Query 043149
Match_columns 344
No_of_seqs 337 out of 3182
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 23:35:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043149.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043149hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 3.4E-30 1.1E-34 217.4 15.4 146 1-160 19-164 (169)
2 3f6q_A Integrin-linked protein 99.9 1.3E-26 4.5E-31 196.3 15.5 147 1-160 20-166 (179)
3 3v30_A DNA-binding protein rfx 99.9 1.6E-26 5.5E-31 194.2 13.9 147 1-160 17-163 (172)
4 1ihb_A P18-INK4C(INK6), cyclin 99.9 2.1E-26 7.2E-31 191.2 13.4 142 1-157 20-162 (162)
5 1d9s_A Cyclin-dependent kinase 99.9 8.7E-27 3E-31 188.7 10.6 133 11-157 3-136 (136)
6 2y1l_E Darpin-8.4; hydrolase-i 99.9 4.8E-26 1.6E-30 191.1 15.4 141 1-155 29-169 (169)
7 3twr_A Tankyrase-2; ankyrin re 99.9 5.1E-26 1.7E-30 189.8 14.1 141 2-156 24-164 (165)
8 3v31_A Ankyrin repeat family A 99.9 7.6E-26 2.6E-30 189.1 13.6 144 2-159 19-162 (167)
9 4b93_B Ankyrin repeat domain-c 99.9 6.7E-26 2.3E-30 205.1 14.0 146 2-161 69-214 (269)
10 1oy3_D Transcription factor in 99.9 1.6E-25 5.3E-30 202.0 14.4 153 1-160 24-220 (282)
11 2rfm_A Putative ankyrin repeat 99.9 1.7E-25 5.7E-30 191.4 13.9 139 11-162 26-164 (192)
12 1yyh_A HN1;, notch 1, ankyrin 99.9 1.9E-25 6.5E-30 199.6 14.5 148 1-160 38-185 (253)
13 3hra_A Ankyrin repeat family p 99.9 7.3E-25 2.5E-29 188.2 17.0 153 2-160 21-173 (201)
14 2f8y_A Notch homolog 1, transl 99.9 7.2E-25 2.5E-29 191.3 16.7 147 2-160 7-153 (223)
15 1s70_B 130 kDa myosin-binding 99.9 9.1E-25 3.1E-29 199.2 17.7 153 1-161 55-261 (299)
16 1ikn_D Protein (I-kappa-B-alph 99.9 1.8E-25 6.3E-30 197.3 12.7 153 2-161 24-180 (236)
17 1awc_B Protein (GA binding pro 99.9 5.1E-25 1.8E-29 181.6 14.5 135 2-151 18-152 (153)
18 1ikn_D Protein (I-kappa-B-alph 99.9 1.4E-25 5E-30 197.9 11.9 148 1-161 60-213 (236)
19 2rfa_A Transient receptor pote 99.9 9.3E-25 3.2E-29 192.0 16.6 153 1-159 18-185 (232)
20 3hra_A Ankyrin repeat family p 99.9 5.6E-25 1.9E-29 188.9 14.8 143 1-155 54-201 (201)
21 3aji_A 26S proteasome non-ATPa 99.9 9.4E-25 3.2E-29 191.6 16.2 147 2-161 22-168 (231)
22 2f8y_A Notch homolog 1, transl 99.9 9.9E-25 3.4E-29 190.5 16.0 149 1-162 40-188 (223)
23 3utm_A Tankyrase-1; tankyrase, 99.9 1.2E-24 4.2E-29 201.9 17.1 152 1-160 73-308 (351)
24 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.6E-24 5.5E-29 171.5 14.8 126 19-157 1-126 (126)
25 1bd8_A P19INK4D CDK4/6 inhibit 99.9 8E-25 2.7E-29 180.6 13.5 138 2-154 18-155 (156)
26 2xai_A ASB-9, ankyrin repeat a 99.9 1.2E-24 4.1E-29 195.4 15.7 145 1-160 18-162 (261)
27 1oy3_D Transcription factor in 99.9 1.1E-24 3.9E-29 196.4 14.5 97 14-116 3-101 (282)
28 2rfm_A Putative ankyrin repeat 99.9 7.1E-25 2.4E-29 187.5 12.3 141 1-155 50-190 (192)
29 2jab_A H10-2-G3; HER2, darpin, 99.9 1E-24 3.4E-29 176.5 12.4 128 15-155 9-136 (136)
30 4gpm_A Engineered protein OR26 99.9 2.6E-24 8.9E-29 181.3 15.3 127 22-161 6-132 (169)
31 2dzn_A Probable 26S proteasome 99.9 2.7E-24 9.2E-29 188.2 15.8 149 2-160 18-169 (228)
32 3b7b_A Euchromatic histone-lys 99.9 3.1E-24 1.1E-28 189.0 15.4 146 2-160 27-172 (237)
33 1yyh_A HN1;, notch 1, ankyrin 99.9 1.7E-24 5.7E-29 193.5 13.8 147 1-160 72-218 (253)
34 3c5r_A BARD-1, BRCA1-associate 99.9 8.6E-25 3E-29 176.8 10.8 130 15-157 5-134 (137)
35 3d9h_A CDNA FLJ77766, highly s 99.9 7.2E-24 2.5E-28 193.0 17.3 145 1-160 74-218 (285)
36 3twr_A Tankyrase-2; ankyrin re 99.9 3.3E-24 1.1E-28 178.7 13.5 135 15-161 3-137 (165)
37 1bi7_B P16INK4A, MTS1, multipl 99.9 5.8E-25 2E-29 182.1 8.9 134 13-160 5-139 (156)
38 1k1a_A B-cell lymphoma 3-encod 99.9 6.5E-24 2.2E-28 187.1 16.2 150 2-160 25-178 (241)
39 3aji_A 26S proteasome non-ATPa 99.9 3.4E-24 1.2E-28 188.0 14.2 148 1-162 55-202 (231)
40 2rfa_A Transient receptor pote 99.9 2.6E-24 9E-29 189.1 13.3 147 1-160 52-225 (232)
41 2dzn_A Probable 26S proteasome 99.9 8.9E-24 3E-28 184.8 16.2 149 1-160 51-203 (228)
42 2etb_A Transient receptor pote 99.9 2E-24 6.9E-29 192.9 12.2 147 1-160 61-249 (256)
43 2pnn_A Transient receptor pote 99.9 1.6E-24 5.4E-29 195.6 11.4 147 1-160 72-262 (273)
44 3jxi_A Vanilloid receptor-rela 99.9 8.3E-25 2.8E-29 195.7 9.4 146 2-160 65-253 (260)
45 2vge_A RELA-associated inhibit 99.9 2E-24 6.9E-29 190.7 11.6 146 2-160 1-151 (229)
46 4b93_B Ankyrin repeat domain-c 99.9 1.7E-24 5.7E-29 195.9 11.2 144 1-158 101-245 (269)
47 3v31_A Ankyrin repeat family A 99.9 1.2E-23 4.2E-28 175.6 14.7 130 19-161 2-131 (167)
48 3f6q_A Integrin-linked protein 99.9 3.1E-23 1E-27 175.4 17.0 131 18-160 3-133 (179)
49 4g8k_A 2-5A-dependent ribonucl 99.9 1.2E-23 4.1E-28 195.6 15.5 153 1-160 40-301 (337)
50 3v30_A DNA-binding protein rfx 99.9 1.5E-23 5E-28 176.0 14.0 129 20-160 2-130 (172)
51 4hbd_A KN motif and ankyrin re 99.9 5.8E-24 2E-28 192.9 12.2 140 12-163 103-248 (276)
52 1k1a_A B-cell lymphoma 3-encod 99.9 3.4E-23 1.2E-27 182.5 16.1 138 13-162 2-146 (241)
53 1wdy_A 2-5A-dependent ribonucl 99.9 3.3E-23 1.1E-27 186.5 16.3 148 1-160 120-281 (285)
54 3b7b_A Euchromatic histone-lys 99.9 3.6E-23 1.2E-27 182.2 15.9 137 13-161 4-140 (237)
55 1sw6_A Regulatory protein SWI6 99.9 8.3E-24 2.8E-28 196.5 12.2 145 3-160 114-311 (327)
56 3kea_A K1L; tropism, ANK repea 99.9 7.8E-24 2.7E-28 192.9 11.5 145 1-161 77-224 (285)
57 3aaa_C Myotrophin, protein V-1 99.9 1.6E-23 5.4E-28 166.3 11.6 111 17-135 4-114 (123)
58 3ljn_A Hypothetical protein; a 99.9 1.4E-23 4.8E-28 197.1 13.2 136 16-159 134-271 (364)
59 2etb_A Transient receptor pote 99.9 4.2E-24 1.5E-28 190.8 9.2 145 3-159 23-208 (256)
60 1ycs_B 53BP2, P53BP2; ankyrin 99.9 4.2E-24 1.4E-28 189.5 9.0 146 2-160 21-167 (239)
61 3ljn_A Hypothetical protein; a 99.9 2.4E-23 8.2E-28 195.5 14.5 147 1-157 35-198 (364)
62 3ehr_A Osteoclast-stimulating 99.9 1.1E-23 3.7E-28 184.4 10.5 135 14-160 67-201 (222)
63 1n11_A Ankyrin; clathrin, BAND 99.9 3.9E-23 1.3E-27 198.7 15.3 145 2-160 228-372 (437)
64 2y1l_E Darpin-8.4; hydrolase-i 99.9 5.2E-23 1.8E-27 172.5 14.1 134 14-160 8-141 (169)
65 3kea_A K1L; tropism, ANK repea 99.9 3.5E-23 1.2E-27 188.5 13.4 142 2-160 15-157 (285)
66 4hbd_A KN motif and ankyrin re 99.9 2.1E-23 7.1E-28 189.2 11.6 142 1-155 126-273 (276)
67 3eu9_A Huntingtin-interacting 99.9 1E-22 3.5E-27 178.8 15.0 147 3-162 59-207 (240)
68 1awc_B Protein (GA binding pro 99.9 8.8E-23 3E-27 168.1 13.4 127 20-160 2-128 (153)
69 2fo1_E LIN-12 protein; beta-ba 99.9 7E-23 2.4E-27 193.6 12.9 151 3-160 150-341 (373)
70 2pnn_A Transient receptor pote 99.9 5.8E-23 2E-27 185.3 11.2 134 15-160 49-221 (273)
71 3t8k_A Uncharacterized protein 99.9 2.1E-23 7.2E-28 178.4 7.9 137 3-155 23-177 (186)
72 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.2E-22 4E-27 167.5 12.0 128 19-160 1-128 (156)
73 3deo_A Signal recognition part 99.9 7.2E-23 2.5E-27 174.0 10.8 111 16-135 40-151 (183)
74 1wdy_A 2-5A-dependent ribonucl 99.9 4.4E-22 1.5E-26 179.1 16.4 147 1-160 20-177 (285)
75 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.4E-22 4.7E-27 168.1 11.8 127 18-158 3-129 (162)
76 3jxi_A Vanilloid receptor-rela 99.9 4.9E-23 1.7E-27 184.2 9.5 145 8-160 31-213 (260)
77 1n11_A Ankyrin; clathrin, BAND 99.9 4.3E-22 1.5E-26 191.4 15.7 145 2-160 30-174 (437)
78 3utm_A Tankyrase-1; tankyrase, 99.9 8.9E-22 3.1E-26 182.5 17.0 150 2-161 40-243 (351)
79 2xai_A ASB-9, ankyrin repeat a 99.9 1.3E-21 4.5E-26 175.5 16.9 129 19-161 2-130 (261)
80 2fo1_E LIN-12 protein; beta-ba 99.9 2E-22 6.7E-27 190.5 11.9 134 13-158 228-372 (373)
81 3d9h_A CDNA FLJ77766, highly s 99.9 2.4E-21 8.3E-26 176.3 18.0 135 13-161 52-186 (285)
82 3eu9_A Huntingtin-interacting 99.9 1.5E-21 5.1E-26 171.3 16.0 147 2-161 25-172 (240)
83 1s70_B 130 kDa myosin-binding 99.9 7.8E-22 2.7E-26 179.7 14.7 140 1-154 88-287 (299)
84 1sw6_A Regulatory protein SWI6 99.9 1.1E-22 3.8E-27 188.9 8.1 133 1-135 146-324 (327)
85 4g8k_A 2-5A-dependent ribonucl 99.9 1.5E-21 5.3E-26 181.2 14.8 143 2-160 184-329 (337)
86 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.7E-22 1.3E-26 176.9 9.5 131 17-161 2-132 (239)
87 3ui2_A Signal recognition part 99.9 4.8E-22 1.7E-26 177.0 10.1 133 16-157 41-185 (244)
88 1bi7_B P16INK4A, MTS1, multipl 99.9 4.3E-22 1.5E-26 164.7 7.6 125 1-135 27-152 (156)
89 1dcq_A PYK2-associated protein 99.8 1.4E-20 4.8E-25 171.0 13.7 129 20-160 130-266 (278)
90 2l6b_A NR1C; ankyrin, consensu 99.8 3.6E-21 1.2E-25 150.6 8.2 110 14-131 3-112 (115)
91 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.7E-20 5.9E-25 141.3 11.3 91 19-116 1-91 (93)
92 3lvq_E ARF-GAP with SH3 domain 99.8 1.1E-20 3.9E-25 185.2 13.1 128 20-160 132-268 (497)
93 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.4E-20 8.3E-25 140.4 10.8 93 53-157 1-93 (93)
94 2jab_A H10-2-G3; HER2, darpin, 99.8 3.4E-20 1.2E-24 149.6 12.2 108 1-116 29-136 (136)
95 2b0o_E UPLC1; arfgap, structur 99.8 1.6E-20 5.5E-25 172.5 11.2 128 19-159 150-286 (301)
96 3jue_A Arfgap with coiled-coil 99.8 1.9E-20 6.6E-25 176.5 11.4 131 16-159 195-328 (368)
97 2vge_A RELA-associated inhibit 99.8 4.4E-21 1.5E-25 169.3 6.2 142 1-159 36-180 (229)
98 3t8k_A Uncharacterized protein 99.8 1.9E-20 6.4E-25 160.0 9.2 133 19-161 5-150 (186)
99 1d9s_A Cyclin-dependent kinase 99.8 2.3E-20 7.8E-25 150.7 8.7 109 1-119 27-136 (136)
100 2b0o_E UPLC1; arfgap, structur 99.8 5.6E-20 1.9E-24 168.9 10.3 119 2-135 167-294 (301)
101 1n0r_A 4ANK, 4 ankyrin repeats 99.8 3E-19 1E-23 140.9 12.6 110 1-119 17-126 (126)
102 3ehr_A Osteoclast-stimulating 99.8 1.1E-19 3.7E-24 158.8 6.6 120 1-128 88-207 (222)
103 3c5r_A BARD-1, BRCA1-associate 99.8 1.7E-18 5.9E-23 139.5 11.3 101 49-161 5-105 (137)
104 1dcq_A PYK2-associated protein 99.8 1.3E-18 4.4E-23 158.0 11.4 108 2-116 146-261 (278)
105 2l6b_A NR1C; ankyrin, consensu 99.8 7.6E-19 2.6E-23 137.3 8.2 100 49-160 4-103 (115)
106 3lvq_E ARF-GAP with SH3 domain 99.8 1.6E-18 5.4E-23 170.0 12.0 116 2-126 148-272 (497)
107 3jue_A Arfgap with coiled-coil 99.8 2.6E-18 9E-23 161.9 12.1 126 2-135 216-345 (368)
108 3aaa_C Myotrophin, protein V-1 99.7 6E-18 2.1E-22 133.8 10.6 99 50-160 3-101 (123)
109 2aja_A Ankyrin repeat family p 99.7 4.8E-20 1.7E-24 174.3 -2.4 131 17-156 89-223 (376)
110 2zgd_A 3 repeat synthetic anky 99.7 5.9E-18 2E-22 131.6 9.2 95 11-112 15-109 (110)
111 2zgd_A 3 repeat synthetic anky 99.7 1.8E-17 6.3E-22 128.7 9.2 96 44-151 14-109 (110)
112 3deo_A Signal recognition part 99.7 2.4E-17 8.3E-22 139.7 10.1 121 2-154 60-181 (183)
113 2aja_A Ankyrin repeat family p 99.7 7.7E-19 2.6E-23 166.0 0.7 140 1-160 107-253 (376)
114 3ui2_A Signal recognition part 99.7 2.8E-17 9.7E-22 146.0 10.1 92 2-102 61-153 (244)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=3.4e-30 Score=217.43 Aligned_cols=146 Identities=25% Similarity=0.389 Sum_probs=132.2
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
+|+.||+.+.+ ++.+|.+|+||||+|+..|+.++++.|++. +.+++.+|.+|+||||+|+.+|+.+++++|+++|.+
T Consensus 19 ~v~~Ll~~Gad-vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~-gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad- 95 (169)
T 4gpm_A 19 RVKDLIENGAD-VNASDSDGRTPLHHAAENGHKEVVKLLISK-GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD- 95 (169)
T ss_dssp HHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-
T ss_pred HHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhc-ccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCC-
Confidence 47889998887 899999999999999999999999888876 788999999999999999999999999999996644
Q ss_pred CccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 81 NMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 81 ~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
+|.+|.+|+||||+|+..|+.+++++|+++| ++++.+|.+|+|||++|+ ..++.+++++|+++||++..
T Consensus 96 -----vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~G~TpL~~A~-----~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 96 -----VNAKDSDGRTPLHHAAENGHKEVVKLLISKG-ADVNTSDSDGRTPLDLAR-----EHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp -----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHTC------
T ss_pred -----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHH-----HcCCHHHHHHHHHCCCCcCC
Confidence 7889999999999999999999999999999 999999999999999999 88999999999999999764
No 2
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=1.3e-26 Score=196.26 Aligned_cols=147 Identities=21% Similarity=0.269 Sum_probs=136.8
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
+|+.||+.++..++.+|..|.||||+|+..|+.++++.|++. +.+++..|..|+||||+|+..|+.+++++|+++|.
T Consensus 20 ~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-- 96 (179)
T 3f6q_A 20 AVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR-GARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKA-- 96 (179)
T ss_dssp HHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC--
T ss_pred HHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC--
Confidence 367899988888999999999999999999999999888876 78889999999999999999999999999999654
Q ss_pred CccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 81 NMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 81 ~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
.++.+|.+|+||||+|+..|+.+++++|+++| ++++.+|..|.||+++|+ ..++.+++++|++.|++++.
T Consensus 97 ----~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~-----~~~~~~~~~~L~~~g~~~~~ 166 (179)
T 3f6q_A 97 ----DINAVNEHGNVPLHYACFWGQDQVAEDLVANG-ALVSICNKYGEMPVDKAK-----APLRELLRERAEKMGQNLNR 166 (179)
T ss_dssp ----CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCSSBCCTTSCCGGGGSC-----HHHHHHHHHHHHHTTCCCSC
T ss_pred ----CCCccCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCcchhccCCCCcHHHHH-----HHHHHHHHHHHHHhhcCccc
Confidence 47789999999999999999999999999999 999999999999999999 88899999999999999986
No 3
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.94 E-value=1.6e-26 Score=194.15 Aligned_cols=147 Identities=16% Similarity=0.209 Sum_probs=136.2
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
+++.||+.++..++.+|..|.||||+|+..|+.++++.|++. +.+++..|..|+||||+|+..|+.+++++|++++.
T Consensus 17 ~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-- 93 (172)
T 3v30_A 17 QLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEW-GADPHILAKERESALSLASTGGYTDIVGLLLERDV-- 93 (172)
T ss_dssp HHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC--
T ss_pred HHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCC--
Confidence 368899999988999999999999999999999999999987 67889999999999999999999999999999654
Q ss_pred CccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 81 NMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 81 ~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
.++.+|..|+||||+|+..|+.+++++|++++ ++++.+|..|.||+|+|+ ..++.+++++|+++|++...
T Consensus 94 ----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~-----~~~~~~~~~~L~~~~~~~~~ 163 (172)
T 3v30_A 94 ----DINIYDWNGGTPLLYAVRGNHVKCVEALLARG-ADLTTEADSGYTPMDLAV-----ALGYRKVQQVIENHILKLFQ 163 (172)
T ss_dssp ----CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH-----HHTCHHHHHHHHHHHHHHSC
T ss_pred ----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHH-----HhCcHHHHHHHHHHHHHHhc
Confidence 47789999999999999999999999999999 999999999999999999 88899999999999887665
No 4
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=2.1e-26 Score=191.24 Aligned_cols=142 Identities=25% Similarity=0.351 Sum_probs=128.7
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
+++.|++.+.+ ++.+|..|+||||+|+. |+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++++.
T Consensus 20 ~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-- 94 (162)
T 1ihb_A 20 QLTSLLQNNVN-VNAQNGFGRTALQVMKL-GNPEIARRLLLR-GANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQA-- 94 (162)
T ss_dssp HHHHHTTSCCC-TTCCCTTSCCHHHHCCS-SCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC--
T ss_pred HHHHHHhCCCC-ccccCccCccHHHHHHc-CcHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC--
Confidence 36788887766 78999999999999999 999999988886 77889999999999999999999999999999654
Q ss_pred CccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcc-cccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCC
Q 043149 81 NMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQ-INARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGR 157 (344)
Q Consensus 81 ~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~-~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~ 157 (344)
.++.+|.+|+||||+|+..|+.+++++|++++ ++ ++.+|..|.||+|+|+ ..++.+++++|+++||+
T Consensus 95 ----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~g~t~l~~A~-----~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 95 ----DVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT-ASNVGHRNHKGDTACDLAR-----LYGRNEVVSLMQANGAG 162 (162)
T ss_dssp ----CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS-CCCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHHTC--
T ss_pred ----CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcc-CCCCCCcCCCCCcHHHHHH-----HcCCHHHHHHHHHhCCC
Confidence 47789999999999999999999999999999 55 7999999999999999 88999999999999985
No 5
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=8.7e-27 Score=188.67 Aligned_cols=133 Identities=12% Similarity=0.138 Sum_probs=124.3
Q ss_pred ccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccC
Q 043149 11 NLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKN 90 (344)
Q Consensus 11 ~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d 90 (344)
..++.+|.+|.||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+. |+.+++++|++++.+ ++.+|
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~------~~~~~ 74 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEA-GADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE------PNCAD 74 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC------SSCCB
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHc-CCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC------CCCcC
Confidence 34788999999999999999999999999987 77889999999999999999 999999999996544 77899
Q ss_pred CC-CCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCC
Q 043149 91 DE-GNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGR 157 (344)
Q Consensus 91 ~~-G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~ 157 (344)
.. |+||||+|+..|+.+++++|++++ ++++.+|..|+||+|+|+ ..++.+++++|+++|++
T Consensus 75 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~-----~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 75 PATLTRPVHDAAREGFLDTLVVLHRAG-ARLDVCDAWGRLPVDLAE-----EQGHRDIARYLHAATGD 136 (136)
T ss_dssp TTTTBCHHHHHHHHTCHHHHHHHHHTC-CCCCCCSSSSSCHHHHHH-----HHTCHHHHHHHHHHHCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCC
Confidence 99 999999999999999999999999 999999999999999999 88899999999999985
No 6
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=4.8e-26 Score=191.09 Aligned_cols=141 Identities=27% Similarity=0.369 Sum_probs=114.9
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
+|+.|++.+.+ ++.+|.+|.||||+|+..|+.++++.|++. +.+++..|..|+||||+|+..|+.+++++|++++.+
T Consensus 29 ~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~- 105 (169)
T 2y1l_E 29 EVRILMANGAD-VNAEDASGWTPLHLAAFNGHLEIVEVLLKN-GADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGAD- 105 (169)
T ss_dssp HHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-
T ss_pred HHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-
Confidence 36677777665 777888888888888888888888877775 667778888888888888888888888888885543
Q ss_pred CccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcC
Q 043149 81 NMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAG 155 (344)
Q Consensus 81 ~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~g 155 (344)
++.+|.+|+||||+|+..|+.+++++|++++ ++++.+|..|.||+++|+ ..++.+++++|++.|
T Consensus 106 -----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~-----~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 106 -----VNANDMEGHTPLHLAAMFGHLEIVEVLLKNG-ADVNAQDKFGKTAFDISI-----DNGNEDLAEILQKLN 169 (169)
T ss_dssp -----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHTC-
T ss_pred -----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHH-----HhCCHHHHHHHHHcC
Confidence 6677888888888888888888888888888 888888888888888888 777888888888765
No 7
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=5.1e-26 Score=189.80 Aligned_cols=141 Identities=21% Similarity=0.266 Sum_probs=98.7
Q ss_pred HHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccC
Q 043149 2 VLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVN 81 (344)
Q Consensus 2 v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ 81 (344)
++.|++.++..++..+..|.||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++++.
T Consensus 24 v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--- 99 (165)
T 3twr_A 24 VKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQH-GADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGA--- 99 (165)
T ss_dssp HHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC---
T ss_pred HHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhc-CCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCC---
Confidence 45666666666666777777777777777777777666665 56667777777777777777777777777777543
Q ss_pred ccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCC
Q 043149 82 MDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGG 156 (344)
Q Consensus 82 ~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga 156 (344)
.++.+|..|+||||+|+..|+.+++++|++++ ++++.+|..|+||+|+|. . ++.+++++|++.|+
T Consensus 100 ---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~a~-----~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 100 ---VVNVADLWKFTPLHEAAAKGKYEICKLLLQHG-ADPTKKNRDGNTPLDLVK-----D-GDTDIQDLLRGDAA 164 (165)
T ss_dssp ---CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCTGGGSC-----T-TCHHHHHHHHTC--
T ss_pred ---CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCChhHhHh-----c-CChHHHHHHhhccc
Confidence 35566777777777777777777777777777 777777777777777765 4 55677777777664
No 8
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.93 E-value=7.6e-26 Score=189.09 Aligned_cols=144 Identities=15% Similarity=0.225 Sum_probs=110.4
Q ss_pred HHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccC
Q 043149 2 VLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVN 81 (344)
Q Consensus 2 v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ 81 (344)
++.|++.+.+ ++.+|.+|.||||+|+..|+.++++.|++. +.+++..|..|+||||+|+..|+.+++++|++++.+
T Consensus 19 v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-- 94 (167)
T 3v31_A 19 LATRIEQENV-INHTDEEGFTPLMWAAAHGQIAVVEFLLQN-GADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVD-- 94 (167)
T ss_dssp HHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC--
T ss_pred HHHHHHcCCC-cCCCCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCC--
Confidence 5667776654 777788888888888888888888777765 666777777888888888888888888888875433
Q ss_pred ccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCC
Q 043149 82 MDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRER 159 (344)
Q Consensus 82 ~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~ 159 (344)
++.+|.+|+||||+|+..|+.+++++|++++ ++++.+|..|.||+++|+ ..++.+++++|++++++..
T Consensus 95 ----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~-----~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 95 ----VNEYDWNGGTPLLYAVHGNHVKCVKMLLESG-ADPTIETDSGYNSMDLAV-----ALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp ----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH-----HHTCHHHHHHHHHHHHHHC
T ss_pred ----CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHH-----HcCcHHHHHHHHHHHHHHH
Confidence 5667778888888888888888888888877 788888888888888888 7777888888877755543
No 9
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.93 E-value=6.7e-26 Score=205.13 Aligned_cols=146 Identities=24% Similarity=0.277 Sum_probs=130.8
Q ss_pred HHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccC
Q 043149 2 VLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVN 81 (344)
Q Consensus 2 v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ 81 (344)
++.|++.+.+ ++.+|.+|+||||+||..|+.++++.|+.. +.+++..+.+|.||+|+|+..++.+++++|++.|.
T Consensus 69 v~~Ll~~Gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~--- 143 (269)
T 4b93_B 69 LAKVPASGLG-VNVTSQDGSSPLHVAALHGRADLIPLLLKH-GANAGARNADQAVPLHLACQQGHFQVVKCLLDSNA--- 143 (269)
T ss_dssp ------CCCC-TTCCCTTSCCHHHHHHHTTCTTHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC---
T ss_pred HHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHhc-CCCcCccCCCCCCccccccccChHHHHHHHHHCCC---
Confidence 4567776666 899999999999999999999999888876 77888999999999999999999999999999654
Q ss_pred ccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCCC
Q 043149 82 MDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERSS 161 (344)
Q Consensus 82 ~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~~ 161 (344)
.+|.+|.+|+||||+|+..|+.+++++|+++| +++|.+|..|.||||+|+ ..++.+++++|+++|++++..
T Consensus 144 ---~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~g-advn~~~~~g~t~Lh~A~-----~~g~~~~v~~Ll~~Gad~~~~ 214 (269)
T 4b93_B 144 ---KPNKKDLSGNTPLIYACSGGHHELVALLLQHG-ASINASNNKGNTALHEAV-----IEKHVFVVELLLLHGASVQVL 214 (269)
T ss_dssp ---CSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTT-CCTTCBCTTSCBHHHHHH-----HTTCHHHHHHHHHTTCCSCCC
T ss_pred ---CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC-CCCCccccCCCcHHHHHH-----HcCCHHHHHHHHHCCCCCCCc
Confidence 47789999999999999999999999999999 999999999999999999 889999999999999998873
No 10
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.93 E-value=1.6e-25 Score=202.02 Aligned_cols=153 Identities=22% Similarity=0.263 Sum_probs=119.2
Q ss_pred CHHHHHhcCCc--cccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchh
Q 043149 1 MVLRLIDFDRN--LVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLR 78 (344)
Q Consensus 1 ~v~~LL~~~~~--~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~ 78 (344)
+|+.||+.+.+ .++.+|..|.||||+|+..|+.++++.|++. +..++.+|..|+||||+|+..|+.+++++|++++.
T Consensus 24 ~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 102 (282)
T 1oy3_D 24 FLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAA-GAGVLVAERGGHTALHLACRVRAHTCACVLLQPRP 102 (282)
T ss_dssp HHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCC
T ss_pred HHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCC
Confidence 36777876554 4778888899999999999999999888875 67788888888889988888888888888887654
Q ss_pred ccC-----------------------------------------ccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccC
Q 043149 79 YVN-----------------------------------------MDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVR 117 (344)
Q Consensus 79 ~~~-----------------------------------------~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~ 117 (344)
+.. ....++.+|..|+||||+|+..|+.+++++|++++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g- 181 (282)
T 1oy3_D 103 SHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAG- 181 (282)
T ss_dssp SSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-
T ss_pred CCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcC-
Confidence 311 12347777888888888888888888888888877
Q ss_pred cccccccCC-CCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 118 DQINARNSK-DNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 118 ~~~~~~n~~-G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
++++.++.. |+||||+|+ ..++.+++++|+++|++++.
T Consensus 182 ~~~~~~~~~~g~tpL~~A~-----~~~~~~~v~~Ll~~gad~~~ 220 (282)
T 1oy3_D 182 ADLNKPEPTCGRTPLHLAV-----EAQAASVLELLLKAGADPTA 220 (282)
T ss_dssp CCTTCCCTTTCCCHHHHHH-----HTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCCCCCCcCHHHHHH-----HcCCHHHHHHHHHcCCCCcc
Confidence 777777754 888888888 67777888888888877766
No 11
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.93 E-value=1.7e-25 Score=191.44 Aligned_cols=139 Identities=22% Similarity=0.174 Sum_probs=126.0
Q ss_pred ccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccC
Q 043149 11 NLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKN 90 (344)
Q Consensus 11 ~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d 90 (344)
.+++.+|..|+||||+|+..|+.++++.|++. +..++..|..|+||||+|+..|+.+++++|++++.+ ++.+|
T Consensus 26 ~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~ 98 (192)
T 2rfm_A 26 FLRNYRDSYNRTPLMVACMLGMENAIDKLVEN-FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN------VNTKD 98 (192)
T ss_dssp HHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHH-HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC------TTCCC
T ss_pred HHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHh-ccccccccccCccHHHHHHHcCCHHHHHHHHHCCCC------CCCCC
Confidence 45678899999999999999999999999987 667888899999999999999999999999996543 67789
Q ss_pred CCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCCCC
Q 043149 91 DEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERSSL 162 (344)
Q Consensus 91 ~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~~~ 162 (344)
..|+||||+|+..|+.+++++|++++ ++++.+|..|.||||+|+ ..++.+++++|+++|++++...
T Consensus 99 ~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~ga~~~~~~ 164 (192)
T 2rfm_A 99 FSGKTPLMWSIIFGYSEMSYFLLEHG-ANVNDRNLEGETPLIVAS-----KYGRSEIVKKLLELGADISARD 164 (192)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTT-CCSSCCCTTCCCHHHHHH-----HHTCHHHHHHHHHTTCCTTCBC
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHH-----HcCCHHHHHHHHHCCCCCCCcC
Confidence 99999999999999999999999998 999999999999999999 8889999999999999987643
No 12
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.93 E-value=1.9e-25 Score=199.64 Aligned_cols=148 Identities=18% Similarity=0.174 Sum_probs=93.2
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
+++.|++.+++..+..|.+|.||||+|+..|+.++++.|++. +.+++..|..|+||||+|+..|+.+++++|++.+..
T Consensus 38 ~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~- 115 (253)
T 1yyh_A 38 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEA-SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT- 115 (253)
T ss_dssp --------------CCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTS-
T ss_pred HHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-
Confidence 467778888776666788888888888888888888777775 677778888888888888888888888888876531
Q ss_pred CccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 81 NMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 81 ~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
.++..|.+|.||||+|+..|+.+++++|++++ ++++.+|..|.||||+|+ ..++.+++++|+++|++++.
T Consensus 116 ----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~-----~~~~~~~v~~Ll~~ga~~~~ 185 (253)
T 1yyh_A 116 ----DLDARMHDGTTPLILAARLAVEGMLEDLINSH-ADVNAVDDLGKSALHWAA-----AVNNVDAAVVLLKNGANKDM 185 (253)
T ss_dssp ----CTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTT-CCTTCBCTTSCBHHHHHH-----HHTCHHHHHHHHHTTCCTTC
T ss_pred ----CccccCCCCCcHHHHHHHcChHHHHHHHHHcC-CCCCCcCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCCCC
Confidence 24455556666666666666666666666655 566666666666666666 55555666666666655544
No 13
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.93 E-value=7.3e-25 Score=188.24 Aligned_cols=153 Identities=19% Similarity=0.225 Sum_probs=137.3
Q ss_pred HHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccC
Q 043149 2 VLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVN 81 (344)
Q Consensus 2 v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ 81 (344)
|+.||+.++..++..|.+|.||||+|+..|+.++++.|++. +.+++..|..|+||||+|+..|+.+++++|++.+
T Consensus 21 v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~---- 95 (201)
T 3hra_A 21 VKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDR-GADINLQNSISDSPYLYAGAQGRTEILAYMLKHA---- 95 (201)
T ss_dssp HHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS----
T ss_pred HHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcc----
Confidence 67889888867999999999999999999999999988886 7888999999999999999999999999999642
Q ss_pred ccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 82 MDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 82 ~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
...++..|..|+||||+|+..|+.+++++|+++++++++.+|..|+||||+|+....+..++.+++++|+++|++++.
T Consensus 96 -~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~ 173 (201)
T 3hra_A 96 -TPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSI 173 (201)
T ss_dssp -CCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTC
T ss_pred -CcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCc
Confidence 345788999999999999999999999999999888999999999999999994433344459999999999999886
No 14
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.93 E-value=7.2e-25 Score=191.35 Aligned_cols=147 Identities=18% Similarity=0.176 Sum_probs=82.2
Q ss_pred HHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccC
Q 043149 2 VLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVN 81 (344)
Q Consensus 2 v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ 81 (344)
++.|++.+.+..+..|.+|.||||+|+..|+.++++.|++. +..++..|..|+||||+|+..|+.+++++|++.+.
T Consensus 7 i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~--- 82 (223)
T 2f8y_A 7 ISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEA-SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRA--- 82 (223)
T ss_dssp EETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTT---
T ss_pred HHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC---
Confidence 44556666654444566666666666666666666666654 45556666666666666666666666666666432
Q ss_pred ccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 82 MDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 82 ~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
..++..|.+|.||||+|+..|+.+++++|++++ ++++.+|..|.||||+|+ ..++.+++++|+++|++++.
T Consensus 83 --~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~ 153 (223)
T 2f8y_A 83 --TDLDARMHDGTTPLILAARLAVEGMLEDLINSH-ADVNAVDDLGKSALHWAA-----AVNNVDAAVVLLKNGANKDM 153 (223)
T ss_dssp --SCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHH-----HTTCHHHHHHHHHTTCCTTC
T ss_pred --CCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcC-CCCcCcCCCCCcHHHHHH-----HcCCHHHHHHHHHcCCCCCC
Confidence 123444455555555555555555555555554 455555555555555555 44445555555555554443
No 15
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.93 E-value=9.1e-25 Score=199.18 Aligned_cols=153 Identities=19% Similarity=0.216 Sum_probs=135.6
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
+|+.||+.+.+ ++..|.+|.||||+||..|+.++++.|++. +.+++..|..|+||||+|+..|+.+++++|+++|.++
T Consensus 55 ~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 132 (299)
T 1s70_B 55 EVLRLLERGAD-INYANVDGLTALHQACIDDNVDMVKFLVEN-GANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHV 132 (299)
T ss_dssp HHHHHHHHCCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Confidence 36788988877 889999999999999999999999988885 7889999999999999999999999999999987764
Q ss_pred Cccc------------------------------------------------------cccccCCCCCcHHHHHHHCCcH
Q 043149 81 NMDD------------------------------------------------------ILNWKNDEGNTLLHISISRSHI 106 (344)
Q Consensus 81 ~~~~------------------------------------------------------~ln~~d~~G~TpLH~Aa~~g~~ 106 (344)
+... .....+..|.||||+|+..|+.
T Consensus 133 ~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~ 212 (299)
T 1s70_B 133 GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYT 212 (299)
T ss_dssp TCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCH
T ss_pred CCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcH
Confidence 3110 0112456799999999999999
Q ss_pred HHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCCC
Q 043149 107 QIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERSS 161 (344)
Q Consensus 107 ~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~~ 161 (344)
+++++|+++| ++++.+|..|.||||+|+ ..++.+++++|+++|++++..
T Consensus 213 ~~v~~Ll~~g-~d~~~~d~~g~tpL~~A~-----~~~~~~~v~~Ll~~gad~~~~ 261 (299)
T 1s70_B 213 EVLKLLIQAR-YDVNIKDYDGWTPLHAAA-----HWGKEEACRILVENLCDMEAV 261 (299)
T ss_dssp HHHHHHHTTT-CCTTCCCTTCCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHHcC-CCCCCcCCCCCcHHHHHH-----hcCCHHHHHHHHHcCCCCCCc
Confidence 9999999999 999999999999999999 889999999999999998763
No 16
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=1.8e-25 Score=197.26 Aligned_cols=153 Identities=22% Similarity=0.262 Sum_probs=129.3
Q ss_pred HHHHHhcCCc---cccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchh
Q 043149 2 VLRLIDFDRN---LVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLR 78 (344)
Q Consensus 2 v~~LL~~~~~---~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~ 78 (344)
++.|++.... .++.+|..|.||||+|+..|+.++++.|++. +..++.+|..|+||||+|+..|+.+++++|++.+.
T Consensus 24 v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 102 (236)
T 1ikn_D 24 TMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA-GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCT 102 (236)
T ss_dssp SSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSC-CCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTT
T ss_pred HHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 4556665543 5788899999999999999999999877765 77888889999999999999999999999999887
Q ss_pred ccCccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccC-CCCCHHHHHhhhcCCCccHHHHHHHHHHcCCC
Q 043149 79 YVNMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNS-KDNTAMDMVKFHLQTKPEFEELKSMVRKAGGR 157 (344)
Q Consensus 79 ~~~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~-~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~ 157 (344)
++.....++..|..|+||||+|+..|+.+++++|+++| ++++.+|. .|.||||+|+ ..++.+++++|+++|++
T Consensus 103 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~g~tpL~~A~-----~~~~~~~v~~Ll~~ga~ 176 (236)
T 1ikn_D 103 TPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLG-ADVNAQEPCNGRTALHLAV-----DLQNPDLVSLLLKCGAD 176 (236)
T ss_dssp TTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTTCCCHHHHHH-----HTTCHHHHHHHHTTTCC
T ss_pred chhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCC
Confidence 65556667888899999999999999999999999998 89999987 8999999999 78889999999999998
Q ss_pred CCCC
Q 043149 158 ERSS 161 (344)
Q Consensus 158 ~~~~ 161 (344)
++..
T Consensus 177 ~~~~ 180 (236)
T 1ikn_D 177 VNRV 180 (236)
T ss_dssp SCCC
T ss_pred CCcc
Confidence 8763
No 17
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=5.1e-25 Score=181.59 Aligned_cols=135 Identities=24% Similarity=0.247 Sum_probs=115.0
Q ss_pred HHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccC
Q 043149 2 VLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVN 81 (344)
Q Consensus 2 v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ 81 (344)
|+.|++.+.+. + .|..|.||||+|+..|+.++++.|++. +.+++..|..|+||||+|+..|+.+++++|+++|.
T Consensus 18 v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--- 91 (153)
T 1awc_B 18 VRILMANGAPF-T-TDWLGTSPLHLAAQYGHFSTTEVLLRA-GVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGA--- 91 (153)
T ss_dssp HHHHHHHTCCC-C-CCTTCCCHHHHHHHHTCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTC---
T ss_pred HHHHHHcCCCC-C-cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCC---
Confidence 67788877753 3 588899999999999999999888865 67788888899999999999999999999998654
Q ss_pred ccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHH
Q 043149 82 MDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMV 151 (344)
Q Consensus 82 ~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L 151 (344)
.++.+|.+|+||||+|+..|+.+++++|+++| ++++.+|..|.||+++|+ ..++.+++++|
T Consensus 92 ---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~-----~~~~~~i~~~L 152 (153)
T 1awc_B 92 ---DVNAKDMLKMTALHWATEHNHQEVVELLIKYG-ADVHTQSKFCKTAFDISI-----DNGNEDLAEIL 152 (153)
T ss_dssp ---CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH-----HTTCHHHHHHH
T ss_pred ---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHH-----HcCCHHHHHHh
Confidence 36778889999999999999999999999998 899999999999999998 77888888876
No 18
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=1.4e-25 Score=197.94 Aligned_cols=148 Identities=16% Similarity=0.236 Sum_probs=133.2
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCC-----CCcccccCCCChHHHHHHHcCCHHHHHHHHh
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACP-----ESILQVTIRKETALHVAAKYDRLEVLETMLG 75 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~-----~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~ 75 (344)
+|+.||+.+.+ ++.+|..|.||||+|+..|+.++++.|+..+. ...+..|..|+||||+|+.+|+.+++++|++
T Consensus 60 ~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 138 (236)
T 1ikn_D 60 IAEALLGAGCD-PELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVS 138 (236)
T ss_dssp HHHCCCSCCCC-SCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 36677777766 88999999999999999999999999998753 2367788999999999999999999999999
Q ss_pred chhccCccccccccCC-CCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHc
Q 043149 76 WLRYVNMDDILNWKND-EGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKA 154 (344)
Q Consensus 76 ~~~~~~~~~~ln~~d~-~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ 154 (344)
+|.+ ++.+|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+||+++|+ ..++.+++++|+++
T Consensus 139 ~g~~------~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~-----~~~~~~~~~~Ll~~ 206 (236)
T 1ikn_D 139 LGAD------VNAQEPCNGRTALHLAVDLQNPDLVSLLLKCG-ADVNRVTYQGYSPYQLTW-----GRPSTRIQQQLGQL 206 (236)
T ss_dssp HTCC------TTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTT-CCSCCCCTTCCCGGGGCT-----TSSCHHHHHHHHTT
T ss_pred cCCC------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcccCCCCCHHHHHH-----ccCchHHHHHHHHc
Confidence 7654 677887 9999999999999999999999999 999999999999999999 88999999999999
Q ss_pred CCCCCCC
Q 043149 155 GGRERSS 161 (344)
Q Consensus 155 ga~~~~~ 161 (344)
|++....
T Consensus 207 ga~~~~~ 213 (236)
T 1ikn_D 207 TLENLQM 213 (236)
T ss_dssp SCGGGSS
T ss_pred chhhhhc
Confidence 9987753
No 19
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.92 E-value=9.3e-25 Score=191.95 Aligned_cols=153 Identities=21% Similarity=0.268 Sum_probs=130.8
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCc----ccccCCCChHHHHHHHcCCHHHHHHHHhc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESI----LQVTIRKETALHVAAKYDRLEVLETMLGW 76 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~----~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~ 76 (344)
+|+.||+..+..++.+|.+|+||||+|+..|+.++++.|++.++... +..|..|+||||+|+..|+.+++++|+++
T Consensus 18 ~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 97 (232)
T 2rfa_A 18 ALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLAR 97 (232)
T ss_dssp HHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhC
Confidence 36788888566699999999999999999999999999998854322 56678999999999999999999999998
Q ss_pred hhccCccc-------cccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHH-
Q 043149 77 LRYVNMDD-------ILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELK- 148 (344)
Q Consensus 77 ~~~~~~~~-------~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~- 148 (344)
|.+.+... ..+..|.+|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+ ..++.+++
T Consensus 98 g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~t~L~~A~-----~~~~~~~~~ 171 (232)
T 2rfa_A 98 GASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG-ADIRAQDSLGNTVLHILI-----LQPNKTFAC 171 (232)
T ss_dssp TCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH-----TCSCHHHHH
T ss_pred CCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHH-----HcCChHHHH
Confidence 76643211 12334568999999999999999999999999 999999999999999999 77777776
Q ss_pred ---HHHHHcCCCCC
Q 043149 149 ---SMVRKAGGRER 159 (344)
Q Consensus 149 ---~~L~~~ga~~~ 159 (344)
++|+++|++..
T Consensus 172 ~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 172 QMYNLLLSYDGGDH 185 (232)
T ss_dssp HHHHHHHHTTCSCS
T ss_pred HHHHHHHhcCCchh
Confidence 99999999875
No 20
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.92 E-value=5.6e-25 Score=188.95 Aligned_cols=143 Identities=20% Similarity=0.306 Sum_probs=132.9
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
+|+.|++.+.+ ++.+|..|.||||+|+..|+.++++.|++..+..++..|..|.||||+|+..|+.+++++|++++.
T Consensus 54 ~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-- 130 (201)
T 3hra_A 54 IAKALIDRGAD-INLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGR-- 130 (201)
T ss_dssp HHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCC--
T ss_pred HHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCC--
Confidence 46788888776 889999999999999999999999999988888999999999999999999999999999999652
Q ss_pred CccccccccCCCCCcHHHHHHHCCc-----HHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcC
Q 043149 81 NMDDILNWKNDEGNTLLHISISRSH-----IQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAG 155 (344)
Q Consensus 81 ~~~~~ln~~d~~G~TpLH~Aa~~g~-----~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~g 155 (344)
..++.+|..|+||||+|+..++ .+++++|+++| ++++.+|..|+||+|+|+ ..++.+++++|+++|
T Consensus 131 ---~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~-----~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 131 ---EDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENG-ADQSIKDNSGRTAMDYAN-----QKGYTEISKILAQYN 201 (201)
T ss_dssp ---CCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH-----HHTCHHHHHHHHTCC
T ss_pred ---CCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCC-CCCCccCCCCCCHHHHHH-----HcCCHhHHHHHHhcC
Confidence 3478899999999999999998 99999999999 999999999999999999 889999999999886
No 21
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.92 E-value=9.4e-25 Score=191.63 Aligned_cols=147 Identities=18% Similarity=0.185 Sum_probs=114.0
Q ss_pred HHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccC
Q 043149 2 VLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVN 81 (344)
Q Consensus 2 v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ 81 (344)
++.+++.++...+.+|.+|.||||+|+..|+.++++.|++. +..++..|..|+||||+|+..|+.+++++|++++.+
T Consensus 22 v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-- 98 (231)
T 3aji_A 22 LKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQL-GVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAH-- 98 (231)
T ss_dssp HHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC--
T ss_pred HHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHh-CCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCC--
Confidence 56788888877888888888888888888888888888776 667788888888888888888888888888886543
Q ss_pred ccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCCC
Q 043149 82 MDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERSS 161 (344)
Q Consensus 82 ~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~~ 161 (344)
++.+|..|.||||+|+..|+.+++++|++++ ++++.+|..|.||+|+|+ ..++.+++++|+++|++++..
T Consensus 99 ----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~ 168 (231)
T 3aji_A 99 ----VNAVNQNGCTPLHYAASKNRHEIAVMLLEGG-ANPDAKDHYDATAMHRAA-----AKGNLKMVHILLFYKASTNIQ 168 (231)
T ss_dssp ----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH-----HHTCHHHHHHHHHTTCCSCCC
T ss_pred ----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHH-----HcCCHHHHHHHHhcCCCcccc
Confidence 5556777777777777777777777777776 777777777777777777 666777777777777766653
No 22
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.92 E-value=9.9e-25 Score=190.47 Aligned_cols=149 Identities=15% Similarity=0.181 Sum_probs=137.3
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
+|+.|++.+.+ ++.+|..|.||||+|+..|+.++++.|++..+..++..+..|+||||+|+..|+.+++++|++++.
T Consensus 40 ~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-- 116 (223)
T 2f8y_A 40 AAKRLLEASAD-ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHA-- 116 (223)
T ss_dssp HHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC--
T ss_pred HHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCC--
Confidence 46788888776 889999999999999999999999999998777889999999999999999999999999999654
Q ss_pred CccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 81 NMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 81 ~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
.++.+|.+|+||||+|+..|+.+++++|++++ ++++.+|..|.||+|+|+ ..++.+++++|+++|++++.
T Consensus 117 ----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~ga~~~~ 186 (223)
T 2f8y_A 117 ----DVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG-ANKDMQNNREETPLFLAA-----REGSYETAKVLLDHFANRDI 186 (223)
T ss_dssp ----CTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHH-----HHTCHHHHHHHHHTTCCTTC
T ss_pred ----CCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCcCHHHHHH-----HcCCHHHHHHHHHcCCCCcc
Confidence 36778999999999999999999999999998 999999999999999999 88899999999999999876
Q ss_pred CC
Q 043149 161 SL 162 (344)
Q Consensus 161 ~~ 162 (344)
..
T Consensus 187 ~~ 188 (223)
T 2f8y_A 187 TD 188 (223)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 23
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.92 E-value=1.2e-24 Score=201.90 Aligned_cols=152 Identities=22% Similarity=0.264 Sum_probs=120.4
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
+|+.|++.+.+ ++.+|.+|.||||+|+..|+.++++.|++. +..++..|..|+||||+|+..|+.+++++|+++|.++
T Consensus 73 ~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 150 (351)
T 3utm_A 73 IVQLLLQHGAD-VHAKDKGGLVPLHNACSYGHYEVTELLLKH-GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADP 150 (351)
T ss_dssp HHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHcCCC-CCccCCCCCcHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 36777777666 788888888888888888888888877776 6777888888888888888888888888888876543
Q ss_pred C-------------------------------------------------------------------------------
Q 043149 81 N------------------------------------------------------------------------------- 81 (344)
Q Consensus 81 ~------------------------------------------------------------------------------- 81 (344)
.
T Consensus 151 ~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~ 230 (351)
T 3utm_A 151 TLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVA 230 (351)
T ss_dssp TCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHH
T ss_pred ccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHH
Confidence 2
Q ss_pred -----ccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCC
Q 043149 82 -----MDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGG 156 (344)
Q Consensus 82 -----~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga 156 (344)
.+..++.+|.+|+||||+|+..|+.+++++|+++| +++|.+|..|+||||+|+ ..++.+++++|+++|+
T Consensus 231 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~n~~d~~g~t~L~~A~-----~~~~~~~v~~Ll~~ga 304 (351)
T 3utm_A 231 ELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHG-AKMNALDSLGQTALHRAA-----LAGHLQTCRLLLSYGS 304 (351)
T ss_dssp HHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH-----HHTCHHHHHHHHHTTC
T ss_pred HHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHH-----HcCcHHHHHHHHHcCC
Confidence 12235667778888888888888888888888887 888888888888888888 7777888888888888
Q ss_pred CCCC
Q 043149 157 RERS 160 (344)
Q Consensus 157 ~~~~ 160 (344)
+++.
T Consensus 305 d~~~ 308 (351)
T 3utm_A 305 DPSI 308 (351)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 7766
No 24
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=1.6e-24 Score=171.53 Aligned_cols=126 Identities=26% Similarity=0.435 Sum_probs=118.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCCCcHHH
Q 043149 19 EGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEGNTLLH 98 (344)
Q Consensus 19 ~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~TpLH 98 (344)
+|.||||.|+..|+.++++.|++. +..++..|..|.||||+|+..++.+++++|++++. .++.+|..|+||||
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~------~~~~~~~~g~t~l~ 73 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA------DVNAKDKNGRTPLH 73 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC------CTTCCCTTSCCHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCC------CCcccCCCCCcHHH
Confidence 599999999999999999999987 67788899999999999999999999999999654 36778999999999
Q ss_pred HHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCC
Q 043149 99 ISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGR 157 (344)
Q Consensus 99 ~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~ 157 (344)
+|+..|+.+++++|++++ ++++.+|..|.||+++|+ ..++.+++++|+++|++
T Consensus 74 ~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~-----~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 74 LAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAA-----RNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHHHTCC
T ss_pred HHHHcChHHHHHHHHHcC-CCCcccCCCCCCHHHHHH-----HcCcHHHHHHHHHcCCC
Confidence 999999999999999999 999999999999999999 88899999999999985
No 25
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.92 E-value=8e-25 Score=180.65 Aligned_cols=138 Identities=17% Similarity=0.245 Sum_probs=123.1
Q ss_pred HHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccC
Q 043149 2 VLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVN 81 (344)
Q Consensus 2 v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ 81 (344)
++.||+..+..++..|..|.||||+ |..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|+++|.+
T Consensus 18 v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-- 93 (156)
T 1bd8_A 18 VRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQ-GASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGAD-- 93 (156)
T ss_dssp HHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC--
T ss_pred HHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC--
Confidence 6778887555688899999999999 999999999888876 778889999999999999999999999999996543
Q ss_pred ccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHc
Q 043149 82 MDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKA 154 (344)
Q Consensus 82 ~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ 154 (344)
++.+|.+|+||||+|+..|+.+++++|++. ++++.+|.+|.||+|+|+ ..++.+++++|+++
T Consensus 94 ----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~g~t~l~~A~-----~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 94 ----VNVPDGTGALPIHLAVQEGHTAVVSFLAAE--SDLHRRDARGLTPLELAL-----QRGAQDLVDILQGH 155 (156)
T ss_dssp ----SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT--SCTTCCCTTSCCHHHHHH-----HSCCHHHHHHHHTT
T ss_pred ----CCCcCCCCCcHHHHHHHhChHHHHHHHHhc--cCCCCcCCCCCCHHHHHH-----HcCcHHHHHHHHhh
Confidence 677899999999999999999999999988 789999999999999999 88899999998864
No 26
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.92 E-value=1.2e-24 Score=195.41 Aligned_cols=145 Identities=17% Similarity=0.173 Sum_probs=118.7
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
+|+.|++.+.+ ++.+|.+|.||||+|+..|+.++++.|++. +.+++..|..|+||||+|+..|+.+++++|++++.+.
T Consensus 18 ~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 95 (261)
T 2xai_A 18 SLRNLISQGWA-VNIITADHVSPLHEACLGGHLSCVKILLKH-GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASV 95 (261)
T ss_dssp HHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred HHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 36788887766 889999999999999999999999888886 7888899999999999999999999999999977653
Q ss_pred CccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 81 NMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 81 ~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
+ .+.+|.||||+|+..|+.+++++|++++ ++++.+|..|.||||+|+ ..++.+++++|+++|++++.
T Consensus 96 ~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~ 162 (261)
T 2xai_A 96 Q-------PESDLASPIHEAARRGHVECVNSLIAYG-GNIDHKISHLGTPLYLAC-----ENQQRACVKKLLESGADVNQ 162 (261)
T ss_dssp S-------CSCTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCBTTTBCHHHHHH-----HTTCHHHHHHHHHHTCCTTC
T ss_pred C-------CCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCcCCCCCCCHHHHHH-----HhCCHHHHHHHHHcCCCCCC
Confidence 2 2445777777777777777777777777 777777777777777777 66777777777777777765
No 27
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.92 E-value=1.1e-24 Score=196.36 Aligned_cols=97 Identities=18% Similarity=0.111 Sum_probs=52.2
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHhCCC--CcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCC
Q 043149 14 RVQGREGVTPLHYVAEKGNVDLLCKFLAACPE--SILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKND 91 (344)
Q Consensus 14 ~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~--~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~ 91 (344)
+.+|.+|+||||+||..|+.++++.|++.+.. .++.+|..|+||||+|+..|+.+++++|+++|.+ ++.+|.
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------~~~~~~ 76 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG------VLVAER 76 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------SSCCCT
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCCCCC
Confidence 44555555555555555555555555544221 1445555555555555555555555555554322 444555
Q ss_pred CCCcHHHHHHHCCcHHHHHHHHhcc
Q 043149 92 EGNTLLHISISRSHIQIVRLIVKRV 116 (344)
Q Consensus 92 ~G~TpLH~Aa~~g~~~~v~~Ll~~~ 116 (344)
.|+||||+|+..|+.+++++|++++
T Consensus 77 ~g~tpL~~A~~~~~~~~v~~Ll~~~ 101 (282)
T 1oy3_D 77 GGHTALHLACRVRAHTCACVLLQPR 101 (282)
T ss_dssp TSCCHHHHHTTTTCHHHHHHHSSSC
T ss_pred CCCCHHHHHHHcCCcchhHhhhccC
Confidence 5555555555555555555555543
No 28
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.92 E-value=7.1e-25 Score=187.50 Aligned_cols=141 Identities=18% Similarity=0.163 Sum_probs=130.4
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
+++.|++.+.+ ++.+|..|.||||+|+..|+.++++.|++. +.+++..|..|+||||+|+..|+.+++++|++++.
T Consensus 50 ~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-- 125 (192)
T 2rfm_A 50 AIDKLVENFDK-LEDKDIEGSTALIWAVKNNRLGIAEKLLSK-GSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGA-- 125 (192)
T ss_dssp GHHHHHHHHCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC--
T ss_pred HHHHHHHhccc-cccccccCccHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC--
Confidence 46788888776 888999999999999999999999999987 67788999999999999999999999999999654
Q ss_pred CccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcC
Q 043149 81 NMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAG 155 (344)
Q Consensus 81 ~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~g 155 (344)
.++.+|.+|+||||+|+..|+.+++++|++++ ++++.+|..|.||+++|+ ..++.+++++|+++|
T Consensus 126 ----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~-----~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 126 ----NVNDRNLEGETPLIVASKYGRSEIVKKLLELG-ADISARDLTGLTAEASAR-----IFGRQEVIKIFTEVR 190 (192)
T ss_dssp ----CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHH-----HTTCHHHHHHHHHHH
T ss_pred ----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHH-----HhCcHHHHHHHHhcc
Confidence 47789999999999999999999999999999 999999999999999999 889999999999864
No 29
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=1e-24 Score=176.46 Aligned_cols=128 Identities=23% Similarity=0.226 Sum_probs=116.7
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCCC
Q 043149 15 VQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEGN 94 (344)
Q Consensus 15 ~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~ 94 (344)
.....|.||||+||..|+.++++.|++. +.+++..|..|+||||+|+.+|+.+++++|++++. .++.+|.+|+
T Consensus 9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~d~~g~ 81 (136)
T 2jab_A 9 HHGSDLGKKLLEAARAGQDDEVRILMAN-GADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGA------DVNAVDAIGF 81 (136)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC------CTTCCCTTCC
T ss_pred cccccccHHHHHHHHhCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCCcCCCCCC
Confidence 3556799999999999999999999887 77889999999999999999999999999999654 4778999999
Q ss_pred cHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcC
Q 043149 95 TLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAG 155 (344)
Q Consensus 95 TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~g 155 (344)
||||+|+..|+.+++++|++++ ++++.+|..|+||+|+|+ ..++.+++++|++.|
T Consensus 82 t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~tpl~~A~-----~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 82 TPLHLAAFIGHLEIAEVLLKHG-ADVNAQDKFGKTAFDISI-----GNGNEDLAEILQKLN 136 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHHC-
T ss_pred CHHHHHHHcCCHHHHHHHHHcC-CCCcCcCCCCCCHHHHHH-----HCCCHHHHHHHHHcC
Confidence 9999999999999999999999 999999999999999999 888999999999876
No 30
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.92 E-value=2.6e-24 Score=181.25 Aligned_cols=127 Identities=23% Similarity=0.317 Sum_probs=119.5
Q ss_pred cHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCCCcHHHHHH
Q 043149 22 TPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEGNTLLHISI 101 (344)
Q Consensus 22 TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~TpLH~Aa 101 (344)
++|+.||+.|+.++|+.||+. +.+++.+|.+|+||||+|+..++.+++++|++.|. .++.+|.+|+||||+|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~-Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~ga------d~~~~d~~g~TpLh~A~ 78 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIEN-GADVNASDSDGRTPLHHAAENGHKEVVKLLISKGA------DVNAKDSDGRTPLHHAA 78 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhccc------chhhhccCCCCHHHHHH
Confidence 479999999999999999986 78899999999999999999999999999999654 47889999999999999
Q ss_pred HCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCCC
Q 043149 102 SRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERSS 161 (344)
Q Consensus 102 ~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~~ 161 (344)
..|+.+++++|+++| +++|.+|.+|+||||+|+ ..++.+++++|+++|++++..
T Consensus 79 ~~g~~~~v~~Ll~~g-advn~~d~~G~TpLh~A~-----~~g~~~~v~~Ll~~gad~~~~ 132 (169)
T 4gpm_A 79 ENGHKEVVKLLISKG-ADVNAKDSDGRTPLHHAA-----ENGHKEVVKLLISKGADVNTS 132 (169)
T ss_dssp HTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCC
T ss_pred HcCCHHHHHHHHHCc-CCCCCCCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCcccc
Confidence 999999999999999 999999999999999999 889999999999999998873
No 31
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.92 E-value=2.7e-24 Score=188.18 Aligned_cols=149 Identities=15% Similarity=0.220 Sum_probs=113.7
Q ss_pred HHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCC-CCccc-ccCCCChHHHHHHHcCCHHHHHHHHhchhc
Q 043149 2 VLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACP-ESILQ-VTIRKETALHVAAKYDRLEVLETMLGWLRY 79 (344)
Q Consensus 2 v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~-~~~~~-~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~ 79 (344)
|+.|++.+++..+.+|.+|.||||+|+..|+.++++.|++.+. ..++. .|..|+||||+|+..|+.+++++|++++..
T Consensus 18 v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 97 (228)
T 2dzn_A 18 VQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLK 97 (228)
T ss_dssp HHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSC
T ss_pred HHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC
Confidence 6778888888777788888888888888888888888887741 33444 778888888888888888888888886521
Q ss_pred cCccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcC-CCC
Q 043149 80 VNMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAG-GRE 158 (344)
Q Consensus 80 ~~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~g-a~~ 158 (344)
..++.+|.+|.||||+|+..|+.+++++|++++ ++++.+|..|.||||+|+ ..++.+++++|++.| +++
T Consensus 98 ----~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~ 167 (228)
T 2dzn_A 98 ----PDLNKITNQGVTCLHLAVGKKWFEVSQFLIENG-ASVRIKDKFNQIPLHRAA-----SVGSLKLIELLCGLGKSAV 167 (228)
T ss_dssp ----CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHH-----HTTCHHHHHHHHTTTCCCS
T ss_pred ----cccccCCcCCCCHHHHHHHcCCHhHHHHHHHcC-CCccccCCCCCCHHHHHH-----HcCCHHHHHHHHhcCcccc
Confidence 335667777777777777777777777777777 777777777777777777 666777777777777 665
Q ss_pred CC
Q 043149 159 RS 160 (344)
Q Consensus 159 ~~ 160 (344)
+.
T Consensus 168 ~~ 169 (228)
T 2dzn_A 168 NW 169 (228)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 32
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.91 E-value=3.1e-24 Score=189.01 Aligned_cols=146 Identities=20% Similarity=0.258 Sum_probs=95.7
Q ss_pred HHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccC
Q 043149 2 VLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVN 81 (344)
Q Consensus 2 v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ 81 (344)
++.|++.+.+ ++..|.+|.||||+|+..|+.++++.|++. +..++..|..|.||||+|+..|+.+++++|++.+.
T Consensus 27 v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~--- 101 (237)
T 3b7b_A 27 CHMLVQAGAN-IDTCSEDQRTPLMEAAENNHLEAVKYLIKA-GALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQ--- 101 (237)
T ss_dssp HHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTC---
T ss_pred HHHHHHcCCC-cCccCCCCCCHHHHHHHhCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC---
Confidence 5566666555 666777777777777777777777666654 55666667777777777777777777777776531
Q ss_pred ccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 82 MDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 82 ~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
..++..|..|.||||+|+..|+.+++++|++++ ++++.+|..|.||+|+|+ ..++.+++++|++.|++++.
T Consensus 102 --~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~-----~~~~~~~~~~Ll~~g~~~~~ 172 (237)
T 3b7b_A 102 --MDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKG-SDINIRDNEENICLHWAA-----FSGCVDIAEILLAAKCDLHA 172 (237)
T ss_dssp --CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH-----HHCCHHHHHHHHTTTCCTTC
T ss_pred --CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCccCCCCCCHHHHHH-----HCCCHHHHHHHHHcCCCCCC
Confidence 234555666666666666666666666666666 666666666666666666 55566666666666666554
No 33
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.91 E-value=1.7e-24 Score=193.49 Aligned_cols=147 Identities=16% Similarity=0.189 Sum_probs=137.4
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
+|+.|++.+.+ ++.+|..|.||||+|+..|+.++++.|++.++..++..|..|+||||+|+..|+.+++++|+++|.
T Consensus 72 ~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-- 148 (253)
T 1yyh_A 72 AAKRLLEASAD-ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHA-- 148 (253)
T ss_dssp HHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTC--
T ss_pred HHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCC--
Confidence 46788888776 889999999999999999999999999998777889999999999999999999999999999654
Q ss_pred CccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 81 NMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 81 ~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
.++.+|.+|+||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+ ..++.+++++|+++|++++.
T Consensus 149 ----~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpL~~A~-----~~~~~~~v~~Ll~~ga~~~~ 218 (253)
T 1yyh_A 149 ----DVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG-ANKDMQNNREETPLFLAA-----REGSYETAKVLLDHFANRDI 218 (253)
T ss_dssp ----CTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH-----HHTCHHHHHHHHHTTCCTTC
T ss_pred ----CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHH-----HCCCHHHHHHHHHcCCCccc
Confidence 47789999999999999999999999999999 999999999999999999 88999999999999999876
No 34
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.91 E-value=8.6e-25 Score=176.85 Aligned_cols=130 Identities=22% Similarity=0.225 Sum_probs=115.7
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCCC
Q 043149 15 VQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEGN 94 (344)
Q Consensus 15 ~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~ 94 (344)
.+|.+|.||||+|+..|+.++++.|++. +..++.+|..|+||||+|+..|+.+++++|++++. .++.+|..|+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~------~~~~~~~~g~ 77 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQN-GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKA------LVNTTGYQND 77 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCGGGC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC------cccCcCCCCC
Confidence 6789999999999999999999998886 77889999999999999999999999999999654 4778999999
Q ss_pred cHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCC
Q 043149 95 TLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGR 157 (344)
Q Consensus 95 TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~ 157 (344)
||||+|+..|+.+++++|++++ ++++.+|..|.||+++|+ ..+..+++++|.+.+..
T Consensus 78 t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~-----~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 78 SPLHDAAKNGHVDIVKLLLSYG-ASRNAVNIFGLRPVDYTD-----DESMKSLLLLPEKNESS 134 (137)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCGGGGCC-----CHHHHHHHSCC------
T ss_pred CHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHh-----hccHHHHHhhccccccC
Confidence 9999999999999999999998 999999999999999999 88888888877766443
No 35
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.91 E-value=7.2e-24 Score=193.02 Aligned_cols=145 Identities=17% Similarity=0.173 Sum_probs=124.1
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
+|+.||+.+.+ ++.+|.+|.||||+|+..|+.++++.|++. +..++.+|..|+||||+|+..|+.+++++|++++.+.
T Consensus 74 ~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 151 (285)
T 3d9h_A 74 SLRNLISQGWA-VNIITADHVSPLHEACLGGHLSCVKILLKH-GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASV 151 (285)
T ss_dssp HHHHHHHTTCC-SCEECTTCCCHHHHHHHTTCHHHHHHHHHT-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred HHHHHHHCCCC-CCCcCCCCCCHHHHHHHCCcHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCC
Confidence 36778887766 888999999999999999999999888876 7788889999999999999999999999999976553
Q ss_pred CccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 81 NMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 81 ~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
+ .+.+|.||||+|+..|+.+++++|++++ ++++.+|..|.||||+|+ ..++.+++++|++.|++++.
T Consensus 152 ------~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~-----~~~~~~~v~~Ll~~ga~~~~ 218 (285)
T 3d9h_A 152 ------Q-PESDLASPIHEAARRGHVECVNSLIAYG-GNIDHKISHLGTPLYLAC-----ENQQRACVKKLLESGADVNQ 218 (285)
T ss_dssp ------S-CSCTTSCHHHHHHHHTCHHHHHHHHHTT-CCTTCCBTTTBCHHHHHH-----HTTCHHHHHHHHHTTCCTTC
T ss_pred ------C-CCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHH-----HcCcHHHHHHHHHCCCCCCC
Confidence 2 2345888888888888888888888888 888888888888888888 77888888888888888774
No 36
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.91 E-value=3.3e-24 Score=178.74 Aligned_cols=135 Identities=22% Similarity=0.248 Sum_probs=124.2
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCCC
Q 043149 15 VQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEGN 94 (344)
Q Consensus 15 ~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~ 94 (344)
..|.+|.||||.|+..|+.++++.|++..+...+..+..|+||||+|+.+|+.+++++|++++. .++.+|.+|+
T Consensus 3 ~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~g~ 76 (165)
T 3twr_A 3 MGNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGA------DVHAKDKGGL 76 (165)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSC
T ss_pred CCcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCC------CCCccCCCCC
Confidence 3578899999999999999999999998888888889999999999999999999999999654 3778999999
Q ss_pred cHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCCC
Q 043149 95 TLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERSS 161 (344)
Q Consensus 95 TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~~ 161 (344)
||||+|+..|+.+++++|++++ ++++.+|..|+||||+|+ ..++.+++++|+++|++++..
T Consensus 77 t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~ga~~~~~ 137 (165)
T 3twr_A 77 VPLHNACSYGHYEVAELLVKHG-AVVNVADLWKFTPLHEAA-----AKGKYEICKLLLQHGADPTKK 137 (165)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCC
T ss_pred CHHHHHHHcCcHHHHHHHHhCC-CCCCCcCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCCccc
Confidence 9999999999999999999999 999999999999999999 888999999999999998763
No 37
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.91 E-value=5.8e-25 Score=182.08 Aligned_cols=134 Identities=14% Similarity=0.139 Sum_probs=117.0
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCC
Q 043149 13 VRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDE 92 (344)
Q Consensus 13 ~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~ 92 (344)
....+..|.||||+|+..|+.++++.|++. +..++..|..|+||||+|+ .|+.+++++|+++|. .++.+|..
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~------~~~~~d~~ 76 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEA-GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGA------EPNCADPA 76 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTT-TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTC------CCCCCCTT
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCC------CCCCcCCC
Confidence 455688999999999999999999999976 7789999999999999985 999999999999654 47889999
Q ss_pred CCc-HHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 93 GNT-LLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 93 G~T-pLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
|+| |||+|+..|+.+++++|++++ ++++.+|..|+||||+|+ ..++.+++++|+++|++++.
T Consensus 77 g~ttpL~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~-----~~~~~~~v~~Ll~~ga~~~~ 139 (156)
T 1bi7_B 77 TLTRPVHDAAREGFLDTLVVLHRAG-ARLDVRDAWGRLPVDLAE-----ELGHRDVARYLRAAAGGTRG 139 (156)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHHT-CCSSCCCTTCCCHHHHHH-----HHTCHHHHHHHSSCC-----
T ss_pred CCcHHHHHHHHCCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHH-----HhCHHHHHHHHHHcCCCCCc
Confidence 999 999999999999999999999 999999999999999999 88899999999999999877
No 38
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.91 E-value=6.5e-24 Score=187.11 Aligned_cols=150 Identities=18% Similarity=0.202 Sum_probs=98.9
Q ss_pred HHHHHh---cCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchh
Q 043149 2 VLRLID---FDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLR 78 (344)
Q Consensus 2 v~~LL~---~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~ 78 (344)
|+.|++ ..+..++.+|..|.||||+|+..|+.++++.|++. +..++..|..|+||||+|+..|+.+++++|++.+.
T Consensus 25 v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~ 103 (241)
T 1k1a_A 25 VHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA-GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAA 103 (241)
T ss_dssp HHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSC
T ss_pred HHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 445554 34445777778888888888888888888777765 56677777778888888888888888888877654
Q ss_pred ccCccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCccccccc-CCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCC
Q 043149 79 YVNMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARN-SKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGR 157 (344)
Q Consensus 79 ~~~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n-~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~ 157 (344)
. ....++..|..|+||||+|+..|+.+++++|++++ ++++..+ ..|.||||+|+ ..++.+++++|+++|++
T Consensus 104 ~--~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~ 175 (241)
T 1k1a_A 104 P--GTLDLEARNYDGLTALHVAVNTECQETVQLLLERG-ADIDAVDIKSGRSPLIHAV-----ENNSLSMVQLLLQHGAN 175 (241)
T ss_dssp T--TSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTTCCCHHHHHH-----HTTCHHHHHHHHHTTCC
T ss_pred C--ccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcC-CCcccccccCCCcHHHHHH-----HcCCHHHHHHHHHcCCC
Confidence 2 11234555666666666666666666666666665 6666555 55666666666 55556666666666666
Q ss_pred CCC
Q 043149 158 ERS 160 (344)
Q Consensus 158 ~~~ 160 (344)
++.
T Consensus 176 ~~~ 178 (241)
T 1k1a_A 176 VNA 178 (241)
T ss_dssp TTC
T ss_pred CCC
Confidence 554
No 39
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.91 E-value=3.4e-24 Score=188.02 Aligned_cols=148 Identities=20% Similarity=0.231 Sum_probs=135.9
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
+|+.|++.+.+ ++.+|..|.||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++++.+
T Consensus 55 ~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~- 131 (231)
T 3aji_A 55 IVEFLLQLGVP-VNDKDDAGWSPLHIAASAGXDEIVKALLVK-GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGAN- 131 (231)
T ss_dssp HHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-
T ss_pred HHHHHHHhCCC-CCCcCCCCCCHHHHHHHcCHHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-
Confidence 46788888766 889999999999999999999999888886 778889999999999999999999999999996543
Q ss_pred CccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 81 NMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 81 ~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
++.+|..|.||||+|+..|+.+++++|++++ ++++.+|..|.||||+|+ ..++.+++++|+++|++++.
T Consensus 132 -----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~ga~~~~ 200 (231)
T 3aji_A 132 -----PDAKDHYDATAMHRAAAKGNLKMVHILLFYK-ASTNIQDTEGNTPLHLAC-----DEERVEEAKFLVTQGASIYI 200 (231)
T ss_dssp -----TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHH-----HTTCHHHHHHHHHTTCCSCC
T ss_pred -----CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcC-CCccccCCCCCCHHHHHH-----HCCCHHHHHHHHHCCCCCCC
Confidence 6778999999999999999999999999999 999999999999999999 88899999999999999876
Q ss_pred CC
Q 043149 161 SL 162 (344)
Q Consensus 161 ~~ 162 (344)
..
T Consensus 201 ~~ 202 (231)
T 3aji_A 201 EN 202 (231)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 40
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.91 E-value=2.6e-24 Score=189.06 Aligned_cols=147 Identities=20% Similarity=0.173 Sum_probs=128.5
Q ss_pred CHHHHHhcCCccc----cccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccC-------------CCChHHHHHHH
Q 043149 1 MVLRLIDFDRNLV----RVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTI-------------RKETALHVAAK 63 (344)
Q Consensus 1 ~v~~LL~~~~~~~----~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~-------------~G~t~Lh~A~~ 63 (344)
+|+.|++.+++.. +..|.+|.||||+|+..|+.++++.|++. +.+++..+. .|+||||+|+.
T Consensus 52 ~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 130 (232)
T 2rfa_A 52 AAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLAR-GASVSARATGSVFHYRPHNLIYYGEHPLSFAAC 130 (232)
T ss_dssp HHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHH
T ss_pred HHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhC-CCCCCcccCCcceeecccccccCCCCHHHHHHH
Confidence 4678888887743 56778999999999999999999998887 666666654 79999999999
Q ss_pred cCCHHHHHHHHhchhccCccccccccCCCCCcHHHHHHHCCcHHHH----HHHHhccCccc------ccccCCCCCHHHH
Q 043149 64 YDRLEVLETMLGWLRYVNMDDILNWKNDEGNTLLHISISRSHIQIV----RLIVKRVRDQI------NARNSKDNTAMDM 133 (344)
Q Consensus 64 ~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v----~~Ll~~~~~~~------~~~n~~G~Tpl~~ 133 (344)
.|+.+++++|+++|.+ ++.+|.+|+||||+|+..|+.+++ ++|++.+ ++. +.+|..|+||+|+
T Consensus 131 ~~~~~~v~~Ll~~ga~------~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g-~~~~~~~~~~~~~~~g~tpl~~ 203 (232)
T 2rfa_A 131 VGSEEIVRLLIEHGAD------IRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYD-GGDHLKSLELVPNNQGLTPFKL 203 (232)
T ss_dssp HTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTT-CSCSSCCGGGCCCTTSCCHHHH
T ss_pred cCCHHHHHHHHHCCCC------CCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcC-CchhhhhhhccCCCCCCCHHHH
Confidence 9999999999996544 788999999999999999999988 9999998 766 6899999999999
Q ss_pred HhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 134 VKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 134 a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
|+ ..++.+++++|+++|+....
T Consensus 204 A~-----~~g~~~~v~~Ll~~g~~~~~ 225 (232)
T 2rfa_A 204 AG-----VEGNIVMFQHLMQKRKHIAA 225 (232)
T ss_dssp HH-----HHTCHHHHHHHHHHHHHC--
T ss_pred HH-----HcCCHHHHHHHHhcCccchh
Confidence 99 88999999999999877655
No 41
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.91 E-value=8.9e-24 Score=184.84 Aligned_cols=149 Identities=17% Similarity=0.178 Sum_probs=127.2
Q ss_pred CHHHHHhcC--CccccccCCCCCcHHHHHHHcCCHHHHHHHHHhC-CCCcccccCCCChHHHHHHHcCCHHHHHHHHhch
Q 043149 1 MVLRLIDFD--RNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAAC-PESILQVTIRKETALHVAAKYDRLEVLETMLGWL 77 (344)
Q Consensus 1 ~v~~LL~~~--~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~-~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~ 77 (344)
+++.|++.+ .+.....|..|.||||+|+..|+.++++.|++.+ +..++..|..|+||||+|+..|+.+++++|+++|
T Consensus 51 ~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 130 (228)
T 2dzn_A 51 ITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENG 130 (228)
T ss_dssp HHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcC
Confidence 367788877 5533338889999999999999999998888763 2677888889999999999999999999999865
Q ss_pred hccCccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHH-HcCC
Q 043149 78 RYVNMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVR-KAGG 156 (344)
Q Consensus 78 ~~~~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~-~~ga 156 (344)
. .++.+|..|+||||+|+..|+.+++++|++.++++++.+|..|+||||+|+ ..++.+++++|+ +.|+
T Consensus 131 ~------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~-----~~~~~~~v~~Ll~~~ga 199 (228)
T 2dzn_A 131 A------SVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHAL-----AEGHGDAAVLLVEKYGA 199 (228)
T ss_dssp C------CSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHH-----HTTCHHHHHHHHHHHCC
T ss_pred C------CccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHH-----HcCCHHHHHHHHHhcCC
Confidence 4 367788999999999999999999999999887889999999999999999 788899999999 8899
Q ss_pred CCCC
Q 043149 157 RERS 160 (344)
Q Consensus 157 ~~~~ 160 (344)
+++.
T Consensus 200 ~~~~ 203 (228)
T 2dzn_A 200 EYDL 203 (228)
T ss_dssp CSCC
T ss_pred CCCc
Confidence 8876
No 42
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.91 E-value=2e-24 Score=192.89 Aligned_cols=147 Identities=16% Similarity=0.165 Sum_probs=128.2
Q ss_pred CHHHHHhcCCcccc----------ccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCC-------------CChH
Q 043149 1 MVLRLIDFDRNLVR----------VQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIR-------------KETA 57 (344)
Q Consensus 1 ~v~~LL~~~~~~~~----------~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~-------------G~t~ 57 (344)
+|+.||+.+.+.-. .+|..|.||||+|+..|+.++++.|++. +.+++..|.. |+||
T Consensus 61 ~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~g~tp 139 (256)
T 2etb_A 61 CIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVEN-GADVHLRACGRFFQKHQGTCFYFGELP 139 (256)
T ss_dssp THHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCCSGGGSCCSSSCCCSCSSH
T ss_pred HHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcccccccccccccccccCCCCH
Confidence 57788887665221 2357899999999999999999988887 7778888876 9999
Q ss_pred HHHHHHcCCHHHHHHHHh---chhccCccccccccCCCCCcHHHHHHH--CCcHH-------HHHHHHhccCccc-----
Q 043149 58 LHVAAKYDRLEVLETMLG---WLRYVNMDDILNWKNDEGNTLLHISIS--RSHIQ-------IVRLIVKRVRDQI----- 120 (344)
Q Consensus 58 Lh~A~~~g~~~iv~~Ll~---~~~~~~~~~~ln~~d~~G~TpLH~Aa~--~g~~~-------~v~~Ll~~~~~~~----- 120 (344)
||+|+..|+.+++++|++ .|. .+|.+|.+|+||||+|+. .++.+ ++++|+++| +++
T Consensus 140 L~~A~~~~~~~~v~~Ll~~~~~ga------~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~g-a~~~~~~~ 212 (256)
T 2etb_A 140 LSLAACTKQWDVVTYLLENPHQPA------SLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMG-ARLCPTVQ 212 (256)
T ss_dssp HHHHHHTTCHHHHHHHHHCSSCCC------CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-HHHSTTCC
T ss_pred HHHHHHcCCHHHHHHHHhccccCC------CcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcC-CCcccccc
Confidence 999999999999999999 554 478899999999999999 88888 999999999 999
Q ss_pred --ccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 121 --NARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 121 --~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
+.+|..|+||||+|+ ..++.+++++|+++|++...
T Consensus 213 ~~~~~d~~g~tpL~~A~-----~~g~~~~v~~Ll~~g~~~~~ 249 (256)
T 2etb_A 213 LEEISNHQGLTPLKLAA-----KEGKIEIFRHILQREFSGAA 249 (256)
T ss_dssp GGGCCCTTSCCHHHHHH-----HTTCHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCCCHHHHHH-----HhCCHHHHHHHHhCCCCCCC
Confidence 999999999999999 88999999999998776543
No 43
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.91 E-value=1.6e-24 Score=195.60 Aligned_cols=147 Identities=18% Similarity=0.197 Sum_probs=125.5
Q ss_pred CHHHHHhcCCcc------cc----ccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccC--------------CCCh
Q 043149 1 MVLRLIDFDRNL------VR----VQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTI--------------RKET 56 (344)
Q Consensus 1 ~v~~LL~~~~~~------~~----~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~--------------~G~t 56 (344)
+|+.||+.+.+. ++ .+|..|.||||+|+..|+.++++.|++. +.+++..+. .|+|
T Consensus 72 ~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~~g~t 150 (273)
T 2pnn_A 72 TIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVEN-GADVQAAANGDFFKKTKGRPGFYFGEL 150 (273)
T ss_dssp HHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBCSGGGSSCSSSCCCCSCBS
T ss_pred HHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcCccccccccccccccccccCCCC
Confidence 366777765431 22 2667999999999999999999988887 777888886 7999
Q ss_pred HHHHHHHcCCHHHHHHHHh---chhccCccccccccCCCCCcHHHHHHHCCc---------HHHHHHHHhccCcccc---
Q 043149 57 ALHVAAKYDRLEVLETMLG---WLRYVNMDDILNWKNDEGNTLLHISISRSH---------IQIVRLIVKRVRDQIN--- 121 (344)
Q Consensus 57 ~Lh~A~~~g~~~iv~~Ll~---~~~~~~~~~~ln~~d~~G~TpLH~Aa~~g~---------~~~v~~Ll~~~~~~~~--- 121 (344)
|||+|+..|+.+++++|++ .|. .++.+|.+|+||||+|+..|+ .+++++|+++| ++++
T Consensus 151 pL~~A~~~g~~~~v~~Ll~~~~~ga------d~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g-a~~n~~~ 223 (273)
T 2pnn_A 151 PLSLAACTNQLAIVKFLLQNSWQPA------DISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILG-AKLHPTL 223 (273)
T ss_dssp HHHHHHHTTCHHHHHHHHHCSSCCC------CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-HHHCTTC
T ss_pred HHHHHHHcCCHHHHHHHHhcccCCC------CceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhh-hhccccc
Confidence 9999999999999999999 554 477899999999999999988 79999999999 8886
Q ss_pred ----cccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCC-CCCC
Q 043149 122 ----ARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGG-RERS 160 (344)
Q Consensus 122 ----~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga-~~~~ 160 (344)
.+|..|+||||+|+ ..++.+++++|+++|+ ++..
T Consensus 224 ~~~~~~d~~g~TpL~~A~-----~~g~~~iv~~Ll~~ga~dp~~ 262 (273)
T 2pnn_A 224 KLEEITNRKGLTPLALAA-----SSGKIGVLAYILQREIHEPEC 262 (273)
T ss_dssp CGGGCCCTTSCCHHHHHH-----HTTCHHHHHHHHHHHTC----
T ss_pred ccccccCCCCCCHHHHHH-----HhChHHHHHHHHHCCCCCchh
Confidence 59999999999999 8899999999999999 4444
No 44
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.91 E-value=8.3e-25 Score=195.74 Aligned_cols=146 Identities=15% Similarity=0.157 Sum_probs=127.5
Q ss_pred HHHHHhcCCc----------cccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccc--------------CCCChH
Q 043149 2 VLRLIDFDRN----------LVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVT--------------IRKETA 57 (344)
Q Consensus 2 v~~LL~~~~~----------~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d--------------~~G~t~ 57 (344)
|+.||+.+.+ ..+..|.+|.||||+|+..|+.++++.|++. +.+++..| ..|+||
T Consensus 65 v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~~g~tp 143 (260)
T 3jxi_A 65 IPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEK-GADVHAQARGRFFQPKDEGGYFYFGELP 143 (260)
T ss_dssp HHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCEECCCSSSCCCCSCCSCSSH
T ss_pred HHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhC-CCCcCccccccccCcccccccccCCCCH
Confidence 5667776532 2445566999999999999999999988886 77888888 689999
Q ss_pred HHHHHHcCCHHHHHHHHh---chhccCccccccccCCCCCcHHHHHHHCCc---------HHHHHHHHhccCccc-----
Q 043149 58 LHVAAKYDRLEVLETMLG---WLRYVNMDDILNWKNDEGNTLLHISISRSH---------IQIVRLIVKRVRDQI----- 120 (344)
Q Consensus 58 Lh~A~~~g~~~iv~~Ll~---~~~~~~~~~~ln~~d~~G~TpLH~Aa~~g~---------~~~v~~Ll~~~~~~~----- 120 (344)
||+|+..|+.+++++|++ .|. .++.+|.+|+||||+|+..|+ .+++++|+++| +++
T Consensus 144 L~~A~~~g~~~~v~~Ll~~~~~ga------~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g-a~~~~~~~ 216 (260)
T 3jxi_A 144 LSLAACTNQPHIVHYLTENGHKQA------DLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKC-AKLFPDTN 216 (260)
T ss_dssp HHHHHHTTCHHHHHHHHHCSSCCC------CTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHH-HHHCTTCC
T ss_pred HHHHHHcCCHHHHHHHHhccccCC------CCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhC-cccccccc
Confidence 999999999999999999 544 478899999999999998887 79999999999 888
Q ss_pred --ccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 121 --NARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 121 --~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
+.+|..|+||||+|+ ..++.+++++|+++|++...
T Consensus 217 ~~~~~d~~g~tpL~~A~-----~~g~~~~v~~Ll~~g~~~~~ 253 (260)
T 3jxi_A 217 LEALLNNDGLSPLMMAA-----KTGKIGIFQHIIRREIADAA 253 (260)
T ss_dssp GGGCCCTTSCCHHHHHH-----HTTCHHHHHHHHHHHHHHHC
T ss_pred hhhcccCCCCCHHHHHH-----HcCCHHHHHHHHHhCCCccc
Confidence 789999999999999 89999999999999887665
No 45
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.91 E-value=2e-24 Score=190.74 Aligned_cols=146 Identities=16% Similarity=0.097 Sum_probs=124.6
Q ss_pred HHHHHhcCCc--cccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhc
Q 043149 2 VLRLIDFDRN--LVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRY 79 (344)
Q Consensus 2 v~~LL~~~~~--~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~ 79 (344)
|+.||+.+.+ ..+..+.+|.||||+|+..|+.++++.|++. +.+++..|..|+||||+|+..|+.+++++|++.|.
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga- 78 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKE-MNDPSQPNEEGITALHNAICGANYSIVDFLITAGA- 78 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC-
Confidence 4677777655 2345567888999999999999999999987 67889999999999999999999999999999654
Q ss_pred cCccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCccccccc-CCCCCHHHHH--hhhcCCCccHHHHHHHHHHcCC
Q 043149 80 VNMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARN-SKDNTAMDMV--KFHLQTKPEFEELKSMVRKAGG 156 (344)
Q Consensus 80 ~~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n-~~G~Tpl~~a--~~~~~~~~~~~~i~~~L~~~ga 156 (344)
.+|.+|.+|+||||+|+..|+.+++++|+++| ++++.++ ..|+||||+| + ..++.+++++|++.|+
T Consensus 79 -----~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~g~tpL~~A~a~-----~~~~~~~v~~Ll~~ga 147 (229)
T 2vge_A 79 -----NVNSPDSHGWTPLHCAASCNDTVICMALVQHG-AAIFATTLSDGATAFEKCDPY-----REGYADCATYLADVEQ 147 (229)
T ss_dssp -----CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCSSTTCCTGGGCCTT-----STTHHHHHHHHHHHHH
T ss_pred -----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCcccccCCCCCCHHHHHHHH-----hcChHHHHHHHHHcCC
Confidence 47889999999999999999999999999999 9999986 6999999999 7 8899999999999999
Q ss_pred CCCC
Q 043149 157 RERS 160 (344)
Q Consensus 157 ~~~~ 160 (344)
+++.
T Consensus 148 ~~~~ 151 (229)
T 2vge_A 148 SMGL 151 (229)
T ss_dssp HTTT
T ss_pred Cccc
Confidence 8877
No 46
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.91 E-value=1.7e-24 Score=195.94 Aligned_cols=144 Identities=20% Similarity=0.281 Sum_probs=122.1
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
+|+.||+.+.+ ++.++.+|.||+|+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|+++|.+
T Consensus 101 ~v~~Ll~~~a~-~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~-g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad- 177 (269)
T 4b93_B 101 LIPLLLKHGAN-AGARNADQAVPLHLACQQGHFQVVKCLLDS-NAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGAS- 177 (269)
T ss_dssp HHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCC-
T ss_pred HHHHHHhcCCC-cCccCCCCCCccccccccChHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-
Confidence 46788888877 889999999999999999999999888876 788999999999999999999999999999996644
Q ss_pred CccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccH-HHHHHHHHHcCCCC
Q 043149 81 NMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEF-EELKSMVRKAGGRE 158 (344)
Q Consensus 81 ~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~-~~i~~~L~~~ga~~ 158 (344)
+|.+|..|+||||+|+..|+.+++++|+++| ++++.+|.+|+||||+|+ +.++ .++.+.|...++..
T Consensus 178 -----vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~G-ad~~~~d~~G~TpL~~A~-----~~~~i~~lL~~l~~~~~~~ 245 (269)
T 4b93_B 178 -----INASNNKGNTALHEAVIEKHVFVVELLLLHG-ASVQVLNKRQRTAVDCAE-----QNSKIMELLQVVPSCVASL 245 (269)
T ss_dssp -----TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT-CCSCCCCTTSCCSGGGSC-----TTCHHHHHTTC--------
T ss_pred -----CCccccCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHH-----hCCcHHHHHHHHHHhchhh
Confidence 7889999999999999999999999999999 999999999999999998 5543 34444444444443
No 47
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.91 E-value=1.2e-23 Score=175.57 Aligned_cols=130 Identities=15% Similarity=0.136 Sum_probs=121.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCCCcHHH
Q 043149 19 EGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEGNTLLH 98 (344)
Q Consensus 19 ~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~TpLH 98 (344)
+|.||||.|+..|+.++++.|++. +..++..|..|+||||+|+..|+.+++++|++.+.+ ++..|..|+||||
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~ 74 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQ-ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD------PQLLGKGRESALS 74 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTCCCHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHc-CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC------CCCcCCCCCcHHH
Confidence 689999999999999999999988 677899999999999999999999999999996543 6778999999999
Q ss_pred HHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCCC
Q 043149 99 ISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERSS 161 (344)
Q Consensus 99 ~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~~ 161 (344)
+|+..|+.+++++|++++ ++++.+|..|.||||+|+ ..++.+++++|+++|++++..
T Consensus 75 ~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~ 131 (167)
T 3v31_A 75 LACSKGYTDIVKMLLDCG-VDVNEYDWNGGTPLLYAV-----HGNHVKCVKMLLESGADPTIE 131 (167)
T ss_dssp HHHHHTCHHHHHHHHHHT-CCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHcCCHHHHHHHHHCC-CCCCcCCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCCCCc
Confidence 999999999999999999 999999999999999999 888999999999999998763
No 48
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.91 E-value=3.1e-23 Score=175.41 Aligned_cols=131 Identities=20% Similarity=0.169 Sum_probs=121.0
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCCCcHH
Q 043149 18 REGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEGNTLL 97 (344)
Q Consensus 18 ~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~TpL 97 (344)
.++.+|||.|+..|+.++++.|++..+..++..|..|+||||+|+..|+.+++++|++.+. .++.+|.+|+|||
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~g~t~L 76 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGA------RINVMNRGDDTPL 76 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTCCCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCC------CCCCcCCCCCCHH
Confidence 5689999999999999999999999888899999999999999999999999999999654 4677899999999
Q ss_pred HHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 98 HISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 98 H~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
|+|+..|+.+++++|++++ ++++.+|..|.||||+|+ ..++.+++++|+++|++++.
T Consensus 77 ~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~-----~~~~~~~v~~Ll~~ga~~~~ 133 (179)
T 3f6q_A 77 HLAASHGHRDIVQKLLQYK-ADINAVNEHGNVPLHYAC-----FWGQDQVAEDLVANGALVSI 133 (179)
T ss_dssp HHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHHTTCCSSB
T ss_pred HHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHH-----HcCCHHHHHHHHHCCCCcch
Confidence 9999999999999999999 999999999999999999 88899999999999999876
No 49
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.91 E-value=1.2e-23 Score=195.56 Aligned_cols=153 Identities=24% Similarity=0.327 Sum_probs=119.4
Q ss_pred CHHHHHhcCCccccccCC-CCCcHHHHHHHcCCHHHHHHHHHhCCCC---------------------------------
Q 043149 1 MVLRLIDFDRNLVRVQGR-EGVTPLHYVAEKGNVDLLCKFLAACPES--------------------------------- 46 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~-~G~TpLh~Aa~~G~~~~v~~LL~~~~~~--------------------------------- 46 (344)
+|+.||+.+.+ ++.++. .|+||||+||..|+.++|+.||+.+ ..
T Consensus 40 ~V~~LL~~Gad-vn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (337)
T 4g8k_A 40 LVQQLLEGGAN-VNFQEEEGGWTPLHNAVQMSREDIVELLLRHG-ADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGAD 117 (337)
T ss_dssp HHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCC
T ss_pred HHHHHHHCCCC-CCccCCCCCcCHHHHHHHcCCHHHHHHHHHcC-CchhhhccCCCchhHHHHhcccchhhHHhhhccch
Confidence 47788888776 666654 5888888888888888888777642 21
Q ss_pred ccc-------------------------------------------ccCCCChHHHHHHHcCCHHHHHHHHhc-hhccC-
Q 043149 47 ILQ-------------------------------------------VTIRKETALHVAAKYDRLEVLETMLGW-LRYVN- 81 (344)
Q Consensus 47 ~~~-------------------------------------------~d~~G~t~Lh~A~~~g~~~iv~~Ll~~-~~~~~- 81 (344)
++. .+..|.||||+|+.+|+.+++++|+++ |.+++
T Consensus 118 ~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~ 197 (337)
T 4g8k_A 118 VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNA 197 (337)
T ss_dssp TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTC
T ss_pred hhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCc
Confidence 111 233467788888888888888888853 44332
Q ss_pred ------------------------------ccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHH
Q 043149 82 ------------------------------MDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAM 131 (344)
Q Consensus 82 ------------------------------~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl 131 (344)
.+..+|.+|.+|+||||+|+..|+.++++.|++..++++|.+|.+|+|||
T Consensus 198 ~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL 277 (337)
T 4g8k_A 198 CDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTAL 277 (337)
T ss_dssp CCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHH
T ss_pred cCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHH
Confidence 23456788889999999999999999999999875589999999999999
Q ss_pred HHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 132 DMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 132 ~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
|+|+ ..++.+++++|+++|++++.
T Consensus 278 ~~A~-----~~g~~~iv~~Ll~~GAd~n~ 301 (337)
T 4g8k_A 278 LLAV-----ELKLKKIAELLCKRGASTDC 301 (337)
T ss_dssp HHHH-----HTTCHHHHHHHHTTSCSSTT
T ss_pred HHHH-----HcCCHHHHHHHHHCCCCCCC
Confidence 9999 88899999999999998876
No 50
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.90 E-value=1.5e-23 Score=176.01 Aligned_cols=129 Identities=18% Similarity=0.202 Sum_probs=120.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCCCcHHHH
Q 043149 20 GVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEGNTLLHI 99 (344)
Q Consensus 20 G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~TpLH~ 99 (344)
+.||||.|+..|+.++++.++..++..++..|..|+||||+|+..|+.+++++|+++|.+ ++.+|..|+||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~ 75 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD------PHILAKERESALSL 75 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC------TTCCCTTCCCHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------chhhcccCCCHHHH
Confidence 579999999999999999999997777899999999999999999999999999996544 67789999999999
Q ss_pred HHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 100 SISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 100 Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
|+..|+.+++++|++++ ++++.+|..|+||||+|+ ..++.+++++|+++|++++.
T Consensus 76 A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~ga~~~~ 130 (172)
T 3v30_A 76 ASTGGYTDIVGLLLERD-VDINIYDWNGGTPLLYAV-----RGNHVKCVEALLARGADLTT 130 (172)
T ss_dssp HHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHHTTCCTTC
T ss_pred HHHCCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCccc
Confidence 99999999999999999 999999999999999999 88999999999999999876
No 51
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.90 E-value=5.8e-24 Score=192.91 Aligned_cols=140 Identities=15% Similarity=0.228 Sum_probs=122.3
Q ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHH-----HcCCHHHHHHHHhchhccCccccc
Q 043149 12 LVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAA-----KYDRLEVLETMLGWLRYVNMDDIL 86 (344)
Q Consensus 12 ~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~-----~~g~~~iv~~Ll~~~~~~~~~~~l 86 (344)
.++.+|.+|+||||+|+..|+.++++.|++.+...++..|..|+||||+|+ ..++.+++++|++.|. ..
T Consensus 103 ~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~------~~ 176 (276)
T 4hbd_A 103 VVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGN------IN 176 (276)
T ss_dssp HHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSC------TT
T ss_pred cCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCC------Cc
Confidence 478899999999999999999999999998866688889999999999999 6688899999998653 35
Q ss_pred cccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHH-cCCCCCCCCC
Q 043149 87 NWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRK-AGGRERSSLA 163 (344)
Q Consensus 87 n~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~-~ga~~~~~~~ 163 (344)
+..|..|+||||+|+..|+.+++++|+++| +++|.+|..|+||||+|+ ..++.+++++|++ .|++++....
T Consensus 177 ~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-ad~n~~d~~G~TpLh~A~-----~~g~~~iv~~Ll~~~gad~~~~d~ 248 (276)
T 4hbd_A 177 AKASQAGQTALMLAVSHGRVDVVKALLACE-ADVNVQDDDGSTALMCAC-----EHGHKEIAGLLLAVPSCDISLTDR 248 (276)
T ss_dssp CCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH-----HHTCHHHHHHHHTSTTCCTTCCCT
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCCCCCHHHHHH-----HCCCHHHHHHHHhcCCCCCcCcCC
Confidence 667888999999999999999999999998 999999999999999999 8888999999998 8988876433
No 52
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.90 E-value=3.4e-23 Score=182.52 Aligned_cols=138 Identities=17% Similarity=0.202 Sum_probs=118.3
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHH---hCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCcccccccc
Q 043149 13 VRVQGREGVTPLHYVAEKGNVDLLCKFLA---ACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWK 89 (344)
Q Consensus 13 ~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~---~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~ 89 (344)
++.+|.+|.||||+||..|+.++++.|++ ..+..++..|..|+||||+|+..|+.+++++|++.|.+ ++.+
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~ 75 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS------PMAL 75 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCC------cccc
Confidence 56788999999999999999999998887 46788888999999999999999999999999986543 6678
Q ss_pred CCCCCcHHHHHHHCCcHHHHHHHHhccCc----ccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCCCC
Q 043149 90 NDEGNTLLHISISRSHIQIVRLIVKRVRD----QINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERSSL 162 (344)
Q Consensus 90 d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~----~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~~~ 162 (344)
|.+|+||||+|+..|+.+++++|++.+ . +++..|..|.||+|+|+ ..++.+++++|++.|++++...
T Consensus 76 ~~~g~t~l~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~~~~~g~t~L~~A~-----~~~~~~~~~~Ll~~g~~~~~~~ 146 (241)
T 1k1a_A 76 DRHGQTAAHLACEHRSPTCLRALLDSA-APGTLDLEARNYDGLTALHVAV-----NTECQETVQLLLERGADIDAVD 146 (241)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHS-CTTSCCTTCCCTTSCCHHHHHH-----HHTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccccccCcCCCcHHHHHH-----HcCCHHHHHHHHHcCCCccccc
Confidence 899999999999999999999999987 4 88889999999999999 8888999999999999887644
No 53
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.90 E-value=3.3e-23 Score=186.46 Aligned_cols=148 Identities=20% Similarity=0.266 Sum_probs=134.0
Q ss_pred CHHHHHhcCCcccccc----------CCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCC----
Q 043149 1 MVLRLIDFDRNLVRVQ----------GREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDR---- 66 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~----------d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~---- 66 (344)
+++.|++.+.+ ++.. +..|.||||+|+..|+.++++.|++..+..++..|..|+||||+|+..++
T Consensus 120 ~~~~Ll~~g~~-~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 198 (285)
T 1wdy_A 120 ALKFLYKRGAN-VNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDV 198 (285)
T ss_dssp HHHHHHHTTCC-TTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTH
T ss_pred HHHHHHHhCCC-cccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchH
Confidence 36777877766 4544 78899999999999999999999998889999999999999999999999
Q ss_pred HHHHHHHHhchhccCccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHH
Q 043149 67 LEVLETMLGWLRYVNMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEE 146 (344)
Q Consensus 67 ~~iv~~Ll~~~~~~~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~ 146 (344)
.+++++|+++|. .++.+|..|+||||+|+..|+.+++++|+++.+++++.+|..|+||+|+|+ ..++.+
T Consensus 199 ~~i~~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~-----~~~~~~ 267 (285)
T 1wdy_A 199 EAITHLLLDHGA------DVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAV-----ELKLKK 267 (285)
T ss_dssp HHHHHHHHHTTC------CSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHH-----HTTCHH
T ss_pred HHHHHHHHHcCC------CCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHH-----HcCcHH
Confidence 999999999654 477899999999999999999999999999433999999999999999999 889999
Q ss_pred HHHHHHHcCCCCCC
Q 043149 147 LKSMVRKAGGRERS 160 (344)
Q Consensus 147 i~~~L~~~ga~~~~ 160 (344)
++++|+++|++++.
T Consensus 268 i~~~Ll~~Ga~~~~ 281 (285)
T 1wdy_A 268 IAELLCKRGASTDC 281 (285)
T ss_dssp HHHHHHHHSSCSCC
T ss_pred HHHHHHHcCCCCCc
Confidence 99999999999886
No 54
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.90 E-value=3.6e-23 Score=182.18 Aligned_cols=137 Identities=21% Similarity=0.318 Sum_probs=114.9
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCC
Q 043149 13 VRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDE 92 (344)
Q Consensus 13 ~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~ 92 (344)
.+.+|.+|.||||+|+..|+.++++.|++. +..++..|..|+||||+|+..|+.+++++|++.|. .++.+|..
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~ 76 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQA-GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGA------LVDPKDAE 76 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC------CCCCCCTT
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHc-CCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCC------CCCCCCCC
Confidence 567788888999999999999888888776 66778888888899999998889999988888543 36677888
Q ss_pred CCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCCC
Q 043149 93 GNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERSS 161 (344)
Q Consensus 93 G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~~ 161 (344)
|.||||+|+..|+.+++++|++.++.+++..|..|.||+|+|+ ..++.+++++|++.|++++..
T Consensus 77 g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~-----~~~~~~~~~~Ll~~g~~~~~~ 140 (237)
T 3b7b_A 77 GSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWAT-----EYKHVDLVKLLLSKGSDINIR 140 (237)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCC
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHH-----HcCCHHHHHHHHHCCCCCCcc
Confidence 8899999998888999998888877788888888889999888 777888888888888887664
No 55
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.90 E-value=8.3e-24 Score=196.52 Aligned_cols=145 Identities=18% Similarity=0.216 Sum_probs=127.6
Q ss_pred HHHHhcCCccccc-cCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCC---HHHHHHHHhchh
Q 043149 3 LRLIDFDRNLVRV-QGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDR---LEVLETMLGWLR 78 (344)
Q Consensus 3 ~~LL~~~~~~~~~-~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~---~~iv~~Ll~~~~ 78 (344)
+.|++.+.+ ++. +|.+|+||||+||..|+.++|+.||+. +.+++.+|..|+||||+|+.+|+ .++++.|++++.
T Consensus 114 ~~l~~~g~d-vn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~-Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~ 191 (327)
T 1sw6_A 114 DAFPNTQLN-LNIPVDEHGNTPLHWLTSIANLELVKHLVKH-GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLY 191 (327)
T ss_dssp HHCTTSCCC-SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHG
T ss_pred HHHHhcCCC-cccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhh
Confidence 344444444 788 899999999999999999999998887 78899999999999999999998 688888888652
Q ss_pred ccCccccccccCCCCCcHHHHHHH----CCcHHHHHHHHhccCc------------------------------------
Q 043149 79 YVNMDDILNWKNDEGNTLLHISIS----RSHIQIVRLIVKRVRD------------------------------------ 118 (344)
Q Consensus 79 ~~~~~~~ln~~d~~G~TpLH~Aa~----~g~~~~v~~Ll~~~~~------------------------------------ 118 (344)
..++.+|.+|+||||+|+. .|+.+++++|++.+ .
T Consensus 192 -----~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~-~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a 265 (327)
T 1sw6_A 192 -----PCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDIL-MGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILEN 265 (327)
T ss_dssp -----GGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHH-HHHHHHGGGCCEEEC----------------CHHHHH
T ss_pred -----ccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHH-HHHHhcccchHHHhhhhcccCCcccccccCCChhHHH
Confidence 2378899999999999999 99999999999874 2
Q ss_pred ---------ccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 119 ---------QINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 119 ---------~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
++|.+|..|+||||+|+ ..++.+++++|+++|++++.
T Consensus 266 ~~~~~Ll~~~~n~~d~~G~TpLh~A~-----~~g~~~~v~~Ll~~Gad~~~ 311 (327)
T 1sw6_A 266 LDLKWIIANMLNAQDSNGDTCLNIAA-----RLGNISIVDALLDYGADPFI 311 (327)
T ss_dssp CSHHHHHHHTTTCCCTTSCCHHHHHH-----HHCCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHHhCCCCCCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCCcc
Confidence 58889999999999999 88999999999999999887
No 56
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.90 E-value=7.8e-24 Score=192.89 Aligned_cols=145 Identities=16% Similarity=0.132 Sum_probs=120.0
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCC-ChHHHHHHHcCCHHHHHHHHhchhc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRK-ETALHVAAKYDRLEVLETMLGWLRY 79 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G-~t~Lh~A~~~g~~~iv~~Ll~~~~~ 79 (344)
+|+.|++.+.+ ++.+|..|.||||+|+..|+.++++.|++. +.+++..|..| .||||+|+..|+.+++++|++++.+
T Consensus 77 ~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~ 154 (285)
T 3kea_A 77 IVKILLFSGLD-DSQFDDKGNTALYYAVDSGNMQTVKLFVKK-NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS 154 (285)
T ss_dssp HHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-CGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCT
T ss_pred HHHHHHHCCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCc
Confidence 36677777666 777888888888888888888888877776 67777888888 7888888888888888888886543
Q ss_pred cCccccccccCC-CCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCH-HHHHhhhcCCCccHHHHHHHHHHcCCC
Q 043149 80 VNMDDILNWKND-EGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTA-MDMVKFHLQTKPEFEELKSMVRKAGGR 157 (344)
Q Consensus 80 ~~~~~~ln~~d~-~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tp-l~~a~~~~~~~~~~~~i~~~L~~~ga~ 157 (344)
. .|. .|+||||+|+..|+.+++++|+++| ++++.+|..|+|| ||+|+ ..++.+++++|+++|++
T Consensus 155 ~--------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-ad~n~~~~~g~t~~L~~A~-----~~~~~~~v~~Ll~~gad 220 (285)
T 3kea_A 155 T--------FDLAILLSCIHITIKNGHVDMMILLLDYM-TSTNTNNSLLFIPDIKLAI-----DNKDIEMLQALFKYDIN 220 (285)
T ss_dssp T--------CCCSTHHHHHHHHHHTTCHHHHHHHHHHH-HHTCTTCCCBCCTTHHHHH-----HHTCHHHHHHHTTSCBC
T ss_pred c--------ccccCCccHHHHHHHcChHHHHHHHHHcC-CCCCcccCCCCChHHHHHH-----HcCCHHHHHHHHHcCCC
Confidence 2 232 7889999999999999999999998 9999999999997 99999 88889999999999999
Q ss_pred CCCC
Q 043149 158 ERSS 161 (344)
Q Consensus 158 ~~~~ 161 (344)
++..
T Consensus 221 ~~~~ 224 (285)
T 3kea_A 221 IYSA 224 (285)
T ss_dssp STTT
T ss_pred CCCC
Confidence 8874
No 57
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=1.6e-23 Score=166.31 Aligned_cols=111 Identities=20% Similarity=0.249 Sum_probs=101.9
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCCCcH
Q 043149 17 GREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEGNTL 96 (344)
Q Consensus 17 d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~Tp 96 (344)
+..|.||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++++. .++.+|.+|+||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~d~~g~tp 76 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAK-GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGA------DINAPDKHHITP 76 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHT-TCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTC------CTTCCCTTSCCH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHc-CCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCC------CCCcCCCCCCCH
Confidence 56789999999999999999999886 67789999999999999999999999999999654 478899999999
Q ss_pred HHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHh
Q 043149 97 LHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVK 135 (344)
Q Consensus 97 LH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~ 135 (344)
||+|+..|+.+++++|++++ ++++.+|.+|+||+|+|.
T Consensus 77 L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 77 LLSAVYEGHVSCVKLLLSKG-ADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHCC
T ss_pred HHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHhC
Confidence 99999999999999999998 999999999999999997
No 58
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.90 E-value=1.4e-23 Score=197.11 Aligned_cols=136 Identities=17% Similarity=0.187 Sum_probs=126.0
Q ss_pred cCCCCCcHHHHHHHcC--CHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCC
Q 043149 16 QGREGVTPLHYVAEKG--NVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEG 93 (344)
Q Consensus 16 ~d~~G~TpLh~Aa~~G--~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G 93 (344)
+|.+|.||||+|+..| +.++++.|++. +.+++..|..|+||||+|+.+|+.+++++|++++.+. ....++.+|..|
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~-ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~~~~~g 211 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQL-GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSK-SSLRLDYANKQG 211 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCS-SSCCTTCCCTTC
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccccc-ccccccccCCCC
Confidence 8889999999999999 99999999987 7889999999999999999999999999999977552 233488899999
Q ss_pred CcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCC
Q 043149 94 NTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRER 159 (344)
Q Consensus 94 ~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~ 159 (344)
+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+ ..++.+++++|+++|++..
T Consensus 212 ~t~L~~A~~~g~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~-----~~g~~~~v~~Ll~~~~~~~ 271 (364)
T 3ljn_A 212 NSHLHWAILINWEDVAMRFVEMG-IDVNMEDNEHTVPLYLSV-----RAAMVLLTKELLQKTDVFL 271 (364)
T ss_dssp CCTTHHHHTTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHH-----HTCCHHHHHHHHHHSCHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHH-----HhChHHHHHHHHHcCCchh
Confidence 99999999999999999999999 999999999999999999 8899999999999988753
No 59
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.90 E-value=4.2e-24 Score=190.81 Aligned_cols=145 Identities=15% Similarity=0.136 Sum_probs=121.4
Q ss_pred HHHHhcCCccccc----cCCCCCcHHHHHHHc---CCHHHHHHHHHhCCCCcc-----------cccCCCChHHHHHHHc
Q 043149 3 LRLIDFDRNLVRV----QGREGVTPLHYVAEK---GNVDLLCKFLAACPESIL-----------QVTIRKETALHVAAKY 64 (344)
Q Consensus 3 ~~LL~~~~~~~~~----~d~~G~TpLh~Aa~~---G~~~~v~~LL~~~~~~~~-----------~~d~~G~t~Lh~A~~~ 64 (344)
+.|++.+.+ ++. +|.+|+||||+|+.. |+.++++.|++.+ ...+ ..|..|+||||+|+..
T Consensus 23 ~~l~~~g~~-i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~ 100 (256)
T 2etb_A 23 EYLRWNSKY-LTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQID-KDSGNPKPLVNAQCTDEFYQGHSALHIAIEK 100 (256)
T ss_dssp HHHHHHTCC-TTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHH-HHTTCSSCGGGCCCCSTTTTTCCHHHHHHHT
T ss_pred HHHHHcCCC-cccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcC-CcccchhhhcccccccccccCCCHHHHHHHc
Confidence 444455665 666 899999999999999 9999999999863 3222 2347799999999999
Q ss_pred CCHHHHHHHHhchhccCccccccccCCC-------------CCcHHHHHHHCCcHHHHHHHHh---ccCcccccccCCCC
Q 043149 65 DRLEVLETMLGWLRYVNMDDILNWKNDE-------------GNTLLHISISRSHIQIVRLIVK---RVRDQINARNSKDN 128 (344)
Q Consensus 65 g~~~iv~~Ll~~~~~~~~~~~ln~~d~~-------------G~TpLH~Aa~~g~~~~v~~Ll~---~~~~~~~~~n~~G~ 128 (344)
|+.+++++|+++|.+ ++.+|.. |+||||+|+..|+.+++++|++ +| +++|.+|..|+
T Consensus 101 g~~~~v~~Ll~~ga~------~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~g-a~~n~~d~~g~ 173 (256)
T 2etb_A 101 RSLQCVKLLVENGAD------VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQP-ASLEATDSLGN 173 (256)
T ss_dssp TCHHHHHHHHHTTCC------TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC-CCTTCCCTTSC
T ss_pred CCHHHHHHHHHcCCC------CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC-CCcCccCCCCC
Confidence 999999999997655 4555554 9999999999999999999999 77 99999999999
Q ss_pred CHHHHHhhhcCCCccHHH-------HHHHHHHcCCCCC
Q 043149 129 TAMDMVKFHLQTKPEFEE-------LKSMVRKAGGRER 159 (344)
Q Consensus 129 Tpl~~a~~~~~~~~~~~~-------i~~~L~~~ga~~~ 159 (344)
||||+|+.. ..++.+ ++++|+++|+++.
T Consensus 174 TpLh~A~~~---~~~~~~~~~~~~~iv~~Ll~~ga~~~ 208 (256)
T 2etb_A 174 TVLHALVMI---ADNSPENSALVIHMYDGLLQMGARLC 208 (256)
T ss_dssp CHHHHHHHH---CCSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHc---ccCCchhhHHHHHHHHHHHHcCCCcc
Confidence 999999921 155666 9999999999883
No 60
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.90 E-value=4.2e-24 Score=189.54 Aligned_cols=146 Identities=17% Similarity=0.145 Sum_probs=116.4
Q ss_pred HHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccC
Q 043149 2 VLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVN 81 (344)
Q Consensus 2 v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ 81 (344)
++.||+.+.+ ++. +..|.||||.|+..|+.++++.|++. +.+++.+|..|+||||+|+.+|+.+++++|+++|.
T Consensus 21 ~~~ll~~g~~-~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga--- 94 (239)
T 1ycs_B 21 GSERIAHGMR-VKF-NPLPLALLLDSSLEGEFDLVQRIIYE-VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGV--- 94 (239)
T ss_dssp ------------------CHHHHHHHHHHTCHHHHHHHTST-TSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTC---
T ss_pred HHHHhccCCC-ccc-CchhhHHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC---
Confidence 5667777766 443 47889999999999999999888876 66889999999999999999999999999999654
Q ss_pred ccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCC-CHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 82 MDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDN-TAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 82 ~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~-Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
.+|.+|.+|+||||+|+..|+.+++++|++++ ++++.+|..|. ||+|+|.. ...++.+++++|+++|++.+.
T Consensus 95 ---~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~~~~t~l~~a~~---~~~g~~~~~~~Ll~~~a~~~~ 167 (239)
T 1ycs_B 95 ---NVNAADSDGWTPLHCAASCNNVQVCKFLVESG-AAVFAMTYSDMQTAADKCEE---MEEGYTQCSQFLYGVQEKMGI 167 (239)
T ss_dssp ---CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCSSSCCCHHHHCCS---SSTTCCCHHHHHHHHHHHTTT
T ss_pred ---CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCcceecCCCCcchHHHHHH---hhhccHHHHHHHHHhhhcccc
Confidence 37889999999999999999999999999999 99999998887 99999931 167788999999999988776
No 61
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.90 E-value=2.4e-23 Score=195.53 Aligned_cols=147 Identities=17% Similarity=0.191 Sum_probs=96.0
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
+|+.||+.+.+ ++.+|..|.||||+||..|+.++++.|++.+. . ..+.+|+||||+|+..|+.+++++|++++.+.
T Consensus 35 ~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 110 (364)
T 3ljn_A 35 EVRRLIETGVS-PTIQNRFGCTALHLACKFGCVDTAKYLASVGE-V--HSLWHGQKPIHLAVMANKTDLVVALVEGAKER 110 (364)
T ss_dssp HHHHHHHTTCC-TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCC-C--CCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCC-ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCC-C--ccccCCCCHHHHHHHcCCHHHHHHHHHhcccc
Confidence 46788888766 88899999999999999999999998888743 2 22345666666666666666666666652211
Q ss_pred Cc---------------cccccccCCCCCcHHHHHHHCC--cHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCcc
Q 043149 81 NM---------------DDILNWKNDEGNTLLHISISRS--HIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPE 143 (344)
Q Consensus 81 ~~---------------~~~ln~~d~~G~TpLH~Aa~~g--~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~ 143 (344)
.. ....+..|.+|.||||+|+..| +.+++++|++++ ++++.+|..|.||||+|+ ..+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~g-a~~~~~d~~g~t~L~~A~-----~~g 184 (364)
T 3ljn_A 111 GQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLG-ASPTAKDKADETPLMRAM-----EFR 184 (364)
T ss_dssp TCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHT-CCTTCCCTTSCCHHHHHH-----HTT
T ss_pred CCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcC-CCCcccCCCCCCHHHHHH-----HcC
Confidence 00 0112225566666666666666 666666666665 666666666666666666 555
Q ss_pred HHHHHHHHHHcCCC
Q 043149 144 FEELKSMVRKAGGR 157 (344)
Q Consensus 144 ~~~i~~~L~~~ga~ 157 (344)
+.+++++|+++|++
T Consensus 185 ~~~~v~~Ll~~g~~ 198 (364)
T 3ljn_A 185 NREALDLMMDTVPS 198 (364)
T ss_dssp CHHHHHHHHHHCSC
T ss_pred CHHHHHHHHhcccc
Confidence 66666666666555
No 62
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.90 E-value=1.1e-23 Score=184.41 Aligned_cols=135 Identities=22% Similarity=0.241 Sum_probs=114.9
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCC
Q 043149 14 RVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEG 93 (344)
Q Consensus 14 ~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G 93 (344)
+..+.+|.||||+||..|+.++++.|++. +..++.+|..|+||||+|+.+|+.+++++|++. .+..++.+|.+|
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----~g~~~~~~d~~g 140 (222)
T 3ehr_A 67 AEQAESIDNPLHEAAKRGNLSWLRECLDN-RVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQ-----PNIELNQQNKLG 140 (222)
T ss_dssp HHHEEEESCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTS-----TTCCCCCCCTTS
T ss_pred cccccccccccccccccCcHHHHHHHHhC-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHcC-----CCCCccccCCCC
Confidence 44677899999999999999999999985 778899999999999999999999999999985 134578899999
Q ss_pred CcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 94 NTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 94 ~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
+||||+|+..|+.+++++|+++| ++++.+|.+|+||+++|+ ..+..++++.|++.|+....
T Consensus 141 ~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~-----~~~~~~~l~~l~~~~~~~~~ 201 (222)
T 3ehr_A 141 DTALHAAAWKGYADIVQLLLAKG-ARTDLRNIEKKLAFDMAT-----NAACASLLKKKQGTDAVRTL 201 (222)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHT-CCSCCCCTTSCCHHHHCC-----SHHHHHHHC-----------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcC-CCCccccCCCCCHHHHhc-----chhHHHHHHHHhccchhhhc
Confidence 99999999999999999999999 999999999999999999 89999999999999988766
No 63
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.90 E-value=3.9e-23 Score=198.70 Aligned_cols=145 Identities=17% Similarity=0.328 Sum_probs=94.4
Q ss_pred HHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccC
Q 043149 2 VLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVN 81 (344)
Q Consensus 2 v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ 81 (344)
++.|++.+.+ ++..+..|.||||+|+..|+.++++.|++. +...+..|..|+||||+|+..|+.+++++|++++
T Consensus 228 ~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g---- 301 (437)
T 1n11_A 228 ARSLLQYGGS-ANAESVQGVTPLHLAAQEGHAEMVALLLSK-QANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHG---- 301 (437)
T ss_dssp HHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHT----
T ss_pred HHHHHHcCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC----
Confidence 3444444443 455555556666666666666665555543 4445555556666666666666666666666543
Q ss_pred ccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 82 MDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 82 ~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
..++.+|..|+||||+|+..|+.+++++|++++ +++|.+|..|+||||+|+ ..++.+++++|+++|++++.
T Consensus 302 --~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-ad~n~~~~~g~t~L~~A~-----~~g~~~iv~~Ll~~ga~~~~ 372 (437)
T 1n11_A 302 --VMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQ-ADVNAKTKLGYSPLHQAA-----QQGHTDIVTLLLKNGASPNE 372 (437)
T ss_dssp --CCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTT-CCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHHTTCCSCC
T ss_pred --ccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcC-CCCCCCCCCCCCHHHHHH-----HCChHHHHHHHHHCcCCCCC
Confidence 335667777777777777777777777777777 777777777777777777 66777777777777777765
No 64
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.90 E-value=5.2e-23 Score=172.46 Aligned_cols=134 Identities=22% Similarity=0.230 Sum_probs=121.2
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCC
Q 043149 14 RVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEG 93 (344)
Q Consensus 14 ~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G 93 (344)
......+.||||.||..|+.++++.|++. +.+++..|..|+||||+|+..|+.+++++|++++. .++.+|..|
T Consensus 8 ~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~g 80 (169)
T 2y1l_E 8 HHHGSDLGKKLLEAARAGRDDEVRILMAN-GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGA------DVNAVDHAG 80 (169)
T ss_dssp -----CHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTS
T ss_pred ccCCCcccchHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCCccCCCC
Confidence 34567789999999999999999999887 77888999999999999999999999999999654 367789999
Q ss_pred CcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 94 NTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 94 ~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
+||||+|+..|+.+++++|++++ ++++.+|..|.||||+|+ ..++.+++++|+++|++++.
T Consensus 81 ~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~ 141 (169)
T 2y1l_E 81 MTPLRLAALFGHLEIVEVLLKNG-ADVNANDMEGHTPLHLAA-----MFGHLEIVEVLLKNGADVNA 141 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHHTTCCTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999 999999999999999999 88899999999999999876
No 65
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.89 E-value=3.5e-23 Score=188.54 Aligned_cols=142 Identities=18% Similarity=0.134 Sum_probs=126.9
Q ss_pred HHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccC
Q 043149 2 VLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVN 81 (344)
Q Consensus 2 v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ 81 (344)
|..+|..+ .++.+|.+|.||||+|+..|+.++++.|++. +.+++.. +|+||||+|+..|+.+++++|+++|.+
T Consensus 15 v~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~-- 87 (285)
T 3kea_A 15 LKSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNA-GALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLD-- 87 (285)
T ss_dssp HHHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCC--
T ss_pred HHHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCC--
Confidence 34566554 3789999999999999999999999999987 6666665 599999999999999999999996544
Q ss_pred ccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCC-CCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 82 MDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKD-NTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 82 ~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G-~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
++.+|..|+||||+|+..|+.+++++|+++| ++++.+|..| .||||+|+ ..++.+++++|+++|++...
T Consensus 88 ----~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~g~~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~ 157 (285)
T 3kea_A 88 ----DSQFDDKGNTALYYAVDSGNMQTVKLFVKKN-WRLMFYGKTGWKTSFYHAV-----MLNDVSIVSYFLSEIPSTFD 157 (285)
T ss_dssp ----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHC-GGGGGCSSSGGGSHHHHHH-----HTTCHHHHHHHHTTSCTTCC
T ss_pred ----CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcC-CCCCccCCCCCCCHHHHHH-----HcCCHHHHHHHHhCCCcccc
Confidence 6779999999999999999999999999998 9999999999 89999999 88899999999999988743
No 66
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.89 E-value=2.1e-23 Score=189.24 Aligned_cols=142 Identities=21% Similarity=0.294 Sum_probs=130.6
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHH-----HcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHh
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVA-----EKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLG 75 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa-----~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~ 75 (344)
+|+.||+.+...++..|..|.||||+|+ ..|+.++++.|+.. +...+..|..|+||||+|+.+|+.+++++|++
T Consensus 126 ~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~-g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~ 204 (276)
T 4hbd_A 126 VVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRL-GNINAKASQAGQTALMLAVSHGRVDVVKALLA 204 (276)
T ss_dssp HHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHH-SCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 4788999998679999999999999999 67899999988887 67778889999999999999999999999999
Q ss_pred chhccCccccccccCCCCCcHHHHHHHCCcHHHHHHHHh-ccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHc
Q 043149 76 WLRYVNMDDILNWKNDEGNTLLHISISRSHIQIVRLIVK-RVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKA 154 (344)
Q Consensus 76 ~~~~~~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~-~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ 154 (344)
.|.+ +|.+|.+|+||||+|+..|+.+++++|++ .+ ++++.+|..|+||||+|+ ..++.+++++|+++
T Consensus 205 ~gad------~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g-ad~~~~d~~g~TpL~~A~-----~~g~~~iv~~Ll~~ 272 (276)
T 4hbd_A 205 CEAD------VNVQDDDGSTALMCACEHGHKEIAGLLLAVPS-CDISLTDRDGSTALMVAL-----DAGQSEIASMLYSR 272 (276)
T ss_dssp TTCC------TTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTT-CCTTCCCTTSCCHHHHHH-----HHTCHHHHHHHHHH
T ss_pred CCCC------CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCC-CCCcCcCCCCCCHHHHHH-----HcCCHHHHHHHHhc
Confidence 6544 78899999999999999999999999999 66 999999999999999999 88999999999987
Q ss_pred C
Q 043149 155 G 155 (344)
Q Consensus 155 g 155 (344)
+
T Consensus 273 ~ 273 (276)
T 4hbd_A 273 M 273 (276)
T ss_dssp C
T ss_pred c
Confidence 5
No 67
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.89 E-value=1e-22 Score=178.81 Aligned_cols=147 Identities=16% Similarity=0.238 Sum_probs=85.4
Q ss_pred HHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCc
Q 043149 3 LRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNM 82 (344)
Q Consensus 3 ~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~ 82 (344)
+.|++.+++.....+..|.||||+|+..|+.++++.|++. +..++..|..|+||||+|+..|+.+++++|++++
T Consensus 59 ~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~----- 132 (240)
T 3eu9_A 59 KYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKY-GADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKG----- 132 (240)
T ss_dssp HHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----
T ss_pred HHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcC-----
Confidence 3344444433333333344444444444444444444332 3334444444444444444444444444444432
Q ss_pred cccccccCCCCCcHHHHHHHCCc-HHHHHHHHhccCcccccccC-CCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 83 DDILNWKNDEGNTLLHISISRSH-IQIVRLIVKRVRDQINARNS-KDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 83 ~~~ln~~d~~G~TpLH~Aa~~g~-~~~v~~Ll~~~~~~~~~~n~-~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
..++.+|.+|.||||+|+..++ .+++++|++.+ ++++..+. .|.||||+|+ ..++.+++++|+++|++++.
T Consensus 133 -~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~-~~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~ 205 (240)
T 3eu9_A 133 -QDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFN-VSVNLGDKYHKNTALHWAV-----LAGNTTVISLLLEAGANVDA 205 (240)
T ss_dssp -CCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTT-CCTTCCCTTTCCCHHHHHH-----HHTCHHHHHHHHHHTCCTTC
T ss_pred -CCccccCCCCCcHHHHHHHhCChHHHHHHHHhcC-CCcchhhccCCCcHHHHHH-----HcCCHHHHHHHHHcCCCCCC
Confidence 2345566666677777664444 56666666666 77888886 8889999998 78888899999999888876
Q ss_pred CC
Q 043149 161 SL 162 (344)
Q Consensus 161 ~~ 162 (344)
..
T Consensus 206 ~~ 207 (240)
T 3eu9_A 206 QN 207 (240)
T ss_dssp BC
T ss_pred cC
Confidence 43
No 68
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.89 E-value=8.8e-23 Score=168.12 Aligned_cols=127 Identities=21% Similarity=0.247 Sum_probs=116.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCCCcHHHH
Q 043149 20 GVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEGNTLLHI 99 (344)
Q Consensus 20 G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~TpLH~ 99 (344)
+.||||.|+..|+.++++.|++.+. ..+ .|..|+||||+|+.+|+.+++++|++.+. .++.+|..|+||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~-~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~g~t~L~~ 73 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGA-PFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGV------SRDARTKVDRTPLHM 73 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTC-CCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTC------CTTCCCTTCCCHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCC-CCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCCCCCCCCCCHHHH
Confidence 5689999999999999999999854 444 58899999999999999999999999654 367789999999999
Q ss_pred HHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 100 SISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 100 Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
|+..|+.+++++|++++ ++++.+|..|+||+|+|+ ..++.+++++|+++|++++.
T Consensus 74 A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~ga~~~~ 128 (153)
T 1awc_B 74 AASEGHANIVEVLLKHG-ADVNAKDMLKMTALHWAT-----EHNHQEVVELLIKYGADVHT 128 (153)
T ss_dssp HHHHTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHHTTCCTTC
T ss_pred HHHcChHHHHHHHHHcC-CCCCCCCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCccc
Confidence 99999999999999999 999999999999999999 88899999999999999876
No 69
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.89 E-value=7e-23 Score=193.61 Aligned_cols=151 Identities=17% Similarity=0.172 Sum_probs=99.6
Q ss_pred HHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchh---c
Q 043149 3 LRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLR---Y 79 (344)
Q Consensus 3 ~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~---~ 79 (344)
+.|++.+.+ ++.+|.+|.||||+|+..|+.++++.|++. +.+++..|..|+||||+|+..|+.+++++|++.+. +
T Consensus 150 ~~ll~~ga~-vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~-ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~ 227 (373)
T 2fo1_E 150 KECIAAGAD-VNAMDCDENTPLMLAVLARRRRLVAYLMKA-GADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGD 227 (373)
T ss_dssp HHHHHTCCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHT
T ss_pred HHHHhcCCC-CcCCCCCCCCHHHHHHHcChHHHHHHHHHC-CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccC
Confidence 445666655 777888888888888888888888777765 66677777788888888888888888888777651 1
Q ss_pred cC------------------------------cccc--------ccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccc
Q 043149 80 VN------------------------------MDDI--------LNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQIN 121 (344)
Q Consensus 80 ~~------------------------------~~~~--------ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~ 121 (344)
.+ .+.. .+..|..|+||||+|+..|+.+++++|+++++++++
T Consensus 228 ~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n 307 (373)
T 2fo1_E 228 IEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKD 307 (373)
T ss_dssp TSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTT
T ss_pred hhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCcc
Confidence 11 0001 112445566666666666666666666655446666
Q ss_pred cccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 122 ARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 122 ~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
.+|..|+||||+|+ ..++.+++++|+++|++++.
T Consensus 308 ~~d~~g~TpL~~A~-----~~g~~~iv~~Ll~~gad~~~ 341 (373)
T 2fo1_E 308 KQDEDGKTPIMLAA-----QEGRIEVVMYLIQQGASVEA 341 (373)
T ss_dssp CCCTTCCCHHHHHH-----HHTCHHHHHHHHHTTCCSSC
T ss_pred CcCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCccC
Confidence 66666666666666 55666666666666666554
No 70
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.88 E-value=5.8e-23 Score=185.29 Aligned_cols=134 Identities=17% Similarity=0.219 Sum_probs=114.9
Q ss_pred ccCCCCCcHHHHHHHc---CCHHHHHHHHHhCCC----------CcccccCCCChHHHHHHHcCCHHHHHHHHhchhccC
Q 043149 15 VQGREGVTPLHYVAEK---GNVDLLCKFLAACPE----------SILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVN 81 (344)
Q Consensus 15 ~~d~~G~TpLh~Aa~~---G~~~~v~~LL~~~~~----------~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ 81 (344)
..|..|+||||+|+.. |+.++++.|++.+.. .....|..|+||||+|+..|+.+++++|+++|.+
T Consensus 49 ~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~-- 126 (273)
T 2pnn_A 49 KDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD-- 126 (273)
T ss_dssp SCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC--
T ss_pred ccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC--
Confidence 4588999999999987 999999999987321 1223567899999999999999999999997765
Q ss_pred ccccccccCC--------------CCCcHHHHHHHCCcHHHHHHHHh---ccCcccccccCCCCCHHHHHhhhcCCCccH
Q 043149 82 MDDILNWKND--------------EGNTLLHISISRSHIQIVRLIVK---RVRDQINARNSKDNTAMDMVKFHLQTKPEF 144 (344)
Q Consensus 82 ~~~~ln~~d~--------------~G~TpLH~Aa~~g~~~~v~~Ll~---~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~ 144 (344)
++.+|. .|+||||+|+..|+.+++++|++ .+ ++++.+|..|+||||+|+ ..++
T Consensus 127 ----~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g-ad~~~~d~~g~tpLh~A~-----~~~~ 196 (273)
T 2pnn_A 127 ----VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQP-ADISARDSVGNTVLHALV-----EVAD 196 (273)
T ss_dssp ----TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCC-CCTTCCCTTSCCHHHHHH-----HHCC
T ss_pred ----cCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCC-CCceeeCCCCCcHHHHHH-----HccC
Confidence 444554 89999999999999999999999 77 999999999999999999 4443
Q ss_pred ---------HHHHHHHHHcCCCCCC
Q 043149 145 ---------EELKSMVRKAGGRERS 160 (344)
Q Consensus 145 ---------~~i~~~L~~~ga~~~~ 160 (344)
.+++++|+++|++++.
T Consensus 197 ~~~~~~~~~~~~v~~Ll~~ga~~n~ 221 (273)
T 2pnn_A 197 NTVDNTKFVTSMYNEILILGAKLHP 221 (273)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred cchhHHHHHHHHHHHHHHhhhhccc
Confidence 6899999999998864
No 71
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.88 E-value=2.1e-23 Score=178.42 Aligned_cols=137 Identities=14% Similarity=0.001 Sum_probs=109.7
Q ss_pred HHHHhcCCccccccC-CCCCcHHHHHHHcCCH----HHHHHHHHhCCCCcccccCCCChHHHHHHHcCC------HHHHH
Q 043149 3 LRLIDFDRNLVRVQG-REGVTPLHYVAEKGNV----DLLCKFLAACPESILQVTIRKETALHVAAKYDR------LEVLE 71 (344)
Q Consensus 3 ~~LL~~~~~~~~~~d-~~G~TpLh~Aa~~G~~----~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~------~~iv~ 71 (344)
+.++..+. +..+ ..|+||||+|+..|+. ++++.||+. +.+++.+|..|+||||+|+..++ .++++
T Consensus 23 ~~l~~~~~---~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~-Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~ 98 (186)
T 3t8k_A 23 LELFEKGY---EDKESVLKSNILYDVLRNNNDEARYKISMFLINK-GADIKSRTKEGTTLFFPLFQGGGNDITGTTELCK 98 (186)
T ss_dssp HHHHHHSS---SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHT-TCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHhcCc---ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHH
Confidence 44555443 3344 7799999999999875 478777765 88889999999999999998887 57899
Q ss_pred HHHhchhccCccccccccCCCCC-cHHHHHHHCC-----cHHHHHHHHh-ccCcccccccCCCCCHHHHHhhhcCCCccH
Q 043149 72 TMLGWLRYVNMDDILNWKNDEGN-TLLHISISRS-----HIQIVRLIVK-RVRDQINARNSKDNTAMDMVKFHLQTKPEF 144 (344)
Q Consensus 72 ~Ll~~~~~~~~~~~ln~~d~~G~-TpLH~Aa~~g-----~~~~v~~Ll~-~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~ 144 (344)
+|+++|++ +|.+|.+|+ ||||+|+..+ +.+++++|++ +| ++++.+|..|+||||+|+ ..++
T Consensus 99 ~Ll~~Gad------in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~g-ad~~~~d~~G~TpL~~A~-----~~~~ 166 (186)
T 3t8k_A 99 IFLEKGAD------ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSG-LQLLIKDKWGLTALEFVK-----RCQK 166 (186)
T ss_dssp HHHHTTCC------SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTT-CCTTCCCTTSCCHHHHHH-----TTTC
T ss_pred HHHHCCCC------CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcC-CCCcccCCCCCCHHHHHH-----HcCC
Confidence 99986544 778899999 9999998844 3568899998 77 999999999999999999 8888
Q ss_pred HHHHHHHHHcC
Q 043149 145 EELKSMVRKAG 155 (344)
Q Consensus 145 ~~i~~~L~~~g 155 (344)
.+++++|.+..
T Consensus 167 ~~~v~~L~~~~ 177 (186)
T 3t8k_A 167 PIALKMMEDYI 177 (186)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888888653
No 72
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.88 E-value=1.2e-22 Score=167.55 Aligned_cols=128 Identities=13% Similarity=0.142 Sum_probs=118.6
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCCCcHHH
Q 043149 19 EGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEGNTLLH 98 (344)
Q Consensus 19 ~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~TpLH 98 (344)
+|.||||.|+..|+.++++.|++..+..++..|..|+||||+ +.+|+.+++++|+++|.+ ++.+|..|+||||
T Consensus 1 r~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~ 73 (156)
T 1bd8_A 1 RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGAS------PNVQDTSGTSPVH 73 (156)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC------TTCCCTTSCCHHH
T ss_pred CcchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC------CCCcCCCCCCHHH
Confidence 367999999999999999999998666889999999999999 999999999999996544 6789999999999
Q ss_pred HHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 99 ISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 99 ~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
+|+..|+.+++++|+++| ++++.+|..|+||||+|+ ..++.+++++|++. ++++.
T Consensus 74 ~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~-~~~~~ 128 (156)
T 1bd8_A 74 DAARTGFLDTLKVLVEHG-ADVNVPDGTGALPIHLAV-----QEGHTAVVSFLAAE-SDLHR 128 (156)
T ss_dssp HHHHTTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHH-----HHTCHHHHHHHHTT-SCTTC
T ss_pred HHHHcCcHHHHHHHHHcC-CCCCCcCCCCCcHHHHHH-----HhChHHHHHHHHhc-cCCCC
Confidence 999999999999999999 999999999999999999 88899999999998 77665
No 73
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=7.2e-23 Score=174.04 Aligned_cols=111 Identities=20% Similarity=0.209 Sum_probs=103.6
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccC-CCCC
Q 043149 16 QGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKN-DEGN 94 (344)
Q Consensus 16 ~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d-~~G~ 94 (344)
.+.+|.||||+|+..|+.++++.|++ +.+++.+|..|+||||+|+.+|+.+++++|+++|.+ +|.+| .+|+
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------~~~~~~~~g~ 111 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD------LDHRDMRGGL 111 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------TTCCCSSSSC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCcCCCCCCC
Confidence 36789999999999999999999988 778899999999999999999999999999996544 66677 8899
Q ss_pred cHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHh
Q 043149 95 TLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVK 135 (344)
Q Consensus 95 TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~ 135 (344)
||||+|+..|+.+++++|+++| ++++.+|.+|+||+|+|+
T Consensus 112 tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~ 151 (183)
T 3deo_A 112 TALHMAAGYVRPEVVEALVELG-ADIEVEDERGLTALELAR 151 (183)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTSCCHHHHHH
T ss_pred CHHHHHHhcCcHHHHHHHHHcC-CCCcCCCCCCCCHHHHHH
Confidence 9999999999999999999999 999999999999999998
No 74
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.88 E-value=4.4e-22 Score=179.07 Aligned_cols=147 Identities=18% Similarity=0.167 Sum_probs=129.1
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
+|+.|++.+.+.-...+..|.||||+|+..|+.++++.|++. +..++..|..|.||||+|+..|+.+++++|+++|.+
T Consensus 20 ~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~- 97 (285)
T 1wdy_A 20 LVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH-GADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGAD- 97 (285)
T ss_dssp HHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-
T ss_pred HHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-
Confidence 367888888874334488999999999999999999888876 777888999999999999999999999999996543
Q ss_pred CccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccc----------cCCCCCHHHHHhhhcCCCccHHHHHHH
Q 043149 81 NMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINAR----------NSKDNTAMDMVKFHLQTKPEFEELKSM 150 (344)
Q Consensus 81 ~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~----------n~~G~Tpl~~a~~~~~~~~~~~~i~~~ 150 (344)
++..|..|+||||+|+..|+.+++++|++++ ++++.. +..|.||+|+|+ ..++.+++++
T Consensus 98 -----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~ 166 (285)
T 1wdy_A 98 -----VNECDFYGFTAFMEAAVYGKVKALKFLYKRG-ANVNLRRKTKEDQERLRKGGATALMDAA-----EKGHVEVLKI 166 (285)
T ss_dssp -----TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTT-CCTTCCCCCCHHHHHTTCCCCCHHHHHH-----HHTCHHHHHH
T ss_pred -----CCccCcccCCHHHHHHHhCCHHHHHHHHHhC-CCcccccccHHHHHhhccCCCcHHHHHH-----HcCCHHHHHH
Confidence 6778999999999999999999999999998 888877 788999999999 8888999999
Q ss_pred HHHc-CCCCCC
Q 043149 151 VRKA-GGRERS 160 (344)
Q Consensus 151 L~~~-ga~~~~ 160 (344)
|++. |++++.
T Consensus 167 Ll~~~~~~~~~ 177 (285)
T 1wdy_A 167 LLDEMGADVNA 177 (285)
T ss_dssp HHHTSCCCTTC
T ss_pred HHHhcCCCCCc
Confidence 9987 888776
No 75
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.88 E-value=1.4e-22 Score=168.06 Aligned_cols=127 Identities=14% Similarity=0.160 Sum_probs=116.8
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCCCcHH
Q 043149 18 REGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEGNTLL 97 (344)
Q Consensus 18 ~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~TpL 97 (344)
+...||||.|+..|+.++++.|++. +..++..|..|+||||+|+. |+.+++++|++.+. .++.+|..|+|||
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~------~~~~~~~~g~t~L 74 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQN-NVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGA------NPDLKDRTGFAVI 74 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTS-CCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTC------CTTCCCTTSCCHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhC-CCCccccCccCccHHHHHHc-CcHHHHHHHHHcCC------CCCCCCCCCCCHH
Confidence 4567999999999999999999875 67888999999999999999 99999999999654 3677899999999
Q ss_pred HHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCC
Q 043149 98 HISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRE 158 (344)
Q Consensus 98 H~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~ 158 (344)
|+|+..|+.+++++|++++ ++++.+|..|+||||+|+ ..++.+++++|+++|++.
T Consensus 75 ~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~ 129 (162)
T 1ihb_A 75 HDAARAGFLDTLQTLLEFQ-ADVNIEDNEGNLPLHLAA-----KEGHLRVVEFLVKHTASN 129 (162)
T ss_dssp HHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHHHSCCC
T ss_pred HHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHH-----HcCCHHHHHHHHHccCCC
Confidence 9999999999999999999 999999999999999999 888999999999999985
No 76
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.88 E-value=4.9e-23 Score=184.18 Aligned_cols=145 Identities=15% Similarity=0.162 Sum_probs=118.2
Q ss_pred cCCccccccC----CCCCcHHHHHH---HcCCHHHHHHHHHhCC----------CCcccccCCCChHHHHHHHcCCHHHH
Q 043149 8 FDRNLVRVQG----REGVTPLHYVA---EKGNVDLLCKFLAACP----------ESILQVTIRKETALHVAAKYDRLEVL 70 (344)
Q Consensus 8 ~~~~~~~~~d----~~G~TpLh~Aa---~~G~~~~v~~LL~~~~----------~~~~~~d~~G~t~Lh~A~~~g~~~iv 70 (344)
.+.+ ++..+ .+|.||||+|+ ..|+.++++.|++.+. ...+..|..|+||||+|+..|+.+++
T Consensus 31 ~~~~-~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v 109 (260)
T 3jxi_A 31 HKKR-LTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYV 109 (260)
T ss_dssp HTCC-TTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHH
T ss_pred cCCC-cchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHH
Confidence 5555 55444 77999999999 7799999999998632 23445566899999999999999999
Q ss_pred HHHHhchhccCccccccccC--------------CCCCcHHHHHHHCCcHHHHHHHHh---ccCcccccccCCCCCHHHH
Q 043149 71 ETMLGWLRYVNMDDILNWKN--------------DEGNTLLHISISRSHIQIVRLIVK---RVRDQINARNSKDNTAMDM 133 (344)
Q Consensus 71 ~~Ll~~~~~~~~~~~ln~~d--------------~~G~TpLH~Aa~~g~~~~v~~Ll~---~~~~~~~~~n~~G~Tpl~~ 133 (344)
++|+++|.+ ++.+| ..|+||||+|+..|+.+++++|++ .+ ++++.+|..|+||||+
T Consensus 110 ~~Ll~~ga~------~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g-a~~~~~d~~g~TpLh~ 182 (260)
T 3jxi_A 110 ELLVEKGAD------VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQ-ADLRRQDSRGNTVLHA 182 (260)
T ss_dssp HHHHHTTCC------TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC-CCTTCCCTTSCCHHHH
T ss_pred HHHHhCCCC------cCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC-CCCcccCCCCCcHHHH
Confidence 999997765 44455 689999999999999999999999 77 9999999999999999
Q ss_pred HhhhcCCCcc----HHHHHHHHHHcCCCCCC
Q 043149 134 VKFHLQTKPE----FEELKSMVRKAGGRERS 160 (344)
Q Consensus 134 a~~~~~~~~~----~~~i~~~L~~~ga~~~~ 160 (344)
|+........ ..+++++|+++|++++.
T Consensus 183 A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~ 213 (260)
T 3jxi_A 183 LVAIADNTRENTKFVTKMYDLLLIKCAKLFP 213 (260)
T ss_dssp HHHHCCSSHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHhccCchhHHHHHHHHHHHHHHhCccccc
Confidence 9932211111 15899999999998853
No 77
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.88 E-value=4.3e-22 Score=191.38 Aligned_cols=145 Identities=19% Similarity=0.237 Sum_probs=97.8
Q ss_pred HHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccC
Q 043149 2 VLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVN 81 (344)
Q Consensus 2 v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ 81 (344)
|+.|++.+.+ ++..|..|.||||+||..|+.++++.|++. +..++.+|..|+||||+|+..|+.+++++|+++|.+
T Consensus 30 v~~Ll~~g~~-~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-- 105 (437)
T 1n11_A 30 VKNLLQRGAS-PNVSNVKVETPLHMAARAGHTEVAKYLLQN-KAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNAN-- 105 (437)
T ss_dssp HHHHHHTTCC-SCCSSSCCCCHHHHHHHHTCHHHHHHHHHH-TCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC--
T ss_pred HHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCC--
Confidence 5667776555 667777777777777777777777777765 566677777777777777777777777777775543
Q ss_pred ccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 82 MDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 82 ~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
++..|..|.||||+|+..|+.+++++|++++ ++.+..+..|.||||+|+ ..++.+++++|+++|++++.
T Consensus 106 ----~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~g~t~L~~A~-----~~g~~~~v~~Ll~~g~~~~~ 174 (437)
T 1n11_A 106 ----PNLATTAGHTPLHIAAREGHVETVLALLEKE-ASQACMTKKGFTPLHVAA-----KYGKVRVAELLLERDAHPNA 174 (437)
T ss_dssp ----TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHH-----HTTCHHHHHHHHHTTCCTTC
T ss_pred ----CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCCcCCCCCCCCHHHHHH-----HcCCHHHHHHHHhCCCCCCC
Confidence 4445666666666666666666666666665 556666666666666666 55666666666666665554
No 78
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.88 E-value=8.9e-22 Score=182.52 Aligned_cols=150 Identities=18% Similarity=0.192 Sum_probs=124.5
Q ss_pred HHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccC
Q 043149 2 VLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVN 81 (344)
Q Consensus 2 v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ 81 (344)
|+.+|...+..++.+|..|.||||+|+..|+.++++.|++. +.+++..|..|+||||+|+..|+.+++++|++++.+
T Consensus 40 v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~-- 116 (351)
T 3utm_A 40 LMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQH-GADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGAC-- 116 (351)
T ss_dssp HHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC--
T ss_pred HHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCC--
Confidence 56777776777889999999999999999999999888886 778888999999999999999999999999996543
Q ss_pred ccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccC------------------------------------
Q 043149 82 MDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNS------------------------------------ 125 (344)
Q Consensus 82 ~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~------------------------------------ 125 (344)
++..|..|.||||+|+..|+.+++++|++++ ++++..|.
T Consensus 117 ----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (351)
T 3utm_A 117 ----VNAMDLWQFTPLHEAASKNRVEVCSLLLSHG-ADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADL 191 (351)
T ss_dssp ----TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred ----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccH
Confidence 6778999999999999999999999999998 88776654
Q ss_pred ------------------CCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCCC
Q 043149 126 ------------------KDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERSS 161 (344)
Q Consensus 126 ------------------~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~~ 161 (344)
.|.||+|+|+.. ...+..+++++|++.|++++..
T Consensus 192 ~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~--~~~~~~~~~~~Ll~~g~~~~~~ 243 (351)
T 3utm_A 192 AKVKKTLALEIINFKQPQSHETALHCAVAS--LHPKRKQVAELLLRKGANVNEK 243 (351)
T ss_dssp HHHHHHTTTCCTTCCCTTTCCCHHHHHHHC--CSTTHHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHHhhcccccCCCCCCCHHHHHHHH--hCccHHHHHHHHHHcCCCcCCc
Confidence 455666666621 0115678999999999888763
No 79
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.87 E-value=1.3e-21 Score=175.49 Aligned_cols=129 Identities=16% Similarity=0.135 Sum_probs=117.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCCCcHHH
Q 043149 19 EGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEGNTLLH 98 (344)
Q Consensus 19 ~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~TpLH 98 (344)
+|+||||+||..|+.++++.|++. +.+++.+|.+|+||||+|+..|+.+++++|+++|. .++.+|.+|+||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~------~~~~~~~~g~t~L~ 74 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQ-GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGA------QVNGVTADWHTPLF 74 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC------CTTCCCTTSCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC------CCCCCCCCCCCHHH
Confidence 699999999999999999999987 77899999999999999999999999999999654 47789999999999
Q ss_pred HHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCCC
Q 043149 99 ISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERSS 161 (344)
Q Consensus 99 ~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~~ 161 (344)
+|+..|+.+++++|++++ ++++. +.+|.||+|+|+ ..++.+++++|++.|++++..
T Consensus 75 ~A~~~~~~~~v~~Ll~~g-~~~~~-~~~g~t~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~ 130 (261)
T 2xai_A 75 NACVSGSWDCVNLLLQHG-ASVQP-ESDLASPIHEAA-----RRGHVECVNSLIAYGGNIDHK 130 (261)
T ss_dssp HHHHHTCHHHHHHHHHTT-CCSSC-SCTTCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHcCCHHHHHHHHHCC-CCCCC-CCCCCCHHHHHH-----HcCcHHHHHHHHHcCCCCCcC
Confidence 999999999999999999 88875 556999999999 888999999999999998763
No 80
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.87 E-value=2e-22 Score=190.52 Aligned_cols=134 Identities=16% Similarity=0.280 Sum_probs=99.2
Q ss_pred ccccCCCCCcHHHHHHHcC---CHHHHHHHHHhCCCCccc--------ccCCCChHHHHHHHcCCHHHHHHHHhchhccC
Q 043149 13 VRVQGREGVTPLHYVAEKG---NVDLLCKFLAACPESILQ--------VTIRKETALHVAAKYDRLEVLETMLGWLRYVN 81 (344)
Q Consensus 13 ~~~~d~~G~TpLh~Aa~~G---~~~~v~~LL~~~~~~~~~--------~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ 81 (344)
++..|..|.||||+|+..| +.++++.|++. +..++. .|..|+||||+|+..|+.+++++|++++
T Consensus 228 ~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~-g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~---- 302 (373)
T 2fo1_E 228 IEELDRNGMTALMIVAHNEGRDQVASAKLLVEK-GAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEK---- 302 (373)
T ss_dssp TSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHH-TCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHS----
T ss_pred hhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHC-CCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhc----
Confidence 4445555555555555554 45555555544 333332 3456666666666666666666666542
Q ss_pred ccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCC
Q 043149 82 MDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRE 158 (344)
Q Consensus 82 ~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~ 158 (344)
+..++.+|.+|+||||+|+..|+.+++++|+++| ++++.+|..|+||+|+|+ ..++.+++++|+++|++.
T Consensus 303 -~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g-ad~~~~d~~g~t~l~~A~-----~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 303 -GSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQG-ASVEAVDATDHTARQLAQ-----ANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp -CCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSSCCCSSSCCHHHHHH-----HTTCHHHHHHHHTTC---
T ss_pred -CCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccCCCCCCCCHHHHHH-----HcCCHHHHHHHHhcCccc
Confidence 2557889999999999999999999999999999 999999999999999999 889999999999998764
No 81
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.87 E-value=2.4e-21 Score=176.25 Aligned_cols=135 Identities=14% Similarity=0.116 Sum_probs=123.5
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCC
Q 043149 13 VRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDE 92 (344)
Q Consensus 13 ~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~ 92 (344)
.+.+|.+|+||||+||..|+.++++.|++. +..++.+|.+|+||||+|+..|+.+++++|++.+. .++.+|.+
T Consensus 52 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga------~~~~~~~~ 124 (285)
T 3d9h_A 52 LMGDAVSDWSPMHEAAIHGHQLSLRNLISQ-GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGA------QVNGVTAD 124 (285)
T ss_dssp TCSSSCCSCCHHHHHHHTTCHHHHHHHHHT-TCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTC------CSSCCCTT
T ss_pred ccCCCccCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCC------CCCCCCCC
Confidence 566899999999999999999999999986 67789999999999999999999999999999654 47789999
Q ss_pred CCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCCC
Q 043149 93 GNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERSS 161 (344)
Q Consensus 93 G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~~ 161 (344)
|+||||+|+..|+.+++++|++++ ++++..+ .|.||||+|+ ..++.+++++|++.|++++..
T Consensus 125 g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~-~g~t~L~~A~-----~~g~~~~v~~Ll~~g~~~~~~ 186 (285)
T 3d9h_A 125 WHTPLFNACVSGSWDCVNLLLQHG-ASVQPES-DLASPIHEAA-----RRGHVECVNSLIAYGGNIDHK 186 (285)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTT-CCSSCSC-TTSCHHHHHH-----HHTCHHHHHHHHHTTCCTTCC
T ss_pred CCCHHHHHHHcCHHHHHHHHHHCC-CCCCCCC-CCCCHHHHHH-----HcCCHHHHHHHHHCCCCCCCc
Confidence 999999999999999999999998 8887654 5999999999 889999999999999998763
No 82
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.87 E-value=1.5e-21 Score=171.30 Aligned_cols=147 Identities=16% Similarity=0.194 Sum_probs=112.2
Q ss_pred HHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccC
Q 043149 2 VLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVN 81 (344)
Q Consensus 2 v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~ 81 (344)
++.|++.+.+ ++.+|..|.||||+|+..|+.++++.|++.+.......+..|+||||+|+..|+.+++++|++.+.+
T Consensus 25 ~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~-- 101 (240)
T 3eu9_A 25 CRELVEAGYD-VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGAD-- 101 (240)
T ss_dssp HHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCC--
T ss_pred HHHHHHcCCC-cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCC--
Confidence 5677777665 7777888888888888888888888888775544444555688888888888888888888875433
Q ss_pred ccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccH-HHHHHHHHHcCCCCCC
Q 043149 82 MDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEF-EELKSMVRKAGGRERS 160 (344)
Q Consensus 82 ~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~-~~i~~~L~~~ga~~~~ 160 (344)
++.+|..|.||||+|+..|+.+++++|++++ ++++.+|..|.||+|+|+ ..++ .+++++|++.|++++.
T Consensus 102 ----~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~g~t~l~~a~-----~~~~~~~~~~~L~~~~~~~~~ 171 (240)
T 3eu9_A 102 ----PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKG-QDVDMMDQNGMTPLMWAA-----YRTHSVDPTRLLLTFNVSVNL 171 (240)
T ss_dssp ----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH-----HHCCSSTTHHHHHHTTCCTTC
T ss_pred ----CcccCCCCCCHHHHHHHcCHHHHHHHHHhcC-CCccccCCCCCcHHHHHH-----HhCChHHHHHHHHhcCCCcch
Confidence 5667788888888888888888888888887 788888888888888887 3333 5777888888888776
Q ss_pred C
Q 043149 161 S 161 (344)
Q Consensus 161 ~ 161 (344)
.
T Consensus 172 ~ 172 (240)
T 3eu9_A 172 G 172 (240)
T ss_dssp C
T ss_pred h
Confidence 3
No 83
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.87 E-value=7.8e-22 Score=179.66 Aligned_cols=140 Identities=27% Similarity=0.315 Sum_probs=118.8
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccc-----------------------------
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVT----------------------------- 51 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d----------------------------- 51 (344)
+|+.||+.+.+ ++.+|..|.||||+|+..|+.++++.|++. +.+++..|
T Consensus 88 ~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~ 165 (299)
T 1s70_B 88 MVKFLVENGAN-INQPDNEGWIPLHAAASCGYLDIAEYLISQ-GAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVD 165 (299)
T ss_dssp HHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCC
Confidence 46788887776 889999999999999999999999988876 44444333
Q ss_pred -------------------------------CCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCCCcHHHHH
Q 043149 52 -------------------------------IRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEGNTLLHIS 100 (344)
Q Consensus 52 -------------------------------~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~TpLH~A 100 (344)
..|.||||+|+.+|+.+++++|+++|. .+|.+|.+|+||||+|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~------d~~~~d~~g~tpL~~A 239 (299)
T 1s70_B 166 IEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARY------DVNIKDYDGWTPLHAA 239 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTC------CTTCCCTTCCCHHHHH
T ss_pred chhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCC------CCCCcCCCCCcHHHHH
Confidence 457899999999999999999999654 4778999999999999
Q ss_pred HHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHc
Q 043149 101 ISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKA 154 (344)
Q Consensus 101 a~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ 154 (344)
+..|+.+++++|+++| ++++.+|..|+||+|+|. +.....+.+++.+.
T Consensus 240 ~~~~~~~~v~~Ll~~g-ad~~~~d~~g~t~l~~A~-----~~~~~~l~~l~~~~ 287 (299)
T 1s70_B 240 AHWGKEEACRILVENL-CDMEAVNKVGQTAFDVAD-----EDILGYLEELQKKQ 287 (299)
T ss_dssp HHTTCHHHHHHHHHTT-CCTTCCCTTSCCTTTSCC-----SGGGHHHHHHHHHT
T ss_pred HhcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHH-----HHHHHHHHHHHHHH
Confidence 9999999999999999 999999999999999998 65555555555544
No 84
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.87 E-value=1.1e-22 Score=188.92 Aligned_cols=133 Identities=18% Similarity=0.118 Sum_probs=117.7
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCC---HHHHHHHHHhCCCCcccccCCCChHHHHHHH----cCCHHHHHHH
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGN---VDLLCKFLAACPESILQVTIRKETALHVAAK----YDRLEVLETM 73 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~---~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~----~g~~~iv~~L 73 (344)
+|+.||+.+.+ ++.+|.+|+||||+|+..|+ .++++.|++.....++.+|..|+||||+|+. .|+.+++++|
T Consensus 146 ~v~~Ll~~Gad-~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~L 224 (327)
T 1sw6_A 146 LVKHLVKHGSN-RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYY 224 (327)
T ss_dssp HHHHHHHTTCC-TTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHH
T ss_pred HHHHHHHcCCC-CCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHH
Confidence 47889998876 89999999999999999998 7888888888667889999999999999999 8999999999
Q ss_pred Hhchhc--------------------cCc-------------------cccccccCCCCCcHHHHHHHCCcHHHHHHHHh
Q 043149 74 LGWLRY--------------------VNM-------------------DDILNWKNDEGNTLLHISISRSHIQIVRLIVK 114 (344)
Q Consensus 74 l~~~~~--------------------~~~-------------------~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~ 114 (344)
++.+.. ++. ...+|.+|.+|+||||+|+..|+.+++++|++
T Consensus 225 l~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~ 304 (327)
T 1sw6_A 225 LDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLD 304 (327)
T ss_dssp HHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 987431 110 00488899999999999999999999999999
Q ss_pred ccCcccccccCCCCCHHHHHh
Q 043149 115 RVRDQINARNSKDNTAMDMVK 135 (344)
Q Consensus 115 ~~~~~~~~~n~~G~Tpl~~a~ 135 (344)
+| ++++.+|.+|+||||+|+
T Consensus 305 ~G-ad~~~~d~~G~TpL~~A~ 324 (327)
T 1sw6_A 305 YG-ADPFIANKSGLRPVDFGA 324 (327)
T ss_dssp TT-CCTTCCCTTSCCGGGGTC
T ss_pred cC-CCCcccCCCCCCHHHHHH
Confidence 99 999999999999999998
No 85
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.86 E-value=1.5e-21 Score=181.25 Aligned_cols=143 Identities=17% Similarity=0.158 Sum_probs=114.4
Q ss_pred HHHHHhcCCccccccCCCCCcHHHHHHHcCC---HHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchh
Q 043149 2 VLRLIDFDRNLVRVQGREGVTPLHYVAEKGN---VDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLR 78 (344)
Q Consensus 2 v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~---~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~ 78 (344)
|+.||++.+..++.+|..|.||+|.++..+. .+.+.++|.+.+.+++.+|..|+||||+|+..|+.++++.|++.
T Consensus 184 v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~-- 261 (337)
T 4g8k_A 184 LKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ-- 261 (337)
T ss_dssp HHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTS--
T ss_pred HHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHh--
Confidence 5667766555577778888888877765543 33333334444777888888999999999999999999999874
Q ss_pred ccCccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCC
Q 043149 79 YVNMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRE 158 (344)
Q Consensus 79 ~~~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~ 158 (344)
.+..+|.+|.+|+||||+|+..|+.+++++|+++| +++|. .+||++|+ ..++.+++++|+++||++
T Consensus 262 ---~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G-Ad~n~-----~~~L~~A~-----~~~~~~iv~~Ll~~GA~~ 327 (337)
T 4g8k_A 262 ---EHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG-ASTDC-----GDLVMTAR-----RNYDHSLVKVLLSHGAKE 327 (337)
T ss_dssp ---TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTS-CSSTT-----CCHHHHHH-----HTTCHHHHHHHHHTTCCC
T ss_pred ---cCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCC-----CCHHHHHH-----HcCCHHHHHHHHHCcCCC
Confidence 23558899999999999999999999999999999 88875 46999999 888999999999999998
Q ss_pred CC
Q 043149 159 RS 160 (344)
Q Consensus 159 ~~ 160 (344)
+.
T Consensus 328 d~ 329 (337)
T 4g8k_A 328 DF 329 (337)
T ss_dssp --
T ss_pred CC
Confidence 86
No 86
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.86 E-value=3.7e-22 Score=176.92 Aligned_cols=131 Identities=15% Similarity=0.096 Sum_probs=90.6
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCCCcH
Q 043149 17 GREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEGNTL 96 (344)
Q Consensus 17 d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~Tp 96 (344)
+..|.||||.|+..|+.+.++.|+++ +..++. +..|.||||.|+..|+.+++++|++.+. .+|.+|.+|+||
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~-g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~------~~~~~d~~g~t~ 73 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAH-GMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVD------DPSLPNDEGITA 73 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTS------SCCCCCTTSCCH
T ss_pred CccccccCchhhhhhhHHHHHHHhcc-CCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCC------CCCCcCCCCCCH
Confidence 45799999999999999999998886 666664 4789999999999999999999998654 478899999999
Q ss_pred HHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCCC
Q 043149 97 LHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERSS 161 (344)
Q Consensus 97 LH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~~ 161 (344)
||+|+..|+.+++++|++++ +++|.+|..|+||||+|+ ..++.+++++|+++|++++..
T Consensus 74 L~~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpL~~A~-----~~~~~~~v~~Ll~~ga~~~~~ 132 (239)
T 1ycs_B 74 LHNAVCAGHTEIVKFLVQFG-VNVNAADSDGWTPLHCAA-----SCNNVQVCKFLVESGAAVFAM 132 (239)
T ss_dssp HHHHHHHTCHHHHHHHHHHT-CCTTCCCTTCCCHHHHHH-----HTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCccee
Confidence 99999999999999999999 999999999999999999 889999999999999998863
No 87
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.86 E-value=4.8e-22 Score=176.97 Aligned_cols=133 Identities=19% Similarity=0.182 Sum_probs=115.8
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccC-CCCC
Q 043149 16 QGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKN-DEGN 94 (344)
Q Consensus 16 ~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d-~~G~ 94 (344)
.+.+|.||||+|+..|+.++++.|+. +.+++.+|..|+||||+|+.+|+.+++++|+++|.+ +|.+| ..|+
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------~~~~~~~~g~ 112 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD------LDHRDMRGGL 112 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC------TTCCCSSSCC
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC------CCcCCCCCCC
Confidence 34689999999999999999998888 678899999999999999999999999999996654 66677 7899
Q ss_pred cHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCC-----------CccHHHHHHHHHHcCCC
Q 043149 95 TLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQT-----------KPEFEELKSMVRKAGGR 157 (344)
Q Consensus 95 TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~-----------~~~~~~i~~~L~~~ga~ 157 (344)
||||+|+..|+.+++++|+++| ++++.+|..|+||+|+|+...+. ..++.+++++|.+++.+
T Consensus 113 t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 113 TALHMAAGYVRPEVVEALVELG-ADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred CHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 9999999999999999999999 99999999999999999832211 23577888888886444
No 88
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.86 E-value=4.3e-22 Score=164.74 Aligned_cols=125 Identities=15% Similarity=0.105 Sum_probs=97.7
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCCh-HHHHHHHcCCHHHHHHHHhchhc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKET-ALHVAAKYDRLEVLETMLGWLRY 79 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t-~Lh~A~~~g~~~iv~~Ll~~~~~ 79 (344)
+|+.|++.+.+ ++.+|..|.||||+|+ .|+.++++.|++. +.+++.+|..|+| |||+|+..|+.+++++|+++|.+
T Consensus 27 ~v~~Ll~~g~~-~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~-g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~ 103 (156)
T 1bi7_B 27 EVRALLEAGAN-PNAPNSYGRRPIQVMM-MGSARVAELLLLH-GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGAR 103 (156)
T ss_dssp HHHHHHTTTCC-TTCCCSSSCCTTTSSC-TTCHHHHHHHHTT-TCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC
T ss_pred HHHHHHHcCCC-CCCCCCCCCCHHHHHH-cCCHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCC
Confidence 36788888766 8999999999999985 9999999888876 7889999999999 99999999999999999996544
Q ss_pred cCccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHh
Q 043149 80 VNMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVK 135 (344)
Q Consensus 80 ~~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~ 135 (344)
++.+|.+|+||||+|+..|+.+++++|+++| ++++.+|..|.||.+-+.
T Consensus 104 ------~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~~~~~~ 152 (156)
T 1bi7_B 104 ------LDVRDAWGRLPVDLAEELGHRDVARYLRAAA-GGTRGSNHARIDAAEGPS 152 (156)
T ss_dssp ------SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-------------------
T ss_pred ------CcccCCCCCCHHHHHHHhCHHHHHHHHHHcC-CCCCccCcCcCcccccCC
Confidence 7789999999999999999999999999999 999999999999987543
No 89
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=1.4e-20 Score=170.96 Aligned_cols=129 Identities=18% Similarity=0.233 Sum_probs=115.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCCC-----cccccCCCChHHHHHHHc---CCHHHHHHHHhchhccCccccccccCC
Q 043149 20 GVTPLHYVAEKGNVDLLCKFLAACPES-----ILQVTIRKETALHVAAKY---DRLEVLETMLGWLRYVNMDDILNWKND 91 (344)
Q Consensus 20 G~TpLh~Aa~~G~~~~v~~LL~~~~~~-----~~~~d~~G~t~Lh~A~~~---g~~~iv~~Ll~~~~~~~~~~~ln~~d~ 91 (344)
..++||.|+..|+.+.++.++..+.+. ++..|..|+||||+|+.. |+.+++++|+++|.+ +|.+|.
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~------in~~d~ 203 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN------LDKQTG 203 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC------TTCCCT
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC------ccccCC
Confidence 457999999999999999888874432 444588999999999999 899999999996544 788999
Q ss_pred CCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 92 EGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 92 ~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
+|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+ ..++.+++++|+++|++...
T Consensus 204 ~g~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~-----~~~~~~~v~~Ll~~ga~~~~ 266 (278)
T 1dcq_A 204 KGSTALHYCCLTDNAECLKLLLRGK-ASIEIANESGETPLDIAK-----RLKHEHCEELLTQALSGRFN 266 (278)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHHHHTTCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCccCCCCCHHHHHH-----HcCCHHHHHHHHHcCCCCCC
Confidence 9999999999999999999999999 999999999999999999 88999999999999987554
No 90
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.84 E-value=3.6e-21 Score=150.63 Aligned_cols=110 Identities=26% Similarity=0.360 Sum_probs=98.4
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCC
Q 043149 14 RVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEG 93 (344)
Q Consensus 14 ~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G 93 (344)
..+|++|.||||+|+..|+.++++.|++. +..++..|..|+||||+|+..++.+++++|++++. .++.+|.+|
T Consensus 3 ~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~------~~~~~d~~g 75 (115)
T 2l6b_A 3 MWGSKDGNTPLHNAAKNGHAEEVKKLLSK-GADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGA------DVNARSKDG 75 (115)
T ss_dssp -CCSCSSCCHHHHHHHHTCHHHHHHHTTT-TCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTC------CTTCCCTTC
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC------CCcccCCCC
Confidence 35789999999999999999999888876 67788999999999999999999999999999654 377889999
Q ss_pred CcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHH
Q 043149 94 NTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAM 131 (344)
Q Consensus 94 ~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl 131 (344)
+||||+|+..|+.+++++|+++| +++|.++..|.||-
T Consensus 76 ~tpl~~A~~~~~~~~~~~Ll~~g-a~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 76 NTPEHLAKKNGHHEIVKLLDAKG-ADVNARSWGSSHHH 112 (115)
T ss_dssp CCTTHHHHTTTCHHHHHHHHTTS-SSHHHHSCCCC---
T ss_pred CCHHHHHHHCCCHHHHHHHHHcC-CCCCcCCccccccc
Confidence 99999999999999999999999 99999999999885
No 91
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.84 E-value=1.7e-20 Score=141.27 Aligned_cols=91 Identities=30% Similarity=0.467 Sum_probs=56.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCCCcHHH
Q 043149 19 EGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEGNTLLH 98 (344)
Q Consensus 19 ~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~TpLH 98 (344)
+|+||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|+++|.+ ++.+|.+|+||||
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------~~~~d~~g~t~l~ 73 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD------VNAKDKNGRTPLH 73 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCccCCCCCCHHH
Confidence 366666666666666666665554 555666666666666666666666666666664332 4556666666666
Q ss_pred HHHHCCcHHHHHHHHhcc
Q 043149 99 ISISRSHIQIVRLIVKRV 116 (344)
Q Consensus 99 ~Aa~~g~~~~v~~Ll~~~ 116 (344)
+|+..|+.+++++|+++|
T Consensus 74 ~A~~~~~~~~~~~Ll~~g 91 (93)
T 1n0q_A 74 LAARNGHLEVVKLLLEAG 91 (93)
T ss_dssp HHHHTTCHHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHcC
Confidence 666666666666666655
No 92
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=1.1e-20 Score=185.17 Aligned_cols=128 Identities=20% Similarity=0.221 Sum_probs=114.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCCCcccc------cCCCChHHHHHHH---cCCHHHHHHHHhchhccCccccccccC
Q 043149 20 GVTPLHYVAEKGNVDLLCKFLAACPESILQV------TIRKETALHVAAK---YDRLEVLETMLGWLRYVNMDDILNWKN 90 (344)
Q Consensus 20 G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~------d~~G~t~Lh~A~~---~g~~~iv~~Ll~~~~~~~~~~~ln~~d 90 (344)
..+.||.|+..|+.+.++.||.. +.+++.. |..|+||||+||. .|+.+++++|+++|++ +|.+|
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~-g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~------vn~~d 204 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH------LDAKA 204 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHT-TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC------TTCCC
T ss_pred cHHHHHHHHhccCHHHHHHHHhh-cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC------CCccC
Confidence 34789999999999999999987 5677666 8899999999977 8999999999996644 78899
Q ss_pred CCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 91 DEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 91 ~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
.+|+||||+|+..|+.+++++|+++| ++++.+|.+|+||||+|+ ..++.+++++|+++|++++.
T Consensus 205 ~~g~TpLh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~-----~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 205 ADGNTALHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALDIAR-----KKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp SSSCCHHHHHTTTTCHHHHHHHHHTC-CCCSCCCTTCCCHHHHHH-----HTTCHHHHHHHHHTCC----
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHH-----HcCCHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999 999999999999999999 88999999999999999887
No 93
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.83 E-value=2.4e-20 Score=140.45 Aligned_cols=93 Identities=26% Similarity=0.432 Sum_probs=86.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHH
Q 043149 53 RKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMD 132 (344)
Q Consensus 53 ~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~ 132 (344)
+|+||||+|+..|+.+++++|++.+. .+|.+|.+|+||||+|+..|+.+++++|++++ ++++.+|..|+||+|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~t~l~ 73 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGA------DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLH 73 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCC------CCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHH
Confidence 48999999999999999999999654 47889999999999999999999999999999 999999999999999
Q ss_pred HHhhhcCCCccHHHHHHHHHHcCCC
Q 043149 133 MVKFHLQTKPEFEELKSMVRKAGGR 157 (344)
Q Consensus 133 ~a~~~~~~~~~~~~i~~~L~~~ga~ 157 (344)
+|+ ..++.+++++|+++|++
T Consensus 74 ~A~-----~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 74 LAA-----RNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHH-----HTTCHHHHHHHHHTTCC
T ss_pred HHH-----HcCCHHHHHHHHHcCCC
Confidence 999 88899999999999985
No 94
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.83 E-value=3.4e-20 Score=149.63 Aligned_cols=108 Identities=24% Similarity=0.293 Sum_probs=97.9
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
+|+.|++.+.+ ++.+|..|.||||+|+..|+.++++.|++. +.+++..|..|.||||+|+..|+.+++++|+++|.+
T Consensus 29 ~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~- 105 (136)
T 2jab_A 29 EVRILMANGAD-VNAKDEYGLTPLYLATAHGHLEIVEVLLKN-GADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGAD- 105 (136)
T ss_dssp HHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-
T ss_pred HHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-
Confidence 36788888776 889999999999999999999999988876 788899999999999999999999999999996543
Q ss_pred CccccccccCCCCCcHHHHHHHCCcHHHHHHHHhcc
Q 043149 81 NMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRV 116 (344)
Q Consensus 81 ~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~ 116 (344)
++.+|.+|+||||+|+..|+.+++++|++.|
T Consensus 106 -----~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 106 -----VNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp -----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred -----CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 6789999999999999999999999999875
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.83 E-value=1.6e-20 Score=172.48 Aligned_cols=128 Identities=20% Similarity=0.224 Sum_probs=115.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCccc------ccCCCChHHHHHHHc---CCHHHHHHHHhchhccCcccccccc
Q 043149 19 EGVTPLHYVAEKGNVDLLCKFLAACPESILQ------VTIRKETALHVAAKY---DRLEVLETMLGWLRYVNMDDILNWK 89 (344)
Q Consensus 19 ~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~------~d~~G~t~Lh~A~~~---g~~~iv~~Ll~~~~~~~~~~~ln~~ 89 (344)
.+.++||.|+..|+.+.++.|+.. +.+++. .|..|+||||+|+.. ++.+++++|+++|.+ +|.+
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~-g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad------vn~~ 222 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH------LDAK 222 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHT-TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC------TTCC
T ss_pred chHHHHhhhhhccCHHHHHHHHhc-CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC------CCCC
Confidence 345789999999999999999876 566665 688999999999997 899999999996544 7889
Q ss_pred CCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCC
Q 043149 90 NDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRER 159 (344)
Q Consensus 90 d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~ 159 (344)
|.+|+||||+|+..|+.+++++|+++| ++++.+|.+|+||||+|+ ..++.+++++|+++|++..
T Consensus 223 d~~G~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~G~TpL~~A~-----~~~~~~iv~~Ll~~ga~~g 286 (301)
T 2b0o_E 223 AADGNTALHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALDIAR-----KKHHKECEELLEQAQAGTF 286 (301)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTT-CCCSCCCTTSCCHHHHHH-----HHTCHHHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHH-----HcCCHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999 999999999999999999 8889999999999987643
No 96
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.83 E-value=1.9e-20 Score=176.46 Aligned_cols=131 Identities=19% Similarity=0.174 Sum_probs=116.6
Q ss_pred cCCCCCcHHHHHHHc-CCHHHHHHHHHhCCCCccccc--CCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCC
Q 043149 16 QGREGVTPLHYVAEK-GNVDLLCKFLAACPESILQVT--IRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDE 92 (344)
Q Consensus 16 ~d~~G~TpLh~Aa~~-G~~~~v~~LL~~~~~~~~~~d--~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~ 92 (344)
.+..+.|+||.|+.. |+.++++.|+.. +.+++..| ..|+||||+|+..|+.+++++|+++|. .+|.+|..
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~-Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Ga------dvn~~d~~ 267 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAH-GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGA------NVNQADSA 267 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHT-TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTT
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHc-CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCC------CCCCCCCC
Confidence 344567899999999 999999999876 77888888 889999999999999999999999654 47889999
Q ss_pred CCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCCCC
Q 043149 93 GNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGRER 159 (344)
Q Consensus 93 G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~ 159 (344)
|+||||+|+..|+.+++++|+++| ++++.+|.+|.||||+|+ ..++.+++++|++++....
T Consensus 268 G~TpLh~A~~~g~~~~v~~LL~~G-ad~~~~d~~G~TpL~~A~-----~~g~~~iv~lLl~~~~~~~ 328 (368)
T 3jue_A 268 GRGPLHHATILGHTGLACLFLKRG-ADLGARDSEGRDPLTIAM-----ETANADIVTLLRLAKMREA 328 (368)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH-----HTTCHHHHHHHHHHHC---
T ss_pred CCCHHHHHHHcCcHHHHHHHHHCc-CCCCCcCCCCCCHHHHHH-----HCCCHHHHHHHHHcCCCcc
Confidence 999999999999999999999999 999999999999999999 8889999999998875543
No 97
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.82 E-value=4.4e-21 Score=169.29 Aligned_cols=142 Identities=13% Similarity=0.073 Sum_probs=121.5
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
+|+.||+.+.+ ++.+|.+|.||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|+++|.+
T Consensus 36 ~v~~Ll~~g~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~- 112 (229)
T 2vge_A 36 VVQQAVKEMND-PSQPNEEGITALHNAICGANYSIVDFLITA-GANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAA- 112 (229)
T ss_dssp HHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-
T ss_pred HHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-
Confidence 47888988876 899999999999999999999999988876 788999999999999999999999999999997654
Q ss_pred CccccccccC-CCCCcHHHHH--HHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCCC
Q 043149 81 NMDDILNWKN-DEGNTLLHIS--ISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGGR 157 (344)
Q Consensus 81 ~~~~~ln~~d-~~G~TpLH~A--a~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~ 157 (344)
++.+| .+|+||||+| +..|+.+++++|++.| ++++.+|..|.||++.+. ... ..++|++.|++
T Consensus 113 -----~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~g-a~~~~~~~~~~~~l~~~~-----~~~---~~~~ll~~ga~ 178 (229)
T 2vge_A 113 -----IFATTLSDGATAFEKCDPYREGYADCATYLADVE-QSMGLMNSGAVYALWDYS-----AEF---GDELSFREGES 178 (229)
T ss_dssp -----TTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHH-HHTTTSGGGEEEESSCBC-----CSS---TTBCCBCTTCE
T ss_pred -----cccccCCCCCCHHHHHHHHhcChHHHHHHHHHcC-CCcccccCCchHHHHHHh-----hcc---ccccCcccccc
Confidence 56676 6999999999 9999999999999999 899999888888887555 211 22466677776
Q ss_pred CC
Q 043149 158 ER 159 (344)
Q Consensus 158 ~~ 159 (344)
.+
T Consensus 179 ~~ 180 (229)
T 2vge_A 179 VT 180 (229)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 98
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.82 E-value=1.9e-20 Score=160.02 Aligned_cols=133 Identities=10% Similarity=0.061 Sum_probs=112.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCccccc-CCCChHHHHHHHcCCH----HHHHHHHhchhccCccccccccCCCC
Q 043149 19 EGVTPLHYVAEKGNVDLLCKFLAACPESILQVT-IRKETALHVAAKYDRL----EVLETMLGWLRYVNMDDILNWKNDEG 93 (344)
Q Consensus 19 ~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d-~~G~t~Lh~A~~~g~~----~iv~~Ll~~~~~~~~~~~ln~~d~~G 93 (344)
.+.++||.||+.|+.+.++.++.... +..+ ..|+||||+|+.+++. +++++|++.|++ +|.+|.+|
T Consensus 5 ~~~~~l~~Aa~~g~~~~~~~l~~~~~---~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad------vn~~d~~g 75 (186)
T 3t8k_A 5 SEYRTVSAAAMLGTYEDFLELFEKGY---EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD------IKSRTKEG 75 (186)
T ss_dssp HHCSSHHHHHHHSCHHHHHHHHHHSS---SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC------SSCCCTTC
T ss_pred ccccHHHHHHHcCCHHHHHHHHhcCc---ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC------CCCCCCCC
Confidence 36789999999999999999988643 3444 7799999999999975 599999996654 78899999
Q ss_pred CcHHHHHHHCCc------HHHHHHHHhccCcccccccCCCC-CHHHHHhhhcCCCccHHHHHHHHHH-cCCCCCCC
Q 043149 94 NTLLHISISRSH------IQIVRLIVKRVRDQINARNSKDN-TAMDMVKFHLQTKPEFEELKSMVRK-AGGRERSS 161 (344)
Q Consensus 94 ~TpLH~Aa~~g~------~~~v~~Ll~~~~~~~~~~n~~G~-Tpl~~a~~~~~~~~~~~~i~~~L~~-~ga~~~~~ 161 (344)
+||||+|+..|+ .+++++|+++| +++|.+|..|+ ||||+|+.......+..+++++|++ +|++++..
T Consensus 76 ~TpLh~a~~~~~~~~~~~~~iv~~Ll~~G-adin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~ 150 (186)
T 3t8k_A 76 TTLFFPLFQGGGNDITGTTELCKIFLEKG-ADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIK 150 (186)
T ss_dssp CCTHHHHHHHCTTCHHHHHHHHHHHHHTT-CCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCC
T ss_pred CcHHHHHHHcCCcchhhHHHHHHHHHHCC-CCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCccc
Confidence 999999999886 58899999999 99999999999 9999999321122456789999999 99999874
No 99
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.82 E-value=2.3e-20 Score=150.65 Aligned_cols=109 Identities=16% Similarity=0.131 Sum_probs=99.1
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCC-CChHHHHHHHcCCHHHHHHHHhchhc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIR-KETALHVAAKYDRLEVLETMLGWLRY 79 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~-G~t~Lh~A~~~g~~~iv~~Ll~~~~~ 79 (344)
+|+.|++.+.+ ++.+|..|.||||+|+. |+.++++.|++. +.+++.+|.. |+||||+|+..|+.+++++|++++.
T Consensus 27 ~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga- 102 (136)
T 1d9s_A 27 TVRQLLEAGAD-PNALNRFGRRPIQVMMM-GSAQVAELLLLH-GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGA- 102 (136)
T ss_dssp HHHHHHHTTCC-TTCCCTTCCTTTTTSTT-SCHHHHHHHHHH-TCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCC-
T ss_pred HHHHHHHcCCC-cCCcCCCCCCHHHHHHc-CCHHHHHHHHHC-CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-
Confidence 46788888766 88999999999999999 999999999987 7788999999 9999999999999999999999654
Q ss_pred cCccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcc
Q 043149 80 VNMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQ 119 (344)
Q Consensus 80 ~~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~ 119 (344)
.++.+|..|+||||+|+..|+.+++++|+++| ++
T Consensus 103 -----~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~G-ad 136 (136)
T 1d9s_A 103 -----RLDVCDAWGRLPVDLAEEQGHRDIARYLHAAT-GD 136 (136)
T ss_dssp -----CCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHH-CC
T ss_pred -----CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CC
Confidence 47789999999999999999999999999988 53
No 100
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.81 E-value=5.6e-20 Score=168.89 Aligned_cols=119 Identities=18% Similarity=0.165 Sum_probs=104.4
Q ss_pred HHHHHhcCCccccc------cCCCCCcHHHHHHHc---CCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHH
Q 043149 2 VLRLIDFDRNLVRV------QGREGVTPLHYVAEK---GNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLET 72 (344)
Q Consensus 2 v~~LL~~~~~~~~~------~d~~G~TpLh~Aa~~---G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~ 72 (344)
|+.||+.+.+ ++. .|..|.||||+|+.. |+.++++.|++. +.+++.+|.+|+||||+|+..|+.+++++
T Consensus 167 v~~ll~~g~d-~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~-gadvn~~d~~G~TpLh~A~~~g~~~~v~~ 244 (301)
T 2b0o_E 167 VLEAFANGQD-FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGNTALHYAALYNQPDCLKL 244 (301)
T ss_dssp HHHHHHTTCC-TTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHH-SSCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHhcCCc-ccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 5678877777 555 689999999999997 899999999987 78899999999999999999999999999
Q ss_pred HHhchhccCccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHh
Q 043149 73 MLGWLRYVNMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVK 135 (344)
Q Consensus 73 Ll~~~~~~~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~ 135 (344)
|+++|++ ++.+|.+|+||||+|+..|+.+++++|++++ ++ .|.||||+|+
T Consensus 245 Ll~~gad------~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~g-a~------~g~tpLh~A~ 294 (301)
T 2b0o_E 245 LLKGRAL------VGTVNEAGETALDIARKKHHKECEELLEQAQ-AG------TFAFPLHVDY 294 (301)
T ss_dssp HHHTTCC------CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHH-HH------TTSSCCC---
T ss_pred HHHcCCC------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhc-CC------CCCChhHHHH
Confidence 9996554 6789999999999999999999999999998 54 6899999999
No 101
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.80 E-value=3e-19 Score=140.94 Aligned_cols=110 Identities=27% Similarity=0.434 Sum_probs=99.6
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
+++.|++.+.+ ++..|..|.||||+|+..|+.++++.|++. +..++.+|..|+||||+|+..|+.+++++|++++.+
T Consensus 17 ~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~- 93 (126)
T 1n0r_A 17 VVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD- 93 (126)
T ss_dssp HHHHHHHHTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-
T ss_pred HHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCcHHHHHHHHHc-CCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCC-
Confidence 36788888776 888999999999999999999999888876 778889999999999999999999999999996543
Q ss_pred CccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcc
Q 043149 81 NMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQ 119 (344)
Q Consensus 81 ~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~ 119 (344)
++.+|.+|+||||+|+..|+.+++++|+++| ++
T Consensus 94 -----~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G-ad 126 (126)
T 1n0r_A 94 -----VNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-AY 126 (126)
T ss_dssp -----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-CC
T ss_pred -----CcccCCCCCCHHHHHHHcCcHHHHHHHHHcC-CC
Confidence 6778999999999999999999999999998 53
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.78 E-value=1.1e-19 Score=158.81 Aligned_cols=120 Identities=16% Similarity=0.141 Sum_probs=95.1
Q ss_pred CHHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 1 MVLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 1 ~v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
+|+.||+.+.+ ++.+|..|+||||+||..|+.++++.|++..+..++.+|..|+||||+|+..|+.+++++|+++|.+
T Consensus 88 ~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~- 165 (222)
T 3ehr_A 88 WLRECLDNRVG-VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGAR- 165 (222)
T ss_dssp HHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-
T ss_pred HHHHHHhCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-
Confidence 36788887776 8899999999999999999999999999877889999999999999999999999999999997554
Q ss_pred CccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCC
Q 043149 81 NMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDN 128 (344)
Q Consensus 81 ~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~ 128 (344)
++.+|.+|+||||+|+..|+.++++.|++.+ +..+..|.+|.
T Consensus 166 -----~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~-~~~~~~~~~~~ 207 (222)
T 3ehr_A 166 -----TDLRNIEKKLAFDMATNAACASLLKKKQGTD-AVRTLSNAEDY 207 (222)
T ss_dssp -----SCCCCTTSCCHHHHCCSHHHHHHHC------------------
T ss_pred -----CccccCCCCCHHHHhcchhHHHHHHHHhccc-hhhhccchhhh
Confidence 6789999999999999999999999999998 77777776654
No 103
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.77 E-value=1.7e-18 Score=139.53 Aligned_cols=101 Identities=20% Similarity=0.270 Sum_probs=94.3
Q ss_pred cccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCC
Q 043149 49 QVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDN 128 (344)
Q Consensus 49 ~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~ 128 (344)
.+|.+|+||||+|+..|+.+++++|++.+. .++.+|..|+||||+|+..|+.+++++|++++ ++++.+|..|+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~------~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~ 77 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGS------DPNVKDHAGWTPLHEACNHGHLKVVELLLQHK-ALVNTTGYQND 77 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTC------CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCGGGC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CcccCcCCCCC
Confidence 578899999999999999999999999654 46789999999999999999999999999999 99999999999
Q ss_pred CHHHHHhhhcCCCccHHHHHHHHHHcCCCCCCC
Q 043149 129 TAMDMVKFHLQTKPEFEELKSMVRKAGGRERSS 161 (344)
Q Consensus 129 Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~~ 161 (344)
||||+|+ ..++.+++++|+++|++++..
T Consensus 78 t~L~~A~-----~~~~~~~v~~Ll~~ga~~~~~ 105 (137)
T 3c5r_A 78 SPLHDAA-----KNGHVDIVKLLLSYGASRNAV 105 (137)
T ss_dssp CHHHHHH-----HTTCHHHHHHHHHTTCCTTCC
T ss_pred CHHHHHH-----HcCCHHHHHHHHHcCCCCCCC
Confidence 9999999 888999999999999998763
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.77 E-value=1.3e-18 Score=157.95 Aligned_cols=108 Identities=19% Similarity=0.210 Sum_probs=96.5
Q ss_pred HHHHHhcCCcc-----ccccCCCCCcHHHHHHHc---CCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHH
Q 043149 2 VLRLIDFDRNL-----VRVQGREGVTPLHYVAEK---GNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETM 73 (344)
Q Consensus 2 v~~LL~~~~~~-----~~~~d~~G~TpLh~Aa~~---G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~L 73 (344)
++.+++.+.+. ++..|..|.||||+|+.. |+.++++.|++. +.+++.+|..|+||||+|+.+|+.+++++|
T Consensus 146 ~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~-ga~in~~d~~g~TpLh~A~~~g~~~~v~~L 224 (278)
T 1dcq_A 146 LLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN-SGNLDKQTGKGSTALHYCCLTDNAECLKLL 224 (278)
T ss_dssp HHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH-CSCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHC-CCCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 45567777664 444589999999999999 999999998887 788999999999999999999999999999
Q ss_pred HhchhccCccccccccCCCCCcHHHHHHHCCcHHHHHHHHhcc
Q 043149 74 LGWLRYVNMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRV 116 (344)
Q Consensus 74 l~~~~~~~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~ 116 (344)
+++|++ ++.+|.+|.||||+|+..|+.+++++|++++
T Consensus 225 l~~gad------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 261 (278)
T 1dcq_A 225 LRGKAS------IEIANESGETPLDIAKRLKHEHCEELLTQAL 261 (278)
T ss_dssp HHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHcCCC------CCCccCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 996654 7889999999999999999999999999998
No 105
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.77 E-value=7.6e-19 Score=137.29 Aligned_cols=100 Identities=27% Similarity=0.371 Sum_probs=93.7
Q ss_pred cccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCC
Q 043149 49 QVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDN 128 (344)
Q Consensus 49 ~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~ 128 (344)
.+|.+|+||||+|+..|+.+++++|++.+. .++.+|..|+||||+|+..|+.+++++|++++ ++++.+|..|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~------~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~ 76 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGA------DVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG-ADVNARSKDGN 76 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTC------CSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTT-CCTTCCCTTCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCC
Confidence 578899999999999999999999999654 37789999999999999999999999999999 99999999999
Q ss_pred CHHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 129 TAMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 129 Tpl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
||||+|+ ..++.+++++|+++|++++.
T Consensus 77 tpl~~A~-----~~~~~~~~~~Ll~~ga~~n~ 103 (115)
T 2l6b_A 77 TPEHLAK-----KNGHHEIVKLLDAKGADVNA 103 (115)
T ss_dssp CTTHHHH-----TTTCHHHHHHHHTTSSSHHH
T ss_pred CHHHHHH-----HCCCHHHHHHHHHcCCCCCc
Confidence 9999999 88999999999999999876
No 106
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.76 E-value=1.6e-18 Score=169.96 Aligned_cols=116 Identities=19% Similarity=0.178 Sum_probs=98.8
Q ss_pred HHHHHhcCCcccccc------CCCCCcHHHHHHH---cCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHH
Q 043149 2 VLRLIDFDRNLVRVQ------GREGVTPLHYVAE---KGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLET 72 (344)
Q Consensus 2 v~~LL~~~~~~~~~~------d~~G~TpLh~Aa~---~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~ 72 (344)
|+.||+.+.+ ++.+ |..|.||||+|+. .|+.++++.||+. +.+++.+|.+|+||||+|+.+|+.+++++
T Consensus 148 v~~ll~~g~~-~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~-ga~vn~~d~~g~TpLh~A~~~g~~~~v~~ 225 (497)
T 3lvq_E 148 VLEAFANGQD-FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGNTALHYAALYNQPDCLKL 225 (497)
T ss_dssp HHHHHHTTCC-SSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH-SCCTTCCCSSSCCHHHHHTTTTCHHHHHH
T ss_pred HHHHHhhccc-ccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHc-CCCCCccCCCCCcHHHHHHHcCCHHHHHH
Confidence 6788888876 6655 8899999999966 8999999999887 78899999999999999999999999999
Q ss_pred HHhchhccCccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCC
Q 043149 73 MLGWLRYVNMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSK 126 (344)
Q Consensus 73 Ll~~~~~~~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~ 126 (344)
|+++|++ ++.+|.+|+||||+|+..|+.+++++|+++| ++++..+.+
T Consensus 226 Ll~~ga~------~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~g-a~~~~~~~h 272 (497)
T 3lvq_E 226 LLKGRAL------VGTVNEAGETALDIARKKHHKECEELLEQAQ-AGTFAFPLH 272 (497)
T ss_dssp HHHTCCC------CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTC-C--------
T ss_pred HHHcCCC------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhC-CCCCCCcce
Confidence 9996554 7889999999999999999999999999999 888774333
No 107
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.76 E-value=2.6e-18 Score=161.87 Aligned_cols=126 Identities=17% Similarity=0.170 Sum_probs=97.9
Q ss_pred HHHHHhcCCccccccC--CCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhc
Q 043149 2 VLRLIDFDRNLVRVQG--REGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRY 79 (344)
Q Consensus 2 v~~LL~~~~~~~~~~d--~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~ 79 (344)
|+.||+.+.+ ++..| .+|.||||+|+..|+.++++.|++. +.+++..|..|+||||+|+..|+.+++++|+++|++
T Consensus 216 v~~LL~~Gad-vn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~-Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad 293 (368)
T 3jue_A 216 MADALAHGAD-VNWVNGGQDNATPLIQATAANSLLACEFLLQN-GANVNQADSAGRGPLHHATILGHTGLACLFLKRGAD 293 (368)
T ss_dssp HHHHHHTTCC-TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHHHcCCC-CCccccccCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCC
Confidence 6778888776 77777 8999999999999999999888876 888999999999999999999999999999996544
Q ss_pred cCccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccC--cccccccCCCCCHHHHHh
Q 043149 80 VNMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVR--DQINARNSKDNTAMDMVK 135 (344)
Q Consensus 80 ~~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~--~~~~~~n~~G~Tpl~~a~ 135 (344)
++.+|.+|+||||+|+..|+.+++++|+..+. .+....+..+.|+++++.
T Consensus 294 ------~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~ 345 (368)
T 3jue_A 294 ------LGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFR 345 (368)
T ss_dssp ------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC--------------------
T ss_pred ------CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHH
Confidence 78899999999999999999999999998752 334456778899998887
No 108
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.75 E-value=6e-18 Score=133.82 Aligned_cols=99 Identities=13% Similarity=0.130 Sum_probs=89.6
Q ss_pred ccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCC
Q 043149 50 VTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNT 129 (344)
Q Consensus 50 ~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~T 129 (344)
.+..|.||||+|+..|+.+++++|++.+. .++.+|..|+||||+|+..|+.+++++|++++ ++++.+|..|+|
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t 75 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGE------DVNRTLEGGRKPLHYAADCGQLEILEFLLLKG-ADINAPDKHHIT 75 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTC------CTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTSCC
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCC------CcCccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCC
Confidence 35678999999999999999999999654 37789999999999999999999999999999 999999999999
Q ss_pred HHHHHhhhcCCCccHHHHHHHHHHcCCCCCC
Q 043149 130 AMDMVKFHLQTKPEFEELKSMVRKAGGRERS 160 (344)
Q Consensus 130 pl~~a~~~~~~~~~~~~i~~~L~~~ga~~~~ 160 (344)
|||+|+ ..++.+++++|+++|++++.
T Consensus 76 pL~~A~-----~~~~~~~v~~Ll~~ga~~~~ 101 (123)
T 3aaa_C 76 PLLSAV-----YEGHVSCVKLLLSKGADKTV 101 (123)
T ss_dssp HHHHHH-----HHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHH-----HcCCHHHHHHHHHcCCCCCC
Confidence 999999 88899999999999999876
No 109
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.74 E-value=4.8e-20 Score=174.28 Aligned_cols=131 Identities=11% Similarity=0.101 Sum_probs=68.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhCCC--CcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCCC
Q 043149 17 GREGVTPLHYVAEKGNVDLLCKFLAACPE--SILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEGN 94 (344)
Q Consensus 17 d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~--~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~ 94 (344)
+.+++||||+||..|+.++++.|++.+.. ..+..|..|+||||+|+.+|+.++|++|+++|++... ..++..+ +
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~-~~i~~~~---~ 164 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIM-AMIQAEN---Y 164 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHH-HHHSHHH---H
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-cccCCCC---C
Confidence 33445666666666666666666554221 1122344556666666666666666666665432100 0111122 5
Q ss_pred cHHHHHHHCCcHHHHHHHHhccCccccc--ccCCCCCHHHHHhhhcCCCccHHHHHHHHHHcCC
Q 043149 95 TLLHISISRSHIQIVRLIVKRVRDQINA--RNSKDNTAMDMVKFHLQTKPEFEELKSMVRKAGG 156 (344)
Q Consensus 95 TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~--~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ga 156 (344)
||||+|+..|+.+++++|+++| ++++. +|..|.||||+|+. ..++.+++++|++.|+
T Consensus 165 TpLh~Aa~~G~~eiv~~Ll~~g-a~~~~~~~d~~g~TpL~~Aa~----~~G~~eiv~~Ll~~ga 223 (376)
T 2aja_A 165 HAFRLAAENGHLHVLNRLCELA-PTEATAMIQAENYYAFRWAAV----GRGHHNVINFLLDCPV 223 (376)
T ss_dssp HHHHHHHHTTCHHHHHHHHHSC-GGGHHHHHHHHHHHHHHHHHS----TTCCHHHHHHHTTSHH
T ss_pred CHHHHHHHCCCHHHHHHHHHcC-CccchhccCCCCCCHHHHHHH----HCCCHHHHHHHHhCCC
Confidence 6666666666666666666666 55555 56666666666651 2344555555555443
No 110
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.74 E-value=5.9e-18 Score=131.57 Aligned_cols=95 Identities=21% Similarity=0.201 Sum_probs=60.3
Q ss_pred ccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccC
Q 043149 11 NLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKN 90 (344)
Q Consensus 11 ~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d 90 (344)
......|.+|.||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+.+|+.+++++|+++|. .++.+|
T Consensus 15 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga------~~~~~d 87 (110)
T 2zgd_A 15 PRGSHMGSDLGKKLLEAARAGQDDEVRILMAN-GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGA------DVXAQD 87 (110)
T ss_dssp -------CCHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCC
T ss_pred CcccccCCccchHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC------Cccccc
Confidence 33455666777777777777777777666654 55666667777777777777777777777776443 255666
Q ss_pred CCCCcHHHHHHHCCcHHHHHHH
Q 043149 91 DEGNTLLHISISRSHIQIVRLI 112 (344)
Q Consensus 91 ~~G~TpLH~Aa~~g~~~~v~~L 112 (344)
..|+||||+|+..|+.+++++|
T Consensus 88 ~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 88 KFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHH
T ss_pred cCCCcHHHHHHHcCCHHHHHHh
Confidence 7777777777777777776654
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.72 E-value=1.8e-17 Score=128.74 Aligned_cols=96 Identities=18% Similarity=0.231 Sum_probs=82.5
Q ss_pred CCCcccccCCCChHHHHHHHcCCHHHHHHHHhchhccCccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccc
Q 043149 44 PESILQVTIRKETALHVAAKYDRLEVLETMLGWLRYVNMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINAR 123 (344)
Q Consensus 44 ~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~ 123 (344)
+......|.+|+|+||+|+..|+.+++++|++.+. .++.+|..|+||||+|+..|+.+++++|++++ ++++.+
T Consensus 14 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~------~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~g-a~~~~~ 86 (110)
T 2zgd_A 14 VPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGA------DVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG-ADVXAQ 86 (110)
T ss_dssp --------CCHHHHHHHHHHHTCHHHHHHHHHTTC------CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC
T ss_pred CCcccccCCccchHHHHHHHcCCHHHHHHHHHcCC------CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCcccc
Confidence 33455678899999999999999999999999654 47789999999999999999999999999998 999999
Q ss_pred cCCCCCHHHHHhhhcCCCccHHHHHHHH
Q 043149 124 NSKDNTAMDMVKFHLQTKPEFEELKSMV 151 (344)
Q Consensus 124 n~~G~Tpl~~a~~~~~~~~~~~~i~~~L 151 (344)
|..|+||+|+|+ ..++.+++++|
T Consensus 87 d~~g~tpl~~A~-----~~~~~~~~~~L 109 (110)
T 2zgd_A 87 DKFGKTAFDISI-----DNGNEDLAEIL 109 (110)
T ss_dssp CTTSCCHHHHHH-----HHTCHHHHHHH
T ss_pred ccCCCcHHHHHH-----HcCCHHHHHHh
Confidence 999999999999 88889998876
No 112
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.71 E-value=2.4e-17 Score=139.69 Aligned_cols=121 Identities=22% Similarity=0.276 Sum_probs=105.2
Q ss_pred HHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccc-CCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 2 VLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVT-IRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 2 v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d-~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
++.||+ +. .++.+|.+|+||||+|+..|+.++++.|++. +.+++.+| ..|+||||+|+..|+.+++++|+++|.+
T Consensus 60 v~~Ll~-~~-~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~- 135 (183)
T 3deo_A 60 LSQLLE-DR-DVDAVDENGRTALLFVAGLGSDKCVRLLAEA-GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD- 135 (183)
T ss_dssp HHHHTT-TS-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCC-
T ss_pred HHHHHh-cC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCC-
Confidence 677887 44 4899999999999999999999999888876 77788887 8899999999999999999999996544
Q ss_pred CccccccccCCCCCcHHHHHHHCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHHc
Q 043149 81 NMDDILNWKNDEGNTLLHISISRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRKA 154 (344)
Q Consensus 81 ~~~~~ln~~d~~G~TpLH~Aa~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~~ 154 (344)
++.+|.+|+||||+|+..++ ...+.+|+++++ ..+..+++++|.++
T Consensus 136 -----~~~~d~~g~tpl~~A~~~~~------------------~~~~~~~l~~a~-----~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 136 -----IEVEDERGLTALELAREILK------------------TTPKGNPMQFGR-----RIGLEKVINVLEGQ 181 (183)
T ss_dssp -----TTCCCTTSCCHHHHHHHHHH------------------TCCCCSHHHHHH-----HHHHHHHHHHHHTC
T ss_pred -----CcCCCCCCCCHHHHHHHhcc------------------CcccccHHHHHH-----HcCHHHHHHHHHHh
Confidence 67899999999999986431 245789999999 89999999999875
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.71 E-value=7.7e-19 Score=166.02 Aligned_cols=140 Identities=14% Similarity=0.118 Sum_probs=111.7
Q ss_pred CHHHHHhcCCc--cccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCC--cccccCCCChHHHHHHHcCCHHHHHHHHhc
Q 043149 1 MVLRLIDFDRN--LVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPES--ILQVTIRKETALHVAAKYDRLEVLETMLGW 76 (344)
Q Consensus 1 ~v~~LL~~~~~--~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~--~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~ 76 (344)
+|+.|++.+.. .....|..|.||||+||..|+.++|+.|++.+++. .+..+.+ +||||+|+.+|+.+++++|+++
T Consensus 107 ~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ 185 (376)
T 2aja_A 107 ALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCEL 185 (376)
T ss_dssp HHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHS
T ss_pred HHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHc
Confidence 36778877652 12345678899999999999999999999875321 2222233 9999999999999999999997
Q ss_pred hhccCccccccc--cCCCCCcHHHHHH-HCCcHHHHHHHHhccCcccccccCCCCCHHHHHhhhcCCCccHHHHHHHHHH
Q 043149 77 LRYVNMDDILNW--KNDEGNTLLHISI-SRSHIQIVRLIVKRVRDQINARNSKDNTAMDMVKFHLQTKPEFEELKSMVRK 153 (344)
Q Consensus 77 ~~~~~~~~~ln~--~d~~G~TpLH~Aa-~~g~~~~v~~Ll~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~~~i~~~L~~ 153 (344)
|++ ++. .|.+|+||||+|+ ..|+.+++++|++++ + .|.||++.|+ ..++.+++++|++
T Consensus 186 ga~------~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~g-a-------~~~taL~~Aa-----~~g~~evv~lL~~ 246 (376)
T 2aja_A 186 APT------EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP-V-------MLAYAEIHEF-----EYGEKYVNPFIAR 246 (376)
T ss_dssp CGG------GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH-H-------HHHHHHHCTT-----TTTTTTHHHHHHH
T ss_pred CCc------cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCC-C-------ccchHHHHHH-----HCCCHHHHHHHHh
Confidence 654 444 7888999999999 999999999999977 3 2889999999 8899999999999
Q ss_pred cCCCCCC
Q 043149 154 AGGRERS 160 (344)
Q Consensus 154 ~ga~~~~ 160 (344)
+|++.+.
T Consensus 247 ~ga~~~~ 253 (376)
T 2aja_A 247 HVNRLKE 253 (376)
T ss_dssp HHHHHHH
T ss_pred cCccccc
Confidence 9877643
No 114
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.70 E-value=2.8e-17 Score=146.01 Aligned_cols=92 Identities=27% Similarity=0.309 Sum_probs=81.1
Q ss_pred HHHHHhcCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCccccc-CCCChHHHHHHHcCCHHHHHHHHhchhcc
Q 043149 2 VLRLIDFDRNLVRVQGREGVTPLHYVAEKGNVDLLCKFLAACPESILQVT-IRKETALHVAAKYDRLEVLETMLGWLRYV 80 (344)
Q Consensus 2 v~~LL~~~~~~~~~~d~~G~TpLh~Aa~~G~~~~v~~LL~~~~~~~~~~d-~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 80 (344)
|+.||+ +. .++.+|.+|+||||+||..|+.++++.|++. +.+++.+| ..|+||||+|+.+|+.+++++|+++|.+
T Consensus 61 v~~Ll~-~~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~- 136 (244)
T 3ui2_A 61 LSQLLE-DR-DVDAVDENGRTALLFVAGLGSDKCVRLLAEA-GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD- 136 (244)
T ss_dssp HHHTTT-TC-CTTCBCTTSCBHHHHHHHHTCHHHHHHHHHT-TCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCC-
T ss_pred HHHHHc-CC-CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-
Confidence 677787 54 4899999999999999999999999888876 77888888 7899999999999999999999996544
Q ss_pred CccccccccCCCCCcHHHHHHH
Q 043149 81 NMDDILNWKNDEGNTLLHISIS 102 (344)
Q Consensus 81 ~~~~~ln~~d~~G~TpLH~Aa~ 102 (344)
++.+|..|+||||+|+.
T Consensus 137 -----~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 137 -----IEVEDERGLTALELARE 153 (244)
T ss_dssp -----TTCCCTTCCCHHHHHHH
T ss_pred -----CCCCCCCCCcHHHHHHH
Confidence 67789999999999883
Done!