 LKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCT 305
Query: 199 SGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVT 258
+ KL+ A EV K PD +TY L++ + + EM G +PDVVT
Sbjct: 306 ARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVT 365
Query: 259 YNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMV 318
+ +LV+ +CK G EA L+ M G PN+ T+N ++ + R DA L M
Sbjct: 366 FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNME 425
Query: 319 LKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMD 378
G P+ T+ + I++ + G A++ EKM G PN ++ N L+ K +
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485
Query: 379 RAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVI 438
A + + G PD VTYN ++ K G++D A+++L+++ C P +I N++I
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545
Query: 439 DGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVR 498
+ L K + ++A K+ M+ LKP +TY++L+ GL + GK+ EAI+LF + + G
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 605
Query: 499 PNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDL 558
PN IT+N++ LCK + A+ +L M+ C P TY +I G+ G KEA+
Sbjct: 606 PNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCF 665
Query: 559 LNQL 562
+Q+
Sbjct: 666 FHQM 669
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 154/513 (30%), Positives = 259/513 (50%), Gaps = 42/513 (8%)
Query: 106 FLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYC 165
L+ M G P++ T IR + GK +A +++ ++D G PDV+TY VLI C
Sbjct: 245 LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALC 304
Query: 166 RLGEIDNALQVLERMSVA---PDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECY-PDV 221
++D A +V E+M PD VTY T+L D+ L+ +++ ++EK+ + PDV
Sbjct: 305 TARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLD-SVKQFWSEMEKDGHVPDV 363
Query: 222 ITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLND 281
+T+TIL++A CK G+A LD MR++G +P++ TYN L+ G+ + RLD+A++ +
Sbjct: 364 VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGN 423
Query: 282 MPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGL 341
M S G +P T+ + + +G + A +M KG +P++V N + L + G
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483
Query: 342 LGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDI----- 396
A I + G P+S++YN ++ + K ++D AI+ L M+ GC PD+
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543
Query: 397 ------------------------------VTYNTLLTALCKDGKVDVAVEILNQLSNKH 426
VTYNTLL L K+GK+ A+E+ + K
Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Query: 427 CSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAI 486
C P IT+NT+ D L K + A+K+L +M G PD TY++++ GL + G+V EA+
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 663
Query: 487 KLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSC-KPTEATYTILIEG 545
FH +++L V P+ +T +++ G+ KA A I+ + + +P + LI
Sbjct: 664 CFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGS 722
Query: 546 IAYEGLAKEALDLLNQLCSRGVVKKSSAEQVAV 578
I E A+ +L + G+ + + V +
Sbjct: 723 ILAEAGIDNAVSFSERLVANGICRDGDSILVPI 755
Score = 223 bits (567), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 142/467 (30%), Positives = 236/467 (50%), Gaps = 17/467 (3%)
Query: 85 FESNNHLRRLVRNGELEEGFKFLESM---VYHGDIPDIIPCTSLIRGFCKVGKTRKATRV 141
F N + LV+NG+++E F M VY PD + +L+ G K A ++
Sbjct: 644 FTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY----PDFVTLCTLLPGVVKASLIEDAYKI 699
Query: 142 M-EIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERMSVAPDVVTYNTIL----RTL 196
+ + + P + + LI IDNA+ ER+ ++IL R
Sbjct: 700 ITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYS 759
Query: 197 CDSGKLNLAMEVLHKQLEKE--CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIP 254
C ++ A L ++ K+ P + TY +LI + + A + ++++ GCIP
Sbjct: 760 CKHNNVSGA-RTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818
Query: 255 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLL 314
DV TYN L++ K G++DE + +M ++ C+ N ITHNI++ + G DA L
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 315 AEMVL-KGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCK 373
+++ + SP+ T+ LI+ L + G L A + E M +GC PN YN +++GF K
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 374 EKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLIT 433
+ D A + MV G PD+ TY+ L+ LC G+VD + +L +P ++
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998
Query: 434 YNTVIDGLSKVGKTEQAMKLLEEMRT-KGLKPDTITYSSLVGGLSREGKVDEAIKLFHDL 492
YN +I+GL K + E+A+ L EM+T +G+ PD TY+SL+ L G V+EA K+++++
Sbjct: 999 YNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1058
Query: 493 ERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATY 539
+R G+ PNV T+N+++ G + + A + MVT P TY
Sbjct: 1059 QRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 151/511 (29%), Positives = 252/511 (49%), Gaps = 20/511 (3%)
Query: 70 HISSGMENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGF 129
I G+++ L + N ++ + GE++E K L M+ +G PD+I SLI
Sbjct: 489 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTL 548
Query: 130 CKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDV 186
K + +A ++ +++ P V+TYN L++G + G+I A+++ E M P+
Sbjct: 549 YKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNT 608
Query: 187 VTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDE 246
+T+NT+ LC + ++ LA+++L K ++ C PDV TY +I K V +AM +
Sbjct: 609 ITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ 668
Query: 247 MRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGC--QP-NVITHNIILRSMCS 303
M+ K PD VT L+ G+ K +++A K + + Y C QP N+ ++I +
Sbjct: 669 MK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNF-LYNCADQPANLFWEDLIGSILAE 726
Query: 304 TGRWMD-----AERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKH-GC 357
G +D +ERL+A + + +V +I + C+ + A + EK K G
Sbjct: 727 AG--IDNAVSFSERLVANGICRDGDSILVP---IIRYSCKHNNVSGARTLFEKFTKDLGV 781
Query: 358 TPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 417
P +YN ++ G + ++ A + + S GC PD+ TYN LL A K GK+D E
Sbjct: 782 QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFE 841
Query: 418 ILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEE-MRTKGLKPDTITYSSLVGGL 476
+ ++S C IT+N VI GL K G + A+ L + M + P TY L+ GL
Sbjct: 842 LYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGL 901
Query: 477 SREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTE 536
S+ G++ EA +LF + G RPN YN ++ G KA + A + MV +P
Sbjct: 902 SKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 961
Query: 537 ATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
TY++L++ + G E L +L G+
Sbjct: 962 KTYSVLVDCLCMVGRVDEGLHYFKELKESGL 992
Score = 202 bits (514), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 137/522 (26%), Positives = 248/522 (47%), Gaps = 44/522 (8%)
Query: 88 NNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
N L L +NG+++E + E MV G P+ I +L CK + A +++ + D
Sbjct: 577 NTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD 636
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLERMS--VAPDVVTYNTILRTLCDSGKLNLA 205
G VPDV TYN +I G + G++ A+ +M V PD VT T+L + + + A
Sbjct: 637 MGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDA 696
Query: 206 MEVLHK-------QLEKECYPDVITYTILIEA---------------------------- 230
+++ Q + D+I +IL EA
Sbjct: 697 YKIITNFLYNCADQPANLFWEDLIG-SILAEAGIDNAVSFSERLVANGICRDGDSILVPI 755
Query: 231 ---TCKESGVGQAMKLLDEM-RNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYG 286
+CK + V A L ++ ++ G P + TYN+L+ G+ + ++ A + S G
Sbjct: 756 IRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG 815
Query: 287 CQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAI 346
C P+V T+N +L + +G+ + L EM C + +T NI+I+ L + G + A+
Sbjct: 816 CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDAL 875
Query: 347 DIL-EKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTA 405
D+ + M +P + +Y P++ G K ++ A + E M+ GC P+ YN L+
Sbjct: 876 DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Query: 406 LCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPD 465
K G+ D A + ++ + P L TY+ ++D L VG+ ++ + +E++ GL PD
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995
Query: 466 TITYSSLVGGLSREGKVDEAIKLFHDLE-RLGVRPNVITYNSIMLGLCKARQTYRAIDIL 524
+ Y+ ++ GL + +++EA+ LF++++ G+ P++ TYNS++L L A A I
Sbjct: 996 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1055
Query: 525 ADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRG 566
++ +P T+ LI G + G + A + + + G
Sbjct: 1056 NEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG 1097
Score = 192 bits (488), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 129/483 (26%), Positives = 222/483 (45%), Gaps = 38/483 (7%)
Query: 122 CTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERM- 180
C ++ GK + V ++++ D TY + G + A L +M
Sbjct: 121 CNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMR 180
Query: 181 --SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVG 238
+ +YN ++ L S AMEV + + + P + TY+ L+ K +
Sbjct: 181 EFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDID 240
Query: 239 QAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIIL 298
M LL EM G P+V T+ + + + + G+++EA + L M GC P+V+T+ +++
Sbjct: 241 SVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLI 300
Query: 299 RSMCS---------------TGRW-------------------MDA-ERLLAEMVLKGCS 323
++C+ TGR +D+ ++ +EM G
Sbjct: 301 DALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV 360
Query: 324 PSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEY 383
P VVTF IL++ LC+ G G A D L+ M G PN +YN ++ G + ++D A+E
Sbjct: 361 PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEL 420
Query: 384 LEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSK 443
M S G P TY + K G A+E ++ K +P ++ N + L+K
Sbjct: 421 FGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAK 480
Query: 444 VGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVIT 503
G+ +A ++ ++ GL PD++TY+ ++ S+ G++DEAIKL ++ G P+VI
Sbjct: 481 AGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIV 540
Query: 504 YNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLC 563
NS++ L KA + A + M KPT TY L+ G+ G +EA++L +
Sbjct: 541 VNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMV 600
Query: 564 SRG 566
+G
Sbjct: 601 QKG 603
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 189/383 (49%), Gaps = 13/383 (3%)
Query: 100 LEEGFKFLESMVYHGDIPD----IIPCTSLIRGFCKVGKTRKATRVME-IVEDSGAVPDV 154
++ F E +V +G D ++P +IR CK A + E +D G P +
Sbjct: 729 IDNAVSFSERLVANGICRDGDSILVP---IIRYSCKHNNVSGARTLFEKFTKDLGVQPKL 785
Query: 155 ITYNVLISGYCRLGEIDNALQVLERMSVA---PDVVTYNTILRTLCDSGKLNLAMEVLHK 211
TYN+LI G I+ A V ++ PDV TYN +L SGK++ E+ +
Sbjct: 786 PTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKE 845
Query: 212 QLEKECYPDVITYTILIEATCKESGVGQAMKLL-DEMRNKGCIPDVVTYNVLVNGICKEG 270
EC + IT+ I+I K V A+ L D M ++ P TY L++G+ K G
Sbjct: 846 MSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSG 905
Query: 271 RLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFN 330
RL EA + M YGC+PN +NI++ G A L MV +G P + T++
Sbjct: 906 RLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYS 965
Query: 331 ILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRA-IEYLEIMVS 389
+L++ LC G + + +++ + G P+ + YN +++G K +++ A + + E+ S
Sbjct: 966 VLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTS 1025
Query: 390 RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQ 449
RG PD+ TYN+L+ L G V+ A +I N++ P + T+N +I G S GK E
Sbjct: 1026 RGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEH 1085
Query: 450 AMKLLEEMRTKGLKPDTITYSSL 472
A + + M T G P+T TY L
Sbjct: 1086 AYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 216/465 (46%), Gaps = 4/465 (0%)
Query: 106 FLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDS-GAVPDVITYNVLISGY 164
F SM+ PD+ + RG T + + V + V T N ++
Sbjct: 69 FSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEAL 128
Query: 165 ---CRLGEIDNALQVLERMSVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDV 221
+L E+ ++++ + D TY TI ++L G L A L K E +
Sbjct: 129 RVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNA 188
Query: 222 ITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLND 281
+Y LI K +AM++ M +G P + TY+ L+ G+ K +D + L +
Sbjct: 189 YSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKE 248
Query: 282 MPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGL 341
M + G +PNV T I +R + G+ +A +L M +GC P VVT+ +LI+ LC
Sbjct: 249 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308
Query: 342 LGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNT 401
L A ++ EKM P+ ++Y +L F + +D ++ M G PD+VT+
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368
Query: 402 LLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKG 461
L+ ALCK G A + L+ + ++ P L TYNT+I GL +V + + A++L M + G
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428
Query: 462 LKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAI 521
+KP TY + + G A++ F ++ G+ PN++ N+ + L KA + A
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 488
Query: 522 DILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRG 566
I + P TY ++++ + G EA+ LL+++ G
Sbjct: 489 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Score = 159 bits (401), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 206/435 (47%), Gaps = 10/435 (2%)
Query: 152 PDVITYNVLISGYCRLGEIDNALQVLERMSVAPDVV----TYNTILRTLCDSGKLNLAME 207
PD+ + + G + D++ + ++ ++V T N +L L GKL
Sbjct: 80 PDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAY 139
Query: 208 VLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGIC 267
V ++ D TY + ++ + G+ QA L +MR G + + +YN L++ +
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199
Query: 268 KEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAER---LLAEMVLKGCSP 324
K EA++ M G +P++ T++ + M G+ D + LL EM G P
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSL---MVGLGKRRDIDSVMGLLKEMETLGLKP 256
Query: 325 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYL 384
+V TF I I L R G + A +IL++M GC P+ ++Y ++ C +K+D A E
Sbjct: 257 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF 316
Query: 385 EIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKV 444
E M + PD VTY TLL + +D + +++ P ++T+ ++D L K
Sbjct: 317 EKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKA 376
Query: 445 GKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITY 504
G +A L+ MR +G+ P+ TY++L+ GL R ++D+A++LF ++E LGV+P TY
Sbjct: 377 GNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTY 436
Query: 505 NSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCS 564
+ K+ + A++ M T+ P + +A G +EA + L
Sbjct: 437 IVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 496
Query: 565 RGVVKKSSAEQVAVK 579
G+V S + +K
Sbjct: 497 IGLVPDSVTYNMMMK 511
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 126/246 (51%), Gaps = 5/246 (2%)
Query: 94 LVRNGELEEGFKFLESMVYHGDI-PDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVP 152
LV+ G +++ ++ D P LI G K G+ +A ++ E + D G P
Sbjct: 865 LVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP 924
Query: 153 DVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVL 209
+ YN+LI+G+ + GE D A + +RM V PD+ TY+ ++ LC G+++ +
Sbjct: 925 NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 984
Query: 210 HKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMR-NKGCIPDVVTYNVLVNGICK 268
+ E PDV+ Y ++I K + +A+ L +EM+ ++G PD+ TYN L+ +
Sbjct: 985 KELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGI 1044
Query: 269 EGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVT 328
G ++EA K N++ G +PNV T N ++R +G+ A + MV G SP+ T
Sbjct: 1045 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Query: 329 FNILIN 334
+ L N
Sbjct: 1105 YEQLPN 1110
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 251 bits (640), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 246/452 (54%), Gaps = 15/452 (3%)
Query: 105 KFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED-------SGAVPDVITY 157
KFL + P I+P S G + T++++ +E D S +P ++ +
Sbjct: 15 KFLNLCLLQKGNPVIVPFISRFWG--RTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDF 72
Query: 158 NVLISGYCRLGEIDNALQVLERMSV---APDVVTYNTILRTLCDSGKLNLAMEVLHKQLE 214
+ ++S + D + + M V D+ +YN ++ LC + +A+ V+ K ++
Sbjct: 73 SKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMK 132
Query: 215 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDE 274
PDV+T + LI C+ + V A+ L+ +M G PDVV YN +++G CK G +++
Sbjct: 133 FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVND 192
Query: 275 AIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILIN 334
A++ + M G + + +T+N ++ +C +GRW DA RL+ +MV++ P+V+TF +I+
Sbjct: 193 AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 252
Query: 335 FLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYP 394
++G A+ + E+M + P+ +YN +++G C ++D A + L++MV++GC P
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 395 DIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLL 454
D+VTYNTL+ CK +VD ++ +++ + ITYNT+I G + G+ + A ++
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 455 EEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKA 514
M + +P+ TYS L+ GL +V++A+ LF ++++ + ++ TYN ++ G+CK
Sbjct: 373 SRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKI 429
Query: 515 RQTYRAIDILADMVTRSCKPTEATYTILIEGI 546
A D+ + + KP +YT +I G
Sbjct: 430 GNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
Score = 236 bits (602), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 132/423 (31%), Positives = 227/423 (53%), Gaps = 12/423 (2%)
Query: 100 LEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEI---VEDSGAVPDVIT 156
LEE M+ +P I+ + ++ K+ K++ V+ + +E G D+ +
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLS---KIAKSKNYDLVISLFHHMEVCGIGHDLYS 106
Query: 157 YNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQL 213
YN++I+ CR AL V+ +M PDVVT ++++ C ++ A++++ K
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 214 EKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLD 273
E PDV+ Y +I+ +CK V A++L D M G D VTYN LV G+C GR
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 274 EAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILI 333
+A + + DM PNVIT ++ G++ +A +L EM + P V T+N LI
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 334 NFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCY 393
N LC G + A +L+ M GC P+ ++YN +++GFCK K++D + M RG
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Query: 394 PDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKL 453
D +TYNT++ + G+ D A EI +++ ++ P + TY+ ++ GL + E+A+ L
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVL 403
Query: 454 LEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCK 513
E M+ ++ D TY+ ++ G+ + G V++A LF L G++P+V++Y +++ G C+
Sbjct: 404 FENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Query: 514 ARQ 516
RQ
Sbjct: 464 KRQ 466
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 203/358 (56%), Gaps = 6/358 (1%)
Query: 110 MVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGE 169
M+ G PD++ +SLI GFC+ + A ++ +E+ G PDV+ YN +I G C++G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 170 IDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTI 226
+++A+++ +RM V D VTYN+++ LC SG+ + A ++ + ++ P+VIT+T
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 227 LIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYG 286
+I+ KE +AMKL +EM + PDV TYN L+NG+C GR+DEA + L+ M + G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 287 CQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAI 346
C P+V+T+N ++ C + R + +L EM +G +T+N +I + G A
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Query: 347 DILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTAL 406
+I +M PN +Y+ +L+G C ++++A+ E M DI TYN ++ +
Sbjct: 370 EIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 426
Query: 407 CKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKP 464
CK G V+ A ++ LS K P +++Y T+I G + + +++ L +M+ GL P
Sbjct: 427 CKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 216 bits (549), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 200/384 (52%), Gaps = 3/384 (0%)
Query: 184 PDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKL 243
P +V ++ +L + S +L + + H D+ +Y I+I C+ S A+ +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 244 LDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCS 303
+ +M G PDVVT + L+NG C+ R+ +AI ++ M G +P+V+ +N I+ C
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 304 TGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLS 363
G DA L M G VT+N L+ LC G A ++ M PN ++
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 364 YNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS 423
+ V+ F KE K A++ E M R PD+ TYN+L+ LC G+VD A ++L+ +
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 424 NKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVD 483
K C P ++TYNT+I+G K + ++ KL EM +GL DTITY++++ G + G+ D
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 484 EAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILI 543
A ++F R+ RPN+ TY+ ++ GLC + +A+ + +M + TY I+I
Sbjct: 367 AAQEIF---SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423
Query: 544 EGIAYEGLAKEALDLLNQLCSRGV 567
G+ G ++A DL L +G+
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCKGL 447
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 170/320 (53%)
Query: 253 IPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAER 312
+P +V ++ +++ I K D I + M G ++ ++NI++ +C R++ A
Sbjct: 66 LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 313 LLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFC 372
++ +M+ G P VVT + LIN C+ + AID++ KM + G P+ + YN ++ G C
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 373 KEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLI 432
K ++ A+E + M G D VTYN+L+ LC G+ A ++ + + P +I
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 433 TYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDL 492
T+ VID K GK +AMKL EEM + + PD TY+SL+ GL G+VDEA ++ +
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 493 ERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLA 552
G P+V+TYN+++ G CK+++ + +M R TY +I+G G
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 553 KEALDLLNQLCSRGVVKKSS 572
A ++ +++ SR ++ S
Sbjct: 366 DAAQEIFSRMDSRPNIRTYS 385
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 156/297 (52%)
Query: 272 LDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNI 331
L+E I M P+++ + +L + + + L M + G + ++NI
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 332 LINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRG 391
+IN LCR A+ ++ KM K G P+ ++ + +++GFC+ ++ AI+ + M G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 392 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAM 451
PD+V YNT++ CK G V+ AVE+ +++ +TYN+++ GL G+ A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 452 KLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGL 511
+L+ +M + + P+ IT+++++ +EGK EA+KL+ ++ R V P+V TYNS++ GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 512 CKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVV 568
C + A +L MVT+ C P TY LI G E L ++ RG+V
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 124/234 (52%), Gaps = 6/234 (2%)
Query: 94 LVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPD 153
V+ G+ E K E M PD+ SLI G C G+ +A ++++++ G +PD
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 313
Query: 154 VITYNVLISGYCRLGEIDNALQVLERMS---VAPDVVTYNTILRTLCDSGKLNLAMEVLH 210
V+TYN LI+G+C+ +D ++ M+ + D +TYNTI++ +G+ + A E+
Sbjct: 314 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 373
Query: 211 KQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEG 270
+ + P++ TY+IL+ C V +A+ L + M+ D+ TYN++++G+CK G
Sbjct: 374 RM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 430
Query: 271 RLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSP 324
+++A + G +P+V+++ ++ C +W ++ L +M G P
Sbjct: 431 NVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%)
Query: 85 FESNNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEI 144
F N+ + L +G ++E + L+ MV G +PD++ +LI GFCK + + T++
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 145 VEDSGAVPDVITYNVLISGYCRLGEIDNALQVLERMSVAPDVVTYNTILRTLCDSGKLNL 204
+ G V D ITYN +I GY + G D A ++ RM P++ TY+ +L LC + ++
Sbjct: 340 MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEK 399
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
A+ + + E D+ TY I+I CK V A L + KG PDVV+Y +++
Sbjct: 400 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459
Query: 265 GICKEGRLDEAIKFLNDMPSYGCQP 289
G C++ + D++ M G P
Sbjct: 460 GFCRKRQWDKSDLLYRKMQEDGLLP 484
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 248 bits (634), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 147/477 (30%), Positives = 244/477 (51%), Gaps = 7/477 (1%)
Query: 94 LVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPD 153
L + + + + + M+ +P +I +LI G+CK G K+ +V E ++ P
Sbjct: 224 LCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPS 283
Query: 154 VITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLH 210
+IT+N L+ G + G +++A VL+ M PD T++ + + K A+ V
Sbjct: 284 LITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYE 343
Query: 211 KQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEG 270
++ + T +IL+ A CKE + +A ++L KG +P+ V YN +++G C++G
Sbjct: 344 TAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKG 403
Query: 271 RLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFN 330
L A + M G +P+ + +N ++R C G +AE+ + +M LKG SPSV T+N
Sbjct: 404 DLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYN 463
Query: 331 ILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSR 390
ILI RK + DIL++M +G PN +SY +++ CK K+ A M R
Sbjct: 464 ILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDR 523
Query: 391 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQA 450
G P + YN L+ C GK++ A ++ K L+TYNT+IDGLS GK +A
Sbjct: 524 GVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEA 583
Query: 451 MKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLG 510
LL E+ KGLKPD TY+SL+ G G V I L+ +++R G++P + TY+ +++
Sbjct: 584 EDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH-LLIS 642
Query: 511 LCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
LC + +M S KP Y ++ A G ++A +L Q+ + +
Sbjct: 643 LCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSI 696
Score = 192 bits (487), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 219/468 (46%), Gaps = 34/468 (7%)
Query: 97 NGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVIT 156
N + E E+ V G + C+ L+ CK GK KA ++ G VP+ +
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391
Query: 157 YNVLISGYCRLGEIDNA---LQVLERMSVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQL 213
YN +I GYCR G++ A ++ +E+ + PD + YN ++R C+ G++ A + ++K
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 214 EKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLD 273
K P V TY ILI ++ + +L EM + G +P+VV+Y L+N +CK +L
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511
Query: 274 EAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILI 333
EA DM G P V +N+++ CS G+ DA R EM+ KG ++VT+N LI
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 334 NFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRG-- 391
+ L G L A D+L ++ + G P+ +YN ++ G+ + R I E M G
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK 631
Query: 392 -----------------------------CYPDIVTYNTLLTALCKDGKVDVAVEILNQL 422
PD++ YN +L G ++ A + Q+
Sbjct: 632 PTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQM 691
Query: 423 SNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKV 482
K TYN++I G KVGK + L++EM + ++P+ TY+ +V G
Sbjct: 692 IEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDY 751
Query: 483 DEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTR 530
A + +++ G +V N ++ GL + ++ A ++++M R
Sbjct: 752 MSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGR 799
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 200/407 (49%), Gaps = 38/407 (9%)
Query: 196 LCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPD 255
L D GK +E+ ++ YP V Y +LI+ CK + A +L DEM + +P
Sbjct: 192 LSDVGK---GLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPS 248
Query: 256 VVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLA 315
++TYN L++G CK G +++ K M + +P++IT N +L+ + G DAE +L
Sbjct: 249 LITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLK 308
Query: 316 EMVLKGCSPSVVTF-----------------------------------NILINFLCRKG 340
EM G P TF +IL+N LC++G
Sbjct: 309 EMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEG 368
Query: 341 LLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYN 400
+ +A +IL + G PN + YN ++ G+C++ + A +E M +G PD + YN
Sbjct: 369 KIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYN 428
Query: 401 TLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTK 460
L+ C+ G+++ A + +N++ K SP + TYN +I G + + ++ +L+EM
Sbjct: 429 CLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDN 488
Query: 461 GLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRA 520
G P+ ++Y +L+ L + K+ EA + D+E GV P V YN ++ G C + A
Sbjct: 489 GTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDA 548
Query: 521 IDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
+M+ + + TY LI+G++ G EA DLL ++ +G+
Sbjct: 549 FRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 210/429 (48%), Gaps = 34/429 (7%)
Query: 91 LRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGA 150
L L + G++E+ + L + G +P+ + ++I G+C+ G A +E +E G
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM 420
Query: 151 VPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAME 207
PD + YN LI +C LGE++NA + + +M V+P V TYN ++ + + +
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480
Query: 208 VLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGIC 267
+L + + P+V++Y LI CK S + +A + +M ++G P V YN+L++G C
Sbjct: 481 ILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540
Query: 268 KEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVV 327
+G++++A +F +M G + N++T+N ++ + TG+ +AE LL E+ KG P V
Sbjct: 541 SKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVF 600
Query: 328 TFNILINFLCRKGLLGRAIDILEKMPKHG--------------CT--------------- 358
T+N LI+ G + R I + E+M + G CT
Sbjct: 601 TYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMS 660
Query: 359 --PNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 416
P+ L YN VLH + M++A + M+ + D TYN+L+ K GK+
Sbjct: 661 LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVR 720
Query: 417 EILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGL 476
++++++ + P TYN ++ G +V A EM+ KG D + LV GL
Sbjct: 721 SLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780
Query: 477 SREGKVDEA 485
E + EA
Sbjct: 781 KEEWRSKEA 789
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 212/445 (47%), Gaps = 35/445 (7%)
Query: 158 NVLISGYCRLGEIDNALQVLERMSVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKEC 217
+VL++ + E + L + P + +L L + + + + V LE +
Sbjct: 116 SVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDF 175
Query: 218 YPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIK 277
P Y I+A K S VG+ ++L + M++ P V YNVL++G+CK R+++A +
Sbjct: 176 RPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQ 235
Query: 278 FLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLC 337
++M + P++IT+N ++ C G + ++ M PS++TFN L+ L
Sbjct: 236 LFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLF 295
Query: 338 RKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIV 397
+ G++ A ++L++M G P++ +++ + G+ +K + A+ E V G +
Sbjct: 296 KAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAY 355
Query: 398 TYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDG----------------- 440
T + LL ALCK+GK++ A EIL + K P + YNT+IDG
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 441 ------------------LSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKV 482
++G+ E A K + +M+ KG+ P TY+ L+GG R+ +
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475
Query: 483 DEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTIL 542
D+ + ++E G PNV++Y +++ LCK + A + DM R P Y +L
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNML 535
Query: 543 IEGIAYEGLAKEALDLLNQLCSRGV 567
I+G +G ++A ++ +G+
Sbjct: 536 IDGCCSKGKIEDAFRFSKEMLKKGI 560
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 166/340 (48%), Gaps = 7/340 (2%)
Query: 96 RNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVI 155
R E ++ F L+ M +G +P+++ +LI CK K +A V +ED G P V
Sbjct: 471 RKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVR 530
Query: 156 TYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQ 212
YN+LI G C G+I++A + + M + ++VTYNT++ L +GKL+ A ++L +
Sbjct: 531 IYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEI 590
Query: 213 LEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRL 272
K PDV TY LI V + + L +EM+ G P + TY++L++ KEG +
Sbjct: 591 SRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-I 649
Query: 273 DEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNIL 332
+ + +M +P+++ +N +L G A L +M+ K T+N L
Sbjct: 650 ELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSL 706
Query: 333 INFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGC 392
I + G L ++++M P + +YN ++ G C+ K A + M +G
Sbjct: 707 ILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGF 766
Query: 393 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLI 432
D+ N L++ L ++ + A ++++++ + V +
Sbjct: 767 LLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRMLGDVTV 806
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 24/276 (8%)
Query: 323 SPSV---VTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDR 379
SPS+ ++ +L L ++ A D+ + G P+S S +L K K+
Sbjct: 103 SPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRV 162
Query: 380 AIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVID 439
I ++ P Y + A K V +E+ N++ + P + YN +ID
Sbjct: 163 TINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLID 222
Query: 440 GLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRP 499
GL K + A +L +EM + L P ITY++L+ G + G +++ K+ ++ + P
Sbjct: 223 GLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEP 282
Query: 500 NVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALD-- 557
++IT+N+++ GL KA A ++L +M P T++IL +G + A+ AL
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVY 342
Query: 558 -----------------LLNQLCSRGVVKKSSAEQV 576
LLN LC G ++K AE++
Sbjct: 343 ETAVDSGVKMNAYTCSILLNALCKEGKIEK--AEEI 376
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 246 bits (628), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 150/544 (27%), Positives = 258/544 (47%), Gaps = 50/544 (9%)
Query: 52 NVKMKHGEAF---VQGHLNNGHISSGMENSSLNFEDFES-------NNHLRRLVRNGELE 101
NVK+ H EA + + +G +S +E E ++S N+ L LV++ L
Sbjct: 129 NVKLTH-EALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLG 187
Query: 102 EGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLI 161
+ K + M GD D L++G C GK +++E G +P+++ YN +I
Sbjct: 188 DARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTII 247
Query: 162 SGYCRLGEIDNALQVLERMSVA---PDVVTYNTILRTLCDSGKLNLAMEVLHKQLEK--- 215
GYC+LG+I+NA V + + + P + T+ T++ C G + +L + E+
Sbjct: 248 GGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLR 307
Query: 216 --------------------------------ECYPDVITYTILIEATCKESGVGQAMKL 243
+C PDV TY ILI CKE A+
Sbjct: 308 VSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGF 367
Query: 244 LDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCS 303
LDE KG IP+ ++Y L+ CK D A K L M GC+P+++T+ I++ +
Sbjct: 368 LDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVV 427
Query: 304 TGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLS 363
+G DA + +++ +G SP +N+L++ LC+ G A + +M P++
Sbjct: 428 SGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYV 487
Query: 364 YNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS 423
Y ++ GF + D A + + V +G D+V +N ++ C+ G +D A+ +N+++
Sbjct: 488 YATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMN 547
Query: 424 NKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVD 483
+H P TY+T+IDG K A+K+ M KP+ +TY+SL+ G +G
Sbjct: 548 EEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFK 607
Query: 484 EAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTY-RAIDILADMVTRSCKPTEATYTIL 542
A + F +++ + PNV+TY +++ L K T +A+ M+T C P E T+ L
Sbjct: 608 MAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCL 667
Query: 543 IEGI 546
++G
Sbjct: 668 LQGF 671
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 142/564 (25%), Positives = 251/564 (44%), Gaps = 90/564 (15%)
Query: 91 LRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGA 150
++ + G++E G K +E G IP+I+ ++I G+CK+G A V + ++ G
Sbjct: 212 VKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGF 271
Query: 151 VPDVITYNVLISGYCRLGEIDNALQVLE-------RMSVA-------------------- 183
+P + T+ +I+G+C+ G+ + ++L R+SV
Sbjct: 272 MPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAE 331
Query: 184 -----------PDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATC 232
PDV TYN ++ LC GK +A+ L + +K P+ ++Y LI+A C
Sbjct: 332 SIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYC 391
Query: 233 KESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVI 292
K A KLL +M +GC PD+VTY +L++G+ G +D+A+ + G P+
Sbjct: 392 KSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAA 451
Query: 293 THNIILRSMCSTGRWMDAERLLAEM----------------------------------- 317
+N+++ +C TGR++ A+ L +EM
Sbjct: 452 IYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLS 511
Query: 318 VLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKM 377
V KG VV N +I CR G+L A+ + +M + P+ +Y+ ++ G+ K++ M
Sbjct: 512 VEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDM 571
Query: 378 DRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTV 437
AI+ M C P++VTY +L+ C G +A E ++ + P ++TY T+
Sbjct: 572 ATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTL 631
Query: 438 IDGLSKVGKT-EQAMKLLEEMRTKGLKPDTITYSSLVGGL--------------SREGKV 482
I L+K T E+A+ E M T P+ +T++ L+ G S G+
Sbjct: 632 IRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQS 691
Query: 483 DEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTIL 542
+ FH ++ G + YNS ++ LC A MV + P ++ +
Sbjct: 692 SLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAI 751
Query: 543 IEGIAYEGLAKEALDLLNQLCSRG 566
+ G G +K+ ++ C+ G
Sbjct: 752 LHGFCVVGNSKQWRNM--DFCNLG 773
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 207/457 (45%), Gaps = 71/457 (15%)
Query: 160 LISGYCRLGEIDNALQVLERMSVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLE-KECY 218
L++ Y EI++ L L +V + +L +SG L+ A+E+ +E +
Sbjct: 108 LLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSV 167
Query: 219 PDVITYTILIEATCKESGVGQAMKLLDEM------------------------------- 247
PDVI L+ K +G A K+ DEM
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 248 ----RNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCS 303
KGCIP++V YN ++ G CK G ++ A ++ G P + T ++ C
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 304 TGRWMDAERLLAEMVLKG-----------------------------------CSPSVVT 328
G ++ ++RLL+E+ +G C P V T
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 329 FNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMV 388
+NILIN LC++G A+ L++ K G PN+LSY P++ +CK K+ D A + L M
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 389 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTE 448
RGC PDIVTY L+ L G +D AV + +L ++ SP YN ++ GL K G+
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFL 467
Query: 449 QAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIM 508
A L EM + + PD Y++L+ G R G DEA K+F GV+ +V+ +N+++
Sbjct: 468 PAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMI 527
Query: 509 LGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEG 545
G C++ A+ + M P + TY+ +I+G
Sbjct: 528 KGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDG 564
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 163/358 (45%), Gaps = 34/358 (9%)
Query: 94 LVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPD 153
L + G M+ +PD +LI GF + G +A +V + + G D
Sbjct: 460 LCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519
Query: 154 VITYNVLISGYCRLGEIDNALQVLERMS---VAPDVVTYNTILRTLCDSGKLNLAMEVLH 210
V+ +N +I G+CR G +D AL + RM+ + PD TY+TI+ + A+++
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Query: 211 KQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEG 270
+ +C P+V+TYT LI C + A + EM+ + +P+VVTY L+ + KE
Sbjct: 580 YMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKES 639
Query: 271 R-LDEAIKFLNDMPSYGCQPNVITHNIILRSMC--STGRWM--------DAERLLAE--- 316
L++A+ + M + C PN +T N +L+ ++G+ + L +E
Sbjct: 640 STLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFH 699
Query: 317 -MVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFC--- 372
M G S +N + LC G++ A +KM K G +P+ +S+ +LHGFC
Sbjct: 700 RMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVG 759
Query: 373 -------------KEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 417
EK ++ A+ Y +++ P I +T+L A+ + VE
Sbjct: 760 NSKQWRNMDFCNLGEKGLEVAVRYSQVLEQHLPQPVICEASTILHAMVEKADTKEPVE 817
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 121/275 (44%), Gaps = 40/275 (14%)
Query: 332 LINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVS-R 390
+ L R + D+L + + + VLH + + + +A+E + +V
Sbjct: 105 FLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELY 164
Query: 391 GCYPDIVTYNTLLTAL-----------------------------------CKDGKVDVA 415
PD++ N+LL+ L C +GKV+V
Sbjct: 165 DSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVG 224
Query: 416 VEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGG 475
+++ K C P ++ YNT+I G K+G E A + +E++ KG P T+ +++ G
Sbjct: 225 RKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMING 284
Query: 476 LSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRA--IDILADMVTRSCK 533
+EG + +L +++ G+R +V N+I+ K R Y+ + + ++ CK
Sbjct: 285 FCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDA--KYRHGYKVDPAESIGWIIANDCK 342
Query: 534 PTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVV 568
P ATY ILI + EG + A+ L++ +G++
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLI 377
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 243 bits (621), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 142/490 (28%), Positives = 252/490 (51%), Gaps = 30/490 (6%)
Query: 108 ESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRL 167
+ MV G P LIR C A + + + + G P+ T+ +L+ GYC+
Sbjct: 136 KDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKA 195
Query: 168 GEIDNALQVL---ERMSVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITY 224
G D L++L E V P+ V YNTI+ + C G+ + + +++ K E+ PD++T+
Sbjct: 196 GLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTF 255
Query: 225 TILIEATCKESGVGQAMKLLDEMRNKGCI----PDVVTYNVLVNGICKEGRLDEAIKFLN 280
I A CKE V A ++ +M + P+ +TYN+++ G CK G L++A
Sbjct: 256 NSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFE 315
Query: 281 DMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKG 340
+ ++ ++NI L+ + G++++AE +L +M KG PS+ ++NIL++ LC+ G
Sbjct: 316 SIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLG 375
Query: 341 LLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYN 400
+L A I+ M ++G P++++Y +LHG+C K+D A L+ M+ C P+ T N
Sbjct: 376 MLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCN 435
Query: 401 TLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTK 460
LL +L K G++ A E+L +++ K +T N ++DGL G+ ++A+++++ MR
Sbjct: 436 ILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVH 495
Query: 461 GLK-----------------------PDTITYSSLVGGLSREGKVDEAIKLFHDLERLGV 497
G PD ITYS+L+ GL + G+ EA LF ++ +
Sbjct: 496 GSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKL 555
Query: 498 RPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALD 557
+P+ + YN + CK + A +L DM + C + TY LI G+ + E
Sbjct: 556 QPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHG 615
Query: 558 LLNQLCSRGV 567
L++++ +G+
Sbjct: 616 LMDEMKEKGI 625
Score = 242 bits (617), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 140/509 (27%), Positives = 258/509 (50%), Gaps = 32/509 (6%)
Query: 91 LRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGA 150
+R L + ++ + + M G P+ L+RG+CK G T K ++ +E G
Sbjct: 154 IRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGV 213
Query: 151 VPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAME 207
+P+ + YN ++S +CR G D++ +++E+M + PD+VT+N+ + LC GK+ L
Sbjct: 214 LPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKV-LDAS 272
Query: 208 VLHKQLEKECY-----PDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVL 262
+ +E + Y P+ ITY ++++ CK + A L + +R + + +YN+
Sbjct: 273 RIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIW 332
Query: 263 VNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGC 322
+ G+ + G+ EA L M G P++ ++NI++ +C G DA+ ++ M G
Sbjct: 333 LQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392
Query: 323 SPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIE 382
P VT+ L++ C G + A +L++M ++ C PN+ + N +LH K ++ A E
Sbjct: 393 CPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEE 452
Query: 383 YLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI-----------LNQLSNKH----- 426
L M +G D VT N ++ LC G++D A+EI L L N +
Sbjct: 453 LLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVD 512
Query: 427 -------CSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSRE 479
C P LITY+T+++GL K G+ +A L EM + L+PD++ Y+ + ++
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572
Query: 480 GKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATY 539
GK+ A ++ D+E+ G ++ TYNS++LGL Q + ++ +M + P TY
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTY 632
Query: 540 TILIEGIAYEGLAKEALDLLNQLCSRGVV 568
I+ + ++A +LL+++ + +
Sbjct: 633 NTAIQYLCEGEKVEDATNLLDEMMQKNIA 661
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/494 (27%), Positives = 245/494 (49%), Gaps = 27/494 (5%)
Query: 88 NNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
N L+ + G LE+ ES+ + D+ + ++G + GK +A V++ + D
Sbjct: 295 NLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD 354
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNA---LQVLERMSVAPDVVTYNTILRTLCDSGKLNL 204
G P + +YN+L+ G C+LG + +A + +++R V PD VTY +L C GK++
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDA 414
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
A +L + + C P+ T IL+ + K + +A +LL +M KG D VT N++V+
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVD 474
Query: 265 GICKEGRLDEAIKFLNDMPSYG-----------------------CQPNVITHNIILRSM 301
G+C G LD+AI+ + M +G C P++IT++ +L +
Sbjct: 475 GLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGL 534
Query: 302 CSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNS 361
C GR+ +A+ L AEM+ + P V +NI I+ C++G + A +L+ M K GC +
Sbjct: 535 CKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSL 594
Query: 362 LSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 421
+YN ++ G + ++ ++ M +G P+I TYNT + LC+ KV+ A +L++
Sbjct: 595 ETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDE 654
Query: 422 LSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGK 481
+ K+ +P + ++ +I+ KV + A ++ E + + + + YS + L G+
Sbjct: 655 MMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL-YSLMFNELLAAGQ 713
Query: 482 VDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTI 541
+ +A +L + G Y ++ LCK + A IL M+ R A
Sbjct: 714 LLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMP 773
Query: 542 LIEGIAYEGLAKEA 555
+I+G+ G KEA
Sbjct: 774 VIDGLGKMGNKKEA 787
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 220/457 (48%), Gaps = 30/457 (6%)
Query: 152 PDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEV 208
P V YN+L+ + ++ + + M +AP T+N ++R LCDS ++ A E+
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 209 LHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICK 268
+ EK C P+ T+ IL+ CK + ++LL+ M + G +P+ V YN +V+ C+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 269 EGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGC----SP 324
EGR D++ K + M G P+++T N + ++C G+ +DA R+ ++M L P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 325 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYL 384
+ +T+N+++ C+ GLL A + E + ++ + SYN L G + K A L
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 385 EIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKV 444
+ M +G P I +YN L+ LCK G + A I+ + P +TY ++ G V
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 445 GKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITY 504
GK + A LL+EM P+ T + L+ L + G++ EA +L + G + +T
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC 469
Query: 505 NSIMLGLCKARQTYRAIDILADM-----------------------VTRSCKPTEATYTI 541
N I+ GLC + + +AI+I+ M + +C P TY+
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529
Query: 542 LIEGIAYEGLAKEALDLLNQLCSRGVVKKSSAEQVAV 578
L+ G+ G EA +L ++ + S A + +
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI 566
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 152/284 (53%), Gaps = 4/284 (1%)
Query: 288 QPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAID 347
+P+V +N++L S R L +MVL G +P TFN+LI LC + A +
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 348 ILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALC 407
+ ++MP+ GC PN ++ ++ G+CK D+ +E L M S G P+ V YNT++++ C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 408 KDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTK---GL-K 463
++G+ D + +++ ++ + P ++T+N+ I L K GK A ++ +M GL +
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 464 PDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDI 523
P++ITY+ ++ G + G +++A LF + ++ +YN + GL + + A +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 524 LADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
L M + P+ +Y IL++G+ G+ +A ++ + GV
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 147/358 (41%), Gaps = 60/358 (16%)
Query: 91 LRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVME------- 143
L L + G + E + L M G D + C ++ G C G+ KA +++
Sbjct: 438 LHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGS 497
Query: 144 ------------IVEDS----GAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAP 184
+V+DS +PD+ITY+ L++G C+ G A + M + P
Sbjct: 498 AALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP 557
Query: 185 DVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLL 244
D V YN + C GK++ A VL +K C+ + TY LI ++ + + L+
Sbjct: 558 DSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLM 617
Query: 245 DEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMC-- 302
DEM+ KG P++ TYN + +C+ ++++A L++M PNV + ++ + C
Sbjct: 618 DEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKV 677
Query: 303 --------------------------------STGRWMDAERLLAEMVLKGCSPSVVTFN 330
+ G+ + A LL ++ +G +
Sbjct: 678 PDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYK 737
Query: 331 ILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMV 388
L+ LC+K L A IL KM G + + PV+ G K A + + M+
Sbjct: 738 DLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMM 795
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 243 bits (620), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 143/483 (29%), Positives = 252/483 (52%), Gaps = 10/483 (2%)
Query: 91 LRRLVRNGELE---EGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
L LVR E + E F +V G PD+ T+ I FCK GK +A ++ +E+
Sbjct: 246 LTSLVRANEFQKCCEAF----DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 301
Query: 148 SGAVPDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNL 204
+G P+V+T+N +I G G D A E+M + P ++TY+ +++ L + ++
Sbjct: 302 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGD 361
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
A VL + +K P+VI Y LI++ + + +A+++ D M +KG TYN L+
Sbjct: 362 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 421
Query: 265 GICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSP 324
G CK G+ D A + L +M S G N + ++ +CS + A R + EM+L+ SP
Sbjct: 422 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP 481
Query: 325 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYL 384
LI+ LC+ G +A+++ + G ++ + N +LHG C+ K+D A
Sbjct: 482 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 541
Query: 385 EIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKV 444
+ ++ RGC D V+YNTL++ C K+D A L+++ + P TY+ +I GL +
Sbjct: 542 KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNM 601
Query: 445 GKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITY 504
K E+A++ ++ + G+ PD TYS ++ G + + +E + F ++ V+PN + Y
Sbjct: 602 NKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 661
Query: 505 NSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCS 564
N ++ C++ + A+++ DM + P ATYT LI+G++ +EA L ++
Sbjct: 662 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 721
Query: 565 RGV 567
G+
Sbjct: 722 EGL 724
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/469 (30%), Positives = 242/469 (51%), Gaps = 4/469 (0%)
Query: 114 GDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNA 173
G P C L+ + + +K ++V G PDV + I+ +C+ G+++ A
Sbjct: 234 GMFPSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAINAFCKGGKVEEA 292
Query: 174 LQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEA 230
+++ +M VAP+VVT+NT++ L G+ + A K +E+ P +ITY+IL++
Sbjct: 293 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 352
Query: 231 TCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPN 290
+ +G A +L EM KG P+V+ YN L++ + G L++AI+ + M S G
Sbjct: 353 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 412
Query: 291 VITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILE 350
T+N +++ C G+ +AERLL EM+ G + + +F +I LC + A+ +
Sbjct: 413 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 472
Query: 351 KMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDG 410
+M +P ++ G CK K +A+E +++G D T N LL LC+ G
Sbjct: 473 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 532
Query: 411 KVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYS 470
K+D A I ++ + C ++YNT+I G K ++A L+EM +GLKPD TYS
Sbjct: 533 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 592
Query: 471 SLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTR 530
L+ GL KV+EAI+ + D +R G+ P+V TY+ ++ G CKA +T + +M+++
Sbjct: 593 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 652
Query: 531 SCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSSAEQVAVK 579
+ +P Y LI G AL+L + +G+ S+ +K
Sbjct: 653 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 701
Score = 232 bits (592), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 142/514 (27%), Positives = 255/514 (49%), Gaps = 38/514 (7%)
Query: 96 RNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVI 155
+ G++EE K M G P+++ ++I G G+ +A E + + G P +I
Sbjct: 285 KGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLI 344
Query: 156 TYNVLISGYCRLGEIDNALQVLERMS---VAPDVVTYNTILRTLCDSGKLNLAMEVLHKQ 212
TY++L+ G R I +A VL+ M+ P+V+ YN ++ + ++G LN A+E+
Sbjct: 345 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 404
Query: 213 LEKECYPDVITYTILIEATCKESGVGQAMKLLDEMR------NKGCIPDVV--------- 257
+ K TY LI+ CK A +LL EM N+G V+
Sbjct: 405 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 464
Query: 258 --------------------TYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNII 297
L++G+CK G+ +A++ + G + T N +
Sbjct: 465 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 524
Query: 298 LRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGC 357
L +C G+ +A R+ E++ +GC V++N LI+ C K L A L++M K G
Sbjct: 525 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 584
Query: 358 TPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 417
P++ +Y+ ++ G K++ AI++ + G PD+ TY+ ++ CK + + E
Sbjct: 585 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 644
Query: 418 ILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLS 477
+++ +K+ P + YN +I + G+ A++L E+M+ KG+ P++ TY+SL+ G+S
Sbjct: 645 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 704
Query: 478 REGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEA 537
+V+EA LF ++ G+ PNV Y +++ G K Q + +L +M +++ P +
Sbjct: 705 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 764
Query: 538 TYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKS 571
TYT++I G A +G EA LLN++ +G+V S
Sbjct: 765 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 798
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 140/504 (27%), Positives = 253/504 (50%), Gaps = 11/504 (2%)
Query: 56 KHGEAFVQGHLNNGHISSGMENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYHGD 115
++ EAF+ + GME + + + ++ L R + + + L+ M G
Sbjct: 323 RYDEAFM---FKEKMVERGMEPTLITYSIL-----VKGLTRAKRIGDAYFVLKEMTKKGF 374
Query: 116 IPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQ 175
P++I +LI F + G KA + +++ G TYN LI GYC+ G+ DNA +
Sbjct: 375 PPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAER 434
Query: 176 VLERM-SVAPDVV--TYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATC 232
+L+ M S+ +V ++ +++ LC + A+ + + L + P T LI C
Sbjct: 435 LLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 494
Query: 233 KESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVI 292
K +A++L + NKG + D T N L++G+C+ G+LDEA + ++ GC + +
Sbjct: 495 KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV 554
Query: 293 THNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKM 352
++N ++ C + +A L EMV +G P T++ILI L + AI +
Sbjct: 555 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 614
Query: 353 PKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKV 412
++G P+ +Y+ ++ G CK ++ + E+ + M+S+ P+ V YN L+ A C+ G++
Sbjct: 615 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 674
Query: 413 DVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSL 472
+A+E+ + +K SP TY ++I G+S + + E+A L EEMR +GL+P+ Y++L
Sbjct: 675 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 734
Query: 473 VGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSC 532
+ G + G++ + L ++ V PN ITY ++ G + A +L +M +
Sbjct: 735 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 794
Query: 533 KPTEATYTILIEGIAYEGLAKEAL 556
P TY I G +G EA
Sbjct: 795 VPDSITYKEFIYGYLKQGGVLEAF 818
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 211/439 (48%), Gaps = 40/439 (9%)
Query: 88 NNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVM-EIVE 146
NN + + G L + + + MV G +LI+G+CK G+ A R++ E++
Sbjct: 382 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 441
Query: 147 -----DSGAVPDVI-----------------------------TYNVLISGYCRLGEIDN 172
+ G+ VI LISG C+ G+
Sbjct: 442 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 501
Query: 173 ALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIE 229
AL++ + D T N +L LC++GKL+ A + + L + C D ++Y LI
Sbjct: 502 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 561
Query: 230 ATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQP 289
C + + +A LDEM +G PD TY++L+ G+ +++EAI+F +D G P
Sbjct: 562 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 621
Query: 290 NVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDIL 349
+V T+++++ C R + + EM+ K P+ V +N LI CR G L A+++
Sbjct: 622 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 681
Query: 350 EKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKD 409
E M G +PNS +Y ++ G +++ A E M G P++ Y L+ K
Sbjct: 682 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 741
Query: 410 GKVDVAVE-ILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTIT 468
G++ V VE +L ++ +K+ P ITY +I G ++ G +A +LL EMR KG+ PD+IT
Sbjct: 742 GQM-VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 800
Query: 469 YSSLVGGLSREGKVDEAIK 487
Y + G ++G V EA K
Sbjct: 801 YKEFIYGYLKQGGVLEAFK 819
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 190/412 (46%), Gaps = 73/412 (17%)
Query: 226 ILIEATC---KESGVGQAMKLLDEMRNKGCIPDVVTYNVL-------------------- 262
+LIE C K G A+ + + NKG P T N+L
Sbjct: 206 LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV 265
Query: 263 --------------VNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWM 308
+N CK G+++EA+K + M G PNV+T N ++ + GR+
Sbjct: 266 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 325
Query: 309 DAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVL 368
+A +MV +G P+++T++IL+ L R +G A +L++M K G PN + YN ++
Sbjct: 326 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 385
Query: 369 HGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSN---- 424
F + +++AIE ++MVS+G TYNTL+ CK+G+ D A +L ++ +
Sbjct: 386 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 445
Query: 425 -------------------------------KHCSPVLITYNTVIDGLSKVGKTEQAMKL 453
++ SP T+I GL K GK +A++L
Sbjct: 446 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 505
Query: 454 LEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCK 513
+ KG DT T ++L+ GL GK+DEA ++ ++ G + ++YN+++ G C
Sbjct: 506 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 565
Query: 514 ARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSR 565
++ A L +MV R KP TY+ILI G+ +EA+ + C R
Sbjct: 566 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD-CKR 616
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 117 PDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDNALQV 176
P+ I T +I G+ + G +A+R++ + + G VPD ITY I GY + G + A +
Sbjct: 761 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKG 820
Query: 177 LERMSVAPDVVTYNTILR 194
+ + A + +N +++
Sbjct: 821 SDEENYAAIIEGWNKLIQ 838
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 243 bits (619), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 140/475 (29%), Positives = 242/475 (50%), Gaps = 3/475 (0%)
Query: 91 LRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGA 150
+R +R G +++ + M +G P + C +++ K G+ ++ +
Sbjct: 130 IRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKI 189
Query: 151 VPDVITYNVLISGYCRLGEIDNA---LQVLERMSVAPDVVTYNTILRTLCDSGKLNLAME 207
PDV T+N+LI+ C G + + +Q +E+ AP +VTYNT+L C G+ A+E
Sbjct: 190 CPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIE 249
Query: 208 VLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGIC 267
+L K DV TY +LI C+ + + + LL +MR + P+ VTYN L+NG
Sbjct: 250 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 309
Query: 268 KEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVV 327
EG++ A + LN+M S+G PN +T N ++ S G + +A ++ M KG +PS V
Sbjct: 310 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 369
Query: 328 TFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIM 387
++ +L++ LC+ A +M ++G ++Y ++ G CK +D A+ L M
Sbjct: 370 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429
Query: 388 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKT 447
G PDIVTY+ L+ CK G+ A EI+ ++ SP I Y+T+I ++G
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 489
Query: 448 EQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSI 507
++A+++ E M +G D T++ LV L + GKV EA + + G+ PN ++++ +
Sbjct: 490 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 549
Query: 508 MLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQL 562
+ G + + +A + +M PT TY L++G+ G +EA L L
Sbjct: 550 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 604
Score = 243 bits (619), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 156/554 (28%), Positives = 267/554 (48%), Gaps = 44/554 (7%)
Query: 59 EAFVQGHLNNGHISSGMENSSL------NFEDFESNNHLRRLVRNGELEEGFKFLESMVY 112
+ ++ +L G I +E L N + N L +V++GE + FL+ M+
Sbjct: 127 DILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLK 186
Query: 113 HGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVITYNVLISGYCRLGEIDN 172
PD+ LI C G K++ +M+ +E SG P ++TYN ++ YC+ G
Sbjct: 187 RKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKA 246
Query: 173 ALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIE 229
A+++L+ M V DV TYN ++ LC S ++ +L ++ +P+ +TY LI
Sbjct: 247 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 306
Query: 230 ATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQP 289
E V A +LL+EM + G P+ VT+N L++G EG EA+K M + G P
Sbjct: 307 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 366
Query: 290 NVITHNIILRSMC-------STGRWMDAER----------------------------LL 314
+ +++ ++L +C + G +M +R LL
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 426
Query: 315 AEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKE 374
EM G P +VT++ LIN C+ G A +I+ ++ + G +PN + Y+ +++ C+
Sbjct: 427 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM 486
Query: 375 KKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITY 434
+ AI E M+ G D T+N L+T+LCK GKV A E + +++ P +++
Sbjct: 487 GCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF 546
Query: 435 NTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLER 494
+ +I+G G+ +A + +EM G P TY SL+ GL + G + EA K L
Sbjct: 547 DCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA 606
Query: 495 LGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKE 554
+ + + YN+++ +CK+ +A+ + +MV RS P TYT LI G+ +G
Sbjct: 607 VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVI 666
Query: 555 ALDLLNQLCSRGVV 568
A+ + +RG V
Sbjct: 667 AILFAKEAEARGNV 680
Score = 219 bits (557), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 215/418 (51%), Gaps = 3/418 (0%)
Query: 157 YNVLISGYCRLGEIDNALQVLERMSVA---PDVVTYNTILRTLCDSGKLNLAMEVLHKQL 213
Y++LI Y R G I ++L++ M + P V T N IL ++ SG+ L + L
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 214 EKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLD 273
+++ PDV T+ ILI C E ++ L+ +M G P +VTYN +++ CK+GR
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245
Query: 274 EAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILI 333
AI+ L+ M S G +V T+N+++ +C + R LL +M + P+ VT+N LI
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305
Query: 334 NFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCY 393
N +G + A +L +M G +PN +++N ++ G E A++ +M ++G
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365
Query: 394 PDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKL 453
P V+Y LL LCK+ + D+A ++ ITY +IDGL K G ++A+ L
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425
Query: 454 LEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCK 513
L EM G+ PD +TYS+L+ G + G+ A ++ + R+G+ PN I Y++++ C+
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485
Query: 514 ARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKS 571
AI I M+ T+ +L+ + G EA + + + S G++ +
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543
Score = 195 bits (496), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 173/316 (54%)
Query: 252 CIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAE 311
C + Y++L+ +EG + ++++ M YG P+V T N IL S+ +G +
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 312 RLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGF 371
L EM+ + P V TFNILIN LC +G ++ +++KM K G P ++YN VLH +
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 372 CKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVL 431
CK+ + AIE L+ M S+G D+ TYN L+ LC+ ++ +L + + P
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 432 ITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHD 491
+TYNT+I+G S GK A +LL EM + GL P+ +T+++L+ G EG EA+K+F+
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 492 LERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGL 551
+E G+ P+ ++Y ++ GLCK + A M TYT +I+G+ G
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418
Query: 552 AKEALDLLNQLCSRGV 567
EA+ LLN++ G+
Sbjct: 419 LDEAVVLLNEMSKDGI 434
Score = 192 bits (487), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 132/558 (23%), Positives = 239/558 (42%), Gaps = 74/558 (13%)
Query: 96 RNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVI 155
R G L+E + E+M+ G D L+ CK GK +A M + G +P+ +
Sbjct: 485 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 544
Query: 156 TYNVLISGYCRLGEIDNALQVLERMSVA---PDVVTYNTILRTLCDSGKLNLAMEVLHKQ 212
+++ LI+GY GE A V + M+ P TY ++L+ LC G L A + L
Sbjct: 545 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 604
Query: 213 LEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRL 272
D + Y L+ A CK + +A+ L EM + +PD TY L++G+C++G+
Sbjct: 605 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKT 664
Query: 273 DEAIKFLNDMPSYG-CQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNI 331
AI F + + G PN + + + M G+W +M G +P +VT N
Sbjct: 665 VIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNA 724
Query: 332 LINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGF-------------------- 371
+I+ R G + + D+L +M PN +YN +LHG+
Sbjct: 725 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG 784
Query: 372 ---------------CKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 416
C+ ++ ++ L+ + RG D T+N L++ C +G+++ A
Sbjct: 785 ILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAF 844
Query: 417 E-----------------------------------ILNQLSNKHCSPVLITYNTVIDGL 441
+ +L+++S + SP Y +I+GL
Sbjct: 845 DLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGL 904
Query: 442 SKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNV 501
+VG + A + EEM + P + S++V L++ GK DEA L + ++ + P +
Sbjct: 905 CRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTI 964
Query: 502 ITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQ 561
++ ++M CK A+++ M K +Y +LI G+ +G A +L +
Sbjct: 965 ASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEE 1024
Query: 562 LCSRGVVKKSSAEQVAVK 579
+ G + ++ + ++
Sbjct: 1025 MKGDGFLANATTYKALIR 1042
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 180/351 (51%)
Query: 217 CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAI 276
C + Y ILI +E + ++++ M G P V T N ++ + K G
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 277 KFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFL 336
FL +M P+V T NI++ +C+ G + + L+ +M G +P++VT+N ++++
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 337 CRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDI 396
C+KG AI++L+ M G + +YN ++H C+ ++ + L M R +P+
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 397 VTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEE 456
VTYNTL+ +GKV +A ++LN++ + SP +T+N +IDG G ++A+K+
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 457 MRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQ 516
M KGL P ++Y L+ GL + + D A + ++R GV ITY ++ GLCK
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418
Query: 517 TYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
A+ +L +M P TY+ LI G G K A +++ ++ G+
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 204/448 (45%), Gaps = 5/448 (1%)
Query: 88 NNHLRRLVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVED 147
N L + ++G L + MV +PD TSLI G C+ GKT A + E
Sbjct: 617 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 676
Query: 148 SGAV-PDVITYNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLN 203
G V P+ + Y + G + G+ + E+M PD+VT N ++ GK+
Sbjct: 677 RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 736
Query: 204 LAMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLV 263
++L + + P++ TY IL+ K V + L + G +PD +T + LV
Sbjct: 737 KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 796
Query: 264 NGICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCS 323
GIC+ L+ +K L G + + T N+++ C+ G A L+ M G S
Sbjct: 797 LGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGIS 856
Query: 324 PSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEY 383
T + +++ L R + +L +M K G +P S Y +++G C+ + A
Sbjct: 857 LDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVV 916
Query: 384 LEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSK 443
E M++ P V + ++ AL K GK D A +L + P + ++ T++ K
Sbjct: 917 KEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCK 976
Query: 444 VGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVIT 503
G +A++L M GLK D ++Y+ L+ GL +G + A +L+ +++ G N T
Sbjct: 977 NGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATT 1036
Query: 504 YNSIMLGLCKARQTYRAID-ILADMVTR 530
Y +++ GL + D IL D++ R
Sbjct: 1037 YKALIRGLLARETAFSGADIILKDLLAR 1064
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/519 (22%), Positives = 224/519 (43%), Gaps = 40/519 (7%)
Query: 97 NGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPDVIT 156
+GE + F + M G P SL++G CK G R+A + ++ + A D +
Sbjct: 556 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 615
Query: 157 YNVLISGYCRLGEIDNALQVLERM---SVAPDVVTYNTILRTLCDSGKLNLAM------- 206
YN L++ C+ G + A+ + M S+ PD TY +++ LC GK +A+
Sbjct: 616 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 675
Query: 207 ---EVLHKQLEKECY--------------------------PDVITYTILIEATCKESGV 237
VL ++ C+ PD++T +I+ + +
Sbjct: 676 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735
Query: 238 GQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHNII 297
+ LL EM N+ P++ TYN+L++G K + + + G P+ +T + +
Sbjct: 736 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795
Query: 298 LRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGC 357
+ +C + ++L + +G TFN+LI+ C G + A D+++ M G
Sbjct: 796 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855
Query: 358 TPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 417
+ + + + ++ + + + L M +G P+ Y L+ LC+ G + A
Sbjct: 856 SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFV 915
Query: 418 ILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLS 477
+ ++ P + + ++ L+K GK ++A LL M L P ++++L+
Sbjct: 916 VKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCC 975
Query: 478 REGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEA 537
+ G V EA++L + G++ ++++YN ++ GLC A ++ +M
Sbjct: 976 KNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANAT 1035
Query: 538 TYTILIEGIAYEGLAKEALD-LLNQLCSRGVVKKSSAEQ 575
TY LI G+ A D +L L +RG + S Q
Sbjct: 1036 TYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQ 1074
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 35/213 (16%)
Query: 390 RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQ 449
R C + Y+ L+ ++G + ++EI + +P + T N ++ + K G+
Sbjct: 117 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 176
Query: 450 AMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIML 509
L+EM + + PD T++ L+ L EG +++ L +E+ G P ++TYN+++
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236
Query: 510 GLCKARQTYRAID-----------------------------------ILADMVTRSCKP 534
CK + AI+ +L DM R P
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 296
Query: 535 TEATYTILIEGIAYEGLAKEALDLLNQLCSRGV 567
E TY LI G + EG A LLN++ S G+
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL 329
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 16/104 (15%)
Query: 469 YSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMV 528
Y L+ REG + +++++F + G P+V T N+I+ + K+ + L +M+
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 529 TRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCSRGVVKKSS 572
R P AT+ ILI N LC+ G +KSS
Sbjct: 186 KRKICPDVATFNILI----------------NVLCAEGSFEKSS 213
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 242 bits (617), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 130/428 (30%), Positives = 227/428 (53%), Gaps = 2/428 (0%)
Query: 147 DSGAVPDVITYNVLISGYCRLGEIDNALQVLE--RMSVAPDVVTYNTILRTLCDSGKLNL 204
D+G VP +N L++ + + V DV ++ +++ C++G++
Sbjct: 122 DNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEK 181
Query: 205 AMEVLHKQLEKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGCIPDVVTYNVLVN 264
+ ++L + E P+V+ YT LI+ CK+ + +A L EM G + + TY VL+N
Sbjct: 182 SFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLIN 241
Query: 265 GICKEGRLDEAIKFLNDMPSYGCQPNVITHNIILRSMCSTGRWMDAERLLAEMVLKGCSP 324
G+ K G + + M G PN+ T+N ++ +C GR DA ++ EM +G S
Sbjct: 242 GLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSC 301
Query: 325 SVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYL 384
++VT+N LI LCR+ L A ++++M G PN ++YN ++ GFC K+ +A+
Sbjct: 302 NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC 361
Query: 385 EIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSNKHCSPVLITYNTVIDGLSKV 444
+ SRG P +VTYN L++ C+ G A +++ ++ + P +TY +ID ++
Sbjct: 362 RDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS 421
Query: 445 GKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLERLGVRPNVITY 504
E+A++L M GL PD TYS L+ G +G+++EA +LF + PN + Y
Sbjct: 422 DNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIY 481
Query: 505 NSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAKEALDLLNQLCS 564
N+++LG CK +YRA+ +L +M + P A+Y +IE + E +KEA L+ ++
Sbjct: 482 NTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMID 541
Query: 565 RGVVKKSS 572
G+ +S
Sbjct: 542 SGIDPSTS 549
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/490 (25%), Positives = 245/490 (50%), Gaps = 10/490 (2%)
Query: 57 HGEAFVQGHLNNGHISSGMENSSLNFEDFESNNHLRRLVRNGELEEGFKFLESMVYHGDI 116
H + F L H + E S F +E + V++ L + MV +G +
Sbjct: 71 HSQFFTSSSL--LHYLTESETSKTKFRLYEV--IINSYVQSQSLNLSISYFNEMVDNGFV 126
Query: 117 PDIIPCTSLIRGFCKVGKTRKATRVMEIVED-SGAVPDVITYNVLISGYCRLGEIDNALQ 175
P C + + F VG + E+ S V DV ++ +LI G C GEI+ +
Sbjct: 127 PGS-NCFNYLLTFV-VGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFD 184
Query: 176 VLERMS---VAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATC 232
+L ++ +P+VV Y T++ C G++ A ++ + + + TYT+LI
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLF 244
Query: 233 KESGVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVI 292
K Q ++ ++M+ G P++ TYN ++N +CK+GR +A + ++M G N++
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIV 304
Query: 293 THNIILRSMCSTGRWMDAERLLAEMVLKGCSPSVVTFNILINFLCRKGLLGRAIDILEKM 352
T+N ++ +C + +A +++ +M G +P+++T+N LI+ C G LG+A+ + +
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 353 PKHGCTPNSLSYNPVLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKV 412
G +P+ ++YN ++ GFC++ A + ++ M RG P VTY L+ + +
Sbjct: 365 KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNM 424
Query: 413 DVAVEILNQLSNKHCSPVLITYNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSL 472
+ A+++ + P + TY+ +I G G+ +A +L + M K +P+ + Y+++
Sbjct: 425 EKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 473 VGGLSREGKVDEAIKLFHDLERLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSC 532
+ G +EG A+KL ++E + PNV +Y ++ LCK R++ A ++ M+
Sbjct: 485 ILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Query: 533 KPTEATYTIL 542
P+ + +++
Sbjct: 545 DPSTSILSLI 554
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 117/245 (47%), Gaps = 38/245 (15%)
Query: 94 LVRNGELEEGFKFLESMVYHGDIPDIIPCTSLIRGFCKVGKTRKATRVMEIVEDSGAVPD 153
L R +L E K ++ M G P++I +LI GFC VGK KA + ++ G P
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 154 VITYNVLISGYCRLGE-----------------------------------IDNALQV-- 176
++TYN+L+SG+CR G+ ++ A+Q+
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432
Query: 177 -LERMSVAPDVVTYNTILRTLCDSGKLNLAMEVLHKQLEKECYPDVITYTILIEATCKES 235
+E + + PDV TY+ ++ C G++N A + +EK C P+ + Y +I CKE
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 236 GVGQAMKLLDEMRNKGCIPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSYGCQPNVITHN 295
+A+KLL EM K P+V +Y ++ +CKE + EA + + M G P+ +
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILS 552
Query: 296 IILRS 300
+I R+
Sbjct: 553 LISRA 557
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Query: 434 YNTVIDGLSKVGKTEQAMKLLEEMRTKGLKPDTITYSSLVGGLSREGKVDEAIKLFHDLE 493
Y +I+ + ++ EM G P + ++ L+ + ++ F++
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-N 155
Query: 494 RLGVRPNVITYNSIMLGLCKARQTYRAIDILADMVTRSCKPTEATYTILIEGIAYEGLAK 553
+ V +V ++ ++ G C+A + ++ D+L ++ P YT LI+G +G +
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 554 EALDLLNQLCSRGVV 568
+A DL ++ G+V
Sbjct: 216 KAKDLFFEMGKLGLV 230
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 208,147,154
Number of Sequences: 539616
Number of extensions: 8767148
Number of successful extensions: 39228
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 24807
Number of HSP's gapped (non-prelim): 3499
length of query: 580
length of database: 191,569,459
effective HSP length: 123
effective length of query: 457
effective length of database: 125,196,691
effective search space: 57214887787
effective search space used: 57214887787
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)