Query 043156
Match_columns 578
No_of_seqs 174 out of 2085
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 13:24:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043156.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043156hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 3.3E-44 7.2E-49 387.0 34.7 535 10-563 18-570 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 2.3E-42 4.9E-47 354.6 28.4 464 17-557 12-491 (498)
3 PRK10207 dipeptide/tripeptide 100.0 1.1E-38 2.3E-43 344.3 37.1 462 22-559 10-482 (489)
4 PRK15462 dipeptide/tripeptide 100.0 1.9E-38 4.1E-43 337.6 35.3 466 23-557 6-483 (493)
5 TIGR00924 yjdL_sub1_fam amino 100.0 9.9E-38 2.1E-42 336.4 34.2 449 22-557 6-472 (475)
6 PRK09584 tppB putative tripept 100.0 2E-36 4.3E-41 328.2 36.1 457 22-559 17-485 (500)
7 TIGR00926 2A1704 Peptide:H+ sy 100.0 2.5E-28 5.4E-33 268.6 34.9 336 40-426 1-343 (654)
8 PRK05122 major facilitator sup 99.9 1.3E-25 2.8E-30 237.5 30.8 378 24-556 13-392 (399)
9 PRK12382 putative transporter; 99.9 3.8E-25 8.2E-30 233.4 30.5 378 23-554 12-390 (392)
10 PRK03545 putative arabinose tr 99.9 2.1E-25 4.5E-30 235.3 27.8 373 25-554 8-381 (390)
11 PRK11646 multidrug resistance 99.9 2.1E-25 4.4E-30 236.0 26.0 380 21-554 7-389 (400)
12 PRK11551 putative 3-hydroxyphe 99.9 6.6E-25 1.4E-29 232.5 28.6 387 22-554 11-397 (406)
13 TIGR01299 synapt_SV2 synaptic 99.9 1E-24 2.2E-29 243.0 30.1 155 46-217 186-353 (742)
14 PRK14995 methyl viologen resis 99.9 1.6E-24 3.5E-29 235.6 31.1 402 25-509 5-412 (495)
15 PRK10504 putative transporter; 99.9 3.1E-24 6.8E-29 232.0 30.0 402 24-509 8-414 (471)
16 PRK10054 putative transporter; 99.9 6.4E-25 1.4E-29 231.9 23.5 355 22-509 3-358 (395)
17 PRK10489 enterobactin exporter 99.9 2.8E-24 6E-29 228.8 27.7 397 28-569 19-415 (417)
18 PRK11663 regulatory protein Uh 99.9 3.1E-24 6.6E-29 229.6 25.7 167 28-212 25-191 (434)
19 PRK10077 xylE D-xylose transpo 99.9 2.7E-24 5.9E-29 232.9 25.4 428 24-562 10-466 (479)
20 TIGR00887 2A0109 phosphate:H+ 99.9 7E-24 1.5E-28 231.1 28.6 181 23-215 13-221 (502)
21 TIGR02332 HpaX 4-hydroxyphenyl 99.9 1.4E-23 3E-28 223.0 29.0 179 23-219 5-189 (412)
22 PRK09556 uhpT sugar phosphate 99.9 1.3E-24 2.8E-29 234.7 21.5 183 23-217 22-210 (467)
23 PRK09874 drug efflux system pr 99.9 6.4E-24 1.4E-28 224.9 25.2 382 26-556 14-401 (408)
24 PRK10213 nepI ribonucleoside t 99.9 2.2E-23 4.7E-28 220.1 28.5 180 16-213 10-189 (394)
25 PRK10406 alpha-ketoglutarate t 99.9 3.3E-23 7E-28 221.6 29.9 174 28-211 24-211 (432)
26 TIGR00879 SP MFS transporter, 99.9 8.3E-24 1.8E-28 227.7 25.0 411 52-559 53-476 (481)
27 COG2814 AraJ Arabinose efflux 99.9 4.8E-23 1E-27 210.3 28.4 381 22-557 9-390 (394)
28 TIGR00893 2A0114 d-galactonate 99.9 2E-23 4.3E-28 218.7 26.2 384 47-551 14-397 (399)
29 PRK09705 cynX putative cyanate 99.9 3.8E-23 8.3E-28 218.3 28.5 360 43-559 26-387 (393)
30 TIGR00903 2A0129 major facilit 99.9 2.2E-23 4.8E-28 217.5 26.1 353 46-550 10-362 (368)
31 PRK15402 multidrug efflux syst 99.9 5.3E-23 1.1E-27 218.1 29.2 358 24-508 8-368 (406)
32 TIGR00900 2A0121 H+ Antiporter 99.9 1.7E-23 3.8E-28 217.3 24.7 358 30-508 3-361 (365)
33 TIGR00894 2A0114euk Na(+)-depe 99.9 1.6E-23 3.4E-28 226.2 25.0 379 56-553 70-450 (465)
34 TIGR00711 efflux_EmrB drug res 99.9 2.2E-23 4.9E-28 226.0 25.8 401 27-508 3-408 (485)
35 TIGR00899 2A0120 sugar efflux 99.9 2.5E-23 5.3E-28 217.7 25.1 368 32-552 3-373 (375)
36 TIGR00890 2A0111 Oxalate/Forma 99.9 7.4E-24 1.6E-28 220.9 20.9 357 42-546 19-375 (377)
37 PRK10642 proline/glycine betai 99.9 1.3E-22 2.8E-27 220.5 30.4 168 25-210 15-204 (490)
38 PRK10091 MFS transport protein 99.9 4.9E-23 1.1E-27 216.6 26.2 174 25-216 2-175 (382)
39 PRK11273 glpT sn-glycerol-3-ph 99.9 2.9E-23 6.3E-28 223.3 24.7 176 28-217 27-206 (452)
40 PRK09952 shikimate transporter 99.9 2.1E-22 4.5E-27 215.6 31.0 389 23-552 19-432 (438)
41 TIGR00891 2A0112 putative sial 99.9 8.9E-23 1.9E-27 215.4 26.9 175 20-212 6-182 (405)
42 cd06174 MFS The Major Facilita 99.9 8.4E-23 1.8E-27 210.5 25.7 348 29-551 2-350 (352)
43 KOG2532 Permease of the major 99.9 4.1E-23 8.8E-28 219.3 22.6 373 55-554 66-448 (466)
44 PF07690 MFS_1: Major Facilita 99.9 5.5E-24 1.2E-28 220.1 15.6 350 32-501 2-352 (352)
45 TIGR00710 efflux_Bcr_CflA drug 99.9 1.1E-22 2.5E-27 213.3 25.6 354 24-506 3-357 (385)
46 PRK03699 putative transporter; 99.9 3.9E-22 8.4E-27 210.7 29.1 374 23-552 4-379 (394)
47 PRK12307 putative sialic acid 99.9 1.9E-22 4.2E-27 215.1 26.7 167 23-207 15-181 (426)
48 COG2271 UhpC Sugar phosphate p 99.9 2.7E-23 5.8E-28 209.4 18.5 414 16-556 15-437 (448)
49 PLN00028 nitrate transmembrane 99.9 1.5E-22 3.2E-27 219.0 25.8 175 24-217 34-217 (476)
50 TIGR00892 2A0113 monocarboxyla 99.9 6.5E-23 1.4E-27 220.6 22.4 374 50-548 42-416 (455)
51 PRK03633 putative MFS family t 99.9 4.7E-22 1E-26 209.0 27.3 364 24-549 4-368 (381)
52 PRK11195 lysophospholipid tran 99.9 6.6E-22 1.4E-26 208.8 28.4 348 26-508 3-354 (393)
53 TIGR00895 2A0115 benzoate tran 99.9 4.4E-22 9.5E-27 209.3 27.0 379 24-507 15-397 (398)
54 PRK15011 sugar efflux transpor 99.9 7.2E-22 1.6E-26 208.5 28.6 376 22-552 11-390 (393)
55 TIGR00898 2A0119 cation transp 99.9 3.4E-22 7.4E-27 218.1 26.3 389 51-563 113-504 (505)
56 PRK03893 putative sialic acid 99.9 3.5E-22 7.5E-27 217.5 26.2 170 22-209 16-185 (496)
57 PRK11043 putative transporter; 99.9 9.8E-22 2.1E-26 208.0 28.1 163 38-217 15-179 (401)
58 TIGR00897 2A0118 polyol permea 99.9 3.9E-21 8.5E-26 203.6 31.5 390 22-552 9-400 (402)
59 PRK09528 lacY galactoside perm 99.9 3.3E-22 7.2E-27 213.0 22.2 393 26-555 10-405 (420)
60 PF00854 PTR2: POT family; In 99.9 5.3E-24 1.2E-28 223.0 8.0 365 93-493 1-369 (372)
61 PRK15034 nitrate/nitrite trans 99.9 1.4E-21 3E-26 206.4 25.7 384 28-557 35-458 (462)
62 PRK15075 citrate-proton sympor 99.9 3.2E-21 6.9E-26 206.4 28.4 164 25-206 14-199 (434)
63 TIGR00712 glpT glycerol-3-phos 99.9 5.2E-22 1.1E-26 212.7 22.0 159 48-220 48-207 (438)
64 PRK11652 emrD multidrug resist 99.9 8.4E-21 1.8E-25 200.4 28.1 173 23-213 5-177 (394)
65 TIGR00889 2A0110 nucleoside tr 99.9 1.8E-20 3.9E-25 199.4 30.7 398 29-564 5-413 (418)
66 PRK11102 bicyclomycin/multidru 99.9 9.1E-21 2E-25 198.7 26.4 157 43-217 8-164 (377)
67 PRK15403 multidrug efflux syst 99.9 2.9E-20 6.3E-25 197.5 30.3 149 52-217 41-189 (413)
68 PRK10473 multidrug efflux syst 99.9 2.2E-20 4.7E-25 197.1 29.1 171 28-216 5-175 (392)
69 TIGR00881 2A0104 phosphoglycer 99.9 7.5E-22 1.6E-26 205.9 17.3 155 47-218 15-170 (379)
70 TIGR00902 2A0127 phenyl propri 99.9 2.8E-20 6.1E-25 195.7 28.1 364 28-548 6-374 (382)
71 KOG0254 Predicted transporter 99.9 1.8E-20 3.9E-25 204.6 27.4 401 62-565 89-495 (513)
72 TIGR00882 2A0105 oligosacchari 99.9 1.7E-20 3.8E-25 198.2 25.0 390 26-551 2-393 (396)
73 KOG0569 Permease of the major 99.9 9E-21 2E-25 199.3 22.3 402 56-563 48-464 (485)
74 COG2223 NarK Nitrate/nitrite t 99.9 3.3E-20 7.1E-25 187.5 23.1 393 22-557 10-405 (417)
75 PRK11128 putative 3-phenylprop 99.9 6.4E-20 1.4E-24 193.0 26.5 336 34-508 12-353 (382)
76 TIGR00886 2A0108 nitrite extru 99.9 1E-20 2.2E-25 197.3 20.1 166 27-210 2-179 (366)
77 PRK10133 L-fucose transporter; 99.9 9.8E-20 2.1E-24 194.7 27.4 156 22-192 22-177 (438)
78 PRK06814 acylglycerophosphoeth 99.9 2.5E-20 5.3E-25 222.7 24.3 349 53-508 42-394 (1140)
79 PRK08633 2-acyl-glycerophospho 99.9 6.4E-20 1.4E-24 219.5 27.6 362 26-508 9-382 (1146)
80 KOG1330 Sugar transporter/spin 99.9 3.8E-21 8.2E-26 195.6 12.7 180 22-219 29-209 (493)
81 TIGR00792 gph sugar (Glycoside 99.8 1.2E-19 2.7E-24 194.0 24.7 355 34-509 7-379 (437)
82 TIGR00883 2A0106 metabolite-pr 99.8 2.3E-19 4.9E-24 188.2 24.7 149 48-213 14-185 (394)
83 PRK11010 ampG muropeptide tran 99.8 1.3E-18 2.8E-23 188.8 30.2 389 23-554 9-404 (491)
84 PF05977 MFS_3: Transmembrane 99.8 1.2E-18 2.5E-23 188.4 28.1 383 27-552 11-393 (524)
85 TIGR00896 CynX cyanate transpo 99.8 5.7E-19 1.2E-23 183.7 18.6 325 47-509 20-347 (355)
86 TIGR00885 fucP L-fucose:H+ sym 99.8 6.5E-18 1.4E-22 179.1 26.1 172 28-214 5-202 (410)
87 TIGR00901 2A0125 AmpG-related 99.8 4.2E-18 9.2E-23 177.2 22.7 156 47-217 8-176 (356)
88 TIGR00805 oat sodium-independe 99.8 7.6E-18 1.6E-22 187.3 23.5 189 23-219 29-281 (633)
89 PF00083 Sugar_tr: Sugar (and 99.8 1.5E-22 3.2E-27 217.6 -13.8 391 62-564 46-447 (451)
90 PRK11902 ampG muropeptide tran 99.8 8.1E-17 1.7E-21 170.6 30.0 166 33-214 6-177 (402)
91 TIGR01301 GPH_sucrose GPH fami 99.8 5.3E-17 1.2E-21 172.8 28.3 436 26-557 4-475 (477)
92 PF06609 TRI12: Fungal trichot 99.8 6.1E-16 1.3E-20 167.0 32.7 388 47-507 64-464 (599)
93 PRK09848 glucuronide transport 99.7 3.3E-16 7.2E-21 168.3 26.8 361 26-510 8-388 (448)
94 KOG0255 Synaptic vesicle trans 99.7 2.8E-16 6.1E-21 172.2 26.0 140 55-214 111-250 (521)
95 PRK09669 putative symporter Ya 99.7 3.5E-16 7.7E-21 167.9 25.4 363 25-511 8-389 (444)
96 TIGR00806 rfc RFC reduced fola 99.7 2.2E-16 4.8E-21 164.1 22.2 153 46-217 45-201 (511)
97 KOG3764 Vesicular amine transp 99.7 2E-17 4.4E-22 165.0 13.5 150 55-220 99-248 (464)
98 PF13347 MFS_2: MFS/sugar tran 99.7 5.9E-16 1.3E-20 165.4 25.9 356 35-510 10-384 (428)
99 PRK10429 melibiose:sodium symp 99.7 1.4E-15 3E-20 164.7 28.5 368 28-511 8-394 (473)
100 TIGR02718 sider_RhtX_FptX side 99.7 3E-15 6.5E-20 157.9 29.2 177 28-218 3-183 (390)
101 KOG0253 Synaptic vesicle trans 99.7 5.4E-15 1.2E-19 145.9 26.3 426 37-561 88-527 (528)
102 KOG2504 Monocarboxylate transp 99.7 1.9E-16 4.1E-21 170.5 17.3 427 28-553 44-476 (509)
103 KOG2615 Permease of the major 99.7 4.4E-16 9.6E-21 154.6 16.8 121 55-193 61-181 (451)
104 KOG0252 Inorganic phosphate tr 99.7 1.1E-15 2.3E-20 155.3 15.6 402 59-564 81-508 (538)
105 TIGR00788 fbt folate/biopterin 99.7 2.5E-14 5.5E-19 154.2 27.0 381 24-509 23-412 (468)
106 COG0738 FucP Fucose permease [ 99.7 2.3E-14 5E-19 144.4 23.8 155 25-193 11-165 (422)
107 PRK11462 putative transporter; 99.6 1.1E-13 2.3E-18 149.2 28.3 183 25-216 8-201 (460)
108 PTZ00207 hypothetical protein; 99.6 1.4E-13 3.1E-18 149.7 28.9 176 24-216 26-202 (591)
109 COG2807 CynX Cyanate permease 99.6 1.9E-13 4E-18 135.9 25.6 369 31-555 17-387 (395)
110 PF01306 LacY_symp: LacY proto 99.6 1.5E-14 3.3E-19 149.7 18.2 393 26-557 7-404 (412)
111 KOG2533 Permease of the major 99.6 5.5E-14 1.2E-18 150.1 22.4 151 54-221 73-229 (495)
112 PF03825 Nuc_H_symport: Nucleo 99.6 3.6E-13 7.7E-18 141.6 27.3 387 31-556 7-398 (400)
113 PF11700 ATG22: Vacuole efflux 99.6 2.9E-12 6.2E-17 137.4 29.1 403 25-555 3-470 (477)
114 PRK15011 sugar efflux transpor 99.5 3.4E-13 7.3E-18 142.4 15.7 178 22-217 212-389 (393)
115 COG2211 MelB Na+/melibiose sym 99.5 1.2E-11 2.6E-16 129.5 25.1 365 25-509 11-395 (467)
116 PRK10642 proline/glycine betai 99.5 5.4E-13 1.2E-17 145.1 15.4 182 23-218 247-429 (490)
117 PF03209 PUCC: PUCC protein; 99.4 1.6E-11 3.5E-16 125.2 22.1 375 53-554 6-399 (403)
118 KOG4686 Predicted sugar transp 99.4 1.1E-13 2.5E-18 131.9 5.2 378 47-554 64-444 (459)
119 PRK05122 major facilitator sup 99.4 1.5E-12 3.2E-17 137.7 13.3 173 35-227 225-397 (399)
120 PRK09556 uhpT sugar phosphate 99.4 2E-12 4.3E-17 139.8 12.8 177 26-217 258-447 (467)
121 PRK09952 shikimate transporter 99.4 3.7E-12 8E-17 136.5 14.5 184 22-218 246-432 (438)
122 TIGR00883 2A0106 metabolite-pr 99.4 9.8E-13 2.1E-17 137.8 9.5 173 22-208 215-390 (394)
123 TIGR00899 2A0120 sugar efflux 99.4 5.1E-12 1.1E-16 132.0 14.1 166 33-216 206-371 (375)
124 PRK03699 putative transporter; 99.4 4.8E-12 1E-16 133.7 13.5 171 26-214 205-375 (394)
125 TIGR00890 2A0111 Oxalate/Forma 99.4 5E-12 1.1E-16 131.7 13.2 170 27-212 206-375 (377)
126 cd06174 MFS The Major Facilita 99.4 9.6E-12 2.1E-16 128.0 14.6 174 26-216 175-349 (352)
127 TIGR01299 synapt_SV2 synaptic 99.3 9.5E-12 2.1E-16 139.5 12.9 135 66-218 599-733 (742)
128 PRK09874 drug efflux system pr 99.3 9.5E-12 2.1E-16 131.7 12.3 177 25-218 218-397 (408)
129 TIGR00893 2A0114 d-galactonate 99.3 2.7E-11 6E-16 126.6 15.6 173 26-216 215-396 (399)
130 TIGR00889 2A0110 nucleoside tr 99.3 8.1E-12 1.8E-16 133.0 11.5 178 29-220 211-403 (418)
131 PRK12382 putative transporter; 99.3 1.3E-11 2.8E-16 130.2 12.4 162 37-218 227-388 (392)
132 PRK15075 citrate-proton sympor 99.3 1.5E-11 3.3E-16 131.6 12.8 161 25-198 237-398 (434)
133 PRK09705 cynX putative cyanate 99.3 4.6E-11 1E-15 126.2 16.0 177 26-220 205-382 (393)
134 PRK11551 putative 3-hydroxyphe 99.3 1.9E-11 4.1E-16 129.5 13.0 172 28-217 222-394 (406)
135 TIGR00902 2A0127 phenyl propri 99.3 3.3E-11 7.1E-16 126.8 14.7 169 26-214 205-374 (382)
136 PRK03545 putative arabinose tr 99.3 5.3E-11 1.2E-15 125.5 15.8 175 28-220 207-381 (390)
137 PRK03633 putative MFS family t 99.3 4.4E-11 9.5E-16 125.7 15.0 160 36-216 210-369 (381)
138 PRK09528 lacY galactoside perm 99.3 1.2E-11 2.6E-16 131.8 10.4 165 35-216 232-400 (420)
139 KOG2563 Permease of the major 99.3 4.6E-10 9.9E-15 114.9 20.9 386 48-564 66-461 (480)
140 PRK10489 enterobactin exporter 99.3 2.7E-11 5.9E-16 128.9 11.8 162 42-220 239-400 (417)
141 COG2271 UhpC Sugar phosphate p 99.3 2.4E-11 5.1E-16 123.5 10.6 180 26-219 252-434 (448)
142 PRK11663 regulatory protein Uh 99.3 4.2E-11 9.2E-16 128.2 13.3 175 26-217 243-422 (434)
143 TIGR00880 2_A_01_02 Multidrug 99.3 5E-12 1.1E-16 111.8 4.9 132 69-217 5-136 (141)
144 PRK11273 glpT sn-glycerol-3-ph 99.3 3.6E-11 7.8E-16 129.5 12.4 178 26-218 253-434 (452)
145 KOG2325 Predicted transporter/ 99.2 1.3E-11 2.7E-16 129.6 8.1 191 17-220 25-230 (488)
146 COG2223 NarK Nitrate/nitrite t 99.2 5.9E-11 1.3E-15 120.8 12.5 186 25-221 217-403 (417)
147 TIGR00891 2A0112 putative sial 99.2 5.3E-11 1.1E-15 125.5 12.2 158 30-203 242-400 (405)
148 TIGR00897 2A0118 polyol permea 99.2 1.8E-10 3.9E-15 122.1 15.2 177 26-217 222-399 (402)
149 PRK10406 alpha-ketoglutarate t 99.2 1E-10 2.3E-15 125.1 13.5 170 35-217 252-422 (432)
150 PRK03893 putative sialic acid 99.2 1.4E-10 3E-15 126.3 14.2 150 44-208 293-442 (496)
151 COG2270 Permeases of the major 99.2 7.8E-10 1.7E-14 112.7 18.4 364 45-554 34-430 (438)
152 COG2814 AraJ Arabinose efflux 99.2 2.4E-10 5.2E-15 117.4 14.8 178 25-220 210-387 (394)
153 TIGR01272 gluP glucose/galacto 99.2 1.4E-09 3E-14 111.0 20.2 86 123-214 7-108 (310)
154 TIGR00892 2A0113 monocarboxyla 99.2 2.8E-11 6E-16 130.4 7.0 172 26-214 241-416 (455)
155 TIGR00879 SP MFS transporter, 99.2 2.5E-10 5.5E-15 122.7 13.1 162 49-220 306-471 (481)
156 KOG2816 Predicted transporter 99.2 1.1E-09 2.4E-14 116.5 17.4 359 26-511 21-393 (463)
157 PLN00028 nitrate transmembrane 99.1 7.5E-10 1.6E-14 120.0 16.6 173 28-219 254-433 (476)
158 PRK11010 ampG muropeptide tran 99.1 6.6E-10 1.4E-14 120.8 14.3 179 29-220 225-404 (491)
159 TIGR02718 sider_RhtX_FptX side 99.1 4.1E-10 8.8E-15 118.8 12.0 174 28-213 210-385 (390)
160 PRK11128 putative 3-phenylprop 99.1 1.1E-09 2.3E-14 115.3 14.9 169 26-214 205-374 (382)
161 TIGR02332 HpaX 4-hydroxyphenyl 99.1 4.5E-10 9.9E-15 119.4 11.8 165 26-207 242-409 (412)
162 PRK15402 multidrug efflux syst 99.1 9.5E-10 2E-14 116.6 14.2 174 27-213 216-389 (406)
163 PF11700 ATG22: Vacuole efflux 99.1 1.1E-09 2.5E-14 117.5 14.8 184 25-217 280-466 (477)
164 TIGR00712 glpT glycerol-3-phos 99.1 3.1E-10 6.6E-15 121.7 10.3 179 26-219 251-433 (438)
165 KOG4686 Predicted sugar transp 99.1 4.9E-10 1.1E-14 107.4 10.2 174 15-207 253-430 (459)
166 PRK10504 putative transporter; 99.1 1.3E-09 2.9E-14 117.8 14.5 157 27-197 262-418 (471)
167 PRK10091 MFS transport protein 99.1 1.3E-09 2.9E-14 114.6 13.2 171 28-216 201-373 (382)
168 TIGR01272 gluP glucose/galacto 99.0 1.8E-09 4E-14 110.1 13.1 162 26-207 140-303 (310)
169 TIGR00896 CynX cyanate transpo 99.0 1.5E-09 3.3E-14 112.8 12.3 156 26-198 197-353 (355)
170 TIGR00881 2A0104 phosphoglycer 99.0 5.1E-10 1.1E-14 116.6 8.4 162 26-201 216-379 (379)
171 TIGR00900 2A0121 H+ Antiporter 99.0 1.2E-09 2.5E-14 113.3 11.0 154 26-196 210-365 (365)
172 TIGR00882 2A0105 oligosacchari 99.0 2E-09 4.2E-14 113.8 12.4 170 28-214 217-390 (396)
173 TIGR00895 2A0115 benzoate tran 99.0 1.1E-09 2.5E-14 114.8 10.1 148 26-191 250-397 (398)
174 PF03092 BT1: BT1 family; Int 99.0 1.5E-08 3.2E-13 108.2 18.3 162 48-220 11-176 (433)
175 TIGR00711 efflux_EmrB drug res 99.0 1.8E-09 4E-14 117.0 11.0 156 26-194 255-410 (485)
176 PRK12307 putative sialic acid 99.0 4.9E-09 1.1E-13 111.7 13.7 147 41-203 246-392 (426)
177 TIGR00894 2A0114euk Na(+)-depe 99.0 7.2E-09 1.6E-13 112.0 14.5 177 26-217 261-448 (465)
178 PRK15034 nitrate/nitrite trans 99.0 6.2E-09 1.4E-13 110.6 13.5 188 26-220 252-455 (462)
179 TIGR00792 gph sugar (Glycoside 99.0 2.4E-09 5.2E-14 114.5 10.2 162 26-198 222-384 (437)
180 KOG3626 Organic anion transpor 98.9 1.2E-07 2.6E-12 104.0 22.8 193 25-224 95-348 (735)
181 PRK14995 methyl viologen resis 98.9 3.5E-09 7.6E-14 115.4 11.1 154 26-193 259-412 (495)
182 PRK10054 putative transporter; 98.9 3.9E-09 8.5E-14 111.6 10.9 173 26-216 206-381 (395)
183 PF03137 OATP: Organic Anion T 98.9 1.3E-10 2.8E-15 126.5 -0.8 178 40-225 16-256 (539)
184 PF05977 MFS_3: Transmembrane 98.9 1.1E-08 2.4E-13 111.1 13.9 168 32-216 224-391 (524)
185 PRK10133 L-fucose transporter; 98.9 1.1E-08 2.4E-13 109.6 13.1 163 31-213 263-427 (438)
186 TIGR00887 2A0109 phosphate:H+ 98.9 6.3E-09 1.4E-13 113.6 11.1 170 32-215 294-485 (502)
187 PRK10213 nepI ribonucleoside t 98.9 3.1E-08 6.8E-13 104.7 15.5 166 27-211 217-383 (394)
188 PRK10077 xylE D-xylose transpo 98.9 2.1E-08 4.6E-13 108.6 14.6 155 51-218 295-456 (479)
189 PRK08633 2-acyl-glycerophospho 98.9 1.6E-08 3.5E-13 121.6 14.0 164 27-207 233-398 (1146)
190 PRK11902 ampG muropeptide tran 98.9 2.9E-08 6.2E-13 105.2 14.0 155 47-219 230-390 (402)
191 PRK11646 multidrug resistance 98.9 1.6E-08 3.5E-13 107.0 12.0 154 44-214 226-383 (400)
192 TIGR00710 efflux_Bcr_CflA drug 98.9 3.9E-08 8.4E-13 103.0 14.8 163 27-203 207-370 (385)
193 COG2270 Permeases of the major 98.9 1.3E-08 2.8E-13 104.0 10.5 174 26-216 252-426 (438)
194 PF07690 MFS_1: Major Facilita 98.8 5.6E-09 1.2E-13 107.7 6.6 144 28-185 208-352 (352)
195 PRK06814 acylglycerophosphoeth 98.8 2.5E-08 5.5E-13 119.8 13.2 175 26-207 225-410 (1140)
196 PF13347 MFS_2: MFS/sugar tran 98.8 6.2E-08 1.3E-12 103.6 14.5 163 26-198 225-388 (428)
197 KOG1330 Sugar transporter/spin 98.8 4.4E-09 9.5E-14 108.2 5.3 183 324-563 37-219 (493)
198 PF05631 DUF791: Protein of un 98.8 4.6E-07 1E-11 91.4 19.5 152 55-220 62-217 (354)
199 TIGR00903 2A0129 major facilit 98.8 7.9E-08 1.7E-12 100.5 13.4 167 26-216 192-362 (368)
200 KOG2532 Permease of the major 98.8 5.8E-08 1.3E-12 103.8 12.3 177 26-218 258-446 (466)
201 PRK10473 multidrug efflux syst 98.8 7.4E-08 1.6E-12 101.6 13.1 144 43-208 220-363 (392)
202 KOG2504 Monocarboxylate transp 98.8 1.6E-08 3.4E-13 109.4 8.0 176 26-219 298-476 (509)
203 TIGR00880 2_A_01_02 Multidrug 98.7 1.7E-07 3.7E-12 82.4 13.2 135 366-553 4-138 (141)
204 PRK11195 lysophospholipid tran 98.7 1.5E-07 3.2E-12 99.5 14.5 158 39-214 218-375 (393)
205 TIGR00898 2A0119 cation transp 98.7 3.2E-08 7E-13 108.1 9.4 143 55-217 351-493 (505)
206 TIGR00901 2A0125 AmpG-related 98.7 4E-08 8.7E-13 102.1 9.5 138 27-178 210-355 (356)
207 PRK09848 glucuronide transport 98.7 3.4E-08 7.3E-13 106.2 8.7 163 26-197 228-391 (448)
208 KOG0253 Synaptic vesicle trans 98.7 1.1E-07 2.4E-12 94.9 10.7 171 25-214 325-514 (528)
209 COG2807 CynX Cyanate permease 98.6 4.3E-07 9.3E-12 91.0 13.4 172 26-214 208-380 (395)
210 PRK10429 melibiose:sodium symp 98.6 1.3E-07 2.8E-12 102.5 9.7 165 26-197 231-396 (473)
211 KOG0569 Permease of the major 98.6 2.3E-07 5E-12 98.5 10.9 190 23-223 266-458 (485)
212 PRK11102 bicyclomycin/multidru 98.6 7.1E-07 1.5E-11 93.4 14.5 149 27-189 195-344 (377)
213 TIGR00886 2A0108 nitrite extru 98.6 1.7E-07 3.7E-12 97.5 9.7 139 27-181 226-366 (366)
214 PRK11043 putative transporter; 98.6 1E-06 2.2E-11 93.3 15.5 152 34-199 211-362 (401)
215 PF03825 Nuc_H_symport: Nucleo 98.6 7.6E-07 1.6E-11 93.9 13.9 173 28-217 209-393 (400)
216 KOG3098 Uncharacterized conser 98.5 3.5E-05 7.7E-10 81.3 24.6 103 68-188 56-158 (461)
217 PRK15403 multidrug efflux syst 98.5 1.3E-06 2.9E-11 92.8 14.2 140 364-556 55-194 (413)
218 PRK11652 emrD multidrug resist 98.5 1.1E-06 2.4E-11 92.7 13.1 138 46-198 227-364 (394)
219 PRK09669 putative symporter Ya 98.5 3.4E-07 7.3E-12 98.4 9.1 160 28-198 231-392 (444)
220 KOG3764 Vesicular amine transp 98.5 2.7E-07 5.9E-12 93.3 7.2 149 359-560 105-254 (464)
221 TIGR00885 fucP L-fucose:H+ sym 98.5 1.1E-06 2.4E-11 93.3 12.3 163 28-210 234-403 (410)
222 PF01306 LacY_symp: LacY proto 98.4 7E-07 1.5E-11 93.0 8.8 178 25-219 219-400 (412)
223 TIGR01301 GPH_sucrose GPH fami 98.4 5.9E-06 1.3E-10 88.6 16.1 213 317-558 4-223 (477)
224 PRK10207 dipeptide/tripeptide 98.3 4E-06 8.7E-11 91.1 11.8 136 365-552 55-193 (489)
225 KOG3762 Predicted transporter 98.3 6.6E-05 1.4E-09 79.1 19.1 142 363-557 409-551 (618)
226 PF03209 PUCC: PUCC protein; 98.3 6.3E-06 1.4E-10 84.7 11.4 169 34-215 216-394 (403)
227 COG2211 MelB Na+/melibiose sym 98.3 7.7E-06 1.7E-10 86.3 12.4 162 27-197 237-399 (467)
228 TIGR00924 yjdL_sub1_fam amino 98.3 4E-06 8.6E-11 90.9 10.5 184 29-219 275-468 (475)
229 PRK15462 dipeptide/tripeptide 98.3 6.6E-06 1.4E-10 88.6 11.9 140 364-555 49-191 (493)
230 KOG4332 Predicted sugar transp 98.2 1.5E-05 3.2E-10 76.5 12.3 95 51-157 61-156 (454)
231 PRK11462 putative transporter; 98.2 8.5E-06 1.8E-10 87.9 10.9 160 28-197 230-390 (460)
232 COG0477 ProP Permeases of the 98.2 1.6E-05 3.5E-10 78.9 11.9 146 47-208 23-174 (338)
233 PRK09584 tppB putative tripept 98.2 1.9E-05 4.2E-10 86.1 13.2 131 373-555 70-203 (500)
234 PF06813 Nodulin-like: Nodulin 98.1 3.3E-05 7.1E-10 75.5 12.7 158 47-217 22-180 (250)
235 TIGR00805 oat sodium-independe 98.1 2.3E-05 5.1E-10 87.7 12.5 175 362-554 70-282 (633)
236 PF00083 Sugar_tr: Sugar (and 98.1 5.5E-08 1.2E-12 104.6 -8.3 182 26-220 252-437 (451)
237 PF12832 MFS_1_like: MFS_1 lik 98.0 3.1E-05 6.6E-10 61.1 8.7 68 34-103 8-75 (77)
238 PF06609 TRI12: Fungal trichot 98.0 9E-05 2E-09 81.0 15.1 142 362-557 80-221 (599)
239 PF01770 Folate_carrier: Reduc 98.0 0.00026 5.7E-09 73.6 17.3 154 47-218 24-181 (412)
240 TIGR00788 fbt folate/biopterin 98.0 8.4E-06 1.8E-10 88.2 6.6 147 53-206 279-430 (468)
241 PTZ00207 hypothetical protein; 98.0 0.00012 2.5E-09 80.5 14.4 133 375-556 76-208 (591)
242 TIGR00806 rfc RFC reduced fola 97.9 0.00013 2.8E-09 77.1 13.7 110 362-507 64-173 (511)
243 KOG3762 Predicted transporter 97.9 1.1E-05 2.3E-10 84.9 4.8 172 31-220 376-548 (618)
244 COG0738 FucP Fucose permease [ 97.9 8.2E-05 1.8E-09 76.0 10.3 155 28-202 238-392 (422)
245 KOG3574 Acetyl-CoA transporter 97.9 0.0032 6.9E-08 63.9 21.1 119 447-566 368-501 (510)
246 KOG2533 Permease of the major 97.8 1.8E-05 4E-10 85.1 5.3 165 26-206 273-443 (495)
247 KOG0254 Predicted transporter 97.8 0.00013 2.8E-09 79.9 11.7 134 363-548 92-225 (513)
248 KOG0637 Sucrose transporter an 97.8 8.8E-05 1.9E-09 76.8 9.4 160 26-191 32-202 (498)
249 KOG2615 Permease of the major 97.6 0.00016 3.4E-09 73.3 7.6 112 362-509 70-181 (451)
250 PF06963 FPN1: Ferroportin1 (F 97.6 0.034 7.3E-07 59.0 24.8 188 26-214 2-195 (432)
251 KOG0252 Inorganic phosphate tr 97.5 7.7E-05 1.7E-09 77.2 3.6 180 24-218 302-497 (538)
252 KOG0255 Synaptic vesicle trans 97.4 0.0017 3.6E-08 71.3 12.6 127 366-548 124-250 (521)
253 PF02487 CLN3: CLN3 protein; 97.2 0.026 5.5E-07 59.0 18.1 61 447-507 334-394 (402)
254 TIGR00769 AAA ADP/ATP carrier 97.1 0.1 2.3E-06 56.0 22.5 158 23-192 4-189 (472)
255 KOG2325 Predicted transporter/ 97.0 0.0067 1.5E-07 64.6 11.8 164 362-560 73-236 (488)
256 PF05978 UNC-93: Ion channel r 97.0 0.0041 8.8E-08 56.2 8.6 108 66-191 41-148 (156)
257 COG3104 PTR2 Dipeptide/tripept 96.8 0.0011 2.4E-08 69.9 4.2 135 375-559 76-212 (498)
258 KOG2816 Predicted transporter 96.4 0.0039 8.5E-08 66.7 5.0 150 24-191 238-389 (463)
259 PF00854 PTR2: POT family; In 96.3 0.02 4.2E-07 60.0 9.7 125 402-559 2-129 (372)
260 PF06779 DUF1228: Protein of u 96.2 0.012 2.6E-07 47.0 5.8 65 43-109 9-73 (85)
261 PF03137 OATP: Organic Anion T 96.1 0.00098 2.1E-08 73.0 -1.1 179 362-558 40-255 (539)
262 PF06813 Nodulin-like: Nodulin 96.1 0.06 1.3E-06 52.7 11.0 104 376-508 52-155 (250)
263 KOG0637 Sucrose transporter an 96.0 0.034 7.4E-07 58.1 9.1 168 317-505 32-200 (498)
264 PRK03612 spermidine synthase; 95.9 0.068 1.5E-06 58.5 11.7 177 24-216 15-195 (521)
265 KOG2563 Permease of the major 95.9 0.03 6.6E-07 58.4 8.4 184 26-224 266-455 (480)
266 KOG3626 Organic anion transpor 95.8 0.16 3.5E-06 56.8 14.1 153 399-558 160-348 (735)
267 TIGR00926 2A1704 Peptide:H+ sy 95.6 0.12 2.5E-06 58.2 12.3 131 402-559 55-188 (654)
268 TIGR00769 AAA ADP/ATP carrier 94.8 1.2 2.7E-05 47.9 16.7 56 453-508 133-189 (472)
269 PF03092 BT1: BT1 family; Int 94.6 0.26 5.6E-06 52.7 11.0 115 402-555 60-177 (433)
270 PF05978 UNC-93: Ion channel r 94.4 0.58 1.3E-05 42.3 11.1 62 447-508 88-149 (156)
271 PF06963 FPN1: Ferroportin1 (F 93.8 0.41 8.8E-06 50.9 10.2 133 47-191 279-415 (432)
272 PF03219 TLC: TLC ATP/ADP tran 93.2 2.9 6.3E-05 45.3 15.6 157 22-193 20-205 (491)
273 PF05631 DUF791: Protein of un 93.0 3.7 7.9E-05 42.2 15.1 142 363-556 72-219 (354)
274 KOG3810 Micronutrient transpor 92.7 0.55 1.2E-05 47.6 8.5 129 47-193 25-155 (433)
275 KOG1479 Nucleoside transporter 92.2 17 0.00037 38.1 19.8 59 446-504 341-399 (406)
276 COG0477 ProP Permeases of the 91.0 1.7 3.8E-05 42.3 10.4 108 368-508 47-156 (338)
277 PF02487 CLN3: CLN3 protein; 86.9 0.93 2E-05 47.5 5.0 64 123-192 332-395 (402)
278 PF01770 Folate_carrier: Reduc 86.3 47 0.001 35.1 17.2 61 447-508 93-153 (412)
279 PF13000 Acatn: Acetyl-coenzym 86.0 55 0.0012 35.4 17.6 60 448-507 405-464 (544)
280 KOG3097 Predicted membrane pro 85.7 7.3 0.00016 39.4 10.2 118 22-158 25-142 (390)
281 TIGR00939 2a57 Equilibrative N 84.9 1.5 3.3E-05 46.9 5.6 154 26-188 269-428 (437)
282 PF07672 MFS_Mycoplasma: Mycop 84.8 15 0.00033 36.0 11.8 56 165-222 3-65 (267)
283 KOG3098 Uncharacterized conser 83.2 10 0.00022 40.7 10.7 106 72-185 289-405 (461)
284 COG3202 ATP/ADP translocase [E 82.1 74 0.0016 34.3 16.4 161 22-194 23-210 (509)
285 TIGR00939 2a57 Equilibrative N 81.8 78 0.0017 33.9 27.4 59 447-505 371-429 (437)
286 KOG1237 H+/oligopeptide sympor 75.8 15 0.00033 40.6 9.7 154 379-560 92-252 (571)
287 KOG3880 Predicted small molecu 72.1 97 0.0021 31.5 12.9 73 65-149 65-138 (409)
288 PF03219 TLC: TLC ATP/ADP tran 69.5 1.5E+02 0.0032 32.3 15.1 45 465-509 161-205 (491)
289 KOG4332 Predicted sugar transp 67.3 8.7 0.00019 37.8 4.6 133 64-213 284-425 (454)
290 PF13000 Acatn: Acetyl-coenzym 64.5 1.2E+02 0.0026 32.9 12.7 41 467-507 137-177 (544)
291 PF01733 Nucleoside_tran: Nucl 61.5 2 4.3E-05 43.7 -0.9 108 67-188 187-304 (309)
292 KOG3574 Acetyl-CoA transporter 61.0 20 0.00043 37.3 6.0 94 454-557 139-240 (510)
293 PF12832 MFS_1_like: MFS_1 lik 56.9 11 0.00023 29.5 2.7 29 362-390 37-65 (77)
294 KOG4830 Predicted sugar transp 53.5 21 0.00047 34.9 4.6 64 32-97 23-95 (412)
295 COG3202 ATP/ADP translocase [E 52.2 1.3E+02 0.0028 32.6 10.5 86 464-557 164-249 (509)
296 KOG1479 Nucleoside transporter 51.9 13 0.00027 39.0 3.0 125 48-184 265-395 (406)
297 PF01733 Nucleoside_tran: Nucl 47.2 6.7 0.00015 39.8 0.2 58 447-504 247-304 (309)
298 PF07857 DUF1632: CEO family ( 37.4 1.8E+02 0.0039 28.6 8.3 30 478-507 73-102 (254)
299 PRK03612 spermidine synthase; 36.3 3.4E+02 0.0073 29.8 11.3 51 457-508 119-169 (521)
300 PF06645 SPC12: Microsomal sig 34.7 74 0.0016 24.8 4.2 42 171-215 11-52 (76)
301 COG5336 Uncharacterized protei 33.5 61 0.0013 27.0 3.6 39 66-104 46-84 (116)
302 TIGR02230 ATPase_gene1 F0F1-AT 29.5 2.4E+02 0.0053 23.3 6.6 27 170-196 45-71 (100)
303 PF01891 CbiM: Cobalt uptake s 29.0 2.5E+02 0.0054 26.4 7.8 98 367-478 106-203 (205)
304 PF07672 MFS_Mycoplasma: Mycop 28.7 47 0.001 32.6 2.7 69 480-561 2-70 (267)
305 KOG4112 Signal peptidase subun 26.4 1E+02 0.0022 24.9 3.7 43 171-216 26-68 (101)
306 PF11947 DUF3464: Protein of u 23.5 1.2E+02 0.0026 27.2 4.1 49 449-500 98-146 (153)
307 PF09527 ATPase_gene1: Putativ 21.3 2.1E+02 0.0045 20.4 4.4 35 69-103 7-41 (55)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-44 Score=386.98 Aligned_cols=535 Identities=40% Similarity=0.669 Sum_probs=458.0
Q ss_pred cccCCCccccc---ccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHh
Q 043156 10 VDWKGRPAVKY---KHGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLA 86 (578)
Q Consensus 10 ~~~~~~~~~~~---~~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~la 86 (578)
.+....+..+. ++..|+....++..+.+++.++|++..++..|+..++|.+...+...+..+.......++++++++
T Consensus 18 ~d~~~~~~~~~~~~~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~la 97 (571)
T KOG1237|consen 18 VDYRGPLLGSSIAFKTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLA 97 (571)
T ss_pred eeccCCcccccccceechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 33333444443 566789999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccchhhhhhhhhhhhccCCcccccCCCC---------------CccccccchhHHHHHHHHHHHHhcccccccccccc
Q 043156 87 DAFIGRFKAVLISGSVEFLPPPCNVFDPTA---------------GCKKIEGSDAALLFVALYLIATGTAGIKAALPPYG 151 (578)
Q Consensus 87 D~~~Grr~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v 151 (578)
|.++||.+++.++.++..+|..++.++... .|..........++.++.+.++|.|+..|+..++.
T Consensus 98 D~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fG 177 (571)
T KOG1237|consen 98 DSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFG 177 (571)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhc
Confidence 999999999999999988775443321100 11112223455788899999999999999999999
Q ss_pred ccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcc
Q 043156 152 ADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSS 231 (578)
Q Consensus 152 ~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (578)
+|++++.++.+++.+.+.+.++|+..++|..++-.+..+++++.||.+.|.++.++.+++.++++...+.|+.++|.+ +
T Consensus 178 adQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~g-s 256 (571)
T KOG1237|consen 178 ADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRG-S 256 (571)
T ss_pred ccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCC-C
Confidence 999998777777788899999999999999999999999999999999999999999999999999999999988988 8
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccch
Q 043156 232 VLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVT 311 (578)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (578)
|+..+.+++..+.++|....+.++... + .........++.+..+++|+++.+..+.. ......++|+.+..+
T Consensus 257 p~t~i~~Vlvaa~~k~~~~~~~~~~~~-~-----~~~~~~~~~~~t~~f~~l~kaa~~~~~~~--~~~~~~~~w~lct~~ 328 (571)
T KOG1237|consen 257 PKTRIGQVLVAAAFKRKAVVSLDPEEL-Y-----YDCTDSVAIEGTKPFRFLDKAALKTSDDL--KDGLDANPWRLCTVT 328 (571)
T ss_pred chhHHHHHHHHHHHHHhccCCCcchhc-c-----ccccccccccCCcccchhhHhhccCCccc--ccccccCCccCCCce
Confidence 999999999999999988887764443 1 01111122334566788888877755421 112345789999999
Q ss_pred hhhhHHHHHhHHHHHHHHHHHHHhhhccchhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccc
Q 043156 312 QVENAKIILGMIPIFCCTIVMTLCLAQLQTFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKI 391 (578)
Q Consensus 312 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~ 391 (578)
++||.|.+++.++.+...+.++.++.|+.+.+.+|...||+++++.+.+|++.+..+..+.+.+..|+.+++..|+.||.
T Consensus 329 ~Vee~K~~lr~~Pi~~~~i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~ 408 (571)
T KOG1237|consen 329 QVEEVKAVLRLLPIWLTTIIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKL 408 (571)
T ss_pred ehhhhhhhhhhhHHHHHHHHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhh
Confidence 99999999999999999999999999999999999999999998449999999999999999999999999999999999
Q ss_pred cCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhh
Q 043156 392 TGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLE 471 (578)
Q Consensus 392 ~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~ 471 (578)
++.+.+++.++++.+|+++..++|...+..+..|.+.+..+. +...+++++|++++|+++|++|.+..+...+
T Consensus 409 t~~~~~~t~lqrig~G~~~si~sm~~aa~vE~krl~~~~~~~-------~~~~~mSi~W~iPQyvLig~~Evf~~vg~lE 481 (571)
T KOG1237|consen 409 TGNPFGITPLQRIGIGLVLSILSMAVAGIVEAKRLKTAVSLL-------VETNPMSILWQIPQYVLLGAGEVFTSVGGLE 481 (571)
T ss_pred cCCCCCCChhheeeccchHHHHHHHHHHHHHHHHhhhhhhcc-------CCCCCeeHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 988888999999999999999999999999988877654411 2246899999999999999999999999999
Q ss_pred eeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhh
Q 043156 472 FFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLF 551 (578)
Q Consensus 472 ~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 551 (578)
+.++++|++||+.+++++.+...+|+.++..++..+...+.. ..+|+.++++|+++.+++||+++.++.+....+.+
T Consensus 482 FfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~t~~---~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~~~~~ 558 (571)
T KOG1237|consen 482 FFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFSTGK---AAEWLGFANLNKGRLDYFYWLLAVYSAVNFLYFLI 558 (571)
T ss_pred HhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcccCChhHhhhhHHHHHHHHHHHHHhhhhhheEE
Confidence 999999999999999999999999999999999988765510 34799878999999999999999999999999999
Q ss_pred hccccccccccc
Q 043156 552 MSSRYNYRPQTS 563 (578)
Q Consensus 552 ~~~~~~~~~~~~ 563 (578)
+.+++++++.++
T Consensus 559 ~~~~y~~~~~~~ 570 (571)
T KOG1237|consen 559 CAKRYDYKDDKD 570 (571)
T ss_pred EEEeeeeccccC
Confidence 999998776553
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-42 Score=354.58 Aligned_cols=464 Identities=17% Similarity=0.254 Sum_probs=358.9
Q ss_pred ccccccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch
Q 043156 17 AVKYKHGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLH----LDLAEAANQVTNYMGTSYILSIVVALLADAFIGR 92 (578)
Q Consensus 17 ~~~~~~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg----~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr 92 (578)
..+..-+|||.++.++..++.|+++||++...+..|+..+++ +|++++..+.+.|....++.+++|||+|||++|+
T Consensus 12 ~~~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~ 91 (498)
T COG3104 12 LEMKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGT 91 (498)
T ss_pred cccccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 333345699999999999999999999999999999999988 9999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhccCCcccccCCCCCcccccc--chhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHH
Q 043156 93 FKAVLISGSVEFLPPPCNVFDPTAGCKKIEG--SDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFF 170 (578)
Q Consensus 93 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~ 170 (578)
||++..|.++.++|.+++ +.+ .+...++++..++.+|.|...|+..++++|++|++|+ ||..++
T Consensus 92 ~~tI~lGail~~iGh~~L----------~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dp----rrD~gF 157 (498)
T COG3104 92 RRTIVLGAILMAIGHLVL----------AISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDP----RRDGGF 157 (498)
T ss_pred hHHHHHHHHHHHHHHHHH----------hccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCc----ccCCCc
Confidence 999999999999998776 222 4567889999999999999999999999999999995 799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecC--CCCcchHH--H----HHHHHHH
Q 043156 171 NLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQV--VQGSSVLI--E----IIQVYVA 242 (578)
Q Consensus 171 ~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~----~~~~~~~ 242 (578)
+++|.+.|+|+.++|.+.+++.+.+||...|.++++...++++.++.++++..... ++. .++. . ..+++..
T Consensus 158 t~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 236 (498)
T COG3104 158 TLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDP-NPLSFNFLLPVLGGLVVM 236 (498)
T ss_pred cEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCc-cchhhhhhhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999998888876654432 111 1110 0 0000000
Q ss_pred HHHhcccCCCCCchhhhhhchhhhhhhhcccCCCCCccchhh-HhhhhccCccccccccCCCCCccccchhhhhHHHHHh
Q 043156 243 AIRNRKLELPEDPMELYEINMDKEAAIETEFLPHRDIFRFLD-KAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILG 321 (578)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 321 (578)
...-. ..... ..+...... .........+. ...++ .++.. ++|||+..
T Consensus 237 ~~~~~----------~~~~l-------------~~~~~~~~~~~~~i~~~~~~~------~~~~~-~~~~~-~er~r~~~ 285 (498)
T COG3104 237 ILAAL----------LTLLL-------------NQNTFSGVLLVISILIAIIYF------AEAFR-SPKVF-DERRRLLA 285 (498)
T ss_pred HHHHH----------HHHHH-------------HHHHHHHHHHHHHHHHHHHHH------HHHhc-cCccH-HHHHHHHH
Confidence 00000 00000 000000000 00000000000 00000 11123 78999999
Q ss_pred HHHHHHHHHHHHHhhhccchhhhhhhc-cCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCc
Q 043156 322 MIPIFCCTIVMTLCLAQLQTFSIQQGL-TMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITH 400 (578)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~ 400 (578)
.++++...++||+++.|..+.+..+.. +.+++.. |+++++++++++|++.+++++|+.+++..|+.++. +.++.
T Consensus 286 ~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~-g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~----~~ps~ 360 (498)
T COG3104 286 AIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIF-GFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGN----KQPST 360 (498)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHhhccccc-ceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCC----CCCCc
Confidence 999999999999999999987765554 4456645 68999999999999999999999999999988774 45689
Q ss_pred hhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCch
Q 043156 401 LQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKG 480 (578)
Q Consensus 401 ~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~ 480 (578)
+.|+..|+++++.+++++........ ++....|.+|+++.|+++++||.+.+|...+++++.+|++
T Consensus 361 ~~KFalGl~l~g~~fl~l~~~~~~~~--------------~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~ 426 (498)
T COG3104 361 PIKFALGLILAGLGFLILLLAGIWFG--------------GPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPA 426 (498)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhhc--------------CCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHH
Confidence 99999999999999999888743320 1244689999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhccccc
Q 043156 481 IKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYN 557 (578)
Q Consensus 481 ~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~ 557 (578)
+.+..++.|.+....|+.++..+.+.... +. +..+.......|+.++...++..+..+...++.+
T Consensus 427 ~~s~~ma~wfLt~a~~~~l~g~va~~~~~-~~-----------~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~~~ 491 (498)
T COG3104 427 LKSFIMAMWFLTVAAGQTLGGQVAGLTAV-TD-----------PAYTAFIEGRVFGTIGVVAIVIGILLLLLSPKLN 491 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhhceecccccc-cc-----------hhhhhhhhhhhHHHHHHHHHHHHHHHHHhhHHHH
Confidence 99999999999999999999887763211 10 1112234456799999888888888777776654
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=1.1e-38 Score=344.28 Aligned_cols=462 Identities=14% Similarity=0.185 Sum_probs=336.4
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhh
Q 043156 22 HGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGS 101 (578)
Q Consensus 22 ~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 101 (578)
++|||.++.+++.+++|+++||++.++++.|+++++|++.++++++.+.+.....+..+++|+++||++||||+++++.+
T Consensus 10 ~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~ 89 (489)
T PRK10207 10 LQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAI 89 (489)
T ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999993399999999999
Q ss_pred hhccCCcccccCCCCCccccccch-hHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHH
Q 043156 102 VEFLPPPCNVFDPTAGCKKIEGSD-AALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIG 180 (578)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG 180 (578)
++.++.+++ ....+ ...++++|.++++|.|...|+..++++|++|+++ ++|+++++++|++.|+|
T Consensus 90 ~~~~g~~~~----------~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~----~~~~~~~~~~~~~~nig 155 (489)
T PRK10207 90 VLAIGYFMT----------GMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKD----PRLDGAFTLFYMSINIG 155 (489)
T ss_pred HHHHHHHHH----------HHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCc----hhhhcchhHHHHHHHHH
Confidence 999876664 22222 3345689999999999999999999999999876 24788999999999999
Q ss_pred HHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceec--CCCCcchHHHHHHHHHH-------HHHhcccCC
Q 043156 181 GAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQ--VVQGSSVLIEIIQVYVA-------AIRNRKLEL 251 (578)
Q Consensus 181 ~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 251 (578)
+.+||.+++++.+++||++.|++.++..+++++.+.+.++++++. +|++ ++. |..+.+.. .....+...
T Consensus 156 ~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-d~~~~~l~~~~~~~~~~~~~~~~~ 233 (489)
T PRK10207 156 SLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDH-KPM-SFSKLLLVLLGSVVMIFVCAWLMH 233 (489)
T ss_pred HHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCc-cch-hhhhHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998776666666655555444332 2222 221 21111110 000000000
Q ss_pred CCCchhhhhhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHH
Q 043156 252 PEDPMELYEINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIV 331 (578)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 331 (578)
.......... ............. ..+.+ ..++++.+..+.++...+.
T Consensus 234 ~~~~~~~~~~-----------------~~~~i~~~~f~~~---------------~~~~~-~~~r~r~~~~~~l~~~~~~ 280 (489)
T PRK10207 234 NVEVANLVLI-----------------VLSIVVTIIFFRE---------------AFKLD-KTGRNKMFVAFVLMLEAVV 280 (489)
T ss_pred hhhHHHHHHH-----------------HHHHHHHHHHHHH---------------HhcCC-HHHHHHHHHHHHHHHHHHH
Confidence 0000000000 0000000000000 00001 2345666666677788999
Q ss_pred HHHhhhccchhhhhhhc-cCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHH
Q 043156 332 MTLCLAQLQTFSIQQGL-TMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVL 410 (578)
Q Consensus 332 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~ 410 (578)
+|+++.|..+.+..+.. +.++... ++.+++++++++|++.++++.|+.+++.+|+.+|. ..++...++.+|+++
T Consensus 281 f~~~~~q~~~~l~l~~~~~~~~~~~-G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~----~~~~~~~k~~~G~~l 355 (489)
T PRK10207 281 FYILYAQMPTSLNFFAINNVHHEIL-GFSINPVSFQALNPFWVVVASPILAGIYTHLGSKG----KDLSMPMKFTLGMFL 355 (489)
T ss_pred HHHHHHHcccHHHHHHHHhcccccc-ceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCC----CCCCcHHHHHHHHHH
Confidence 99999999765544443 4555555 78888899999999999999999999988887763 456888999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHH
Q 043156 411 SCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLW 490 (578)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~ 490 (578)
.+++++.++...... . +.....+.+|+++.+++.++||++.+|+.++++++.+|++++|.++|+++
T Consensus 356 ~~~~~~~~~~~~~~~---~-----------~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~ 421 (489)
T PRK10207 356 CSLGFLTAAAAGMWF---A-----------DAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWF 421 (489)
T ss_pred HHHHHHHHHHHHHhh---c-----------CCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHH
Confidence 999987765433111 0 01124578899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhccccccc
Q 043156 491 CSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYNYR 559 (578)
Q Consensus 491 ~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~ 559 (578)
+.+++|+.+|..+...+..... ..++. .....|..+|...++.++++.++++++.++.++.
T Consensus 422 l~~~ig~~lg~~l~~~~~~~~~---~~~~~-----~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~ 482 (489)
T PRK10207 422 LTQAAAFLLGGYVATFTAVPDN---ITDPL-----ETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNRM 482 (489)
T ss_pred HHHHHHHHHHHHHHHHhccccc---cccch-----hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988876531000 00011 0123467889999999998888888877766543
No 4
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=1.9e-38 Score=337.62 Aligned_cols=466 Identities=14% Similarity=0.166 Sum_probs=330.8
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhh
Q 043156 23 GGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSV 102 (578)
Q Consensus 23 ~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~ 102 (578)
+|||.++.+++.++++++++|++..+++.|+++++|++..+++.+.+.+.....++++++|+++||++||||+++++.++
T Consensus 6 ~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 6 SQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999977999999999998
Q ss_pred hccCCcccccCCCCCcccccc-chhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHH
Q 043156 103 EFLPPPCNVFDPTAGCKKIEG-SDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGG 181 (578)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~ 181 (578)
.+++.+++ ... .+...++++..+..+|.|...|+.+++++|++|++++ +|+++++++|...|+|+
T Consensus 86 ~~lg~lll----------~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~----~R~sgf~i~Y~~~nlG~ 151 (493)
T PRK15462 86 MAIGHVVL----------GASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDP----RRDGGFSLMYAAGNVGS 151 (493)
T ss_pred HHHHHHHH----------HHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCc----cccceehHHHHHHHHHH
Confidence 88765443 111 1223345566667788888889889999999998752 59999999999999999
Q ss_pred HHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHH--HHHH----HHHHHHHhcccCCCCCc
Q 043156 182 AISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLI--EIIQ----VYVAAIRNRKLELPEDP 255 (578)
Q Consensus 182 ~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~ 255 (578)
.++|.+.+++.+++||++.|.++++..+++++.++..++++.+..+.+.++.. +... .+....--. +
T Consensus 152 ~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 224 (493)
T PRK15462 152 IIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVAT-------P 224 (493)
T ss_pred HHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHH-------H
Confidence 99999999999989999999998877777776666655544332110001110 0000 000000000 0
Q ss_pred hhhhhhchhhhhhhhcccCCCCCccchhhH-hhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHH
Q 043156 256 MELYEINMDKEAAIETEFLPHRDIFRFLDK-AAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTL 334 (578)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 334 (578)
..... ... + ......-. ...... .+.+.. .+ .. ...+||||+...+.++...++||+
T Consensus 225 ~~~~~--~~~----------~-~~~~~~~~~~~~~~~-~~~~~~------~~-~~-~~~~er~r~~~~~~l~~~~~~Fw~ 282 (493)
T PRK15462 225 ALITV--LFW----------K-EWSVYALIVATIIGL-GVLAKI------YR-KA-ENQKQRKELGLIVTLTFFSMLFWA 282 (493)
T ss_pred HHHHH--HHH----------H-HHHHHHHHHHHHHHH-HHHHHH------HH-hc-CCHHHHhhHHHHHHHHHHHHHHHH
Confidence 00000 000 0 00000000 000000 000000 00 00 134678899899999999999999
Q ss_pred hhhccchhhhhhh-ccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHH
Q 043156 335 CLAQLQTFSIQQG-LTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCI 413 (578)
Q Consensus 335 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~ 413 (578)
.+.|.++.+.... .+.|++++ ++++|+++++++|++.+++++|+..++..++.||. +.++.+.|+.+|++++++
T Consensus 283 ~~~Q~~~sl~lfa~~~vd~~~~-g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~----~~~s~~~Kfa~g~~~~g~ 357 (493)
T PRK15462 283 FAQQGGSSISLYIDRFVNRDMF-GYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGN----RTVRIWGKFALGLGLMSA 357 (493)
T ss_pred HHHHhhHHHHHHHHHhccchhc-ceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCC----CCCCcHHHHHHHHHHHHH
Confidence 9999997543333 47888888 89999999999999999999999999987775542 246899999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHH
Q 043156 414 SMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSM 493 (578)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~ 493 (578)
+++++.+..... + +....+.+|++..++++++||.+.+|..++++.+.+|++.||++||+|.+..
T Consensus 358 ~f~~l~~~~~~~----~-----------~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~ 422 (493)
T PRK15462 358 GFCILTLSARWS----A-----------MYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLS 422 (493)
T ss_pred HHHHHHHHHhhc----C-----------CCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 999887755211 1 1124789999999999999999999999999999999999999999998854
Q ss_pred -HHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHH-HH-HHhhhccccc
Q 043156 494 -ALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFIN-FS-VYLFMSSRYN 557 (578)
Q Consensus 494 -~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~-~i-~~~~~~~~~~ 557 (578)
.+|+.++..+.......+.. .+. -. +-+..+|..+|...+.+.+++ .+ .+..+++..|
T Consensus 423 ~~~~~~~~g~~~~~~~~~~~~--~~~-~~---~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 483 (493)
T PRK15462 423 GAIANYLAGVIADQTSQASFD--ASG-AI---NYSINAYIEVFDQITWGALACVGVVLMIWLYQALK 483 (493)
T ss_pred HHHHHHHHHHHHHHhccccCC--ccc-cc---cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68888888777765321100 000 00 001235777888888877766 43 3444444333
No 5
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=9.9e-38 Score=336.43 Aligned_cols=449 Identities=18% Similarity=0.178 Sum_probs=334.0
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhh
Q 043156 22 HGGIKTSLLILAAFGFENLATIALGVNLVTYFNGV--LHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLIS 99 (578)
Q Consensus 22 ~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~--lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~ 99 (578)
.+|||.++.+++.++++++++|++.++++.|++++ +|++..+++++.+.+.+++.++++++|+++||++||||+++++
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence 46899999999999999999999999999999988 9999999999999999999999999999999933999999999
Q ss_pred hhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHH
Q 043156 100 GSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCI 179 (578)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~l 179 (578)
.++.+++.++. ....+...++++|.+.++|.|...|+..++++|++|+++. ++|+++++++|.+.|+
T Consensus 86 ~~~~~~g~~~~----------~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~---~~r~~~~~~~~~~~ni 152 (475)
T TIGR00924 86 GIVLMLGHFML----------AMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDM---PRRDGGFTLFYMSINI 152 (475)
T ss_pred HHHHHHHHHHH----------HhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCc---ccccceehhHHHHHHH
Confidence 99988776554 3344566788899999999999999999999999997642 2489999999999999
Q ss_pred HHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHH----HH-HH------HHHHHHHhcc
Q 043156 180 GGAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLI----EI-IQ------VYVAAIRNRK 248 (578)
Q Consensus 180 G~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~------~~~~~~~~~~ 248 (578)
|..+||.+++++.+++||++.|++.++..+++.+.+.+.++.+++.++++ ++.. +. .+ .+....+..+
T Consensus 153 G~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (475)
T TIGR00924 153 GSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVP-DPLSGQGKTYGKLLLALLAALALVFFCAW 231 (475)
T ss_pred HHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCC-CCcchhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999889999999988776666666655555443322211 1110 00 00 0000000000
Q ss_pred cCCCCCchhhhhhchhhhhhhhcccCCCCCccchhhH----hhhhccCccccccccCCCCCccccchhhhhHHHHHhHHH
Q 043156 249 LELPEDPMELYEINMDKEAAIETEFLPHRDIFRFLDK----AAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIP 324 (578)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 324 (578)
.. .+......... +...... .....+ . ....++++..+.+.
T Consensus 232 ~~------------------------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~----~-~~~~~~~~~~~~l~ 276 (475)
T TIGR00924 232 LM------------------------HHVVIANILLMTVTLAVIIFFF------RLAFKP----R-LDAVARNKMYAYIV 276 (475)
T ss_pred HH------------------------hccHHHHHHHHHHHHHHHHHHH------HHHHhc----c-CCHHHHhHHHHHHH
Confidence 00 00000000000 0000000 000001 0 11233455556788
Q ss_pred HHHHHHHHHHhhhccchhhh-hhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhh
Q 043156 325 IFCCTIVMTLCLAQLQTFSI-QQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQR 403 (578)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~ 403 (578)
+++...++|+.+.|..+.+. ++..+++.+++ +++++++++.++|++.+++++|+.+++..++.||. ..++...|
T Consensus 277 l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~-~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~----~~~~~~~k 351 (475)
T TIGR00924 277 LFLEAVVFWVLYAQMPTSLNFFADNNMHHEML-GMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKG----KDPTTPLK 351 (475)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHhcccccc-ceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCC----CCCCcHHH
Confidence 88999999999999988654 33345677766 78899999999999999999999988766666552 23467778
Q ss_pred HhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhH
Q 043156 404 VGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKS 483 (578)
Q Consensus 404 ~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg 483 (578)
+.+|+++.+++++.+++..... ++..+.+++|+++++++.++||.+..|..++++++.+|+++||
T Consensus 352 ~~~G~~l~~~~~~~~~~~~~~~---------------~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g 416 (475)
T TIGR00924 352 FTLGMLFCGASFLTFAASIWFA---------------DAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMG 416 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhhc---------------CCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHH
Confidence 8999999999998887653110 1123579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhccccc
Q 043156 484 LSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYN 557 (578)
Q Consensus 484 ~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~ 557 (578)
+++|++.+...+|+.+++.+.+.... ..++..+|...++++++..++++++.++.+
T Consensus 417 ~~~g~~~l~~~~g~~l~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (475)
T TIGR00924 417 QMLGMWFLAQAMGSLLGGYLATFGAV------------------PQGVTGVFGKIGLVTLLVGVVMALMVPWLN 472 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc------------------ccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988775431 123446788888888888888877777654
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=2e-36 Score=328.15 Aligned_cols=457 Identities=14% Similarity=0.199 Sum_probs=330.7
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhh
Q 043156 22 HGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGS 101 (578)
Q Consensus 22 ~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 101 (578)
.+|||.++.+++.++++++++|++.++++.|+++++|++.++++++.+.+........+++|+++||++|||+++.++.+
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~ 96 (500)
T PRK09584 17 FKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAI 96 (500)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence 46889999999999999999999999999999999999999999999988877778888999999993399999999999
Q ss_pred hhccCCcccccCCCCCcccccc-chhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHH
Q 043156 102 VEFLPPPCNVFDPTAGCKKIEG-SDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIG 180 (578)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG 180 (578)
+.+++.+++ ... .+...++++|+++++|.|...|+..++++|++|+++ ++|+++++++|.+.|+|
T Consensus 97 ~~~ig~~l~----------~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~----~~~~~~~~~~~~~~~iG 162 (500)
T PRK09584 97 VLAIGYALV----------AWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDD----PRLDGAFTMYYMSINIG 162 (500)
T ss_pred HHHHHHHHH----------HHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCc----hhhhhcchHHHHHHHHH
Confidence 888775553 222 234566788999999999999999999999998765 24677899999999999
Q ss_pred HHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceec--CCCCcchHH------HHHHHHHHHHHhccc-CC
Q 043156 181 GAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQ--VVQGSSVLI------EIIQVYVAAIRNRKL-EL 251 (578)
Q Consensus 181 ~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~~~~~~~~~-~~ 251 (578)
+.+||.+++++.+++||++.|++.++..+++++.++..++.+++. +|++ ++.+ ...++........+. ..
T Consensus 163 ~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (500)
T PRK09584 163 SFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDF-EPINYRKLLLTIVGVVALIAIATWLLHN 241 (500)
T ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCc-cccchhhHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999998876666655544444333222 1221 1111 111111111111100 00
Q ss_pred CCCchhhhhhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHH
Q 043156 252 PEDPMELYEINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIV 331 (578)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 331 (578)
++..... .............. .. +. ....++++.+..+.++...+.
T Consensus 242 ~~~~~~~---------------------~~~~~~~~~~~~~~---------~~---~~-~~~~~~~~~~~~~~~~~~~i~ 287 (500)
T PRK09584 242 QEIARMA---------------------LGVVALGIVVIFGK---------EA---FA-MKGAARRKMIVAFILMLEAII 287 (500)
T ss_pred chHHHHH---------------------HHHHHHHHHHHHHH---------HH---hh-cCHHHHHHHHHHHHHHHHHHH
Confidence 0000000 00000000000000 00 00 123456666666777888899
Q ss_pred HHHhhhccchhhhhhhc-cCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHH
Q 043156 332 MTLCLAQLQTFSIQQGL-TMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVL 410 (578)
Q Consensus 332 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~ 410 (578)
||+.+.|.++.+..+.. +.++++. ++.++++++.++|++.+++++|+.+++..|+.+| ++..+++.+|+++
T Consensus 288 f~~~~~q~~~~l~~~~~~~~~~~~~-g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r-------~~~~~~~~~G~~l 359 (500)
T PRK09584 288 FFVLYSQMPTSLNFFAIRNVEHSIL-GIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDR-------LPMPHKFAIGMVL 359 (500)
T ss_pred HHHHHHHhccHHHHHHHHhcccccc-ceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcC-------CCcHHHHHHHHHH
Confidence 99999999988766543 3555555 7788899999999999999999999887666665 2567899999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHH
Q 043156 411 SCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLW 490 (578)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~ 490 (578)
++++++.+...... .+ +...++.+|+++.+++.++||++.+|...+++++.+|+++||+++|++.
T Consensus 360 ~~l~f~~l~~~~~~----~~-----------~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~ 424 (500)
T PRK09584 360 CSGAFLVLPLGAKF----AN-----------DAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWF 424 (500)
T ss_pred HHHHHHHHHHHHHh----cC-----------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 99999988775421 11 1235778899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCC-cchhHHHHHHHHHHHHHHHHHHhhhccccccc
Q 043156 491 CSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNIN-RNHLNLFFWLLSALSFINFSVYLFMSSRYNYR 559 (578)
Q Consensus 491 ~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~ 559 (578)
+...+|+.++..+.+.+..- +-.. +... .+++..+|..+++++++..++.+...++.++.
T Consensus 425 l~~a~g~~~~g~~~~~~~~~--------~~~~-~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k~ 485 (500)
T PRK09584 425 LTTAGAALIAGYVANLMAVP--------DNVT-DPLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNRM 485 (500)
T ss_pred HHHHHHHHHHHHHHHHhccc--------cccc-cchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998887644210 0000 1111 13477889999988888777777777766544
No 7
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.97 E-value=2.5e-28 Score=268.60 Aligned_cols=336 Identities=25% Similarity=0.416 Sum_probs=270.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCcc
Q 043156 40 LATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCK 119 (578)
Q Consensus 40 ~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (578)
++||++...+..|+.+.+|++.+.+..+.+.+.....+.++++|+++|+++||+|++.++.++..+|..++.+++.+..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~- 79 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSS- 79 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCccc-
Confidence 4689999999999999999999999999999999999999999999999999999999999998877665422111000
Q ss_pred ccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccc-----
Q 043156 120 KIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDN----- 194 (578)
Q Consensus 120 ~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~----- 194 (578)
.........+++..+.++|.|+..|+..++.+|++++++. ++|.++++++|++.|+|+.+++.+.+++.+.
T Consensus 80 -~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~---~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg 155 (654)
T TIGR00926 80 -GHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL---SLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFG 155 (654)
T ss_pred -ccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 0012234467888999999999999999999999987542 3589999999999999999999999999743
Q ss_pred --cCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhcc
Q 043156 195 --KGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIETE 272 (578)
Q Consensus 195 --~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (578)
.+|...|.+++++.+++++++...++++++.+|.+ +++.+..+++..+.+++....+++.
T Consensus 156 ~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~g-s~l~~v~~vi~~a~~~~~~~~~~~~----------------- 217 (654)
T TIGR00926 156 CQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKG-NIVSKVIKCIVTALRKRFSTRSEHW----------------- 217 (654)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCc-cHHHHHHHHHHHHHHHhhccCCccc-----------------
Confidence 36999999999999999988888888887777766 7777777887777765543221110
Q ss_pred cCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccchhhhhhhccCCC
Q 043156 273 FLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQTFSIQQGLTMDT 352 (578)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (578)
..+|++.+..+. ..+.++++|++++.+++++..+.+|.++.|..+.+..|...++.
T Consensus 218 ------~~~~ld~a~~~~------------------~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~m~~ 273 (654)
T TIGR00926 218 ------PLHWLDYAKDKH------------------DIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRMDG 273 (654)
T ss_pred ------chhHHHHhcccc------------------ccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhcC
Confidence 023333332211 12357889999999999999999999999999998888888888
Q ss_pred CCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHH
Q 043156 353 SVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRK 426 (578)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~ 426 (578)
+++ ++.+++++++.+|++.++++.|+.+..+.+..+|.+ ..++++.++.+|+++++++++++...+..+.
T Consensus 274 ~l~-g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~---~~ls~l~k~~iG~~la~la~~va~~ve~~~~ 343 (654)
T TIGR00926 274 DVG-GFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCG---TRFTSLRKMAVGGLLAALSFFVAALVQLKVN 343 (654)
T ss_pred ccC-CEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcC---CCCChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 777 788999999999999999999999976666666642 3468899999999999999999888776543
No 8
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.95 E-value=1.3e-25 Score=237.50 Aligned_cols=378 Identities=13% Similarity=0.010 Sum_probs=257.2
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhh
Q 043156 24 GIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVE 103 (578)
Q Consensus 24 ~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~ 103 (578)
..|.+..++...++..++.....+.++.|+++++|.|..+.+++.+.+.++..++.++.|+++||+ ||||++.++.++.
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~ 91 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGC 91 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHH
Confidence 356777788889999999888899999999999999999999999999999999999999999998 9999999998877
Q ss_pred ccCCcccccCCCCCccc-cccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHH
Q 043156 104 FLPPPCNVFDPTAGCKK-IEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGA 182 (578)
Q Consensus 104 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~ 182 (578)
.++.++..+ ..... ....+...+++.|+++|++.+...++..+++.|++|+++ |+++++++..+.++|..
T Consensus 92 ~~~~~~~~~---~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~ 162 (399)
T PRK05122 92 ALSGLLYLL---AGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH------TGRVISWNGIATYGALA 162 (399)
T ss_pred HHHHHHHHH---hhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh------hccchhhhhhhhhHHHH
Confidence 644332100 00000 001246678999999999999999999999999999886 99999999999999999
Q ss_pred HHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhc
Q 043156 183 ISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEIN 262 (578)
Q Consensus 183 ~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (578)
++|.+++++.+.+||++.+++.++..++..+.. .+ .+++++++ ++ +
T Consensus 163 ~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~-~~-----------------------~------ 208 (399)
T PRK05122 163 IGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA---RP-RPAVPPVK-GE-----------------------R------ 208 (399)
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH---hc-CCCCCCCC-cc-----------------------c------
Confidence 999999999988999998887665543332221 11 11111100 00 0
Q ss_pred hhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHH-HHHHHHHHHHHhhhccch
Q 043156 263 MDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMI-PIFCCTIVMTLCLAQLQT 341 (578)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~ 341 (578)
.++ .+..|+..... ...+....+.......+.
T Consensus 209 ----------------------------------------~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (399)
T PRK05122 209 ----------------------------------------LPF-------RRVLGRVWPYGMGLALASIGFGTIATFITL 241 (399)
T ss_pred ----------------------------------------hhH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 00011111100 111111111111111111
Q ss_pred hhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHH
Q 043156 342 FSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIF 421 (578)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~ 421 (578)
++.+ .+.. ..+.......+..++..++.+++.||..+| +.+..+.++..++++.+...
T Consensus 242 ~~~~------~~~~-----~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~-----------~~~~~~~~~~~~~~~~~~~~ 299 (399)
T PRK05122 242 YYAA------RGWD-----GAALALTLFGVAFVGARLLFGNLINRLGGL-----------RVAIVSLLVEILGLLLLWLA 299 (399)
T ss_pred HHHH------cccc-----cchHHHHHHHHHHHHHHHHHHHHHHHhccH-----------HHHHHHHHHHHHHHHHHHHh
Confidence 1111 1100 112223344566667777888888776655 34566666777666555542
Q ss_pred HHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHH
Q 043156 422 EVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFST 501 (578)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~ 501 (578)
. +.+.+++..++.|++.+...|.......+.+|++.||++.|+++....+|..+++
T Consensus 300 ~------------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~ 355 (399)
T PRK05122 300 P------------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITG 355 (399)
T ss_pred c------------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 3444556678889988888888777888999999999999999999999999999
Q ss_pred HHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccc
Q 043156 502 ILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRY 556 (578)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~ 556 (578)
.+.+.+.+ ..+|+..|+..++++++++++.+++.++.
T Consensus 356 ~~~g~l~~------------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (399)
T PRK05122 356 PLAGLVAS------------------WFGYPSIFLAAALAALLGLALTWLLYRRA 392 (399)
T ss_pred HHHHHHHH------------------HcCHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 88887652 12467788888888888877776654433
No 9
>PRK12382 putative transporter; Provisional
Probab=99.94 E-value=3.8e-25 Score=233.39 Aligned_cols=378 Identities=11% Similarity=-0.002 Sum_probs=252.9
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhh
Q 043156 23 GGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSV 102 (578)
Q Consensus 23 ~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~ 102 (578)
...+.++.+.+..++...+.....+.++.|+.+++|.|.++.|++.+.+.++..++.++.|+++||+ ||||++.++.+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~ 90 (392)
T PRK12382 12 SANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLA 90 (392)
T ss_pred cccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHH
Confidence 3345667777777888888787888899999999999999999999999999999999999999998 999999988776
Q ss_pred hccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHH
Q 043156 103 EFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGA 182 (578)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~ 182 (578)
..++.+.... ..........+...++++|+++|++.+...++..+++.|.+|+++ |+++++++..+.++|..
T Consensus 91 ~~~~~~~~~~--~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~a~~~~~~~~~~g~~ 162 (392)
T PRK12382 91 CGLAGLAYLL--AAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH------SGKVMSWNGMAMYGALA 162 (392)
T ss_pred HHHHHHHHHh--hhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc------cchhhhHHHHHHHHHHH
Confidence 6543221100 000000123567889999999999999988888889999999876 99999999999999999
Q ss_pred HHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhc
Q 043156 183 ISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEIN 262 (578)
Q Consensus 183 ~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (578)
++|.+++++.+.+||++.+.+..+..++.. .+. ++.++.++++ + + +
T Consensus 163 ~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~-~---------------------~-~------- 208 (392)
T PRK12382 163 AGAPLGLLLHSHFGFAALALTTMVLPLLAW---AFN-GTVRKVPAHA-G---------------------E-R------- 208 (392)
T ss_pred HHHHHHHHHHhccChHHHHHHHHHHHHHHH---HHH-HhccCCCCCc-c---------------------c-C-------
Confidence 999999999888899987765544322222 111 1111110000 0 0 0
Q ss_pred hhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHh-HHHHHHHHHHHHHhhhccch
Q 043156 263 MDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILG-MIPIFCCTIVMTLCLAQLQT 341 (578)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~~~~~~~~~~ 341 (578)
.++ .+..|...+ ..........+.......+.
T Consensus 209 ----------------------------------------~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 241 (392)
T PRK12382 209 ----------------------------------------PSL-------WSVVGLIWKPGLGLALQGVGFAVIGTFVSL 241 (392)
T ss_pred ----------------------------------------chH-------HHHHHHHHHhHHHHHHHHHHHhHHHHHHHH
Confidence 000 000000000 00011111111111111111
Q ss_pred hhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHH
Q 043156 342 FSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIF 421 (578)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~ 421 (578)
++ .+ .+.. ..+.......+..++..++.+++.||+++| +.+..+..+..++++.....
T Consensus 242 ~~-~~-----~~~~-----~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~-----------~~~~~~~~~~~~~~~~~~~~ 299 (392)
T PRK12382 242 YF-AS-----KGWA-----MAGFTLTAFGGAFVLMRVLFGWMPDRFGGV-----------KVAIVSLLVETVGLLLLWLA 299 (392)
T ss_pred HH-Hh-----cCCc-----hhHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----------eehHHHHHHHHHHHHHHHHc
Confidence 11 11 1110 112223334555677778888888877766 34556677776666554442
Q ss_pred HHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHH
Q 043156 422 EVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFST 501 (578)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~ 501 (578)
. +.++..+..++.+++.+...|.......+.+|++.||++.|+++....+|+.+++
T Consensus 300 ~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~ 355 (392)
T PRK12382 300 P------------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSG 355 (392)
T ss_pred c------------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 3344555677888888888888888888999999999999999999999999999
Q ss_pred HHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhcc
Q 043156 502 ILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSS 554 (578)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 554 (578)
.+.+.+.+. .+|+..|...+++.++++++.++..+
T Consensus 356 ~~~g~l~~~------------------~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (392)
T PRK12382 356 PLAGMLATS------------------FGYPSVFLAGAISAVLGIIVTILSFR 390 (392)
T ss_pred HHHHHHHHH------------------hCchHHHHHHHHHHHHHHHHHHhhcc
Confidence 999887621 23567888888888888877765543
No 10
>PRK03545 putative arabinose transporter; Provisional
Probab=99.94 E-value=2.1e-25 Score=235.28 Aligned_cols=373 Identities=13% Similarity=0.079 Sum_probs=251.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhc
Q 043156 25 IKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEF 104 (578)
Q Consensus 25 ~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~ 104 (578)
+..++.+.+..+......+...+.+ ..+.+++|.|.++.+++.+.+.++..++.++.|+++||+ ||||++.++.++..
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~-~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~ 85 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEFVPVGLL-SDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLFI 85 (390)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHcch-HHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHHH
Confidence 4456666666666544544333334 456789999999999999999999999999999999998 99999999988888
Q ss_pred cCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHH
Q 043156 105 LPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAIS 184 (578)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~ 184 (578)
++.++. ...++++.+++.|+++|++.+...|...+++.|++|+++ |+++++++..+.++|..++
T Consensus 86 ~~~~~~----------~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~g~~~~~~~~g~~ig 149 (390)
T PRK03545 86 ASHVLS----------ALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK------KAQALSLLATGTALAMVLG 149 (390)
T ss_pred HHHHHH----------HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh------hhhHHHHHHHHHHHHHHHH
Confidence 665553 445788899999999999999888999999999999876 9999999999999999999
Q ss_pred HHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchh
Q 043156 185 VTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMD 264 (578)
Q Consensus 185 p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (578)
|.+++.+.+++|||+.|++.+++.++..+..+...++.+++ ++ ++..+
T Consensus 150 ~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~--~~-~~~~~----------------------------- 197 (390)
T PRK03545 150 LPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSE--HS-GSLKS----------------------------- 197 (390)
T ss_pred hhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCC--Cc-chHHH-----------------------------
Confidence 99999999888999999998877655544433322221110 00 00000
Q ss_pred hhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHh-HHHHHHHHHHHHHhhhccchhh
Q 043156 265 KEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILG-MIPIFCCTIVMTLCLAQLQTFS 343 (578)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~ 343 (578)
. . +..++ +.... ....++.....+......++++
T Consensus 198 -----------------~---~------------------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l 232 (390)
T PRK03545 198 -----------------L---P------------------------LLFRR-PALVSLYLLTVVVVTAHFTAYSYIEPFV 232 (390)
T ss_pred -----------------H---H------------------------HHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00000 11111 1111111112222222222222
Q ss_pred hhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHH
Q 043156 344 IQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEV 423 (578)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~ 423 (578)
.++ .+.+. ...+.+.....+..++..++.+++.||..+| .+.++..+..+++.......
T Consensus 233 ~~~-~g~s~-------~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~------------~~~~~~~~~~~~~~~l~~~~- 291 (390)
T PRK03545 233 QQV-AGLSE-------NFATLLLLLFGGAGIIGSVLFSRLGNRHPSG------------FLLIAIALLLVCLLLLLPAA- 291 (390)
T ss_pred HHh-cCCCc-------cHHHHHHHHHHHHHHHHHHHHHHHhhccchh------------HHHHHHHHHHHHHHHHHHHh-
Confidence 111 11111 1123344445566777777788887665443 34455555555544332221
Q ss_pred HHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 043156 424 IRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTIL 503 (578)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~ 503 (578)
.+.+.++...++.|++.....+.....+.+..| +.||+++|+.+....+|..+|+.+
T Consensus 292 ----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~ 348 (390)
T PRK03545 292 ----------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALL 348 (390)
T ss_pred ----------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHH
Confidence 134455566777788877777777777878877 578999999999999999999999
Q ss_pred HHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhcc
Q 043156 504 VNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSS 554 (578)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 554 (578)
.|.+.+. .+++..|+..+.+.++++++++...+
T Consensus 349 ~G~~~~~------------------~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 349 GNQVSLH------------------LGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHhc------------------cChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 9987621 24567899999999998888877765
No 11
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.94 E-value=2.1e-25 Score=236.03 Aligned_cols=380 Identities=14% Similarity=0.075 Sum_probs=252.8
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhh
Q 043156 21 KHGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISG 100 (578)
Q Consensus 21 ~~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~ 100 (578)
.++.+| ++++...++...+.+.+.++++.|+++++|+|..+.|.+.+...+...+..+++|+++||+ |||+++.++.
T Consensus 7 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~ 83 (400)
T PRK11646 7 ARNLGK--YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGM 83 (400)
T ss_pred cccccH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHH
Confidence 345566 6677889999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred hhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHH
Q 043156 101 SVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIG 180 (578)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG 180 (578)
++..++.++. ...++.+.+++.|++.|++.+...|+..+++.|.+|+++ |++++++++...++|
T Consensus 84 ~~~~~~~~~~----------~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~a~~~~~~~~~~g 147 (400)
T PRK11646 84 LMRAAGFATM----------AIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ------RGRFFSLLMMQDSAG 147 (400)
T ss_pred HHHHHHHHHH----------HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHH
Confidence 8888665543 334577888899999999999888999999999999876 999999999999999
Q ss_pred HHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhh
Q 043156 181 GAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYE 260 (578)
Q Consensus 181 ~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (578)
..+||.+++++. .++|++.|++.++..++..+...+..++.+. ++.. ++. .
T Consensus 148 ~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~-~~~~-~~~--------------------------~ 198 (400)
T PRK11646 148 AVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKL-STVR-TPV--------------------------R 198 (400)
T ss_pred HHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcccc-cccc-hhh--------------------------H
Confidence 999999999998 6799999998877655554433332221100 0000 000 0
Q ss_pred hchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhcc-
Q 043156 261 INMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQL- 339 (578)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~- 339 (578)
..++ +..++++ ....... ...++....+.
T Consensus 199 ------------------------------------------~~~~----~~~~~~~-~~~~~~~---~~~~~~~~~~~~ 228 (400)
T PRK11646 199 ------------------------------------------EGMT----RVLRDKR-FVTYVLT---LTGYYMLAVQVM 228 (400)
T ss_pred ------------------------------------------HHHH----HHHcCch-HHHHHHH---HHHHHHHHHHHH
Confidence 0000 0001111 1111111 11111111111
Q ss_pred --chhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHH
Q 043156 340 --QTFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAI 417 (578)
Q Consensus 340 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~ 417 (578)
.+.+..+..+.+ ...+.+.+.+.+..+.+....+++.++ |. +..+.+..+.++.+++++.
T Consensus 229 ~~~p~~~~~~~~~~--------~~~g~l~~~~~~~~~~~~~~~~~~~~~---r~-------~~~~~~~~~~~~~~~~~~~ 290 (400)
T PRK11646 229 LMLPIMVNDIAGSP--------SAVKWMYAIEACLSLTLLYPIARWSEK---RF-------RLEHRLMAGLLIMSLSMFP 290 (400)
T ss_pred HhhhhhHHhhcCCc--------hHHHHHHHHHHHHHHHHHHHHHHHHHH---hc-------chhHHHHHHHHHHHHHHHH
Confidence 122212111101 111223333333333333333444432 21 1123566677777777766
Q ss_pred HHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHH
Q 043156 418 AAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGY 497 (578)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~ 497 (578)
++... +.++++...++.+++.+...|...+++.+.+|++.||+++|+.+....+|.
T Consensus 291 l~~~~------------------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~ 346 (400)
T PRK11646 291 IGMVS------------------------NLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGG 346 (400)
T ss_pred HHHhh------------------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHH
Confidence 55433 233444455677888888889999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhcc
Q 043156 498 FFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSS 554 (578)
Q Consensus 498 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 554 (578)
.+|+.+.+.+.+.+.+ .+.....|+..+++++++.+......+
T Consensus 347 ~ig~~l~G~l~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (400)
T PRK11646 347 AIGYIGGGWLFDLGKA--------------LNQPELPWMMLGIIGLITLLALYWQFS 389 (400)
T ss_pred HhcccchHHHHHHHhh--------------cCCcchHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999988743310 011234566667777777666554333
No 12
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.94 E-value=6.6e-25 Score=232.55 Aligned_cols=387 Identities=16% Similarity=0.079 Sum_probs=251.7
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhh
Q 043156 22 HGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGS 101 (578)
Q Consensus 22 ~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 101 (578)
+.++..+.+..+..+.+.+..+......+ .+.+++|+|..+.+++.+.+.++..++.++.|+++||+ ||||++.++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 88 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAP-RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVA 88 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHH
Confidence 34555666666677777777666555554 56788999999999999999999999999999999998 99999999988
Q ss_pred hhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHH
Q 043156 102 VEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGG 181 (578)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~ 181 (578)
+..++.++. ....++..+++.|++.|++.+...+...+++.|++|+++ |++++++.+.+.++|.
T Consensus 89 ~~~~~~~~~----------~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~ 152 (406)
T PRK11551 89 LFGLFSLAT----------AQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL------RGTAVSLMYCGVPFGG 152 (406)
T ss_pred HHHHHHHHH----------HHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHH
Confidence 777554432 334678888999999999999999999999999999876 9999999999999999
Q ss_pred HHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhh
Q 043156 182 AISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEI 261 (578)
Q Consensus 182 ~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (578)
.++|.+++.+.+..+|++.|++.+++.++..+......++.++.++++ . . .+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~------------------~-~~~------- 205 (406)
T PRK11551 153 ALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAA-G------------------A-GKQ------- 205 (406)
T ss_pred HHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhcc-C------------------c-chh-------
Confidence 999999999988889999999877665444433333222211100000 0 0 000
Q ss_pred chhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccch
Q 043156 262 NMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQT 341 (578)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~ 341 (578)
.....+.. + +..+.++........+.....++....+.+.
T Consensus 206 -----------------~~~~~~~~------------------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 245 (406)
T PRK11551 206 -----------------RAPVLRAL------------------F-----GEGRATATLLLWISYFFTLIVLYFLLNWLPS 245 (406)
T ss_pred -----------------hhhhHHHH------------------h-----hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000 0 0000111111111111112222222222222
Q ss_pred hhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHH
Q 043156 342 FSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIF 421 (578)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~ 421 (578)
+... .+.+ ....+.+.....+..++...+.+++.||+++| +.+.++.+...++++.....
T Consensus 246 ~~~~--~g~s-------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----------~~~~~~~~~~~~~~~~~~~~ 305 (406)
T PRK11551 246 LLVG--QGLS-------RSQAGLVQIAFNIGGALGSLLIGALMDRLRPR-----------RVVLLIYAGILASLAALAAA 305 (406)
T ss_pred HHHh--CCCC-------hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHH-----------HHHHHHHHHHHHHHHHHHhc
Confidence 2211 1111 11233445555667778888888888887766 23344444444444433331
Q ss_pred HHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHH
Q 043156 422 EVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFST 501 (578)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~ 501 (578)
. +.+.+.+..++.+++.....+...++..+.+|++.||++.|+.+....+|+.+++
T Consensus 306 ~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~ 361 (406)
T PRK11551 306 P------------------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGP 361 (406)
T ss_pred C------------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHh
Confidence 1 3334445556677777777888889999999999999999999999999999999
Q ss_pred HHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhcc
Q 043156 502 ILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSS 554 (578)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 554 (578)
.+.+.+.+.. +.+...++..+.+.+++.+..+...+
T Consensus 362 ~~~g~l~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (406)
T PRK11551 362 LLAGQLLALG-----------------RSTVGVIGASIPVILVAALAALLLVS 397 (406)
T ss_pred hhHhhhhccC-----------------CchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9998876311 22345566666666666666555443
No 13
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.94 E-value=1e-24 Score=243.03 Aligned_cols=155 Identities=14% Similarity=0.051 Sum_probs=130.6
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccch
Q 043156 46 GVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSD 125 (578)
Q Consensus 46 ~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (578)
...+.+++.+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++++++++.+++.++. ....+
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~----------afa~s 254 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFS----------SFVQG 254 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHH----------HHHhh
Confidence 34455677889999999999999999999999999999999998 99999999988888665553 34567
Q ss_pred hHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccc-----------
Q 043156 126 AALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDN----------- 194 (578)
Q Consensus 126 ~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~----------- 194 (578)
+..++++|++.|++.|+..|...++++|++|++. |++.++++.....+|.++++.++.++..+
T Consensus 255 ~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~------Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~ 328 (742)
T TIGR01299 255 YGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK------RGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAY 328 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhcccccc
Confidence 8889999999999999999999999999999876 99999999999999999999887665432
Q ss_pred --cCchhHHHHHHHHHHHHHHHHHh
Q 043156 195 --KGWDRGFGLSSVAVFLATIIFAA 217 (578)
Q Consensus 195 --~g~~~~f~i~~~~~~~~~~~~~~ 217 (578)
.+||+.|++.++..++.++..++
T Consensus 329 ~~~gWR~l~~i~~lp~ll~ll~~~~ 353 (742)
T TIGR01299 329 QFHSWRVFVIVCAFPCVFAIGALTF 353 (742)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHH
Confidence 36899888887776666554444
No 14
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.94 E-value=1.6e-24 Score=235.57 Aligned_cols=402 Identities=13% Similarity=0.067 Sum_probs=251.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhc
Q 043156 25 IKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEF 104 (578)
Q Consensus 25 ~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~ 104 (578)
+..+..+++..++..+..-.+.+.+| .+.+++|.+.++.+|+.+.+.++..++.++.|+++||+ |||+++.++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p-~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~ 82 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAP-TLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFG 82 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence 44566777777777777666666665 45689999999999999999999999999999999998 99999999999998
Q ss_pred cCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHH
Q 043156 105 LPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAIS 184 (578)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~ 184 (578)
++.+++ ...++.+.++++|+++|+|.+...|.....+.+.+++++ +|+++++++....++|..+|
T Consensus 83 ~~~~~~----------~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~-----~r~~~~g~~~~~~~~g~~~g 147 (495)
T PRK14995 83 LASLAA----------AFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEK-----QRNMALGVWAAVGSGGAAFG 147 (495)
T ss_pred HHHHHH----------HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH-----HHHHHHHHHHHHHHHHHHHH
Confidence 776664 456788999999999999999988888887877775432 39999999999999999999
Q ss_pred HHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHH---HHH--HHHHHHhcccCCCCCchhhh
Q 043156 185 VTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEI---IQV--YVAAIRNRKLELPEDPMELY 259 (578)
Q Consensus 185 p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~ 259 (578)
|.+++++.+++|||+.|++...+.++.+++.....++.+.+++++....... ... +....++.............
T Consensus 148 p~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 227 (495)
T PRK14995 148 PLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSL 227 (495)
T ss_pred HHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHH
Confidence 9999999999999999999887766655554444443222111110111100 000 01111100000000000000
Q ss_pred hhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHH-HHHHHHHHHHHhhhc
Q 043156 260 EINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMI-PIFCCTIVMTLCLAQ 338 (578)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~ 338 (578)
.. .............+. ....|... .+-.++ |...... ..++....++. ...
T Consensus 228 ~~-----------------~~~~~~l~~f~~~e~------~~~~p~~~--~~lf~~-~~~~~~~~~~~~~~~~~~~-~~~ 280 (495)
T PRK14995 228 TL-----------------LTGALLLGLFIRTQL------AASRPMID--MRLFTH-RIILSGVVMAMTAMITLVG-FEL 280 (495)
T ss_pred HH-----------------HHHHHHHHHHHHHHh------cCCCCCcC--HHHhCC-cccHHHHHHHHHHHHHHHH-HHH
Confidence 00 000000000000000 00112110 001111 1111111 11111111111 111
Q ss_pred cchhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHH
Q 043156 339 LQTFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIA 418 (578)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~ 418 (578)
+.+.+.+...+.+ ....+.......+...+..++.+++.||+++| +.+..|+++..++++.+
T Consensus 281 ~~~~~lq~v~g~s-------~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~-----------~~~~~g~~~~~~~~~~l 342 (495)
T PRK14995 281 LMAQELQFVHGLS-------PLEAGMFMLPVMVASGFSGPIAGILVSRLGLR-----------LVATGGMALSALSFYGL 342 (495)
T ss_pred HHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----------HHHHHHHHHHHHHHHHH
Confidence 1122222211211 12233444555677888889999998877765 35566887777777655
Q ss_pred HHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHH
Q 043156 419 AIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYF 498 (578)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~ 498 (578)
.... ...+.+......++.|+|.+...++....+.+.+|++.+|.+.+++++.+++|+.
T Consensus 343 ~~~~---------------------~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~ 401 (495)
T PRK14995 343 AMTD---------------------FSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAG 401 (495)
T ss_pred HHhc---------------------CCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHH
Confidence 4432 1123344556678889999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhc
Q 043156 499 FSTILVNIVNS 509 (578)
Q Consensus 499 lg~~~~~~~~~ 509 (578)
+|+.+.+.+..
T Consensus 402 ~G~ai~g~i~~ 412 (495)
T PRK14995 402 LGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHH
Confidence 99998887743
No 15
>PRK10504 putative transporter; Provisional
Probab=99.93 E-value=3.1e-24 Score=232.04 Aligned_cols=402 Identities=13% Similarity=0.081 Sum_probs=248.4
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhh
Q 043156 24 GIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVE 103 (578)
Q Consensus 24 ~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~ 103 (578)
+.|..+.+.+..++..+..+.+.+.+|.+. +++|.+..+.+++.+.+.++..++.++.|+++||+ ||||+++.+.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~ 85 (471)
T PRK10504 8 VRWQLWIVAFGFFMQSLDTTIVNTALPSMA-QSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLF 85 (471)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHHHH-HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHH
Confidence 355678888888888888888888887776 57999999999999999999999999999999998 9999999888777
Q ss_pred ccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHH
Q 043156 104 FLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAI 183 (578)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~ 183 (578)
.++.++. ....+...+++.|+++|++.+...|...+++.|.+|+++ |++++++.+...++|..+
T Consensus 86 ~~~~~~~----------~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~ 149 (471)
T PRK10504 86 TLGSLFC----------ALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQ------YMAAMTFVTLPGQVGPLL 149 (471)
T ss_pred HHHHHHH----------HHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHh
Confidence 7554442 234677888999999999999999999999999999775 999999999999999999
Q ss_pred HHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcch--HHHHHHHHHHHH--HhcccCCCCCchhhh
Q 043156 184 SVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSV--LIEIIQVYVAAI--RNRKLELPEDPMELY 259 (578)
Q Consensus 184 ~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 259 (578)
+|.+++++.++.|||+.|++......++.+......++.+.++++.+.. ............ .+.... .-.+....
T Consensus 150 g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 228 (471)
T PRK10504 150 GPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGL-GLSPLAIA 228 (471)
T ss_pred hhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcC-CcchHHHH
Confidence 9999999999899999999987776666555554444332221111011 000111111100 000000 00000000
Q ss_pred hhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHH-HHHHHHHHHhhhc
Q 043156 260 EINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPI-FCCTIVMTLCLAQ 338 (578)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~ 338 (578)
.....- ... ...+..+. +.. . +...+++ ....|.....+.. ++.... ......
T Consensus 229 ~~~~~~-~~~---------~~~~~~~~--~~~-~------~~~~~~~------l~~~~~~~~~l~~~~~~~~~-~~~~~~ 282 (471)
T PRK10504 229 GLVAVG-VVA---------LLLYLLHA--RNN-N------RALFSLK------LFRTRTFSLGLAGSFAGRIG-SGMLPF 282 (471)
T ss_pred HHHHHH-HHH---------HHHHHHHH--hcC-C------CCccCHH------HhcccchHHHHHHHHHHHHH-HHHHHH
Confidence 000000 000 00000000 000 0 0000111 1111121111111 111111 111122
Q ss_pred cchhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHH
Q 043156 339 LQTFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIA 418 (578)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~ 418 (578)
..+++.++..+.+. ...+.......+..+...++.+++.||+++| +.+.+|.++..++.+++
T Consensus 283 ~~~~~~~~~~g~~~-------~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~-----------~~~~~~~~~~~~~~~~~ 344 (471)
T PRK10504 283 MTPVFLQIGLGFSP-------FHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR-----------RVLVATTLGLALVSLLF 344 (471)
T ss_pred HHHHHHHHHcCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----------HHHHHHHHHHHHHHHHH
Confidence 22333332111111 1122333334455566668888888887766 35556666666665544
Q ss_pred HHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHH
Q 043156 419 AIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYF 498 (578)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~ 498 (578)
.... ...+.+++...+++.|++.++..+..+.+..+.+|++.+|.+++++++.+.+|..
T Consensus 345 ~~~~---------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ 403 (471)
T PRK10504 345 MLVA---------------------LLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMS 403 (471)
T ss_pred Hhcc---------------------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHH
Confidence 4321 0112333444567778888888888889999999999999999999999999999
Q ss_pred HHHHHHHhhhc
Q 043156 499 FSTILVNIVNS 509 (578)
Q Consensus 499 lg~~~~~~~~~ 509 (578)
+|+.+.+.+..
T Consensus 404 ig~~i~g~ll~ 414 (471)
T PRK10504 404 IGVTIAGLLLG 414 (471)
T ss_pred HHHHHHHHHHH
Confidence 99999887754
No 16
>PRK10054 putative transporter; Provisional
Probab=99.93 E-value=6.4e-25 Score=231.85 Aligned_cols=355 Identities=12% Similarity=0.091 Sum_probs=237.8
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhh
Q 043156 22 HGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGS 101 (578)
Q Consensus 22 ~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 101 (578)
.+.+|..+.++...++...+++...++++.|+++++|+|..+.|++.+.+.+++.++.++.|+++||+ |||+++.++.+
T Consensus 3 ~~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~ 81 (395)
T PRK10054 3 LSLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAIT 81 (395)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHH
Confidence 34577888899999999999999999999999999999999999999999999999999999999998 99999998887
Q ss_pred hhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHH
Q 043156 102 VEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGG 181 (578)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~ 181 (578)
+..++.++. ...++.+.+++.+.+.+.+.+...++..++..|.+|+++ |++++++.+...++|.
T Consensus 82 ~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~lg~ 145 (395)
T PRK10054 82 AFASGFIAI----------PLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS------KTKIFSLNYTMLNIGW 145 (395)
T ss_pred HHHHHHHHH----------HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH------HHHHHHHHHHHHHHHH
Confidence 776554332 334566777778888888877778888899999998776 9999999999999999
Q ss_pred HHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhh
Q 043156 182 AISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEI 261 (578)
Q Consensus 182 ~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (578)
+++|.+++++.+ .+|+.+|++.+++.++..+...+..++.+++++++ +. + .
T Consensus 146 ~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~-~~----------------------~----~- 196 (395)
T PRK10054 146 TVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATE-TG----------------------S----V- 196 (395)
T ss_pred HHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccccccccc-hh----------------------h----h-
Confidence 999999999875 68999999888776666544433322211110000 00 0 0
Q ss_pred chhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhH-HHHHHHHHHHHHhhhccc
Q 043156 262 NMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGM-IPIFCCTIVMTLCLAQLQ 340 (578)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~ 340 (578)
+ +.. +..++ |+.... ...++....+........
T Consensus 197 --------------------~-~~~------------------------~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~ 230 (395)
T PRK10054 197 --------------------W-SPS------------------------VLLQD-KALLWFTCSGFLASFVSGAFASCIS 230 (395)
T ss_pred --------------------h-hhh------------------------hhccC-ceehHHHHHHHHHHHHHHHhhhhHH
Confidence 0 000 00001 111111 111111111111111111
Q ss_pred hhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHH
Q 043156 341 TFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAI 420 (578)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~ 420 (578)
.+.... . +.... ....+.+...+.+..+...+..+++.||..+| +.+..|+++..++++....
T Consensus 231 ~~~~~~-~--~~~~~---~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~l~~~~~~~~~~~~~~~~ 293 (395)
T PRK10054 231 QYVMVV-A--DSDFA---EKVVAVVLPVNAAMVVSLQYSVGRRLNAANIR-----------PLMTAGTLCFVIGLVGFIF 293 (395)
T ss_pred HHHHHh-c--ccchH---HHHHHHHHHhhhhheeeehhHHHHHHccCCch-----------hHHHHHHHHHHHHHHHHHH
Confidence 111111 1 11110 01112333344444444455556666554443 4566677777777665544
Q ss_pred HHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHH
Q 043156 421 FEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFS 500 (578)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg 500 (578)
.. .+.+.+.+..++.++|++...|...+++.+.+|++.||++.+..+ ...+|..+|
T Consensus 294 ~~-----------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~G 349 (395)
T PRK10054 294 SG-----------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAIN 349 (395)
T ss_pred cc-----------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHH
Confidence 21 133344556788999999989999999999999999999998766 566899999
Q ss_pred HHHHHhhhc
Q 043156 501 TILVNIVNS 509 (578)
Q Consensus 501 ~~~~~~~~~ 509 (578)
|.+.+.+.+
T Consensus 350 p~~~G~l~~ 358 (395)
T PRK10054 350 PLVSGVILT 358 (395)
T ss_pred HHHHHHHHH
Confidence 999998873
No 17
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.93 E-value=2.8e-24 Score=228.77 Aligned_cols=397 Identities=12% Similarity=0.017 Sum_probs=250.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCC
Q 043156 28 SLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPP 107 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~ 107 (578)
...++...++..++.......+|.+. ++++.+..+.|++.+.+.++..++.++.|+++||+ ||||++.++.++.+++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~ 96 (417)
T PRK10489 19 FRAVFIARFISIFGLGLLGVAVPVQI-QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGF 96 (417)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHH
Confidence 33445556666666665666666665 56788999999999999999999999999999998 99999988876665443
Q ss_pred cccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 043156 108 PCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTL 187 (578)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l 187 (578)
+... .......++...+++.|++.|++.+...++..+++.|.+|+++ |+++.++.+...++|..+||.+
T Consensus 97 ~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~g~~l 165 (417)
T PRK10489 97 IGLA-----LNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN------LMQAGAITMLTVRLGSVISPAL 165 (417)
T ss_pred HHHH-----HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH------HHHHHHHHHHHHhHHHHhHHHH
Confidence 2210 0000123566778889999999988888888999999999876 9999999999999999999999
Q ss_pred HHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhh
Q 043156 188 IVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEA 267 (578)
Q Consensus 188 ~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (578)
++++.+..+|++.|++.++..+++.+..+.. ++.+.+++++ +++. +
T Consensus 166 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~-----------------------~~~~---~------- 211 (417)
T PRK10489 166 GGLLIAAGGVAWNYGLAAAGTFITLLPLLRL-PALPPPPQPR-----------------------EHPL---R------- 211 (417)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC-CCCCCCCccc-----------------------ccch---H-------
Confidence 9999888899999988777666555443332 2111000000 0000 0
Q ss_pred hhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccchhhhhhh
Q 043156 268 AIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQTFSIQQG 347 (578)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (578)
+..+ .++ .....+.+.......+............ +.+..+.
T Consensus 212 -------------~~~~-------------------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~ 253 (417)
T PRK10489 212 -------------SLLA-------------------GFR-----FLLASPVVGGIALLGGLLTMASAVRVLY-PALADEV 253 (417)
T ss_pred -------------HHHH-------------------HHH-----HHHcChHHHHHHHHHHHHHHHHhHHHhh-HHHHHhc
Confidence 0000 000 0000111111111111111111111111 2222211
Q ss_pred ccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHh
Q 043156 348 LTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKD 427 (578)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~ 427 (578)
.+.+ ....+.+.....+..++...+.+++.|+..++ +.+..+.++.+++++......
T Consensus 254 ~g~~-------~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~-----------~~l~~~~~~~~~~~~~~~~~~----- 310 (417)
T PRK10489 254 WQMG-------AAQIGLLYAAVPLGAALGALTSGWLAHSARPG-----------LLMLLSTLGSFLAVGLFGLMP----- 310 (417)
T ss_pred cCCC-------hhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc-----------hHHHHHHHHHHHHHHHHHccc-----
Confidence 1111 11233444555666667777776665431111 345566666666665544322
Q ss_pred hhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043156 428 VARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIV 507 (578)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~ 507 (578)
+.+......++.+++.+...+...++..+.+|++.||++.|+++....+|..+|+.+.+.+
T Consensus 311 -------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l 371 (417)
T PRK10489 311 -------------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGL 371 (417)
T ss_pred -------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHH
Confidence 3444555667778888877788888999999999999999999999999999999999988
Q ss_pred hccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhccccccccccccCCccc
Q 043156 508 NSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYNYRPQTSVGGTAC 569 (578)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 569 (578)
.+.. ++...++..+++.++..++.+...++++++++|+.+.+..
T Consensus 372 ~~~~------------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (417)
T PRK10489 372 GAMM------------------TPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVDAS 415 (417)
T ss_pred HHHh------------------chhhHHHHHHHHHHHHHHHHHHhcccccccccccccCCCC
Confidence 7321 2234566677666666666666667777777666655443
No 18
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.93 E-value=3.1e-24 Score=229.63 Aligned_cols=167 Identities=11% Similarity=0.020 Sum_probs=137.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCC
Q 043156 28 SLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPP 107 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~ 107 (578)
.+..++..+...+..+.....++ .+.+++|+|..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~ 102 (434)
T PRK11663 25 LITMYLGYALFYFTRKSFNAAMP-EMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGIIN 102 (434)
T ss_pred HHHHHHHHHHHHHhhhhHHHhhH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHHH
Confidence 33444444444444444445555 44567999999999999999999999999999999998 99999999998888665
Q ss_pred cccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 043156 108 PCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTL 187 (578)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l 187 (578)
++. ....++..+++.|++.|++.|...+...+++.|++|+++ |++++++++.+.++|..++|.+
T Consensus 103 ~~~----------~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~~ 166 (434)
T PRK11663 103 ILF----------GFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE------RGGWWAIWNTAHNVGGALIPLV 166 (434)
T ss_pred HHH----------HHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 553 345678888899999999999888999999999999876 9999999999999999999999
Q ss_pred HHHhccccCchhHHHHHHHHHHHHH
Q 043156 188 IVWIQDNKGWDRGFGLSSVAVFLAT 212 (578)
Q Consensus 188 ~~~l~~~~g~~~~f~i~~~~~~~~~ 212 (578)
++++.+.+|||+.|++.++..++..
T Consensus 167 ~~~l~~~~gw~~~f~~~~i~~~~~~ 191 (434)
T PRK11663 167 VGAIALHYGWRYGMMIAGIIAIVVG 191 (434)
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHH
Confidence 9999988999999998877655443
No 19
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.93 E-value=2.7e-24 Score=232.91 Aligned_cols=428 Identities=10% Similarity=0.045 Sum_probs=246.4
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhh
Q 043156 24 GIKTSLLILAAFGFENLATIALGVNLVTYFNGVL--------HLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKA 95 (578)
Q Consensus 24 ~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~l--------g~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~ 95 (578)
+.+.++...+..+...+....+.+.. ..+++.+ |.+..+.+++.+.+.++..++.++.|+++||+ ||||+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~ 87 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTV-ESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDS 87 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhH-HHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHH
Confidence 44555555555555544433333333 3345554 88999999999999999999999999999998 99999
Q ss_pred hhhhhhhhccCCcccccCCCCCcc---ccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHH
Q 043156 96 VLISGSVEFLPPPCNVFDPTAGCK---KIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNL 172 (578)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~ 172 (578)
++++.+++.++.+...+. ..... .........++++|+++|++.|...|...++++|++|+++ |++++++
T Consensus 88 ~~~~~~l~~i~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~------rg~~~~~ 160 (479)
T PRK10077 88 LKIAAVLFFISALGSAWP-EFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI------RGKLVSF 160 (479)
T ss_pred HHHHHHHHHHHHHHHHhh-ccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh------hhHHHHH
Confidence 999988877554432100 00000 0111335677899999999999999999999999999887 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHhc--------cccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHH
Q 043156 173 LFLAVCIGGAISVTLIVWIQ--------DNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAI 244 (578)
Q Consensus 173 ~~~~~~lG~~~~p~l~~~l~--------~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (578)
...+..+|..+++.+++.+. +.+|||++|++.++..++..+..++. ++.++....+ .+.++..+.....
T Consensus 161 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l-~~s~~~l~~~-~~~~~~~~~~~~~- 237 (479)
T PRK10077 161 NQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFV-PETPRYLMSR-GKQEQAEGILRKI- 237 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcC-CCCcHHHHHc-CCHHHHHHHHHHH-
Confidence 99999999999987776543 35689999998877666655443332 2211100000 0000000000000
Q ss_pred HhcccCCCCCchhhhhhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHH-
Q 043156 245 RNRKLELPEDPMELYEINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMI- 323 (578)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~- 323 (578)
..++ ...+..+..+... . +..+..+..+...
T Consensus 238 -----~~~~------------------------~~~~~~~~~~~~~------------------~-~~~~~~~~~~~~~~ 269 (479)
T PRK10077 238 -----MGNT------------------------LATQALQEIKHSL------------------D-HGRKTGGKLLMFGV 269 (479)
T ss_pred -----cCCh------------------------hHHHHHHHHHHHH------------------H-HhhhhhhhhcchhH
Confidence 0000 0000000000000 0 0000000111100
Q ss_pred -HHH-HHHHHHHHhhhccc------hhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCC
Q 043156 324 -PIF-CCTIVMTLCLAQLQ------TFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNP 395 (578)
Q Consensus 324 -~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~ 395 (578)
.+. ......+..+.... +.+... .+.+. ...........+..++..++.+++.||+++|
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~-------~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r----- 336 (479)
T PRK10077 270 GVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGAST-------DIALLQTIIVGVINLTFTVLAIMTVDKFGRK----- 336 (479)
T ss_pred HHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCC-------chHHHHHHHHHHHHHHHHHHHHHHHHHhcCh-----
Confidence 000 00111111000000 111111 11111 0112233334566677788888888888777
Q ss_pred CCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHH-Hhhhhhheee
Q 043156 396 TGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMF-TYVGLLEFFY 474 (578)
Q Consensus 396 ~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~-~~~~~~~~~~ 474 (578)
+.+..|.+++.++++++..... .+....+.....++.+++... +.|..+.++.
T Consensus 337 ------~~~i~~~~~~~v~~~~l~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (479)
T PRK10077 337 ------PLQIIGALGMAIGMFSLGTAFY--------------------TQAPGIVALLSMLFYVAAFAMSWGPVCWVLLS 390 (479)
T ss_pred ------HHHHHhHHHHHHHHHHHHHHHh--------------------cCcccHHHHHHHHHHHHHHhccccchhHHHhH
Confidence 4667788888888777654320 011122333333444444443 3477789999
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhcc
Q 043156 475 SEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSS 554 (578)
Q Consensus 475 ~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 554 (578)
|.+|+++||+++|+.+...++++.+++.+.+.+.. .+|+. + ..++...|++.++++++++++.+++.+
T Consensus 391 e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~--------~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (479)
T PRK10077 391 EIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDK--------NSWLV-A---HFHNGFSYWIYGCMGVLAALFMWKFVP 458 (479)
T ss_pred hhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHh--------ccchh-h---hccCccHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999888776541 12221 1 122335678888888888877777767
Q ss_pred cccccccc
Q 043156 555 RYNYRPQT 562 (578)
Q Consensus 555 ~~~~~~~~ 562 (578)
+.++++.|
T Consensus 459 e~~~~~~~ 466 (479)
T PRK10077 459 ETKGKTLE 466 (479)
T ss_pred cCCCCCHH
Confidence 66655444
No 20
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.93 E-value=7e-24 Score=231.08 Aligned_cols=181 Identities=13% Similarity=0.084 Sum_probs=133.3
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhh
Q 043156 23 GGIKTSLLILAAFGFENLATIALGVNLVTYFNGV-----LHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVL 97 (578)
Q Consensus 23 ~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~-----lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~ 97 (578)
.+.+.+.+..+..+...+....+....+. +..+ .+.+..+.+++.+.+.++..++.++.|+++||+ |||+++.
T Consensus 13 ~~~~~~~~~~~~~~~~g~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~ 90 (502)
T TIGR00887 13 QHFRAIVIAGVGFFTDSYDLFCISLVTKM-LGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYG 90 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHH
Confidence 34445555555555555554444444443 3332 245566789999999999999999999999998 9999999
Q ss_pred hhhhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHH
Q 043156 98 ISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAV 177 (578)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~ 177 (578)
++++++.++.++..+++. .....+...++++|+++|++.|...+..+.+++|.+|+++ |+++.++.+...
T Consensus 91 ~~~~~~~v~~~~~~~~~~----~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~------Rg~~~~~~~~~~ 160 (502)
T TIGR00887 91 MELIIMIIATVASGLSPG----SSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW------RGAMMAAVFAMQ 160 (502)
T ss_pred HHHHHHHHHHHHHHHccC----cccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh------HHHHHHHHHHHH
Confidence 998888866554310000 0000125789999999999999999999999999999997 999999999999
Q ss_pred HHHHHHHHHHHHHhcc-----------------------ccCchhHHHHHHHHHHHHHHHH
Q 043156 178 CIGGAISVTLIVWIQD-----------------------NKGWDRGFGLSSVAVFLATIIF 215 (578)
Q Consensus 178 ~lG~~~~p~l~~~l~~-----------------------~~g~~~~f~i~~~~~~~~~~~~ 215 (578)
.+|..+++.++.++.. .++||++|.+.++..++..+..
T Consensus 161 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~ 221 (502)
T TIGR00887 161 GFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFR 221 (502)
T ss_pred HHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHH
Confidence 9999999988765531 2479999988777665554443
No 21
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.93 E-value=1.4e-23 Score=223.01 Aligned_cols=179 Identities=16% Similarity=0.110 Sum_probs=148.5
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhh
Q 043156 23 GGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSV 102 (578)
Q Consensus 23 ~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~ 102 (578)
.+++.++.+.+..+++......+. +....+++++|++.++.+++.+.+.++..++.++.|+++||+ ||||++..++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~ 82 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIG-FAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVL 82 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHH-HHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHH
Confidence 356666666666666666655544 444589999999999999999999999999999999999998 999999999988
Q ss_pred hccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHH
Q 043156 103 EFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGA 182 (578)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~ 182 (578)
+.++.++. ...++...+++.|++.|++.+...|....++.|++|+++ |++.+++++.+.++|..
T Consensus 83 ~~~~~~~~----------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------rg~~~~~~~~~~~~g~~ 146 (412)
T TIGR02332 83 WGIASTAT----------MFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF------RARANALFMIAMPVTMA 146 (412)
T ss_pred HHHHHHHH----------HHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHH
Confidence 88766554 445778889999999999999999998899999999876 99999999999999999
Q ss_pred HHHHHHHHhcc------ccCchhHHHHHHHHHHHHHHHHHhcC
Q 043156 183 ISVTLIVWIQD------NKGWDRGFGLSSVAVFLATIIFAAGL 219 (578)
Q Consensus 183 ~~p~l~~~l~~------~~g~~~~f~i~~~~~~~~~~~~~~~~ 219 (578)
++|.+++++.+ ..|||+.|++.++..++..++.++..
T Consensus 147 ~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~ 189 (412)
T TIGR02332 147 LGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWL 189 (412)
T ss_pred HHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhcc
Confidence 99999998863 36899999998777655544444433
No 22
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.93 E-value=1.3e-24 Score=234.73 Aligned_cols=183 Identities=10% Similarity=-0.074 Sum_probs=137.8
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHH---HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhh
Q 043156 23 GGIKTSLLILAAFGFENLATIALG---VNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLIS 99 (578)
Q Consensus 23 ~~~r~~~~l~~~~~~~~~~~~~~~---~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~ 99 (578)
.+.|..+.+....++.....|... ......+.+++|+|.++.|++.+.+.+++.++.+++|+++||+ ||||++.++
T Consensus 22 ~~~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~ 100 (467)
T PRK09556 22 MWFKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFL 100 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHH
Confidence 333434444444444444444332 2334567899999999999999999999999999999999998 999999888
Q ss_pred hhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHH
Q 043156 100 GSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCI 179 (578)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~l 179 (578)
.+++++..++.. ......+.+...+++.|+++|++.+...|+..++++|++|+++ |+++++++..+.++
T Consensus 101 ~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~a~gi~~~~~~l 169 (467)
T PRK09556 101 LILSAICMLGFG-----ASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGRFLGFWNISHNL 169 (467)
T ss_pred HHHHHHHHHHHH-----HHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eeeeEEeeecccch
Confidence 777664433220 0001234678899999999999999999999999999999987 99999999999999
Q ss_pred HHHHHHHHHHHhcccc---CchhHHHHHHHHHHHHHHHHHh
Q 043156 180 GGAISVTLIVWIQDNK---GWDRGFGLSSVAVFLATIIFAA 217 (578)
Q Consensus 180 G~~~~p~l~~~l~~~~---g~~~~f~i~~~~~~~~~~~~~~ 217 (578)
|.++++.+..++.+.. +|+..|.+.+++.++..+..++
T Consensus 170 G~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~ 210 (467)
T PRK09556 170 GGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLR 210 (467)
T ss_pred hhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHH
Confidence 9999999887776542 5999888877765544444333
No 23
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.93 E-value=6.4e-24 Score=224.91 Aligned_cols=382 Identities=12% Similarity=0.054 Sum_probs=251.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-----HHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhh
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAE-----AANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISG 100 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~-----~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~ 100 (578)
|....+.+..++...++....++++.|.+ ++|.+..+ .+++.+.+.+...++.++.|+++||+ |||+++.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~ 91 (408)
T PRK09874 14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSA 91 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHH
Confidence 44666667788888888888888888874 68888654 48889999999999999999999998 9999999988
Q ss_pred hhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHH
Q 043156 101 SVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIG 180 (578)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG 180 (578)
+...++.++. ....+.+.+++.|++.|++.+ ..+....++.|.+|+++ |+++.++++...++|
T Consensus 92 ~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g 154 (408)
T PRK09874 92 LGMGIVMVLM----------GLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNK------SGWALGTLSTGGVSG 154 (408)
T ss_pred HHHHHHHHHH----------HHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhh------hhHHHHHHHHHHHHH
Confidence 8777554442 334678888999999999865 45777788899998776 999999999999999
Q ss_pred HHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhh
Q 043156 181 GAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYE 260 (578)
Q Consensus 181 ~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (578)
..++|.+++.+.+.++|++.|++.+++.++..+..+...++.++.++++ +.. +
T Consensus 155 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------------------------~ 207 (408)
T PRK09874 155 ALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKK-EML--------------------------H 207 (408)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccch-hhh--------------------------H
Confidence 9999999999988889999999988776655554443332211100000 000 0
Q ss_pred hchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHH-HHHHHHHHHHhhhcc
Q 043156 261 INMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIP-IFCCTIVMTLCLAQL 339 (578)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~ 339 (578)
..+.. . ..++++....... ...............
T Consensus 208 ---------------------~~~~~----------------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (408)
T PRK09874 208 ---------------------MREVV----------------T--------SLKNPKLVLSLFVTTLIIQVATGSIAPIL 242 (408)
T ss_pred ---------------------HHHHH----------------H--------hCcCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0 0000111111111 011111111111111
Q ss_pred chhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHH
Q 043156 340 QTFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAA 419 (578)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~ 419 (578)
+.+..+.. ...... ....+.+.....+..++..++.+++.||+.+| +.+.++.++..++++...
T Consensus 243 ~~~~~~~~-~~~~~~----~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~-----------~~~~~~~~~~~~~~~~~~ 306 (408)
T PRK09874 243 TLYVRELA-GNVSNI----AFISGMIASVPGVAALLSAPRLGKLGDRIGPE-----------KILITALIFSVLLLIPMS 306 (408)
T ss_pred HHHHHHHh-ccchHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-----------hhHHHHHHHHHHHHHHHH
Confidence 11111111 100000 00012233344566677788888888887766 345556655555554443
Q ss_pred HHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHH
Q 043156 420 IFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFF 499 (578)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~l 499 (578)
... +.+.+.+..++.+++.+...|...++..+..|++.+|+..++++....+|..+
T Consensus 307 ~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~ 362 (408)
T PRK09874 307 FVQ------------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVT 362 (408)
T ss_pred Hhc------------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHh
Confidence 322 34445556677899999889998888889999999999999999999999999
Q ss_pred HHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccc
Q 043156 500 STILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRY 556 (578)
Q Consensus 500 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~ 556 (578)
|+.+.+.+.+ ..+|+..|++.+++.+++.+..+...+|.
T Consensus 363 gp~~~G~l~~------------------~~g~~~~f~~~~~~~l~~~~~~~~~~~~~ 401 (408)
T PRK09874 363 GPLMGAAISA------------------NYGFRAVFLVTAGVVLFNAVYSWNSLRRR 401 (408)
T ss_pred hHHHHHHHHh------------------hcchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999987762 12466789999988888887776654443
No 24
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.92 E-value=2.2e-23 Score=220.12 Aligned_cols=180 Identities=14% Similarity=0.092 Sum_probs=153.6
Q ss_pred cccccccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhh
Q 043156 16 PAVKYKHGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKA 95 (578)
Q Consensus 16 ~~~~~~~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~ 95 (578)
..+...|.+|+....+.+..+.....-|...+.++. +.+++|++.++.++..+.+.++..++.++.|+++||+ ||||+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~ 87 (394)
T PRK10213 10 GADAITRPNWSAVFSVAFCVACLIIVEFLPVSLLTP-MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYV 87 (394)
T ss_pred CCccchhhHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHH
Confidence 344556778888777777777776676666666665 5679999999999999999999999999999999998 99999
Q ss_pred hhhhhhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHH
Q 043156 96 VLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFL 175 (578)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~ 175 (578)
+.++.++..++.++. ...++.+.+++.|+++|++.+...|...+++.|++|+++ |+++.++...
T Consensus 88 ~~~~~~~~~~~~~~~----------~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~------~~~a~~~~~~ 151 (394)
T PRK10213 88 VILFAVLLTLSCLLV----------SFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT------VPKALSVIFG 151 (394)
T ss_pred HHHHHHHHHHHHHHH----------HHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH------HHHHHHHHHH
Confidence 999999988665443 345788999999999999999999999999999999876 9999999999
Q ss_pred HHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHH
Q 043156 176 AVCIGGAISVTLIVWIQDNKGWDRGFGLSSVAVFLATI 213 (578)
Q Consensus 176 ~~~lG~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~ 213 (578)
+.++|..++|.+++++.+.+|||+.|++.+++.++..+
T Consensus 152 ~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l 189 (394)
T PRK10213 152 AVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIF 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999989999999988766554443
No 25
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.92 E-value=3.3e-23 Score=221.60 Aligned_cols=174 Identities=17% Similarity=0.161 Sum_probs=126.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCHHHHHHHHHHH---HHHHHHHHhHHHHHhhhccchhhhhhhhhh
Q 043156 28 SLLILAAFGFENLATIALGVNLVTYFNGVLH---LDLAEAANQVTNY---MGTSYILSIVVALLADAFIGRFKAVLISGS 101 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg---~s~~~~~~~~~~~---~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 101 (578)
+....+..+++.+.+.. .+++..++.++++ .+..+.+.+.+.+ .++..++.+++|+++||+ ||||++.++.+
T Consensus 24 ~~~~~~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~~ 101 (432)
T PRK10406 24 IVGASSGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISVC 101 (432)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHH
Confidence 33344456677777665 5667778888884 5565554544444 444458999999999998 99999999999
Q ss_pred hhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHH
Q 043156 102 VEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGG 181 (578)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~ 181 (578)
+++++.++..+.+.. ......++..+++.|+++|++.|...|...++++|++|+++ |++..++.+.+.+.|.
T Consensus 102 ~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~------rg~~~~~~~~~~~~G~ 173 (432)
T PRK10406 102 MMCFGSLVIACLPGY--ETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR------KGFYASFQYVTLIGGQ 173 (432)
T ss_pred HHHHHHHHHhhcCCc--hhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc------ccHHHHHHHHHHHHHH
Confidence 998666553110000 00001234568899999999999999999999999999987 9999999988999998
Q ss_pred HHHHHHHHHhc--------cccCchhHHHHHHHHHHHH
Q 043156 182 AISVTLIVWIQ--------DNKGWDRGFGLSSVAVFLA 211 (578)
Q Consensus 182 ~~~p~l~~~l~--------~~~g~~~~f~i~~~~~~~~ 211 (578)
.+++.+...+. ..+|||++|++.++..++.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 174 LLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 88887765543 2579999999877665443
No 26
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.92 E-value=8.3e-24 Score=227.65 Aligned_cols=411 Identities=13% Similarity=0.082 Sum_probs=234.6
Q ss_pred HHHHhcCCC--------HHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCcccccc
Q 043156 52 YFNGVLHLD--------LAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEG 123 (578)
Q Consensus 52 yl~~~lg~s--------~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (578)
.+..+++.+ ..+.+++.+.+.++..++.++.|+++||+ ||||+++++.+++.++.++.. .....
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~-------~~~~~ 124 (481)
T TIGR00879 53 LPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMG-------LAAFA 124 (481)
T ss_pred cHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHH-------Hhccc
Confidence 344555555 89999999999999999999999999998 999999999988886654431 11223
Q ss_pred chhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHH---HHhccccCchhH
Q 043156 124 SDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLI---VWIQDNKGWDRG 200 (578)
Q Consensus 124 ~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~---~~l~~~~g~~~~ 200 (578)
.+.+.+++.|+++|+|.+...+...++++|++|+++ |++++++++.+.++|..++|.++ +.+.+..+||+.
T Consensus 125 ~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~ 198 (481)
T TIGR00879 125 LSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIP 198 (481)
T ss_pred cchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHH
Confidence 345678999999999999999999999999999887 99999999999999999999998 766677899999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhcccCCCCCcc
Q 043156 201 FGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIETEFLPHRDIF 280 (578)
Q Consensus 201 f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (578)
|++.++..++..+..++..+..+...+++ . ..+..+..... + ..++......+. .
T Consensus 199 f~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~-~~~~~~~~~~~---~--~~~~~~~~~~~~------------------~ 253 (481)
T TIGR00879 199 LGLQLIPAGLLFLGLFFLPESPRWLVGKG-R-VEEARKSLARL---R--GTSGEDKELLDE------------------L 253 (481)
T ss_pred HHHHHHHHHHHHHHHhcCCCChHHHHHcC-C-hHHHHHHHHHH---h--CCCCCcHHHHHH------------------H
Confidence 99966655555444333322110000000 0 00000000000 0 000000000000 0
Q ss_pred chhhHhhhhccCccccccccCCCCCccccchhhhhHHHHH-h-HHHHHHHHHHHHHhhhccchhhhhhhccCCCCCCCce
Q 043156 281 RFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIIL-G-MIPIFCCTIVMTLCLAQLQTFSIQQGLTMDTSVTTSF 358 (578)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (578)
+..+....... +.....|+.. ....++.. + .+...+..............+....... ....
T Consensus 254 ~~~~~~~~~~~-------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~--- 317 (481)
T TIGR00879 254 ELIDIKRSIEK-------RSVQPSWGSL----FSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN--AGVS--- 317 (481)
T ss_pred HHHHHHHHHHH-------hhccccHHHH----HhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH--cCCC---
Confidence 00000000000 0000001100 00001100 0 0001111111111111111111111111 1110
Q ss_pred eeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCC
Q 043156 359 HIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAI 438 (578)
Q Consensus 359 ~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (578)
....+.......+..++..++.+++.||+.+| +.+.++++++.+++++++...... . +.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~-~----~~----- 376 (481)
T TIGR00879 318 TDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRR-----------PLLLIGAAGMAICLFVLGILGASF-V----TG----- 376 (481)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----------HHHHHHHHHHHHHHHHHHHHhhcc-c----CC-----
Confidence 11122344445566777888888888887776 355667777777776665432100 0 00
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCC
Q 043156 439 PVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSG 518 (578)
Q Consensus 439 ~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~ 518 (578)
.....+..++....++.+.......+....+..+..|++.||+++|+.++..++|+.+++.+.+.+.+.
T Consensus 377 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~-------- 445 (481)
T TIGR00879 377 ---SSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES-------- 445 (481)
T ss_pred ---cccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------
Confidence 000112223332333333333344577777888999999999999999999999999999998876521
Q ss_pred CCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhccccccc
Q 043156 519 GWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYNYR 559 (578)
Q Consensus 519 ~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~ 559 (578)
.++...|++.++++++++++.+++.++.+++
T Consensus 446 ----------~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 476 (481)
T TIGR00879 446 ----------IGVGGVFIFFGGLNVLGLIFVYFFLPETKGR 476 (481)
T ss_pred ----------cCccceehhHHHHHHHHHHHHheecccCCCC
Confidence 1234568888888888888887776655543
No 27
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.92 E-value=4.8e-23 Score=210.32 Aligned_cols=381 Identities=14% Similarity=0.098 Sum_probs=276.3
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhh
Q 043156 22 HGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGS 101 (578)
Q Consensus 22 ~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 101 (578)
+..+..++.+.+..|....+=|.....+| -+.+++|.|..++|++++.|..+..++.|+-..+.||+ .||++++..+.
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp-~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l~ 86 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLP-PIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLLA 86 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHHH
Confidence 55678888899999988888887777665 66789999999999999999999999999999999998 99999999999
Q ss_pred hhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHH
Q 043156 102 VEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGG 181 (578)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~ 181 (578)
++.++-++. +.++++..++++|++.++..|.+++...++.++..|+++ |++++++...+..++.
T Consensus 87 lFi~~n~l~----------alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~------~~~Aiaiv~~G~tlA~ 150 (394)
T COG2814 87 LFIVSNLLS----------ALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK------RGRALALVFTGLTLAT 150 (394)
T ss_pred HHHHHHHHH----------HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------hhhHHHHHHHHHHHHH
Confidence 999876664 667999999999999999999999999999999999997 9999999999999999
Q ss_pred HHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCC-cchHHHHHHHHHHHHHhcccCCCCCchhhhh
Q 043156 182 AISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQG-SSVLIEIIQVYVAAIRNRKLELPEDPMELYE 260 (578)
Q Consensus 182 ~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (578)
.+|..++.++.+.+|||+.|++.+.+.+++.+..+...| +++.++. ..++.+. ..
T Consensus 151 v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~~~~~~~~~----------------------~~ 206 (394)
T COG2814 151 VLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEISGSLPGPLRTL----------------------LR 206 (394)
T ss_pred HHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCCcchhHH----------------------HH
Confidence 999999999999999999999998888887777766655 1111111 0000000 00
Q ss_pred hchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccc
Q 043156 261 INMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQ 340 (578)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 340 (578)
..++.+-........+.....+..|.+..
T Consensus 207 ---------------------------------------------------~l~~p~v~~~l~~t~l~~~g~F~~ftYi~ 235 (394)
T COG2814 207 ---------------------------------------------------LLRRPGVLLGLLATFLFMTGHFALYTYIR 235 (394)
T ss_pred ---------------------------------------------------HhcCchHHHHHHHHHHHHcchhhhHHhHH
Confidence 00011111122223344444444544444
Q ss_pred hhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHH
Q 043156 341 TFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAI 420 (578)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~ 420 (578)
+++.+.. +++. ...++......+..+++..+.+++.|| ..| +.+.....++.+.++.+.+
T Consensus 236 P~L~~v~-g~s~-------~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~-----------~~l~~~~~l~a~~~l~l~~ 295 (394)
T COG2814 236 PFLESVA-GFSV-------SAVSLVLLAFGIAGFIGNLLGGRLADR-GPR-----------RALIAALLLLALALLALTF 295 (394)
T ss_pred HHHHHcc-CCCH-------hHHHHHHHHHHHHHHHHHHHHhhhccc-cch-----------hHHHHHHHHHHHHHHHHHH
Confidence 4443322 1111 123345566778888888999999887 333 2445555677667666555
Q ss_pred HHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHH
Q 043156 421 FEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFS 500 (578)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg 500 (578)
.. .+.+......++.+++........+.-..+.+ ++.++.+++++....++|..+|
T Consensus 296 ~~-----------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p~~~~~a~sl~~aa~nlgia~G 351 (394)
T COG2814 296 TG-----------------------ASPALALALLFLWGFAFSPALQGLQTRLARLA-PDAADLAGSLNVAAFNLGIALG 351 (394)
T ss_pred hc-----------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-CCchHHHHHHHHHHHHHHHHHH
Confidence 43 13334444444456655444444444444433 5779999999999999999999
Q ss_pred HHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhccccc
Q 043156 501 TILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYN 557 (578)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~ 557 (578)
..+.+.+.+ ..++....+..+++.+++.++.+...++.+
T Consensus 352 A~lGG~v~~------------------~~g~~~~~~~~a~l~~~a~~~~~~~~~~~~ 390 (394)
T COG2814 352 AALGGLVLD------------------ALGYAATGWVGAALLLLALLLALLSARKDR 390 (394)
T ss_pred HHHHHHHHH------------------hhchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999998873 145667888999999988888877665544
No 28
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.92 E-value=2e-23 Score=218.66 Aligned_cols=384 Identities=11% Similarity=0.027 Sum_probs=234.2
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchh
Q 043156 47 VNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDA 126 (578)
Q Consensus 47 ~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (578)
....+++.+++|.|..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++..+. ....+.
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~----------~~~~~~ 82 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQ----------AFAGAY 82 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHH----------HHHcCH
Confidence 3444568899999999999999999999999999999999998 99999999988877655443 334588
Q ss_pred HHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHHHHHH
Q 043156 127 ALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGLSSV 206 (578)
Q Consensus 127 ~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i~~~ 206 (578)
+.+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+...++|..++|.+++++.+..+|++.|++.++
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 156 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASE------RATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGV 156 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------HHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHH
Confidence 889999999999999999999999999999876 99999999999999999999999999888999999998887
Q ss_pred HHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhcccCCCCCccchhhHh
Q 043156 207 AVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIETEFLPHRDIFRFLDKA 286 (578)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (578)
..++..+..++..++.+.+++.. .+..+ ... .+ ... . +.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----------------------~~~---~~---~~~----~-~~------- 195 (399)
T TIGR00893 157 LGIIWGVLWLKFIPDPPQKAKWL-TEEEK----------------------YIV---VG---GLL----A-EQ------- 195 (399)
T ss_pred HHHHHHHHhhheecCCCCccccC-CHHHH----------------------hhc---ch---hhc----c-cc-------
Confidence 76655554443333221111100 00000 000 00 000 0 00
Q ss_pred hhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccchhhhhhhccCCCCCCCceeeCCCccc
Q 043156 287 AIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQTFSIQQGLTMDTSVTTSFHIPPASLP 366 (578)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (578)
+.+.. ....++.. .+..++ ++..............+.......+.+..+..+.+ ....+.+.
T Consensus 196 ~~~~~---------~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 257 (399)
T TIGR00893 196 QGKGP---------STPKKYQI-KELLKD-RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLS-------ILEAGFMA 257 (399)
T ss_pred ccccc---------cCCCccch-HHHhcC-HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccc-------HHHhhHHH
Confidence 00000 00000000 000111 12211111111111111111111122222211111 11234455
Q ss_pred CchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccc
Q 043156 367 ILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPI 446 (578)
Q Consensus 367 ~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (578)
....+..++..++.+++.||+.+|.. .+........++.+......... ....
T Consensus 258 ~~~~~~~~~~~~~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~ 310 (399)
T TIGR00893 258 SLPGIVGFIGMILGGRLSDLLLRRGK----------SLVFARKTAIIAGLVLSLLMFAT-----------------NYVN 310 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccc----------chhHHHHHHHHHHHHHHHHHHHh-----------------ccch
Confidence 55667778888889999988887720 11111111111111111100000 0011
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCC
Q 043156 447 STFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNI 526 (578)
Q Consensus 447 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (578)
+.+..+....+..++.+ ..+..+++..+.+|++.||+++|+.+....+|+.+++.+.+.+.+..
T Consensus 311 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~--------------- 374 (399)
T TIGR00893 311 IPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT--------------- 374 (399)
T ss_pred hHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC---------------
Confidence 22223322333333333 68889999999999999999999999999999999999998776211
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHhh
Q 043156 527 NRNHLNLFFWLLSALSFINFSVYLF 551 (578)
Q Consensus 527 ~~~~~~~~f~~~~~~~~i~~i~~~~ 551 (578)
++++..|++.+++.+++.+.+++
T Consensus 375 --g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 375 --GSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred --CchhHHHHHHHHHHHHHHHHHHH
Confidence 22567788888888887776654
No 29
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.92 E-value=3.8e-23 Score=218.25 Aligned_cols=360 Identities=13% Similarity=0.039 Sum_probs=241.6
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccc
Q 043156 43 IALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIE 122 (578)
Q Consensus 43 ~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (578)
+.+.+.+| .+++++|+|.++.+++.+.+.++..++.++.|+++||+ ||||++..+.++++++.++. +.
T Consensus 26 ~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~----------~~ 93 (393)
T PRK09705 26 TSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMR----------EL 93 (393)
T ss_pred hccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHH----------HH
Confidence 44444454 67789999999999999999999999999999999998 99999999999999887664 55
Q ss_pred cchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcccc-CchhHH
Q 043156 123 GSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNK-GWDRGF 201 (578)
Q Consensus 123 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~-g~~~~f 201 (578)
.+++..++++|+++|+|.+...+....++.|++| ++ |+++++++..+.++|..+++.+++++.++. +||+.+
T Consensus 94 a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~ 166 (393)
T PRK09705 94 YPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR------TPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTL 166 (393)
T ss_pred CcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc------chhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 6788889999999999999999999999999997 54 899999999999999999999999988775 799988
Q ss_pred HHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhcccCCCCCccc
Q 043156 202 GLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIETEFLPHRDIFR 281 (578)
Q Consensus 202 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (578)
.+.++..++..+..+...++ +|++ ++ ++..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~----~~~~-~~-------------------~~~~-------------------------- 196 (393)
T PRK09705 167 AWWALPAVVALFAWWWQSAR----EVAS-SH-------------------KTTT-------------------------- 196 (393)
T ss_pred HHHHHHHHHHHHHHHHHhcC----CCcc-cc-------------------CCCc--------------------------
Confidence 76655544333332222111 1111 00 0000
Q ss_pred hhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccchhhhhhhccCCCCCCCceeeC
Q 043156 282 FLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQTFSIQQGLTMDTSVTTSFHIP 361 (578)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (578)
.+.+ ...+++.....+...+....++......+.++.++ +.+. ..
T Consensus 197 ---------------------~~~~-----~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~--g~s~-------~~ 241 (393)
T PRK09705 197 ---------------------TPVR-----VVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEI--GASA-------QY 241 (393)
T ss_pred ---------------------CCcc-----cccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCh-------hh
Confidence 0000 00111111111112222223333333333333221 2111 12
Q ss_pred CCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCC
Q 043156 362 PASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVV 441 (578)
Q Consensus 362 ~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (578)
.+.......+..++..++.+++.||..+| +.+.+++.+..++.+.+....
T Consensus 242 ag~~~~~~~i~~i~g~~~~g~l~~r~~~~-----------~~~~~~~~l~~~~~~~~~~~~------------------- 291 (393)
T PRK09705 242 SGSLLALMTLGQAAGALLMPAMARHQDRR-----------KLLMLALVLQLVGFCGFIWLP------------------- 291 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccch-----------HHHHHHHHHHHHHHHHHHHcc-------------------
Confidence 33455566777888888888887776655 345666666666665443322
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccC-CchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCC
Q 043156 442 QPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEA-PKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGW 520 (578)
Q Consensus 442 ~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~-P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~ 520 (578)
+ +...+ ..++.+++.+...|.......+.. |++.+|+..|+.+....++..+++.+.+.+.+.+
T Consensus 292 ---~-~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~--------- 356 (393)
T PRK09705 292 ---L-QLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSIS--------- 356 (393)
T ss_pred ---c-hHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------
Confidence 1 11111 123456666666777766666776 4688999999999999999999999999887422
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhccccccc
Q 043156 521 LAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYNYR 559 (578)
Q Consensus 521 ~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~ 559 (578)
++|+..|.+.++++++..++.+.+.++++.+
T Consensus 357 --------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (393)
T PRK09705 357 --------GNYLMDWAFHALCVVGLMIITLRFAPARFPQ 387 (393)
T ss_pred --------CCchHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 2355678888888888888877777665443
No 30
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.92 E-value=2.2e-23 Score=217.49 Aligned_cols=353 Identities=13% Similarity=0.025 Sum_probs=218.3
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccch
Q 043156 46 GVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSD 125 (578)
Q Consensus 46 ~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (578)
.......+++++|+|.++.|++.+.+.+++.++.++.|+++||+ |||+++..+......+.... ....+
T Consensus 10 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~----------~~~~~ 78 (368)
T TIGR00903 10 FSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAGRL----------LDPFN 78 (368)
T ss_pred HHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHHHH----------HHhcc
Confidence 34444566889999999999999999999999999999999998 99998765554444322111 22257
Q ss_pred hHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHHHHH
Q 043156 126 AALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGLSS 205 (578)
Q Consensus 126 ~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i~~ 205 (578)
+..+++.|+++|+|.+.. ++....++|++|+++ |++++++.+.+.++|..+++.+++++.+++|||+.|++.+
T Consensus 79 ~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~------r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~ 151 (368)
T TIGR00903 79 YEWLLACQLLAALGQPFL-LNAFAPAASQIREER------RDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIA 151 (368)
T ss_pred HHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 889999999999999864 445555699999876 9999999999999999999999999999899999999977
Q ss_pred HHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhcccCCCCCccchhhH
Q 043156 206 VAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIETEFLPHRDIFRFLDK 285 (578)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (578)
++.++..+.+++..++.++++++. .+ .. + ..
T Consensus 152 ~l~~~~~~~~~~~lp~~p~~~~~~----------------------~~-~~---~---------------------~~-- 182 (368)
T TIGR00903 152 AVAAAGIILVLAALPALPFQAAEG----------------------FG-FK---D---------------------AV-- 182 (368)
T ss_pred HHHHHHHHHHHHHcCCCCCCCCCC----------------------cc-hH---H---------------------HH--
Confidence 776555444444333211110000 00 00 0 00
Q ss_pred hhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccchhhhhhhccCCCCCCCceeeCCCcc
Q 043156 286 AAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQTFSIQQGLTMDTSVTTSFHIPPASL 365 (578)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (578)
. +++ +-.++++.....+..++....++....+.++++.+. ..+.. .+..
T Consensus 183 ~-----------------~~~----~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~--g~s~~--------~~~~ 231 (368)
T TIGR00903 183 K-----------------EFG----ALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPA--GLEDI--------AGDA 231 (368)
T ss_pred H-----------------HHH----HHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCChH--------HHHH
Confidence 0 000 001112222222233444445555555555555321 11211 1111
Q ss_pred cCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCcc
Q 043156 366 PILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLP 445 (578)
Q Consensus 366 ~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (578)
.. +..+........+.|+..||.. +...+....++.++++...+...
T Consensus 232 ~~---l~~~~g~~g~~~~~d~~~r~~~-------r~~~~~~~~~~~a~~~~~~~~~~----------------------- 278 (368)
T TIGR00903 232 VA---LAILAGLIGVAVIPDRVARAGL-------RSIYIRAAALLIAAFFLALAFEL----------------------- 278 (368)
T ss_pred HH---HHHHHHHHHHHHhhHHhhhhhh-------HHHHHHHHHHHHHHHHHHHHHcc-----------------------
Confidence 12 2222222334556666554410 01112223333333333332211
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCC
Q 043156 446 ISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNN 525 (578)
Q Consensus 446 ~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (578)
+....+....+.+++.....+..+++..|.+|++.||+++|+.+...++++.+++.+.+.+..
T Consensus 279 -~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~---------------- 341 (368)
T TIGR00903 279 -NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS---------------- 341 (368)
T ss_pred -ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc----------------
Confidence 122223333444555555667788899999999999999999999999999999988876541
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHh
Q 043156 526 INRNHLNLFFWLLSALSFINFSVYL 550 (578)
Q Consensus 526 ~~~~~~~~~f~~~~~~~~i~~i~~~ 550 (578)
+.+..|.+.++..+++.+..+
T Consensus 342 ----~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 342 ----SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHH
Confidence 234568888888888777764
No 31
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.92 E-value=5.3e-23 Score=218.10 Aligned_cols=358 Identities=14% Similarity=0.082 Sum_probs=228.4
Q ss_pred CchhhHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhh
Q 043156 24 GIKTSLLILAAFGFENLAT---IALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISG 100 (578)
Q Consensus 24 ~~r~~~~l~~~~~~~~~~~---~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~ 100 (578)
+.+..+..+...+++...+ ..+.+.++ .+.+++|.|..+.++..+.+.++..++.++.|+++||+ ||||++.++.
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~ 85 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGML-AVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGV 85 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHH
Confidence 4455555555444444433 33334444 35689999999999999999999999999999999998 9999999998
Q ss_pred hhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHH
Q 043156 101 SVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIG 180 (578)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG 180 (578)
++..++.++. ...++.+.+++.|++.|++.+...+...+++.|.+|+++ |.+..++.+....+|
T Consensus 86 ~~~~~~~~~~----------~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~ 149 (406)
T PRK15402 86 AFFILTCLAI----------LLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------AIKITALMANVALLA 149 (406)
T ss_pred HHHHHHHHHH----------HHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------HHHHHHHHHHHHHHH
Confidence 8777554443 334677788899999999999888888899999999876 889999988888899
Q ss_pred HHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhh
Q 043156 181 GAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYE 260 (578)
Q Consensus 181 ~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (578)
..++|.+++++.++.+|++.|++.+++.++..+..+...++.+.+++++ .+ ..
T Consensus 150 ~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------------------~~---- 202 (406)
T PRK15402 150 PLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEK-LS----------------------LK---- 202 (406)
T ss_pred HHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCcccccc-cc----------------------HH----
Confidence 9999999999988889999999888776665554433322211000000 00 00
Q ss_pred hchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccc
Q 043156 261 INMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQ 340 (578)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 340 (578)
+..+. ++ +...++ +.................+....
T Consensus 203 --------------------~~~~~-------------------~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 238 (406)
T PRK15402 203 --------------------ELGRD-------------------YK----LVLKNR-RFVAGALALGLVSLPLLAWIALS 238 (406)
T ss_pred --------------------HHHHH-------------------HH----HHHcCc-HHHHHHHHHHHHHHHHHHHHHHh
Confidence 00000 00 000111 11111111111111011111111
Q ss_pred hhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHH
Q 043156 341 TFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAI 420 (578)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~ 420 (578)
+.+..+..+.+. ...+.......+..++..++.+++.||..+| +.+.++.++..++++....
T Consensus 239 p~~~~~~~g~~~-------~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~-----------~~~~~~~~~~~~g~~~~~~ 300 (406)
T PRK15402 239 PVILISGEQLSS-------YEYGLLQVPVFGALIAGNLTLARLTSRRPLR-----------SLIRMGLWPMVAGLLLAAL 300 (406)
T ss_pred HHHHHHHhCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----------HHHHHHHHHHHHHHHHHHH
Confidence 222221111111 1111222223345666677788887776655 4566677777777766655
Q ss_pred HHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHH
Q 043156 421 FEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFS 500 (578)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg 500 (578)
.... ...+.++++...++.+++.+...+..+.... ..+++.||++.+..++.+.++..+|
T Consensus 301 ~~~~-------------------~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~g 360 (406)
T PRK15402 301 ATVI-------------------SSHAYLWLTAGLSLYAFGIGLANAGLYRLTL-FSSDVSKGTVSAAMGMLSMLIFTVG 360 (406)
T ss_pred HHHc-------------------ccccHHHHHHHHHHHHHHHHHHhhhHHHHHh-hhccccccHHHHHHHHHHHHHHHHH
Confidence 3310 1224566777788899999888777666554 4455899999999999999999999
Q ss_pred HHHHHhhh
Q 043156 501 TILVNIVN 508 (578)
Q Consensus 501 ~~~~~~~~ 508 (578)
+.+.+.+.
T Consensus 361 ~~~~~~l~ 368 (406)
T PRK15402 361 IELSKHAY 368 (406)
T ss_pred HHHHHhcc
Confidence 99988765
No 32
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.92 E-value=1.7e-23 Score=217.27 Aligned_cols=358 Identities=12% Similarity=0.040 Sum_probs=235.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcc
Q 043156 30 LILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPC 109 (578)
Q Consensus 30 ~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~ 109 (578)
.++...++..++.......++.|.. +++.+..+.+++.+.+.++..++.++.|+++||+ ||||++.++.++..++.++
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~ 80 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAV 80 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHH
Confidence 3456667777776666677777664 6899999999999999999999999999999998 9999999988776644333
Q ss_pred cccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 043156 110 NVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIV 189 (578)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~ 189 (578)
..+ .......+.+.+++.|++.|++.+...|+..+++.|++|+++ |++.+++.+...++|..++|.+++
T Consensus 81 ~~~-----~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~g~~l~~ 149 (365)
T TIGR00900 81 LPF-----VALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ------LTQANSLSQAVRSLFYIVGPGIGG 149 (365)
T ss_pred HHH-----HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHhHHHHHHHHHHHHHHHHHH
Confidence 200 000111378889999999999999999999999999999876 999999999999999999999999
Q ss_pred HhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhh
Q 043156 190 WIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAI 269 (578)
Q Consensus 190 ~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (578)
++.+..||++.|++.++..+++.+..+....+.+++++++ +. ++. ...
T Consensus 150 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------------------~~~--~~~-------- 197 (365)
T TIGR00900 150 LMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQ--AL--------------------SNA--VLR-------- 197 (365)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCcccc--cc--------------------chh--HHH--------
Confidence 9998899999999887766555444433322111000000 00 000 000
Q ss_pred hcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHH-HHHHHHHHHhhhccchhhhhhhc
Q 043156 270 ETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPI-FCCTIVMTLCLAQLQTFSIQQGL 348 (578)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 348 (578)
+.. ..++ .....+.+...... +.....+........+.+..+..
T Consensus 198 --------------~~~----------------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (365)
T TIGR00900 198 --------------DTR----------------EGIK-----FVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYL 242 (365)
T ss_pred --------------HHH----------------hHHH-----HHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 000 0000 00001111111111 11111111111122233322211
Q ss_pred cCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhh
Q 043156 349 TMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDV 428 (578)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~ 428 (578)
+.+. ...+.+.....+..++..++.+++.++..+| +.+..+.++.+++++...+..
T Consensus 243 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~------ 298 (365)
T TIGR00900 243 GRGS-------THYGWVLAAFGLGALLGALLLGLLGRYFKRM-----------ALMTGAIFVIGLAILVVGLTP------ 298 (365)
T ss_pred CCch-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhchh-----------HHHHHHHHHHHHHHHHHHhhc------
Confidence 1111 1123344455666777777777776555444 345556666666665555432
Q ss_pred hhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 043156 429 ARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVN 508 (578)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~ 508 (578)
+ +.+.+.+..++.+++.+...+...++..+.+|++.||++.|+.+....++..+++.+.+.+.
T Consensus 299 ----------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~ 361 (365)
T TIGR00900 299 ----------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLA 361 (365)
T ss_pred ----------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 25556667788899999999999999999999999999999999999999999999988775
No 33
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.92 E-value=1.6e-23 Score=226.20 Aligned_cols=379 Identities=14% Similarity=0.073 Sum_probs=230.5
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhHHHHHHHHH
Q 043156 56 VLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYL 135 (578)
Q Consensus 56 ~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 135 (578)
++|++..+.|++.+.+.+++.++.+++|+++||+ |||+++.++.+++.++.++. ......+...+++.|++
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~r~~ 140 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVI--------PWAAGGGIALVVFCRVI 140 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHH--------HHHHHcCchHHHHHHHH
Confidence 7899999999999999999999999999999998 99999999988877554442 11222446678899999
Q ss_pred HHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcccc-CchhHHHHHHHHHHHHHHH
Q 043156 136 IATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNK-GWDRGFGLSSVAVFLATII 214 (578)
Q Consensus 136 ~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~-g~~~~f~i~~~~~~~~~~~ 214 (578)
+|++.+...|....+++|++|+++ |++++++.+.+.++|..++|.+++++.+.+ |||+.|++.++..++..+.
T Consensus 141 ~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~ 214 (465)
T TIGR00894 141 QGLAQGSVSPATHKIIVKWAPPKE------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLL 214 (465)
T ss_pred HHHhcccchhhHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHH
Confidence 999999999999999999999887 999999999999999999999999998884 9999999988876665555
Q ss_pred HHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhcccCCCCCccchhhHhhhhccCcc
Q 043156 215 FAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTE 294 (578)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (578)
++...++.+++++.. +.. +++..+ + .....+. .
T Consensus 215 ~~~~~~~~p~~~~~~-~~~---------------------~~~~i~-----~------~~~~~~~-------------~- 247 (465)
T TIGR00894 215 WFVFPADDPSIHPCI-SKF---------------------EKKYIN-----S------SLQGQKG-------------S- 247 (465)
T ss_pred HHHHhcCCcccCCCC-CHH---------------------HHHHHH-----h------hcccccC-------------C-
Confidence 444333222111110 000 000000 0 0000000 0
Q ss_pred ccccccCCCCCccccchhhhhHHHHHh-HHHHHHHHHHHHHhhhccchhhhhhhccCCCCCCCceeeCCCcccCchhHHH
Q 043156 295 NLEITEAPNPWKLCRVTQVENAKIILG-MIPIFCCTIVMTLCLAQLQTFSIQQGLTMDTSVTTSFHIPPASLPILPILFM 373 (578)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 373 (578)
.....+|+ .....+.+.. .+..++....++....+.+.++ .+..+.+. ...+.+.....+..
T Consensus 248 ----~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l-~~~~g~s~-------~~~g~~~~~~~~~~ 310 (465)
T TIGR00894 248 ----TRQSLPIK-----AIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFI-SWVLRVSG-------KENGLLSSLPYLFA 310 (465)
T ss_pred ----CCCCCCHH-----HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCcCh-------HHhHHHHHHHHHHH
Confidence 00001221 0111111111 1111222222222223333333 22222221 12344555667778
Q ss_pred HHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHH
Q 043156 374 ILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSI 453 (578)
Q Consensus 374 il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 453 (578)
++..++.+++.|++.+|..... ....++..+..+...+...+.... ...+.+..+.
T Consensus 311 ~i~~~~~g~l~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~ 366 (465)
T TIGR00894 311 WLCSIFAGYLADFLKSSKTLSL---TAARKIFNGIGGLGPGIFAYALPY---------------------LSAAFYLTII 366 (465)
T ss_pred HHHHHHHHHHHHHHHHcCCCcH---HHHHHHHHHHHHHHHHHHHHHHHH---------------------cCCchHHHHH
Confidence 8888999999988776531110 001112222211111111111111 0112233333
Q ss_pred HHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHH
Q 043156 454 QFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNL 533 (578)
Q Consensus 454 ~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (578)
.+.+.+.+.+...+..+....+.+|+ .+|..+|+.++...+++.+++.+.+.+.+.. ..+.|..
T Consensus 367 ~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~---------------~~~~~~~ 430 (465)
T TIGR00894 367 ILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQD---------------SKNVWLI 430 (465)
T ss_pred HHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCC---------------CchHHHH
Confidence 34444444444555555666677776 8999999999999999999999888665211 1134778
Q ss_pred HHHHHHHHHHHHHHHHhhhc
Q 043156 534 FFWLLSALSFINFSVYLFMS 553 (578)
Q Consensus 534 ~f~~~~~~~~i~~i~~~~~~ 553 (578)
.|.+.+++.+++.+++.++.
T Consensus 431 ~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 431 VFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred HHHHHHHHHHHHHHHeeeee
Confidence 89999989998888776643
No 34
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.92 E-value=2.2e-23 Score=225.96 Aligned_cols=401 Identities=15% Similarity=0.113 Sum_probs=248.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccC
Q 043156 27 TSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLP 106 (578)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~ 106 (578)
....+++..++..+........+ .++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++++.+++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~ 80 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAI-PTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 34555566666666655554444 466789999999999999999999999999999999998 9999999999988877
Q ss_pred CcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 043156 107 PPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVT 186 (578)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~ 186 (578)
.++. ...++...+++.|+++|++.+...|...+++.|.+|+++ |++++++++....+|..++|.
T Consensus 81 ~~~~----------~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~g~~~g~~ 144 (485)
T TIGR00711 81 SLLC----------GVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK------RGRAMAIWGLTVLVAPALGPT 144 (485)
T ss_pred HHHH----------hCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHhhhhhc
Confidence 6554 445788889999999999999999999999999999876 999999999999999999999
Q ss_pred HHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHH---H--HHHHHHHhcccCCCCCchhhhhh
Q 043156 187 LIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEII---Q--VYVAAIRNRKLELPEDPMELYEI 261 (578)
Q Consensus 187 l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~ 261 (578)
+++++.++++||+.|++.+...++..+...+..++.++++.++.+...... . .+.....+.......++......
T Consensus 145 ~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (485)
T TIGR00711 145 LGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILIL 224 (485)
T ss_pred cHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHH
Confidence 999999999999999998877665555444443322111111101110000 0 00000000000000000000000
Q ss_pred chhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccch
Q 043156 262 NMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQT 341 (578)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~ 341 (578)
...... ....+... +.+ ...|... .+..++++.....+..+.....++..... .+
T Consensus 225 -~~~~~~---------~~~~~~~~-~~~-----------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p 279 (485)
T TIGR00711 225 -SITGLV---------AIIAFVVW-ELT-----------DDNPLVD--LRLFKYRNFTIGCVYMSLLGLGLYGSFYL-LP 279 (485)
T ss_pred -HHHHHH---------HHHHHHHH-HHc-----------CCCCccC--HHHHcCCChHHHHHHHHHHHHHHHHHHHH-HH
Confidence 000000 00000000 000 0011100 00011111111111111111111211111 12
Q ss_pred hhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHH
Q 043156 342 FSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIF 421 (578)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~ 421 (578)
.+.++..+.+. ...+.+.....+..++..++.+++.||.++| +.+.+|..+.+++..++.+.
T Consensus 280 ~~~~~~~g~s~-------~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-----------~~~~~g~~~~~~~~~~~~~~ 341 (485)
T TIGR00711 280 LYLQQVLGYTA-------LQAGLHILPVGLAPMLSSPIAGRMGDKIDPR-----------KLVTIGLILYAVGFYWRAFT 341 (485)
T ss_pred HHHHHhcCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHhhcCcH-----------HHHHHHHHHHHHHHHHHhcc
Confidence 22222111111 1223455556677888899999998877766 45666777777777665521
Q ss_pred HHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHH
Q 043156 422 EVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFST 501 (578)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~ 501 (578)
. ..+.+.+......++.|++.+...++......+..|++++|++.|+.++.+.+|+.+|+
T Consensus 342 ~--------------------~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~ 401 (485)
T TIGR00711 342 F--------------------TPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGT 401 (485)
T ss_pred C--------------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence 1 11234555666678889999988888888888999999999999999999999999999
Q ss_pred HHHHhhh
Q 043156 502 ILVNIVN 508 (578)
Q Consensus 502 ~~~~~~~ 508 (578)
.+.+.+.
T Consensus 402 ~i~g~~~ 408 (485)
T TIGR00711 402 ALITTIL 408 (485)
T ss_pred HHHHHHH
Confidence 9888765
No 35
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.92 E-value=2.5e-23 Score=217.65 Aligned_cols=368 Identities=12% Similarity=0.065 Sum_probs=233.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhh-hhhhccCCccc
Q 043156 32 LAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLIS-GSVEFLPPPCN 110 (578)
Q Consensus 32 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~-~~~~~~~~~~~ 110 (578)
++..++..++.....+.++.|+++++|.|..+.|++.+.+.+...+..++.|+++||+ ||||.+++. .+...++.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHH
Confidence 4567778888888889999999999999999999999999999999999999999998 999876654 44433332222
Q ss_pred ccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhH--HHHHHHHHHHHHHHHHHHH
Q 043156 111 VFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSF--FNLLFLAVCIGGAISVTLI 188 (578)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~--~~~~~~~~~lG~~~~p~l~ 188 (578)
..+++++.+++.|++++.+.+...|...++..|..|+++ |.+. .+..+...++|..++|.++
T Consensus 82 ----------~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~g~~ig~~~~ 145 (375)
T TIGR00899 82 ----------AWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTG------REAVMFSSVMRAQISLAWVIGPPLA 145 (375)
T ss_pred ----------HhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc------hhhHHHHHHHHHHHhHHHHHhhhHH
Confidence 334677778888888887777777877788888877654 5544 5778888899999999999
Q ss_pred HHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhh
Q 043156 189 VWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAA 268 (578)
Q Consensus 189 ~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (578)
+++.+.++||+.|++.+++.++..+..++..++.+++++++ + .
T Consensus 146 ~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----------------------~------------- 188 (375)
T TIGR00899 146 FWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGA-L-----------------------T------------- 188 (375)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccc-c-----------------------C-------------
Confidence 99998899999999988876655554444333221111000 0 0
Q ss_pred hhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccchhhhhhhc
Q 043156 269 IETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQTFSIQQGL 348 (578)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (578)
..+. . ..++ .++.+... ...+............. +.+..+..
T Consensus 189 ----------~~~~---~----------------~~~~------~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~ 230 (375)
T TIGR00899 189 ----------RLEV---R----------------GLLA------SRDTRLLF--VACTLMWGCNILYIINM-PLLIIHEL 230 (375)
T ss_pred ----------cchh---h----------------hhhc------CcchHHHH--HHHHHHHHHHHHHHhhh-HHHHHHHc
Confidence 0000 0 0000 00011111 01111111111111112 22222211
Q ss_pred cCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhh
Q 043156 349 TMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDV 428 (578)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~ 428 (578)
+.+.. ..+.+........+...++.+++.||+.+| +.+.++.++..+.++......
T Consensus 231 g~~~~-------~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~-----------~~~~~~~~~~~~~~~~~~~~~------ 286 (375)
T TIGR00899 231 GLPDK-------LAGLMMGTAAGLEIPFMLLAGYLIKRFGKR-----------RLMLLAALAGVAFYTGLAADN------ 286 (375)
T ss_pred CCCHH-------HHHHHHHHHHHHHHHHHHhHHHHHHHhcch-----------hHHHHHHHHHHHHHHHHHHHH------
Confidence 11111 112222333344455567778888777666 234445444444433333221
Q ss_pred hhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 043156 429 ARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVN 508 (578)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~ 508 (578)
+.+.+....++.+++.+...+..+.+..+..|++ +++++++.+...++|..+++.+.+.+.
T Consensus 287 ------------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~ 347 (375)
T TIGR00899 287 ------------------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILA 347 (375)
T ss_pred ------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455566778877777888888888888875 579999999999999999999998776
Q ss_pred ccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhh
Q 043156 509 SATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFM 552 (578)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 552 (578)
+. .+++..|+..+++++++.++..++
T Consensus 348 ~~------------------~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 348 ER------------------WSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred Hh------------------ccchhHHHHHHHHHHHHHHHHhee
Confidence 21 235577888888888887776553
No 36
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.92 E-value=7.4e-24 Score=220.93 Aligned_cols=357 Identities=12% Similarity=0.047 Sum_probs=230.8
Q ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCcccc
Q 043156 42 TIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKI 121 (578)
Q Consensus 42 ~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (578)
.|. .+.+.+++.+++|+|.++.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++. .
T Consensus 19 ~~~-~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~----------~ 86 (377)
T TIGR00890 19 VYT-WTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFY----------A 86 (377)
T ss_pred Hhh-hhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHH----------H
Confidence 443 34456788899999999999999999999999999999999998 99999999998888665553 4
Q ss_pred ccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHH
Q 043156 122 EGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGF 201 (578)
Q Consensus 122 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f 201 (578)
..++...+++.|.+.|++.+...+.....+.|++|+ + |+++.++...+.++|..+++.+.+.+.+..+||+.|
T Consensus 87 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f 159 (377)
T TIGR00890 87 IADSLAALYLTYGLASAGVGIAYGIALNTAVKWFPD-K------RGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAF 159 (377)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCc-c------cHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHH
Confidence 557888899999999999998888878888888874 3 899999999999999888777777777778999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhcccCCCCCccc
Q 043156 202 GLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIETEFLPHRDIFR 281 (578)
Q Consensus 202 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (578)
++.++..++..+..++..++.+++++++ ..+.. + .+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~----~-----------------~~~~ 197 (377)
T TIGR00890 160 IYMGIIFLLVIVLGAFLIGYPPGQLIKT---------------------NIEVS----V-----------------KDYT 197 (377)
T ss_pred HHHHHHHHHHHHHHHHheecCchhcccc---------------------Ccccc----h-----------------hhhh
Confidence 9988776655544433322111100000 00000 0 0000
Q ss_pred hhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccchhhhhhhccCCCCCCCceeeC
Q 043156 282 FLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQTFSIQQGLTMDTSVTTSFHIP 361 (578)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (578)
. . +..++++........++....... .......+.+ +.... ...
T Consensus 198 ~---~------------------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~---~~~ 241 (377)
T TIGR00890 198 V---W------------------------EMLRTPQFWVLYLSFFLNAVSGLL-LIGLYKPYGQ-----SLGLS---DGF 241 (377)
T ss_pred H---H------------------------HHHcCccHHHHHHHHHHHhHHHHH-HHHHHHHHHH-----HcCCC---HHH
Confidence 0 0 000011111111111111111100 1111111111 11111 111
Q ss_pred CCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCC
Q 043156 362 PASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVV 441 (578)
Q Consensus 362 ~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (578)
.+.+.....+..++..++.+++.||+.|| +.+.++.++..++++.+....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----------~~~~~~~~~~~~~~~~~~~~~------------------- 291 (377)
T TIGR00890 242 LVLAVSISSIFNGGGRPFLGALSDKIGRQ-----------KTMSIVFGISAVGMAAMLFIP------------------- 291 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----------hhhhHHHHHHHHHHHHHHHcc-------------------
Confidence 22344556677788888899999887776 345566667766665554422
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCc
Q 043156 442 QPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWL 521 (578)
Q Consensus 442 ~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~ 521 (578)
..+.+.+....++.+++.+...+....+..+..|++.||++.|+.+....+|+.+++.+.+.+.+
T Consensus 292 ---~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~------------ 356 (377)
T TIGR00890 292 ---MLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALT------------ 356 (377)
T ss_pred ---cchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHh------------
Confidence 11222232334455666665566667788899999999999999999999999999999987762
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHH
Q 043156 522 AGNNINRNHLNLFFWLLSALSFINF 546 (578)
Q Consensus 522 ~~~~~~~~~~~~~f~~~~~~~~i~~ 546 (578)
..+|+..|++.++++++++
T Consensus 357 ------~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 357 ------EIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred ------hhchhhHHHHHHHHHHHhc
Confidence 1235567887777777654
No 37
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.92 E-value=1.3e-22 Score=220.47 Aligned_cols=168 Identities=13% Similarity=0.050 Sum_probs=129.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-HHH-----HHHHHHHHHHHHHhHHHHHhhhccchhhhhhh
Q 043156 25 IKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAE-AAN-----QVTNYMGTSYILSIVVALLADAFIGRFKAVLI 98 (578)
Q Consensus 25 ~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~-~~~-----~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~ 98 (578)
+|..+...+..+++.+.+.. ..+...++.++++.+.++ ..+ +.+...++..++.++.|+++||+ |||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGV-YGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 45566667788888887665 455666888888644322 122 24666788999999999999998 99999999
Q ss_pred hhhhhccCCcccccCCCCCccccccchhH--------HHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHH
Q 043156 99 SGSVEFLPPPCNVFDPTAGCKKIEGSDAA--------LLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFF 170 (578)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~ 170 (578)
+.++++++.++. +..+++. ++++.|+++|+|.|...+...++++|++|+++ |++..
T Consensus 93 ~~~l~~i~~~~~----------a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~------Rg~~~ 156 (490)
T PRK10642 93 TIVIMSISTFCI----------GLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK------RGFMG 156 (490)
T ss_pred HHHHHHHHHHHH----------HhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC------CcHHH
Confidence 999999776664 3344443 48899999999999999999999999999987 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc--------cccCchhHHHHHHHHHHH
Q 043156 171 NLLFLAVCIGGAISVTLIVWIQ--------DNKGWDRGFGLSSVAVFL 210 (578)
Q Consensus 171 ~~~~~~~~lG~~~~p~l~~~l~--------~~~g~~~~f~i~~~~~~~ 210 (578)
++...+.++|..+|+.+...+. .++|||++|++.++..++
T Consensus 157 ~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~ 204 (490)
T PRK10642 157 SWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII 204 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH
Confidence 9998888888888876654442 257999999997655443
No 38
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.92 E-value=4.9e-23 Score=216.58 Aligned_cols=174 Identities=9% Similarity=0.041 Sum_probs=150.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhc
Q 043156 25 IKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEF 104 (578)
Q Consensus 25 ~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~ 104 (578)
+|.++.+.+..+......+...+.++ .+++++|++.++.+++.+.+.++..++.++.|+++||+ ||||++.++.++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~ 79 (382)
T PRK10091 2 KKVILSLALGTFGLGMAEFGIMGVLT-ELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCV 79 (382)
T ss_pred cchHHHHHHHHHHHHhhHHHHHhChH-HHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHH
Confidence 45677788888888888777777775 45789999999999999999999999999999999998 99999999999988
Q ss_pred cCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHH
Q 043156 105 LPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAIS 184 (578)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~ 184 (578)
++.++. ...++.+.+++.|++.|++.+...+....++.|++|+++ |++.++++..+..+|..++
T Consensus 80 ~~~~l~----------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~g 143 (382)
T PRK10091 80 IGNAMF----------TLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK------VTAAVAGMVSGMTVANLLG 143 (382)
T ss_pred HHHHHH----------HHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH------hhHHHHHHHHHHHHHHHHh
Confidence 776554 456788999999999999999888888888999998775 8999999999999999999
Q ss_pred HHHHHHhccccCchhHHHHHHHHHHHHHHHHH
Q 043156 185 VTLIVWIQDNKGWDRGFGLSSVAVFLATIIFA 216 (578)
Q Consensus 185 p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~ 216 (578)
|.+++++.+..+||+.|++.++..++..+..+
T Consensus 144 ~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 175 (382)
T PRK10091 144 IPLGTYLSQEFSWRYTFLLIAVFNIAVLASIY 175 (382)
T ss_pred ccHHHHHhhhccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888999999998877655544433
No 39
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.92 E-value=2.9e-23 Score=223.27 Aligned_cols=176 Identities=11% Similarity=0.020 Sum_probs=130.2
Q ss_pred hHHHHHHHHHHHHHHHHH---HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhc
Q 043156 28 SLLILAAFGFENLATIAL---GVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEF 104 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~---~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~ 104 (578)
-|.++...++....+|.. ..+...|+.++ |+|..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~ 104 (452)
T PRK11273 27 RWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAA 104 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHH
Confidence 344444444445555543 23444577777 99999999999999999999999999999998 99999999988877
Q ss_pred cCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHH-H
Q 043156 105 LPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGA-I 183 (578)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~-~ 183 (578)
++.++.. .......+...+++.|++.|++.+...|.....+.|++|+++ |++++++++.+.++|+. .
T Consensus 105 i~~~~~~------~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~ 172 (452)
T PRK11273 105 AVMLFMG------FVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCAHNVGGGLP 172 (452)
T ss_pred HHHHHHH------hhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH------HHHHHHHHHHHHHhhhhHH
Confidence 5544420 000112356678889999999999988888888999999876 99999999999999874 5
Q ss_pred HHHHHHHhccccCchhHHHHHHHHHHHHHHHHHh
Q 043156 184 SVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAA 217 (578)
Q Consensus 184 ~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~ 217 (578)
+|.++..+....+||+.|++.+++.++..+..++
T Consensus 173 ~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~ 206 (452)
T PRK11273 173 PLLFLLGMAWFNDWHAALYMPAFAAILVALFAFA 206 (452)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 5554433433458999999987765554443333
No 40
>PRK09952 shikimate transporter; Provisional
Probab=99.91 E-value=2.1e-22 Score=215.65 Aligned_cols=389 Identities=13% Similarity=0.084 Sum_probs=230.3
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCHHHHHHHHH-----HHHHHHHHHHhHHHHHhhhccchhhh
Q 043156 23 GGIKTSLLILAAFGFENLATIALGVNLVTYFNGVL--HLDLAEAANQVT-----NYMGTSYILSIVVALLADAFIGRFKA 95 (578)
Q Consensus 23 ~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~l--g~s~~~~~~~~~-----~~~~~~~~~~~~~G~laD~~~Grr~~ 95 (578)
.++|..+...+..+++.+.........+.++.+++ +.++. .+++.+ ...++..++.++.|+++||+ |||++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~~ 96 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKRM 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHHH
Confidence 34566777777888888877765555555666665 67766 455432 23445667778889999998 99999
Q ss_pred hhhhhhhhccCCcccccCCCCCccccccchhH--------HHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhh
Q 043156 96 VLISGSVEFLPPPCNVFDPTAGCKKIEGSDAA--------LLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMS 167 (578)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~ 167 (578)
+.++.++++++.++. ...++.. .+++.|+++|++.|...|....++.|++|+++ |+
T Consensus 97 l~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------rg 160 (438)
T PRK09952 97 LMLTVWMMGIATALI----------GLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNK------KA 160 (438)
T ss_pred HHHHHHHHHHHHHHH----------hcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCC------Cc
Confidence 999999988776554 2334433 58889999999999999999999999999987 99
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhc--------cccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHH
Q 043156 168 SFFNLLFLAVCIGGAISVTLIVWIQ--------DNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQV 239 (578)
Q Consensus 168 ~~~~~~~~~~~lG~~~~p~l~~~l~--------~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (578)
+..+..+.+..+|..+++.+..++. .++|||++|++.++..++.. +. ++. .|+ +
T Consensus 161 ~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~---~l-~~~----~~e--s-------- 222 (438)
T PRK09952 161 FYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIAL---WV-RNG----MEE--S-------- 222 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHH---HH-HHh----CCC--C--------
Confidence 9999999999999988877776654 25799999998776543322 11 111 111 1
Q ss_pred HHHHHHhcccCCCCCchhhhhhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHH
Q 043156 240 YVAAIRNRKLELPEDPMELYEINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKII 319 (578)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 319 (578)
+++.....+.++. .+. .++. +...++++..
T Consensus 223 ---------------~~~~~~~~~~~~~---------~~~-----------------------~~~~---~~l~~~~~~~ 252 (438)
T PRK09952 223 ---------------AEFEQQQHEQAAA---------KKR-----------------------IPVI---EALLRHPGAF 252 (438)
T ss_pred ---------------hhHHHHHhhcccc---------ccc-----------------------CCHH---HHHHHchHHH
Confidence 1000000000000 000 0000 0001111221
Q ss_pred HhHHHH-HHHHHHHHHhhhccchhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCC
Q 043156 320 LGMIPI-FCCTIVMTLCLAQLQTFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGI 398 (578)
Q Consensus 320 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~ 398 (578)
...... ++....++......+++. .+..+++... .........+..++..++.+++.||++||
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~y~-~~~~g~s~~~-------~~~~~~~~g~~~~i~~~~~g~l~Dr~grr-------- 316 (438)
T PRK09952 253 LKIIALRLCELLTMYIVTAFALNYS-TQNLGLPREL-------FLNIGLLVGGLSCLTIPCFAWLADRFGRR-------- 316 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCCCHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHhCch--------
Confidence 111111 112222333222222222 2211111110 00112223445566777889999888877
Q ss_pred CchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCC
Q 043156 399 THLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAP 478 (578)
Q Consensus 399 ~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P 478 (578)
+.+..+.++..++.+....... ...+.+.++...++.+++.+...+..+.+..|.+|
T Consensus 317 ---~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p 373 (438)
T PRK09952 317 ---RVYITGALIGTLSAFPFFMALE--------------------AQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFG 373 (438)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHH--------------------cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 3344555544444332222110 01122333344555677777777888889999999
Q ss_pred chhhHHHHHHHH-HHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhh
Q 043156 479 KGIKSLSTCFLW-CSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFM 552 (578)
Q Consensus 479 ~~~rg~~~g~~~-~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 552 (578)
++.|+++.|+.+ ..+.+++.++|.+.+.+.+.+ .++|...+...+++.+++.+..+.+
T Consensus 374 ~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~----------------~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 374 ASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYF----------------GGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred cchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc----------------CCCchHHHHHHHHHHHHHHHHHHHc
Confidence 999999999954 445689999999988776322 0124456777777777777776654
No 41
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.91 E-value=8.9e-23 Score=215.37 Aligned_cols=175 Identities=14% Similarity=0.177 Sum_probs=149.2
Q ss_pred cccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhh
Q 043156 20 YKHGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLIS 99 (578)
Q Consensus 20 ~~~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~ 99 (578)
..+.+++......+..+...+..+.+....+ .+++++|+|..+.+++.+.+.++..++.++.|+++||+ |||+++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~ 83 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLA-EVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTS 83 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHH
Confidence 3456778888888888888888776655554 66889999999999999999999999999999999998 999999999
Q ss_pred hhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHH
Q 043156 100 GSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCI 179 (578)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~l 179 (578)
.++..++.++. ....++..+++.|++.|++.+...+...+++.|++|+++ |++++++.+.+.++
T Consensus 84 ~~~~~~~~~~~----------~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~ 147 (405)
T TIGR00891 84 IVLFSAGTLAC----------GFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL------RNKASGLLISGYAV 147 (405)
T ss_pred HHHHHHHHHHH----------HHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh------hhHHHHHHHHHHHH
Confidence 88877665443 334678889999999999999999999999999999887 99999999999999
Q ss_pred HHHHHHHHHHHhccccC--chhHHHHHHHHHHHHH
Q 043156 180 GGAISVTLIVWIQDNKG--WDRGFGLSSVAVFLAT 212 (578)
Q Consensus 180 G~~~~p~l~~~l~~~~g--~~~~f~i~~~~~~~~~ 212 (578)
|..+++.+++.+.+..+ ||+.|++.++..++..
T Consensus 148 g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~ 182 (405)
T TIGR00891 148 GAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL 182 (405)
T ss_pred HHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 99999999998887665 9999988665544443
No 42
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.91 E-value=8.4e-23 Score=210.49 Aligned_cols=348 Identities=19% Similarity=0.208 Sum_probs=261.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCc
Q 043156 29 LLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPP 108 (578)
Q Consensus 29 ~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~ 108 (578)
+.+....+...+..+...+..+.|. +++|.+..+.+++.+...++..++.++.|+++||+ ||||.+.++.++..++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~ 79 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSL 79 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHH
Confidence 3455677778888887777777765 56799999999999999999999999999999998 999999999988886655
Q ss_pred ccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 043156 109 CNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLI 188 (578)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~ 188 (578)
+. ....+...+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+...++|..++|.++
T Consensus 80 ~~----------~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~ 143 (352)
T cd06174 80 LL----------AFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------RGRALGLFSAGFGLGALLGPLLG 143 (352)
T ss_pred HH----------HHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------hhhhhhHHHHHHHHHHHHHHHHH
Confidence 43 333678889999999999999999999999999999977 99999999999999999999999
Q ss_pred HHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhh
Q 043156 189 VWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAA 268 (578)
Q Consensus 189 ~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (578)
+++.+..+|++.|++.++..++..+...+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------- 174 (352)
T cd06174 144 GLLAESLGWRWLFLILAILGLLLALLLLFLL------------------------------------------------- 174 (352)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-------------------------------------------------
Confidence 9999888999999998877666554433211
Q ss_pred hhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccchhhhhhhc
Q 043156 269 IETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQTFSIQQGL 348 (578)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (578)
|+.................+....+.+..+..
T Consensus 175 ------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (352)
T cd06174 175 ------------------------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVL 206 (352)
T ss_pred ------------------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 00000111111111111111111122222111
Q ss_pred cCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchh-hHhHhHHHHHHHHHHHHHHHHHHHh
Q 043156 349 TMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQ-RVGVGLVLSCISMAIAAIFEVIRKD 427 (578)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~-~~~iG~~~~~~~~~~~~~~~~~~~~ 427 (578)
+.+ ....+.+.....+..++..++.+++.||.++| + .+..+.++..++.+......
T Consensus 207 ~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~i~~~~~~~~~----- 263 (352)
T cd06174 207 GLS-------AAEAGLLLSLFGLGGILGALLGGLLSDRLGRR-----------RLLLLIGLLLAALGLLLLALAP----- 263 (352)
T ss_pred CCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----------hHHHHHHHHHHHHHHHHHHHhc-----
Confidence 111 11233455666788888888888888877766 3 56677888877777666533
Q ss_pred hhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043156 428 VARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIV 507 (578)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~ 507 (578)
+.+......++.+++.+...+...++..+..|++.|++.+|+.+...++++.+++.+.+.+
T Consensus 264 -------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l 324 (352)
T cd06174 264 -------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLL 324 (352)
T ss_pred -------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566777888999999999999999999999999999999999999999999999999887
Q ss_pred hccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhh
Q 043156 508 NSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLF 551 (578)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 551 (578)
.+ ..+++..|++.+++.+++.+.+++
T Consensus 325 ~~------------------~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 325 LD------------------TGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred hc------------------ccCcchHHHHHHHHHHHHHHHhee
Confidence 62 123456788888888888776654
No 43
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.91 E-value=4.1e-23 Score=219.32 Aligned_cols=373 Identities=18% Similarity=0.212 Sum_probs=256.3
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhHHHHHHHH
Q 043156 55 GVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALY 134 (578)
Q Consensus 55 ~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (578)
.++++|.++.+++.+.+..++.++.+++|+++||+ |-|+++.++.++.++++++. +.+...+...+++.|+
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~--------P~aa~~~~~~~~~~R~ 136 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLT--------PLAASIGFYLLLVLRF 136 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHH--------HHHHHhcchhhHHHHH
Confidence 36889999999999999999999999999999998 99999999999999777664 2233345557799999
Q ss_pred HHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccc-cCchhHHHHHHHHHHHHHH
Q 043156 135 LIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDN-KGWDRGFGLSSVAVFLATI 213 (578)
Q Consensus 135 l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~-~g~~~~f~i~~~~~~~~~~ 213 (578)
++|++.|...|+...+.+.+.|++| |++..++.+.+..+|.+++-.++|++.+. .||+++|++.+++.++..+
T Consensus 137 lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~ 210 (466)
T KOG2532|consen 137 LQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFI 210 (466)
T ss_pred HhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHH
Confidence 9999999999999999999999998 99999999999999999999999999988 9999999999999888777
Q ss_pred HHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhcccCCCCCccchhhHhhhhccCc
Q 043156 214 IFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIETEFLPHRDIFRFLDKAAIQKTST 293 (578)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (578)
++++...+.+.++|.- .+++.+..+.+ +......
T Consensus 211 ~w~~~~~d~P~~h~~i----------------------s~~El~~I~~~------------------------k~~~~~~ 244 (466)
T KOG2532|consen 211 LWFLFYSDSPSKHPNI----------------------SEKELKYIEKG------------------------KSEAHVK 244 (466)
T ss_pred HHHHHhcCCcccCCCC----------------------CHHHHHHHHhc------------------------ccccccC
Confidence 7666554433332221 11111111111 0000000
Q ss_pred cccccccCCCCCccccchhhhhHHHHHhHHHH-------HHHHHHHHHhhhccchhhhhhhccCCCCCCCceeeCCCccc
Q 043156 294 ENLEITEAPNPWKLCRVTQVENAKIILGMIPI-------FCCTIVMTLCLAQLQTFSIQQGLTMDTSVTTSFHIPPASLP 366 (578)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (578)
.....||+ ++++..++ ++-...++.+..+.+++ +.+..+.+. -..+.+.
T Consensus 245 -----~~~~vP~~-----------~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY-~~~VL~f~v-------~~~G~~s 300 (466)
T KOG2532|consen 245 -----KKPPVPYK-----------AILTSPPVWAIWISAFGGNWGFYLLLTYLPTY-LKEVLGFDV-------RETGFLS 300 (466)
T ss_pred -----CCCCCCHH-----------HHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHH-HHHHhCCCh-------hhhhHHH
Confidence 00124654 22222222 22233333333333333 333333332 2466788
Q ss_pred CchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhH--hHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCc
Q 043156 367 ILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRV--GVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPL 444 (578)
Q Consensus 367 ~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~--~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (578)
+++.+...+...+.+.+.|++.+| . ...+..+|+ .++....+++++.+++... .+.
T Consensus 301 alP~l~~~~~k~~~g~lsD~l~~~-~---ls~t~~rkifn~i~~~~~ai~l~~l~~~~~------------------~~~ 358 (466)
T KOG2532|consen 301 ALPFLAMAIVKFVAGQLSDRLTFR-I---LSETTVRKIFNTIAFGGPAVFLLVLAFTSD------------------EHR 358 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-c---CchHhHHHHHHhHHHHHHHHHHHeeeecCC------------------Ccc
Confidence 888899999999999999998886 2 122333344 5567777777776666430 011
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCC
Q 043156 445 PISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGN 524 (578)
Q Consensus 445 ~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 524 (578)
......+.+...+.|+..+..... ....-+++.+..+|+.+....++++++|++++.+.+ +
T Consensus 359 ~~a~~~l~~~~~~~g~~~~Gf~~~-----~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~--------------~ 419 (466)
T KOG2532|consen 359 LLAVILLTIAIGLSGFNISGFYKN-----HQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVT--------------D 419 (466)
T ss_pred hHHHHHHHHHHHHcccchhhhHhh-----hhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeC--------------C
Confidence 123333333333334433333322 233135779999999999999999999999998763 1
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHhhhcc
Q 043156 525 NINRNHLNLFFWLLSALSFINFSVYLFMSS 554 (578)
Q Consensus 525 ~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 554 (578)
+ +...|+.+|++.+++.+++.++|.++.+
T Consensus 420 ~-t~~eW~~VF~i~a~i~~~~~i~f~~f~s 448 (466)
T KOG2532|consen 420 N-TREEWRIVFLIAAGILIVGNIIFLFFGS 448 (466)
T ss_pred C-CHHHHHHHHHHHHHHHHHhchheeEeec
Confidence 1 3467889999999999999999988864
No 44
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.91 E-value=5.5e-24 Score=220.06 Aligned_cols=350 Identities=18% Similarity=0.217 Sum_probs=229.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccc
Q 043156 32 LAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNV 111 (578)
Q Consensus 32 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~ 111 (578)
++..++..+......+.++.++.+++|.|..+.+++.+.+.++..++.++.|+++||+ ||||++.++.++.+++.++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~- 79 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLL- 79 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHH-
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHh-
Confidence 4556666777776677777688999999999999999999999999999999999998 99999999999988773332
Q ss_pred cCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 043156 112 FDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWI 191 (578)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l 191 (578)
....+.+.+++.|++.|++.+...++..+++.|++|+++ |++.+++.+...++|..++|.+++++
T Consensus 80 ---------~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~g~~~g~~l~~~l 144 (352)
T PF07690_consen 80 ---------AFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------RGRAFGILSAGFSLGSILGPLLGGFL 144 (352)
T ss_dssp ---------HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ---------hhhhhHHHHhhhccccccccccccccccccccccchhhh------hhhccccccchhhhhhhcccchhhhh
Confidence 222555589999999999999999999999999999987 99999999999999999999999999
Q ss_pred ccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhc
Q 043156 192 QDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIET 271 (578)
Q Consensus 192 ~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (578)
.+.++|++.|++.++..++..++.....++.+++++.. + +.+.+ +
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~-~---------------------~~~~~--~----------- 189 (352)
T PF07690_consen 145 ISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERE-S---------------------PKESE--S----------- 189 (352)
T ss_dssp CCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT---S---------------------STTTT--------------
T ss_pred hhccccccccccccchhhhhhhhHhhhhhhcccccccc-c---------------------ccccc--c-----------
Confidence 98889999999998887777664333332211111110 0 00000 0
Q ss_pred ccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHH-hHHHHHHHHHHHHHhhhccchhhhhhhccC
Q 043156 272 EFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIIL-GMIPIFCCTIVMTLCLAQLQTFSIQQGLTM 350 (578)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (578)
+.. .+++... +.....+... .....+.....+... ....+.+..+..+.
T Consensus 190 ------------~~~----------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~ 239 (352)
T PF07690_consen 190 ------------KKP----------------KPLKPGF-KSLFKNPVLWILLIAFFLFFFVFSGF-SFFLPLYLQEVLGF 239 (352)
T ss_dssp -------------HH----------------HCCCH-C-THHHHHHCCHHHHHHHHHHHHHHHHH-HHHHHHHCCHHHHC
T ss_pred ------------ccc----------------ccccccc-ccccccchhhhhhhhhhHHHHHHHHh-hcccchhhhhccCC
Confidence 000 0110000 0111111111 111111111122221 11112221221122
Q ss_pred CCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhh
Q 043156 351 DTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVAR 430 (578)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~ 430 (578)
+ + ....+.+.....+..++..++.+++.||+.+| +...+......++.+.+....
T Consensus 240 ~---~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~-------- 294 (352)
T PF07690_consen 240 S---G---PSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR-----------RRLLIAILLLILGALGLLLLP-------- 294 (352)
T ss_dssp C---T---HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-----------HHHHHHHHHHHHHHHHHCCSH--------
T ss_pred C---H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----------HHHHHHHHHHHHHHHHHHHHH--------
Confidence 2 0 01122334555666677788888888776655 233333333333333332221
Q ss_pred hcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHH
Q 043156 431 DHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFST 501 (578)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~ 501 (578)
...+..+.....++.|++.+...+...++..+.+|++.||++.|+.+...++++.++|
T Consensus 295 -------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 295 -------------FSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp -------------HHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------------HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 0124456666778899999999999999999999999999999999999999999986
No 45
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.91 E-value=1.1e-22 Score=213.31 Aligned_cols=354 Identities=15% Similarity=0.087 Sum_probs=230.6
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhh
Q 043156 24 GIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVE 103 (578)
Q Consensus 24 ~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~ 103 (578)
+.|..+.+....+....+.....+.+| ++.+++|.|.++.+++.+.+.++..++.++.|+++||+ ||||++.++.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~ 80 (385)
T TIGR00710 3 AKAFALLLGCLSILGPLGIDMYLPAFP-EIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIF 80 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHH
Confidence 445555555555656666555555554 56789999999999999999999999999999999998 9999999998887
Q ss_pred ccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHH
Q 043156 104 FLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAI 183 (578)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~ 183 (578)
.++.++. ...++...+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+...++|..+
T Consensus 81 ~~~~~~~----------~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~ 144 (385)
T TIGR00710 81 ALSSLGL----------ALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE------LSRIYSILMPVLALAPAV 144 (385)
T ss_pred HHHHHHH----------HHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHHHHHH
Confidence 7665443 334677888999999999999999999999999999876 999999999999999999
Q ss_pred HHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhch
Q 043156 184 SVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINM 263 (578)
Q Consensus 184 ~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (578)
+|.+++++.++++|++.|++.++..++..+..++..++.++++++. +. . +
T Consensus 145 g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----------------------~---~--- 194 (385)
T TIGR00710 145 APLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEARI-QI-----------------------S---T--- 194 (385)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccC-CH-----------------------H---H---
Confidence 9999999998889999999887776655554444332211100000 00 0 0
Q ss_pred hhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHH-HHHHHHHHHhhhccchh
Q 043156 264 DKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPI-FCCTIVMTLCLAQLQTF 342 (578)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~ 342 (578)
.+.+.. +..++ ++....... ......++ .+....+.
T Consensus 195 -----------------~~~~~~------------------------~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~ 231 (385)
T TIGR00710 195 -----------------YFETFL------------------------LLLKS-KMFWGYALIYGASFGGFF-AFFSGAPF 231 (385)
T ss_pred -----------------HHHHHH------------------------HHHcC-chhHHHHHHHHHHHHHHH-HHHHcChH
Confidence 000000 00001 111111111 11111111 11111122
Q ss_pred hhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHH
Q 043156 343 SIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFE 422 (578)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~ 422 (578)
+..+..+.+. ...+.+.....+..++..++.+++.||+.+| +.+..+..+..++.+++....
T Consensus 232 ~~~~~~g~~~-------~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 293 (385)
T TIGR00710 232 VYIDIMGVSP-------SVFGLLFALNIIAMIFGGFLNGRFIKKWGAK-----------SLLRMGLILFAVSAVLLEITA 293 (385)
T ss_pred HHHHHcCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----------HHHHHHHHHHHHHHHHHHHHH
Confidence 2222111111 1123445556677888888899988877766 345556666666665554432
Q ss_pred HHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHH
Q 043156 423 VIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTI 502 (578)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~ 502 (578)
.. ...+...++...++.+++.+...+.......+..| +.+|++.++.+.....++.+.+.
T Consensus 294 ~~-------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~ 353 (385)
T TIGR00710 294 IL-------------------GLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGY 353 (385)
T ss_pred Hh-------------------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHH
Confidence 00 01123344445667788888888888888888887 57999999998887765555555
Q ss_pred HHHh
Q 043156 503 LVNI 506 (578)
Q Consensus 503 ~~~~ 506 (578)
+.+.
T Consensus 354 ~~~~ 357 (385)
T TIGR00710 354 LVSL 357 (385)
T ss_pred HHHh
Confidence 5553
No 46
>PRK03699 putative transporter; Provisional
Probab=99.91 E-value=3.9e-22 Score=210.67 Aligned_cols=374 Identities=11% Similarity=0.107 Sum_probs=238.9
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhh
Q 043156 23 GGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSV 102 (578)
Q Consensus 23 ~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~ 102 (578)
+++|..+...+..++........-..++ .+.+++|+|.++.+++.+.+.++..++.+++|+++||+ ||||++.++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMG-PIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHH
Confidence 4567777777777777676655555554 46789999999999999999999999999999999998 999999999888
Q ss_pred hccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHH
Q 043156 103 EFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGA 182 (578)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~ 182 (578)
..++.++. ...++...+++.|+++|++.+...+...+++.|.+|+++ |++.++..+...++|+.
T Consensus 82 ~~i~~~l~----------~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~g~~ 145 (394)
T PRK03699 82 MILAVAGL----------MFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ------RGSRLLFTDSFFSMAGM 145 (394)
T ss_pred HHHHHHHH----------HHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch------HHHHHHHHHHHHHHHHH
Confidence 77665543 334677888999999999999989999999999998876 99999998888999999
Q ss_pred HHHHHHHHhcc-ccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhh
Q 043156 183 ISVTLIVWIQD-NKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEI 261 (578)
Q Consensus 183 ~~p~l~~~l~~-~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (578)
++|.+.+++.. ..+||+.|.+.+++.++..+..+.. +.++.++++ ++ +
T Consensus 146 ~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~~--~~p~~~~~~----------------------~~------~- 194 (394)
T PRK03699 146 IFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLFS--EFPALGKHA----------------------PK------A- 194 (394)
T ss_pred HHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhc--CCccccccC----------------------cc------c-
Confidence 99999888754 5799999998777655544433321 111100000 00 0
Q ss_pred chhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHH-hHHHHHHHHHHHHHhhhccc
Q 043156 262 NMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIIL-GMIPIFCCTIVMTLCLAQLQ 340 (578)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~~~~~~~~~~ 340 (578)
... ..+.+| .+++. ..+..++.....+....+.+
T Consensus 195 --------------~~~---------------------~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~p 229 (394)
T PRK03699 195 --------------DKP---------------------VAKEKW----------GIGVLFLAIAALLYILAQLTFISWVP 229 (394)
T ss_pred --------------cCc---------------------cccccC----------ChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 000111 01111 11111111122222222222
Q ss_pred hhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHH
Q 043156 341 TFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAI 420 (578)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~ 420 (578)
.+. .+..+.+.. ..+.+.....+...+..++.+++.||+.+| +.+..+..+..+++.+...
T Consensus 230 ~~l-~~~~g~s~~-------~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~-----------~~l~~~~~~~~~~~~~~~~ 290 (394)
T PRK03699 230 EYA-QKKFGMSLE-------DAGNLVSNFWMAYMVGMWIFSFIVRFFDLQ-----------RILTVLAGLALVLMYLFVN 290 (394)
T ss_pred HHH-HHHcCCChH-------HhhHHHHHHHHHHHHHHHHHHHHHHHhchh-----------hHHHHHHHHHHHHHHHHHH
Confidence 222 222122211 123344445566778888888888777665 2333333333333333222
Q ss_pred HHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHH
Q 043156 421 FEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFS 500 (578)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg 500 (578)
. .+..++....++.|++.+...+...++..+..|++ ++...+.......+|..++
T Consensus 291 ~------------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~ 345 (394)
T PRK03699 291 T------------------------DDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-SPKLVNFILTCGTIGTMLT 345 (394)
T ss_pred c------------------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHhhhHHHHHH
Confidence 1 12334444556677777777777777777777755 5777888888889999999
Q ss_pred HHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhh
Q 043156 501 TILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFM 552 (578)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 552 (578)
|.+.+.+.+.. +++..|+..+++.+++.+...+.
T Consensus 346 p~~~G~l~~~~------------------g~~~~~~~~~~~~~~~~~~~~~~ 379 (394)
T PRK03699 346 FVVTSPIVAHF------------------GLQAALLTANGLYAVVFVMCILL 379 (394)
T ss_pred HHHHHHHHHHh------------------CchhhhhhhHHHHHHHHHHHHHH
Confidence 99998876311 23456777777776665543333
No 47
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.91 E-value=1.9e-22 Score=215.05 Aligned_cols=167 Identities=17% Similarity=0.192 Sum_probs=142.4
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhh
Q 043156 23 GGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSV 102 (578)
Q Consensus 23 ~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~ 102 (578)
.+++......+..+...+.++.. .++..++++++|+|..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~ 92 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHH
Confidence 34555666666666666666554 4455677899999999999999999999999999999999998 999999999998
Q ss_pred hccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHH
Q 043156 103 EFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGA 182 (578)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~ 182 (578)
.+++.++. ....+...+++.|++.|++.+...+....++.|.+|+++ |+++.+++..+..+|..
T Consensus 93 ~~~~~~~~----------~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~lg~~ 156 (426)
T PRK12307 93 YSVGTGLS----------GLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL------KSKASAFLVSGFGIGNI 156 (426)
T ss_pred HHHHHHHH----------HHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH------hhHhhhHHHHHHhHHHH
Confidence 88665553 445678889999999999999999999999999999886 99999999999999999
Q ss_pred HHHHHHHHhccccCchhHHHHHHHH
Q 043156 183 ISVTLIVWIQDNKGWDRGFGLSSVA 207 (578)
Q Consensus 183 ~~p~l~~~l~~~~g~~~~f~i~~~~ 207 (578)
++|.+.+.+.+.++||+.|++..+.
T Consensus 157 ~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 157 IAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred HHHHHHHHHcccCCHHHHHHHHHHH
Confidence 9999999998889999999885543
No 48
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=2.7e-23 Score=209.35 Aligned_cols=414 Identities=13% Similarity=0.046 Sum_probs=260.9
Q ss_pred cccccccCCchhhHHHHHHHHHHHHHHHHHH---HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch
Q 043156 16 PAVKYKHGGIKTSLLILAAFGFENLATIALG---VNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGR 92 (578)
Q Consensus 16 ~~~~~~~~~~r~~~~l~~~~~~~~~~~~~~~---~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr 92 (578)
|..+..+.+.|--+-++...++...+||.++ ....+++.++.++|.+|.|.+.+.+.+.+.++-.+.|.++||. +.
T Consensus 15 p~~~~~~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-np 93 (448)
T COG2271 15 PASEIDKTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NP 93 (448)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CC
Confidence 3434334455555666677788888888876 3466889999999999999999999999999999999999998 99
Q ss_pred hhhhhhhhhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHH
Q 043156 93 FKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNL 172 (578)
Q Consensus 93 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~ 172 (578)
|+.+-+++++.++..++. .++++...+.+..++.|..+|.-+|.+...++.++|.+| ||+..++
T Consensus 94 r~fm~~gLilsai~nil~----------Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e------RG~~~si 157 (448)
T COG2271 94 RYFMAFGLILSAIVNILF----------GFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE------RGTWWSI 157 (448)
T ss_pred ceeehHHHHHHHHHHHHH----------hhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc------cCceEEE
Confidence 999999998888554443 566788889999999999999999999999999999998 9999999
Q ss_pred HHHHHHHHHHHHHHHH--HHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccC
Q 043156 173 LFLAVCIGGAISVTLI--VWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLE 250 (578)
Q Consensus 173 ~~~~~~lG~~~~p~l~--~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (578)
++.+.|+|+++.|.+. +++..+++||..|++++++.++..+..++..+..|.+... .+..+
T Consensus 158 Wn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GL--P~ie~--------------- 220 (448)
T COG2271 158 WNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGL--PPIEE--------------- 220 (448)
T ss_pred ehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCC--CCHHH---------------
Confidence 9999999999999999 9999888999999999998766555555443332222110 11100
Q ss_pred CCCCchhhhhhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHH
Q 043156 251 LPEDPMELYEINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTI 330 (578)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 330 (578)
..+++.+.++.+ . +.+.. .-|+.+. +.+...|. .+.+....+
T Consensus 221 ~~~d~~e~~~~~-----------~-~~~~l----------------------s~~~i~~-~YVL~Nk~---iW~la~a~v 262 (448)
T COG2271 221 YRGDPLEIYEEE-----------K-ENEGL----------------------TAWQIFV-KYVLKNKL---IWLLALANV 262 (448)
T ss_pred hhcCchhhhhhh-----------c-cCCCc----------------------cHHHHHH-HHHHcChH---HHHHHHHHH
Confidence 000111000000 0 00000 0000000 01111111 112222223
Q ss_pred HHHHhhhccc---hhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHh
Q 043156 331 VMTLCLAQLQ---TFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVG 407 (578)
Q Consensus 331 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG 407 (578)
..|.....+. +.+..+..+.+. ....+.....-.+.+.+.-+.+++.|++.+.+. . ..-.+.
T Consensus 263 fvYivR~gi~dW~p~YL~e~k~~s~-------~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR-~-------p~~~i~ 327 (448)
T COG2271 263 FVYVVRYGINDWGPLYLSEVKGFSL-------VKANWAISLFEVAGLPGTLLAGWLSDKLFKGRR-G-------PMALIF 327 (448)
T ss_pred HHHHHHHHHhhhHHHHHHHhcCCCH-------HHHHHHHHHHHHHhhHHHHHHHHHHHHhccccc-c-------hHHHHH
Confidence 3333322222 344444333332 123333344456777788888999988875421 0 111222
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHH
Q 043156 408 LVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTC 487 (578)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g 487 (578)
++...++++..... .+.+.+.....++.+|+-.-...-..-..+.|.+|++..|++.|
T Consensus 328 ~~~i~~~~~~~w~~----------------------~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~G 385 (448)
T COG2271 328 MLLITASLVLYWLA----------------------PNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATG 385 (448)
T ss_pred HHHHHHHHHHHHcC----------------------CCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhc
Confidence 33333333222221 12244444444455555332222223345669999999999999
Q ss_pred HHHHHHHH-HHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccc
Q 043156 488 FLWCSMAL-GYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRY 556 (578)
Q Consensus 488 ~~~~~~~i-g~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~ 556 (578)
+..++..+ |+.++.+..+.+.+. -+| ...|.++.+.++++.+.++.+.+..
T Consensus 386 f~Glf~Yl~Ga~~a~~~~g~i~d~-------~gW-----------~g~Fi~~~~~a~l~~lll~~~~~~~ 437 (448)
T COG2271 386 FVGLFAYLIGAALAGLPLGYIADT-------WGW-----------DGGFIVLSIAALLAILLLLPVWNAE 437 (448)
T ss_pred hhhhHHHHhhHHhcCCcceeeEec-------CCC-----------cchHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999998 888888777766521 234 4567777777777777776665543
No 49
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.91 E-value=1.5e-22 Score=218.97 Aligned_cols=175 Identities=14% Similarity=0.112 Sum_probs=132.4
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhh
Q 043156 24 GIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVE 103 (578)
Q Consensus 24 ~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~ 103 (578)
+.+.++......+......+...+.+ .++.+++|+|.++.+++.+.+.+++.++.+++|+++||+ |||+++.++.+++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~ 111 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLL-PIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLT 111 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 34444444445555555555544444 467889999999999999999999999999999999998 9999999988887
Q ss_pred ccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHH
Q 043156 104 FLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAI 183 (578)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~ 183 (578)
+++.++. ....+...+++.|+++|++.+...+ ...+++|++|+++ |++++++.+...++|..+
T Consensus 112 ~~~~~~~----------~~~~s~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~~~------rg~a~g~~~~~~~~g~~~ 174 (476)
T PLN00028 112 APAVFCM----------SLVSSATGFIAVRFFIGFSLATFVS-CQYWMSTMFNGKI------VGTANGIAAGWGNLGGGV 174 (476)
T ss_pred HHHHHHH----------HHhcCHHHHHHHHHHHHHHHHhhHH-HHHHHHHhcChhh------eeHHHHHHHHHHHHHHHH
Confidence 7665443 3345777888899999998886543 4567899999886 999999998888888888
Q ss_pred HHHHHHHhc----c-----ccCchhHHHHHHHHHHHHHHHHHh
Q 043156 184 SVTLIVWIQ----D-----NKGWDRGFGLSSVAVFLATIIFAA 217 (578)
Q Consensus 184 ~p~l~~~l~----~-----~~g~~~~f~i~~~~~~~~~~~~~~ 217 (578)
++.+.+.+. + ..|||+.|++.+++.++..+..++
T Consensus 175 ~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 175 TQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred HHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 877665542 1 248999999988876655544443
No 50
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.91 E-value=6.5e-23 Score=220.55 Aligned_cols=374 Identities=15% Similarity=0.052 Sum_probs=225.9
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhHHH
Q 043156 50 VTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALL 129 (578)
Q Consensus 50 ~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (578)
...+.+++|++.++.+++.+.+.+...++.+++|+++||+ |||++++.+.++..++.++. ....+.+.+
T Consensus 42 ~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~----------~~~~~~~~l 110 (455)
T TIGR00892 42 FKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILA----------SFSSNVIEL 110 (455)
T ss_pred HHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHH----------HHhhhHHHH
Confidence 3456789999999999999999999999999999999998 99999999988777554443 334556655
Q ss_pred HH-HHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHHHHHHHH
Q 043156 130 FV-ALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGLSSVAV 208 (578)
Q Consensus 130 ~~-~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i~~~~~ 208 (578)
++ .|++.|++.+...+...+++.++++ ++ |+++.++.+.+.++|..++|.+++++.+.+|||+.|++.+++.
T Consensus 111 ~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~------r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~ 183 (455)
T TIGR00892 111 YLTAGFITGLGLAFNFQPSLTMLGKYFY-RR------RPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLL 183 (455)
T ss_pred HHHHHHHHHhcchhhhhHHHHHHHHHHH-hh------HHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 54 5688899998766666788889886 44 9999999999999999999999999999899999999998876
Q ss_pred HHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhcccCCCCCccchhhHhhh
Q 043156 209 FLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIETEFLPHRDIFRFLDKAAI 288 (578)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (578)
+++.+..++..+..+.++..+ +... ...+.+. ..++.......+.
T Consensus 184 ~~~~v~~~~~~~~~~~~~~~~-~~~~--------------~~~~~~~--------------------~~~~~~~~~~~~~ 228 (455)
T TIGR00892 184 LHCCVCGALMRPVGPSQRVSK-SKSK--------------EGLPPDG--------------------STKKLSKKSTAEK 228 (455)
T ss_pred HHHHHHHHHhCCCCccccccc-cccc--------------ccCCCCC--------------------ccccccccchhhh
Confidence 665554444433211100000 0000 0000000 0000000000000
Q ss_pred hccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccchhhhhhhccCCCCCCCceeeCCCcccCc
Q 043156 289 QKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQTFSIQQGLTMDTSVTTSFHIPPASLPIL 368 (578)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (578)
. .++.. .+... .+.... ...........+....+++..+.. +.+.. ....+.+.+.
T Consensus 229 ~-------------~~~~~--~~~~~-~~~~~~---~~~~~~l~~~~~~~~~~~l~~~~~--~~g~s---~~~~g~~~~~ 284 (455)
T TIGR00892 229 I-------------NRFLD--FSLFT-HRGFLV---YLSGNVIMFLGFFAPIIFLVPYAK--DKGVD---EYEAAFLLSI 284 (455)
T ss_pred h-------------hhhcc--hHHhc-CchHHH---HHHHHHHHHHHccchHHHHHHHHH--HcCCC---HHHHHHHHHH
Confidence 0 00000 00000 111111 111111111221111111111111 11111 1122344555
Q ss_pred hhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchh
Q 043156 369 PILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPIST 448 (578)
Q Consensus 369 ~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (578)
..+..++..|+.+++.|+...|. .....+..+.++.+++++.+... .+.
T Consensus 285 ~~~~~~~~~~~~g~l~d~~~~~~-------~~~~~~~~~~~~~~l~~ll~~~~------------------------~~~ 333 (455)
T TIGR00892 285 IGFVDIFARPSCGLIAGLKWIRP-------HVQYLFSFALLFNGLTHLLCALA------------------------GDY 333 (455)
T ss_pred HHHHHHHHHHHHHHHhcccccCH-------HHHHHHHHHHHHHHHHHHHHHHh------------------------chH
Confidence 66777777888888876522110 11112233334334443333221 144
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCc
Q 043156 449 FWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINR 528 (578)
Q Consensus 449 ~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (578)
+++++..++.|++.+...+...+++.+.+|++.+|++.|+.++..++|+.+|+.+.+.+.+..
T Consensus 334 ~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~----------------- 396 (455)
T TIGR00892 334 TGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDAT----------------- 396 (455)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhc-----------------
Confidence 556666778888888888888999999999999999999999999999999999988765211
Q ss_pred chhHHHHHHHHHHHHHHHHH
Q 043156 529 NHLNLFFWLLSALSFINFSV 548 (578)
Q Consensus 529 ~~~~~~f~~~~~~~~i~~i~ 548 (578)
++|+..|++.+++.+++.+.
T Consensus 397 g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 397 KNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred CCcchHHHHhhHHHHHHHHH
Confidence 23556777777777666553
No 51
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.90 E-value=4.7e-22 Score=209.05 Aligned_cols=364 Identities=11% Similarity=0.051 Sum_probs=235.1
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhh
Q 043156 24 GIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVE 103 (578)
Q Consensus 24 ~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~ 103 (578)
+.|.++.++...++..++...+.+.+|.|.+ ++|.|..++|++.+.+.++..++.++.|+++||+ ||||++.++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~ 81 (381)
T PRK03633 4 YTRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIF 81 (381)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHH
Confidence 4566888899999999998888888988875 7899999999999999999999999999999998 9999999998888
Q ss_pred ccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHH
Q 043156 104 FLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAI 183 (578)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~ 183 (578)
.++.++. ...++.+.+++.|++.|++.+...|...+.+.|..++++ |++.+++++.+.++|..+
T Consensus 82 ~~~~~~~----------~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~ 145 (381)
T PRK03633 82 AAGCAGL----------GLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN------RGRLLAAYMMVYYLGTVL 145 (381)
T ss_pred HHHHHHH----------HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHHH
Confidence 8665443 345678889999999999999888887777788888765 999999999999999999
Q ss_pred HHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhch
Q 043156 184 SVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINM 263 (578)
Q Consensus 184 ~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (578)
||.+++++.+...+...+. .+......... .+.+ .+++++++ + +
T Consensus 146 g~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~-~~~~--~~~~~~~~-~-----------------------~-------- 189 (381)
T PRK03633 146 GQLLVSKVSTELMSVLPWV-TGLVLAAILPL-LFTR--ILNQQAEN-H-----------------------D-------- 189 (381)
T ss_pred HHHHHhcccccccchHHHH-HHHHHHHHHHH-HHhc--ccCCCCCC-C-----------------------C--------
Confidence 9999999877543333332 22221111111 1111 00000000 0 0
Q ss_pred hhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHH-HHHHHHHHHHHhhhccchh
Q 043156 264 DKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMI-PIFCCTIVMTLCLAQLQTF 342 (578)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~ 342 (578)
. .++. +..+++ ...... ..+.....+...+...+ .
T Consensus 190 ------------~---~~~~---------------------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~lp-~ 225 (381)
T PRK03633 190 ------------S---TSIW---------------------------PMLKLR-QARLGVNGCIISGIVLGSLYGLMP-L 225 (381)
T ss_pred ------------C---CCHH---------------------------HHHHhc-chHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 0 0000 000011 111110 01111111111222122 2
Q ss_pred hhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHH
Q 043156 343 SIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFE 422 (578)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~ 422 (578)
+..+ ...+. ...+.+.....+..++...+.+++.||+.+| +.+..+..+..++.+.... .
T Consensus 226 ~~~~-~g~s~-------~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~-----------~~l~~~~~~~~~~~~~~~~-~ 285 (381)
T PRK03633 226 YLNH-QGMSD-------ASIGFWMALLVSAGILGQWPIGRLADRFGRL-----------LVLRVQVFVVILGSIAMLS-Q 285 (381)
T ss_pred HHHH-cCCCH-------HHHHHHHHHHHHHHHHHHhhhHHHHHHcCcH-----------HHHHHHHHHHHHHHHHHhh-h
Confidence 2211 11111 1123344455666777778888888877766 3455566665555433211 1
Q ss_pred HHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHH
Q 043156 423 VIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTI 502 (578)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~ 502 (578)
. ......++.+++.....|...+.+.+..|++.++.+.+..++..++|+.+||.
T Consensus 286 ------------------------~--~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~ 339 (381)
T PRK03633 286 ------------------------A--AMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPS 339 (381)
T ss_pred ------------------------H--HHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11223455666666778989999999999999898899999999999999999
Q ss_pred HHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 043156 503 LVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVY 549 (578)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~ 549 (578)
+.+.+.+. .++++.|...+.+.++..+..
T Consensus 340 ~~G~l~~~------------------~g~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 340 FTAMLMQN------------------YSDNLLFIMIASVSFIYLLML 368 (381)
T ss_pred HHHHHHHH------------------hCccHHHHHHHHHHHHHHHHH
Confidence 99987631 123456777766666554333
No 52
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.90 E-value=6.6e-22 Score=208.77 Aligned_cols=348 Identities=15% Similarity=0.071 Sum_probs=219.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
|..+.+....++..++-..+...++. +.+++|.+..+.+++.+.+.+.+.++.+++|+++||+ ||||+++++.+++.+
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~ 80 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIA-LLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLL 80 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHH
Confidence 45666777788877765555444444 4679999999999999999999999999999999998 999999999998876
Q ss_pred CCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHH
Q 043156 106 PPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISV 185 (578)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p 185 (578)
+.+++ ....+ .++.|+++|++.+...|+..+++.|++|+++ |+++.++.....++|..+||
T Consensus 81 ~~~~~----------~~~~~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~------~~~a~~~~~~~~~~~~~~Gp 141 (393)
T PRK11195 81 GCLLM----------LFGIH---PLLAYGLVGIGAAAYSPAKYGILTELLPGEK------LVKANGWMEGSTIAAILLGT 141 (393)
T ss_pred HHHHH----------HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 54432 11222 2678999999999999999999999999876 99999999999999999999
Q ss_pred HHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhh
Q 043156 186 TLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDK 265 (578)
Q Consensus 186 ~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (578)
.++|++.+. .|+..+++.+.+.+++.+.... .++.+.+++.. ++++....+
T Consensus 142 ~lgG~l~~~-~~~~~~~i~~~~~~~~~~~~~~-l~~~~~~~~~~----------------------~~~~~~~~~----- 192 (393)
T PRK11195 142 VLGGALADP-HAEAALAVCALIYLLAALFNLF-IPRLGARRPGQ----------------------SWNPIALLR----- 192 (393)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhc-CCCCccccccc----------------------CCCHHHHHH-----
Confidence 999999874 4777777666554444333322 22211111100 000000000
Q ss_pred hhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhcc---chh
Q 043156 266 EAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQL---QTF 342 (578)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~---~~~ 342 (578)
++.+..+ .+...+........ ...++...... ...
T Consensus 193 ---------------~~~~~~~------------------------~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 230 (393)
T PRK11195 193 ---------------DFFHACR------------------------VLWRDKLGRFSLAG---TTLFWGAGATLRFLVLA 230 (393)
T ss_pred ---------------HHHHHHH------------------------HHHhCchhHHHHHH---HHHHHHHHHHHHHHHHH
Confidence 0000000 00000111011101 11111111111 112
Q ss_pred hhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHH
Q 043156 343 SIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFE 422 (578)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~ 422 (578)
+.++..+.+. ...+.+.....++.++..++.+++.++..+| +.+..|+ ++++..+.....
T Consensus 231 ~~~~~lg~s~-------~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~-----------~~~~~g~-~~~~~~~~~~~~- 290 (393)
T PRK11195 231 WAPVALGITL-------NQPAYLQAVVAIGIAVGAGAAARLVTLETVL-----------RVLPAGI-LMGLVVLLMALQ- 290 (393)
T ss_pred HHHHHcCCCh-------hHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-----------chHHHHH-HHHHHHHHHHHH-
Confidence 2222222111 1234455556677777777777776543322 2344453 333333333221
Q ss_pred HHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchh-hHHHHHHHHHHHHHHHHHHH
Q 043156 423 VIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGI-KSLSTCFLWCSMALGYFFST 501 (578)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~-rg~~~g~~~~~~~ig~~lg~ 501 (578)
.+.++.+...++.|++.++..++.++...+..|++. +|++.++.++.++++..++.
T Consensus 291 -----------------------~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~ 347 (393)
T PRK11195 291 -----------------------HSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLML 347 (393)
T ss_pred -----------------------hHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHH
Confidence 144555666778889888888888888888777765 79999999999999999999
Q ss_pred HHHHhhh
Q 043156 502 ILVNIVN 508 (578)
Q Consensus 502 ~~~~~~~ 508 (578)
.+.+.+.
T Consensus 348 ~~~~~~~ 354 (393)
T PRK11195 348 GLYSLLV 354 (393)
T ss_pred HHHHHHH
Confidence 8888664
No 53
>TIGR00895 2A0115 benzoate transport.
Probab=99.90 E-value=4.4e-22 Score=209.28 Aligned_cols=379 Identities=15% Similarity=0.095 Sum_probs=229.1
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhh
Q 043156 24 GIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVE 103 (578)
Q Consensus 24 ~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~ 103 (578)
+++......+..+........ ..+...++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~ 92 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAA-MGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLF 92 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHH
Confidence 344444444455555444443 34445567788999999999999999999999999999999998 9999999998877
Q ss_pred ccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHH
Q 043156 104 FLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAI 183 (578)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~ 183 (578)
.++.++. ....+...+++.|++.|++.+...+...+++.|.+|+++ |++++++++.+.++|..+
T Consensus 93 ~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~ 156 (398)
T TIGR00895 93 SVFTLLC----------ALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF------RGTAVGLMFCGYPIGAAV 156 (398)
T ss_pred HHHHHHH----------HHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh------hchhHhhHhhHHHHHHHH
Confidence 7554443 334677788899999999999999999999999999876 999999999999999999
Q ss_pred HHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceec-CCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhc
Q 043156 184 SVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQ-VVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEIN 262 (578)
Q Consensus 184 ~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (578)
+|.+++++.+..||++.|++.++...+..+..+...++.++. .+++++...+. ...... +... +
T Consensus 157 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~--~--------- 221 (398)
T TIGR00895 157 GGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRI---VNAIAP-QMQA--E--------- 221 (398)
T ss_pred HHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHH---HHHHHH-hccc--c---------
Confidence 999999999989999999988655444443333333221110 00000000000 000000 0000 0
Q ss_pred hhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhh--hHHHHHh-HHHHHHHHHHHHHhhhcc
Q 043156 263 MDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVE--NAKIILG-MIPIFCCTIVMTLCLAQL 339 (578)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~k~~~~-~~~~~~~~~~~~~~~~~~ 339 (578)
.....++.+.. ...++...+...+ ..+.... .+...+....++......
T Consensus 222 -------~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (398)
T TIGR00895 222 -------AQSALPEQKAT---------------------QGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWL 273 (398)
T ss_pred -------ccccccccccc---------------------cchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000000 0000000000000 0111111 111111111111111111
Q ss_pred chhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHH
Q 043156 340 QTFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAA 419 (578)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~ 419 (578)
+.+... .+.+ ....+.+.....+..++..++.+++.||+.+| ++..+..+.++....+.
T Consensus 274 -~~~~~~-~g~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------------~~~~~~~~~~~~~~~~~ 332 (398)
T TIGR00895 274 -PKLMVE-LGFS-------LSLAATGGALFNFGGVIGSIIFGWLADRLGPR------------VTALLLLLGAVFAVLVG 332 (398)
T ss_pred -HHHHHH-cCCC-------HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH------------HHHHHHHHHHHHHHHHH
Confidence 111111 1111 11123444555677788888888888776554 23333333333332222
Q ss_pred HHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHH
Q 043156 420 IFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFF 499 (578)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~l 499 (578)
... .+.+......++.+++.+...+..+++..+.+|++.||++.|+.+....+|..+
T Consensus 333 ~~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 389 (398)
T TIGR00895 333 STL-----------------------FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAII 389 (398)
T ss_pred HHh-----------------------hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 211 133344556677888888889999999999999999999999999999999999
Q ss_pred HHHHHHhh
Q 043156 500 STILVNIV 507 (578)
Q Consensus 500 g~~~~~~~ 507 (578)
++.+.+.+
T Consensus 390 g~~~~G~l 397 (398)
T TIGR00895 390 GPILAGYL 397 (398)
T ss_pred HHHhHHhc
Confidence 99988753
No 54
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.90 E-value=7.2e-22 Score=208.55 Aligned_cols=376 Identities=13% Similarity=0.023 Sum_probs=222.8
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HHHHHHhHHHHHhhhccchhhhhh-hh
Q 043156 22 HGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMG-TSYILSIVVALLADAFIGRFKAVL-IS 99 (578)
Q Consensus 22 ~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~-~~~~~~~~~G~laD~~~Grr~~~~-~~ 99 (578)
+...+..+..++..++..++...+.+.++.|+.+++|+|.++.|++.+...+ +..+.++++|+ +||+ ||||.++ .+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~ 88 (393)
T PRK15011 11 KSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFC 88 (393)
T ss_pred hhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHH
Confidence 3445566777778899999988889999999999999999999999877655 55555555666 9998 9998765 44
Q ss_pred hhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhh--hHHHHHHHHH
Q 043156 100 GSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMS--SFFNLLFLAV 177 (578)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~--~~~~~~~~~~ 177 (578)
.++.+++..+. ....+.+.+++.+.+.+...+...|...++..|+.++++ |. ...++.+.+.
T Consensus 89 ~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 152 (393)
T PRK15011 89 CLLGVLACTLF----------AWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTG------REAVMFSSFLRAQV 152 (393)
T ss_pred HHHHHHHHHHH----------HHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhcc------chHHHHHHHHHHHH
Confidence 44433332221 334556655544444343344567777788888776554 43 3447888899
Q ss_pred HHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchh
Q 043156 178 CIGGAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPME 257 (578)
Q Consensus 178 ~lG~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (578)
++|..++|.+++++.+++|||..|++.++..++..+..+...++.+.+++.. +.
T Consensus 153 ~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~- 206 (393)
T PRK15011 153 SLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLA-------------------------TG- 206 (393)
T ss_pred HHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCccc-------------------------cc-
Confidence 9999999999999998899999999888766655544443333211111000 00
Q ss_pred hhhhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhh
Q 043156 258 LYEINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLA 337 (578)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~ 337 (578)
+ . + . . .++++...............+..+.
T Consensus 207 --~-------------~---~------------------------~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (393)
T PRK15011 207 --T-------------L---E------------------------A-P-------RRNRRDTLLLFVICTLMWGTNSLYI 236 (393)
T ss_pred --c-------------c---c------------------------c-c-------ccccccHHHHHHHHHHHHHHHHHHH
Confidence 0 0 0 0 0 0001111111111011111111111
Q ss_pred ccchhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHH
Q 043156 338 QLQTFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAI 417 (578)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~ 417 (578)
...+.+.++..+.+.. ..+.+.....+..++..++.+++.||+++| +.+..+.+...+.+..
T Consensus 237 ~~~p~~l~~~~~~~~~-------~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~-----------~~~~~~~~~~~~~~~~ 298 (393)
T PRK15011 237 INMPLFIINELHLPEK-------LAGVMMGTAAGLEIPTMLIAGYFAKRLGKR-----------FLMRVAAVAGVCFYAG 298 (393)
T ss_pred HHHHHHHHHHcCCCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----------HHHHHHHHHHHHHHHH
Confidence 1122222222122211 122233333445556678889998888776 2344444444333322
Q ss_pred HHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHH
Q 043156 418 AAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGY 497 (578)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~ 497 (578)
+.... +.+++....++.+++.+...+....+..+.+|++ ||+++++.+...++|.
T Consensus 299 ~~~~~------------------------~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~ 353 (393)
T PRK15011 299 MLMAH------------------------SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ-AGSATTLYTNTSRVGW 353 (393)
T ss_pred HHHHh------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-cchHHHHHHHHHHHHH
Confidence 22211 2333333444455555555555556667888865 9999999999999999
Q ss_pred HHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhh
Q 043156 498 FFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFM 552 (578)
Q Consensus 498 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 552 (578)
.+++.+.+.+.+ ..+|+..|+..+++.+++++++++.
T Consensus 354 ~~g~~l~G~i~~------------------~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 354 IIAGSLAGIVAE------------------IWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHH------------------HhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 999999998762 1246677888788888877777654
No 55
>TIGR00898 2A0119 cation transport protein.
Probab=99.90 E-value=3.4e-22 Score=218.06 Aligned_cols=389 Identities=14% Similarity=0.115 Sum_probs=234.1
Q ss_pred HHHHHhcCCC---HHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhH
Q 043156 51 TYFNGVLHLD---LAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAA 127 (578)
Q Consensus 51 ~yl~~~lg~s---~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (578)
..+.+++|++ ..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++. ...+++.
T Consensus 113 ~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~----------~~~~~~~ 181 (505)
T TIGR00898 113 STIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLT----------AFSPNYT 181 (505)
T ss_pred ccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHH----------HHcccHH
Confidence 3467889999 89999999999999999999999999998 99999999988888665553 4457888
Q ss_pred HHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHHHHHHH
Q 043156 128 LLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGLSSVA 207 (578)
Q Consensus 128 ~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i~~~~ 207 (578)
.+++.|++.|++.+...+...+++.|++|+++ |++..+++..+..+|.+++|.++..+.+ ||+.|++.++.
T Consensus 182 ~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~ 252 (505)
T TIGR00898 182 VFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLP 252 (505)
T ss_pred HHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHH
Confidence 99999999999999999999999999999987 9999999999999999999988876653 99999998887
Q ss_pred HHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhcccCCCCCccchhhHhh
Q 043156 208 VFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIETEFLPHRDIFRFLDKAA 287 (578)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (578)
.++..+..++..+..+....+ ....+..+.+....+......+ .+..+.. .+..
T Consensus 253 ~~~~~~~~~~~~esp~~l~~~--~~~~~a~~~l~~~~~~~~~~~~---~~~~~~~--------------------~~~~- 306 (505)
T TIGR00898 253 TFLFFLLSWFVPESPRWLISQ--GRIEEALKILQRIAKINGKKLP---AEVLSLS--------------------LEKD- 306 (505)
T ss_pred HHHHHHHHHhcCCChHHHHHC--CCHHHHHHHHHHHHHHcCCCCC---HHHHhhh--------------------hhhh-
Confidence 666655544332211100001 1111222222211111110000 0000000 0000
Q ss_pred hhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccchhhhhhhccCCCCCCCceeeCCCcccC
Q 043156 288 IQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQTFSIQQGLTMDTSVTTSFHIPPASLPI 367 (578)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (578)
... . .....++ +-.+++ +..... ......|............ ..+ .++ ........
T Consensus 307 -~~~-~------~~~~~~~----~l~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~-~~~----~~~~~~~~ 362 (505)
T TIGR00898 307 -LSS-S------KKQYSFL----DLFRTP-NLRKTT---LCLMMLWFTTAFSYYGLVL---DLG-NLG----GNIYLDLF 362 (505)
T ss_pred -hhh-c------cCCCcHH----HHhCCh-HHHHHH---HHHHHHHHHHHHHHHHHhc---ccc-ccC----CChHHHHH
Confidence 000 0 0000010 000011 111110 0111111111100000000 101 111 11111222
Q ss_pred chhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccch
Q 043156 368 LPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPIS 447 (578)
Q Consensus 368 ~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (578)
...+..+....+.+.+.||++|| +.+.+++++.+++++.+.+.. ...
T Consensus 363 ~~~~~~i~~~~~~~~l~dr~grr-----------~~~~~~~~~~~~~~l~~~~~~----------------------~~~ 409 (505)
T TIGR00898 363 ISGLVELPAKLITLLLIDRLGRR-----------YTMAASLLLAGVALLLLLFVP----------------------VDL 409 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCH-----------HHHHHHHHHHHHHHHHHHHcC----------------------CCc
Confidence 33444555666677788877776 456667777777766555532 112
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCC
Q 043156 448 TFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNIN 527 (578)
Q Consensus 448 ~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (578)
.++.+...++.+++.....+..+.+..|.+|++.|++++|+.+....+|+.++|.+.+ +..
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~------------------ 470 (505)
T TIGR00898 410 YFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE------------------ 470 (505)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH------------------
Confidence 2333444455566666777888899999999999999999999999999999998887 321
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhccccccccccc
Q 043156 528 RNHLNLFFWLLSALSFINFSVYLFMSSRYNYRPQTS 563 (578)
Q Consensus 528 ~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~ 563 (578)
.+....+++.+++++++.++.+++ ++.++++.++
T Consensus 471 -~~~~~~~~~~~~~~~~~~~~~~~l-pet~~~~l~~ 504 (505)
T TIGR00898 471 -KWLFLPLVLFGGLALLAGILTLFL-PETKGVPLPE 504 (505)
T ss_pred -HHHhhHHHHHHHHHHHHHHHHHcC-cCCCCCCCCC
Confidence 112245777777777776665543 5555554443
No 56
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.90 E-value=3.5e-22 Score=217.47 Aligned_cols=170 Identities=16% Similarity=0.204 Sum_probs=145.0
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhh
Q 043156 22 HGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGS 101 (578)
Q Consensus 22 ~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 101 (578)
+.+++.+..+.+..++..+.+......+ .++.+++|+|..+.+++.+.+.++..++.++.|+++||+ |||+++.++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 93 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVL-TEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 4566777777777777777766555444 567789999999999999999999999999999999998 99999999988
Q ss_pred hhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHH
Q 043156 102 VEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGG 181 (578)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~ 181 (578)
+.+++.++. ....+...+++.|++.|++.+...+...+++.|.+|+++ |++++++++.+.++|.
T Consensus 94 ~~~~~~~~~----------~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~ 157 (496)
T PRK03893 94 LFSVGTLAC----------GFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL------RNKASGFLISGFSIGA 157 (496)
T ss_pred HHHHHHHHH----------HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHH
Confidence 887665553 345678889999999999999999999999999999876 9999999999999999
Q ss_pred HHHHHHHHHhccccCchhHHHHHHHHHH
Q 043156 182 AISVTLIVWIQDNKGWDRGFGLSSVAVF 209 (578)
Q Consensus 182 ~~~p~l~~~l~~~~g~~~~f~i~~~~~~ 209 (578)
.++|.+.+++.++++||+.|++.++..+
T Consensus 158 ~~~~~~~~~l~~~~~w~~~f~~~~~~~~ 185 (496)
T PRK03893 158 VVAAQVYSLVVPVWGWRALFFIGILPII 185 (496)
T ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence 9999999999999999999987544433
No 57
>PRK11043 putative transporter; Provisional
Probab=99.90 E-value=9.8e-22 Score=208.02 Aligned_cols=163 Identities=17% Similarity=0.225 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHHHH--HHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCC
Q 043156 38 ENLATIALGVNLVTY--FNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPT 115 (578)
Q Consensus 38 ~~~~~~~~~~~l~~y--l~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~ 115 (578)
....++....+.|.+ +++++|.+.++.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++.
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~----- 88 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGM----- 88 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHH-----
Confidence 333444444444443 6789999999999999999999999999999999998 99999999988777554443
Q ss_pred CCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 043156 116 AGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNK 195 (578)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~ 195 (578)
....+...+++.|+++|++.+...+...+++.|.+|+++ |.+.++......++|..++|.+++++.+++
T Consensus 89 -----~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~ 157 (401)
T PRK11043 89 -----LWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------ANRVFATIMPLVALSPALAPLLGAWLLNHF 157 (401)
T ss_pred -----HHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 334677888999999999988877777889999999875 888888888889999999999999999989
Q ss_pred CchhHHHHHHHHHHHHHHHHHh
Q 043156 196 GWDRGFGLSSVAVFLATIIFAA 217 (578)
Q Consensus 196 g~~~~f~i~~~~~~~~~~~~~~ 217 (578)
||++.|++.++..++..+..+.
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 158 GWQAIFATLFAITLLLILPTLR 179 (401)
T ss_pred ChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999887776665544443
No 58
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.90 E-value=3.9e-21 Score=203.58 Aligned_cols=390 Identities=14% Similarity=-0.003 Sum_probs=241.3
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhh
Q 043156 22 HGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGS 101 (578)
Q Consensus 22 ~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 101 (578)
-..||.+....+..+....+.+...++++.++ +++|+|.++.+++.+.+.++..++.++.|+++||+ ||||++..+.+
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~ 86 (402)
T TIGR00897 9 IGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLL 86 (402)
T ss_pred cCCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHH
Confidence 35678888888888888888888888888888 67899999999999999999999999999999998 99999999988
Q ss_pred hhccCCcccccCCCCCccccc-cchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHH
Q 043156 102 VEFLPPPCNVFDPTAGCKKIE-GSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIG 180 (578)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG 180 (578)
+..++.++. ..... ..+...+++.|++.|+|.+...+...+.+.+.+|+++ |++++++++.+.++|
T Consensus 87 ~~~~~~~~~-------~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g 153 (402)
T TIGR00897 87 LWCVGHAAF-------IVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN------LSSAVGWFWAVYSIG 153 (402)
T ss_pred HHHHHHHHH-------HHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH------HHHHHHHHHHHHHHH
Confidence 887554321 00011 2466777889999999988877777788889998876 999999999999999
Q ss_pred H-HHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhh
Q 043156 181 G-AISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELY 259 (578)
Q Consensus 181 ~-~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (578)
. .++|.+++++.+.+||+..++.......++.+..++..++.+ +|++ . +.+++ .
T Consensus 154 ~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------------------~~~~~----~ 208 (402)
T TIGR00897 154 IGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIF--TPQH-M------------------QTREK----F 208 (402)
T ss_pred HHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCC--Cccc-c------------------cCCcc----h
Confidence 6 689999999988888776665544333333332222222110 1110 0 00000 0
Q ss_pred hhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhcc
Q 043156 260 EINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQL 339 (578)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 339 (578)
+ +..+ .++ .-.++++........++....++......
T Consensus 209 ~--------------------~~~~-------------------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (402)
T TIGR00897 209 S--------------------ELGK-------------------AAT----ILFTNPNVLLGGMVRIINTIGLFGFAVFL 245 (402)
T ss_pred h--------------------hHHH-------------------HHH----HHHcChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 000 00011111111111112222222222222
Q ss_pred chhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHH
Q 043156 340 QTFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAA 419 (578)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~ 419 (578)
+ .+.++ .+.+.. ..+.+.....+..++..++.+++.||+.+|+ .....+.+...++.+.+.
T Consensus 246 p-~~~~~-~g~s~~-------~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~----------~~~~~~~l~~~~~~~~l~ 306 (402)
T TIGR00897 246 P-MFVAE-LGFSTS-------EWLQIWGTFFFTNIVFNVIFGIVGDKLGWMN----------TVRWFGGVGCGIFTLALY 306 (402)
T ss_pred H-HHHHH-cCCChh-------HHHHHHHHHHHHHHHHHHHHHHHHHhhcchh----------HHHHHHHHHHHHHHHHHH
Confidence 2 22222 122211 1223334456777888889999998877662 111222223333322222
Q ss_pred HHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHH
Q 043156 420 IFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFF 499 (578)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~l 499 (578)
.... ....+.+...+..++.+++.....+. .....+..| +.||++.|+.++...+++.+
T Consensus 307 ~~~~-------------------~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~ 365 (402)
T TIGR00897 307 YIPQ-------------------HFGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFL 365 (402)
T ss_pred HHHH-------------------ccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHH
Confidence 2110 00113344455566777776665443 344445544 58999999999999999999
Q ss_pred HHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhh
Q 043156 500 STILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFM 552 (578)
Q Consensus 500 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 552 (578)
+|.+.+.+.+. .++...|+..+++.+++.+...++
T Consensus 366 gp~i~g~l~~~------------------~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 366 APAIAVLFIGF------------------FGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHhh------------------cchHHHHHHHHHHHHHHHHHHHHh
Confidence 99999887631 234567888888888877776664
No 59
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.89 E-value=3.3e-22 Score=213.04 Aligned_cols=393 Identities=9% Similarity=-0.014 Sum_probs=236.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
+..|.+....++..+++....++++.|+++++|+|..+.|.+.+.+.++..+++++.|+++||+ ||||++.++..+...
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLV 88 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence 4667777788888888888899999999999999999999999999999999999999999998 999999886655442
Q ss_pred CCcccccCCCCCccccccchhH-HHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHH
Q 043156 106 PPPCNVFDPTAGCKKIEGSDAA-LLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAIS 184 (578)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~ 184 (578)
+.... .......... ....+..+.++..+...+.....+.++.+... ++|+..++..+...++|..++
T Consensus 89 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~g~~~~~~~~g~~i~ 157 (420)
T PRK09528 89 LFGPF-------FIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVS----RRSGFEYGRARMWGSLGWALC 157 (420)
T ss_pred HHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHH----hhccccchhhHHhhhHHHHHH
Confidence 21110 0000000000 01122222233333333333333444432111 236778888888899999999
Q ss_pred HHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchh
Q 043156 185 VTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMD 264 (578)
Q Consensus 185 p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (578)
|.+++++.+ .+|+++|++.+++.+++.+..+...++.++++..+ + + + +.
T Consensus 158 ~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~--~-~----~~--- 206 (420)
T PRK09528 158 AFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVA--------------------N--A-L----GA--- 206 (420)
T ss_pred HHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccchhhhc--------------------c--c-h----hc---
Confidence 999999976 48999999888776665555444332211100000 0 0 0 00
Q ss_pred hhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhh-hccchhh
Q 043156 265 KEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCL-AQLQTFS 343 (578)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~-~~~~~~~ 343 (578)
..+....-+... ..+ .+.+.......+.....+... .+.+.++
T Consensus 207 -----------~~~~~~~~~~~~------------------------~l~-~~~~~~l~l~~~~~~~~~~~~~~~~~~~~ 250 (420)
T PRK09528 207 -----------NASAVSLKDALA------------------------LLK-LPKFWFLVLYVIGVACFYDVFDQQFPNFF 250 (420)
T ss_pred -----------ccccccHHHHHH------------------------Hcc-CCCeEeehHHHHHHHHHHHHHHHHHHHHH
Confidence 000000000000 000 011111111111111222222 2222332
Q ss_pred hhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHH
Q 043156 344 IQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEV 423 (578)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~ 423 (578)
.+... +...+ ....+.+.+++.+...+..++.+++.||+++| +.+.++.++.+++++..++..
T Consensus 251 ~~~~~--~~~~~---~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~-----------~~~~~~~~l~~~~~~l~~~~~- 313 (420)
T PRK09528 251 ASFFA--TPEQG---TRVFGYLNSFQVFLEALIMFFAPFIINRIGAK-----------NALLLAGTIMAVRIIGSGFAT- 313 (420)
T ss_pred HHHHh--ccCcc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-----------hhhHHHHHHHHHHHHHHHhcc-
Confidence 22211 11111 01123445555666778888999999888877 346666777777766665532
Q ss_pred HHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHH-HHHHHHHHHHHHHH
Q 043156 424 IRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCF-LWCSMALGYFFSTI 502 (578)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~-~~~~~~ig~~lg~~ 502 (578)
++++++...++.+++.....+....++.+..|++.+++..+. +++...+|+.+++.
T Consensus 314 -----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~ 370 (420)
T PRK09528 314 -----------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLST 370 (420)
T ss_pred -----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHH
Confidence 455666667778888877777778888899999999988665 67888999999999
Q ss_pred HHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhccc
Q 043156 503 LVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSR 555 (578)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~ 555 (578)
+.+.+.+. .+|+..|...+++.++..++.++..++
T Consensus 371 ~~G~l~~~------------------~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 371 LAGNLYDS------------------IGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHh------------------hCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99887621 235677888888887777666655443
No 60
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.89 E-value=5.3e-24 Score=222.97 Aligned_cols=365 Identities=31% Similarity=0.479 Sum_probs=237.9
Q ss_pred hhhhhhhhhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHH
Q 043156 93 FKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNL 172 (578)
Q Consensus 93 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~ 172 (578)
.|+++++.+++.+|.++++++...... ....+...++++..++++|.|+..|+..++++|++++++. ++|.+++++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~~-~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~---~~~~~~F~~ 76 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPSL-PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDD---SRRDSFFNW 76 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSSC-------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTT---THHHHHHHH
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcchh-hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccch---hhhhhhHHH
Confidence 478888888888887664221111111 1223456789999999999999999999999999998742 469999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceec-CCCCcchHHH-HHHHHHHHHHhcccC
Q 043156 173 LFLAVCIGGAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQ-VVQGSSVLIE-IIQVYVAAIRNRKLE 250 (578)
Q Consensus 173 ~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~ 250 (578)
+|++.|+|+.+++.+.+++.+++||.+.|.++++..+++++.++..++++++. +|.+ +++.+ ...+.....+++...
T Consensus 77 fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 155 (372)
T PF00854_consen 77 FYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGG-SPLTNFIKLVLVAAFKKRKLA 155 (372)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S------S--S--SHHHHHHHHHHHCCC
T ss_pred HHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCC-cccchhHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999998888887 5555 66666 444445555555555
Q ss_pred CCCCchhhhhhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCcc-ccchhhhhHHHHHhHHHHHHHH
Q 043156 251 LPEDPMELYEINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKL-CRVTQVENAKIILGMIPIFCCT 329 (578)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~k~~~~~~~~~~~~ 329 (578)
.+....+..+.....+ ...... ............... ..|.. +..+.+++.|.+.+.++.+...
T Consensus 156 ~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~k~~~~~~~~~~~~ 220 (372)
T PF00854_consen 156 VPKGSSWLDWALFQYS----ERSIFG--IIVFIRAAVIFFPEI---------FFWALFCQVQRVEELKALIRFLPIFLFW 220 (372)
T ss_dssp H-HHHHHHHHHHHHHC----CCCCCC--CCCHHHHHHHHCCCH---------HHHTTTSSTTTHHHCCHHHCHHHCCCHH
T ss_pred cccchHHHHHhhhhhh----hhhhhh--hhhhccchhhhhhhh---------hhcccCCccceeeeeeeeeeccccCeEE
Confidence 4432222222111100 000000 000011000000000 01110 1224456677777777777778
Q ss_pred HHHHHhhhccchhhhhhhccCCCCCCCc-eeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhH
Q 043156 330 IVMTLCLAQLQTFSIQQGLTMDTSVTTS-FHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGL 408 (578)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~ 408 (578)
+.+++++.+.......+...+|..++ + +.+|+.++.++|++.++++.|+.+++.+++.++ +..++.+.++.+|+
T Consensus 221 i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~~----~~~~~~~~k~~~G~ 295 (372)
T PF00854_consen 221 IFYWQMYSQLNTFFLLQVPQMDRGIG-GLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLRR----GIQPSPPQKFGIGM 295 (372)
T ss_dssp HHHHHHCTCCHHHHHHCGGGTTT-SS-------SGGGTTHHHHHCHHHHHHHHHHCCCTTTT----------HHHHHHH-
T ss_pred EEeeehhhhhhhHHHHhccccccccc-cccccccchhhhHHHHHHHHHHHHHHHHHhHHhhh----cccchhhhhhhHHH
Confidence 88888888888888888877877777 5 889999999999999999999999999999984 24568999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHH
Q 043156 409 VLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCF 488 (578)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~ 488 (578)
+++.+++++....+..+....+.+| ..+.+|.+..+++..++|.+..+...+..+|.+|++..+..+|+
T Consensus 296 ~~~~~~~~~~~~v~~~r~~~~~~~~-----------~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~~p~~m~~~ 364 (372)
T PF00854_consen 296 VFAILAMFVAAIVEIRRLCYAQPCG-----------KVSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSRAPSSMMGI 364 (372)
T ss_dssp HHHHHHHHTTTHHHH---HH----T-----------T--THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT-SSSSTHH
T ss_pred HHHHHHHHHHHHHHhhhhhcccccC-----------CCChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHhhhHHHHHH
Confidence 9999999988887764443333333 34447888999999999999999999977777777777777777
Q ss_pred HHHHH
Q 043156 489 LWCSM 493 (578)
Q Consensus 489 ~~~~~ 493 (578)
+....
T Consensus 365 ~~~~~ 369 (372)
T PF00854_consen 365 WFALS 369 (372)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 76554
No 61
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.89 E-value=1.4e-21 Score=206.35 Aligned_cols=384 Identities=10% Similarity=0.002 Sum_probs=235.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccC
Q 043156 28 SLLILAAFGFENLATIALGVNLVTYFNG-VLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLP 106 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~l~~yl~~-~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~ 106 (578)
.+.+....+...+....+.+.+...+.+ ++|+|.+|.+++.+++.+++.++.++.|+++||+ |.||++.++.++..++
T Consensus 35 ~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~i~ 113 (462)
T PRK15034 35 NLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILIIP 113 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHH
Confidence 3334445555556656666666667655 8999999999999999999999999999999998 9999999999988876
Q ss_pred CcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 043156 107 PPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVT 186 (578)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~ 186 (578)
.++..+ ......+++..+++.|++.|++ +..++.....+++++|+++ |+++++++....|+|..+++.
T Consensus 114 ~~~~~~-----a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~------rG~A~Gi~~g~G~~G~~l~~~ 181 (462)
T PRK15034 114 CVWLGI-----AVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK------QGSALGINGGLGNLGVSVMQL 181 (462)
T ss_pred HHHHHH-----HHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH------hHHHHHHHHHHHhhHHHHHHH
Confidence 655300 0000126788999999999998 6678888999999999887 999999997777777776666
Q ss_pred HHHHhc-----c-------------ccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcc
Q 043156 187 LIVWIQ-----D-------------NKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRK 248 (578)
Q Consensus 187 l~~~l~-----~-------------~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (578)
+++.+. . ..+|+.++++..+..++..+..++..++.++ .+ ....+...
T Consensus 182 l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~---~~-~~~~~~~~---------- 247 (462)
T PRK15034 182 VAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS---SR-ASIADQLP---------- 247 (462)
T ss_pred HHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc---cc-cCHHHHHH----------
Confidence 554422 1 2347777777766665555554544332111 11 00000000
Q ss_pred cCCCCCchhhhhhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHH
Q 043156 249 LELPEDPMELYEINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCC 328 (578)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 328 (578)
..++.+..+ ...+..+
T Consensus 248 ---------------------------------------------------------------vlk~~~~Wl-lslly~~ 263 (462)
T PRK15034 248 ---------------------------------------------------------------VLQRLHLWL-LSLLYLA 263 (462)
T ss_pred ---------------------------------------------------------------HhCCCchhH-HHHHHHH
Confidence 001111111 1122222
Q ss_pred HHHHHHhhhccchhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhH
Q 043156 329 TIVMTLCLAQLQTFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGL 408 (578)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~ 408 (578)
....+..+....+++.... .+. ........+-++...+..|+.+++.||+++| +.+.+++
T Consensus 264 tFG~fvg~s~~lp~~~~~~--~~~-------~~~l~~~~l~~l~~~l~rplgG~LADRiG~~-----------~vl~~~~ 323 (462)
T PRK15034 264 TFGSFIGFSAGFAMLAKTQ--FPD-------VNILRLAFFGPFIGAIARSVGGAISDKFGGV-----------RVTLINF 323 (462)
T ss_pred HHHHHHHHHHHHHHHHHHH--cCh-------HHHHHHHHHHHHHHHHHHHhhHHHHHhcCch-----------HHHHHHH
Confidence 2222332322222222111 110 0011112223566788889999999988887 3455566
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCc---------
Q 043156 409 VLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPK--------- 479 (578)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~--------- 479 (578)
+.+.++...+..... .....+.+.....++...++.++.+-...-++.+++|+
T Consensus 324 i~~~i~~~~~~l~lp------------------~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~ 385 (462)
T PRK15034 324 IFMAIFSALLFLTLP------------------GTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMK 385 (462)
T ss_pred HHHHHHHHHHHHHhc------------------cccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhccccc
Confidence 555555433222210 00112344444444444444444444444455556663
Q ss_pred ------------hhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHH
Q 043156 480 ------------GIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFS 547 (578)
Q Consensus 480 ------------~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i 547 (578)
+..|.+.|+......+|+++-|.+.+...+.+ +++...|+.+.+..++|++
T Consensus 386 ~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~-----------------g~~~~~~~~~~~~~~~~~~ 448 (462)
T PRK15034 386 GGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMT-----------------GSPVGAMKVFLIFYIVCVL 448 (462)
T ss_pred ccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHc-----------------CCcHHHHHHHHHHHHHHHH
Confidence 25788899999999999999997777665322 3356779999999999999
Q ss_pred HHhhhccccc
Q 043156 548 VYLFMSSRYN 557 (578)
Q Consensus 548 ~~~~~~~~~~ 557 (578)
+-+..+.|..
T Consensus 449 ~~w~~y~r~~ 458 (462)
T PRK15034 449 LTWLVYGRRK 458 (462)
T ss_pred HHHHHhccCC
Confidence 9988887754
No 62
>PRK15075 citrate-proton symporter; Provisional
Probab=99.89 E-value=3.2e-21 Score=206.37 Aligned_cols=164 Identities=14% Similarity=0.055 Sum_probs=123.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH-HHHHHH-----HHHHHhHHHHHhhhccchhhhhhh
Q 043156 25 IKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQV-TNYMGT-----SYILSIVVALLADAFIGRFKAVLI 98 (578)
Q Consensus 25 ~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~-~~~~~~-----~~~~~~~~G~laD~~~Grr~~~~~ 98 (578)
++....+++..+++.+....+. +..+.+.++++.++.+.+... +...+. ..++.++.|+++||+ ||||+++.
T Consensus 14 ~~~~~~~~~~~~~~~~d~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 91 (434)
T PRK15075 14 ARAILRVTSGNFLEMFDFFLFG-FYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLIV 91 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHHH
Confidence 3456666667777777766544 444578889998887765443 332222 235788999999998 99999999
Q ss_pred hhhhhccCCcccccCCCCCccccccchhH--------HHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHH
Q 043156 99 SGSVEFLPPPCNVFDPTAGCKKIEGSDAA--------LLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFF 170 (578)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~ 170 (578)
+.+++.++.++. ...++.. .++++|+++|++.+...++...+++|++|+++ |++.+
T Consensus 92 ~~~~~~~~~~l~----------~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------rg~~~ 155 (434)
T PRK15075 92 TLSIMASGTLLI----------AFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR------KGFYT 155 (434)
T ss_pred HHHHHHHHHHHH----------HhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc------chHHH
Confidence 999888665554 2233333 46899999999999999988999999999987 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc--------cccCchhHHHHHHH
Q 043156 171 NLLFLAVCIGGAISVTLIVWIQ--------DNKGWDRGFGLSSV 206 (578)
Q Consensus 171 ~~~~~~~~lG~~~~p~l~~~l~--------~~~g~~~~f~i~~~ 206 (578)
+++....++|..+++.+++.+. +.+|||++|++..+
T Consensus 156 ~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 156 SWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 9999888888888888777652 46799999987544
No 63
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.89 E-value=5.2e-22 Score=212.72 Aligned_cols=159 Identities=11% Similarity=0.038 Sum_probs=126.5
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhH
Q 043156 48 NLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAA 127 (578)
Q Consensus 48 ~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (578)
+...++++ +|+|.++.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++... ......+..
T Consensus 48 ~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 119 (438)
T TIGR00712 48 LAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGF------VPWATSSIA 119 (438)
T ss_pred hhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhc------cccccchHH
Confidence 34456665 599999999999999999999999999999998 9999999988887766444210 001124566
Q ss_pred HHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhc-cccCchhHHHHHHH
Q 043156 128 LLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQ-DNKGWDRGFGLSSV 206 (578)
Q Consensus 128 ~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~-~~~g~~~~f~i~~~ 206 (578)
.+++.|++.|++.+...+.....+.|++|+++ |++++++++.+.++|+.++|.+.+.+. .+.+||+.|++.++
T Consensus 120 ~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~ 193 (438)
T TIGR00712 120 IMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAI 193 (438)
T ss_pred HHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 77788999999999988888899999999887 999999999999999999988877544 45689999999888
Q ss_pred HHHHHHHHHHhcCC
Q 043156 207 AVFLATIIFAAGLP 220 (578)
Q Consensus 207 ~~~~~~~~~~~~~~ 220 (578)
..++..+..++..+
T Consensus 194 ~~~i~~~~~~~~~~ 207 (438)
T TIGR00712 194 CAIIVALFAFAMMR 207 (438)
T ss_pred HHHHHHHHHHHhcc
Confidence 76665544444333
No 64
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.88 E-value=8.4e-21 Score=200.39 Aligned_cols=173 Identities=12% Similarity=0.117 Sum_probs=142.7
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhh
Q 043156 23 GGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSV 102 (578)
Q Consensus 23 ~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~ 102 (578)
+.+|..+++.....+..+......+.++ ++.+++|.|..+.+++.+.+.++..++.++.|+++||+ ||||++.++.++
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~-~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~ 82 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIA-DMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSI 82 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHH
Confidence 3566677677777776666665555555 45689999999999999999999999999999999998 999999999888
Q ss_pred hccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHH
Q 043156 103 EFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGA 182 (578)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~ 182 (578)
..++.++. ...++...+++.|++.|++.+...+....+..|.+++++ |+++.++++.+..+|..
T Consensus 83 ~~~~~~~~----------~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 146 (394)
T PRK11652 83 FILGTLVA----------LFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ------LRHANSLLNMGILVSPL 146 (394)
T ss_pred HHHHHHHH----------HHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHH
Confidence 77665443 334677888999999999998877877788889888765 89999999999999999
Q ss_pred HHHHHHHHhccccCchhHHHHHHHHHHHHHH
Q 043156 183 ISVTLIVWIQDNKGWDRGFGLSSVAVFLATI 213 (578)
Q Consensus 183 ~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~ 213 (578)
++|.+++++.+..|||+.|++.++..++..+
T Consensus 147 ~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 177 (394)
T PRK11652 147 LAPLIGGLLTTLFGWRACYLFLLLLGAGVTF 177 (394)
T ss_pred HHHHHHHHHHhccChHHHHHHHHHHHHHHHH
Confidence 9999999998888999999988766554433
No 65
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.88 E-value=1.8e-20 Score=199.37 Aligned_cols=398 Identities=12% Similarity=0.032 Sum_probs=235.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch-hhhhhhhhhhhccCC
Q 043156 29 LLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGR-FKAVLISGSVEFLPP 107 (578)
Q Consensus 29 ~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr-r~~~~~~~~~~~~~~ 107 (578)
..+.+..++...++-...++++.|+++++|++..+.|++.+.+.++..+++++.|+++||+ || |+++.++.++.++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~ 83 (418)
T TIGR00889 5 AKLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLL 83 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHH
Confidence 3456666666667666779999999999999999999999999999999999999999997 66 777777776665443
Q ss_pred cccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccc--------cCCCCCChHHHhhhhhHHHHHHHHHHH
Q 043156 108 PCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGA--------DQFDEKDPIEARQMSSFFNLLFLAVCI 179 (578)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~--------~~~~~~~~~~~~~R~~~~~~~~~~~~l 179 (578)
.+. ....++..+++.|++.+++.+...|...++.. |...... |.+.+| .+
T Consensus 84 ~~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~------~~r~~G------~l 141 (418)
T TIGR00889 84 FFA----------AQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFP------PIRVMG------TI 141 (418)
T ss_pred HHH----------HHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCC------Ceeeeh------hH
Confidence 332 23456777788888888877666665444321 2122111 555554 47
Q ss_pred HHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhh
Q 043156 180 GGAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELY 259 (578)
Q Consensus 180 G~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (578)
|.++||.+++.+.....|. +|++.++..++..+..+ ..++.+++++++ + .+ ..
T Consensus 142 G~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~~-~~~e~~~~~~~~-~---------------------~~---~~ 194 (418)
T TIGR00889 142 GFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFAL-TLPDIPVAKSTA-K---------------------MS---IK 194 (418)
T ss_pred HHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHHh-cCCCCCCCcccc-c---------------------cC---HH
Confidence 8889999998884433343 46666655544443322 222211100000 0 00 00
Q ss_pred hhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhcc
Q 043156 260 EINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQL 339 (578)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 339 (578)
+. ...++ . ...++++-....+..++........ ...
T Consensus 195 ~~----------------~~~~~---~------------------------~~~k~~~~~~~~~~~~~~~~~~~~~-~~~ 230 (418)
T TIGR00889 195 VM----------------LGLDA---F------------------------ILFKNKRMAIFFFFSMLLGAPLQIT-NIF 230 (418)
T ss_pred HH----------------hhhhH---H------------------------HHhcCCCeeeHHHHHHHHHhHHHHH-HHh
Confidence 00 00000 0 0000010000111111111111111 111
Q ss_pred chhhhhhhccCCCCCCCce-eeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHH
Q 043156 340 QTFSIQQGLTMDTSVTTSF-HIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIA 418 (578)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~ 418 (578)
.+.+.... ..+.....++ ....+....+..+..++...+.+++.||+++| +.+.++.++.++++...
T Consensus 231 ~~~~~~~~-g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r-----------~~l~~~~~~~~v~~~l~ 298 (418)
T TIGR00889 231 GNGFLHEF-GRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK-----------KVMLLSLVAWALRFGFF 298 (418)
T ss_pred HHHHHHHh-cccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----------HHHHHHHHHHHHHHHHH
Confidence 11111111 1011000000 01123444555666777778888888888777 45677777777776555
Q ss_pred HHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHH-HHHHHHH
Q 043156 419 AIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLW-CSMALGY 497 (578)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~ig~ 497 (578)
.... ....+.+.+++..++.+++++...+....++.+.+|++.||+++|+.+ ....+|+
T Consensus 299 ~~~~--------------------~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~ 358 (418)
T TIGR00889 299 AYGD--------------------PEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGS 358 (418)
T ss_pred HHcC--------------------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHH
Confidence 4421 001123445556788899998888998899999999999999999997 6788999
Q ss_pred HHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccccccccc
Q 043156 498 FFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYNYRPQTSV 564 (578)
Q Consensus 498 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~ 564 (578)
.+|+.+.|.+.+.+. ..+..+|+..|...+++.+++.+..+++.++..++-+-++
T Consensus 359 ~iGp~l~G~l~~~~g------------~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~~~~~~ 413 (418)
T TIGR00889 359 LLGYILSGVMVEKMF------------AYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNAIKVDD 413 (418)
T ss_pred HHHHHHHHHHHHHhc------------cccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccCCCCcc
Confidence 999999998874220 0011247788999999999888888888876644444333
No 66
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.88 E-value=9.1e-21 Score=198.67 Aligned_cols=157 Identities=16% Similarity=0.156 Sum_probs=134.0
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccc
Q 043156 43 IALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIE 122 (578)
Q Consensus 43 ~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (578)
....+.++.+. +++|+|..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++. ..
T Consensus 8 ~~~~p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~----------~~ 75 (377)
T PRK11102 8 DMYLPALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVAC----------AL 75 (377)
T ss_pred HHHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHH----------HH
Confidence 34456676665 67999999999999999999999999999999998 99999999988887665443 33
Q ss_pred cchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHH
Q 043156 123 GSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGFG 202 (578)
Q Consensus 123 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~ 202 (578)
..+...+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+...++|..++|.+++++.+.++|++.|+
T Consensus 76 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~ 149 (377)
T PRK11102 76 AQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------FSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFW 149 (377)
T ss_pred HccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHH
Confidence 4677788899999999999999999999999999876 9999999999999999999999999998889999999
Q ss_pred HHHHHHHHHHHHHHh
Q 043156 203 LSSVAVFLATIIFAA 217 (578)
Q Consensus 203 i~~~~~~~~~~~~~~ 217 (578)
+.++..++..+...+
T Consensus 150 ~~~~~~~~~~~~~~~ 164 (377)
T PRK11102 150 VLALAAILAAALVFF 164 (377)
T ss_pred HHHHHHHHHHHHHHH
Confidence 887776655544433
No 67
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.88 E-value=2.9e-20 Score=197.51 Aligned_cols=149 Identities=13% Similarity=0.132 Sum_probs=129.6
Q ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhHHHHH
Q 043156 52 YFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFV 131 (578)
Q Consensus 52 yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (578)
.+.+++|.+..+.++..+.+.+++.++.++.|+++||+ ||||+++.+.+++.++.++. ....+...+++
T Consensus 41 ~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~----------~~a~~~~~l~~ 109 (413)
T PRK15403 41 NVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAAT----------LFTTSMTQFLI 109 (413)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHH----------HHcCCHHHHHH
Confidence 36789999999999999999999999999999999998 99999999998888665553 34578888999
Q ss_pred HHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHH
Q 043156 132 ALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGLSSVAVFLA 211 (578)
Q Consensus 132 ~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~ 211 (578)
+|+++|++.+...+....++.|.+|+++ |++.+++.+...++|..+||.+++++.++.|||+.|++.++..+++
T Consensus 110 ~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~ 183 (413)
T PRK15403 110 ARFIQGTSICFIATVGYVTVQEAFGQTK------GIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIA 183 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 9999999988766677788999999876 8999999999999999999999999988889999999988876666
Q ss_pred HHHHHh
Q 043156 212 TIIFAA 217 (578)
Q Consensus 212 ~~~~~~ 217 (578)
.+..++
T Consensus 184 ~~~~~~ 189 (413)
T PRK15403 184 FVGLLL 189 (413)
T ss_pred HHHHHH
Confidence 554333
No 68
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.88 E-value=2.2e-20 Score=197.11 Aligned_cols=171 Identities=15% Similarity=0.091 Sum_probs=140.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCC
Q 043156 28 SLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPP 107 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~ 107 (578)
+-+..+..+....++....+.+| .+.+++|.|..+.+++.+.+.++..++.++.|+++||+ ||||.+.++.++..++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~lp-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~ 82 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLVGLP-RIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIAS 82 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHH
Confidence 34445555556666665555565 45678999999999999999999999999999999998 99999999988887665
Q ss_pred cccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 043156 108 PCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTL 187 (578)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l 187 (578)
++. ...++...+++.|++.|++.+...+...+++.|.+|+++ |+++.++.+...++|..++|.+
T Consensus 83 ~~~----------~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~i~~~~~~~i 146 (392)
T PRK10473 83 LLC----------SLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR------RAKVLSLLNGITCIIPVLAPVL 146 (392)
T ss_pred HHH----------HHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 443 334567778899999999999888888999999999886 9999999999999999999999
Q ss_pred HHHhccccCchhHHHHHHHHHHHHHHHHH
Q 043156 188 IVWIQDNKGWDRGFGLSSVAVFLATIIFA 216 (578)
Q Consensus 188 ~~~l~~~~g~~~~f~i~~~~~~~~~~~~~ 216 (578)
++++.+..+|++.|++.++..++..+...
T Consensus 147 ~~~l~~~~g~~~~~~~~~~~~~i~~~~~~ 175 (392)
T PRK10473 147 GHLIMLKFPWQSLFYTMAAMGILVLLLSL 175 (392)
T ss_pred HHHHHhCcChHHHHHHHHHHHHHHHHHHH
Confidence 99988888999999998877655554433
No 69
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.88 E-value=7.5e-22 Score=205.91 Aligned_cols=155 Identities=9% Similarity=0.008 Sum_probs=132.5
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchh
Q 043156 47 VNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDA 126 (578)
Q Consensus 47 ~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (578)
.....++.+++|+|..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++. ....+.
T Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~----------~~~~~~ 83 (379)
T TIGR00881 15 ALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFF----------GFSTSL 83 (379)
T ss_pred hhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHH----------HHhhhH
Confidence 3344578899999999999999999999999999999999998 99999999998888665553 344678
Q ss_pred HHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHH-HHHHHhccccCchhHHHHHH
Q 043156 127 ALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISV-TLIVWIQDNKGWDRGFGLSS 205 (578)
Q Consensus 127 ~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p-~l~~~l~~~~g~~~~f~i~~ 205 (578)
+.+++.|++.|++.+...+...+++.|++|+++ |++++++.+.+.++|..++| .+++.+.+..+|++.|++.+
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (379)
T TIGR00881 84 WVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPG 157 (379)
T ss_pred HHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHH
Confidence 889999999999999999999999999999876 99999999999999999999 57777777789999999887
Q ss_pred HHHHHHHHHHHhc
Q 043156 206 VAVFLATIIFAAG 218 (578)
Q Consensus 206 ~~~~~~~~~~~~~ 218 (578)
++.++..+..+..
T Consensus 158 ~~~~~~~~~~~~~ 170 (379)
T TIGR00881 158 IIAIIVSLICFLL 170 (379)
T ss_pred HHHHHHHHHHhee
Confidence 7665544444433
No 70
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.87 E-value=2.8e-20 Score=195.66 Aligned_cols=364 Identities=10% Similarity=0.002 Sum_probs=233.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhh----hhhhhhhhh
Q 043156 28 SLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFK----AVLISGSVE 103 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~----~~~~~~~~~ 103 (578)
.+.+.+..+....++....+++|.|+ +++|+|.+++|++.+.+.+...++.++.|.++||+ ||++ .+.++..+.
T Consensus 6 ~~~l~~~~~~~~~~~~~~~p~l~~~l-~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~ 83 (382)
T TIGR00902 6 FRWLALGFFGYFCAYGIFLPFFPAWL-KGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIF 83 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHH
Confidence 34455666666666666778999998 57899999999999999999999999999999998 9843 333333222
Q ss_pred ccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHH
Q 043156 104 FLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAI 183 (578)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~ 183 (578)
.+ .+ + ...++++.+++.|++++.+.+...|...++..|. + + +|++.++......++|.++
T Consensus 84 ~~--~~--------~--~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~-~-~------~~~~~~g~~~~~~slG~~~ 143 (382)
T TIGR00902 84 AA--AF--------S--AGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW-Q-K------QFGLDYGKVRLIGSAAFII 143 (382)
T ss_pred HH--HH--------H--HhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH-H-H------HcCCCccHHHHHHHHHHHH
Confidence 21 01 0 2346788888999999998888888877776543 2 3 3899999999999999999
Q ss_pred HHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhch
Q 043156 184 SVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINM 263 (578)
Q Consensus 184 ~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (578)
+|.+++++.+++|||..|++......+..+ .+...++. +|++ +. ++. +
T Consensus 144 g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~---~~~~-~~--------------------~~~----~--- 191 (382)
T TIGR00902 144 GSALFGGLIGMFDEQNILAILTAGLAFMLI-GFLIKPTI---PPKD-AI--------------------PED----E--- 191 (382)
T ss_pred HHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHcCCCC---CCCc-cc--------------------ccc----c---
Confidence 999999999999999999887654333222 22222211 1111 00 000 0
Q ss_pred hhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccchhh
Q 043156 264 DKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQTFS 343 (578)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (578)
. ..++.. .+-.++ |+..... .....++.....+.++.
T Consensus 192 --------------~------------------------~~~~~~-~~~l~~-~~~~~~l---~~~~l~~~~~~~~~~~~ 228 (382)
T TIGR00902 192 --------------S------------------------QGDSAF-IALLKN-PMNLRFL---AAVCLIQGAHAAYYGFS 228 (382)
T ss_pred --------------c------------------------ccchhH-HHHHcC-hHHHHHH---HHHHHHHHHHHHHHHHH
Confidence 0 000000 000111 2221111 11111222222222221
Q ss_pred hhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHH
Q 043156 344 IQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEV 423 (578)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~ 423 (578)
..... +.... ....+.......+..++..++.+++.+|+..| +.+.+|.++..+..+.+++.+
T Consensus 229 ~~~l~--~~g~s---~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~-----------~~l~~~~~~~~~~~~~~~~~~- 291 (382)
T TIGR00902 229 AIYWQ--AAGIS---ASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR-----------DLLLISAIACVGRWAIIGAIE- 291 (382)
T ss_pred HHHHH--HCCCC---HhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH-----------HHHHHHHHHHHHHHHHHHhHh-
Confidence 11111 11111 11123344456666666667777776655555 567788888888887776644
Q ss_pred HHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHH-HHHHHHHHHHHH
Q 043156 424 IRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLW-CSMALGYFFSTI 502 (578)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~ig~~lg~~ 502 (578)
+++.++..-++.++..++..+....++.+. |++.|++++++++ +...+|..+++.
T Consensus 292 -----------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~ 347 (382)
T TIGR00902 292 -----------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTA 347 (382)
T ss_pred -----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 556666667999999999999999999988 9999999999986 567899999999
Q ss_pred HHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHH
Q 043156 503 LVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSV 548 (578)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~ 548 (578)
+.|.+.+.. ++ ..|+..+++++++.++
T Consensus 348 ~~G~l~~~~------------------g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 348 FAGFIYPTL------------------GA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHhc------------------cH-HHHHHHHHHHHHHHHH
Confidence 999887311 12 4577777777766544
No 71
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.87 E-value=1.8e-20 Score=204.63 Aligned_cols=401 Identities=14% Similarity=0.095 Sum_probs=244.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhcc
Q 043156 62 AEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTA 141 (578)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g 141 (578)
.+.+++.+...++..++.++.|+++|++ |||++++++.+.+.++.++. +.+.+...++++|++.|+|.|
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~----------~~a~~~~~l~~GR~l~G~g~G 157 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIII----------ALAPSWYQLIVGRILTGLGVG 157 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHH----------HHhhhHHHHHHHHHHhccchh
Confidence 3558999999999999999999999998 99999999999999888776 556799999999999999999
Q ss_pred ccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccc-cCchhHHHHHHHHHHHHHHHHHhcCC
Q 043156 142 GIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDN-KGWDRGFGLSSVAVFLATIIFAAGLP 220 (578)
Q Consensus 142 ~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~-~g~~~~f~i~~~~~~~~~~~~~~~~~ 220 (578)
......+.+++|..|++. |+...+.++...++|..++..++....+. ++||..+.+..+..++..+..++ .+
T Consensus 158 ~~~~~~piy~sEiap~~~------RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~-~p 230 (513)
T KOG0254|consen 158 GASVLAPVYISEIAPAHI------RGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLF-LP 230 (513)
T ss_pred hhhhcchhhHhhcCChhh------hHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHh-CC
Confidence 999999999999999987 99999999999999999995544444332 48999998888877666555332 22
Q ss_pred CceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhcccCCC---CCccchhhHhhhhccCccccc
Q 043156 221 LYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIETEFLPH---RDIFRFLDKAAIQKTSTENLE 297 (578)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 297 (578)
|+|+++.++++.++++.....+.. .+.....+..+.+.... .+
T Consensus 231 --------------------------------esp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~--~~ 276 (513)
T KOG0254|consen 231 --------------------------------ESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVE--AE 276 (513)
T ss_pred --------------------------------CChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHh--hh
Confidence 222222222222222221111111 00000000000000000 00
Q ss_pred cccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccch-hhhhhhccCCCCCCCceeeCCCcccCchhHHHHHH
Q 043156 298 ITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQT-FSIQQGLTMDTSVTTSFHIPPASLPILPILFMILA 376 (578)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~ 376 (578)
..+....|+.... ...+|+....+.+..++.........+++ .+.+.. ++..+......+..+..++.
T Consensus 277 ~~~~~~~~~~l~~--~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~---------g~~~~~~~~~~~~~~v~~~~ 345 (513)
T KOG0254|consen 277 VAEGKASWGELFS--PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA---------GLKSDTFLASIILGVVNFLG 345 (513)
T ss_pred cccccccHHHhcC--cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc---------CCCCchHHHHHHHHHHHHHH
Confidence 0000011111111 11233333222222222221111111111 111111 11111112222233444455
Q ss_pred HHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHH
Q 043156 377 VPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFF 456 (578)
Q Consensus 377 ~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 456 (578)
..+...++||++|| ..+..|...+.+++++++.......+.. + ......+..++...+
T Consensus 346 t~~~~~lvd~~gRr-----------~lll~s~~~m~~~~~~~~~~~~~~~~~~---~--------~~~~~~~~~~~~~~~ 403 (513)
T KOG0254|consen 346 TLVATYLVDRFGRR-----------KLLLFGAAGMSICLVILAVVGVFALYYP---N--------SSKGAGWLAIVFLCL 403 (513)
T ss_pred HHHHHHHHHHhccH-----------HHHHHhHHHHHHHHHHHHHHHHHhccCC---C--------cccchhHHHHHHHHH
Confidence 55556788888887 5788899999999988877653210000 0 011223334444444
Q ss_pred HHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHH
Q 043156 457 IFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFW 536 (578)
Q Consensus 457 l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 536 (578)
........+.|..+.+..|++|.+.|+.+.++....+.+.+.+-....+...... + ....|.
T Consensus 404 ~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~-------~-----------~~~~f~ 465 (513)
T KOG0254|consen 404 FIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEAL-------G-----------IGGTFG 465 (513)
T ss_pred HHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhc-------c-----------ccchHH
Confidence 4555555678888899999999999999999999999988888776665554210 0 113566
Q ss_pred HHHHHHHHHHH-HHhhhccccccccccccC
Q 043156 537 LLSALSFINFS-VYLFMSSRYNYRPQTSVG 565 (578)
Q Consensus 537 ~~~~~~~i~~i-~~~~~~~~~~~~~~~~~~ 565 (578)
.++.++.+..+ +.+++.+++++++.|+..
T Consensus 466 ~f~~~~~~~~~~fv~~~~pETkg~sleei~ 495 (513)
T KOG0254|consen 466 YFGGICLLSLIIFVFFFVPETKGLTLEEIN 495 (513)
T ss_pred HHHHHHHHHHHHHheEEcccCCCCcHHHHH
Confidence 77777777777 788889999998877543
No 72
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.87 E-value=1.7e-20 Score=198.20 Aligned_cols=390 Identities=10% Similarity=0.016 Sum_probs=237.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
|..|.+....++...++..+.++++.|+++++|.|..+.+++.+.+.++..++.++.|+++||+ ||||.++.+.+..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLV 80 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4567777788888888888899999999999999999999999999999999999999999998 999999887665542
Q ss_pred CCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHH
Q 043156 106 PPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISV 185 (578)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p 185 (578)
+...... ...............++.+++.+++.+...|....+..|..+ + ++..++..+...++|..++|
T Consensus 81 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~------~~~~~g~~~~~~~~g~~~g~ 150 (396)
T TIGR00882 81 LFAPFFI--YVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--N------SNFEYGKARMFGCVGWALCA 150 (396)
T ss_pred HHHHHHH--HHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--h------cccccchhhhhcccHHHHHH
Confidence 2111000 000000001123344566777888887777777666655322 1 45567788888899999999
Q ss_pred HHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhh
Q 043156 186 TLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDK 265 (578)
Q Consensus 186 ~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (578)
.+++.+.+ .+|+++|++.+++.++..+..+...++. |++ +... ...++ +
T Consensus 151 ~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~---------------~~~~~-----~----- 199 (396)
T TIGR00882 151 SIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKA----PSS-ATVA---------------NALGA-----N----- 199 (396)
T ss_pred HHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCC----chh-hhhh---------------ccccc-----c-----
Confidence 99998865 5999999998877666554443322211 111 0000 00000 0
Q ss_pred hhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhh-hccchhhh
Q 043156 266 EAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCL-AQLQTFSI 344 (578)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 344 (578)
+ +..+.-+.. +..++ |.....+...+.....+... .+.+.+..
T Consensus 200 ----------~-~~~~~~~~~------------------------~~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~y~~ 243 (396)
T TIGR00882 200 ----------A-SAFSLKLAL------------------------ELFRQ-RKFWMFVLYVVGVACVYDVFDQQFANFFT 243 (396)
T ss_pred ----------c-CCCCHHHHH------------------------HHHcC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000000000 00111 11111111212211112222 22222222
Q ss_pred hhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHH
Q 043156 345 QQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVI 424 (578)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~ 424 (578)
.... +...+ ....+.+.+...+...+..+..+++.||+++| +.+.++.++.++++.......
T Consensus 244 ~~~~--~~~~~---~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~-----------~~l~~~~~l~~l~~~~~~~~~-- 305 (396)
T TIGR00882 244 SFFA--TPQQG---TRVFGYVTTMGELLNALIMFCAPLIINRIGAK-----------NALLIAGTIMSVRIIGSSFAT-- 305 (396)
T ss_pred Hhcc--ccccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----------hhHHHHHHHHHHHHHHHHhcC--
Confidence 2111 11110 00112344445556666677788888777766 345667777766665544321
Q ss_pred HHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHH-HHHHHHHHHHHHHHH
Q 043156 425 RKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCF-LWCSMALGYFFSTIL 503 (578)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~-~~~~~~ig~~lg~~~ 503 (578)
+.+++.+..++.+++..........+..+..|++.+++..+. .+....+|+.+++.+
T Consensus 306 ----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l 363 (396)
T TIGR00882 306 ----------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTL 363 (396)
T ss_pred ----------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHh
Confidence 455556667777887776666667777788899999887766 678899999999999
Q ss_pred HHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhh
Q 043156 504 VNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLF 551 (578)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 551 (578)
.+.+.+. .+|+..|.+.+++.++..++..+
T Consensus 364 ~G~l~~~------------------~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 364 AGNMYDS------------------IGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHHh------------------cccHHHHHHHHHHHHHHHHHHHH
Confidence 9887631 24667888888888877766554
No 73
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.87 E-value=9e-21 Score=199.34 Aligned_cols=402 Identities=14% Similarity=0.079 Sum_probs=253.7
Q ss_pred hcC--CCHHHH----HHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhHHH
Q 043156 56 VLH--LDLAEA----ANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALL 129 (578)
Q Consensus 56 ~lg--~s~~~~----~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (578)
.+| .+.++. +.+++++.+++.++..++|+++||+ |||..+.++.++..++.++.. ......+..++
T Consensus 48 r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~-------~s~~~~~~e~l 119 (485)
T KOG0569|consen 48 RYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMG-------LSKSAPSFEML 119 (485)
T ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHH-------HHHHhhhHHHH
Confidence 445 555443 5566778999999999999999998 999999999888886655541 11234788899
Q ss_pred HHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHH-H-HhccccCchhHHHHHHHH
Q 043156 130 FVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLI-V-WIQDNKGWDRGFGLSSVA 207 (578)
Q Consensus 130 ~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~-~-~l~~~~g~~~~f~i~~~~ 207 (578)
+++|++.|+..|......+.++.|..|++. ||..-.+...+.++|..++..++ . .+.+...|++.+.+..+.
T Consensus 120 i~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~ 193 (485)
T KOG0569|consen 120 ILGRLIVGLACGLSTGLVPMYLTEISPKNL------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIP 193 (485)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhhcChhhh------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHH
Confidence 999999999999999999999999999997 99999999999999999996655 2 334555699999988888
Q ss_pred HHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhh-hchhhhhhhhcccCCCCCc-cchhhH
Q 043156 208 VFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYE-INMDKEAAIETEFLPHRDI-FRFLDK 285 (578)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~ 285 (578)
.++.++...+ .||+|+++.. +++.++++...+.++..++ .+..+.
T Consensus 194 ~~~~l~~l~~---------------------------------~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~ 240 (485)
T KOG0569|consen 194 ALLQLALLPF---------------------------------LPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEE 240 (485)
T ss_pred HHHHHHHHhc---------------------------------CCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHH
Confidence 7777665543 3556666655 4444444444433332211 111111
Q ss_pred --hhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhh-hccchhhhhhhccCCCCCCCceeeC-
Q 043156 286 --AAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCL-AQLQTFSIQQGLTMDTSVTTSFHIP- 361 (578)
Q Consensus 286 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~- 361 (578)
...+.++.. .+....+....++ ...|+.+...+.+...+..-.... .++.+.+...+ |+...
T Consensus 241 ~~~e~~~~~~~----~~~~~sl~~~~~~-~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~a---------G~~~~~ 306 (485)
T KOG0569|consen 241 MLREIEEEELE----KKKQISLRQLLKN-PTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTA---------GFTPEE 306 (485)
T ss_pred HHHHHHHhccc----cccCCcHHHHhcC-cchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHc---------CCCHHH
Confidence 111111000 0011111111111 011222222211111111111111 11111222211 11111
Q ss_pred CCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCC
Q 043156 362 PASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVV 441 (578)
Q Consensus 362 ~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (578)
....+....+..++...+...++||++|| ..++++..++.+..+++..........
T Consensus 307 a~~an~~~g~v~~~~t~~~~~lid~~gRR-----------pLll~~~~~~~~~~~~~~~~~~l~~~~------------- 362 (485)
T KOG0569|consen 307 AQYANLGIGIVNLLSTLVSPFLIDRLGRR-----------PLLLISLSLMAVALLLMSIALFLSNSF------------- 362 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----------HHHHHHHHHHHHHHHHHHHHHHHHHHh-------------
Confidence 22333444566666777778888888888 577778888887777776665332111
Q ss_pred CCccchhhHHHHHHHHHHH-HHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCC
Q 043156 442 QPLPISTFWLSIQFFIFGI-ADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGW 520 (578)
Q Consensus 442 ~~~~~~~~~~i~~~~l~g~-g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~ 520 (578)
.++-.+..+...+++.+ ......|..+-+..|.+|++.|+.++++....+++.+++-....+.+.....
T Consensus 363 --~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g-------- 432 (485)
T KOG0569|consen 363 --GSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG-------- 432 (485)
T ss_pred --hhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------
Confidence 01111222333333333 4445689999999999999999999999999999999999988887764221
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhccccccccccc
Q 043156 521 LAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYNYRPQTS 563 (578)
Q Consensus 521 ~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~ 563 (578)
. ++|..+.+.++++.+..+...+++|+|+-++
T Consensus 433 -------~----~~filF~i~~~~~~i~~~~~lPETkgr~~~e 464 (485)
T KOG0569|consen 433 -------P----YVFILFVIPLAIFLIYLYRYLPETKGRTPYE 464 (485)
T ss_pred -------c----hhhHHHHHHHHHHHHHHHHhCcccCCCCHHH
Confidence 1 5788899999999999999999999886544
No 74
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.86 E-value=3.3e-20 Score=187.50 Aligned_cols=393 Identities=15% Similarity=0.077 Sum_probs=266.2
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhh
Q 043156 22 HGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGS 101 (578)
Q Consensus 22 ~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 101 (578)
+.++|..++ ....+..++.-+.+.+.+.+++++++|+|..|.+++.++..+.+.+..++-|.+.||+ |.|++..++.+
T Consensus 10 ~~~~~~L~~-S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~~ 87 (417)
T COG2223 10 RIARRNLWL-STLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSML 87 (417)
T ss_pred cchhHHHHH-HHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHHH
Confidence 445666664 4455566666677888888999999999999999999999999999999999999998 99999999999
Q ss_pred hhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHH
Q 043156 102 VEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGG 181 (578)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~ 181 (578)
+..++.+.+. .....++.+.+++.+++.|++.|. .....++++.+||+++ ++.++|++. ..|+|.
T Consensus 88 l~~IP~~~~~-------~a~~~~~~~~ll~~gll~G~~Gas-Fav~m~~~s~~fP~~~------qG~AlGI~g-~GN~G~ 152 (417)
T COG2223 88 LLLIPCLGLA-------FAVTYPSTWQLLVIGLLLGLAGAS-FAVGMPNASFFFPKEK------QGLALGIAG-AGNLGV 152 (417)
T ss_pred HHHHHHHHHH-------HHccCCchHHHHHHHHHHhcccce-ehcccccccccCChhh------hhHHHHHhc-cccccH
Confidence 9887765541 112223446888888998988654 5667788999999987 899999999 999999
Q ss_pred HHHHHHHHHhccccC---chhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhh
Q 043156 182 AISVTLIVWIQDNKG---WDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMEL 258 (578)
Q Consensus 182 ~~~p~l~~~l~~~~g---~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (578)
.+...+++++....+ |+..-.+..+..++..+..++..++.+...+.. ++. .+
T Consensus 153 av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~-~~~-----------------~~------ 208 (417)
T COG2223 153 AVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASV-KPQ-----------------LP------ 208 (417)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccc-ccc-----------------ch------
Confidence 999999999988888 999888888887776666666554332211111 000 00
Q ss_pred hhhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhc
Q 043156 259 YEINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQ 338 (578)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~ 338 (578)
..+ +.+..+|+.-....+......-+..+..
T Consensus 209 ----------------------~~~---------------------------~~v~~~~~~W~lsllY~~tFG~Fvgfs~ 239 (417)
T COG2223 209 ----------------------AQL---------------------------KAVFSNKDTWLLSLLYFATFGGFVGFSA 239 (417)
T ss_pred ----------------------hHH---------------------------HHHhcCcchHHHHHHHHHHHHHHHHHHH
Confidence 000 0011111111222222333333333333
Q ss_pred cchhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHH
Q 043156 339 LQTFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIA 418 (578)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~ 418 (578)
..+.+.......+ ....+.+....++...+.-|+.+++.||++.+ +.+.+.+..++++..+.
T Consensus 240 ~l~~~~~~~fg~~-------~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~-----------rv~~~~f~~~~~~~~~l 301 (417)
T COG2223 240 YLPMYLVTQFGLS-------PVTAGLIAFLFPLIGALARPLGGWLSDRIGGR-----------RVTLAVFVGMALAAALL 301 (417)
T ss_pred HHHHHHHHhcCCC-------hhhHHHHHHHHHHHHHHHHhccchhhhhccch-----------hHHHHHHHHHHHHHHHH
Confidence 3332222211111 22344566667888999999999999999887 45666777777777666
Q ss_pred HHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHH
Q 043156 419 AIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYF 498 (578)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~ 498 (578)
....+. .....+.+..+..++..++..++-+-..+.++..+.|+ +.|.+.|+.....++|++
T Consensus 302 ~~~~~~-----------------~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf 363 (417)
T COG2223 302 SLFLTG-----------------FGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGF 363 (417)
T ss_pred Hccccc-----------------cccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhcccccc
Confidence 654310 00123344444444444554444455555666666654 678889999999999988
Q ss_pred HHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhccccc
Q 043156 499 FSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYN 557 (578)
Q Consensus 499 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~ 557 (578)
.-|...+...+.| +.++.+|+.+..+.+++.+..+..+.|.+
T Consensus 364 ~lp~~~g~~~~~t-----------------g~~~~~f~~~~~~~~~a~v~~~~~y~r~~ 405 (417)
T COG2223 364 FLPLAFGVSLDLT-----------------GSYTGAFMLLLAFYLVALVLTWALYARRR 405 (417)
T ss_pred chhHHHHHHHHhc-----------------ccHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 8888877766433 34668899999999999999988877754
No 75
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.86 E-value=6.4e-20 Score=192.96 Aligned_cols=336 Identities=10% Similarity=0.012 Sum_probs=211.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchh----hhhhhhhhhhccCCcc
Q 043156 34 AFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRF----KAVLISGSVEFLPPPC 109 (578)
Q Consensus 34 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr----~~~~~~~~~~~~~~~~ 109 (578)
..++...++....++++.|+ +++|.|..++|++.+.+.+...++.++.|.++||+ ||| +.+.++..+..+ ..
T Consensus 12 ~~~~~~~~~g~~~p~l~~~l-~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~--~~ 87 (382)
T PRK11128 12 SYFGYFFAYGVFLPFWSVWL-KGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLFAV--AF 87 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHH-HhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHHHH--HH
Confidence 34455556666778899998 56899999999999999999999999999999998 983 443333322221 11
Q ss_pred cccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 043156 110 NVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIV 189 (578)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~ 189 (578)
. ...++.+.+++.|++.+++.+...|...++..++ . ++ |++.++..+...++|..+||.+++
T Consensus 88 ~----------~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-~-~~------~~~a~~~~~~~~~lg~~igp~lgg 149 (382)
T PRK11128 88 W----------FGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW-Q-KQ------IGLDYGKVRLWGSIAFVIGSALTG 149 (382)
T ss_pred H----------HhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH-H-hh------ccCCcchHHHHHHHHHHHHHHHHH
Confidence 1 2246678888899999999998888877777775 2 22 788888888899999999999999
Q ss_pred HhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhh
Q 043156 190 WIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAI 269 (578)
Q Consensus 190 ~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (578)
++.+++|||..|++.++..++..+.. +..++ ++|++ +. +.. .
T Consensus 150 ~l~~~~g~~~~f~~~~~~~~~~~~~~-~~~~~---~~~~~-~~--------------------~~~----~--------- 191 (382)
T PRK11128 150 KLVSWFGEQAILWILTAGVASMLLGQ-LLRPT---IMPQG-ES--------------------RQQ----E--------- 191 (382)
T ss_pred HHHHHcChhHHHHHHHHHHHHHHHHH-HccCC---CCCcc-cc--------------------ccc----c---------
Confidence 99999999999988776544443322 22221 11111 00 000 0
Q ss_pred hcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHH-HHHHHHHHHHhhhccchhhhhhhc
Q 043156 270 ETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIP-IFCCTIVMTLCLAQLQTFSIQQGL 348 (578)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 348 (578)
+... ..++ .....|+...... .++....+...+... +.+..+ .
T Consensus 192 ------~~~~-----------------------~~~~-----~i~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~-~ 235 (382)
T PRK11128 192 ------SAGW-----------------------PAWK-----ALLKEPTVWRFLLCVSLLQGSHAAYYGFS-AIYWQA-A 235 (382)
T ss_pred ------cccc-----------------------chHH-----HHHcChhHHHHHHHHHHHHHHhHhHHHHH-HHHHHH-C
Confidence 0000 0000 0101112211111 111111111111111 112111 1
Q ss_pred cCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhh
Q 043156 349 TMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDV 428 (578)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~ 428 (578)
+.+. ...+.+...+.+..++...+.+++.||+.+| +.+.++.++.+++++.+...+
T Consensus 236 g~s~-------~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-----------~~l~~~~~~~~~~~~~~~~~~------ 291 (382)
T PRK11128 236 GYSA-------STIGYLWSLGVVAEVLIFAFSNRLFRRWSAR-----------DLLLLSAICGVVRWGLMGSTT------ 291 (382)
T ss_pred CCCH-------hHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH-----------HHHHHHHHHHHHHHHHHHhhh------
Confidence 1111 1123344455566666667777777665555 456677777777766655433
Q ss_pred hhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHH-HHHHHHHHHHHHHHHhh
Q 043156 429 ARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLW-CSMALGYFFSTILVNIV 507 (578)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~ig~~lg~~~~~~~ 507 (578)
+.+++++..++.+++++...+....+..+. |++.++++++..+ ..+.+|..+|+.+.|.+
T Consensus 292 ------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l 352 (382)
T PRK11128 292 ------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFL 352 (382)
T ss_pred ------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555666677888999999899998988887 5566789999886 55678889999999988
Q ss_pred h
Q 043156 508 N 508 (578)
Q Consensus 508 ~ 508 (578)
.
T Consensus 353 ~ 353 (382)
T PRK11128 353 Y 353 (382)
T ss_pred H
Confidence 7
No 76
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.86 E-value=1e-20 Score=197.28 Aligned_cols=166 Identities=17% Similarity=0.152 Sum_probs=134.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccC
Q 043156 27 TSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLP 106 (578)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~ 106 (578)
..+..++..+......+...+.+|.++++++|+|..+.+++.+.+.+++.++.++.|+++||+ ||||++.++.++..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIP 80 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence 456667777777777777778888789999999999999999999999999999999999998 9999999999888866
Q ss_pred CcccccCCCCCccccccc-hhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHH
Q 043156 107 PPCNVFDPTAGCKKIEGS-DAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISV 185 (578)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p 185 (578)
.++. .... +.+.+++.|+++|++.+.. +...++++|++|+++ |++..+++....++|..+++
T Consensus 81 ~~~~----------~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~ 143 (366)
T TIGR00886 81 CLWA----------GLAVQSYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKKI------QGTALGLAAGWGNMGGGVAQ 143 (366)
T ss_pred HHHH----------HHHhhhHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCHhh------hhHHHHHHHHHhHHHHHHHH
Confidence 5553 3345 7888899999999996654 556789999999886 99999999988888888888
Q ss_pred HHHHHhcc----------ccCchhHHH-HHHHHHHH
Q 043156 186 TLIVWIQD----------NKGWDRGFG-LSSVAVFL 210 (578)
Q Consensus 186 ~l~~~l~~----------~~g~~~~f~-i~~~~~~~ 210 (578)
.+++.+.. +.+||+.|+ +.++...+
T Consensus 144 ~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 179 (366)
T TIGR00886 144 FVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLL 179 (366)
T ss_pred HHHHHHHHHHHhcccccccccccchhHHHHHHHHHH
Confidence 77766543 348999994 43444333
No 77
>PRK10133 L-fucose transporter; Provisional
Probab=99.86 E-value=9.8e-20 Score=194.74 Aligned_cols=156 Identities=17% Similarity=0.114 Sum_probs=126.5
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhh
Q 043156 22 HGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGS 101 (578)
Q Consensus 22 ~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 101 (578)
+++...++.+....+...+........+| .+++++|.|..+.++..+.+.+++.++.++.|+++||+ ||||++.++.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~ 99 (438)
T PRK10133 22 RSYIIPFALLCSLFFLWAVANNLNDILLP-QFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLF 99 (438)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 44555666666666666666665555555 45999999999999999999999999999999999998 99999999999
Q ss_pred hhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHH
Q 043156 102 VEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGG 181 (578)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~ 181 (578)
+++++.++. ......+++..++++|+++|+|.|...++.++++.|+.|+++ |...+++......+|.
T Consensus 100 ~~~~~~~l~-------~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~------~~~~~s~~~~~~~~G~ 166 (438)
T PRK10133 100 LYALGAALF-------WPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS------GHFRLNLAQTFNSFGA 166 (438)
T ss_pred HHHHHHHHH-------HHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh------HHHHHHHHHHHHHHHH
Confidence 999776442 001235778899999999999999999999999999765553 6667889999999999
Q ss_pred HHHHHHHHHhc
Q 043156 182 AISVTLIVWIQ 192 (578)
Q Consensus 182 ~~~p~l~~~l~ 192 (578)
.++|.+++.+.
T Consensus 167 ~~g~~~g~~l~ 177 (438)
T PRK10133 167 IIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHH
Confidence 99998877543
No 78
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.86 E-value=2.5e-20 Score=222.75 Aligned_cols=349 Identities=14% Similarity=0.019 Sum_probs=207.2
Q ss_pred HHHhcCCCH-HHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhh--hccCCcccccCCCCCccccccchhHHH
Q 043156 53 FNGVLHLDL-AEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSV--EFLPPPCNVFDPTAGCKKIEGSDAALL 129 (578)
Q Consensus 53 l~~~lg~s~-~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (578)
+....+.+. ...++..+++.+...++.+++|+++||+ |||+++...... ......+. + ....+++.+
T Consensus 42 ~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~-------~--~~~~s~~~l 111 (1140)
T PRK06814 42 LSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIY-------G--FHLNSVPLL 111 (1140)
T ss_pred hccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHH-------H--HHHhhHHHH
Confidence 333444433 4467888889999999999999999998 999976432211 11111010 0 122678899
Q ss_pred HHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHHHHHHHHH
Q 043156 130 FVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGLSSVAVF 209 (578)
Q Consensus 130 ~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i~~~~~~ 209 (578)
++.|+++|++.+...|+..+++.|++|+++ |++++++.+.+.++|.++||.++|++....+|++.|.+.++..+
T Consensus 112 ~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~ 185 (1140)
T PRK06814 112 FAALFLMGIHSALFGPIKYSILPDHLNKDE------LLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAV 185 (1140)
T ss_pred HHHHHHHHHHHHhhchHHHHhhHhhcCccc------cchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 999999999999999999999999999987 99999999999999999999999999998999999855444444
Q ss_pred HHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhcccCCCCCccchhhHhhhh
Q 043156 210 LATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIETEFLPHRDIFRFLDKAAIQ 289 (578)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (578)
+++++.+...+ .+.+++.. .. ..+. .. +..
T Consensus 186 ~~~~~~~~~~~-~~~~~~~~-~~-------------------~~~~---~~-----------------------~~~--- 215 (1140)
T PRK06814 186 LGWLASLFIPK-TGNAAPDL-KI-------------------DRNI---IR-----------------------STI--- 215 (1140)
T ss_pred HHHHHHhhCCC-CCCCCCCC-ee-------------------ccch---HH-----------------------HHH---
Confidence 44443333222 11111100 00 0000 00 000
Q ss_pred ccCccccccccCCCCCccccchhhhhHHHHHhHH-HHHHHHHHHHHhhhccchhhhhhhccCCCCCCCceeeCCCcccCc
Q 043156 290 KTSTENLEITEAPNPWKLCRVTQVENAKIILGMI-PIFCCTIVMTLCLAQLQTFSIQQGLTMDTSVTTSFHIPPASLPIL 368 (578)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (578)
..++ .....+.+.... ..+.....+.....+.+.+. .+..+.+ ....+.+.+.
T Consensus 216 -------------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~g~~-------~~~~g~~~~~ 269 (1140)
T PRK06814 216 -------------TLLK-----YAKADKRIWLAILGISWFWLVGAVVLSQLPLLA-KETLGGD-------ENVATLFLAV 269 (1140)
T ss_pred -------------HHHH-----HHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHH-HHHcCCc-------hHHHHHHHHH
Confidence 0000 000011111111 11111122222222222222 2211111 1123455666
Q ss_pred hhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchh
Q 043156 369 PILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPIST 448 (578)
Q Consensus 369 ~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (578)
..++.+++..+.+++.++..++ +.+..+.++.+++.+.+.+..... ... ...+-.. ..-....+.
T Consensus 270 ~~~g~~ig~~~~g~l~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~~~-~~~--~~~~~~~-~~~~~~~~~ 334 (1140)
T PRK06814 270 FSVGVAVGSFLASKLSEGRITL-----------LYVPIGALLMGLFGLDLAFASSSV-PAE--PAQLKSI-LVFLSKRHG 334 (1140)
T ss_pred HHHHHHHHHHHHHHHhCCceee-----------eeehHHHHHHHHHHHHHHhccccc-ccc--cccccch-hhhhccccc
Confidence 7788888888888886544433 233444444444444333310000 000 0000000 000001244
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 043156 449 FWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVN 508 (578)
Q Consensus 449 ~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~ 508 (578)
+.+++..++.|++.++..++..+++.+.+|++.||+++|+.++...++..+++.+.+.+.
T Consensus 335 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~ 394 (1140)
T PRK06814 335 WRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQ 394 (1140)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 566677888899999999999999999999999999999999999999999999888775
No 79
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.86 E-value=6.4e-20 Score=219.52 Aligned_cols=362 Identities=14% Similarity=0.066 Sum_probs=221.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH--HHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhh
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDL--AEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVE 103 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~--~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~ 103 (578)
|....+++..++..+...+....+..++..+++.+. ...+++.+.+.++..++.+++|+++||+ |||++++++.++.
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~ 87 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFE 87 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHH
Confidence 445555566666666655555555566666666654 3468899999999999999999999998 9999999887665
Q ss_pred ccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHH
Q 043156 104 FLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAI 183 (578)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~ 183 (578)
.+..++. .......+++.+++.|+++|++.+...|+..++++|++|+++ |+++++++..+.++|.++
T Consensus 88 ~~~~~~~-------~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~ig~~l 154 (1146)
T PRK08633 88 VGLTLLI-------VLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------LSRANGLLEAFTIVAILA 154 (1146)
T ss_pred HHHHHHH-------HHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------chhhhhHHHHHHHHHHHH
Confidence 5332221 001223567889999999999999999999999999999987 999999999999999999
Q ss_pred HHHHHHHhccc--------c-CchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCC
Q 043156 184 SVTLIVWIQDN--------K-GWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPED 254 (578)
Q Consensus 184 ~p~l~~~l~~~--------~-g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (578)
||.+++++.+. + +|.+.+.+.++...+..++..+..++.+...+.. . +.
T Consensus 155 g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------------------~~ 212 (1146)
T PRK08633 155 GTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEV-F---------------------DK 212 (1146)
T ss_pred HHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCccc-c---------------------cc
Confidence 99999998765 2 3444444433332222222222222211110000 0 00
Q ss_pred chhhhhhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHH-HHHHHHHHHH
Q 043156 255 PMELYEINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMI-PIFCCTIVMT 333 (578)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~ 333 (578)
. . .....+..+ .++ .....+.+...+ ...+.....+
T Consensus 213 ~----~---------------~~~~~~~~~-------------------~~~-----~l~~~~~~~~~~~~~~~~~~~~~ 249 (1146)
T PRK08633 213 K----K---------------YLFPKLLWR-------------------NLK-----LLRSDRVLWLAIIGLSYFWFISQ 249 (1146)
T ss_pred c----c---------------cccHHHHHH-------------------HHH-----HHhcCcHHHHHHHHHHHHHHHHH
Confidence 0 0 000000000 000 000011111111 1111111111
Q ss_pred HhhhccchhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHH
Q 043156 334 LCLAQLQTFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCI 413 (578)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~ 413 (578)
.....++.++ ....+.+.. ...+.+.....++.++...+.+++.+|..++ +.+.++.+++++
T Consensus 250 ~~~~~~~~~~-~~~~g~s~~------~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~-----------~~~~~~~~~~~~ 311 (1146)
T PRK08633 250 LAQANFPAYA-KEVLGLDNT------FQVQYLLAASAIGIGIGSLLAGRLSGRHIEL-----------GLVPLGALGLAL 311 (1146)
T ss_pred HHHHhhHHHH-HHHhCCCcH------HHHHHHHHHHHHHHHHHHHHHHHHhCCceEc-----------cchhHHHHHHHH
Confidence 1111112222 211111111 0123455556666777777888877665544 345566666666
Q ss_pred HHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHH
Q 043156 414 SMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSM 493 (578)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~ 493 (578)
+++++.+.. +.+.+++..++.+++.++..+..++++.+.+|++.||+++|+.++..
T Consensus 312 ~~~~~~~~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~ 367 (1146)
T PRK08633 312 SLFLLPTAP------------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQ 367 (1146)
T ss_pred HHHHHHHhh------------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHH
Confidence 666555432 45566667788889988888889999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhh
Q 043156 494 ALGYFFSTILVNIVN 508 (578)
Q Consensus 494 ~ig~~lg~~~~~~~~ 508 (578)
.++..+++.+.+.+.
T Consensus 368 ~lg~~~~~~~~~~l~ 382 (1146)
T PRK08633 368 NVGMLLFLALTTLFS 382 (1146)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999988877766553
No 80
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.85 E-value=3.8e-21 Score=195.60 Aligned_cols=180 Identities=13% Similarity=0.131 Sum_probs=160.1
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhh
Q 043156 22 HGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGS 101 (578)
Q Consensus 22 ~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 101 (578)
+...+.+.++++++.+++..-|.+-. .-.-.++.+|++.+..|.+.+.+.+...++.|+.|+++||+ .||+++.+|..
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iag-v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~ 106 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAG-VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIF 106 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhh-hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHH
Confidence 34467788999999999999998766 44567889999999999999999999999999999999999 99999999999
Q ss_pred hhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHH
Q 043156 102 VEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGG 181 (578)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~ 181 (578)
+|.++.+.. .+...++++.+.|.+.|+|.+.+.|.++++++|.||..+ |++.++++|++.++|.
T Consensus 107 iW~~Av~~~----------~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~------Rs~~~~ify~~ipvGs 170 (493)
T KOG1330|consen 107 IWTLAVFAS----------GFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK------RSRVLGIFYFAIPVGS 170 (493)
T ss_pred HHHHHHHHH----------HHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchh------hhHHHHHhhhhccccc
Confidence 999776654 556789999999999999999999999999999999887 9999999999999999
Q ss_pred HHHHHHHHHhccccC-chhHHHHHHHHHHHHHHHHHhcC
Q 043156 182 AISVTLIVWIQDNKG-WDRGFGLSSVAVFLATIIFAAGL 219 (578)
Q Consensus 182 ~~~p~l~~~l~~~~g-~~~~f~i~~~~~~~~~~~~~~~~ 219 (578)
++|.+++..+.+..+ |||.|.+.+++.++..++.+++.
T Consensus 171 glG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~ 209 (493)
T KOG1330|consen 171 GLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFV 209 (493)
T ss_pred ceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhc
Confidence 999999999988776 99999999998776665555543
No 81
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.85 E-value=1.2e-19 Score=194.03 Aligned_cols=355 Identities=12% Similarity=0.070 Sum_probs=218.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhc---cchhh-hhhhhhhhhccCCcc
Q 043156 34 AFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAF---IGRFK-AVLISGSVEFLPPPC 109 (578)
Q Consensus 34 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~Grr~-~~~~~~~~~~~~~~~ 109 (578)
..+..+..+..+.++++.|+++++|++..++|++.+...+...+..|+.|+++||. +|||| .++++.+..+++.++
T Consensus 7 g~~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~ 86 (437)
T TIGR00792 7 GDFGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVL 86 (437)
T ss_pred chHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHH
Confidence 34555666677778899999999999999999999999999999999999999982 28866 455666655544333
Q ss_pred cccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 043156 110 NVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIV 189 (578)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~ 189 (578)
+...|. .........+++.+++.+++.+...+...++..|..++++ +|++..++.+.+.++|..+++.+.+
T Consensus 87 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-----~R~~~~~~~~~~~~~g~~l~~~~~~ 157 (437)
T TIGR00792 87 LFTTPD----FSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPR-----ERESLSTFRRFGATLGGLLVAVIVL 157 (437)
T ss_pred HHhCCC----CCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 210000 0001224455667777888888888888889999886433 3999999988888888877766655
Q ss_pred Hhc-------cccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhc
Q 043156 190 WIQ-------DNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEIN 262 (578)
Q Consensus 190 ~l~-------~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (578)
.+. +..+|++.+.+.+++.++..+..+...++.+++.+.. +.+
T Consensus 158 ~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~-----------------------~~~------- 207 (437)
T TIGR00792 158 PLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKN-----------------------IEK------- 207 (437)
T ss_pred HHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcc-----------------------ccc-------
Confidence 443 2468999998888776655544433332211000000 000
Q ss_pred hhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccchh
Q 043156 263 MDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQTF 342 (578)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (578)
.....+. ++ .....|.+...+.........+........+
T Consensus 208 ----------------~~~~~~~-------------------~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (437)
T TIGR00792 208 ----------------KLSLKQI-------------------FK-----ALFKNDQLLILCLAYLFYNLAFNIKNGVQVY 247 (437)
T ss_pred ----------------CCCHHHH-------------------HH-----HHhCCHHHHHHHHHHHHHHHHHHHHcchhhe
Confidence 0000000 00 0000112111111111111111111111122
Q ss_pred hhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHH
Q 043156 343 SIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFE 422 (578)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~ 422 (578)
+..+..+ + ....+.+.....+..++..++.+++.+|+++| +.+.+|.++..++++...+..
T Consensus 248 ~~~~~~~-~-------~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~-----------~~~~~~~~~~~~~~~~~~~~~ 308 (437)
T TIGR00792 248 YFTYVLG-D-------PELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK-----------ILFAGGILLMVLGYLIFFFAG 308 (437)
T ss_pred eEeeecC-C-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----------HHHHHHHHHHHHHHHHHHHcc
Confidence 2111111 0 00112334445677788888999998887766 456667777777766554421
Q ss_pred HHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCC-------chhhHHHHHHHHHHHHH
Q 043156 423 VIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAP-------KGIKSLSTCFLWCSMAL 495 (578)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P-------~~~rg~~~g~~~~~~~i 495 (578)
.+.+.+++..++.+++.+...+..+++..+.+| ++.+|.+.|++++...+
T Consensus 309 -----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 365 (437)
T TIGR00792 309 -----------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKL 365 (437)
T ss_pred -----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHH
Confidence 133444556677888888888888888888765 56789999999999999
Q ss_pred HHHHHHHHHHhhhc
Q 043156 496 GYFFSTILVNIVNS 509 (578)
Q Consensus 496 g~~lg~~~~~~~~~ 509 (578)
|..+++.+.+.+.+
T Consensus 366 g~~lg~~i~g~ll~ 379 (437)
T TIGR00792 366 GQALAGFLVGLILG 379 (437)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998864
No 82
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.84 E-value=2.3e-19 Score=188.23 Aligned_cols=149 Identities=15% Similarity=0.057 Sum_probs=111.5
Q ss_pred HHHHHHHHhcC--CCHHHHHHHHHHH-----HHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccc
Q 043156 48 NLVTYFNGVLH--LDLAEAANQVTNY-----MGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKK 120 (578)
Q Consensus 48 ~l~~yl~~~lg--~s~~~~~~~~~~~-----~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (578)
+...++.++.. .++++.+.+.+.. .+...++.++.|+++||+ ||||++.++.++..++.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~---------- 82 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLI---------- 82 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHH----------
Confidence 44455555644 3445555544432 233346789999999998 99999999998888665543
Q ss_pred cccch--------hHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhc
Q 043156 121 IEGSD--------AALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQ 192 (578)
Q Consensus 121 ~~~~~--------~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~ 192 (578)
...++ ...+++.|+++|++.+...+...+++.|.+|+++ |++..++.+.+..+|..+++.+++.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~G~~i~~~~~~~~~ 156 (394)
T TIGR00883 83 GLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK------RGFYGSFQQVGAPVGLLLAALTVLLLS 156 (394)
T ss_pred hhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc------chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222 2357889999999999999999999999999887 999999999999999999998876653
Q ss_pred --------cccCchhHHHHHHHHHHHHHH
Q 043156 193 --------DNKGWDRGFGLSSVAVFLATI 213 (578)
Q Consensus 193 --------~~~g~~~~f~i~~~~~~~~~~ 213 (578)
+.++||+.|.+.++..+++.+
T Consensus 157 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 185 (394)
T TIGR00883 157 YLLGDDALLEWGWRIPFLVSAVLVLIGLY 185 (394)
T ss_pred HhcCHHHhhccchHHHHHHHHHHHHHHHH
Confidence 357899999887766554433
No 83
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.84 E-value=1.3e-18 Score=188.80 Aligned_cols=389 Identities=13% Similarity=0.124 Sum_probs=237.9
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhc----cchhhh-hh
Q 043156 23 GGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAF----IGRFKA-VL 97 (578)
Q Consensus 23 ~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~----~Grr~~-~~ 97 (578)
.++|+.+.++...+......+.....++.+++ +.|.|.++++..... ... .++.++.|.++||+ +||||. +.
T Consensus 9 ~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~-~~g~~~~~ig~~~~~-~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll 85 (491)
T PRK11010 9 FQQPNSAILLILGFASGLPLALTSGTLQAWMT-VENIDLKTIGFFSLV-GQA-YVFKFLWSPLMDRYTPPFLGRRRGWLL 85 (491)
T ss_pred HcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHH-HHH-HHHHHHHHHHHHcccccCCCCchHHHH
Confidence 34566777888888888888888888888875 559999999987333 222 26889999999994 188886 44
Q ss_pred hhhhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHH
Q 043156 98 ISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAV 177 (578)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~ 177 (578)
++.+...++..++. ......+.+.+.+.+++.+++.+...+...+++.|++|+++ |+++.++...+.
T Consensus 86 ~~~i~~~~~~~~~a-------~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~------rg~~~~i~~~g~ 152 (491)
T PRK11010 86 ATQLLLLVAIAAMG-------FLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE------RGAGAAISVLGY 152 (491)
T ss_pred HHHHHHHHHHHHHH-------HcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hHHHHHHHHHHH
Confidence 55555543332220 00113466778888999999999999999999999999876 999999999999
Q ss_pred HHHHHHHHHHHHHhcc-ccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCch
Q 043156 178 CIGGAISVTLIVWIQD-NKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPM 256 (578)
Q Consensus 178 ~lG~~~~p~l~~~l~~-~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (578)
++|..+++.+++++.+ ..|||..|++.++..++..+..++. ++.++.++++ + +.
T Consensus 153 ~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~-~e~~~~~~~~-~----------------------~~- 207 (491)
T PRK11010 153 RLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLA-PEPTDTIPVP-K----------------------TL- 207 (491)
T ss_pred HHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhc-CCCccccccc-c----------------------ch-
Confidence 9999999999999988 4699999999887766655444332 2111000000 0 00
Q ss_pred hhhhhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhh
Q 043156 257 ELYEINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCL 336 (578)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~ 336 (578)
+ + ... .+++ +...+++...............+...
T Consensus 208 ---~----~---------------~~~-------------------~~l~----~~~~~~~~~~~ll~~~l~~~~~~~~~ 242 (491)
T PRK11010 208 ---E----Q---------------AVV-------------------APLR----DFFGRNNAWLILLLIVLYKLGDAFAM 242 (491)
T ss_pred ---h----h---------------hHH-------------------HHHH----HHHcCcCHHHHHHHHHHHHHHHHHHH
Confidence 0 0 000 0000 00000111111111111111111222
Q ss_pred hccchhhhhhhccCCCCCCCceeeCCCccc-CchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHH
Q 043156 337 AQLQTFSIQQGLTMDTSVTTSFHIPPASLP-ILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISM 415 (578)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~ 415 (578)
...++++.+. .+.+.. ..+.+. ....+..++...+.+++.||+++| +.+.++.++..++.
T Consensus 243 ~~~~~~l~~~-~G~s~~-------~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~-----------~~l~i~~~l~~l~~ 303 (491)
T PRK11010 243 SLTTTFLIRG-VGFDAG-------EVGLVNKTLGLLATIVGALYGGILMQRLSLF-----------RALMIFGILQGVSN 303 (491)
T ss_pred HHHHHHHHHh-cCCCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-----------HHHHHHHHHHHHHH
Confidence 2222332221 121111 112222 233456778888888888887766 23344444444433
Q ss_pred HHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHH
Q 043156 416 AIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMAL 495 (578)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~i 495 (578)
+....... ...+.+.+....++..+..++..+...++..+.+|++.+++..|+.+...++
T Consensus 304 l~~~~l~~--------------------~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~l 363 (491)
T PRK11010 304 AGYWLLSI--------------------TDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAV 363 (491)
T ss_pred HHHHHHHh--------------------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Confidence 22221110 0113333344445545555555666778888999999999999999999999
Q ss_pred HHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhcc
Q 043156 496 GYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSS 554 (578)
Q Consensus 496 g~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 554 (578)
|..+++.+.|.+.+ ..+|+..|.+.+++++++++..+.+.+
T Consensus 364 g~~~~~~~~G~l~~------------------~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 364 GRVYVGPVAGWFVE------------------AHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHH------------------HhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99988888887762 124667898888999888888777644
No 84
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.84 E-value=1.2e-18 Score=188.40 Aligned_cols=383 Identities=13% Similarity=0.062 Sum_probs=247.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccC
Q 043156 27 TSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLP 106 (578)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~ 106 (578)
.+..+...+++.+++......-++-++ .++.-|....+.+.....+-..+..+++|.++||+ .|||+++.+-++.++.
T Consensus 11 ~Fr~lw~a~~iS~lG~~~~~va~~wlv-~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~~ 88 (524)
T PF05977_consen 11 NFRRLWIAQLISNLGDWMQTVALAWLV-TQLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRALV 88 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHH
Confidence 334455566666666665555555444 45667889999999999999999999999999998 9999999988776533
Q ss_pred CcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 043156 107 PPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVT 186 (578)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~ 186 (578)
..++. ........+++.+++.-++.|++.+...|+..+++.|+.|+++ ..++.++.....|+.-.+||.
T Consensus 89 ~~~L~-----~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L~~A~al~s~~~niar~iGPa 157 (524)
T PF05977_consen 89 ALLLA-----VLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------LPAANALNSISFNIARIIGPA 157 (524)
T ss_pred HHHHH-----HHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------HHHHHHHHHHHHHHHHhccch
Confidence 22210 0011223567788888899999999999999999999999887 899999999999999999999
Q ss_pred HHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhh
Q 043156 187 LIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKE 266 (578)
Q Consensus 187 l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (578)
++|.+....|-.+.|.+.++..++..+++...+++.+.++..+ ++. ..
T Consensus 158 lgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~~~~~-e~~-------------------------~~------ 205 (524)
T PF05977_consen 158 LGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPPSSLPR-ERF-------------------------FS------ 205 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccch-hhh-------------------------hh------
Confidence 9999988889899999998877666554443332211110000 000 00
Q ss_pred hhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccchhhhhh
Q 043156 267 AAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQTFSIQQ 346 (578)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (578)
+..+ .++ .+...+.+...+........+........+.+..+
T Consensus 206 --------------~l~~-------------------G~r-----yv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~ 247 (524)
T PF05977_consen 206 --------------ALRE-------------------GLR-----YVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARD 247 (524)
T ss_pred --------------hHHH-------------------HHH-----HHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHH
Confidence 0000 000 01111111111111111111111111122333332
Q ss_pred hccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHH
Q 043156 347 GLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRK 426 (578)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~ 426 (578)
..+.+. ...+.+.....++.++++.+..++- +|. +..+.+..+.++.+++++.+++..
T Consensus 248 ~l~~~a-------~~yGll~a~~gvGai~Gal~~~~l~----~~~-------~~~~lv~~~~~~~a~~~~~lal~~---- 305 (524)
T PF05977_consen 248 VLGGGA-------SGYGLLLAAFGVGAILGALLLPRLR----RRL-------SSRRLVLLASLLFALALLLLALSP---- 305 (524)
T ss_pred HhCCcH-------HHHHHHHHHHHHHHHHHHHHHHHhh----ccc-------CcchhhHHHHHHHHHHHHHHhcch----
Confidence 222111 1123455555666666666655543 221 222456667777777777766643
Q ss_pred hhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 043156 427 DVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNI 506 (578)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~ 506 (578)
+.+..++.+++.|++.....+..++..-+.+|+++||+.++++.+....+..+|..+.|.
T Consensus 306 --------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~ 365 (524)
T PF05977_consen 306 --------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGF 365 (524)
T ss_pred --------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556667778888999999999999999999999999999999999999999999999998
Q ss_pred hhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhh
Q 043156 507 VNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFM 552 (578)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 552 (578)
+.+.. +.+..+...++..+++.++.+..
T Consensus 366 la~~~------------------g~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 366 LADHF------------------GVRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred HHHHh------------------CHHHHHHHHHHHHHHHHHHHHHh
Confidence 86321 22345666666555655555443
No 85
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.81 E-value=5.7e-19 Score=183.70 Aligned_cols=325 Identities=14% Similarity=0.103 Sum_probs=208.8
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchh
Q 043156 47 VNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDA 126 (578)
Q Consensus 47 ~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (578)
......+.+++|+|.++.+++.+.+.++..++.++.|+++||+ ||||++.++.++..++.++ + ..++.
T Consensus 20 ~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~--------~---~~~~~ 87 (355)
T TIGR00896 20 GPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILI--------R---SAPGT 87 (355)
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHH--------H---HhccH
Confidence 3344567889999999999999999999999999999999998 9999999988776644333 1 23567
Q ss_pred HHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcccc--CchhHHHHH
Q 043156 127 ALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNK--GWDRGFGLS 204 (578)
Q Consensus 127 ~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~--g~~~~f~i~ 204 (578)
..+++.|++.|++.+...+..+.++.|.+|+ + |++++++++.+.++|..+++.+++.+.++. +||+.|.+.
T Consensus 88 ~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~ 160 (355)
T TIGR00896 88 ALLFAGTALIGVGIAIINVLLPSLIKRDFPQ-R------VGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWW 160 (355)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHhCcc-h------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Confidence 7788999999999998888888888998864 4 899999999999999999999999887654 399988776
Q ss_pred HHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhcccCCCCCccchhh
Q 043156 205 SVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIETEFLPHRDIFRFLD 284 (578)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (578)
++..++..+... ++.+++++++ + + . ...
T Consensus 161 ~~~~~~~~~~~~---~~~~~~~~~~-~--------------------~-~-----------------------~~~---- 188 (355)
T TIGR00896 161 ALPALLALLAWI---PQVRRRVAAN-Q--------------------T-T-----------------------TRL---- 188 (355)
T ss_pred HHHHHHHHHHHh---hhhccccCCC-C--------------------C-C-----------------------CCC----
Confidence 654433322211 1111110000 0 0 0 000
Q ss_pred HhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccchhhhhhhccCCCCCCCceeeCCCc
Q 043156 285 KAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQTFSIQQGLTMDTSVTTSFHIPPAS 364 (578)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (578)
.+++ ..++++.....+...+....++......+.++ +. .+.+. ...+.
T Consensus 189 ------------------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~-~~-~g~~~-------~~~g~ 236 (355)
T TIGR00896 189 ------------------TPVR-----IWRSPLAWQVTVFFGLQSGLYYSLIGWLPAIL-IS-HGASA-------ATAGS 236 (355)
T ss_pred ------------------CCch-----hhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-cCCCH-------HHHHH
Confidence 0000 00111111111111111122222222222222 11 11111 12334
Q ss_pred ccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCc
Q 043156 365 LPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPL 444 (578)
Q Consensus 365 ~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (578)
+.....+..++..++.+++.||+.+|+ +.+.++..+..++.+.+.+..
T Consensus 237 ~~~~~~~~~i~~~~~~g~l~dr~~~~~----------~~~~~~~~~~~~~~~~~~~~~---------------------- 284 (355)
T TIGR00896 237 LLALMQLAQAASALLIPALARRVKDQR----------GIVAVLAVLQLVGLCGLLFAP---------------------- 284 (355)
T ss_pred HHHHHHHHHHHHHHhHHHHHhhhccch----------HHHHHHHHHHHHHHHHHHHhh----------------------
Confidence 555567778888888899888774431 345566777777766555433
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhhhheeeccC-CchhhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 043156 445 PISTFWLSIQFFIFGIADMFTYVGLLEFFYSEA-PKGIKSLSTCFLWCSMALGYFFSTILVNIVNS 509 (578)
Q Consensus 445 ~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~-P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~ 509 (578)
+... +. ..++.|++.+...|...+...+.. +++.+|...++.+....+++.++|.+.+.+.+
T Consensus 285 ~~~~-~~--~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~ 347 (355)
T TIGR00896 285 MHGL-WA--WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHD 347 (355)
T ss_pred hhHH-HH--HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 11 245678888888887767665544 46778999999999999999999999998864
No 86
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.81 E-value=6.5e-18 Score=179.12 Aligned_cols=172 Identities=17% Similarity=0.175 Sum_probs=136.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCC
Q 043156 28 SLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPP 107 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~ 107 (578)
++.++...+...+.+. +...+...+++++|.|..+.+++.+.+.+++.++.++.|+++||+ ||||++.+++++++++.
T Consensus 5 ~~~~~~~f~~~G~~~~-~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFAND-ITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHH-hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 4444545555555543 443444567899999999999999999999999999999999998 99999999999988775
Q ss_pred cccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 043156 108 PCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTL 187 (578)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l 187 (578)
++. .......++..+++.|++.|+|.|...+..++++.+..|+++ |++..++.+...++|..++|.+
T Consensus 83 ~l~-------~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~~~g~~i 149 (410)
T TIGR00885 83 FLF-------WPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRRLNLAQSFNPFGSIIGMVV 149 (410)
T ss_pred HHH-------HHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 442 011223577889999999999999999999999999988876 8899999999999999999999
Q ss_pred HHHhccc--------------------------cCchhHHHHHHHHHHHHHHH
Q 043156 188 IVWIQDN--------------------------KGWDRGFGLSSVAVFLATII 214 (578)
Q Consensus 188 ~~~l~~~--------------------------~g~~~~f~i~~~~~~~~~~~ 214 (578)
++.+... .+||++|++.+++.++..+.
T Consensus 150 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~ 202 (410)
T TIGR00885 150 AQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALL 202 (410)
T ss_pred HHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877321 35999998877765554433
No 87
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.80 E-value=4.2e-18 Score=177.17 Aligned_cols=156 Identities=13% Similarity=0.111 Sum_probs=114.1
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhc----cchhhhh-hhhhhhhccCCcccccCCCCCcccc
Q 043156 47 VNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAF----IGRFKAV-LISGSVEFLPPPCNVFDPTAGCKKI 121 (578)
Q Consensus 47 ~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~----~Grr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (578)
......+.+++|+|.++.++.... .+...+ .++.|.++||+ +||||.+ +++.++.++...++. .. .
T Consensus 8 ~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~------~~-~ 78 (356)
T TIGR00901 8 GNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILS------FL-V 78 (356)
T ss_pred HhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHH------cC-C
Confidence 334445567889999999999655 333344 88999999996 3899975 455544443322220 00 1
Q ss_pred ccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccC-----
Q 043156 122 EGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKG----- 196 (578)
Q Consensus 122 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g----- 196 (578)
...+...+....++.+++.+...++..+++.|++|+++ |+++.++...+.++|.++++.+++++..+.+
T Consensus 79 ~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~ 152 (356)
T TIGR00901 79 PSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------LGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGL 152 (356)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 12344455566667778888888999999999998876 9999999999999999999999999987777
Q ss_pred ---chhHHHHHHHHHHHHHHHHHh
Q 043156 197 ---WDRGFGLSSVAVFLATIIFAA 217 (578)
Q Consensus 197 ---~~~~f~i~~~~~~~~~~~~~~ 217 (578)
||..|++.++..++..+..++
T Consensus 153 ~~~wr~~f~i~ai~~l~~~~~~~~ 176 (356)
T TIGR00901 153 ITLWGYIFFWTALLILPGLLVTLF 176 (356)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHH
Confidence 999999988876665554443
No 88
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.79 E-value=7.6e-18 Score=187.26 Aligned_cols=189 Identities=19% Similarity=0.127 Sum_probs=146.1
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhh
Q 043156 23 GGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSV 102 (578)
Q Consensus 23 ~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~ 102 (578)
+.+|.+.+.+....+....+.+........+.++++++.++.|++.+.+.+++.++.++.|+++||+ ||||.+.++.++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll 107 (633)
T TIGR00805 29 SKIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAI 107 (633)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHH
Confidence 3455554555545555556666667777788999999999999999999999999999999999998 999999999988
Q ss_pred hccCCcccccCCCC-----------------------Ccccc-----------------c--cchhHHHHHHHHHHHHhc
Q 043156 103 EFLPPPCNVFDPTA-----------------------GCKKI-----------------E--GSDAALLFVALYLIATGT 140 (578)
Q Consensus 103 ~~~~~~~~~~~~~~-----------------------~~~~~-----------------~--~~~~~~~~~~~~l~g~g~ 140 (578)
++++.++..+ |.+ .|... . ...+..++++|+++|+|.
T Consensus 108 ~~lg~ll~al-phf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~ 186 (633)
T TIGR00805 108 MGLGSFLLSL-PHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGA 186 (633)
T ss_pred HHHHHHHHhC-hHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccC
Confidence 8877655421 100 01000 0 113557789999999999
Q ss_pred cccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcccc----------------------Cch
Q 043156 141 AGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNK----------------------GWD 198 (578)
Q Consensus 141 g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~----------------------g~~ 198 (578)
+...+...+++.|.+|+++ |++.+++++.+..+|.++|+++++++.+.+ +|+
T Consensus 187 ~~~~~~~~~~i~d~~~~~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWw 260 (633)
T TIGR00805 187 TPIFPLGISYIDDFAKSKN------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWW 260 (633)
T ss_pred CcchhcCchhhhccCCccc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHH
Confidence 9999999999999999987 999999999999999999999999887542 267
Q ss_pred hHHHHHHHHHHHHHHHHHhcC
Q 043156 199 RGFGLSSVAVFLATIIFAAGL 219 (578)
Q Consensus 199 ~~f~i~~~~~~~~~~~~~~~~ 219 (578)
..|++.+++.++..+.++++.
T Consensus 261 l~Fli~g~l~~l~~v~l~~~p 281 (633)
T TIGR00805 261 IGFLICGGVALLTSIPFFFFP 281 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhCc
Confidence 778887777666555444433
No 89
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.79 E-value=1.5e-22 Score=217.62 Aligned_cols=391 Identities=15% Similarity=0.129 Sum_probs=233.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccc---hhHHHHHHHHHHHH
Q 043156 62 AEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGS---DAALLFVALYLIAT 138 (578)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~g~ 138 (578)
.+.++..+...++..++.+++|+++||+ |||++++++.++..++.++. ..++ +...+.++|++.|+
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~----------~~~~~~~~~~~~~~~R~~~G~ 114 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILI----------AFAPSYNNFWMLLIGRFLIGF 114 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccc----------ccccccccccccccccccccc
Confidence 4578899999999999999999999998 99999999999999887775 4445 88899999999999
Q ss_pred hccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccc---cCchhHHHHHHHHHHHHHHHH
Q 043156 139 GTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDN---KGWDRGFGLSSVAVFLATIIF 215 (578)
Q Consensus 139 g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~---~g~~~~f~i~~~~~~~~~~~~ 215 (578)
+.|+..+..+.++.|..|++. |++..++.+....+|..++..++..+.+. .+||..+.+.++..++..+..
T Consensus 115 ~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~ 188 (451)
T PF00083_consen 115 GIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLR 188 (451)
T ss_pred ccccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999987 99999999999999998887666544332 459999988777665443332
Q ss_pred HhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhcccCCCCC--ccchhhHhhhhccCc
Q 043156 216 AAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIETEFLPHRD--IFRFLDKAAIQKTST 293 (578)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 293 (578)
.+ .||+|+++..+++.+++++..++..+.+ +.+..+..+......
T Consensus 189 ~~---------------------------------~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 235 (451)
T PF00083_consen 189 FF---------------------------------LPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQ 235 (451)
T ss_pred cc---------------------------------cccccceeccccccccccccccccccccccccccccccccccccc
Confidence 22 2444555544444443333333321110 111101000000000
Q ss_pred cccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHH-HhhhccchhhhhhhccCCCCCCCceeeCCC-cccCchhH
Q 043156 294 ENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMT-LCLAQLQTFSIQQGLTMDTSVTTSFHIPPA-SLPILPIL 371 (578)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i 371 (578)
.....|+...+... .+++.+..+.+.+.+.... .....+.+.+..+. ..... .......+
T Consensus 236 ------~~~~~~~~l~~~~~-~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~-----------~~~~~~~~~~~~~~ 297 (451)
T PF00083_consen 236 ------ESKASWRDLFRNKK-YRKRLLIALLLQFFQQFSGINFIFYYSPSIFENA-----------GISNSFLATLILGL 297 (451)
T ss_pred ------ccceeeeecccccc-cccccccccccccccccccccccccccccccccc-----------cccccccccccccc
Confidence 00012222221111 1223322222222111111 11111111111111 11111 11112222
Q ss_pred HHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHH-HHHHHHHhhhhhcCccCCCCCCCCccchhhH
Q 043156 372 FMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAA-IFEVIRKDVARDHNMLDAIPVVQPLPISTFW 450 (578)
Q Consensus 372 ~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (578)
..++...+...+.|+++|| +.+..|.++++++++.++ ...... +.+...+...
T Consensus 298 ~~~~~~~~~~~~~~~~GRr-----------~~~i~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~ 351 (451)
T PF00083_consen 298 VNFLGTLLAIFLIDRFGRR-----------KLLIIGLLLMAICSLILGIIFFLGV---------------SSSSWWSILS 351 (451)
T ss_pred ccccccccccccccccccc-----------ccccccccccccccccccccccccc---------------cccccccccc
Confidence 2333333444677777777 345567777766666554 111000 0000112222
Q ss_pred HHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcch
Q 043156 451 LSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRNH 530 (578)
Q Consensus 451 ~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (578)
++...+........+.+..+.+..|.+|.+.|+++.|+......+++.+++.+.+.+.... +
T Consensus 352 i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~---------------~--- 413 (451)
T PF00083_consen 352 IVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNL---------------G--- 413 (451)
T ss_pred ceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccc---------------c---
Confidence 2222222233344567888899999999999999999999999999999888776654211 1
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcccccccccccc
Q 043156 531 LNLFFWLLSALSFINFSVYLFMSSRYNYRPQTSV 564 (578)
Q Consensus 531 ~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~ 564 (578)
....|++.+++++++.++.+++.+++++++.|+.
T Consensus 414 ~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei 447 (451)
T PF00083_consen 414 GWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEI 447 (451)
T ss_pred ccccchhhHHHHHHHHhheeEEEeeCCCCCHHHH
Confidence 1245778888888989999999999998887654
No 90
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.79 E-value=8.1e-17 Score=170.59 Aligned_cols=166 Identities=16% Similarity=0.118 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhc----cchhh-hhhhhhhhhccCC
Q 043156 33 AAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAF----IGRFK-AVLISGSVEFLPP 107 (578)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~----~Grr~-~~~~~~~~~~~~~ 107 (578)
...+.....+.....-+|.|+++ .|+|.+++|++...... .+..++.|+++||+ +|||| .+.++.++.++..
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~ 82 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASI 82 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHH
Confidence 34445555555566778999875 59999999999777665 68899999999996 16766 6777666665433
Q ss_pred cccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 043156 108 PCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTL 187 (578)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l 187 (578)
.++. ......+.+.+++..++.++..+...|+..+++.|++|+++ |+++.++...+.++|..+++.+
T Consensus 83 ~~l~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~~~~~~~~g~~~g~i~g~~l 149 (402)
T PRK11902 83 AAMA-------FCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGAGAAVKVLGYRLAMLVSGGL 149 (402)
T ss_pred HHHH-------hcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhHHHHHHHHHHHHHHHHHhHH
Confidence 3320 00112345556666667778888888999999999999887 9999999999999999999999
Q ss_pred HHHhccc-cCchhHHHHHHHHHHHHHHH
Q 043156 188 IVWIQDN-KGWDRGFGLSSVAVFLATII 214 (578)
Q Consensus 188 ~~~l~~~-~g~~~~f~i~~~~~~~~~~~ 214 (578)
++++.+. +|||..|++.++..++..+.
T Consensus 150 ~~~l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 150 ALWLADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 9998875 59999999988766554443
No 91
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.79 E-value=5.3e-17 Score=172.77 Aligned_cols=436 Identities=11% Similarity=0.034 Sum_probs=255.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhh----hccchhhhhhhh-h
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLAD----AFIGRFKAVLIS-G 100 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD----~~~Grr~~~~~~-~ 100 (578)
.+++.+....+..++++-...++++.|+ +++|.+....+.+.....+...+..|+.|+++| |+ ||||.++++ .
T Consensus 4 ~~li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~ 81 (477)
T TIGR01301 4 RKLLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGA 81 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHH
Confidence 3556677777778888887888888876 689999999999999999999999999999999 47 999998875 3
Q ss_pred hhhccCCcccccCCCCCcccc----cc---chhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHH
Q 043156 101 SVEFLPPPCNVFDPTAGCKKI----EG---SDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLL 173 (578)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~ 173 (578)
+...++.+++.+.+....... .. ......+++..+..++.....+...++++|.+|+++ ++++.++++.
T Consensus 82 ~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~----~~~~~a~~~~ 157 (477)
T TIGR01301 82 ALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDA----RRTRIANAYF 157 (477)
T ss_pred HHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchh----HHHHHHHHHH
Confidence 333333222211000000000 00 011334445555566777777888999999999886 1236899999
Q ss_pred HHHHHHHHHHHHHHHHHh--ccc-------------cCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHH
Q 043156 174 FLAVCIGGAISVTLIVWI--QDN-------------KGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQ 238 (578)
Q Consensus 174 ~~~~~lG~~~~p~l~~~l--~~~-------------~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (578)
..+.++|..+|+.++++. .+. .+.++.|++.+++.+++.+...+..++.+..++++ ..
T Consensus 158 ~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~-~~------ 230 (477)
T TIGR01301 158 SFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDD-FI------ 230 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCcccc-ch------
Confidence 999999999999998865 211 15688999988877777666555444332111110 00
Q ss_pred HHHHHHHhcccCCCCCchhhhhhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHH
Q 043156 239 VYVAAIRNRKLELPEDPMELYEINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKI 318 (578)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 318 (578)
++.++. .++.+.. ..++...+...+.-|.
T Consensus 231 -----------------~~~~~~------------~~~~~~~----------------------~~~~~i~~~~~~mP~~ 259 (477)
T TIGR01301 231 -----------------NSEAAP------------PSKHGEE----------------------AFFGELFGAFKYLPRP 259 (477)
T ss_pred -----------------hhhccc------------ccccchh----------------------hhHHHHHHHHHHCCHH
Confidence 000000 0000000 0000000011111233
Q ss_pred HHhHHHHHHHHHHHHHhhhccchhhhhh-hccCCCCCCCceeeC---CCcccCchhHHHHHHHHhhhhhhccccccccCC
Q 043156 319 ILGMIPIFCCTIVMTLCLAQLQTFSIQQ-GLTMDTSVTTSFHIP---PASLPILPILFMILAVPVYDRIFVPFAGKITGN 394 (578)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~ 394 (578)
+.+.+...++...-|..+..+.+.+.-+ ..+-+..-...++-. ..+-...+.+...+...+..++..++++|
T Consensus 260 m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~---- 335 (477)
T TIGR01301 260 VWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAG---- 335 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----
Confidence 3445555566666666666666544332 111111100000000 11112223333333333344443333321
Q ss_pred CCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHh--hhhhcCccCCCCCCCCccch-hhHHHHHHHHHHHHHHHHhhhhhh
Q 043156 395 PTGITHLQRVGVGLVLSCISMAIAAIFEVIRKD--VARDHNMLDAIPVVQPLPIS-TFWLSIQFFIFGIADMFTYVGLLE 471 (578)
Q Consensus 395 ~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~l~g~g~~~~~~~~~~ 471 (578)
...-.++.++.++|++...+......+ ..+.++.+- ..+.. .+..+..+.+.|+.....+...++
T Consensus 336 ------k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~~~Gi~~A~~~siPfa 403 (477)
T TIGR01301 336 ------KRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESL------PPPTGIKASALIVFAILGIPLAITYSIPFA 403 (477)
T ss_pred ------hhHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccc------CcchhhHHHHHHHHHHhhHHHHHHHHHhHH
Confidence 123367888888888887765421100 000011000 01112 366777888899999999999999
Q ss_pred eeeccCCc--hhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 043156 472 FFYSEAPK--GIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVY 549 (578)
Q Consensus 472 ~~~~~~P~--~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~ 549 (578)
++.+..|+ +..|.++|+.|++-.+...+.....+.+.+...+ +-...+.+.++..+++.+..
T Consensus 404 l~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~----------------~~~~~~~~~gv~~~~aa~~~ 467 (477)
T TIGR01301 404 LASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG----------------GNLPAFVVGAVAAFVSGLLA 467 (477)
T ss_pred HHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCC----------------CCeeHHHHHHHHHHHHHHHH
Confidence 99999995 4559999999999999999999877775432211 11256888899999999998
Q ss_pred hhhccccc
Q 043156 550 LFMSSRYN 557 (578)
Q Consensus 550 ~~~~~~~~ 557 (578)
++..+|.+
T Consensus 468 ~~~~~~~~ 475 (477)
T TIGR01301 468 LILLPRPR 475 (477)
T ss_pred HHhCCCCC
Confidence 88877654
No 92
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.77 E-value=6.1e-16 Score=167.00 Aligned_cols=388 Identities=12% Similarity=0.017 Sum_probs=220.7
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchh
Q 043156 47 VNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDA 126 (578)
Q Consensus 47 ~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (578)
.....++.+++|-+ ....|+.+...++..+..++.|+|+|.+ |||..++.+.++..+|.++. +.+.+.
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~----------atA~~~ 131 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVC----------ATAQNM 131 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHh----------hcCCcH
Confidence 34556889999965 5678899999999999999999999998 99999999999999998775 677899
Q ss_pred HHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHHHHHH
Q 043156 127 ALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGLSSV 206 (578)
Q Consensus 127 ~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i~~~ 206 (578)
..++++-.+.|+|.|.... ....++|..|.+. |..+..+......+....+|.++..+..+.+|||.|++.++
T Consensus 132 ~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~------R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i 204 (599)
T PF06609_consen 132 NTFIAGMVLYGVGAGVQEL-AALAISELVPNKW------RGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFII 204 (599)
T ss_pred HHHHHHHHHHHHhhHHHHH-HHHHHHHhcccch------hhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHH
Confidence 9999999999999877654 4556899999876 87777776666666666778887777766789999999988
Q ss_pred HHHHHHHHHHhcC-CCceec-CCCCcch---H--HHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhcccCCCCCc
Q 043156 207 AVFLATIIFAAGL-PLYRFQ-VVQGSSV---L--IEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIETEFLPHRDI 279 (578)
Q Consensus 207 ~~~~~~~~~~~~~-~~~~~~-~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (578)
...++++..+++. +..+.+ +.++.+. + .|..+.+......-....+-+ ..... ...+.+...
T Consensus 205 ~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~------wgG~~-----~~~W~Sa~V 273 (599)
T PF06609_consen 205 WSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLS------WGGYP-----YYPWKSAHV 273 (599)
T ss_pred HHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHh------ccCCC-----CCCCCCccc
Confidence 7666655444333 221111 1111011 1 233333333222000000000 00000 000111111
Q ss_pred cchhhH-----hhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccchhhhhhhccC-CCC
Q 043156 280 FRFLDK-----AAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQTFSIQQGLTM-DTS 353 (578)
Q Consensus 280 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 353 (578)
..-+-. .....-|.+.. ..+--.|++. .+++|.+ ... .....+..+.+.....++.++..++ +..
T Consensus 274 Ia~lviG~~~Lv~F~~wE~~~~-~~~Pl~P~~L-----f~~~r~~-~~~--lvi~fi~G~~~~s~~~l~p~~~~~vf~~d 344 (599)
T PF06609_consen 274 IAPLVIGFVLLVAFVVWEWFGA-PKDPLFPHRL-----FKDRRGF-AAL--LVISFISGMNFFSVNILWPQQVVNVFGSD 344 (599)
T ss_pred hhhHHHHHHHHHHHHHhhhhcc-CCCCcCCHHH-----hccchHH-HHH--HHHHHHHHHHHHHHHHHHHHHHhhhccCC
Confidence 111100 01000000000 0000023322 2222221 111 1122222233333333444433321 111
Q ss_pred CCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 043156 354 VTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHN 433 (578)
Q Consensus 354 ~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (578)
.. +. ...++......+.....+.+.+.+..+. || .++.+.+|.+++++++..++...
T Consensus 345 ~~-~~-~~~~~~s~~~~fg~~~g~~i~g~l~~~i-r~---------~Kw~li~~~~~~ta~~Gama~~~----------- 401 (599)
T PF06609_consen 345 PI-SI-TEIGWISSPVGFGSCAGAVILGLLFSKI-RH---------IKWQLIFGSVLMTAFCGAMAAVR----------- 401 (599)
T ss_pred Cc-cc-ceeehhhhhHHHHHHHHHHHHHHHHHHc-cc---------hhHHHHHHHHHHHHHHHHHHHcc-----------
Confidence 00 00 0123344445555555555566554322 22 22566778777776655554432
Q ss_pred ccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043156 434 MLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIV 507 (578)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~ 507 (578)
+.+.+.+ +...++.+++.+....+....+.-.+|++.-|+++|+....+.+|+.+|..+...+
T Consensus 402 ---------~~n~~~~--i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I 464 (599)
T PF06609_consen 402 ---------PDNKNAA--IAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAI 464 (599)
T ss_pred ---------CCCcchH--HHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 1111222 23346777888888877888888899999999999999999999999998776543
No 93
>PRK09848 glucuronide transporter; Provisional
Probab=99.75 E-value=3.3e-16 Score=168.35 Aligned_cols=361 Identities=11% Similarity=0.059 Sum_probs=202.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhc---cchhhhh-hhhhh
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAF---IGRFKAV-LISGS 101 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~Grr~~~-~~~~~ 101 (578)
+..+.-...++..++.+....++++.|+++.+|++..++|.+.+...+...+..|+.|+++||. +||||.+ .++.+
T Consensus 8 ~~~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~ 87 (448)
T PRK09848 8 RTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTA 87 (448)
T ss_pred HHHHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHH
Confidence 3444455577777888887888999999999999999999999999999999999999999994 2777754 44433
Q ss_pred hhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHH-----
Q 043156 102 VEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLA----- 176 (578)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~----- 176 (578)
...+...++. ...............++...+.+++.+...++..++..+..+..+ +|.+..++..++
T Consensus 88 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-----~r~~~~~~r~~~~~~~~ 159 (448)
T PRK09848 88 PLMIFSVLVF---WVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQ-----SRARLGAARGIAASLTF 159 (448)
T ss_pred HHHHHHHHHH---hCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHH-----HHHHHHHHHHHHHHHHH
Confidence 3332211110 000000111223334455566788888888888888888777644 377776665433
Q ss_pred HHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCch
Q 043156 177 VCIGGAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPM 256 (578)
Q Consensus 177 ~~lG~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (578)
.+++..++|.+.+.........+..+. .+..+++.+..++.....+.+.+.+ . +++
T Consensus 160 ~~~~~~~~p~i~~~~g~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~e~~~~~-~---------------------~~~- 215 (448)
T PRK09848 160 VCLAFLIGPSIKNSSPEEMVSVYHFWT-IVLAIAGMVLYFICFKSTRENVVRI-V---------------------AQP- 215 (448)
T ss_pred HHHHHHHHHHHHHhCCCchhhhHHHHH-HHHHHHHHHHHHHHHcCcEeccCCC-c---------------------cCC-
Confidence 456666777766644321111111111 1112222222222111111110000 0 000
Q ss_pred hhhhhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhh
Q 043156 257 ELYEINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCL 336 (578)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~ 336 (578)
...+. ++ +-.+ .|.+.... ....+.+..+
T Consensus 216 ------------------------~~~~~-------------------~~----~l~~-n~~f~~~~---~~~~~~~~~~ 244 (448)
T PRK09848 216 ------------------------SLKIS-------------------LQ----TLKR-NRPLFMLC---IGALCVLIST 244 (448)
T ss_pred ------------------------CHHHH-------------------HH----HHhC-CchHHHHH---HHHHHHHHHH
Confidence 00000 00 0001 11111111 1111112221
Q ss_pred hcc---chhhhhhhccCCCCCCCceeeCCCcccCch-hHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHH
Q 043156 337 AQL---QTFSIQQGLTMDTSVTTSFHIPPASLPILP-ILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSC 412 (578)
Q Consensus 337 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~ 412 (578)
... .+++.++..+.+. . .+.+...+ .+..++..|+.+++.+|+++| +.+.+|.++..
T Consensus 245 ~~~~~~~~~~~~~~~g~~~-------~-~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~-----------~~~~~g~~~~~ 305 (448)
T PRK09848 245 FAVSASSLFYVRYVLNDTG-------L-FTVLVLVQNLVGTVASAPLVPGMVARIGKK-----------NTFLIGALLGT 305 (448)
T ss_pred HHHhhhheeeEeeecCChH-------H-HHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----------HHHHHHHHHHH
Confidence 111 1222221111110 0 11121222 345666778888887776665 46677887777
Q ss_pred HHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCch-------hhHHH
Q 043156 413 ISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKG-------IKSLS 485 (578)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~-------~rg~~ 485 (578)
++.+.+.+.. ..+.+++....++.++|+++..+..+++..+..|++ .+|.+
T Consensus 306 i~~~~~~~~~----------------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~ 363 (448)
T PRK09848 306 CGYLLFFWVS----------------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLT 363 (448)
T ss_pred HHHHHHHHcC----------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHH
Confidence 7766655421 224455566678889999999999999999988765 46999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcc
Q 043156 486 TCFLWCSMALGYFFSTILVNIVNSA 510 (578)
Q Consensus 486 ~g~~~~~~~ig~~lg~~~~~~~~~~ 510 (578)
.|++++.+.+|..+++.+.+.+...
T Consensus 364 ~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 364 YSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998877643
No 94
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.75 E-value=2.8e-16 Score=172.21 Aligned_cols=140 Identities=15% Similarity=0.085 Sum_probs=125.1
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhHHHHHHHH
Q 043156 55 GVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALY 134 (578)
Q Consensus 55 ~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (578)
+..+.+........+++.++..+++++.|+++||+ |||++++.++++.+++.+.. +.+.++..+++.|+
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~----------a~a~~~~~~~~~Rf 179 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILT----------AFAPNYWMFLIFRF 179 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHH----------HHhCcHHHHHHHHH
Confidence 56677888999999999999999999999999997 99999999999988665554 67799999999999
Q ss_pred HHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHH
Q 043156 135 LIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGLSSVAVFLATII 214 (578)
Q Consensus 135 l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~ 214 (578)
+.|++.+....+...+++|++++++ |+.+.++ ......++.++|.+++++.. +||+.+++..+..++.++.
T Consensus 180 l~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 180 LSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL 250 (521)
T ss_pred HHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998 9999999 78888888888888888877 8999999988887766555
No 95
>PRK09669 putative symporter YagG; Provisional
Probab=99.74 E-value=3.5e-16 Score=167.92 Aligned_cols=363 Identities=11% Similarity=0.039 Sum_probs=209.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhh----ccchhhhhh-hh
Q 043156 25 IKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADA----FIGRFKAVL-IS 99 (578)
Q Consensus 25 ~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~----~~Grr~~~~-~~ 99 (578)
+|..+.-.+..+..+..+..+..+++.|+++++|+|..++|.+..+..+...+..|+.|+++|| + ||||-.+ ++
T Consensus 8 ~~~~~~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~-Grrrp~il~~ 86 (444)
T PRK09669 8 TKDKIGYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRH-GQFRPYLLWF 86 (444)
T ss_pred HHHHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCC-CCcchhHHHH
Confidence 3444444456667777777778899999999999999999999999999999999999999999 6 8865544 55
Q ss_pred hhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHH
Q 043156 100 GSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCI 179 (578)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~l 179 (578)
.+..++...++...| ..........+++..++.+++.........++.+|+.+..+ +|++..++.....++
T Consensus 87 ~~~~~i~~~l~f~~p----~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~-----eR~~l~~~r~~~~~~ 157 (444)
T PRK09669 87 AIPFGVVCLLTFYTP----DFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPR-----ERHSLQSWRFALSFI 157 (444)
T ss_pred HHHHHHHHHHHHhCC----CCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHH-----HHHHHHHHHHHHHHH
Confidence 454443332221000 00112234445555666666666777777899999886543 389888888888888
Q ss_pred HHHHHHHHHHHhcc-------ccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCC
Q 043156 180 GGAISVTLIVWIQD-------NKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELP 252 (578)
Q Consensus 180 G~~~~p~l~~~l~~-------~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (578)
|..+++.+...+.. ..+|+..+.+.+++..+..+..++..++.. +++++ ++
T Consensus 158 G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~-~~~~~-~~-------------------- 215 (444)
T PRK09669 158 GGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERY-TPEVD-NS-------------------- 215 (444)
T ss_pred HHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEec-CCCCc-CC--------------------
Confidence 88877765433321 246777777766665554443333222110 00000 00
Q ss_pred CCchhhhhhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHH
Q 043156 253 EDPMELYEINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVM 332 (578)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 332 (578)
....+.- +.....|.....+...+.....
T Consensus 216 ---------------------------~~~~~~~------------------------~~~~~n~~~~~l~~~~~~~~~~ 244 (444)
T PRK09669 216 ---------------------------SSVWKDL------------------------KLLLGNSQWRIMFIFNVVLLTA 244 (444)
T ss_pred ---------------------------CCHHHHH------------------------HHHhCCchHHHHHHHHHHHHHH
Confidence 0000000 0000011111111111111111
Q ss_pred HHhhhccchhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHH
Q 043156 333 TLCLAQLQTFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSC 412 (578)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~ 412 (578)
.........++..+. +... +. ...+.....+..++..++.+++.+|+++| +...++.++..
T Consensus 245 ~~~~~~~~~y~~~~~--~~~~-----~~-~~~~~~~~~i~~ii~~~~~~~l~~r~gk~-----------~~~~~~~~~~~ 305 (444)
T PRK09669 245 VVTRGGATLYYVNYV--LLRP-----DL-ATLFLVTGMIAGLFGALLSERLLGKFDRV-----------RAFKWTIVAFV 305 (444)
T ss_pred HHHHhhhhheeeeee--cCCH-----HH-HHHHHHHHHHHHHHHHHHHHHHHHHhChH-----------HHHHHHHHHHH
Confidence 111111111111111 1100 00 11222333455667778888888777666 34444554444
Q ss_pred HHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCC-------chhhHHH
Q 043156 413 ISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAP-------KGIKSLS 485 (578)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P-------~~~rg~~ 485 (578)
++.+...+.. +.+.+.+.+..++.+++.+...+..+++..+.++ ++..|..
T Consensus 306 ~~~~~~~~~~----------------------~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~ 363 (444)
T PRK09669 306 ILSALIFFIP----------------------PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLV 363 (444)
T ss_pred HHHHHHHHhC----------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHH
Confidence 3332222211 1234445556678899999999999999998886 4456788
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccc
Q 043156 486 TCFLWCSMALGYFFSTILVNIVNSAT 511 (578)
Q Consensus 486 ~g~~~~~~~ig~~lg~~~~~~~~~~~ 511 (578)
.++++++..+|..+|+.+.+.+.+..
T Consensus 364 ~s~~~~~~klg~alg~~i~g~ll~~~ 389 (444)
T PRK09669 364 FSTNLFAIKLGLAIGGAVVGWILAWV 389 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999998876433
No 96
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.74 E-value=2.2e-16 Score=164.13 Aligned_cols=153 Identities=12% Similarity=0.025 Sum_probs=131.1
Q ss_pred HHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccc
Q 043156 46 GVNLVTYFNGVLHLDLAE-AANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGS 124 (578)
Q Consensus 46 ~~~l~~yl~~~lg~s~~~-~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (578)
.+++..|+.+++|+|.++ .|.+.+.+..++.++.+++|+++||+ |-|+++.++.+.+.+..+++ ....
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~t~L~----------~fa~ 113 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCVWLLL----------LLGT 113 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHH----------HHHH
Confidence 466778999999999999 99999999999999999999999998 99999999999998665554 4456
Q ss_pred hhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHHHH
Q 043156 125 DAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGLS 204 (578)
Q Consensus 125 ~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i~ 204 (578)
+...+.+.|++.|++.|... +...++..++|+++ |+++.++.+.+.++|.++++++++++ ..+||++-+.+.
T Consensus 114 Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE------R~ratsi~~sg~~vG~~Ia~~L~qll-~s~gWr~y~~Ln 185 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR------YQRAAAYSRAAVLLGVFLSSVLGQLL-VTLGWISYSTLN 185 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCchhHHHHH
Confidence 78899999999999999999 99999999999987 99999999999999999999999995 467998766554
Q ss_pred HH---HHHHHHHHHHh
Q 043156 205 SV---AVFLATIIFAA 217 (578)
Q Consensus 205 ~~---~~~~~~~~~~~ 217 (578)
.+ ...+++++.++
T Consensus 186 ~Isl~s~~~a~~~a~~ 201 (511)
T TIGR00806 186 IISLVFMTFSVFLALF 201 (511)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 33 33444444333
No 97
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.74 E-value=2e-17 Score=165.04 Aligned_cols=150 Identities=16% Similarity=0.105 Sum_probs=134.9
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhHHHHHHHH
Q 043156 55 GVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALY 134 (578)
Q Consensus 55 ~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (578)
.+++-+.+++|++.+.+.+...+..|+.|.+.||+ |+|-.+++|++++...+++. +...++++++++|.
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilF----------afg~sy~~l~vAR~ 167 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILF----------AFGNSYPMLFVARS 167 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHH----------HHcchhHHHHHHHH
Confidence 34566778999999999999999999999999997 99999999999988776664 66788999999999
Q ss_pred HHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHH
Q 043156 135 LIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGLSSVAVFLATII 214 (578)
Q Consensus 135 l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~ 214 (578)
++|+|.+...++..++++|.||++. +|++++|+.-.+..+|-.+||..+|.+.+..|++.+|.+.+++.++-..+
T Consensus 168 LQgvgsA~~~tsglamlAd~f~~d~-----er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L 242 (464)
T KOG3764|consen 168 LQGVGSAFADTSGLAMLADVFPEDN-----ERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGAL 242 (464)
T ss_pred HhhhhHHHHHhhhHHHHHHHcccch-----hhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999887 59999999999999999999999999999999999999999988776655
Q ss_pred HHhcCC
Q 043156 215 FAAGLP 220 (578)
Q Consensus 215 ~~~~~~ 220 (578)
-++..+
T Consensus 243 ~l~vi~ 248 (464)
T KOG3764|consen 243 QLLVIE 248 (464)
T ss_pred HHheeC
Confidence 555443
No 98
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.74 E-value=5.9e-16 Score=165.41 Aligned_cols=356 Identities=13% Similarity=0.063 Sum_probs=232.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhh----hccchhhhhh-hhhhhhccCCcc
Q 043156 35 FGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLAD----AFIGRFKAVL-ISGSVEFLPPPC 109 (578)
Q Consensus 35 ~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD----~~~Grr~~~~-~~~~~~~~~~~~ 109 (578)
.+...+.+.....++..|+++.+|++....|.+.....+...+..|+.|+++| |+ ||||-++ ++.+..+++..+
T Consensus 10 ~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~l 88 (428)
T PF13347_consen 10 DLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFL 88 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHH
Confidence 45555566666678899999999999999999999999999999999999999 77 9877665 566666655444
Q ss_pred cccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 043156 110 NVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIV 189 (578)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~ 189 (578)
+... . +...........+.+..++..++......+..++..|..+.++ +|.+..++-.....+|..+...+.+
T Consensus 89 lf~~-~-p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~-----~R~~l~~~~~~~~~~g~~l~~~~~~ 161 (428)
T PF13347_consen 89 LFSP-P-PAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPD-----ERTRLSSWRMIFSMIGSLLASFLAP 161 (428)
T ss_pred hhcc-c-cchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHh-----hhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 3100 0 0000111123344666677788888888899999999998765 3999999988888888876666665
Q ss_pred Hhccc-------cCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhc
Q 043156 190 WIQDN-------KGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEIN 262 (578)
Q Consensus 190 ~l~~~-------~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (578)
.+.+. .+|++...+.+++.+++.++..+..|+...+.+++ ++
T Consensus 162 ~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~-~~------------------------------ 210 (428)
T PF13347_consen 162 ILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQ-EK------------------------------ 210 (428)
T ss_pred hhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeecccccccc-cc------------------------------
Confidence 54322 15888888877776666555554444310000000 00
Q ss_pred hhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccchh
Q 043156 263 MDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQTF 342 (578)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (578)
. .+++...++-.++ |.....+.........+........+
T Consensus 211 ----------------~-----------------------~~~~~~~~~~~~n-r~~~~l~~~~~~~~~~~~~~~~~~~y 250 (428)
T PF13347_consen 211 ----------------K-----------------------ISLRDSLRSLFRN-RPFRILLLAFFLQWLAFALMNTFLPY 250 (428)
T ss_pred ----------------c-----------------------cccccchhhhccc-chHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 0 0000000000111 22222222222222222222222223
Q ss_pred hhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHH
Q 043156 343 SIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFE 422 (578)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~ 422 (578)
+..+..+.+ ...+.+.....+..++..|+.+++.+|+++| +.+..+.++..++.++..+..
T Consensus 251 ~~~~vl~~~--------~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~-----------~~~~~~~~~~~~~~~~~~~~~ 311 (428)
T PF13347_consen 251 YFTYVLGNE--------GLISIFMLIFFVASIVGSPLWGRLSKRFGKK-----------KVYIIGLLLAALGFLLLFFLG 311 (428)
T ss_pred HHHHHhcCc--------hhhHHHHHHHHHHHHHHHHHHHHHHHHccce-----------eehhhhHHHHHHHHHHHHHHH
Confidence 333222211 1123444566778888999999999888777 456778888888887776654
Q ss_pred HHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCc-------hhhHHHHHHHHHHHHH
Q 043156 423 VIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPK-------GIKSLSTCFLWCSMAL 495 (578)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~-------~~rg~~~g~~~~~~~i 495 (578)
..+.+++.+..++.+++.+......+++..+..+. +..|...|++++...+
T Consensus 312 ----------------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~ 369 (428)
T PF13347_consen 312 ----------------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKI 369 (428)
T ss_pred ----------------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHH
Confidence 13677888888999999999999999999998873 5579999999999999
Q ss_pred HHHHHHHHHHhhhcc
Q 043156 496 GYFFSTILVNIVNSA 510 (578)
Q Consensus 496 g~~lg~~~~~~~~~~ 510 (578)
+..++..+.+.+...
T Consensus 370 ~~~la~~i~g~~l~~ 384 (428)
T PF13347_consen 370 GQGLAGAIVGLLLAL 384 (428)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999998877643
No 99
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.73 E-value=1.4e-15 Score=164.66 Aligned_cols=368 Identities=10% Similarity=0.023 Sum_probs=213.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhh----hccchhh-hhhhhhhh
Q 043156 28 SLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLAD----AFIGRFK-AVLISGSV 102 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD----~~~Grr~-~~~~~~~~ 102 (578)
-+.-.+..+..++.+..+.++++.|+++.+|++...+|.+.....+...+..|+.|+++| |+ |||| .++++.+.
T Consensus 8 ~~~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~ 86 (473)
T PRK10429 8 KLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLA 86 (473)
T ss_pred HHhhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHH
Confidence 334456677778888888899999999999999999999999999999999999999999 76 9955 44456555
Q ss_pred hccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHH
Q 043156 103 EFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGA 182 (578)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~ 182 (578)
.+++..++.. .. ..........+++..++..++.........+++.|+.+..+ +|.+..++-....++|+.
T Consensus 87 ~~i~~~llf~---~p-~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~-----eR~~l~~~~~~~~~ig~~ 157 (473)
T PRK10429 87 NSVVLFLLFS---AH-LFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKR-----EREQLVPYPRFFASLAGF 157 (473)
T ss_pred HHHHHHHHHc---CC-CCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHH-----HHHHHHHHHHHHHHHHHH
Confidence 5544333210 00 00111123344455566678888888888999999986443 399999987777788766
Q ss_pred HHHHHHHHhcc-------ccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCc
Q 043156 183 ISVTLIVWIQD-------NKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDP 255 (578)
Q Consensus 183 ~~p~l~~~l~~-------~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (578)
+.+.+...+.. ..+|+....+.+++.+++.+..++..++.... +.. .+ +++
T Consensus 158 ~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~-~~~-~~-------------------~~~- 215 (473)
T PRK10429 158 VTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSS-DNQ-VS-------------------AEG- 215 (473)
T ss_pred HHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCc-ccc-cc-------------------ccc-
Confidence 66555443211 12466655555555444443333322221100 000 00 000
Q ss_pred hhhhhhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHh
Q 043156 256 MELYEINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLC 335 (578)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~ 335 (578)
+. .+++...+.-.++ |.+...+............
T Consensus 216 ----------------------~~-----------------------~~~~~~~~~~~~n-~~~~~ll~~~~~~~~~~~~ 249 (473)
T PRK10429 216 ----------------------SH-----------------------LTLKDIVALIYKN-DQLSCLLGMALAYNIASNI 249 (473)
T ss_pred ----------------------cC-----------------------CCHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHH
Confidence 00 0000000000011 2222222211111111122
Q ss_pred hhccchhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHH
Q 043156 336 LAQLQTFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISM 415 (578)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~ 415 (578)
......++..+... +. ...+.+.....+..++..|+.+++.+|+++| +.+.++.++..++.
T Consensus 250 ~~~~~~y~~~y~~~-~~-------~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk-----------~~~~~~~~~~~~~~ 310 (473)
T PRK10429 250 INGFAIYYFTYVIG-DA-------DLFPYYLSYAGAANLVTLILFPRLVKSLSRR-----------ILWAGASIFPVLSC 310 (473)
T ss_pred HhhheeeEEEEECC-CH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----------HHHHHHHHHHHHHH
Confidence 22222222221111 00 0112334445577788888899988877776 34555665555454
Q ss_pred HHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCC-------chhhHHHHHH
Q 043156 416 AIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAP-------KGIKSLSTCF 488 (578)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P-------~~~rg~~~g~ 488 (578)
+....... ..+.+.+.+++..++.+++.+...+..+++..+.++ ++..|...|.
T Consensus 311 ~~~~~~~~-------------------~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~ 371 (473)
T PRK10429 311 GVLLLMGL-------------------AAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSV 371 (473)
T ss_pred HHHHHHhc-------------------cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHH
Confidence 44332210 001234455556677888999888888899999877 4556779999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccc
Q 043156 489 LWCSMALGYFFSTILVNIVNSAT 511 (578)
Q Consensus 489 ~~~~~~ig~~lg~~~~~~~~~~~ 511 (578)
+.+..-++..+++.+.+.+....
T Consensus 372 ~~~~~K~~~al~~~i~g~~l~~~ 394 (473)
T PRK10429 372 QTMVVKGGSAFAAFFIGVVLGLI 394 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999998876433
No 100
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.73 E-value=3e-15 Score=157.89 Aligned_cols=177 Identities=12% Similarity=-0.039 Sum_probs=119.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH--HHHHHHHHHHHHhHH-HHHhhhccchhhhhhhhhhhhc
Q 043156 28 SLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQ--VTNYMGTSYILSIVV-ALLADAFIGRFKAVLISGSVEF 104 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~--~~~~~~~~~~~~~~~-G~laD~~~Grr~~~~~~~~~~~ 104 (578)
...+....+...+.+....+.+|.|++ +.|.|.++.|.. .+.......+..|+. ++.+||+ ||||.+++.+.+..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence 455666777788887878899998886 569999999997 456677777777766 6689997 99999755543221
Q ss_pred c-CCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHH
Q 043156 105 L-PPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAI 183 (578)
Q Consensus 105 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~ 183 (578)
. ..... .... ........++....+.++..+...+...++..|..++++ ++...+....+..+|..+
T Consensus 81 ~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~------~~~~~~~~~~g~~lG~~~ 148 (390)
T TIGR02718 81 SACLASL-----ALVG-PDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT------LAKGNAVQIAGVMIGFFG 148 (390)
T ss_pred HHHHHHH-----HcCC-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hhHHHHHHHHHHHHHHHH
Confidence 0 00000 0000 111112223333444555556666666667777776664 677777788888999999
Q ss_pred HHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhc
Q 043156 184 SVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAG 218 (578)
Q Consensus 184 ~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~ 218 (578)
|+.+.+++.+++|||..|++.++..++..+..++.
T Consensus 149 g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~ 183 (390)
T TIGR02718 149 GGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWL 183 (390)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 99888999998999999999888766655554443
No 101
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.71 E-value=5.4e-15 Score=145.87 Aligned_cols=426 Identities=15% Similarity=0.078 Sum_probs=241.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCC
Q 043156 37 FENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTA 116 (578)
Q Consensus 37 ~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~ 116 (578)
++-....+....+..-++...|.+.-+...+......+..++.-..|.++|++ ||||.+.+...+..+...+
T Consensus 88 mad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~i------- 159 (528)
T KOG0253|consen 88 MADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVI------- 159 (528)
T ss_pred HHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHh-------
Confidence 33334444455566677788898889999999999999999999999999998 9999998887766633223
Q ss_pred CccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccC
Q 043156 117 GCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKG 196 (578)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g 196 (578)
...++++..+++.|.+.++|.|+ .|...++-.|..|..+ |...+-.. ....+|.++...+.-....++|
T Consensus 160 ---s~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~------r~~~~V~~-~~waig~v~ea~law~vm~~~g 228 (528)
T KOG0253|consen 160 ---SGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH------RWLLTVMS-FFWAIGQVFEALLAWGVMSNFG 228 (528)
T ss_pred ---hcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC------CCcchhHH-HHHHHHHHHHHHHHHHHHHhhh
Confidence 25678999999999999999999 8999999999999887 88877666 8889999999888877778889
Q ss_pred chhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhcccCCC
Q 043156 197 WDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIETEFLPH 276 (578)
Q Consensus 197 ~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (578)
|||..+.......+.+.+..+..+..+...-++ ++.+.+..+-+-|..|+.. +|.-..+...+.+.++++.+
T Consensus 229 wr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G-~~~kAletL~kiArmNg~q-lplgvl~~s~~~~~e~e~~~------ 300 (528)
T KOG0253|consen 229 WRYLLFTSSTPLMFAARFLVWVYESPRFYLAKG-DDYKALETLHKIARMNGKQ-LPLGVLESSAIDRQEQEESD------ 300 (528)
T ss_pred HHHHHHHHHhHHHHHHHHHhhcccCcchhhhcC-ChHHHHHHHHHHHHhcCCC-CCcceeeeehhhhhhhhhhc------
Confidence 999988888766666655555544333222222 2322222222233333332 22211111111111111111
Q ss_pred CCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccchhhhhhh---------
Q 043156 277 RDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQTFSIQQG--------- 347 (578)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 347 (578)
+++.+.+.. .+.+....+.. ...-||+.+..+..++....-|.......+-+.+..
T Consensus 301 ------~~~~~~~a~-------ke~rg~~~nLl--sp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~ 365 (528)
T KOG0253|consen 301 ------LDDSKSSAA-------KEVRGGTTNLL--SPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRF 365 (528)
T ss_pred ------hhhhhhccc-------cccccchHhhc--ChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhc
Confidence 011100000 00001100000 112244444444333332221111111111111100
Q ss_pred --ccCCCCCCCceeeCC-CcccC--chhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHH
Q 043156 348 --LTMDTSVTTSFHIPP-ASLPI--LPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFE 422 (578)
Q Consensus 348 --~~~~~~~~~~~~~~~-~~~~~--~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~ 422 (578)
..++... ...... .-+.. +..+.-.-+.-+...++||++|| +.+...++++++..+.+..-.
T Consensus 366 ~p~e~e~~~--~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRK-----------kTMal~l~~f~iflfll~~c~ 432 (528)
T KOG0253|consen 366 LPTELETRA--NCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRK-----------KTMALSLILFGIFLFLLTTCK 432 (528)
T ss_pred chhHHHhhh--cCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcch-----------hHHHHHHHHHHHHHHHHHHhc
Confidence 0000000 000000 00000 00111111122345577888888 457777777777766554422
Q ss_pred HHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHH
Q 043156 423 VIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTI 502 (578)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~ 502 (578)
.......++ +..-.+. ....-..|.|.-|..|+..|+++.|....+.++|+++.|.
T Consensus 433 --------------------~rn~~tvll---f~arafi-sg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~ 488 (528)
T KOG0253|consen 433 --------------------TRNAYTVLL---FTARAFI-SGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPV 488 (528)
T ss_pred --------------------CcchhHHHH---HHHHHHH-hchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhH
Confidence 011122222 2222332 2335667899999999999999999999999999999998
Q ss_pred HHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhccccccccc
Q 043156 503 LVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYNYRPQ 561 (578)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~ 561 (578)
+. .... ....+ .-.+.+++++++.+..+++=.+.++++.
T Consensus 489 iA-~~~e-------~s~sl------------~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 489 IA-MRAE-------LSTSL------------PIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred HH-HHhc-------cceee------------hHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 87 3321 11122 2556777888888888887666666543
No 102
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.71 E-value=1.9e-16 Score=170.51 Aligned_cols=427 Identities=11% Similarity=0.027 Sum_probs=264.1
Q ss_pred hHHHHHHHHHHHHHHHHHH---HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhc
Q 043156 28 SLLILAAFGFENLATIALG---VNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEF 104 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~---~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~ 104 (578)
-|.++++.|+.+...+++. ..+-..++++++-+..+++|+.++......+..|+.+.+.||+ |.|++.+.|.++.+
T Consensus 44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~ 122 (509)
T KOG2504|consen 44 GWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAA 122 (509)
T ss_pred eeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHH
Confidence 5677777777777777764 2345677889999999999999999999999999999999998 99999999999999
Q ss_pred cCCcccccCCCCCccccccchhHHHHH-HHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHH
Q 043156 105 LPPPCNVFDPTAGCKKIEGSDAALLFV-ALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAI 183 (578)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~ 183 (578)
.|.++. .++.+.+.+++ .=++.|+|.|+.+.....+++.+|+++ |+.+.|+...+..+|..+
T Consensus 123 ~g~~ls----------sF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kk-------R~lA~Gia~~GsG~G~~~ 185 (509)
T KOG2504|consen 123 LGLLLS----------SFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKK-------RALATGIAVSGTGVGTVV 185 (509)
T ss_pred HHHHHH----------HHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHH-------HHHHHhhhhccCCcceee
Confidence 887664 45566665554 445579999999999999999888865 999999999999999999
Q ss_pred HHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhch
Q 043156 184 SVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINM 263 (578)
Q Consensus 184 ~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (578)
=|.+..++.+.+|||..+++.+.+.+-..+.....++.....++..+..... + ....+...
T Consensus 186 ~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~----------------~---~~~~~~~~ 246 (509)
T KOG2504|consen 186 FPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRN----------------S---AASVESTP 246 (509)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhcc----------------c---cccccccc
Confidence 9999999999999999999988777655555555444222111111000000 0 00000000
Q ss_pred hh-hhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccc-hhhhhHHHHHhHHHHHHHHHHHHHhhhccch
Q 043156 264 DK-EAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRV-TQVENAKIILGMIPIFCCTIVMTLCLAQLQT 341 (578)
Q Consensus 264 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~ 341 (578)
.+ +.....++.++.. ....+....+.... .....+-+.... .+.+-.|. ...+.+..........+.....
T Consensus 247 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~d~~ll~~-~~fl~~~~~~~~~~~g~~~p~~ 319 (509)
T KOG2504|consen 247 KPVELRISERDSGLKK-LSLSNLATLKRGPD-----KWRNSPLQAFLSMLDLSLLKD-PKFLLLALSNLFAYLGFNVPFV 319 (509)
T ss_pred cccccccccCCCCCCc-ccccchhhhhhCCc-----cccccchhhhhhhhhHHHHcC-chHHHHHHHHHHHHHHHHHHHH
Confidence 00 0000000000000 00000000000000 000000000000 00011111 0111111111111111111111
Q ss_pred hhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHH
Q 043156 342 FSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIF 421 (578)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~ 421 (578)
++..+.. +..+. ....+.+..+..+..+++-++.+.+.|+-..+ ......+++++.+++.+.+.+.
T Consensus 320 ~l~~~~~--~~g~~---~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~---------~~~~~~~~ll~~gl~~~~~p~~ 385 (509)
T KOG2504|consen 320 YLPSYAK--SLGLS---SNDAAFLLSIIGVSDIIGRIILGLLADKPGIR---------ALVLFLLTLLIAGLARLFLPFA 385 (509)
T ss_pred HHHHHHh--hcCCC---hhhhHHHHHHHHHhhhhhhhhhhhhcCccccc---------hHHHHHHHHHHHHHHHHHHHHh
Confidence 2222211 11111 12233455556677777777888887654422 2345566777777777665554
Q ss_pred HHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHH
Q 043156 422 EVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFST 501 (578)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~ 501 (578)
. +.+.++...+++|+..+...........++.+.+.-..+.|+..+++.++..+|+
T Consensus 386 ~------------------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gp 441 (509)
T KOG2504|consen 386 T------------------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGP 441 (509)
T ss_pred c------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCc
Confidence 3 5567777778889988887777777888999999999999999999999999999
Q ss_pred HHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhc
Q 043156 502 ILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMS 553 (578)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~ 553 (578)
.+.+.+.+.+ ++|+..|...++..+++.++.++..
T Consensus 442 Piag~~~d~t-----------------g~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 442 PIAGLLYDIT-----------------GNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred ccceeeeecc-----------------CCeeeehhhcChHHHHHHHHHHHhH
Confidence 9988666433 2366789999999999888877776
No 103
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.70 E-value=4.4e-16 Score=154.63 Aligned_cols=121 Identities=15% Similarity=0.024 Sum_probs=103.4
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhHHHHHHHH
Q 043156 55 GVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALY 134 (578)
Q Consensus 55 ~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (578)
++.+.+..-+|.+-+.|.+...+.++..|.+|||+ |||.++++|++..++...+. +.+.++..++++|+
T Consensus 61 ~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~----------~~S~~F~afv~aR~ 129 (451)
T KOG2615|consen 61 EPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLW----------ALSRNFAAFVLARF 129 (451)
T ss_pred CcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHH
Confidence 33444556789999999999999999999999998 99999999988877644343 55677777777899
Q ss_pred HHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcc
Q 043156 135 LIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQD 193 (578)
Q Consensus 135 l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~ 193 (578)
+.|+..|-. ..+.++++|.+++++ |+.+++....+..+|.++||+++|++.+
T Consensus 130 l~Gi~kgnl-~v~rAiisdV~sek~------r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 130 LGGIFKGNL-SVIRAIISDVVSEKY------RPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred hhhhccCch-HHHHHHHHhhcChhh------ccceeeeeehhhhcchhhcchhhhHHHh
Confidence 999988754 455899999999988 9999999999999999999999999987
No 104
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.67 E-value=1.1e-15 Score=155.34 Aligned_cols=402 Identities=11% Similarity=0.028 Sum_probs=213.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHH
Q 043156 59 LDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIAT 138 (578)
Q Consensus 59 ~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 138 (578)
+++...+.+.....++..+++++.|+++||+ |||+++...++++.+++++.. .+.+-..-..-...+...|+++|+
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~---~s~~~~~~~~~m~~L~~~R~~LGi 156 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSG---LSVGTTSPLGVMMTLCFFRFLLGI 156 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhc---cCCCCCCCcchhhHHHHHHHHhhc
Confidence 5667789999999999999999999999998 999999999999887765431 111111111235678899999999
Q ss_pred hccccccccccccccCCCCCChHHHhhhhhHHHHHHHH----HHHHHHHHHHHHHHhccc-----------cCchhHHHH
Q 043156 139 GTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLA----VCIGGAISVTLIVWIQDN-----------KGWDRGFGL 203 (578)
Q Consensus 139 g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~----~~lG~~~~p~l~~~l~~~-----------~g~~~~f~i 203 (578)
|.|+-+|...++.+|...++. |+...+..... .-.|++++-++.+.+... .=||..|.+
T Consensus 157 GIGGDYPlSAtI~SE~an~~~------RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~gl 230 (538)
T KOG0252|consen 157 GIGGDYPLSATIMSESANKKT------RGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGL 230 (538)
T ss_pred cccCCCcchHHHhhhhhhhcc------ccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHH
Confidence 999999999999999988875 88887764444 444444443333333211 128887777
Q ss_pred HHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhcccCCCCCccchh
Q 043156 204 SSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIETEFLPHRDIFRFL 283 (578)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (578)
.++..+..+..-+.+ |+. .++. +...+ +.+.+..+..+..+. .+
T Consensus 231 g~vpa~~~ly~Rl~M--------~Et-~~Y~--------al~~~---------------~~~~a~~d~~k~~~~----~~ 274 (538)
T KOG0252|consen 231 GAVPALLVLYFRLKM--------PET-ARYT--------ALVSK---------------KLKQAAGDMKKVLSV----DI 274 (538)
T ss_pred HHHHHHHHHHhhhcC--------Ccc-hhHH--------HHhhc---------------CHhhhhhcccccccc----cc
Confidence 655443332221111 111 1111 00000 000000111111110 00
Q ss_pred hHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhh-ccchhhhhhhccCCCCCCCceeeCC
Q 043156 284 DKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLA-QLQTFSIQQGLTMDTSVTTSFHIPP 362 (578)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (578)
+.++..... ...+..+..+ ......+. ...........|.++- ...+.-..+....+ +++ +.-..
T Consensus 275 ~~~~~~~~~------~~~~~~~~~~---F~~~f~~~--hg~~Llgt~~~WFllDiafy~~nL~~s~I~~-~ig--~~~~~ 340 (538)
T KOG0252|consen 275 EAESTAESD------VPPPSNSFGL---FSRLFLRW--HGKHLLGTAGTWFLLDIAFYGQNLFQSVIFS-AIG--VIPSA 340 (538)
T ss_pred chhhccccC------CCCcccccch---HHHHHHHH--HHHHHHHHHHHHHhhhhhhhccccHHHHHHH-hhc--cCCCc
Confidence 000000000 0000111000 00111111 1111122222333321 11111111111111 111 00000
Q ss_pred CcccCc------hhHHHHH----HHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhc
Q 043156 363 ASLPIL------PILFMIL----AVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDH 432 (578)
Q Consensus 363 ~~~~~~------~~i~~il----~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (578)
...... +.+.... +-++...++|.++|| +..+.|++++++-++.++....+
T Consensus 341 ~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk-----------~iq~~GF~~~~i~~~~~~~~y~~-------- 401 (538)
T KOG0252|consen 341 NTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRK-----------YIQLMGFFIMTIFFFVIAGPYNQ-------- 401 (538)
T ss_pred chHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhH-----------HHHHhhHHHHHHHHHHHcCCccc--------
Confidence 111011 1111111 223344566666766 45677999999888887775411
Q ss_pred CccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 043156 433 NMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATR 512 (578)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~ 512 (578)
.......++..-+...+++-....+...+..|.+|.+.||++-|++..+.-.|+.++........+
T Consensus 402 -----------~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~--- 467 (538)
T KOG0252|consen 402 -----------LENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTD--- 467 (538)
T ss_pred -----------ccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhh---
Confidence 010111222222333344444555666677899999999999999999999999999988776652
Q ss_pred CccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccccccccc
Q 043156 513 GITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYNYRPQTSV 564 (578)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~ 564 (578)
+ ++. ...++.+.|+.++.+++++.++.+++- +.++++.|+.
T Consensus 468 ---~--~yp-----~~~g~~~v~~i~~~~~~~gi~~T~l~p-Etk~~~leei 508 (538)
T KOG0252|consen 468 ---H--NYP-----PNIGVRNVFIILAGCMLLGILFTLLIP-ETKGKSLEEI 508 (538)
T ss_pred ---c--cCC-----ccccchHHHHHHHHHHHHhHheeEEee-cccccCHHHh
Confidence 0 111 113456789999999999999888875 7777665443
No 105
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.66 E-value=2.5e-14 Score=154.19 Aligned_cols=381 Identities=14% Similarity=0.065 Sum_probs=218.2
Q ss_pred CchhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccc-----hhhhhh
Q 043156 24 GIKTSLL-ILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIG-----RFKAVL 97 (578)
Q Consensus 24 ~~r~~~~-l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G-----rr~~~~ 97 (578)
+++..+. +....+...+. +.+...++.++++++|+|.++.+...+...+...+-.+ .|.++||+ + ||+.++
T Consensus 23 ~~~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~ 99 (468)
T TIGR00788 23 HPRVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLV 99 (468)
T ss_pred CcchHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHH
Confidence 3555444 44466677777 77777888899999999999999999998888888666 99999998 8 777777
Q ss_pred hhhhhhc-cCCcccccCCCCCccccccch-hHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHH
Q 043156 98 ISGSVEF-LPPPCNVFDPTAGCKKIEGSD-AALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFL 175 (578)
Q Consensus 98 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~ 175 (578)
++.++.. .....+ ....+ .....+.+++.+++.+....+.-+++.|..+ ++. +.++...++.+.
T Consensus 100 ~~~~l~~~~~~~~l----------~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~---~~~~~~~s~~~~ 165 (468)
T TIGR00788 100 LSGLLGSAILYGLL----------PGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESP---SAGPSLVSWMWG 165 (468)
T ss_pred HHHHHHHHHHHHhc----------ccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCC---CcCCCeeeHHHH
Confidence 7776652 221111 11222 3333447788899999999999999999999 431 123345556667
Q ss_pred HHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCc
Q 043156 176 AVCIGGAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDP 255 (578)
Q Consensus 176 ~~~lG~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (578)
..++|..+|+.++|++.+.++|+..|++.+...++..+...+..++.....|+. ...
T Consensus 166 ~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~-~~~---------------------- 222 (468)
T TIGR00788 166 ASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRI-GTY---------------------- 222 (468)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhcccccccccccc-ccc----------------------
Confidence 778999999999999999899999999988776666444343322210001110 000
Q ss_pred hhhhhhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHh
Q 043156 256 MELYEINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLC 335 (578)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~ 335 (578)
....+... .....+..+.... ..| + .-..+.+...+.+ ....+..
T Consensus 223 ~~~~~~~~---------------~~~~~~~~~~~~~-----------~l~-----~-~l~~~~i~~~l~f---ifl~~~~ 267 (468)
T TIGR00788 223 LEMNMALL---------------TLGVLANVKVQIL-----------GLR-----G-AIQLLEIAKPLIF---IFLSYAN 267 (468)
T ss_pred chhhhhhh---------------hhhHHHHHHHHHH-----------HHH-----H-HHhcHHHHHHHHH---HHHHHhh
Confidence 00000000 0000000000000 000 0 0001111111111 1110111
Q ss_pred hhccc-hhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHH
Q 043156 336 LAQLQ-TFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCIS 414 (578)
Q Consensus 336 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~ 414 (578)
..... +.+..+.. . ++ .-....+.+.....+..+++..+.+++. +|. +..+.+.++.++..++
T Consensus 268 ~~~~~~~~f~~~~~--~--lG-~s~~~~G~~~~~~~v~~i~g~~~~~~~~----~~~-------~~r~~l~~~~~l~~~~ 331 (468)
T TIGR00788 268 LPGASGSVFCATTQ--C--LP-GGPSFSGMSKVVGNLGSLCGVGGYDRFL----KTF-------PYRLLFGVTTLLYTLS 331 (468)
T ss_pred cCCCCceeEEEEcc--c--CC-CCcchhhhHHHHHHHHHHHHHHHHHHHH----hhC-------CHHHHHHHHHHHHHHH
Confidence 11111 11111111 1 11 0122234444445566666666666664 332 3335566677666666
Q ss_pred HHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHH
Q 043156 415 MAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMA 494 (578)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ 494 (578)
.+....... +-+. ..+ ..+.+++....++.+++.++...+...++.+.+|++.+|+..++.+..++
T Consensus 332 ~~~~~~l~~-~~~~--~~g-----------i~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~ 397 (468)
T TIGR00788 332 SLFDLILVK-RWNL--AFG-----------ISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILH 397 (468)
T ss_pred HhCceeeee-cccc--ccC-----------CCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHH
Confidence 544321110 0000 000 01223444455777888888888889999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhc
Q 043156 495 LGYFFSTILVNIVNS 509 (578)
Q Consensus 495 ig~~lg~~~~~~~~~ 509 (578)
+|..+++.+.+.+.+
T Consensus 398 lg~~v~~~~gg~l~~ 412 (468)
T TIGR00788 398 LGSSVSGFLGVLLME 412 (468)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999988887764
No 106
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.66 E-value=2.3e-14 Score=144.39 Aligned_cols=155 Identities=17% Similarity=0.180 Sum_probs=127.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhc
Q 043156 25 IKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEF 104 (578)
Q Consensus 25 ~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~ 104 (578)
+|.-.+++..-|+..-........+.+.+++.++++..+++.+...+..++.++.++.|++.+|+ |+|+.++.|+.+++
T Consensus 11 ~~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~a 89 (422)
T COG0738 11 VKLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYA 89 (422)
T ss_pred ceeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHH
Confidence 44444444444444333344556677889999999999999999999999999999999999998 99999999999999
Q ss_pred cCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHH
Q 043156 105 LPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAIS 184 (578)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~ 184 (578)
++..+. .+-+...++..++.+.++.+.|.+...++.+++++...|+++ -.+-+++.+....+|++++
T Consensus 90 vg~~lF-------~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~------a~~rlnl~q~fn~lGa~~g 156 (422)
T COG0738 90 VGAALF-------WPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPES------AAFRLNLAQAFNGLGAILG 156 (422)
T ss_pred HHHHHH-------hhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh------HHHHHHHHHHhhhhHHHHH
Confidence 886663 112345678889999999999999999999999999999876 5677888889999999999
Q ss_pred HHHHHHhcc
Q 043156 185 VTLIVWIQD 193 (578)
Q Consensus 185 p~l~~~l~~ 193 (578)
|.+++++..
T Consensus 157 p~~g~~lil 165 (422)
T COG0738 157 PLLGSSLIL 165 (422)
T ss_pred HHHHHHHHH
Confidence 999988765
No 107
>PRK11462 putative transporter; Provisional
Probab=99.64 E-value=1.1e-13 Score=149.17 Aligned_cols=183 Identities=13% Similarity=0.103 Sum_probs=126.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhc---cchhhhhh-hhh
Q 043156 25 IKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAF---IGRFKAVL-ISG 100 (578)
Q Consensus 25 ~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~Grr~~~~-~~~ 100 (578)
+|.-+.-....+..+..+..+..++..|+++.+|++...+|.+..+.-+.-.+.-|+.|+++||. +||||-.+ ++.
T Consensus 8 ~~~k~~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~ 87 (460)
T PRK11462 8 VKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGA 87 (460)
T ss_pred HhHHHhhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHH
Confidence 33444445667777777777788999999999999999999999999999999999999999962 39987665 454
Q ss_pred hhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHH
Q 043156 101 SVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIG 180 (578)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG 180 (578)
+..++...++...| . .........+.+...+..++.........++.+|+.+..+ +|++..++...+.++|
T Consensus 88 i~~~i~~~llf~~p---~-~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~-----eRt~l~s~r~~~~~iG 158 (460)
T PRK11462 88 LPFGIVCVLAYSTP---D-LSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPT-----QRISLQSWRFVLATAG 158 (460)
T ss_pred HHHHHHHHHHHhCC---C-CCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHH-----HHHHHHHHHHHHHHHH
Confidence 55554433321000 0 0111123334555666678888888888899999998654 4999999999999998
Q ss_pred HHHHHHHHHHhccc-------cCchhHHHHHHHHHHHHHHHHH
Q 043156 181 GAISVTLIVWIQDN-------KGWDRGFGLSSVAVFLATIIFA 216 (578)
Q Consensus 181 ~~~~p~l~~~l~~~-------~g~~~~f~i~~~~~~~~~~~~~ 216 (578)
..+++.+...+... .+|+....+.+++..++.++.+
T Consensus 159 ~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~ 201 (460)
T PRK11462 159 GMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCF 201 (460)
T ss_pred HHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 88887765443322 2466655555555444443333
No 108
>PTZ00207 hypothetical protein; Provisional
Probab=99.64 E-value=1.4e-13 Score=149.69 Aligned_cols=176 Identities=11% Similarity=0.022 Sum_probs=126.1
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhh
Q 043156 24 GIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVE 103 (578)
Q Consensus 24 ~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~ 103 (578)
+|......++...+.... |+.. .....+++++|+|+.+.+++.+... ....+.+++|+++||+ |||+++.++.+++
T Consensus 26 Rw~~lva~~~~~~~~g~~-y~fs-v~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~-G~R~vllig~ll~ 101 (591)
T PTZ00207 26 RFALLVLGAFCSICTSFM-YAFN-LISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYL-GPRPIFVLSMTVF 101 (591)
T ss_pred hHHHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHh-CcHHHHHHHHHHH
Confidence 344444444444444333 3333 3445789999999999999987744 3445677889999998 9999999999999
Q ss_pred ccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHH
Q 043156 104 FLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAI 183 (578)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~ 183 (578)
.++.++..+ ........+.+.+++.|++.|+|.+...+.....+.++|| ++ |+++.++...+.++|+++
T Consensus 102 ~iG~ll~al----a~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~------RG~a~Gi~~~~~gLGsaI 170 (591)
T PTZ00207 102 CLGTLLFAL----TFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SN------RGAVVAIMKTFTGLGSAI 170 (591)
T ss_pred HHHHHHHHH----HhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hh------hHHHHHHHHHHHHHHHHH
Confidence 987665410 0000112578889999999999999888888888999998 33 999999999999999975
Q ss_pred -HHHHHHHhccccCchhHHHHHHHHHHHHHHHHH
Q 043156 184 -SVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFA 216 (578)
Q Consensus 184 -~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~ 216 (578)
+++..+++. .+|+..|++.++..++..++.+
T Consensus 171 ~~~l~~~l~~--~~~~~~fl~l~vl~~vv~ll~~ 202 (591)
T PTZ00207 171 LGSIQLAFFS--DNTSAYFFFLMSFALVVGILAI 202 (591)
T ss_pred HHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHH
Confidence 555555554 3577777777766554444333
No 109
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.62 E-value=1.9e-13 Score=135.89 Aligned_cols=369 Identities=15% Similarity=0.141 Sum_probs=247.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCccc
Q 043156 31 ILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCN 110 (578)
Q Consensus 31 l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~ 110 (578)
+.++.+--+...-++ ..+..-+++++|+|.+.+|.+.+...++..+..+++.+++.|+ |-+|.+.+++++.++|.++=
T Consensus 17 Ivlia~NLR~~itsv-gPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~~iR 94 (395)
T COG2807 17 IVLIAFNLRPAITSV-GPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGILIR 94 (395)
T ss_pred HHHHHhccchhhhhh-hhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHHHHH
Confidence 333333344444433 3345678999999999999999999999999999999999998 99999999999988775552
Q ss_pred ccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 043156 111 VFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVW 190 (578)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~ 190 (578)
...+...++.+-.+.|.|.+......+.++.+.||++. +..+++|....++|+++++.+...
T Consensus 95 -----------~~~~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~-------~~mtglYs~sl~~~aaLaa~lavp 156 (395)
T COG2807 95 -----------SLGGLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRV-------GLMTGLYSTSLGAGAALAAALAVP 156 (395)
T ss_pred -----------hcccHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccch-------hhHHhHHHHHHHHHHHHHhhhhhH
Confidence 22366778899999999999999999999999999874 999999999999999999999998
Q ss_pred hcccc-CchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhh
Q 043156 191 IQDNK-GWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAI 269 (578)
Q Consensus 191 l~~~~-g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (578)
+.++. |||.....-+...+++++.++.-..|.+....+.
T Consensus 157 la~~~~gW~~aL~~WAl~allAl~~WlPq~~r~~~~~~~~---------------------------------------- 196 (395)
T COG2807 157 LAQHSGGWRGALGFWALLALLALLIWLPQALREQAASIAT---------------------------------------- 196 (395)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHHHhhhccccccccccc----------------------------------------
Confidence 88876 7999998888888887776654321111000000
Q ss_pred hcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccchhhhhhhcc
Q 043156 270 ETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQTFSIQQGLT 349 (578)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (578)
+.+ .+..-|+ +.......+.+-.....+|..+.+++.++.++..
T Consensus 197 -----------------~~~----------~~~~vw~--------~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~- 240 (395)
T COG2807 197 -----------------KLV----------SVRKVWR--------SPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGL- 240 (395)
T ss_pred -----------------ccc----------ccccccc--------CchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC-
Confidence 000 0001222 1111112222334456677777888877776633
Q ss_pred CCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhh
Q 043156 350 MDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVA 429 (578)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~ 429 (578)
+.+ ..+.+..+..+..+...-+...+..|.. +.........+++.++++.+.+...
T Consensus 241 -sa~-------~aG~llsl~~l~~~~~~ll~P~la~R~~----------n~r~~~~~~~~~~l~G~~G~~~~P~------ 296 (395)
T COG2807 241 -SAA-------EAGSLLSLMQLAQLPTALLIPLLARRSK----------NQRPLVVLALLLMLVGLVGLLLAPG------ 296 (395)
T ss_pred -CHH-------HhhhHHHHHHHHHHHHHHHHHHHHHHhc----------ccchHHHHHHHHHHHHHHHHHHhhh------
Confidence 221 2334444444444444444455554322 2224555666777777766665441
Q ss_pred hhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCc-hhhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 043156 430 RDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPK-GIKSLSTCFLWCSMALGYFFSTILVNIVN 508 (578)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~-~~rg~~~g~~~~~~~ig~~lg~~~~~~~~ 508 (578)
+..++| .+++|+|.+...|...+++..-+.+ +..+...|+.+....+=..+||.++|.+.
T Consensus 297 ---------------~~~~lw----~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lh 357 (395)
T COG2807 297 ---------------QLPILW----ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLH 357 (395)
T ss_pred ---------------hHHHHH----HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHH
Confidence 223334 3778999999888888887765544 44556677777777777888999999998
Q ss_pred ccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhccc
Q 043156 509 SATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSR 555 (578)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~ 555 (578)
+.+ ++|+..+..++...++..++-+...|+
T Consensus 358 Da~-----------------gsw~~~~~~l~~~~i~m~i~Gl~a~r~ 387 (395)
T COG2807 358 DAT-----------------GSWSAPLVLLALATLLMLIFGLRAGRN 387 (395)
T ss_pred Hhc-----------------CChHHHHHHHHHHHHHHHHHHhhcchh
Confidence 644 234445666666666666665555543
No 110
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.62 E-value=1.5e-14 Score=149.67 Aligned_cols=393 Identities=10% Similarity=0.011 Sum_probs=222.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhc-
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEF- 104 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~- 104 (578)
+..+.+....++..+++-...++++.+++++.|+|.+++|.+.+...+...+.+|+.|.++||. |.||-++..+.+..
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~~ 85 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILLL 85 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHHH
Confidence 4566666666666666666679999999999999999999999999999999999999999997 98887655443322
Q ss_pred -cC-CcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHH
Q 043156 105 -LP-PPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGA 182 (578)
Q Consensus 105 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~ 182 (578)
.+ .+..+ +......+ +.++.++.++..+....+... +.|.+-++.. ++.+-=+|-...-..+|.+
T Consensus 86 l~~pff~~v------~~pll~~n---~~lg~iig~i~l~~~f~~~~~-~~Ea~~er~s---r~~~feYG~~R~wGSig~a 152 (412)
T PF01306_consen 86 LFGPFFIYV------FGPLLQSN---FWLGAIIGGIYLGLVFNAGVP-LSEAYAERVS---RRNGFEYGRARMWGSIGFA 152 (412)
T ss_dssp TCHHHHHHT------HHHHHHTT----HHHHHHTTTTTTTTTTTHHH-HHHHHHHHHH---HHHSS-HHHHHHHHHHHHH
T ss_pred HHHHHHHHH------HHHHHHHH---HHHHHHHHHHHHHHHHcccch-HHHHHHHHHH---HHhcCCcchHHHHhhHHHH
Confidence 11 11100 00000111 223333334444443333333 2244443321 1233344557778899999
Q ss_pred HHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhc
Q 043156 183 ISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEIN 262 (578)
Q Consensus 183 ~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (578)
++..++|++.+ .+-+..|++.....++..++.+..++....+.+.. +.. +
T Consensus 153 i~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~-----------------------~~~----~-- 202 (412)
T PF01306_consen 153 IASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVA-----------------------DAL----G-- 202 (412)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SS-----------------------TTS----S--
T ss_pred HHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhh-----------------------ccc----c--
Confidence 99999999876 45678888876655444444444332211110000 000 0
Q ss_pred hhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccch-
Q 043156 263 MDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQT- 341 (578)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~- 341 (578)
.+. .+.+..+...+...|+....+.+.......|..+.|..+
T Consensus 203 --------------~~~-----------------------~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~ 245 (412)
T PF01306_consen 203 --------------AKK-----------------------DKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPI 245 (412)
T ss_dssp --------------S-----------------------------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------cCC-----------------------CCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 000000000011112333333344444445555544333
Q ss_pred hhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHH
Q 043156 342 FSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIF 421 (578)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~ 421 (578)
++..... +...+ +...+.+.++..+.=.+...+..++.+|.+.| +.+.++..++++=.+.+++.
T Consensus 246 y~~~~f~--~~~~g---~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k-----------~~Lllag~i~~iRi~~~~~~ 309 (412)
T PF01306_consen 246 YFASFFQ--SAGQG---NQMYGYLWSVQVFLEALMMFFSPWLINRIGAK-----------NLLLLAGVIMAIRIIGSGFA 309 (412)
T ss_dssp HHHHTSS--SHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----------HHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHhc--ccccC---hhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH-----------hHHHHHHHHHHHHHHHHhhh
Confidence 3322211 11111 01122333444444455555566666666666 45666666666666666664
Q ss_pred HHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHH-HHHHHHHHHHHH
Q 043156 422 EVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCF-LWCSMALGYFFS 500 (578)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~-~~~~~~ig~~lg 500 (578)
+ +++++++.=.+.++-..+......-|+.+.+|++..++...+ .+++.++|..+.
T Consensus 310 ~------------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~ 365 (412)
T PF01306_consen 310 T------------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIIL 365 (412)
T ss_dssp -------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHH
T ss_pred c------------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHH
Confidence 4 677777777888888888899999999999999999888887 478889999999
Q ss_pred HHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhccccc
Q 043156 501 TILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYN 557 (578)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~ 557 (578)
+.+.|.+.+ +-+++..|++.+.+.++..++..+..++.+
T Consensus 366 s~~~G~lyd------------------~~G~~~tylimg~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 366 SPLAGYLYD------------------RIGFQHTYLIMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp HHHHHHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred hhhHHhhHh------------------hcCcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence 999888763 235667788888888877777777766544
No 111
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.61 E-value=5.5e-14 Score=150.14 Aligned_cols=151 Identities=15% Similarity=0.082 Sum_probs=127.3
Q ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhHHHHHHH
Q 043156 54 NGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVAL 133 (578)
Q Consensus 54 ~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (578)
.++++....+.+.+.+.|.+++.++.+++|+|.||+ .-.+.+....+.+.+-.++. ....+.+.+++.|
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~----------~~~~s~~~~ialr 141 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLT----------AAVHSFPGLIALR 141 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHH----------HHHhhhHHHHHHH
Confidence 367888999999999999999999999999999998 87777777766666322221 2256888999999
Q ss_pred HHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhc------cccCchhHHHHHHHH
Q 043156 134 YLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQ------DNKGWDRGFGLSSVA 207 (578)
Q Consensus 134 ~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~------~~~g~~~~f~i~~~~ 207 (578)
++.|+.++..+|+...+++.+|.+++ |+..+++++....+|.++|.+++..+. ...||||.|.+.+++
T Consensus 142 ~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i 215 (495)
T KOG2533|consen 142 FLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVI 215 (495)
T ss_pred HHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHH
Confidence 99999999999999999999999987 999999999999999999999987752 346899999999988
Q ss_pred HHHHHHHHHhcCCC
Q 043156 208 VFLATIIFAAGLPL 221 (578)
Q Consensus 208 ~~~~~~~~~~~~~~ 221 (578)
.+...++.++..+.
T Consensus 216 ~~~~gi~~f~~lp~ 229 (495)
T KOG2533|consen 216 TLVLGIVVFFFLPD 229 (495)
T ss_pred HHHHHheEEEEecC
Confidence 77766665555443
No 112
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.60 E-value=3.6e-13 Score=141.62 Aligned_cols=387 Identities=11% Similarity=0.042 Sum_probs=203.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCccc
Q 043156 31 ILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCN 110 (578)
Q Consensus 31 l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~ 110 (578)
+....++..+.+-...++++.|+++ .|+|.+|+|.+.+...+...+.+++.|+++||...+||.+.+..++.++..+..
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 3344455555555566899999975 689999999999999999999999999999998446777766655554322221
Q ss_pred ccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHH-HH
Q 043156 111 VFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTL-IV 189 (578)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l-~~ 189 (578)
....+++.+++..++..+......|...++.-+.... +++-+|-...-..+|-+++... ++
T Consensus 86 ----------~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--------~~~~YG~iRlwGSiGf~~~~~~~~~ 147 (400)
T PF03825_consen 86 ----------AFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--------RGKDYGRIRLWGSIGFIVAALAFGG 147 (400)
T ss_pred ----------HHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--------ccCCCCcchhhhhHHHHHHHHHHHH
Confidence 2234555566666666666666666665555555442 3444555555556666555333 22
Q ss_pred Hhcccc---CchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhh
Q 043156 190 WIQDNK---GWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKE 266 (578)
Q Consensus 190 ~l~~~~---g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (578)
++.... +....+++.+...++.....+. .++.+.++..+ +. . +
T Consensus 148 ~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~-lp~~~~~~~~~-~~----------------------~----~------ 193 (400)
T PF03825_consen 148 LLGGYLGISGTSLIFYIAAILSLLLAGFALF-LPKTPPKRSAK-ES----------------------V----K------ 193 (400)
T ss_pred HHHhhhccccccHHHHHHHHHHHHHHHHHHh-CCCCccccccC-CC----------------------c----c------
Confidence 332222 2334556655443332222222 22222110000 00 0 0
Q ss_pred hhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccchhhhhh
Q 043156 267 AAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQTFSIQQ 346 (578)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (578)
+.... +.++ -.++++-+...+..+..+.. ...+..+.+.+.++
T Consensus 194 ------------~~~~~-------------------~~~~-----llk~~~~~~Fll~~~l~~~~-~~~~~~f~~~yl~~ 236 (400)
T PF03825_consen 194 ------------KLLGL-------------------DALK-----LLKNPRFLVFLLAAFLIGIS-HAAYYTFFSIYLQE 236 (400)
T ss_pred ------------cccch-------------------HHHH-----HhcCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 00000 0000 00111111111111111111 11222222222222
Q ss_pred hccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHH
Q 043156 347 GLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRK 426 (578)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~ 426 (578)
...... ...+..+++..+.=+.+..+.+++ .+|. +..+.+.++.+...+=..+.+...
T Consensus 237 ~gg~~~-------~~~g~~~~l~~~aEi~~f~~~~~~----~~r~-------g~~~ll~~a~~~~~vR~~l~a~~~---- 294 (400)
T PF03825_consen 237 LGGYSG-------STIGILWALGVVAEIPFFFFSGRF----LKRF-------GIKWLLLLALVAYAVRWLLYAYFS---- 294 (400)
T ss_pred cccchh-------hHHHHHHHHHHHHHHHHHHHHHHH----HHhc-------CHHHHHHHHHHHHHHHHHHHHHhc----
Confidence 111000 011122222223223333334444 4443 333566667766666665555542
Q ss_pred hhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHH-HHHHHHHHHHHHH
Q 043156 427 DVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCS-MALGYFFSTILVN 505 (578)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~-~~ig~~lg~~~~~ 505 (578)
++.......+.+..++.|+..++.......++.+.+|++.|++++++++.. .++|..+|+.+.|
T Consensus 295 ---------------~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG 359 (400)
T PF03825_consen 295 ---------------DPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGG 359 (400)
T ss_pred ---------------CCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 000111122233345789999999999999999999999999999998765 6799999999999
Q ss_pred hhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccc
Q 043156 506 IVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRY 556 (578)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~ 556 (578)
.+.+.... + .--.+...|.+.+++.++..++++++.|+.
T Consensus 360 ~l~~~~g~----------~--~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 360 WLYDAFGA----------R--GMFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHhcc----------h--hhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 88742200 0 001234466777777777777777775543
No 113
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.56 E-value=2.9e-12 Score=137.43 Aligned_cols=403 Identities=13% Similarity=0.070 Sum_probs=220.7
Q ss_pred chhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcC----------------------------CC-HHHHHHHHHHHHHH
Q 043156 25 IKTSLLILAAFGFEN-LATIALGVNLVTYFNGVLH----------------------------LD-LAEAANQVTNYMGT 74 (578)
Q Consensus 25 ~r~~~~l~~~~~~~~-~~~~~~~~~l~~yl~~~lg----------------------------~s-~~~~~~~~~~~~~~ 74 (578)
+|+++...+-.+.++ +....+..+.|.|+++... .+ .+..+...++..+.
T Consensus 3 r~~i~~W~lyd~ans~f~~~i~t~~~p~~~~~~a~~~g~~~~~~~~~c~~~~~~c~~~~~g~~~~~~s~~~~~~sis~l~ 82 (477)
T PF11700_consen 3 RREIWSWALYDWANSPFATVIVTFFFPPYFQSLAREAGVLPGDPTQPCSDSDDDCVVPFFGSWIDTSSLWLYANSISGLL 82 (477)
T ss_pred hhHHHHHHHhHhhcccchhhhHHHHHHHHHHHHHHhcccccccccCcccccCCccccccccccccHhHHHHHHHHHHHHH
Confidence 456666666666654 3445556778888887641 11 22346778888889
Q ss_pred HHHHHhHHHHHhhhccchhhhhhhhhhhhc-cCCcccccCCCCCccccccchhHHHHHHHHHHHHhcccccccccccccc
Q 043156 75 SYILSIVVALLADAFIGRFKAVLISGSVEF-LPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGAD 153 (578)
Q Consensus 75 ~~~~~~~~G~laD~~~Grr~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~ 153 (578)
..+..|+-|-++|+- |+||-++....+.. +...++ ......+.....+..++..++.+.......+++.|
T Consensus 83 ~all~P~lGa~aD~~-~~Rk~~l~~~~~~~~~~~~~l--------~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP~ 153 (477)
T PF11700_consen 83 QALLAPFLGAIADYG-GRRKRFLLIFTLLGVLATALL--------WFVSPGQWWLALVLFIIANVGYEASNVFYNAYLPD 153 (477)
T ss_pred HHHHHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHH--------HHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 999999999999997 88887776554444 222221 11122333333344444556666667778899999
Q ss_pred CCCCCChHHHhh---------------------hhhHHHHHHHHHHHHHHHHHHHHHHhcc--------ccCchhHHHHH
Q 043156 154 QFDEKDPIEARQ---------------------MSSFFNLLFLAVCIGGAISVTLIVWIQD--------NKGWDRGFGLS 204 (578)
Q Consensus 154 ~~~~~~~~~~~~---------------------R~~~~~~~~~~~~lG~~~~p~l~~~l~~--------~~g~~~~f~i~ 204 (578)
+.++++. +++. |++..+.-+...++|+++.-.+.-.+.. ..+.|..+.+.
T Consensus 154 la~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~ 232 (477)
T PF11700_consen 154 LARPEPR-VRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIV 232 (477)
T ss_pred hcCCChh-hhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHH
Confidence 9988751 0000 2788888777888888887666544321 12347777777
Q ss_pred HHHHHHHHH-HHHhcCCCce-ecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhcccCCCCCccch
Q 043156 205 SVAVFLATI-IFAAGLPLYR-FQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIETEFLPHRDIFRF 282 (578)
Q Consensus 205 ~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (578)
++..++..+ .+++.+++.+ +..|...+.+..-.+-+.
T Consensus 233 a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~----------------------------------------- 271 (477)
T PF11700_consen 233 ALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLW----------------------------------------- 271 (477)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHH-----------------------------------------
Confidence 666443333 3333333221 111111011100000000
Q ss_pred hhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccc---hhhhhhhccCCCCCCCcee
Q 043156 283 LDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQ---TFSIQQGLTMDTSVTTSFH 359 (578)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 359 (578)
+..++.|+......+.+...++.-...... ..+.....+++.
T Consensus 272 ----------------------------~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~------- 316 (477)
T PF11700_consen 272 ----------------------------RTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMST------- 316 (477)
T ss_pred ----------------------------HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCH-------
Confidence 001111111111111111111111111111 122222112221
Q ss_pred eCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCC
Q 043156 360 IPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIP 439 (578)
Q Consensus 360 ~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (578)
.....+..+..+..+++..+.+++.+|++.|. .+.+.+++++..+ ..+.+...... + ..|
T Consensus 317 ~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~---------~~~l~~~l~~~~~-i~~~g~~G~~~-~---~~g------ 376 (477)
T PF11700_consen 317 TQLIVFGLVVQIVAIIGALLFGWLQDRFGPKT---------KRTLLISLILWII-IPLYGLFGFWP-S---FFG------ 376 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch---------hHHHHHHHHHHHH-HHHHHHHHhhh-c---ccC------
Confidence 11112333445666677777777776666551 0222223322211 11112210000 0 000
Q ss_pred CCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCC
Q 043156 440 VVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGG 519 (578)
Q Consensus 440 ~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~ 519 (578)
..+.+.+.+.-++.|+..+..++..-++..++.|++..+...|++.+.....+.+||.+.+.+.+.|
T Consensus 377 -----~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~t-------- 443 (477)
T PF11700_consen 377 -----LKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDAT-------- 443 (477)
T ss_pred -----cccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------
Confidence 1133334444567889999999999999999999999999999999999999999999999988655
Q ss_pred CcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhccc
Q 043156 520 WLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSR 555 (578)
Q Consensus 520 ~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~ 555 (578)
++.++.+..+.++.++++++.+.+..+
T Consensus 444 ---------g~~r~g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 444 ---------GSQRYGFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred ---------CCchhHHHHHHHHHHHHHHHHhhccch
Confidence 234577888999999999888666443
No 114
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.50 E-value=3.4e-13 Score=142.45 Aligned_cols=178 Identities=13% Similarity=0.050 Sum_probs=133.5
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhh
Q 043156 22 HGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGS 101 (578)
Q Consensus 22 ~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 101 (578)
++++|..+..+...+.....++....+.|.|+++++|++..+.+.+.+...++..++.+++|+++||+ ||||.+.++.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~ 290 (393)
T PRK15011 212 RRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAV 290 (393)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHH
Confidence 34555544444444444445555567788999999999999999998888888888999999999998 99998877655
Q ss_pred hhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHH
Q 043156 102 VEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGG 181 (578)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~ 181 (578)
...+..... ....+...+++.+++.+++.|...+....+..|.+|++ |+++.++++...++|.
T Consensus 291 ~~~~~~~~~----------~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~-------~g~~~~~~~~~~~lg~ 353 (393)
T PRK15011 291 AGVCFYAGM----------LMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ-------AGSATTLYTNTSRVGW 353 (393)
T ss_pred HHHHHHHHH----------HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-------cchHHHHHHHHHHHHH
Confidence 444221111 12234555666777777777766666667788988853 7999999999999999
Q ss_pred HHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHh
Q 043156 182 AISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAA 217 (578)
Q Consensus 182 ~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~ 217 (578)
.++|.++|++.+++||+..|++.+++.+++++..+.
T Consensus 354 ~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 354 IIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999889999999888777777666554
No 115
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.48 E-value=1.2e-11 Score=129.51 Aligned_cols=365 Identities=11% Similarity=0.054 Sum_probs=228.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhc---cchhhhh-hhhh
Q 043156 25 IKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAF---IGRFKAV-LISG 100 (578)
Q Consensus 25 ~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~Grr~~~-~~~~ 100 (578)
.|+-..-....+..++.+-.+..++..|+++..|++...+|.+..+.-+.-.+.-|+.|.++||. +||+|-. +++.
T Consensus 11 ~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ 90 (467)
T COG2211 11 LKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGA 90 (467)
T ss_pred HHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHh
Confidence 45555566678888888888899999999999999999999999999999999999999999974 2776644 4554
Q ss_pred hhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHH
Q 043156 101 SVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIG 180 (578)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG 180 (578)
+.+++...++..+|. ........-.++-..+.++++.+......++.+|+.+..+ +|.+..++-..+.++|
T Consensus 91 ip~~i~~~l~F~~p~----~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~-----ER~~l~s~R~~~~~~g 161 (467)
T COG2211 91 IPFAIVAVLLFITPD----FSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQ-----ERASLTSWRMVFASLG 161 (467)
T ss_pred HHHHHHHHHHHcCCC----cccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHH-----HHHHHHHHHHHHHHHH
Confidence 555543333311111 0112334445566777889999999999999999998765 4999999999999999
Q ss_pred HHHHHHHHHHhcc-------ccCchhHHHHHHHHHHHHHHHHHhcCC-CceecCCCCcchHHHHHHHHHHHHHhcccCCC
Q 043156 181 GAISVTLIVWIQD-------NKGWDRGFGLSSVAVFLATIIFAAGLP-LYRFQVVQGSSVLIEIIQVYVAAIRNRKLELP 252 (578)
Q Consensus 181 ~~~~p~l~~~l~~-------~~g~~~~f~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (578)
..+...+.+.+.. ..||+..-.+.+++..+..++.++..+ |..+..+.+ +.
T Consensus 162 ~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~-~~-------------------- 220 (467)
T COG2211 162 GLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTK-TG-------------------- 220 (467)
T ss_pred HHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCc-cc--------------------
Confidence 7766665544432 346776666666655555544443322 221111111 00
Q ss_pred CCchhhhhhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHH
Q 043156 253 EDPMELYEINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVM 332 (578)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 332 (578)
.. .++++.. ......|.++..+...+ ++
T Consensus 221 -------------------------~~-----------------------~~~~~~~-~~~~~Nrp~~~~l~~~l---~~ 248 (467)
T COG2211 221 -------------------------VK-----------------------LKLKDSF-LLIFKNRPLLLLLLMNL---LL 248 (467)
T ss_pred -------------------------cc-----------------------ccHHHHH-HHHHccchHHHHHHHHH---HH
Confidence 00 0000000 00001122222222222 22
Q ss_pred HHhhhccchhhhhhhc-cCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHH
Q 043156 333 TLCLAQLQTFSIQQGL-TMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLS 411 (578)
Q Consensus 333 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~ 411 (578)
+...+...+...++.. ++++. +..+...........++..++..++..+++|| +...+|.++.
T Consensus 249 ~~~~~i~~s~~~yy~~y~lg~~-----~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk-----------~~~~~~~~~~ 312 (467)
T COG2211 249 FIAFNIRGSIMVYYVTYVLGDP-----ELFAYLLLLASGAGLLIGLILWPRLVKKFGKK-----------KLFLIGLLLL 312 (467)
T ss_pred HHHHHHHhhhhheeEEEEcCCh-----HHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH-----------HHHHHHHHHH
Confidence 2222222222222111 12211 12222333334455555577888887777777 4677788888
Q ss_pred HHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccC-------CchhhHH
Q 043156 412 CISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEA-------PKGIKSL 484 (578)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~-------P~~~rg~ 484 (578)
.++.+.+.+.. ..+.++.++..++.++|.+...+..+++..+.+ -++..|.
T Consensus 313 ~i~~~~~~f~~----------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi 370 (467)
T COG2211 313 AVGYLLLYFTP----------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGI 370 (467)
T ss_pred HHHHHHHHhhc----------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhh
Confidence 87777766643 234556666668888999999999999998864 4566788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhc
Q 043156 485 STCFLWCSMALGYFFSTILVNIVNS 509 (578)
Q Consensus 485 ~~g~~~~~~~ig~~lg~~~~~~~~~ 509 (578)
.-+...+++=+|..++..+.+.+..
T Consensus 371 ~~s~~tF~~K~g~ala~~~~g~~L~ 395 (467)
T COG2211 371 VYSGMTFFRKLGLALAGFIPGWILG 395 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999888763
No 116
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.47 E-value=5.4e-13 Score=145.08 Aligned_cols=182 Identities=16% Similarity=0.137 Sum_probs=133.0
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhh
Q 043156 23 GGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSV 102 (578)
Q Consensus 23 ~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~ 102 (578)
++++.........++....+|++..++|.|+++.+|++..+.+.......++..++.+++|+++||+ |||+++.++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~ 325 (490)
T PRK10642 247 KHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVA 325 (490)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHH
Confidence 3455555455555667788899999999999999999998888888888889999999999999998 999998887654
Q ss_pred hccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHH
Q 043156 103 EFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGA 182 (578)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~ 182 (578)
..+..... .......+...+++++++.+++.+...+....++.|.+|++. |++++++.+....+++.
T Consensus 326 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~------Rg~~~g~~~~~~~~~g~ 392 (490)
T PRK10642 326 LFVLAIPA-------FILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI------RYSALAAAFNISVLVAG 392 (490)
T ss_pred HHHHHHHH-------HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc------chHHHHHHHHHHHHHHH
Confidence 33221110 000122345667778888887777666677788889999987 99999985555667778
Q ss_pred HHHHHHHHhcccc-CchhHHHHHHHHHHHHHHHHHhc
Q 043156 183 ISVTLIVWIQDNK-GWDRGFGLSSVAVFLATIIFAAG 218 (578)
Q Consensus 183 ~~p~l~~~l~~~~-g~~~~f~i~~~~~~~~~~~~~~~ 218 (578)
++|.+.+++.+.. +|+.++++..+..+++++..++.
T Consensus 393 ~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 429 (490)
T PRK10642 393 LTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTM 429 (490)
T ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 8999999987754 47777766555555555544443
No 117
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.44 E-value=1.6e-11 Score=125.16 Aligned_cols=375 Identities=16% Similarity=0.095 Sum_probs=220.0
Q ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccc-----hhhhhh-hhhhhhccCCcccccCCCCCccccc----
Q 043156 53 FNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIG-----RFKAVL-ISGSVEFLPPPCNVFDPTAGCKKIE---- 122 (578)
Q Consensus 53 l~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G-----rr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---- 122 (578)
+..|++++..-.+.+++...+... ..+..|+.||+. + ||.-++ .|..+++.+..+..+ .......
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~---a~~~l~~~~~~ 80 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPF---ALLLLAESGQQ 80 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHH---HHHHHcccccc
Confidence 456899999999999999888776 578889999997 6 554443 444444432222110 0000011
Q ss_pred ---cc--hhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCc
Q 043156 123 ---GS--DAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGW 197 (578)
Q Consensus 123 ---~~--~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~ 197 (578)
.. ......+...+.|+|.+...++..++++|..|+++ |++..++.+.+.-+|.+++..+.+.+.+.++-
T Consensus 81 ~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~------R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~ 154 (403)
T PF03209_consen 81 SSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER------RPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSP 154 (403)
T ss_pred cccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh------hhhhHHHHHHHHHHHHHHHHHHHHHHccccCH
Confidence 11 22234455556788888888899999999999987 99999999999999999999999999887764
Q ss_pred hhHHHHH---HH-HHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhccc
Q 043156 198 DRGFGLS---SV-AVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIETEF 273 (578)
Q Consensus 198 ~~~f~i~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (578)
.....+. ++ ..++..+..+-..++.++..+.. +
T Consensus 155 ~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~-----------------------~-------------------- 191 (403)
T PF03209_consen 155 ERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAA-----------------------E-------------------- 191 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCC-----------------------C--------------------
Confidence 3332222 22 22233333332222222211000 0
Q ss_pred CCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccchhhhhhhccCCCC
Q 043156 274 LPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQTFSIQQGLTMDTS 353 (578)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (578)
.++..+.+..... ..+ .+.+++ ...++.....+++.-....++= ..-...+
T Consensus 192 ---~~~~~f~~a~~~~-------------------~~~--~~a~~f--~~fl~l~t~a~~~QD~iLEPyg---g~Vfgms 242 (403)
T PF03209_consen 192 ---RPRPPFREAWRQV-------------------WAS--PQARRF--FVFLFLGTLAFFMQDVILEPYG---GEVFGMS 242 (403)
T ss_pred ---CCCccHHHHHHHH-------------------HhC--CChhHH--HHHHHHHHHHHHhhHHHcCCch---hHHcCCC
Confidence 0001111110000 000 011222 2222233333333222221111 0011111
Q ss_pred CCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 043156 354 VTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHN 433 (578)
Q Consensus 354 ~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (578)
++ .+..++.....+.++...+.+++..|-.++ .+....|.....+++.......
T Consensus 243 v~-----eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~----------~~~a~~G~~~~~~~f~lii~a~----------- 296 (403)
T PF03209_consen 243 VG-----ETTRLTAFWGGGTLLGMLLAGFLLSRRLGK----------KRTAALGCLLGALAFALIILAG----------- 296 (403)
T ss_pred HH-----HHHHHHHHHHHHHHHHHHHHHHHhcCCCCc----------hHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 11 122344555566777777777776432222 1344556666666666554433
Q ss_pred ccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccC
Q 043156 434 MLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRG 513 (578)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~ 513 (578)
..-+.+.+....+++|++.++......+...+..+++..|..+|.|...+.++..++..+.+.+.+...
T Consensus 297 ----------~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~- 365 (403)
T PF03209_consen 297 ----------PLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVR- 365 (403)
T ss_pred ----------hcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 122456777788999999999999999999999999999999999999999999999999998876441
Q ss_pred ccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhcc
Q 043156 514 ITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSS 554 (578)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 554 (578)
++. ++-....|..+|.+-+++.++++.+..-+.+
T Consensus 366 ------~~~-~~~~~~aY~~VF~lEa~ll~~a~~ll~~l~~ 399 (403)
T PF03209_consen 366 ------ALF-GNSPALAYGVVFALEAVLLLAALVLLGRLDR 399 (403)
T ss_pred ------Hhc-cCCcchHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 111 1101246778888888888877776655443
No 118
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.42 E-value=1.1e-13 Score=131.93 Aligned_cols=378 Identities=14% Similarity=0.168 Sum_probs=218.2
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchh
Q 043156 47 VNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDA 126 (578)
Q Consensus 47 ~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (578)
.-+..+++.+.++..++..++.+.|+.-..+.+.++|++.||..|-|..-++-+....+|.++. .+ -.....+
T Consensus 64 ~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliF------a~-Ggi~~aF 136 (459)
T KOG4686|consen 64 GALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIF------AA-GGISHAF 136 (459)
T ss_pred hhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHH------Hh-chHHHHH
Confidence 4467788888888888999999999999999999999999998787765544444444443332 01 1335678
Q ss_pred HHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHHHHHH
Q 043156 127 ALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGLSSV 206 (578)
Q Consensus 127 ~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i~~~ 206 (578)
+....+|++.|+|.-....+.+.+...+|..+| ...++|+......+|..+--.+.+++.+..+ .++=...
T Consensus 137 w~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln~vfGlqlSvAR~GstvNf~lm~~ly~~~~---~~~~~~g 207 (459)
T KOG4686|consen 137 WTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LNFVFGLQLSVARLGSTVNFLLMPFLYDTMG---RMFPGVG 207 (459)
T ss_pred HHHHhhheeeccCchhhhhhhcceeEEEecCcc------ccchhhHHHHHHHhhceeeeeecHHHHHHHH---Hhcccch
Confidence 899999999999988888889999999999998 8999999999999999888788888876533 0110000
Q ss_pred HHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhcccCCCCCccchhhHh
Q 043156 207 AVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIETEFLPHRDIFRFLDKA 286 (578)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (578)
-..+++...+-. +..+ ..+ ..+....+. ++..+. .+ .+.
T Consensus 208 hT~LG~~l~~~~-~tc~-------~sl-------ical~lg~~---D~rAer--------------il---------h~e 246 (459)
T KOG4686|consen 208 HTLLGLWLCFEV-KTCK-------QSL-------ICALSLGLS---DDRAER--------------IL---------HLE 246 (459)
T ss_pred HHHHHHHHHHHH-HHHH-------HHH-------HHHHHhhhh---hhHHHH--------------HH---------hhh
Confidence 111111110000 0000 000 000000000 000000 00 000
Q ss_pred hhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhh---ccchhhhhhhccCCCCCCCceeeCCC
Q 043156 287 AIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLA---QLQTFSIQQGLTMDTSVTTSFHIPPA 363 (578)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (578)
.-.. ...|- .+++.+.+. ....+....+.++.... .....+.+.-.... ....+
T Consensus 247 ~g~~----------Ge~pk----Ltdv~~f~p--pfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS-------~~~a~ 303 (459)
T KOG4686|consen 247 EGFL----------GEEPK----LTDVNTFYP--PFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLS-------AVSAG 303 (459)
T ss_pred cCcc----------cCCcc----cccccccCc--cHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCC-------hhhcc
Confidence 0000 00010 011111111 11222233333333322 22223332211111 11122
Q ss_pred cccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCC
Q 043156 364 SLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQP 443 (578)
Q Consensus 364 ~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (578)
-+.+..........|+.+.+.|+++++. +.+..+.+...++-..+.+..
T Consensus 304 ~i~s~vy~Isav~spvfg~i~Dk~G~n~----------~wv~~a~~~tl~~H~~l~Ft~--------------------- 352 (459)
T KOG4686|consen 304 NILSTVYGISAVLSPVFGAISDKYGFNL----------WWVASACILTLLGHSGLFFTF--------------------- 352 (459)
T ss_pred chhhhhhhhhhhhhhhHHHhHhhhccee----------hhHHHHHHHHHHHhhhHHhhh---------------------
Confidence 2333333445667899999999988874 344444444444444444421
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCC
Q 043156 444 LPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAG 523 (578)
Q Consensus 444 ~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~ 523 (578)
.++ ...+.++|++..+..-..|-.+..++|++.-|++-|+.+...++|-.+.+.+.+++.+-. +++
T Consensus 353 --lsP---y~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~------g~y--- 418 (459)
T KOG4686|consen 353 --LSP---YTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGD------GSY--- 418 (459)
T ss_pred --ccH---HHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCC------Cch---
Confidence 222 234567788888877888889999999999999999999999999999999999887311 111
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHhhhcc
Q 043156 524 NNINRNHLNLFFWLLSALSFINFSVYLFMSS 554 (578)
Q Consensus 524 ~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 554 (578)
-+.+.+|...+.+++....+.+...+
T Consensus 419 -----~~le~ffl~~~~~aL~svgil~~~N~ 444 (459)
T KOG4686|consen 419 -----DNLEAFFLIIGLMALTSVGILFYLNK 444 (459)
T ss_pred -----hhHHHHHHHHHHHHHHHHHHHhheec
Confidence 12335566666666665555555443
No 119
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.41 E-value=1.5e-12 Score=137.70 Aligned_cols=173 Identities=12% Similarity=0.049 Sum_probs=133.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCC
Q 043156 35 FGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDP 114 (578)
Q Consensus 35 ~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~ 114 (578)
.....+.+.....+++.|+.+ .|+ .+.+...+.+.++..++.++.|+++||+ ||||.+.++.++..++.++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~---- 296 (399)
T PRK05122 225 LALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLL---- 296 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHH----
Confidence 334455666667788888764 465 3456677788888899999999999998 99999888877666543332
Q ss_pred CCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccc
Q 043156 115 TAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDN 194 (578)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~ 194 (578)
....+...+++.+++.|++.+...|.....+.|.+|+++ |++++++++...++|..++|.+.|++.+.
T Consensus 297 ------~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 364 (399)
T PRK05122 297 ------WLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN------RGAALGAYSVFLDLSLGITGPLAGLVASW 364 (399)
T ss_pred ------HHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223455566778888999998888887778888888765 99999999999999999999999999998
Q ss_pred cCchhHHHHHHHHHHHHHHHHHhcCCCceecCC
Q 043156 195 KGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVV 227 (578)
Q Consensus 195 ~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~ 227 (578)
.||++.|++.+++.+++.+..+...++.+++.|
T Consensus 365 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T PRK05122 365 FGYPSIFLAAALAALLGLALTWLLYRRAPRAVP 397 (399)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhcccccccCC
Confidence 899999999888877777666665555444433
No 120
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.39 E-value=2e-12 Score=139.84 Aligned_cols=177 Identities=14% Similarity=0.097 Sum_probs=132.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
+.+|.+.+..++....+++...++|.|+++++|+|..++++..+.+.++..++.+++|+++||+ |||+.+.+...+...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALI 336 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHH
Confidence 4577788888888888888889999999999999999999999999999999999999999998 999877665443332
Q ss_pred CCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHH-HHHHH
Q 043156 106 PPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCI-GGAIS 184 (578)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~l-G~~~~ 184 (578)
+..+. ......+.....+.+++.|+..............|.+|++. |+++.|+.+...++ |+.++
T Consensus 337 ~~~~~--------~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~------~g~a~gi~~~~g~l~g~~~~ 402 (467)
T PRK09556 337 IFTLG--------VYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA------IGVANGIKGTFAYLFGDSFA 402 (467)
T ss_pred HHHHH--------HHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh------HHHHHHHHHHHHHHHhHHHH
Confidence 21111 00122344445566666665432222222355679999886 99999999998886 77999
Q ss_pred HHHHHHhcc------------ccCchhHHHHHHHHHHHHHHHHHh
Q 043156 185 VTLIVWIQD------------NKGWDRGFGLSSVAVFLATIIFAA 217 (578)
Q Consensus 185 p~l~~~l~~------------~~g~~~~f~i~~~~~~~~~~~~~~ 217 (578)
|.+.|++.+ ..+|+..|++..++.+++.+..+.
T Consensus 403 ~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 403 KVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred hhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 999999998 578999998887777666555443
No 121
>PRK09952 shikimate transporter; Provisional
Probab=99.39 E-value=3.7e-12 Score=136.52 Aligned_cols=184 Identities=16% Similarity=0.055 Sum_probs=132.8
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhh
Q 043156 22 HGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGS 101 (578)
Q Consensus 22 ~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 101 (578)
+++++.........++..+.+|...++.+.|+++++|++......+.........++.++.|+++||+ ||||++..+.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~ 324 (438)
T PRK09952 246 LRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGAL 324 (438)
T ss_pred HHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHH
Confidence 44555555555566777788898899999999999999988766666667777888899999999998 99999887766
Q ss_pred hhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHH-HHHHHH
Q 043156 102 VEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLF-LAVCIG 180 (578)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~-~~~~lG 180 (578)
+..++.++.. ...........+++..++.+++.+...+...++++|.+|++. |+.+.++.+ .+..+|
T Consensus 325 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~------r~tg~g~~~~~~~~lg 392 (438)
T PRK09952 325 IGTLSAFPFF------MALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY------RYSGAGVGYQVASVVG 392 (438)
T ss_pred HHHHHHHHHH------HHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch------hHHHHhHHHHHHHHHH
Confidence 5443221110 000112233344445566677777777888899999999976 999999844 455689
Q ss_pred HHHHHHHHHHhcccc--CchhHHHHHHHHHHHHHHHHHhc
Q 043156 181 GAISVTLIVWIQDNK--GWDRGFGLSSVAVFLATIIFAAG 218 (578)
Q Consensus 181 ~~~~p~l~~~l~~~~--g~~~~f~i~~~~~~~~~~~~~~~ 218 (578)
+.++|.+.+++.+.. +|+.++.+.+++.+++.+..+..
T Consensus 393 g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 393 GGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 999999999997643 48888887777777766665543
No 122
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.38 E-value=9.8e-13 Score=137.84 Aligned_cols=173 Identities=17% Similarity=0.083 Sum_probs=133.4
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhh
Q 043156 22 HGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGS 101 (578)
Q Consensus 22 ~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 101 (578)
+++++..+......++....++....+++.|+++++|.+..+.+.+.....++..++.+++|+++||+ |||+.+..+..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~ 293 (394)
T TIGR00883 215 TKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTV 293 (394)
T ss_pred HhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHH
Confidence 34444567777777788888888889999999999999999999999999999999999999999998 99998775544
Q ss_pred hhccCC-cccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHH-HHHHHHH
Q 043156 102 VEFLPP-PCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNL-LFLAVCI 179 (578)
Q Consensus 102 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~-~~~~~~l 179 (578)
+..+.. .+. .......+...++....+.+++.+...+...+++.|.+|+++ |++++++ +..+..+
T Consensus 294 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~~~~~~ 360 (394)
T TIGR00883 294 LAALLAVPLL-------MALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV------RYTGASLAYNLAGAI 360 (394)
T ss_pred HHHHHHHHHH-------HHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc------eeeEeeehhHhHHHH
Confidence 333211 110 000112345556667777888888888889999999999887 9999998 4556678
Q ss_pred HHHHHHHHHHHhccccC-chhHHHHHHHHH
Q 043156 180 GGAISVTLIVWIQDNKG-WDRGFGLSSVAV 208 (578)
Q Consensus 180 G~~~~p~l~~~l~~~~g-~~~~f~i~~~~~ 208 (578)
|..++|.++|++.++.| |+..++......
T Consensus 361 g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 361 FGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred HhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 99999999999999888 887776655443
No 123
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.37 E-value=5.1e-12 Score=132.01 Aligned_cols=166 Identities=13% Similarity=0.020 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCccccc
Q 043156 33 AAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVF 112 (578)
Q Consensus 33 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~ 112 (578)
...++..........+++.|+++++|.+..+.+++.+...+...++.+++|+++||+ |||+++.++.++..+...+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~-- 282 (375)
T TIGR00899 206 VACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYTGL-- 282 (375)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHHHH--
Confidence 333343344444556788899999999999999988888778888899999999998 99999888766544222111
Q ss_pred CCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhc
Q 043156 113 DPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQ 192 (578)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~ 192 (578)
....+.+.+++.+++.+++.+...+....++.|..|++ |++++++++...++|..++|.++|++.
T Consensus 283 --------~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~g~~~~g~~~ 347 (375)
T TIGR00899 283 --------AADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-------AGAATTLYTNTGRVGWIIAGSVGGILA 347 (375)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-------hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22345556667778888888887788788888988754 679999999999999999999999999
Q ss_pred cccCchhHHHHHHHHHHHHHHHHH
Q 043156 193 DNKGWDRGFGLSSVAVFLATIIFA 216 (578)
Q Consensus 193 ~~~g~~~~f~i~~~~~~~~~~~~~ 216 (578)
+..||+..|++.++..+++.+...
T Consensus 348 ~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 348 ERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HhccchhHHHHHHHHHHHHHHHHh
Confidence 988999999998887777666544
No 124
>PRK03699 putative transporter; Provisional
Probab=99.37 E-value=4.8e-12 Score=133.72 Aligned_cols=171 Identities=13% Similarity=0.133 Sum_probs=132.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
+.++.+.+..++....++.+..++|.|+++++|+|..+.+.+.+.+.++..++.+++|+++||+ |||+++.....+..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~ 283 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALV 283 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHH
Confidence 4556666666666677788889999999999999999999999999999999999999999998 999988876655443
Q ss_pred CCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHH
Q 043156 106 PPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISV 185 (578)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p 185 (578)
...+. ....+...+.+..++.|++.+...+...+...|..|.+ +++..+..+...++|..++|
T Consensus 284 ~~~~~----------~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~g~~i~p 346 (394)
T PRK03699 284 LMYLF----------VNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-------SPKLVNFILTCGTIGTMLTF 346 (394)
T ss_pred HHHHH----------HHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-------CHHHHHHHHHhhhHHHHHHH
Confidence 32221 12234444555666777777777777777777877644 56778888888899999999
Q ss_pred HHHHHhccccCchhHHHHHHHHHHHHHHH
Q 043156 186 TLIVWIQDNKGWDRGFGLSSVAVFLATII 214 (578)
Q Consensus 186 ~l~~~l~~~~g~~~~f~i~~~~~~~~~~~ 214 (578)
.+.|++.+..|++..|++.+++.+++.+.
T Consensus 347 ~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (394)
T PRK03699 347 VVTSPIVAHFGLQAALLTANGLYAVVFVM 375 (394)
T ss_pred HHHHHHHHHhCchhhhhhhHHHHHHHHHH
Confidence 99999999899999998877766655443
No 125
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.36 E-value=5e-12 Score=131.65 Aligned_cols=170 Identities=14% Similarity=0.097 Sum_probs=130.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccC
Q 043156 27 TSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLP 106 (578)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~ 106 (578)
..+.+....+...........+.+.|. +++|.+..+.+.+.+.+.++..++.++.|+++||+ |||+.+.++.++..++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~ 283 (377)
T TIGR00890 206 QFWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVG 283 (377)
T ss_pred cHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHH
Confidence 344444444555555555555666664 67899999999999999999999999999999998 9999998888777655
Q ss_pred CcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 043156 107 PPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVT 186 (578)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~ 186 (578)
.++. ..........++....+.+++.+...+..+.++.|.+|+++ |++.+++++...++|..++|.
T Consensus 284 ~~~~--------~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~g~~~~~~ 349 (377)
T TIGR00890 284 MAAM--------LFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN------SAANYGFLYTAKAVAGIFGGL 349 (377)
T ss_pred HHHH--------HHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh------hhhHhHHHHHHHHHHHHHHHH
Confidence 4332 00111122334455667788888877888889999999887 999999999999999999999
Q ss_pred HHHHhccccCchhHHHHHHHHHHHHH
Q 043156 187 LIVWIQDNKGWDRGFGLSSVAVFLAT 212 (578)
Q Consensus 187 l~~~l~~~~g~~~~f~i~~~~~~~~~ 212 (578)
+.|++.++.||++.|.+.+++.++++
T Consensus 350 ~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 350 IASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 99999999999999988877665543
No 126
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.35 E-value=9.6e-12 Score=127.95 Aligned_cols=174 Identities=24% Similarity=0.229 Sum_probs=147.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhh-hhhhhhhhhc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFK-AVLISGSVEF 104 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~-~~~~~~~~~~ 104 (578)
|..+...+..+.....+.....+.+.++.+.+|.+..+.+++.+...++..++.++.|+++||+ |||+ .+.++.++..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 253 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAA 253 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHH
Confidence 4455556666677777777788899999888899999999999999999999999999999998 9999 8888888777
Q ss_pred cCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHH
Q 043156 105 LPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAIS 184 (578)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~ 184 (578)
++.++. ....+....++..++.+++.+...+....++.|..|+++ |++.+++++...++|..++
T Consensus 254 i~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~ 317 (352)
T cd06174 254 LGLLLL----------ALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEA------RGTASGLFNTFGSLGGALG 317 (352)
T ss_pred HHHHHH----------HHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH------HHHHHHHHHHHHHHHHHHH
Confidence 554443 223446677888999999999999999999999999876 9999999999999999999
Q ss_pred HHHHHHhccccCchhHHHHHHHHHHHHHHHHH
Q 043156 185 VTLIVWIQDNKGWDRGFGLSSVAVFLATIIFA 216 (578)
Q Consensus 185 p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~ 216 (578)
|.+.+++.+..+|+..|.+.+++.+++.+...
T Consensus 318 ~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 318 PLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 99999999888999999998888777665543
No 127
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.32 E-value=9.5e-12 Score=139.47 Aligned_cols=135 Identities=13% Similarity=0.018 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhcccccc
Q 043156 66 NQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKA 145 (578)
Q Consensus 66 ~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~ 145 (578)
....+..++..++.+++|+++||+ |||+++.++.++.+++.++. ....+...+++.+++.++..++.++
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~----------~~~~s~~~ll~~~~l~g~~~~~~~~ 667 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFL----------SFGNSESAMIALLCLFGGLSIAAWN 667 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHH----------HHHccHHHHHHHHHHHHHHHHHHHH
Confidence 334556688899999999999998 99999999888877554432 2233445566667777877777888
Q ss_pred ccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhc
Q 043156 146 ALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAG 218 (578)
Q Consensus 146 ~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~ 218 (578)
...++++|++|++. |++++|+.+...++|+++||.+++++.+. +...+|++.+++.+++.++..+.
T Consensus 668 ~~~a~~aEl~Pt~~------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~L 733 (742)
T TIGR01299 668 ALDVLTVELYPSDK------RATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKL 733 (742)
T ss_pred HHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhC
Confidence 88999999999986 99999999999999999999999988764 45677887777766665554443
No 128
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.32 E-value=9.5e-12 Score=131.72 Aligned_cols=177 Identities=12% Similarity=0.004 Sum_probs=131.1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH---HHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhh
Q 043156 25 IKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLA---EAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGS 101 (578)
Q Consensus 25 ~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~---~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 101 (578)
++..+.++...+........+.++++.|+.+..+.... ..+.+.+...++..++.++.|+++||+ |||+++.++.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~ 296 (408)
T PRK09874 218 PKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALI 296 (408)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHH
Confidence 33333333333444444445567777887765443222 245566667778888899999999998 99999988877
Q ss_pred hhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHH
Q 043156 102 VEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGG 181 (578)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~ 181 (578)
+..++.++. ....+.+.+++.+++.|++.+...|...+++.+..|+++ |++.+++++...++|.
T Consensus 297 ~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~ 360 (408)
T PRK09874 297 FSVLLLIPM----------SFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI------AGRIFSYNQSFRDIGN 360 (408)
T ss_pred HHHHHHHHH----------HHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc------ceeeehHHHHHHHHHH
Confidence 665433322 223456667788889999999988988888888888776 9999999999999999
Q ss_pred HHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhc
Q 043156 182 AISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAG 218 (578)
Q Consensus 182 ~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~ 218 (578)
.+||.++|++.+++||+..|++.+++.+++.+..+..
T Consensus 361 ~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 361 VTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888877766655443
No 129
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.32 E-value=2.7e-11 Score=126.59 Aligned_cols=173 Identities=15% Similarity=0.000 Sum_probs=129.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhh--h------h
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKA--V------L 97 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~--~------~ 97 (578)
|..+..+...++....+.....+.+.|+++++|.+..+.+++.+...++..++.+++|+++||+ |||+. . .
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence 4566777778888888888889999999999999999999999999999999999999999998 99861 1 1
Q ss_pred hhhhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHH
Q 043156 98 ISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAV 177 (578)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~ 177 (578)
++.++..+.... .....+....+....+.+.+.+ ..+...+++.|.+|+++ |++.+++++...
T Consensus 294 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~ 356 (399)
T TIGR00893 294 IAGLVLSLLMFA----------TNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNI------AGLTGGLINSLG 356 (399)
T ss_pred HHHHHHHHHHHH----------hccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhH------HHHHHHHHHHHH
Confidence 111111100001 0112233333333333344444 67888999999999887 999999999999
Q ss_pred HHHHHHHHHHHHHhccccC-chhHHHHHHHHHHHHHHHHH
Q 043156 178 CIGGAISVTLIVWIQDNKG-WDRGFGLSSVAVFLATIIFA 216 (578)
Q Consensus 178 ~lG~~~~p~l~~~l~~~~g-~~~~f~i~~~~~~~~~~~~~ 216 (578)
++|..++|.+.|++.+..| |+..|.+.++..+++.+..+
T Consensus 357 ~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 357 NLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888 99999888877666655543
No 130
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.31 E-value=8.1e-12 Score=133.00 Aligned_cols=178 Identities=10% Similarity=0.038 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--------HHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhh
Q 043156 29 LLILAAFGFENLATIALGVNLVTYFNGVLHLD--------LAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISG 100 (578)
Q Consensus 29 ~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s--------~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~ 100 (578)
+.+++..++..........+.+.|+++ .|.+ ....+.+.+...+...++.++.|+++||+ |||+++.++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~ 288 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSL 288 (418)
T ss_pred eeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHH
Confidence 344444555544444455777788754 4544 35678999999999999999999999998 9999999998
Q ss_pred hhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHH-HHHHH
Q 043156 101 SVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLF-LAVCI 179 (578)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~-~~~~l 179 (578)
++..++..+.. .......+...+++..++.+++.+...+....+++|.+|+++ |++++++++ ....+
T Consensus 289 ~~~~v~~~l~~------~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~------~g~~~g~~~~~~~~l 356 (418)
T TIGR00889 289 VAWALRFGFFA------YGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI------RASAQGLFTLMCNGF 356 (418)
T ss_pred HHHHHHHHHHH------HcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHhh
Confidence 88775533320 000001134566778889999999888888999999999886 999999997 56789
Q ss_pred HHHHHHHHHHHhccc------cCchhHHHHHHHHHHHHHHHHHhcCC
Q 043156 180 GGAISVTLIVWIQDN------KGWDRGFGLSSVAVFLATIIFAAGLP 220 (578)
Q Consensus 180 G~~~~p~l~~~l~~~------~g~~~~f~i~~~~~~~~~~~~~~~~~ 220 (578)
|.++||.++|++.++ +||+..|.+.+++.+++.+..++..+
T Consensus 357 g~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 357 GSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999876 46999999888776665555544443
No 131
>PRK12382 putative transporter; Provisional
Probab=99.30 E-value=1.3e-11 Score=130.17 Aligned_cols=162 Identities=16% Similarity=0.149 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCC
Q 043156 37 FENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTA 116 (578)
Q Consensus 37 ~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~ 116 (578)
.....+..+..+.+.|+++ .|++. .+.....+.++..++.++.|++.||+ ||||.+.++..+..++.++.
T Consensus 227 l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~------ 296 (392)
T PRK12382 227 LQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLL------ 296 (392)
T ss_pred HHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHH------
Confidence 3445555666777788764 46553 56666777788889999999999998 99999988887766554332
Q ss_pred CccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccC
Q 043156 117 GCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKG 196 (578)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g 196 (578)
....+....++..++.+++.+...|...+.+.|.+|+++ |++.+++++...++|..++|.+.|++.+++|
T Consensus 297 ----~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g 366 (392)
T PRK12382 297 ----WLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------RGTALGGYAAFQDIAYGVSGPLAGMLATSFG 366 (392)
T ss_pred ----HHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 223455566778888899988888888888899998776 9999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHhc
Q 043156 197 WDRGFGLSSVAVFLATIIFAAG 218 (578)
Q Consensus 197 ~~~~f~i~~~~~~~~~~~~~~~ 218 (578)
|+..|.+.+++.+++.+..+..
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 367 YPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred chHHHHHHHHHHHHHHHHHHhh
Confidence 9999999888777766655543
No 132
>PRK15075 citrate-proton symporter; Provisional
Probab=99.30 E-value=1.5e-11 Score=131.61 Aligned_cols=161 Identities=14% Similarity=0.113 Sum_probs=113.1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhc
Q 043156 25 IKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEF 104 (578)
Q Consensus 25 ~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~ 104 (578)
++.....+...++....++.+..+.|.|+++.+|++..+.+++...+.++..++.+++|+++||+ ||||++.++.++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~ 315 (434)
T PRK15075 237 WRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAI 315 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHH
Confidence 33333334444556677888889999999999999999999998889999999999999999998 99998877654432
Q ss_pred cCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHH-HHHHHH
Q 043156 105 LPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAV-CIGGAI 183 (578)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~-~lG~~~ 183 (578)
+..... . .......+.....+..++.+++.+...+....++.|.+|++. |++++++.+... .+++.+
T Consensus 316 ~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~------rg~~~g~~~~~~~~~~g~~ 383 (434)
T PRK15075 316 LTAYPA----L--SWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV------RTAGFSLAYSLATAIFGGF 383 (434)
T ss_pred HHHHHH----H--HHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc------cchheeHHHHHHHHHHhhh
Confidence 111100 0 000112233333344445556666666666788999999987 999999855444 456788
Q ss_pred HHHHHHHhccccCch
Q 043156 184 SVTLIVWIQDNKGWD 198 (578)
Q Consensus 184 ~p~l~~~l~~~~g~~ 198 (578)
+|.+.|++.++.|++
T Consensus 384 ~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 384 TPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHHHHHhcCCc
Confidence 999999999887754
No 133
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.29 E-value=4.6e-11 Score=126.19 Aligned_cols=177 Identities=10% Similarity=0.018 Sum_probs=133.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
+..+.+.+..++....+++...+++.|+++ +|++..+++...+.+.++..++.++.|+++||+ |||+.+.++..+..+
T Consensus 205 ~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~ 282 (393)
T PRK09705 205 PRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLV 282 (393)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHH
Confidence 345556666667778888888999999975 799999999999999999999999999999998 999998888766664
Q ss_pred CCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHH
Q 043156 106 PPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISV 185 (578)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p 185 (578)
+..+. . ....+..... ..+.+++.+...|.......|.+++++ +|++.+++.+...+++..++|
T Consensus 283 ~~~~~-------~--~~~~~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~-----~~g~~~g~~~~~~~~~~~~gp 346 (393)
T PRK09705 283 GFCGF-------I--WLPLQLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPA-----IAGKLVAFMQGIGFIIAGLAP 346 (393)
T ss_pred HHHHH-------H--HccchHHHHH--HHHHHHhccchHHHHHHHHHhhcCCHH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 43332 0 0111211221 234577777777777667778776443 389999999999999999999
Q ss_pred HHHHHhccccC-chhHHHHHHHHHHHHHHHHHhcCC
Q 043156 186 TLIVWIQDNKG-WDRGFGLSSVAVFLATIIFAAGLP 220 (578)
Q Consensus 186 ~l~~~l~~~~g-~~~~f~i~~~~~~~~~~~~~~~~~ 220 (578)
.+.|++.+..| |+..|++.++..+...+......+
T Consensus 347 ~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (393)
T PRK09705 347 WFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAP 382 (393)
T ss_pred HHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999876 888888877776666555554444
No 134
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.29 E-value=1.9e-11 Score=129.48 Aligned_cols=172 Identities=12% Similarity=0.004 Sum_probs=128.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCC
Q 043156 28 SLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPP 107 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~ 107 (578)
.+.+....++....++....++|.|++ +.|++..+.+.+.+.+.++..++.++.|+++||+ |||+.+..+.+...++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~ 299 (406)
T PRK11551 222 TLLLWISYFFTLIVLYFLLNWLPSLLV-GQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASL 299 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence 333444445555666777778888876 4799999999999999999999999999999998 99999887655544332
Q ss_pred cccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 043156 108 PCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTL 187 (578)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l 187 (578)
++. ....+...+.+..++.+++.+...+...+++.|.+|+++ |+++.++++...++|..++|.+
T Consensus 300 ~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~~g~~~ 363 (406)
T PRK11551 300 AAL----------AAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------RGTGVGAAVAVGRLGSMAGPLL 363 (406)
T ss_pred HHH----------HhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------hhhhhhHHHHhhhHHHHHHhhh
Confidence 221 112344445556666777777777888889999999887 9999999999999999999999
Q ss_pred HHHhccccC-chhHHHHHHHHHHHHHHHHHh
Q 043156 188 IVWIQDNKG-WDRGFGLSSVAVFLATIIFAA 217 (578)
Q Consensus 188 ~~~l~~~~g-~~~~f~i~~~~~~~~~~~~~~ 217 (578)
+|++.++.+ |...+++.....+++.+..+.
T Consensus 364 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 364 AGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred HhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999987654 566666665555555444443
No 135
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.29 E-value=3.3e-11 Score=126.81 Aligned_cols=169 Identities=17% Similarity=-0.002 Sum_probs=141.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
|..+..++..++.........++.+.|++ ++|.+..+.|.+.+...++..+..++.|++.||+ |+|+++.++.+...+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~-~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQ-AAGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 45666667777777888888889999996 5899999999999999999999999999999998 999999999888886
Q ss_pred CCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHH-HHHHHHHHHH
Q 043156 106 PPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLF-LAVCIGGAIS 184 (578)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~-~~~~lG~~~~ 184 (578)
...+. ...++.+.+++...+.++..+...++...++.+. |+++ |+++.++++ ....+|..++
T Consensus 283 ~~~~~----------~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~~~q~~~~~~~~g~g~~~g 345 (382)
T TIGR00902 283 RWAII----------GAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IAKLQALYNALAMGGLIAIF 345 (382)
T ss_pred HHHHH----------HhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HHHHHHHHHHHHHHHHHHHH
Confidence 65443 4467778888899999999999999999999987 7765 899999876 4678999999
Q ss_pred HHHHHHhccccCchhHHHHHHHHHHHHHHH
Q 043156 185 VTLIVWIQDNKGWDRGFGLSSVAVFLATII 214 (578)
Q Consensus 185 p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~ 214 (578)
|.++|++.+++|+ ..|++.+.+.+++++.
T Consensus 346 ~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 346 TAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 9999999999886 6677777766665544
No 136
>PRK03545 putative arabinose transporter; Provisional
Probab=99.29 E-value=5.3e-11 Score=125.49 Aligned_cols=175 Identities=11% Similarity=-0.084 Sum_probs=132.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCC
Q 043156 28 SLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPP 107 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~ 107 (578)
.+......++....+++...+++.|+++.+|.|..+++++.+.+.++..++.++.|+++||+ |||+.. .+..+...+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~~ 284 (390)
T PRK03545 207 LVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVCL 284 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHHH
Confidence 33344444555556666677888898888999999999999999999999999999999998 987654 4433333222
Q ss_pred cccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 043156 108 PCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTL 187 (578)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l 187 (578)
... .....+...+++..++.|++.+...+...+.+.|..|+ + |++++++++...++|..+||.+
T Consensus 285 ~~l---------~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~------~~~~~g~~~~~~~~g~~~G~~~ 348 (390)
T PRK03545 285 LLL---------LPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD-A------TDVAMALFSGIFNIGIGAGALL 348 (390)
T ss_pred HHH---------HHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC-c------HHHHHHHHHHHHHHHHHHHHHH
Confidence 111 02234555666777778888777667667777787664 4 8999999999999999999999
Q ss_pred HHHhccccCchhHHHHHHHHHHHHHHHHHhcCC
Q 043156 188 IVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLP 220 (578)
Q Consensus 188 ~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~ 220 (578)
+|++.+++|++..|++.+.+.+++++......+
T Consensus 349 ~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 349 GNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999999999998888777776655544
No 137
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.28 E-value=4.4e-11 Score=125.74 Aligned_cols=160 Identities=14% Similarity=0.176 Sum_probs=123.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCC
Q 043156 36 GFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPT 115 (578)
Q Consensus 36 ~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~ 115 (578)
+.....+.....++|.|+++ .|.+.++++.+.+...++..++.++.|+++||+ |||+++.++..+..++....
T Consensus 210 ~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~----- 282 (381)
T PRK03633 210 IISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAM----- 282 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHH-----
Confidence 33334444455678888865 699999999999999999999999999999998 99999988877766443221
Q ss_pred CCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 043156 116 AGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNK 195 (578)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~ 195 (578)
. . .......+.+.+++.+...|...+.+.|..|+++ ++...+.++...++|.++||.++|++.+++
T Consensus 283 -----~--~-~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~~igp~~~G~l~~~~ 348 (381)
T PRK03633 283 -----L--S-QAAMAPALFILGAAGFTLYPVAMAWACEKVEHHE------LVAMNQALLLSYTVGSLLGPSFTAMLMQNY 348 (381)
T ss_pred -----h--h-hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 1 1223345666777777778888888899988765 677788888889999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHH
Q 043156 196 GWDRGFGLSSVAVFLATIIFA 216 (578)
Q Consensus 196 g~~~~f~i~~~~~~~~~~~~~ 216 (578)
+|++.|.+.+.+.+++.+..+
T Consensus 349 g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 349 SDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred CccHHHHHHHHHHHHHHHHHH
Confidence 999999988777766654443
No 138
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.28 E-value=1.2e-11 Score=131.80 Aligned_cols=165 Identities=12% Similarity=0.069 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccc
Q 043156 35 FGFENLATIALGVNLVTYFNGVL---HLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNV 111 (578)
Q Consensus 35 ~~~~~~~~~~~~~~l~~yl~~~l---g~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~ 111 (578)
.+.....+.......+.|+.+.+ +.+..+.+.+.+...++..++.+++|+++||+ ||||.+.++.++..++.++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~- 309 (420)
T PRK09528 232 VIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGS- 309 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHH-
Confidence 33333444444455677766543 56777889999999999999999999999998 99999988877766544332
Q ss_pred cCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHH-HHHHHHHHHHHHHHHHHH
Q 043156 112 FDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNL-LFLAVCIGGAISVTLIVW 190 (578)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~-~~~~~~lG~~~~p~l~~~ 190 (578)
....+.+.+++.+++.+++.+...+....++.|.+|++. |++..+. ++...++|.+++|.+.|+
T Consensus 310 ---------~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~~~~~~~~~~lg~~ig~~~~G~ 374 (420)
T PRK09528 310 ---------GFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIYLVGFQFAKQLGAVFLSTLAGN 374 (420)
T ss_pred ---------HhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeeeeehHHHHHHHHHHHHHHHHHH
Confidence 234566777788888888888777777788999999876 7877665 677889999999999999
Q ss_pred hccccCchhHHHHHHHHHHHHHHHHH
Q 043156 191 IQDNKGWDRGFGLSSVAVFLATIIFA 216 (578)
Q Consensus 191 l~~~~g~~~~f~i~~~~~~~~~~~~~ 216 (578)
+.+.+||+..|.+.+++.++..++.+
T Consensus 375 l~~~~G~~~~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 375 LYDSIGFQGTYLILGGIVLLFTLISV 400 (420)
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999988777655554444
No 139
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.27 E-value=4.6e-10 Score=114.92 Aligned_cols=386 Identities=12% Similarity=-0.021 Sum_probs=211.6
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhH
Q 043156 48 NLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAA 127 (578)
Q Consensus 48 ~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (578)
....|.++-+| +...+-|...+|.+.+....+.+-|+.|++ |-|.+.+++.....+|..+=.+ .......+.+.
T Consensus 66 ~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~i----ss~p~v~~~f~ 139 (480)
T KOG2563|consen 66 PINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLI----SSLPFVPPLFR 139 (480)
T ss_pred hHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhh----ccCccccccch
Confidence 34466777778 788889999999999999999999999998 9999999999999988655311 01111113333
Q ss_pred --HHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccc------cCchh
Q 043156 128 --LLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDN------KGWDR 199 (578)
Q Consensus 128 --~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~------~g~~~ 199 (578)
..+.+-.+.+..+-......+.+.+-||++++ |+.+..+-.++.-+|.+++.++...+..+ ..|..
T Consensus 140 ~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q------ra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~ 213 (480)
T KOG2563|consen 140 RPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ------RAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLF 213 (480)
T ss_pred hhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch------hhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHH
Confidence 56677777777776666666777888999988 99999987777777777777666666433 34544
Q ss_pred --HHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhhhhhchhhhhhhhcccCCCC
Q 043156 200 --GFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMELYEINMDKEAAIETEFLPHR 277 (578)
Q Consensus 200 --~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (578)
.|+....+..+.++...+.+++.++.+|.. +... . .
T Consensus 214 ~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~-s~~~-------------------------~---------------~- 251 (480)
T KOG2563|consen 214 FTLFLGVECLAALLLALVLFVFTKKPPTPPSA-SQAA-------------------------L---------------Q- 251 (480)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCch-hHhh-------------------------h---------------h-
Confidence 344333333333333333333333333321 0000 0 0
Q ss_pred CccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhccchhhhhhhccCCCCCCCc
Q 043156 278 DIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQLQTFSIQQGLTMDTSVTTS 357 (578)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (578)
+.++...-+. -..++.-++..+.+-+..-.|+.++..+ ++... .....
T Consensus 252 -~~~f~~si~~-----------------------~~~n~~F~il~~~ygi~~g~F~~l~~~l-----~~~l~-~sgY~-- 299 (480)
T KOG2563|consen 252 -DASFPKSIKS-----------------------CFKNRQFIILAICYGIGLGLFNSLSTLL-----NLALC-PSGYE-- 299 (480)
T ss_pred -cCcHHHHHHH-----------------------HHcCccHHHHHHHHhhhHHHHHHHHHHh-----hhccc-cccCC--
Confidence 0011111000 0111111111111112222222222211 11111 11111
Q ss_pred eeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCC
Q 043156 358 FHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDA 437 (578)
Q Consensus 358 ~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (578)
+...+.......+..++.+.+.+.+.||..+- + ..+.+-+....++.+.+....
T Consensus 300 -~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~f--------k--~~~~v~~~~~~v~~~~l~~~t--------------- 353 (480)
T KOG2563|consen 300 -GVFAGYIGALMIVAGMLGALASGIIADKTKKF--------K--LTTLVLYLFALVGTLMLLTCT--------------- 353 (480)
T ss_pred -ccccchhHHHHHHHHHHHHHHHHhhhhhhhhH--------H--HHHHHHHHHHHHHHHHHHHhh---------------
Confidence 12345555555666777777777777663322 1 122223333333311111111
Q ss_pred CCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCC
Q 043156 438 IPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQS 517 (578)
Q Consensus 438 ~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~ 517 (578)
...-..+++.....+.|+.+....|...++..|..=+...|+..|+.++..++-+++-..+.+...+.-.. .
T Consensus 354 -----~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~---~ 425 (480)
T KOG2563|consen 354 -----LFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGP---P 425 (480)
T ss_pred -----ccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCC---C
Confidence 01112334444556777787888999999999998888889999999887777666666665555421100 0
Q ss_pred CCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccccccccc
Q 043156 518 GGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYNYRPQTSV 564 (578)
Q Consensus 518 ~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~ 564 (578)
+.+.+ .=+..+..+++++++..++...+++++.|..
T Consensus 426 ~~~~~-----------~~i~~~~~~~l~~~lva~~r~~y~R~~~e~~ 461 (480)
T KOG2563|consen 426 GNTFP-----------ANIFLTVSALLGAILVAFFRPDYRRLRAEAG 461 (480)
T ss_pred CCCcc-----------chhHhHHHHHHHHHHHhhhhhhHHhHhhhhc
Confidence 01221 1234455566666777777777766655543
No 140
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.26 E-value=2.7e-11 Score=128.94 Aligned_cols=162 Identities=14% Similarity=-0.032 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCcccc
Q 043156 42 TIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKI 121 (578)
Q Consensus 42 ~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (578)
..+...++|.|+++.+|.+..+.+++.+...++..++.++.|+++||. ++++++.++.++..++.++. .
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~----------~ 307 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLF----------G 307 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHH----------H
Confidence 345667788999888999999999999999999999999999999996 88888887776665443332 2
Q ss_pred ccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHH
Q 043156 122 EGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGF 201 (578)
Q Consensus 122 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f 201 (578)
..++.....+..++.|++.+...+...+++.|..|++. |++++++++...++|..+||.+.|++.+.+|++..+
T Consensus 308 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~ 381 (417)
T PRK10489 308 LMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------LGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASA 381 (417)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------HHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHH
Confidence 23455556677777888888777777888999999776 999999999999999999999999999988988888
Q ss_pred HHHHHHHHHHHHHHHhcCC
Q 043156 202 GLSSVAVFLATIIFAAGLP 220 (578)
Q Consensus 202 ~i~~~~~~~~~~~~~~~~~ 220 (578)
++.+.+.++..++.....+
T Consensus 382 ~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 382 SASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 8777665554444444333
No 141
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.26 E-value=2.4e-11 Score=123.46 Aligned_cols=180 Identities=18% Similarity=0.164 Sum_probs=137.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhcc-chhhhhhhhhhh-h
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFI-GRFKAVLISGSV-E 103 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~-Grr~~~~~~~~~-~ 103 (578)
|.+|.+++.+++..+.-|++..+.|.|+.++.|+|..++++..+.|-.++..+.++.||+|||+. |||....+.+.+ .
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 77999999999999999999999999999999999999999999999999999999999999987 777654433222 2
Q ss_pred ccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHH-HHH
Q 043156 104 FLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCI-GGA 182 (578)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~l-G~~ 182 (578)
.+.... .+.....+..+..+..+.+|+-.-+..-.+-....|..|++- -+++.|+......+ |+.
T Consensus 332 ~~~~~~--------~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A------aGtA~Gf~Glf~Yl~Ga~ 397 (448)
T COG2271 332 TASLVL--------YWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA------AGTATGFVGLFAYLIGAA 397 (448)
T ss_pred HHHHHH--------HHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh------ccchhchhhhHHHHhhHH
Confidence 222111 122222345555555555555443333344566789999876 69999998888888 999
Q ss_pred HHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcC
Q 043156 183 ISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGL 219 (578)
Q Consensus 183 ~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~ 219 (578)
.+....|++.+.+||...|.+..+..+++.+.+....
T Consensus 398 ~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~ 434 (448)
T COG2271 398 LAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVW 434 (448)
T ss_pred hcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999989999999988777766665554433
No 142
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.26 E-value=4.2e-11 Score=128.20 Aligned_cols=175 Identities=14% Similarity=0.070 Sum_probs=120.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch--hhhhhh---hh
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGR--FKAVLI---SG 100 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr--r~~~~~---~~ 100 (578)
+.++.+.+..+.....++.+..++|.|+.+++|++..+++...+.+.++..++.+++|+++||+.+| ++.... +.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~ 322 (434)
T PRK11663 243 PYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGI 322 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHH
Confidence 3456666666666677777788999999889999999999999999999999999999999997222 222111 11
Q ss_pred hhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHH
Q 043156 101 SVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIG 180 (578)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG 180 (578)
+......... . ..+.....+..++.|++...........++|.+|+++ |+++.++.+...++|
T Consensus 323 ~~~~~~~~~~----------~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g 385 (434)
T PRK11663 323 LLSVGSLWLM----------P-FASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA------AGAATGFVGLFAYLG 385 (434)
T ss_pred HHHHHHHHHc----------c-cccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh------HHhHHHHHHHHHHHH
Confidence 1111111110 1 1122222232333333222111122356688888776 999999999999999
Q ss_pred HHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHh
Q 043156 181 GAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAA 217 (578)
Q Consensus 181 ~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~ 217 (578)
..++|.+.|++.++.||+..|++.+++.+++.+..+.
T Consensus 386 ~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 386 AALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred HHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888887666554443
No 143
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.25 E-value=5e-12 Score=111.78 Aligned_cols=132 Identities=22% Similarity=0.256 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccc
Q 043156 69 TNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALP 148 (578)
Q Consensus 69 ~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~ 148 (578)
+.+.++..++.++.|+++||+ |||+.+.++..+..++.++. ....+...+.+.+++.+++.+...+...
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 73 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMF----------ALSSNITVLIIARFLQGFGAAFALVAGA 73 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHH----------HHhccHHHHHHHHHHHHHHHHHHHHhHH
Confidence 445678889999999999998 99999998887777554332 2235667788889999999999899999
Q ss_pred cccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHh
Q 043156 149 PYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAA 217 (578)
Q Consensus 149 ~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~ 217 (578)
+++.|.+|+++ |++.+++.+...++|..++|.+.+++.+..+|++.|++.+....++.+..++
T Consensus 74 ~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 74 ALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred HHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Confidence 99999999887 9999999999999999999999999998889999999887776665555444
No 144
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.25 E-value=3.6e-11 Score=129.47 Aligned_cols=178 Identities=16% Similarity=0.103 Sum_probs=122.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch--hhhhh-hhhhh
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGR--FKAVL-ISGSV 102 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr--r~~~~-~~~~~ 102 (578)
+.+|...+..++....+++...++|.|++++.|++..+++.....+.++..++.+++|+++||+ ++ |+... ....+
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~-~~~r~~~~~~~~~~l 331 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FRGNRGATGVFFMTL 331 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCCcchHHHHHHHH
Confidence 4567777777777788888889999999999999999999999999999999999999999996 54 33222 22222
Q ss_pred hccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHH
Q 043156 103 EFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGA 182 (578)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~ 182 (578)
..++.++. ......+....++..++.+.+.....+....+..|.+|++. |++++++.+...++|+.
T Consensus 332 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~ 397 (452)
T PRK11273 332 VTIATIVY--------WLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGFTGLFGYLGGS 397 (452)
T ss_pred HHHHHHHH--------HHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh------hhhHHHHHHHHHHHHHH
Confidence 22221111 00111233333333344443322222223345679999886 99999999988888865
Q ss_pred H-HHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhc
Q 043156 183 I-SVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAG 218 (578)
Q Consensus 183 ~-~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~ 218 (578)
+ +|.+.|++.++.||+..|++.++..+++++.....
T Consensus 398 ~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 398 VAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 434 (452)
T ss_pred HhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 5 79999999999999999998887766665554433
No 145
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.24 E-value=1.3e-11 Score=129.62 Aligned_cols=191 Identities=13% Similarity=0.063 Sum_probs=139.6
Q ss_pred ccccccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch-hh
Q 043156 17 AVKYKHGGIKTSLLILAAFGFENLATIALGVNLVTYFNG-VLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGR-FK 94 (578)
Q Consensus 17 ~~~~~~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~-~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr-r~ 94 (578)
.++..+.+||.+++..+..++....+....+..-.|+++ +.+.+.+..|++++...++..+..+..|+.+.|. |+ |+
T Consensus 25 ~~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~ 103 (488)
T KOG2325|consen 25 PLDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKK 103 (488)
T ss_pred cccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCccc
Confidence 334457789999999999999888888777777788865 4778888999999999999999999999999997 75 66
Q ss_pred hhhhhhhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHH
Q 043156 95 AVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLF 174 (578)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~ 174 (578)
=++.|+++..+|-++- ...........+.++++|++.|+|.|. ....-+++++....++ |.++++...
T Consensus 104 Pli~s~ii~~~g~llY-----~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~d------R~rA~a~~~ 171 (488)
T KOG2325|consen 104 PLIVSFLIAIIGNLLY-----LALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVED------RPRAFAATS 171 (488)
T ss_pred CHHHHHHHHHHHHHHH-----HHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccc------hHHHHHHhh
Confidence 6677777777664331 001111122677889999999999775 3455788888887777 999999877
Q ss_pred HHHHHHHHHHHHHHHHhc----cc---------cCchhHHHHHHHHHHHHHHHHHhcCC
Q 043156 175 LAVCIGGAISVTLIVWIQ----DN---------KGWDRGFGLSSVAVFLATIIFAAGLP 220 (578)
Q Consensus 175 ~~~~lG~~~~p~l~~~l~----~~---------~g~~~~f~i~~~~~~~~~~~~~~~~~ 220 (578)
.+..+|.++||.+...+. +. .-|..+=|+.+++.++..+.+.+..+
T Consensus 172 ~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~ 230 (488)
T KOG2325|consen 172 GGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFK 230 (488)
T ss_pred hHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhhee
Confidence 777777777777765442 11 12456667777776666665555444
No 146
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.24 E-value=5.9e-11 Score=120.76 Aligned_cols=186 Identities=11% Similarity=-0.028 Sum_probs=149.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhc
Q 043156 25 IKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEF 104 (578)
Q Consensus 25 ~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~ 104 (578)
.|..|.+++..+...-+|.++..+++.|+++++|.+..++|.....+.+.+.+..++||+||||+ |.+|+.++....++
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~ 295 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMA 295 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999999999999999999998 99898888777777
Q ss_pred cCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHH
Q 043156 105 LPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAIS 184 (578)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~ 184 (578)
++..+..+ ..-......+....+..-+..++..|.-..+...++...+|.+ -+...|+.....++|+..-
T Consensus 296 ~~~~~l~~---~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-------~G~v~G~vga~G~lGGf~l 365 (417)
T COG2223 296 LAAALLSL---FLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-------TGAVTGIVGAIGGLGGFFL 365 (417)
T ss_pred HHHHHHHc---cccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-------hhHHHHHHHHhccccccch
Confidence 55443311 0000011244445555555566777777778899999999876 4899999999999999999
Q ss_pred HHHHHHhccccC-chhHHHHHHHHHHHHHHHHHhcCCC
Q 043156 185 VTLIVWIQDNKG-WDRGFGLSSVAVFLATIIFAAGLPL 221 (578)
Q Consensus 185 p~l~~~l~~~~g-~~~~f~i~~~~~~~~~~~~~~~~~~ 221 (578)
|...+...+..| +...|++.....+++.+..+....|
T Consensus 366 p~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 366 PLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred hHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999988877 9999999888887777766655444
No 147
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.23 E-value=5.3e-11 Score=125.50 Aligned_cols=158 Identities=20% Similarity=0.172 Sum_probs=122.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcc
Q 043156 30 LILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPC 109 (578)
Q Consensus 30 ~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~ 109 (578)
.+.....+.....+....+++.|+.+++|++..+.+++.+...++..++.++.|+++||+ |||+.+.++.++.....+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~ 320 (405)
T TIGR00891 242 YLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLIIP 320 (405)
T ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHHHH
Confidence 334444444555556667889999999999999999999999999999999999999998 9999998887655321111
Q ss_pred cccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 043156 110 NVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIV 189 (578)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~ 189 (578)
. .....+...+.+..++.++..+...+..++++.|.+|+++ |++.+|+.+...++|..++|.+.|
T Consensus 321 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~g~~~g~~~~g 385 (405)
T TIGR00891 321 V---------FAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ------RAAGLGFTYQLGNLGGALAPIIGA 385 (405)
T ss_pred H---------HHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch------hHHHhhHHHHHHHHHHHHHHHHHH
Confidence 1 0112344445555566666666667778889999999887 999999999999999999999999
Q ss_pred HhccccC-chhHHHH
Q 043156 190 WIQDNKG-WDRGFGL 203 (578)
Q Consensus 190 ~l~~~~g-~~~~f~i 203 (578)
++.++.| |+..|..
T Consensus 386 ~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 386 LLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHhccccchhHHh
Confidence 9999888 8776655
No 148
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.21 E-value=1.8e-10 Score=122.07 Aligned_cols=177 Identities=12% Similarity=0.051 Sum_probs=129.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhh-hhhhhhc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVL-ISGSVEF 104 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~-~~~~~~~ 104 (578)
|..+...+..++....+++...+.|.|++ ++|++..+.+.+.+.+.++..++.++.|+++||+ |||+.+. .+.+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~ 299 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCG 299 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHH
Confidence 34566667777788888888899998885 5899999999999999999999999999999998 9988764 2222222
Q ss_pred cCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHH
Q 043156 105 LPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAIS 184 (578)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~ 184 (578)
+..++.. ........+....++..++.|++.+...+. ...+.|..| ++ |++++++++...++|..++
T Consensus 300 ~~~~~l~-----~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~------~g~~~g~~~~~~~lg~~~g 366 (402)
T TIGR00897 300 IFTLALY-----YIPQHFGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KH------KGAAMSVLNLSAGLSAFLA 366 (402)
T ss_pred HHHHHHH-----HHHHccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-ch------hHHHHHHHHHHHHHHHHHH
Confidence 1111110 000011234455556677777777665443 455667654 44 9999999999999999999
Q ss_pred HHHHHHhccccCchhHHHHHHHHHHHHHHHHHh
Q 043156 185 VTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAA 217 (578)
Q Consensus 185 p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~ 217 (578)
|.+++++.+.+||+..|++.+++.+++.+...+
T Consensus 367 p~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 367 PAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988877666555443
No 149
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.21 E-value=1e-10 Score=125.11 Aligned_cols=170 Identities=12% Similarity=0.021 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCC
Q 043156 35 FGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDP 114 (578)
Q Consensus 35 ~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~ 114 (578)
.+.....+|++..++|.|+.+++|.+..+.+...+...++..++.++.|+++||+ |||+++.++.++..+......
T Consensus 252 ~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~--- 327 (432)
T PRK10406 252 TAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPIL--- 327 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHH---
Confidence 3344677888899999999999999999999988888888889999999999998 999988776554321111000
Q ss_pred CCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHH-HHHHHHHHHHHHhcc
Q 043156 115 TAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVC-IGGAISVTLIVWIQD 193 (578)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~-lG~~~~p~l~~~l~~ 193 (578)
.......+....+....+..++.+...+....+++|.+|++. |++++|+.+...+ +++..+|.+.+++..
T Consensus 328 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------r~t~~g~~~~~g~~~~g~~~p~~~~~l~~ 398 (432)
T PRK10406 328 ---SALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------RALGVGLSYAVANALFGGSAEYVALSLKS 398 (432)
T ss_pred ---HHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------cchhhhHHHHHHHHHHHhHHHHHHHHHHH
Confidence 000111122221111122222333334456678899999987 9999999776555 445568888887654
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHh
Q 043156 194 NKGWDRGFGLSSVAVFLATIIFAA 217 (578)
Q Consensus 194 ~~g~~~~f~i~~~~~~~~~~~~~~ 217 (578)
...|...++..++..+++.+..++
T Consensus 399 ~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 399 IGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred hCCCcHHHHHHHHHHHHHHHHHHH
Confidence 323666666655555555555444
No 150
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.20 E-value=1.4e-10 Score=126.33 Aligned_cols=150 Identities=21% Similarity=0.160 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCcccccc
Q 043156 44 ALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEG 123 (578)
Q Consensus 44 ~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (578)
....++|.|+++++|++..+++++.+...++..++.+++|+++||+ |||+++.++.++..+..++. . ....
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~-------~-~~~~ 363 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPV-------F-AIGG 363 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHH-------h-hccc
Confidence 3457889999889999999999999999999999999999999998 99999888766554332221 0 0112
Q ss_pred chhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHHH
Q 043156 124 SDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGL 203 (578)
Q Consensus 124 ~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i 203 (578)
.+.....+..++.+.......+..++++.|.+|+++ |++.+++++...++|..++|.++|++.+.+||+..+.+
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~ 437 (496)
T PRK03893 364 ANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------RAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALAS 437 (496)
T ss_pred cHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------hhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHH
Confidence 233333333343333333345667788899999876 99999999999999999999999999999999988766
Q ss_pred HHHHH
Q 043156 204 SSVAV 208 (578)
Q Consensus 204 ~~~~~ 208 (578)
.+...
T Consensus 438 ~~~~~ 442 (496)
T PRK03893 438 LSFSL 442 (496)
T ss_pred HHHHH
Confidence 55443
No 151
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.20 E-value=7.8e-10 Score=112.69 Aligned_cols=364 Identities=14% Similarity=0.030 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHhcCC---CH----HHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc-CCcccccCCCC
Q 043156 45 LGVNLVTYFNGVLHL---DL----AEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL-PPPCNVFDPTA 116 (578)
Q Consensus 45 ~~~~l~~yl~~~lg~---s~----~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~-~~~~~~~~~~~ 116 (578)
...++|+|+++..+- +. +..+...++..+...+..|+-|.++|+. |+||-..-.+....+ .+.++
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L------ 106 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLL------ 106 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHH------
Confidence 345688888887655 32 3456777778888889999999999998 888866544443332 22222
Q ss_pred CccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHH--HHh-c-
Q 043156 117 GCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLI--VWI-Q- 192 (578)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~--~~l-~- 192 (578)
........+....+...+..++.........+++.|..++++ -++..++-+....+|+.+.-+.. +.+ .
T Consensus 107 -~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~------~~riS~lg~~~gylgs~i~li~~~~~~~~~~ 179 (438)
T COG2270 107 -WFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN------MGRISGLGWALGYLGSVILLIFVVLGFALGQ 179 (438)
T ss_pred -HHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc------cCcccccccccccccchHHHHHHHHHHhccc
Confidence 111111355556667777888888888889999999999887 34444444445555555543332 111 1
Q ss_pred --------------cccCchhHHHHHHHHHHHHHHHHHhcCCCceec-CCCCcchHHHHHHHHHHHHHhcccCCCCCchh
Q 043156 193 --------------DNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQ-VVQGSSVLIEIIQVYVAAIRNRKLELPEDPME 257 (578)
Q Consensus 193 --------------~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (578)
+...-|..+.++++-.++..+=.++..++.++. .|.. +.+.. .
T Consensus 180 ~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~~~-~~l~~-------g-------------- 237 (438)
T COG2270 180 QTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKISSPPP-TALRN-------G-------------- 237 (438)
T ss_pred ccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhcccccccccccch-HHHHH-------H--------------
Confidence 112235555555444333222222211111110 0000 00000 0
Q ss_pred hhhhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhh--hHHHHHhHHHHHHHHHHHHHh
Q 043156 258 LYEINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVE--NAKIILGMIPIFCCTIVMTLC 335 (578)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~k~~~~~~~~~~~~~~~~~~ 335 (578)
+-+. ..+..+ .+|.+++ +...-.++..
T Consensus 238 ------------------------~k~L-----------------------~~t~k~i~~~~~i~~----FLiA~~~~~D 266 (438)
T COG2270 238 ------------------------FKEL-----------------------KSTFKEIRGRKNLVL----FLIARFFYID 266 (438)
T ss_pred ------------------------HHHH-----------------------HHHHHHHhcccchHH----HHHHHHHHHh
Confidence 0000 000000 1111111 1111111111
Q ss_pred h-hccc---hhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHH
Q 043156 336 L-AQLQ---TFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLS 411 (578)
Q Consensus 336 ~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~ 411 (578)
- +... +.+-.. +.++. ...-..+.....+..++++.+.+++-+|++.| +.+.+|+++.
T Consensus 267 Gv~til~~~~~fg~~----~~gls---~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k-----------~vl~~~lvi~ 328 (438)
T COG2270 267 GVNTILAMGGVFGAA----DLGLS---STELLLIGIALSVVAALGAIIAGFLDERFGSK-----------PVLMIGLVIL 328 (438)
T ss_pred hHHHHHHHHHHHHHH----HcCcc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----------eeehHHHHHH
Confidence 0 0000 111110 11110 00111222233345556666667666555555 3455666665
Q ss_pred HHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHH
Q 043156 412 CISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWC 491 (578)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~ 491 (578)
.+..+...+.+ .+..+ ...-++.++..+..+..+=++..+.+|++..|+..|++++
T Consensus 329 ~~~~~~~~~~~---------------------~~~~f---~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyal 384 (438)
T COG2270 329 SIAALYLIFLE---------------------GELDF---WILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYAL 384 (438)
T ss_pred HHHHHHHHHcc---------------------ccHHH---HHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhh
Confidence 54443333322 11122 2223667788888888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhcc
Q 043156 492 SMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSS 554 (578)
Q Consensus 492 ~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 554 (578)
....++.+||.+++.+.+.|.+ -+..+....++.++++++.+....
T Consensus 385 tgra~S~~gp~lv~v~t~iTg~-----------------~r~g~~~i~vll~iGl~~L~~v~~ 430 (438)
T COG2270 385 TGRAASFLGPFLVAVITQITGS-----------------SRAGVLSIIVLLLIGLLLLLRVKV 430 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHhcc-----------------hhhHHHHHHHHHHhhHhhEEeecC
Confidence 9999999999999999876621 234566777777777777766543
No 152
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.20 E-value=2.4e-10 Score=117.43 Aligned_cols=178 Identities=17% Similarity=0.090 Sum_probs=140.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhc
Q 043156 25 IKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEF 104 (578)
Q Consensus 25 ~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~ 104 (578)
.+.++..+...++...+.|...+|+.+++++..|+|.+..+++...|.++..++.+++|+++|| +.|+++.....+..
T Consensus 210 ~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a 287 (394)
T COG2814 210 RPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLA 287 (394)
T ss_pred CchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHH
Confidence 3456677778888889999999999999999999999999999999999999999999999999 78888887766666
Q ss_pred cCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHH
Q 043156 105 LPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAIS 184 (578)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~ 184 (578)
+..+.+ .....+.....+..++.++..+........-+++..| ++ ++.+.+++....|+|...|
T Consensus 288 ~~~l~l---------~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p-~~------~~~a~sl~~aa~nlgia~G 351 (394)
T COG2814 288 LALLAL---------TFTGASPALALALLFLWGFAFSPALQGLQTRLARLAP-DA------ADLAGSLNVAAFNLGIALG 351 (394)
T ss_pred HHHHHH---------HHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccCC-Cc------hHHHHHHHHHHHHHHHHHH
Confidence 443332 1223444555555555666655544444555555333 33 7999999999999999999
Q ss_pred HHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCC
Q 043156 185 VTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLP 220 (578)
Q Consensus 185 p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~ 220 (578)
..++|.+.+++|+....++.++..++++++.+...+
T Consensus 352 A~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 352 AALGGLVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998888777665444
No 153
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.20 E-value=1.4e-09 Score=111.01 Aligned_cols=86 Identities=17% Similarity=0.089 Sum_probs=72.2
Q ss_pred cchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccc--------
Q 043156 123 GSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDN-------- 194 (578)
Q Consensus 123 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~-------- 194 (578)
..++..++++.++.|.|.+...++.++++++..|+++ +++.+++......+|..++|.+++.+...
T Consensus 7 ~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~ 80 (310)
T TIGR01272 7 QRYYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQ 80 (310)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhh
Confidence 4678889999999999999999999999999999876 89999999999999999999999977631
Q ss_pred --------cCchhHHHHHHHHHHHHHHH
Q 043156 195 --------KGWDRGFGLSSVAVFLATII 214 (578)
Q Consensus 195 --------~g~~~~f~i~~~~~~~~~~~ 214 (578)
.+|++++++.+.+.++..++
T Consensus 81 ~~~~~~~~~~~~~~yl~ia~~~~~~~i~ 108 (310)
T TIGR01272 81 VATANAEAAKVHTPYLLLAGALAVLAII 108 (310)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36889988666554444333
No 154
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.18 E-value=2.8e-11 Score=130.40 Aligned_cols=172 Identities=19% Similarity=0.055 Sum_probs=133.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhc-cchhhhhhhhhhhh-
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAF-IGRFKAVLISGSVE- 103 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~-~Grr~~~~~~~~~~- 103 (578)
|..+..+...++..+.++....+++.|++ ++|++..+++.+.+...++..++.+++|+++||. .++|+...++....
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 319 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAK-DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLF 319 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHH
Confidence 34566666677777788888888999986 5799999999999999999999999999999983 14444443332222
Q ss_pred -ccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHH
Q 043156 104 -FLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGA 182 (578)
Q Consensus 104 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~ 182 (578)
.++.++. ....+.+.+++.+++.|++.+...+...+++.|.+|+++ |++.+++++...++|..
T Consensus 320 ~~l~~ll~----------~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~lg~~ 383 (455)
T TIGR00892 320 NGLTHLLC----------ALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR------FSSAVGLVTIVECCAVL 383 (455)
T ss_pred HHHHHHHH----------HHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH------HhhHHhHHHHHHHHHHH
Confidence 2211111 223566677788999999999999999999999999876 99999999999999999
Q ss_pred HHHHHHHHhcccc-CchhHHHHHHHHHHHHHHH
Q 043156 183 ISVTLIVWIQDNK-GWDRGFGLSSVAVFLATII 214 (578)
Q Consensus 183 ~~p~l~~~l~~~~-g~~~~f~i~~~~~~~~~~~ 214 (578)
+||.++|++.+.. +|+..|++.+++.+++.+.
T Consensus 384 igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 384 IGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred ccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 9999999998877 5999999988776665543
No 155
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.15 E-value=2.5e-10 Score=122.69 Aligned_cols=162 Identities=16% Similarity=0.045 Sum_probs=114.4
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCcccccc----c
Q 043156 49 LVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEG----S 124 (578)
Q Consensus 49 l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 124 (578)
...++.+++|++..+.++......++..++.+++|+++||+ |||+.+.+++++..++.++..+ ........ .
T Consensus 306 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 381 (481)
T TIGR00879 306 YSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGI---LGASFVTGSSKSS 381 (481)
T ss_pred HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHH---HhhcccCCcccch
Confidence 33455567899998889999999999999999999999998 9999998887766644333200 00000000 0
Q ss_pred hhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHHHH
Q 043156 125 DAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGLS 204 (578)
Q Consensus 125 ~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i~ 204 (578)
+...+....+..+.......+....++.|.+|+++ |++++++.+...++|.+++|.+.+++.++.+|++.|++.
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~ 455 (481)
T TIGR00879 382 GNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSL------RPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFF 455 (481)
T ss_pred hHHHHHHHHHHHHHHHccccCeehhhhhccCChHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhH
Confidence 22222222222222222334666777899999886 999999999999999999999999998888999999988
Q ss_pred HHHHHHHHHHHHhcCC
Q 043156 205 SVAVFLATIIFAAGLP 220 (578)
Q Consensus 205 ~~~~~~~~~~~~~~~~ 220 (578)
+++.+++.+..++..+
T Consensus 456 ~~~~~~~~i~~~~~~~ 471 (481)
T TIGR00879 456 GGLNVLGLIFVYFFLP 471 (481)
T ss_pred HHHHHHHHHHHheecc
Confidence 8777666665554433
No 156
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.15 E-value=1.1e-09 Score=116.48 Aligned_cols=359 Identities=16% Similarity=0.127 Sum_probs=207.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHHHHHH----HHHHHHHHhHHHHHhhhccchhhhhhhhh
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLA-EAANQVTNY----MGTSYILSIVVALLADAFIGRFKAVLISG 100 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~-~~~~~~~~~----~~~~~~~~~~~G~laD~~~Grr~~~~~~~ 100 (578)
+.+....+...+....-+....+...+.....+.+.. ..+...... .+...+..+.-|.++||+ |||..+.+.+
T Consensus 21 ~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~ 99 (463)
T KOG2816|consen 21 RHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLPL 99 (463)
T ss_pred hHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHHH
Confidence 3444444444444333333335555565555544332 233444444 577888999999999998 9999999999
Q ss_pred hhhccCCcccccCCCCCccccccchhHHHHHHHHHHHH--hccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHH
Q 043156 101 SVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIAT--GTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVC 178 (578)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~--g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~ 178 (578)
+...++.+++ ... ..+ +++ +.++ +.+.......++++|....++ |...+++.+....
T Consensus 100 ~~~~l~~~~~----------~~~-~~~-~~~---~~~l~g~~~~~~s~~~a~vadis~~~~------R~~~~gll~~~~~ 158 (463)
T KOG2816|consen 100 FGTILPALCL----------LFQ-GYW-FFL---LLGLSGGFSAIFSVGFAYVADISSEEE------RSSSIGLLSGTFG 158 (463)
T ss_pred HHHHHhHHHH----------HHH-HHH-Hhh---hcccccchhhhhhhhhhheeeccchhH------HHHHHHHHHHHHH
Confidence 8888665554 111 122 222 3232 334566677899999999886 9999999999999
Q ss_pred HHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCceecCCCCcchHHHHHHHHHHHHHhcccCCCCCchhh
Q 043156 179 IGGAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYRFQVVQGSSVLIEIIQVYVAAIRNRKLELPEDPMEL 258 (578)
Q Consensus 179 lG~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (578)
.+..++|.+++.+.+..|.-.+|++..+..++..+...+..++-..++.+++.+ .....+.
T Consensus 159 ~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~-----------------~~~~~~~-- 219 (463)
T KOG2816|consen 159 AGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDAT-----------------LRELTPG-- 219 (463)
T ss_pred HHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccccc-----------------ccccCCC--
Confidence 999999999999999999999999999988887776666555433322211000 0000000
Q ss_pred hhhchhhhhhhhcccCCCCCccchhhHhhhhccCccccccccCCCCCccccchhhhhHHHHHhHHHHHHHHHHHHHhhhc
Q 043156 259 YEINMDKEAAIETEFLPHRDIFRFLDKAAIQKTSTENLEITEAPNPWKLCRVTQVENAKIILGMIPIFCCTIVMTLCLAQ 338 (578)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~ 338 (578)
...+.... ++++.... ...+|..+..+. ........-...
T Consensus 220 --------------~~~~~~~~----------------------~~~~~~~~--~~~~r~~l~l~l--~~~~~~~~~~~~ 259 (463)
T KOG2816|consen 220 --------------SLDSSHVA----------------------DAFQSLTK--VGPDRLLLLLLL--VAFLSSLPEAGG 259 (463)
T ss_pred --------------cccchhhh----------------------hhhhhhcc--cCCCccchHHHH--HHHHHHHHHhcC
Confidence 00000000 11110000 111111111111 111111111111
Q ss_pred cc---hhhhhhhccCCCCCCCceeeCCCcccCch----hHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHH
Q 043156 339 LQ---TFSIQQGLTMDTSVTTSFHIPPASLPILP----ILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLS 411 (578)
Q Consensus 339 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~ 411 (578)
.. .++.......+.. .-+.+.+.. .+..++..|+.... ++.| +.+..|++..
T Consensus 260 ~~~~~~~yl~~~f~w~~~-------~~s~~~~~~~~~~~i~~l~~~~~l~~~---l~~~-----------~~i~lGl~~~ 318 (463)
T KOG2816|consen 260 ASDVLLLYLKAKFGWNKK-------EFSDLLSLVSILGIISQLLLLPLLSSI---LGEK-----------RLISLGLLSE 318 (463)
T ss_pred ceeEEEEEEeeecCcCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH---Hhhh-----------hHhhHHHHHH
Confidence 11 1222221111111 111122222 23333333333222 2333 3677899999
Q ss_pred HHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHH
Q 043156 412 CISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWC 491 (578)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~ 491 (578)
.+++.+.++.+ .. |+...............|...+++..++.++.+|...++...
T Consensus 319 ~~~~~~~af~~------------------------~~-w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~ 373 (463)
T KOG2816|consen 319 FLQLLLFAFAT------------------------ET-WMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISG 373 (463)
T ss_pred HHHHHHHHHhc------------------------cc-hhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHH
Confidence 99999988865 22 233333444555567789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccc
Q 043156 492 SMALGYFFSTILVNIVNSAT 511 (578)
Q Consensus 492 ~~~ig~~lg~~~~~~~~~~~ 511 (578)
...+.+.+++.+.+.+...|
T Consensus 374 i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 374 IEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred HHHHhhhhhHHHHHHHHHHH
Confidence 99999999999888776544
No 157
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.15 E-value=7.5e-10 Score=120.00 Aligned_cols=173 Identities=13% Similarity=0.070 Sum_probs=115.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhh-------hhhhhh
Q 043156 28 SLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFK-------AVLISG 100 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~-------~~~~~~ 100 (578)
.|.+.+..++.....+....+++.|+.+++|++..+++.+.+.+.++..++.+++|+++||+ |||+ ...+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~~ 332 (476)
T PLN00028 254 TWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIVQ 332 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHHH
Confidence 45555555555555566677889999999999999999999999999999999999999997 8762 221222
Q ss_pred hhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHH
Q 043156 101 SVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIG 180 (578)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG 180 (578)
++..+..++. ....+.....+..++.+++.+...+...+++.+..| ++ |+...++.+.+.++|
T Consensus 333 ~l~~i~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~g~~~~~g~lg 395 (476)
T PLN00028 333 TLGGVFCIWL----------GRANSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RS------LGVISGLTGAGGNVG 395 (476)
T ss_pred HHHHHHHHHh----------cccchHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hh------chhhhhhhhccccHH
Confidence 2211111111 222333444444455555555445555666667655 34 899999988877888
Q ss_pred HHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcC
Q 043156 181 GAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGL 219 (578)
Q Consensus 181 ~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~ 219 (578)
+.++|.+.+ .....+|+..|++.+++.+++.++.++.+
T Consensus 396 ~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 396 AVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 887776654 22345699999998888777776665554
No 158
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.12 E-value=6.6e-10 Score=120.80 Aligned_cols=179 Identities=14% Similarity=0.102 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH-HHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCC
Q 043156 29 LLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVT-NYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPP 107 (578)
Q Consensus 29 ~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~-~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~ 107 (578)
+.+....++.....+....+.+.|+.+++|+|.++.+++.. ...++..++.+++|+++||+ ||||.+.++.++.++..
T Consensus 225 ~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~~ 303 (491)
T PRK11010 225 WLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVSN 303 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence 33333344555555556677888888889999999999985 55679999999999999998 99998876655444222
Q ss_pred cccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 043156 108 PCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTL 187 (578)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l 187 (578)
++.. .......+...+.+..++..+..|...++..++..+..+++. +++.+++.+...++|..+++.+
T Consensus 304 l~~~------~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~------~~t~~gl~~s~~~lg~~~~~~~ 371 (491)
T PRK11010 304 AGYW------LLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF------SATQFALLSALSAVGRVYVGPV 371 (491)
T ss_pred HHHH------HHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHHHHHHHHHHHHHHHH
Confidence 1110 000111233333444445444445555666788888888876 7889999999999999989899
Q ss_pred HHHhccccCchhHHHHHHHHHHHHHHHHHhcCC
Q 043156 188 IVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLP 220 (578)
Q Consensus 188 ~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~ 220 (578)
+|++.+.+||+..|.+.+++.+.+++.....++
T Consensus 372 ~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 372 AGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999888888777766665543
No 159
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.11 E-value=4.1e-10 Score=118.77 Aligned_cols=174 Identities=12% Similarity=-0.020 Sum_probs=122.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HHHHHHhHHHHHhhhccchhhhhhhhhhhhccC
Q 043156 28 SLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMG-TSYILSIVVALLADAFIGRFKAVLISGSVEFLP 106 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~-~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~ 106 (578)
.+..+...++...+.....++.+.|+.+ .|++.++.|++...... ...++.+++|+++||+ |+||++.++.++....
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 287 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGSL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHH
Confidence 4445555556666666667788888865 79999999999888764 5667789999999998 9999998876655221
Q ss_pred CcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCC-CChHHHhhhhhHHHHHHHHHHHHHHHHH
Q 043156 107 PPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDE-KDPIEARQMSSFFNLLFLAVCIGGAISV 185 (578)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~-~~~~~~~~R~~~~~~~~~~~~lG~~~~p 185 (578)
.+... .........+....+....+.+++.+...+...+.+.+..++ +. +++.+++++...++|..++|
T Consensus 288 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~lg~~~g~ 357 (390)
T TIGR02718 288 ALLWF----AQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQ------AGTDVTAVQSTRDLGELIAS 357 (390)
T ss_pred HHHHH----HHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc------hHHHHHHHHHHHHHHHHHHH
Confidence 11110 000000012233333444455566676666666776676665 44 89999999999999999999
Q ss_pred HHHHHhccccCchhHHHHHHHHHHHHHH
Q 043156 186 TLIVWIQDNKGWDRGFGLSSVAVFLATI 213 (578)
Q Consensus 186 ~l~~~l~~~~g~~~~f~i~~~~~~~~~~ 213 (578)
.++|++.+..||+..|.+.+++.+++.+
T Consensus 358 ~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 358 SIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 9999999989999999887776655543
No 160
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.11 E-value=1.1e-09 Score=115.35 Aligned_cols=169 Identities=14% Similarity=-0.000 Sum_probs=130.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
|..+..++..++....+.....+.+.|+. +.|.+..+.+.+.+...++..+..++.|++.||+ |+|+.+.++.+...+
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVV 282 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHH
Confidence 44555555566666666667788888985 5899999999999988889999999999999998 999999988887775
Q ss_pred CCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHH-HHHHHHHHHH
Q 043156 106 PPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLF-LAVCIGGAIS 184 (578)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~-~~~~lG~~~~ 184 (578)
..++. ...++.+.+++..++.|++.+...+....++.+. ++++ +++..+.+. ....+|..+|
T Consensus 283 ~~~~~----------~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~g~~ig 345 (382)
T PRK11128 283 RWGLM----------GSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIRLQALYSALAMGGSIAIM 345 (382)
T ss_pred HHHHH----------HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHHHHHHHHHHHHHHHHHHH
Confidence 43332 3346777778888999999998888888888776 4443 678888875 5567888999
Q ss_pred HHHHHHhccccCchhHHHHHHHHHHHHHHH
Q 043156 185 VTLIVWIQDNKGWDRGFGLSSVAVFLATII 214 (578)
Q Consensus 185 p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~ 214 (578)
|.++|++.+.+|+ ..|+..+++.+.+++.
T Consensus 346 ~~i~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 346 TVLSGFLYQHLGA-GVFWVMALVALPALFI 374 (382)
T ss_pred HHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 9999999998887 4666666655555443
No 161
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.10 E-value=4.5e-10 Score=119.39 Aligned_cols=165 Identities=10% Similarity=-0.011 Sum_probs=116.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhh-hhhhhhhh
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNG-VLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKA-VLISGSVE 103 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~-~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~-~~~~~~~~ 103 (578)
+..+......++....++++..++|.|+++ ..|.+..+++.......++..++.+++|+++||+ |||+. .....+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~ 320 (412)
T TIGR02332 242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFA 320 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHH
Confidence 346667777788888899999999999976 3577888999999999999999999999999998 87774 33333333
Q ss_pred ccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHH
Q 043156 104 FLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAI 183 (578)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~ 183 (578)
.++..+. . . ..+.........+.++|.....+.......|.+|+++ |++++++.+...++|+++
T Consensus 321 ~~~~~~~-------~--~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~a~g~~~~~~~~g~~~ 384 (412)
T TIGR02332 321 AAGWLLA-------S--A-TDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQA------RAIAIAVINATGNIGSAL 384 (412)
T ss_pred HHHHHHH-------H--h-cCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHH------HHHHHHHHHHhhhhhhhh
Confidence 3222111 0 1 1111111222223333333333344455577788776 999999999999999999
Q ss_pred HHHHHHHhccccC-chhHHHHHHHH
Q 043156 184 SVTLIVWIQDNKG-WDRGFGLSSVA 207 (578)
Q Consensus 184 ~p~l~~~l~~~~g-~~~~f~i~~~~ 207 (578)
+|.+.|.+.+..| |+..|++.++.
T Consensus 385 ~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 385 SPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred hhhhcccccccCCCCchhHHHHHHH
Confidence 9999999998775 99998876654
No 162
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.10 E-value=9.5e-10 Score=116.62 Aligned_cols=174 Identities=11% Similarity=-0.084 Sum_probs=124.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccC
Q 043156 27 TSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLP 106 (578)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~ 106 (578)
.++...+...+....++......|.|+.+++|++..+.++......++..++.++.|+++||+ |||+.+.++.++..++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g 294 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAG 294 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 345555555555555555666778888889999999999888888888899999999999998 9999998887766644
Q ss_pred CcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 043156 107 PPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVT 186 (578)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~ 186 (578)
.++..+ .......+...++++.++.++|.+...+......... ++++ |++..+.++....+|..+|+.
T Consensus 295 ~~~~~~-----~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~------~g~~~~~~~~~~~~~~~~g~~ 362 (406)
T PRK15402 295 LLLAAL-----ATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVS------KGTVSAAMGMLSMLIFTVGIE 362 (406)
T ss_pred HHHHHH-----HHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-cccc------ccHHHHHHHHHHHHHHHHHHH
Confidence 433200 0001123455566778888888887777655544433 3344 899999999999999999999
Q ss_pred HHHHhccccCchhHHHHHHHHHHHHHH
Q 043156 187 LIVWIQDNKGWDRGFGLSSVAVFLATI 213 (578)
Q Consensus 187 l~~~l~~~~g~~~~f~i~~~~~~~~~~ 213 (578)
+++++.+..++....+..++..++.++
T Consensus 363 ~~~~l~~~~~~~~~~~~~~~~~~~~~~ 389 (406)
T PRK15402 363 LSKHAYLGGGNGLFNLFNLANGLLWLL 389 (406)
T ss_pred HHHhcccCCchHHHHHHHHHHHHHHHH
Confidence 999998877766555554444444333
No 163
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.10 E-value=1.1e-09 Score=117.49 Aligned_cols=184 Identities=18% Similarity=0.126 Sum_probs=149.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchh--hhhhhhhhh
Q 043156 25 IKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRF--KAVLISGSV 102 (578)
Q Consensus 25 ~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr--~~~~~~~~~ 102 (578)
.|.+...+++.++-+-+...+......|.++++|++..+...+.....+.+.++.++.|++.||+ |.| +++++++++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~~ 358 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLIL 358 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHH
Confidence 46677778888888888899999999999999999999999999999999999999999999998 999 898888877
Q ss_pred hccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHH
Q 043156 103 EFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGA 182 (578)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~ 182 (578)
+.+-.+...+ +..... ....+.+.+++.-++.|+..|...+..-++.+|+.|+++ .+..+|++.......+.
T Consensus 359 ~~~i~~~g~~-G~~~~~-~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~------e~efFgly~i~gk~ss~ 430 (477)
T PF11700_consen 359 WIIIPLYGLF-GFWPSF-FGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR------EAEFFGLYAITGKASSW 430 (477)
T ss_pred HHHHHHHHHH-Hhhhcc-cCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch------hhHHHHHHHHHHHHHHH
Confidence 7421111000 000000 112455667777788999999999999999999999987 79999999999999999
Q ss_pred HHHHHHHHhccccC-chhHHHHHHHHHHHHHHHHHh
Q 043156 183 ISVTLIVWIQDNKG-WDRGFGLSSVAVFLATIIFAA 217 (578)
Q Consensus 183 ~~p~l~~~l~~~~g-~~~~f~i~~~~~~~~~~~~~~ 217 (578)
+||.+.|.+.+..| -|+.+....+..++++++++.
T Consensus 431 lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 431 LGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred HHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Confidence 99999999988776 888888777777777766544
No 164
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.09 E-value=3.1e-10 Score=121.73 Aligned_cols=179 Identities=15% Similarity=0.079 Sum_probs=120.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhc-
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEF- 104 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~- 104 (578)
+..+...+..++.....+++..++|.|+++..|++..+++++...+.+++.++.+++|+++||+ |+++....+.....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~ 329 (438)
T TIGR00712 251 KLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTL 329 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHH
Confidence 3456666666676777788889999999998999999999999999999999999999999997 76543333322211
Q ss_pred --cCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHH-
Q 043156 105 --LPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGG- 181 (578)
Q Consensus 105 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~- 181 (578)
++.++. ......+........++.|++.............|.+|+++ |+++.|+.+...++|+
T Consensus 330 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~gg~ 395 (438)
T TIGR00712 330 VTIAVIVY--------WMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGFTGLFGYLGGS 395 (438)
T ss_pred HHHHHHHH--------HhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh------eeeehhhhchHHHhhhh
Confidence 111110 00111222222333333343322111122345678999876 9999999988888874
Q ss_pred HHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcC
Q 043156 182 AISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGL 219 (578)
Q Consensus 182 ~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~ 219 (578)
+++|.+.|++.++.||...|++.++..+++.+..++..
T Consensus 396 ~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 433 (438)
T TIGR00712 396 VAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM 433 (438)
T ss_pred hhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999988999999887776666555544433
No 165
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.09 E-value=4.9e-10 Score=107.38 Aligned_cols=174 Identities=15% Similarity=0.100 Sum_probs=129.2
Q ss_pred CcccccccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhh
Q 043156 15 RPAVKYKHGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFK 94 (578)
Q Consensus 15 ~~~~~~~~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~ 94 (578)
.|..+..+.+....|.+..+.+......+=..+.-+.++++.+|+|+..++.+.+.........+++.|.++|++ ||+.
T Consensus 253 ~pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~ 331 (459)
T KOG4686|consen 253 EPKLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNL 331 (459)
T ss_pred CcccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-ccee
Confidence 355555667777788888877777666666667788999999999999999999999999999999999999998 9998
Q ss_pred hhhhhhhhhc-cCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHH
Q 043156 95 AVLISGSVEF-LPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLL 173 (578)
Q Consensus 95 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~ 173 (578)
..+.+..+.. .+...+ . .+...=+++..++|+...+...+..+.++...|+++ .+++++..
T Consensus 332 ~wv~~a~~~tl~~H~~l----------~--Ft~lsPy~~m~~lGLsysllAcslWP~va~~vpE~q------LGTaygf~ 393 (459)
T KOG4686|consen 332 WWVASACILTLLGHSGL----------F--FTFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQ------LGTAYGFI 393 (459)
T ss_pred hhHHHHHHHHHHHhhhH----------H--hhhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHH------hcchHHHH
Confidence 8877765555 222221 1 111112345556666665555555666777788776 99999999
Q ss_pred HHHHHHHHHHHHHHHHHhccccC---chhHHHHHHHH
Q 043156 174 FLAVCIGGAISVTLIVWIQDNKG---WDRGFGLSSVA 207 (578)
Q Consensus 174 ~~~~~lG~~~~p~l~~~l~~~~g---~~~~f~i~~~~ 207 (578)
+...|+|-++.|+++|.+.++-| |--.|++....
T Consensus 394 qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~ 430 (459)
T KOG4686|consen 394 QSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGL 430 (459)
T ss_pred HHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHH
Confidence 99999999999999999988644 43345444333
No 166
>PRK10504 putative transporter; Provisional
Probab=99.08 E-value=1.3e-09 Score=117.85 Aligned_cols=157 Identities=15% Similarity=-0.009 Sum_probs=120.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccC
Q 043156 27 TSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLP 106 (578)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~ 106 (578)
.....+...++...++.....+.+.|++..+|.+..+++++.....++..++.++.|+++||+ |||+++.++.++..++
T Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~ 340 (471)
T PRK10504 262 TFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLALV 340 (471)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHH
Confidence 344555566666666665556778888888999999999999888888888889999999998 9999998887766644
Q ss_pred CcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 043156 107 PPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVT 186 (578)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~ 186 (578)
.++.. ......+...+.+..++.|++.+...+....++.+..|+++ |+.++++.+....+|..+|+.
T Consensus 341 ~~~~~-------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~ig~~ 407 (471)
T PRK10504 341 SLLFM-------LVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL------ASSGNSLLSMIMQLSMSIGVT 407 (471)
T ss_pred HHHHH-------hccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh------ccchHHHHHHHHHHHHHHHHH
Confidence 33320 00112233334455667788888888888889999999876 999999999999999999999
Q ss_pred HHHHhccccCc
Q 043156 187 LIVWIQDNKGW 197 (578)
Q Consensus 187 l~~~l~~~~g~ 197 (578)
++|.+.+..|+
T Consensus 408 i~g~ll~~~g~ 418 (471)
T PRK10504 408 IAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHhhh
Confidence 99988765554
No 167
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.06 E-value=1.3e-09 Score=114.57 Aligned_cols=171 Identities=12% Similarity=0.017 Sum_probs=115.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCC
Q 043156 28 SLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPP 107 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~ 107 (578)
.+......++.....+....+++.|+.+.+|++..+.+.+.+...++..++.++.|+++||+ |+|+.+.++..+..++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~ 279 (382)
T PRK10091 201 PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHH
Confidence 34444444444455555567778899888999999999999999999999999999999998 99999988877666543
Q ss_pred cccccCCCCCccccccchhHHHHHHHHHHHHhccccccccc-cccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 043156 108 PCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALP-PYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVT 186 (578)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~-~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~ 186 (578)
++. . ...++.....+..++.++|.+...+... ....+..+++. ++.+ ..+...++|..+||.
T Consensus 280 ~~~--------~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~g~~~Gp~ 342 (382)
T PRK10091 280 LML--------F-FFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGEL------LGAA--GGQIAFNLGSAIGAY 342 (382)
T ss_pred HHH--------H-HHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchH------HHHH--HHHHHHHHHHHHHHH
Confidence 322 0 1122333344444455555544333323 33334333332 4433 346677999999999
Q ss_pred HHHHhccc-cCchhHHHHHHHHHHHHHHHHH
Q 043156 187 LIVWIQDN-KGWDRGFGLSSVAVFLATIIFA 216 (578)
Q Consensus 187 l~~~l~~~-~g~~~~f~i~~~~~~~~~~~~~ 216 (578)
++|++.+. .+|+..+.+.++..++......
T Consensus 343 ~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (382)
T PRK10091 343 CGGMMLTLGLAYNYVALPAALLSFAAMSSLL 373 (382)
T ss_pred HhHHHHHcccCcchHHHHHHHHHHHHHHHHH
Confidence 99999885 6799999988776555444433
No 168
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.04 E-value=1.8e-09 Score=110.06 Aligned_cols=162 Identities=14% Similarity=0.061 Sum_probs=120.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhh
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGV--LHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVE 103 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~--lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~ 103 (578)
|..+...+..++....--++..+.+.|+.+. +|++.++.+...+.+..+..++.+++++++||+ |+||++.++.++.
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l~ 218 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFLA 218 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHH
Confidence 3444444444444445556678899999854 799999999999999999999999999999998 9999998887766
Q ss_pred ccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHH
Q 043156 104 FLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAI 183 (578)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~ 183 (578)
+++.++. ....+.. ...+..+.|++.+..+|...+...+.+|++. +++.++. ....+|+++
T Consensus 219 ~~~~~l~----------~~~~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~-------~~asai~-~~~~~Gg~i 279 (310)
T TIGR01272 219 VLLSIGA----------ALTHGYV-AMWFVLALGLFNSIMFPTIFSLALNALGRHT-------SQGSGIL-CLAIVGGAI 279 (310)
T ss_pred HHHHHHH----------HHcCCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------hhhHHHH-HHHHhcchH
Confidence 6443322 1111222 2235557889999999999999989888653 4444554 566799999
Q ss_pred HHHHHHHhccccCchhHHHHHHHH
Q 043156 184 SVTLIVWIQDNKGWDRGFGLSSVA 207 (578)
Q Consensus 184 ~p~l~~~l~~~~g~~~~f~i~~~~ 207 (578)
.|.+.|++.+..|.+..|++..++
T Consensus 280 ~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 280 VPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HHHHHHHHHHhccchHHHHHHHHH
Confidence 999999999988988888765444
No 169
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.03 E-value=1.5e-09 Score=112.77 Aligned_cols=156 Identities=11% Similarity=0.026 Sum_probs=114.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
|..+.+.+..++....++....++|.|+++ .|+|..+.+.+.+.+.++..++.++.|+++||+-+||+++.++.++..+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 275 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLV 275 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHH
Confidence 345555556666677788888899999864 7999999999999999999999999999999972355566666665554
Q ss_pred CCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHH
Q 043156 106 PPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISV 185 (578)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p 185 (578)
+.+++ ....+.... ...++.|++.|...|...+.+.+..++++ +++..+++.+...++|..++|
T Consensus 276 ~~~~~----------~~~~~~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~gp 339 (355)
T TIGR00896 276 GLCGL----------LFAPMHGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAA-----QAAALSAMAQSIGYLLAALGP 339 (355)
T ss_pred HHHHH----------HHhhhhHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 43332 111111111 13456788998888877777766665443 378888998888899999999
Q ss_pred HHHHHhccccC-ch
Q 043156 186 TLIVWIQDNKG-WD 198 (578)
Q Consensus 186 ~l~~~l~~~~g-~~ 198 (578)
.+.|++.+++| |.
T Consensus 340 ~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 340 LFVGVLHDISGNWL 353 (355)
T ss_pred HHHHHHHHHhcccC
Confidence 99999988765 54
No 170
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.03 E-value=5.1e-10 Score=116.57 Aligned_cols=162 Identities=12% Similarity=0.124 Sum_probs=116.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhh-h-hhh
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLIS-G-SVE 103 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~-~-~~~ 103 (578)
|.++.+.+..++.....+.+..+.+.|+++++|++..+.+...+.+.++..++.++.|+++||..+||+..... . ...
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 295 (379)
T TIGR00881 216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALI 295 (379)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 44666667777777777788889999999999999999999999999999999999999999852333332211 1 111
Q ss_pred ccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHH
Q 043156 104 FLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAI 183 (578)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~ 183 (578)
..+.... ......+.....+..++.|+......+....++.|.+|+++ |+++.++++...++|..+
T Consensus 296 ~~~~~~~--------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~~ 361 (379)
T TIGR00881 296 IVSLLVY--------WLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA------AGTAAGFVGFFAYLGGIL 361 (379)
T ss_pred HHHHHHH--------hcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch------hHHHHHHHHHhhhhhhhh
Confidence 1111110 00112233334444455555444444555677899999887 999999999999999999
Q ss_pred HHHHHHHhccccCchhHH
Q 043156 184 SVTLIVWIQDNKGWDRGF 201 (578)
Q Consensus 184 ~p~l~~~l~~~~g~~~~f 201 (578)
+|.+.|++.+++||+..|
T Consensus 362 ~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 362 AGLPLGYLADGFGWAGAF 379 (379)
T ss_pred hhhhHHHHHHhhcccccC
Confidence 999999999999998754
No 171
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.03 E-value=1.2e-09 Score=113.35 Aligned_cols=154 Identities=13% Similarity=0.006 Sum_probs=124.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhc
Q 043156 26 KTSLLILAAFGFENLATIALG-VNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEF 104 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~-~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~ 104 (578)
|.++.++...++....+.... .+.|.|.++.+|.+..+.+.+.....++..++.++.|+++||+ |||+.+..+..+..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 288 (365)
T TIGR00900 210 PLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIG 288 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHH
Confidence 345555556666666666665 6777777777999999999999999999999999999999998 99999888766555
Q ss_pred cCCcccccCCCCCccccccc-hhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHH
Q 043156 105 LPPPCNVFDPTAGCKKIEGS-DAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAI 183 (578)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~ 183 (578)
++.++. .... +...+++..++.|++.+...+...+++.|.+|+++ |++.+++++...++|..+
T Consensus 289 ~~~~~~----------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~ 352 (365)
T TIGR00900 289 LAILVV----------GLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL------LGRVFGAQFSLSHAAWPL 352 (365)
T ss_pred HHHHHH----------HhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHHH
Confidence 433332 1122 36667788888999999999999999999999876 999999999999999999
Q ss_pred HHHHHHHhccccC
Q 043156 184 SVTLIVWIQDNKG 196 (578)
Q Consensus 184 ~p~l~~~l~~~~g 196 (578)
+|.++|++.+++|
T Consensus 353 g~~~~g~l~~~~g 365 (365)
T TIGR00900 353 GLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHcC
Confidence 9999999987653
No 172
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.02 E-value=2e-09 Score=113.84 Aligned_cols=170 Identities=14% Similarity=0.096 Sum_probs=124.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhc
Q 043156 28 SLLILAAFGFENLATIALGVNLVTYFNGVL---HLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEF 104 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~l~~yl~~~l---g~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~ 104 (578)
.+..++..+.....+.......+.|+.+.+ +.+....+.+.+...+...++.++.|++.||+ |||+.+.++.++..
T Consensus 217 ~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~~ 295 (396)
T TIGR00882 217 FWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIMS 295 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHH
Confidence 344444444444444445456778877665 55667788888888889999999999999998 99999998887776
Q ss_pred cCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHH-HHHHHHHHHHH
Q 043156 105 LPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNL-LFLAVCIGGAI 183 (578)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~-~~~~~~lG~~~ 183 (578)
+...+. ....+...+++..++.+++..........+..+..+++. |++..+. ++....+|..+
T Consensus 296 l~~~~~----------~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~at~~~~~~~~~~~lg~~~ 359 (396)
T TIGR00882 296 VRIIGS----------SFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL------SATIYLIGFQFAKQLAMIF 359 (396)
T ss_pred HHHHHH----------HhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce------EEEeehHHHHHHHHHHHHH
Confidence 543332 223456666777888888776655555566777777665 6776666 67889999999
Q ss_pred HHHHHHHhccccCchhHHHHHHHHHHHHHHH
Q 043156 184 SVTLIVWIQDNKGWDRGFGLSSVAVFLATII 214 (578)
Q Consensus 184 ~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~ 214 (578)
+|.++|++.+..||+..|.+.+++.++..+.
T Consensus 360 ~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 360 LSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 9999999999889999999988776555443
No 173
>TIGR00895 2A0115 benzoate transport.
Probab=99.01 E-value=1.1e-09 Score=114.83 Aligned_cols=148 Identities=16% Similarity=0.017 Sum_probs=114.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
+..+.+....++....++....+.+ ++.+++|.+..+.+...+...++..++.+++|+++||+ |||+......+....
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 327 (398)
T TIGR00895 250 RITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAVF 327 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHH
Confidence 3445555556666777777777777 77788999999999999999999999999999999998 998555443333222
Q ss_pred CCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHH
Q 043156 106 PPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISV 185 (578)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p 185 (578)
..++. ....+....++..++.|++.+...+...+++.|.+|+++ |++++++++...++|..++|
T Consensus 328 ~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~~g~ 391 (398)
T TIGR00895 328 AVLVG----------STLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI------RATGVGWAIGIGRLGAIIGP 391 (398)
T ss_pred HHHHH----------HHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 21111 112344556677788899999889999999999999876 99999999999999999999
Q ss_pred HHHHHh
Q 043156 186 TLIVWI 191 (578)
Q Consensus 186 ~l~~~l 191 (578)
.++|++
T Consensus 392 ~~~G~l 397 (398)
T TIGR00895 392 ILAGYL 397 (398)
T ss_pred HhHHhc
Confidence 999876
No 174
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.00 E-value=1.5e-08 Score=108.20 Aligned_cols=162 Identities=18% Similarity=0.125 Sum_probs=112.7
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhc--cc--hhhhhhhhhhhhccCCcccccCCCCCcccccc
Q 043156 48 NLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAF--IG--RFKAVLISGSVEFLPPPCNVFDPTAGCKKIEG 123 (578)
Q Consensus 48 ~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~--~G--rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (578)
....|+++++|+++++.....+...+--.+ -++.|.++|-+ .| ||.-++++.++.+...+.+. ......
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~------~~~~~~ 83 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLA------LLPASE 83 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHH------hccccc
Confidence 344688999999999988777766555444 45668999986 23 34444556555532222210 011122
Q ss_pred chhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHHH
Q 043156 124 SDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGL 203 (578)
Q Consensus 124 ~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i 203 (578)
.+.....+..++..+|......+.-+++.|....+. +.|+...+..+....+|.+++..++|.+.+..+++..|.+
T Consensus 84 ~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p----~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i 159 (433)
T PF03092_consen 84 SSAAIAVVLLFLASFGYAFADVAADALVVELARREP----ESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLI 159 (433)
T ss_pred chhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCC----chhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehH
Confidence 344555566677888888888889999999886553 1278888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCC
Q 043156 204 SSVAVFLATIIFAAGLP 220 (578)
Q Consensus 204 ~~~~~~~~~~~~~~~~~ 220 (578)
.++...+..+..++..+
T Consensus 160 ~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 160 SAALPLLMLIVALFLLE 176 (433)
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 88776655544444444
No 175
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.99 E-value=1.8e-09 Score=117.04 Aligned_cols=156 Identities=13% Similarity=0.051 Sum_probs=124.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
|..+...+..++..+.+++...++|.|+++.+|.+..++++......++..++.++.|++.||+ |||+.+.++.++..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~ 333 (485)
T TIGR00711 255 RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAV 333 (485)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHH
Confidence 3455556667777788888888999999999999999999999999999999999999999998 999999888877765
Q ss_pred CCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHH
Q 043156 106 PPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISV 185 (578)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p 185 (578)
+..+.. .......+...+....++.|+|.+...+.......+..|+++ |+++.++++...++|+.+|+
T Consensus 334 ~~~~~~------~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~ig~ 401 (485)
T TIGR00711 334 GFYWRA------FTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK------IARGSSLSNFTRQLGGSIGT 401 (485)
T ss_pred HHHHHh------ccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HhHHHHHHHHHHHHHHHHHH
Confidence 544320 001112344555666778899988877776777778888776 99999999999999999999
Q ss_pred HHHHHhccc
Q 043156 186 TLIVWIQDN 194 (578)
Q Consensus 186 ~l~~~l~~~ 194 (578)
.+.+.+.++
T Consensus 402 ~i~g~~~~~ 410 (485)
T TIGR00711 402 ALITTILTN 410 (485)
T ss_pred HHHHHHHHH
Confidence 999988764
No 176
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.98 E-value=4.9e-09 Score=111.75 Aligned_cols=147 Identities=20% Similarity=0.185 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccc
Q 043156 41 ATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKK 120 (578)
Q Consensus 41 ~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (578)
..+.+..+++.|+++ .|.+..+.+.+.+...++..++.++.|+++||+ |||+++..+.++..+..+.. . .
T Consensus 246 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~-------~-~ 315 (426)
T PRK12307 246 ANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPL-------F-R 315 (426)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHH-------H-H
Confidence 334456778888875 699999999999999999999999999999998 99999988876655332221 0 0
Q ss_pred cccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhH
Q 043156 121 IEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRG 200 (578)
Q Consensus 121 ~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~ 200 (578)
........+....+..+.+.....+..+.++.|.+|++. |++++|+.+...++|+.++|.+.|++.+++|+...
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~ 389 (426)
T PRK12307 316 IPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------RGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAA 389 (426)
T ss_pred HccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------HhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHH
Confidence 111122111111222222222334455678899999876 99999999999999999999999999998886654
Q ss_pred HHH
Q 043156 201 FGL 203 (578)
Q Consensus 201 f~i 203 (578)
.++
T Consensus 390 ~~~ 392 (426)
T PRK12307 390 LTF 392 (426)
T ss_pred HHH
Confidence 333
No 177
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.96 E-value=7.2e-09 Score=112.00 Aligned_cols=177 Identities=18% Similarity=0.029 Sum_probs=123.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhh--------h
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAV--------L 97 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~--------~ 97 (578)
+.+|...+..++....++.+..++|.|+++.+|.+..+.++..+...++..++.+++|+++||+ ++|+.. .
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~~ 339 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKIF 339 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHHH
Confidence 5578888888888889999999999999999999999999999999999999999999999997 655321 1
Q ss_pred hhhhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHH
Q 043156 98 ISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAV 177 (578)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~ 177 (578)
.+......+..+. +......+....++...+.+.+.+...+.......|..|. . ++...++.+...
T Consensus 340 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~------~g~~~g~~~~~~ 405 (465)
T TIGR00894 340 NGIGGLGPGIFAY-------ALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-F------LGFIKGITGLPG 405 (465)
T ss_pred HHHHHHHHHHHHH-------HHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-H------HHHHHHHHHHHH
Confidence 1111100000000 0001112233333334444444444455555555666664 3 899999999999
Q ss_pred HHHHHHHHHHHHHhcccc---CchhHHHHHHHHHHHHHHHHHh
Q 043156 178 CIGGAISVTLIVWIQDNK---GWDRGFGLSSVAVFLATIIFAA 217 (578)
Q Consensus 178 ~lG~~~~p~l~~~l~~~~---g~~~~f~i~~~~~~~~~~~~~~ 217 (578)
++|+.++|.+.|++.+.. +|+..|.+.++..+++.++...
T Consensus 406 ~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 406 FIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred HHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 999999999999987643 3888999888777776655544
No 178
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.96 E-value=6.2e-09 Score=110.58 Aligned_cols=188 Identities=7% Similarity=-0.068 Sum_probs=127.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
++.|.+.+..++..-+|.+...++|.|+++.+ +............+...+..|++|++|||+ |+||++.++.+...+
T Consensus 252 ~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i 328 (462)
T PRK15034 252 LHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAI 328 (462)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHH
Confidence 45788888888877777777778999988765 333333334455688999999999999998 999999988876664
Q ss_pred CCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCC----------ChH-----HHhhhhhHH
Q 043156 106 PPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEK----------DPI-----EARQMSSFF 170 (578)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~----------~~~-----~~~~R~~~~ 170 (578)
...... .........+...+.+..+...++.|.-..+...++.+.+|++ ..+ .+++-+...
T Consensus 329 ~~~~~~----l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ 404 (462)
T PRK15034 329 FSALLF----LTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAAL 404 (462)
T ss_pred HHHHHH----HHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHH
Confidence 332210 0001111234556666666666777777778888888888741 000 011245667
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccC-chhHHHHHHHHHHHHHHHHHhcCC
Q 043156 171 NLLFLAVCIGGAISVTLIVWIQDNKG-WDRGFGLSSVAVFLATIIFAAGLP 220 (578)
Q Consensus 171 ~~~~~~~~lG~~~~p~l~~~l~~~~g-~~~~f~i~~~~~~~~~~~~~~~~~ 220 (578)
|+......+|+.+-|.+.|+..+..| +...|++..+..+++.++.++...
T Consensus 405 G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~ 455 (462)
T PRK15034 405 GFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYG 455 (462)
T ss_pred HHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 78888889988899988777766544 888888888887777777666543
No 179
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.95 E-value=2.4e-09 Score=114.50 Aligned_cols=162 Identities=20% Similarity=0.126 Sum_probs=118.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
|..+.+++..++....++......+.|.+..++ +..+.+++.....++..++.++.|+++||+ |||+++.++.++..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 455566666777777766655555555555566 566777888888899999999999999998 999999998877765
Q ss_pred CCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChH-HHhhhhhHHHHHHHHHHHHHHHH
Q 043156 106 PPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPI-EARQMSSFFNLLFLAVCIGGAIS 184 (578)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~-~~~~R~~~~~~~~~~~~lG~~~~ 184 (578)
+.++.. ....+...+++..++.+++.+...+...++++|..|.++.+ .+++++..+++++...++|..++
T Consensus 300 ~~~~~~---------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg 370 (437)
T TIGR00792 300 GYLIFF---------FAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALA 370 (437)
T ss_pred HHHHHH---------HcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHH
Confidence 543320 11134455666777788999888888899999987633210 01136889999999999999999
Q ss_pred HHHHHHhccccCch
Q 043156 185 VTLIVWIQDNKGWD 198 (578)
Q Consensus 185 p~l~~~l~~~~g~~ 198 (578)
+.+.|++.+..||.
T Consensus 371 ~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 371 GFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHcCCC
Confidence 99999998776663
No 180
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.94 E-value=1.2e-07 Score=104.02 Aligned_cols=193 Identities=17% Similarity=0.183 Sum_probs=144.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhc
Q 043156 25 IKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEF 104 (578)
Q Consensus 25 ~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~ 104 (578)
.|.+..++....+....+.+......+.+.+.+++++++.|++.+.+-++..+...+..|.+-|. =|-|.+-+|+++++
T Consensus 95 ~k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~ 173 (735)
T KOG3626|consen 95 IKMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMG 173 (735)
T ss_pred cchHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHH
Confidence 35555555555555555557778888899999999999999999999999999999999999996 77777777777776
Q ss_pred cCCccccc-----CC-------------CC--------------Cccc---------cccc-hhHHHHHHHHHHHHhccc
Q 043156 105 LPPPCNVF-----DP-------------TA--------------GCKK---------IEGS-DAALLFVALYLIATGTAG 142 (578)
Q Consensus 105 ~~~~~~~~-----~~-------------~~--------------~~~~---------~~~~-~~~~~~~~~~l~g~g~g~ 142 (578)
++.++..+ .+ .. .+.. .... -+.+++.+.++.|+|...
T Consensus 174 lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tp 253 (735)
T KOG3626|consen 174 LGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATP 253 (735)
T ss_pred HHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCC
Confidence 55544321 00 00 0000 0011 233677899999999999
Q ss_pred cccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcc------------------ccC-chhHHHH
Q 043156 143 IKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQD------------------NKG-WDRGFGL 203 (578)
Q Consensus 143 ~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~------------------~~g-~~~~f~i 203 (578)
.+|...+++=|-..+++ -...+|+.+.+..+|+++|.++++++.+ +.| |...|++
T Consensus 254 i~tlGisYiDDnvk~~~------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi 327 (735)
T KOG3626|consen 254 IFTLGISYIDDNVKKKN------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLI 327 (735)
T ss_pred CccCCCccccccccccC------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHH
Confidence 99999999999888776 6889999999999999999999987742 123 7778888
Q ss_pred HHHHHHHHHHHHHhcCCCcee
Q 043156 204 SSVAVFLATIIFAAGLPLYRF 224 (578)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~ 224 (578)
++.+.++..+.++++.+..++
T Consensus 328 ~g~~~~~~a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 328 CGALLLFSAVPLFFFPKELPK 348 (735)
T ss_pred HHHHHHHHHHHHHhCcccCcc
Confidence 888888877777776555443
No 181
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.94 E-value=3.5e-09 Score=115.41 Aligned_cols=154 Identities=10% Similarity=-0.039 Sum_probs=124.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
|.........++....+++...+++.|+++.+|.|..++|.....+.++..++.+++|++.||+ |||+.+..+.++..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~ 337 (495)
T PRK14995 259 RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSAL 337 (495)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 3445555666677777788888899999999999999999999999999999999999999998 999998888777665
Q ss_pred CCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHH
Q 043156 106 PPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISV 185 (578)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p 185 (578)
+.+++ .......+........++.|+|.|...+.....+.+..|+++ ++.+.++++...++|..+|+
T Consensus 338 ~~~~l-------~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~lG~~~G~ 404 (495)
T PRK14995 338 SFYGL-------AMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK------AAAAGAIETMAYELGAGLGI 404 (495)
T ss_pred HHHHH-------HHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh------cchHHHHHHHHHHHHHHHHH
Confidence 54332 001122334445667788899999988888888888888776 99999999999999999999
Q ss_pred HHHHHhcc
Q 043156 186 TLIVWIQD 193 (578)
Q Consensus 186 ~l~~~l~~ 193 (578)
.+.+.+.+
T Consensus 405 ai~g~i~~ 412 (495)
T PRK14995 405 AIFGLLLS 412 (495)
T ss_pred HHHHHHHH
Confidence 99998865
No 182
>PRK10054 putative transporter; Provisional
Probab=98.94 E-value=3.9e-09 Score=111.56 Aligned_cols=173 Identities=12% Similarity=-0.059 Sum_probs=125.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhh
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNG--VLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVE 103 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~--~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~ 103 (578)
|..+...+..++..+.+.....+.+.|+.. +.+.+....+.+............++.|++.||+ |+|+.+.++.++.
T Consensus 206 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~ 284 (395)
T PRK10054 206 KALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCF 284 (395)
T ss_pred ceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHH
Confidence 344445455555555555444566666643 3455666778888888777777788899999998 9999998887766
Q ss_pred ccCCcccccCCCCCccccc-cchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHH
Q 043156 104 FLPPPCNVFDPTAGCKKIE-GSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGA 182 (578)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~ 182 (578)
.++..+. .. ..+...+.+..++.++|.+...|...+++.+..|++. |++.++... ...+|..
T Consensus 285 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~------~~~~~~~~~-~~~~G~~ 347 (395)
T PRK10054 285 VIGLVGF----------IFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM------KASYFSAQS-LGWLGAA 347 (395)
T ss_pred HHHHHHH----------HHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc------ceehHhHHH-HHHHHHH
Confidence 6554332 11 2345556667788899998888888899999999876 888888654 5668999
Q ss_pred HHHHHHHHhccccCchhHHHHHHHHHHHHHHHHH
Q 043156 183 ISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFA 216 (578)
Q Consensus 183 ~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~ 216 (578)
+||.++|++.++.|....|++.+....++.+..+
T Consensus 348 ~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 348 INPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999988888887666555554444
No 183
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.93 E-value=1.3e-10 Score=126.48 Aligned_cols=178 Identities=15% Similarity=0.112 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCcc
Q 043156 40 LATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCK 119 (578)
Q Consensus 40 ~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (578)
....+......+-+++.++++++++|++.+.+-++..+..++..|+++|. -|-|.+-+|.+++++|.++..+ |++...
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~l-Phf~~~ 93 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFAL-PHFLSG 93 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhc-cHhhcC
Confidence 55666666666788999999999999999999999999999999999996 7777777888888877666431 211100
Q ss_pred --------------------c---------------------cccchhHHHHHHHHHHHHhccccccccccccccCCCCC
Q 043156 120 --------------------K---------------------IEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEK 158 (578)
Q Consensus 120 --------------------~---------------------~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~ 158 (578)
. ....-...++++.++.|+|....++...+|+=|-.+++
T Consensus 94 ~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~ 173 (539)
T PF03137_consen 94 PYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKK 173 (539)
T ss_dssp ----------------------------------------------------------SSS-------------------
T ss_pred CCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccc
Confidence 0 00012467888999999999999999999999999988
Q ss_pred ChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccc---------------------cC-chhHHHHHHHHHHHHHHHHH
Q 043156 159 DPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDN---------------------KG-WDRGFGLSSVAVFLATIIFA 216 (578)
Q Consensus 159 ~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~---------------------~g-~~~~f~i~~~~~~~~~~~~~ 216 (578)
+ -....|+++.+..+|.++|.++++.+.+. .| |...|.+.+++.++..+-++
T Consensus 174 ~------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~ 247 (539)
T PF03137_consen 174 N------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLF 247 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred c------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7 68889999999999999999888766421 13 66777777777666665555
Q ss_pred hcCCCceec
Q 043156 217 AGLPLYRFQ 225 (578)
Q Consensus 217 ~~~~~~~~~ 225 (578)
.+.++.++.
T Consensus 248 ~FPk~lp~~ 256 (539)
T PF03137_consen 248 FFPKKLPGT 256 (539)
T ss_dssp ---------
T ss_pred cCCccCCCc
Confidence 555554443
No 184
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.92 E-value=1.1e-08 Score=111.12 Aligned_cols=168 Identities=14% Similarity=0.078 Sum_probs=138.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccc
Q 043156 32 LAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNV 111 (578)
Q Consensus 32 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~ 111 (578)
+...++..+....+...+|.+.++.+|.+....|++.+.+.++..++.++.+++.+|+ ++++.+..+.+++++..+.+
T Consensus 224 l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~~~l- 301 (524)
T PF05977_consen 224 LLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALALLLL- 301 (524)
T ss_pred HHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHHHHH-
Confidence 3333444444445556788899999999999999999999999999999999999997 99999888887777554443
Q ss_pred cCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 043156 112 FDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWI 191 (578)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l 191 (578)
+...+.+..++..++.|++.....+...+.+.+..|++. |+|.+++++...+.+..+|..+.|.+
T Consensus 302 ---------al~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~------~GRv~si~~~~~~g~~~lGsll~G~l 366 (524)
T PF05977_consen 302 ---------ALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWV------RGRVFSIYQMVFFGGMPLGSLLWGFL 366 (524)
T ss_pred ---------hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455677777788888899888888888888999999886 99999999999999999999999999
Q ss_pred ccccCchhHHHHHHHHHHHHHHHHH
Q 043156 192 QDNKGWDRGFGLSSVAVFLATIIFA 216 (578)
Q Consensus 192 ~~~~g~~~~f~i~~~~~~~~~~~~~ 216 (578)
.+.+|-+..+.++++..+++.++..
T Consensus 367 a~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 367 ADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888776655555443
No 185
>PRK10133 L-fucose transporter; Provisional
Probab=98.90 E-value=1.1e-08 Score=109.59 Aligned_cols=163 Identities=15% Similarity=0.093 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcc
Q 043156 31 ILAAFGFENLATIALGVNLVTYF-NGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPC 109 (578)
Q Consensus 31 l~~~~~~~~~~~~~~~~~l~~yl-~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~ 109 (578)
..+..++.....++...+.+.|+ ++.+|++..+++.....+.++..++.+++|+++||+ ||||++..+.++.+.+.++
T Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~~ 341 (438)
T PRK10133 263 AVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMALCLI 341 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHH
Confidence 34444555566666667888885 567899999999999999999999999999999998 9999988887665533322
Q ss_pred cccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 043156 110 NVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIV 189 (578)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~ 189 (578)
. ...++. ..+....+.|++.+..+|...+...|.+|++. +.+.++... ..+|+.++|.+.|
T Consensus 342 ~----------~~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~-------~~as~l~~~-~~~g~~~~~~i~G 402 (438)
T PRK10133 342 S----------AFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDT-------KYGSSFIVM-TIIGGGIVTPVMG 402 (438)
T ss_pred H----------HHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhh-------ccchhHHhH-HhccchHHHHHHH
Confidence 1 111122 12455677899999999999999999988643 555555543 4467888889999
Q ss_pred HhccccC-chhHHHHHHHHHHHHHH
Q 043156 190 WIQDNKG-WDRGFGLSSVAVFLATI 213 (578)
Q Consensus 190 ~l~~~~g-~~~~f~i~~~~~~~~~~ 213 (578)
++.+..| -+..|.+..++.+....
T Consensus 403 ~l~~~~g~~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 403 FVSDAAGNIPTAELIPALCFAVIFI 427 (438)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHH
Confidence 9988887 78888776665444433
No 186
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.90 E-value=6.3e-09 Score=113.63 Aligned_cols=170 Identities=12% Similarity=0.029 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHhHHHHHhhhccchhhhhhhh
Q 043156 32 LAAFGFENLATIALGVNLVTYFNGVLHLDLAEAAN------------QVTNYMGTSYILSIVVALLADAFIGRFKAVLIS 99 (578)
Q Consensus 32 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~------------~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~ 99 (578)
....+...+.+|++..+.|.+++ ++|++..+.+. ......++..++.+++++++||+ |||++++++
T Consensus 294 ~~~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~ 371 (502)
T TIGR00887 294 AGSWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMG 371 (502)
T ss_pred HHHHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHH
Confidence 33445556778888777888774 67886543221 12233445566788899999998 999999888
Q ss_pred hhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHH
Q 043156 100 GSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCI 179 (578)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~l 179 (578)
.++.++...++. .......+...+....+...++.....+....+.+|.+|++. |+++.++.+....+
T Consensus 372 ~~~~~~~~~~l~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~------R~~~~g~~~~~~~~ 439 (502)
T TIGR00887 372 FFILTVLFFVLG------FAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY------RSTAHGISAASGKA 439 (502)
T ss_pred HHHHHHHHHHHH------HHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhH------HHHHHHHHHHHhhh
Confidence 766654332220 000000111111111111222222344566777899999987 99999999999999
Q ss_pred HHHHHHHHHHHhccc----------cCchhHHHHHHHHHHHHHHHH
Q 043156 180 GGAISVTLIVWIQDN----------KGWDRGFGLSSVAVFLATIIF 215 (578)
Q Consensus 180 G~~~~p~l~~~l~~~----------~g~~~~f~i~~~~~~~~~~~~ 215 (578)
|++++|.+.+++.+. .++...|++.+++.+++.+..
T Consensus 440 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~ 485 (502)
T TIGR00887 440 GAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT 485 (502)
T ss_pred HHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHh
Confidence 999999999998763 344567777776666554443
No 187
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.89 E-value=3.1e-08 Score=104.67 Aligned_cols=166 Identities=8% Similarity=0.029 Sum_probs=119.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccC
Q 043156 27 TSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLP 106 (578)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~ 106 (578)
.++..+...+.....+++...+++.++.+++|++..+.+.+...+.++..++.++.|++.||. +|+..+ .+..+....
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~~l~-~~~~~~~~~ 294 (394)
T PRK10213 217 GVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKLALA-GAPLVLAVS 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHH-HHHHHHHHH
Confidence 344444444555555666666765555678899999999999999999999999999999995 554433 333332211
Q ss_pred -CcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHH
Q 043156 107 -PPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISV 185 (578)
Q Consensus 107 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p 185 (578)
.++. ....+.+.+.+..++.|++.+...+...+++.+..|++ +++..+.+....++|..+||
T Consensus 295 ~~~l~----------~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~lg~~~G~ 357 (394)
T PRK10213 295 ALVLT----------LWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQ-------AEKAGSIQVAVIQLANTCGA 357 (394)
T ss_pred HHHHH----------HHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCccc-------HHHHHHHHHHHHHHHHHHHH
Confidence 1111 12234556667778889999988888888888888743 46777777788899999999
Q ss_pred HHHHHhccccCchhHHHHHHHHHHHH
Q 043156 186 TLIVWIQDNKGWDRGFGLSSVAVFLA 211 (578)
Q Consensus 186 ~l~~~l~~~~g~~~~f~i~~~~~~~~ 211 (578)
.++|++.+..|++..+...+.+.++.
T Consensus 358 ~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 358 AIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred HHHHHHHhccChhhHHHHHHHHHHHH
Confidence 99999999899998888876654443
No 188
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.89 E-value=2.1e-08 Score=108.61 Aligned_cols=155 Identities=9% Similarity=-0.059 Sum_probs=107.8
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhHHHH
Q 043156 51 TYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLF 130 (578)
Q Consensus 51 ~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (578)
.++.+++|.+.....+......+...++.+++|+++||+ |||+.++++.++.+++.+++.. ......... ...
T Consensus 295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~-----~~~~~~~~~-~~~ 367 (479)
T PRK10077 295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGT-----AFYTQAPGI-VAL 367 (479)
T ss_pred HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHH-----HHhcCcccH-HHH
Confidence 344567898887777777778888999999999999998 9999999988887755433200 000111111 222
Q ss_pred HHHHHHHHhccc-cccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHH------hccccCchhHHHH
Q 043156 131 VALYLIATGTAG-IKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVW------IQDNKGWDRGFGL 203 (578)
Q Consensus 131 ~~~~l~g~g~g~-~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~------l~~~~g~~~~f~i 203 (578)
....+.+.+.+. ..|...+++.|.+|+++ |++++++.+...++|.++++.+.+. +.++++|+..|++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 441 (479)
T PRK10077 368 LSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWI 441 (479)
T ss_pred HHHHHHHHHHhccccchhHHHhHhhCChhH------HHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHH
Confidence 333344444443 34677899999999876 9999999999988888888666554 4456788888988
Q ss_pred HHHHHHHHHHHHHhc
Q 043156 204 SSVAVFLATIIFAAG 218 (578)
Q Consensus 204 ~~~~~~~~~~~~~~~ 218 (578)
.++..+++.+..++.
T Consensus 442 ~~~~~~~~~~~~~~~ 456 (479)
T PRK10077 442 YGCMGVLAALFMWKF 456 (479)
T ss_pred HHHHHHHHHHHHHhc
Confidence 877666655554443
No 189
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.86 E-value=1.6e-08 Score=121.60 Aligned_cols=164 Identities=13% Similarity=0.039 Sum_probs=127.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 27 TSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLA-EAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~-~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
.++..++..++.....+....+++.|+.+.+|++.. +.+++.+...++..++.++.|+++||+ ++++++.++.++.++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~ 311 (1146)
T PRK08633 233 VLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLAL 311 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHH
Confidence 344444445555555566677889999999999999 999999999999999999999999998 999988887776664
Q ss_pred CCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHH
Q 043156 106 PPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISV 185 (578)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p 185 (578)
+.++. ....+...+++..++.|++.++..+...+++.+.+|++. |++++++++...++|.++++
T Consensus 312 ~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------rg~~~~~~~~~~~lg~~~~~ 375 (1146)
T PRK08633 312 SLFLL----------PTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE------LGKVLAANNFLQNVGMLLFL 375 (1146)
T ss_pred HHHHH----------HHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc------hhhhhHHHHHHHHHHHHHHH
Confidence 44332 223456667777888899999888888999999999887 99999999999999998888
Q ss_pred HHHHHhcc-ccCchhHHHHHHHH
Q 043156 186 TLIVWIQD-NKGWDRGFGLSSVA 207 (578)
Q Consensus 186 ~l~~~l~~-~~g~~~~f~i~~~~ 207 (578)
.+++.+.. .+++...|++.+.+
T Consensus 376 ~~~~~l~~~~~~~~~~~~~~~~~ 398 (1146)
T PRK08633 376 ALTTLFSGLGLSPAGLFYLIALV 398 (1146)
T ss_pred HHHHHHHHhccCHHHHHHHHHHH
Confidence 88776654 23455566555443
No 190
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.86 E-value=2.9e-08 Score=105.21 Aligned_cols=155 Identities=12% Similarity=0.086 Sum_probs=105.5
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccc-cc
Q 043156 47 VNLVTYFNGVLHLDLAEAANQVTNYM-GTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIE-GS 124 (578)
Q Consensus 47 ~~l~~yl~~~lg~s~~~~~~~~~~~~-~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 124 (578)
.+.+.|+.+++|++.++.+++.+... ++..++.+++|+++||+ ||||.+.++.++..+..+.. ..... ..
T Consensus 230 ~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~l~~-------~~~~~~~~ 301 (402)
T PRK11902 230 SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSNLGY-------WVLAVTPK 301 (402)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHH-------HHHHhcCC
Confidence 34455777889999999999987654 46889999999999998 99998877666544322111 00011 12
Q ss_pred hhHHHHHHH----HHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhH
Q 043156 125 DAALLFVAL----YLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRG 200 (578)
Q Consensus 125 ~~~~~~~~~----~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~ 200 (578)
+.+.+++.. +..+++.+...+....++.+.+|+++ + +++....++|..+++.++|++.+..||+..
T Consensus 302 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~ 371 (402)
T PRK11902 302 HLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ------Y----ALLSALASVGRVYVGPTSGYLVEAYGWPGF 371 (402)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------H----HHHHHHHHHHHHHHHHHHHHHHHHhChHHH
Confidence 333334333 34556666667777788888877543 3 444445567777666789999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcC
Q 043156 201 FGLSSVAVFLATIIFAAGL 219 (578)
Q Consensus 201 f~i~~~~~~~~~~~~~~~~ 219 (578)
|.+.+++.+++.++.+...
T Consensus 372 f~~~~~~~~~~~~~~~~~~ 390 (402)
T PRK11902 372 YLMTVVIALPGLALLWLMR 390 (402)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9998887777665554433
No 191
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.85 E-value=1.6e-08 Score=107.05 Aligned_cols=154 Identities=14% Similarity=0.058 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCcccccc
Q 043156 44 ALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEG 123 (578)
Q Consensus 44 ~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (578)
....++|.|+++..+ ++.+.+++.+....+......+.+++.||..+.++.+..+.++..++.++. ...
T Consensus 226 ~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l----------~~~ 294 (400)
T PRK11646 226 QVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPI----------GMV 294 (400)
T ss_pred HHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHH----------HHh
Confidence 345677888876655 677888888887776665555556665543276776777766666443332 223
Q ss_pred chhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcccc---C-chh
Q 043156 124 SDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNK---G-WDR 199 (578)
Q Consensus 124 ~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~---g-~~~ 199 (578)
++...+.+...+.+++.+...|...+++.|..|+++ |++.+++++...++|..+||.++|++.++. + ...
T Consensus 295 ~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~ 368 (400)
T PRK11646 295 SNLQQLFTLICLFYIGSIIAEPARETLSASLADARA------RGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPEL 368 (400)
T ss_pred hhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------chhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcch
Confidence 445555666677888888888998999999999887 999999999999999999999999998763 3 355
Q ss_pred HHHHHHHHHHHHHHH
Q 043156 200 GFGLSSVAVFLATII 214 (578)
Q Consensus 200 ~f~i~~~~~~~~~~~ 214 (578)
.|.+.++..+++.+.
T Consensus 369 ~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 369 PWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHHHHHHHHHH
Confidence 665555555555444
No 192
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.85 E-value=3.9e-08 Score=103.00 Aligned_cols=163 Identities=9% Similarity=0.043 Sum_probs=113.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccC
Q 043156 27 TSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLP 106 (578)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~ 106 (578)
..+...+...+....++....+.+.|+++++|.++.+.+.+.+...++..++.++.|+++||+ |||+.+..+..+..++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~ 285 (385)
T TIGR00710 207 MFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVS 285 (385)
T ss_pred hhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 344445555555666677777788899889999999999999999999999999999999998 9999988877666544
Q ss_pred CcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHH-HHHHHH
Q 043156 107 PPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCI-GGAISV 185 (578)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~l-G~~~~p 185 (578)
.++... ...........++....+.|++.+...+.......|..|+ + |+++.++++..... |+..+|
T Consensus 286 ~~~~~~-----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~------~g~~~~~~~~~~~~~g~i~~~ 353 (385)
T TIGR00710 286 AVLLEI-----TAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPH-V------AGTASALFGTLRLVLGAIVGY 353 (385)
T ss_pred HHHHHH-----HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-c------chHHHHHHHHHHHHHHHHHHH
Confidence 332200 0000112334445556677888888888888888888773 3 89999988776654 555555
Q ss_pred HHHHHhccccCchhHHHH
Q 043156 186 TLIVWIQDNKGWDRGFGL 203 (578)
Q Consensus 186 ~l~~~l~~~~g~~~~f~i 203 (578)
+.+.+.+..+|...+..
T Consensus 354 -~~~~~~~~~~~~~~~~~ 370 (385)
T TIGR00710 354 -LVSLIHGNTAWPMSLSC 370 (385)
T ss_pred -HHHhccccChHHHHHHH
Confidence 45555554445544433
No 193
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.85 E-value=1.3e-08 Score=103.96 Aligned_cols=174 Identities=17% Similarity=0.095 Sum_probs=141.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
|.+..-+++.++-+=+-..+......|...++|+++.+...+.....+...+++++.|+|.||+ |-|+++.+++++..+
T Consensus 252 ~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~ 330 (438)
T COG2270 252 KNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSI 330 (438)
T ss_pred cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHH
Confidence 3566666777777777777888889999999999999999999999999999999999999998 999999999988874
Q ss_pred CCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHH
Q 043156 106 PPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISV 185 (578)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p 185 (578)
..+.. .+......+++.-++.|+..|...+.+-++.++..|+++ -++.+|+|.........+||
T Consensus 331 ~~~~~----------~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k------~~~fFglyaltgra~S~~gp 394 (438)
T COG2270 331 AALYL----------IFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK------EGRFFGLYALTGRAASFLGP 394 (438)
T ss_pred HHHHH----------HHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc------ccceeehhhhhhhHHHHHHH
Confidence 43332 112233445566677899999999999999999999987 69999999999999999999
Q ss_pred HHHHHhccccC-chhHHHHHHHHHHHHHHHHH
Q 043156 186 TLIVWIQDNKG-WDRGFGLSSVAVFLATIIFA 216 (578)
Q Consensus 186 ~l~~~l~~~~g-~~~~f~i~~~~~~~~~~~~~ 216 (578)
.+.+.+.+..| -|..+....++..++++.++
T Consensus 395 ~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~ 426 (438)
T COG2270 395 FLVAVITQITGSSRAGVLSIIVLLLIGLLLLL 426 (438)
T ss_pred HHHHHHHHHhcchhhHHHHHHHHHHhhHhhEE
Confidence 99998877654 67777666555556655443
No 194
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.81 E-value=5.6e-09 Score=107.70 Aligned_cols=144 Identities=22% Similarity=0.182 Sum_probs=114.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccC
Q 043156 28 SLLILAAFGFENLATIALGVNLVTYFNGVLHLD-LAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLP 106 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s-~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~ 106 (578)
+|.+....+...+.++....+++.|+.+++|.+ ..+.+.+.+...+...++.++.|+++||+ |+|+...+......+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 286 (352)
T PF07690_consen 208 LWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILG 286 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHH
Confidence 344455555555677778889999999999999 89999999999999999999999999997 9887777766665533
Q ss_pred CcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHH
Q 043156 107 PPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISV 185 (578)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p 185 (578)
.+.. .......+....+...++.|++.+...+...+++.|.+|+++ |++..++.+...++|..+||
T Consensus 287 ~~~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 287 ALGL-------LLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY------RGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHH-------CCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-------HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHHHCC
Confidence 3222 111222345566667788899999999999999999999886 99999999999999999987
No 195
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.81 E-value=2.5e-08 Score=119.75 Aligned_cols=175 Identities=11% Similarity=-0.057 Sum_probs=130.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
|.++..++..++..+.++++..++|.|+++.+|.+..+.+++.+.+.++..++.++.|+++|+. ++++.+..+.++..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~ 303 (1140)
T PRK06814 225 KRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGL 303 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHH
Confidence 4566666666677777777888999999999999999999999999999999999999999987 776655554444332
Q ss_pred CCcccccC-------CCCC-c--cccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHH
Q 043156 106 PPPCNVFD-------PTAG-C--KKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFL 175 (578)
Q Consensus 106 ~~~~~~~~-------~~~~-~--~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~ 175 (578)
+.+.+.+. +... . ......+.+.+++..++.|++.++..+...+++.+.+|++. |++++|..+.
T Consensus 304 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~G~v~g~~~~ 377 (1140)
T PRK06814 304 FGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------RARVIAANNV 377 (1140)
T ss_pred HHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------ceeeeHHHHH
Confidence 21111000 0000 0 00112455667778888899999999899999999999987 9999999999
Q ss_pred HHHHHHHHHHHHHHHhcc-ccCchhHHHHHHHH
Q 043156 176 AVCIGGAISVTLIVWIQD-NKGWDRGFGLSSVA 207 (578)
Q Consensus 176 ~~~lG~~~~p~l~~~l~~-~~g~~~~f~i~~~~ 207 (578)
..++|..+++.+++.+.. ..++...|++.+++
T Consensus 378 ~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 378 LNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 999999999999998863 44666666655544
No 196
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.80 E-value=6.2e-08 Score=103.59 Aligned_cols=163 Identities=18% Similarity=0.148 Sum_probs=129.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
|....+++..++..+......+..+.|.+..+|.+ ...+.+.....++..++.++.++++||+ ||||++..+.++.++
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHH
Confidence 55666777888888888877788888888888877 5677888889999999999999999998 999999999998886
Q ss_pred CCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHH-HhhhhhHHHHHHHHHHHHHHHH
Q 043156 106 PPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIE-ARQMSSFFNLLFLAVCIGGAIS 184 (578)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~-~~~R~~~~~~~~~~~~lG~~~~ 184 (578)
+.++. ......+.+.+++..++.|++.+...+...++++|..+..+-+. +++.+..++.+.+...+|..++
T Consensus 303 ~~~~~--------~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la 374 (428)
T PF13347_consen 303 GFLLL--------FFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLA 374 (428)
T ss_pred HHHHH--------HHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHH
Confidence 65443 01111577888889999999999999999999999998553110 1224777888999999999999
Q ss_pred HHHHHHhccccCch
Q 043156 185 VTLIVWIQDNKGWD 198 (578)
Q Consensus 185 p~l~~~l~~~~g~~ 198 (578)
+.+.+.+.+..|+.
T Consensus 375 ~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 375 GAIVGLLLALVGYD 388 (428)
T ss_pred HHHHHHHHHHhCcC
Confidence 99999886655543
No 197
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.80 E-value=4.4e-09 Score=108.19 Aligned_cols=183 Identities=10% Similarity=0.081 Sum_probs=137.6
Q ss_pred HHHHHHHHHHHhhhccchhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhh
Q 043156 324 PIFCCTIVMTLCLAQLQTFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQR 403 (578)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~ 403 (578)
.+++...+-++--............+.+.. ....+.+...-.+..+++.|+.+.+.||+-|| +.
T Consensus 37 il~~vnlmny~Dr~~iagv~~~v~~~fni~-----~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~-----------~v 100 (493)
T KOG1330|consen 37 ILCLVNLMNYADRYTIAGVLKEVQTYFNIS-----DSELGLLQTVFIVVFMIASPLFGYLADRYNRK-----------RV 100 (493)
T ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHhcCCC-----chhccchhHHHHHHHHHHHHHHHHHHhhcCcc-----------eE
Confidence 344455555555455554433322222211 22345666777788899999999998877777 57
Q ss_pred HhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhH
Q 043156 404 VGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKS 483 (578)
Q Consensus 404 ~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg 483 (578)
+.+|.++-+++.+..++.. .+|.+.+.=.+.|+||....|...+++.+.+|+..|+
T Consensus 101 ~~vG~~iW~~Av~~~~fs~------------------------~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs 156 (493)
T KOG1330|consen 101 IAVGIFIWTLAVFASGFSN------------------------HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRS 156 (493)
T ss_pred EeeHHHHHHHHHHHHHHHH------------------------HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhh
Confidence 8899999999999888865 6777777889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhccccccccccc
Q 043156 484 LSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYNYRPQTS 563 (578)
Q Consensus 484 ~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~ 563 (578)
+..++++++..+|+.+|......+.+.+ .+|++.|+..++++++..++..++.++-+++..++
T Consensus 157 ~~~~ify~~ipvGsglG~vvgs~va~~~-----------------~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~ 219 (493)
T KOG1330|consen 157 RVLGIFYFAIPVGSGLGYVVGSVVASLT-----------------FWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDE 219 (493)
T ss_pred HHHHHhhhhcccccceeEEeeeeeccCc-----------------cceEEEEEeehHHHHHHHHHHHhhccCcccccccc
Confidence 9999999999999999987766655222 34778999999999999888877777655433333
No 198
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.80 E-value=4.6e-07 Score=91.44 Aligned_cols=152 Identities=18% Similarity=0.117 Sum_probs=106.2
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhHHHHHHHH
Q 043156 55 GVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALY 134 (578)
Q Consensus 55 ~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (578)
++.|++..|++.+...-...+.+..++.|.++||+ ||||.-+..++++.+.-+ .-..+++..++++|+
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl-----------~k~~~~~~~L~~GRv 129 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCL-----------TKHSSNYPVLLLGRV 129 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHH-----------HHhccccHHHHHHHH
Confidence 57999999999999999999999999999999998 999999999988884422 245678999999999
Q ss_pred HHHHhcccccccccc-ccccCCCCCChHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHhccccC--chhHHHHHHHHHHH
Q 043156 135 LIATGTAGIKAALPP-YGADQFDEKDPIEARQMSSFFNLLF-LAVCIGGAISVTLIVWIQDNKG--WDRGFGLSSVAVFL 210 (578)
Q Consensus 135 l~g~g~g~~~~~~~~-~v~~~~~~~~~~~~~~R~~~~~~~~-~~~~lG~~~~p~l~~~l~~~~g--~~~~f~i~~~~~~~ 210 (578)
+.|++..+...+--+ ++.|.-....++ +-.+.-++... ....+-++.+..++-++.+..+ -..+|..+..+..+
T Consensus 130 lgGiaTSLLfS~FEsW~V~Eh~~~g~~~--~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~ 207 (354)
T PF05631_consen 130 LGGIATSLLFSAFESWMVHEHNKRGFPQ--EWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAV 207 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCh--HHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHH
Confidence 999999887776544 344543222211 11333333333 2233344555556666666554 47889888887777
Q ss_pred HHHHHHhcCC
Q 043156 211 ATIIFAAGLP 220 (578)
Q Consensus 211 ~~~~~~~~~~ 220 (578)
+.+.+...++
T Consensus 208 ~~~~I~~~W~ 217 (354)
T PF05631_consen 208 AAVLILKTWP 217 (354)
T ss_pred HHHHHHhccc
Confidence 6665554433
No 199
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.76 E-value=7.9e-08 Score=100.51 Aligned_cols=167 Identities=13% Similarity=-0.011 Sum_probs=113.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchh---hhhhh-hhh
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRF---KAVLI-SGS 101 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr---~~~~~-~~~ 101 (578)
|..|.+....++....+|++..++|.|++ +.|++.. .+.........+.++ .++++||. .|| +.... ..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~-~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALR-PAGLEDI-AGDAVALAILAGLIG---VAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCChH-HHHHHHHHHHHHHHH---HHHhhHHh-hhhhhHHHHHHHHHH
Confidence 56788888899999999999999999996 4678864 555555555544444 57888886 554 33222 222
Q ss_pred hhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHH
Q 043156 102 VEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGG 181 (578)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~ 181 (578)
+.+++..+. ....+....++...+.+++.....+...++.+|.+|++. |+++.|+.+...++|+
T Consensus 266 ~~a~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------rgt~~G~~~~~g~~~~ 329 (368)
T TIGR00903 266 LIAAFFLAL----------AFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL------HGKAAGAIGFTSRAIS 329 (368)
T ss_pred HHHHHHHHH----------HHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh------cCcccchhhHHHHHHH
Confidence 222211111 111222233334444556666666777789999999987 9999999999999999
Q ss_pred HHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHH
Q 043156 182 AISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFA 216 (578)
Q Consensus 182 ~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~ 216 (578)
.++|.+.+.+.. +.+..|.+.++..+++.+..+
T Consensus 330 ~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 330 VALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred HHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 999999987774 667778777777666655543
No 200
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.76 E-value=5.8e-08 Score=103.79 Aligned_cols=177 Identities=17% Similarity=0.072 Sum_probs=121.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccc-------hhhhhh-
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIG-------RFKAVL- 97 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G-------rr~~~~- 97 (578)
+.+|.+.+..+++..+++.+..++|.|+.+.||++..+.|+..++..+...+..+++|+++||... +||.+-
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 568999999999999999999999999999999999999999999999999999999999999732 122221
Q ss_pred hhhhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhc-cccccccccccccCCCCCChHHHhhhhhHHHHHHHH
Q 043156 98 ISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGT-AGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLA 176 (578)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~-g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~ 176 (578)
++....++..+++ .. .........++...+ +++. |...+-...-..|..|.+ -+..+++.+..
T Consensus 338 i~~~~~ai~l~~l-------~~-~~~~~~~~a~~~l~~-~~~~~g~~~~Gf~~~~~~~apq~-------a~~l~g~~~~~ 401 (466)
T KOG2532|consen 338 IAFGGPAVFLLVL-------AF-TSDEHRLLAVILLTI-AIGLSGFNISGFYKNHQDIAPQH-------AGFVMGIINFV 401 (466)
T ss_pred HHHHHHHHHHHee-------ee-cCCCcchHHHHHHHH-HHHHcccchhhhHhhhhhccchH-------HHHHHHHHHHH
Confidence 2222222222222 00 111111111121111 1222 222222223233334443 58999999999
Q ss_pred HHHHHHHHHHHHHHhccc---cCchhHHHHHHHHHHHHHHHHHhc
Q 043156 177 VCIGGAISVTLIVWIQDN---KGWDRGFGLSSVAVFLATIIFAAG 218 (578)
Q Consensus 177 ~~lG~~~~p~l~~~l~~~---~g~~~~f~i~~~~~~~~~~~~~~~ 218 (578)
.++.+.++|.+.+.+.++ ..|+.+|++.+++.+++.+++.++
T Consensus 402 ~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 402 GALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 999999999999999843 369999999999888877665544
No 201
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.76 E-value=7.4e-08 Score=101.56 Aligned_cols=144 Identities=12% Similarity=0.026 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccc
Q 043156 43 IALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIE 122 (578)
Q Consensus 43 ~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (578)
.....+.+.|+++++|++..+.+.+.+...++..++.++.|+++||+ |||+++.+++++..++.++. ..
T Consensus 220 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~----------~~ 288 (392)
T PRK10473 220 LTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITL----------AL 288 (392)
T ss_pred HHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHH----------HH
Confidence 33445567788889999999999999999999999999999999998 99999998887776554432 11
Q ss_pred cchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHH
Q 043156 123 GSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGFG 202 (578)
Q Consensus 123 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~ 202 (578)
..+....+....+.+.|.+...+. ....+..|.++ |+. .......++..+++.+++++.+..|+.....
T Consensus 289 ~~~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~~~~~------~~g---~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~ 357 (392)
T PRK10473 289 SPSHAVSLFGITLICAGFSVGFGV--AMSQALGPFSL------RAG---VASSTLGIAQVCGSSLWIWLAAVLGISAWNM 357 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHH--HHHHHhccCcc------ccc---HHHHHHHHHHHHHHHHHHHHHHHhccchhHH
Confidence 122222233333333333332222 22233444433 432 2223344555566666666666666655444
Q ss_pred HHHHHH
Q 043156 203 LSSVAV 208 (578)
Q Consensus 203 i~~~~~ 208 (578)
+.+...
T Consensus 358 ~~~~~~ 363 (392)
T PRK10473 358 LIGILI 363 (392)
T ss_pred HHHHHH
Confidence 444433
No 202
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.75 E-value=1.6e-08 Score=109.40 Aligned_cols=176 Identities=20% Similarity=0.161 Sum_probs=147.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhh--hhhhhhhhh
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFK--AVLISGSVE 103 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~--~~~~~~~~~ 103 (578)
+..+.+.+...+..++++.-..+++.|.. ..|.+..++..++++..+...++.++.|+++|+. ..++ +..+++++.
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 67788888889999999988899999987 8999999999999999999999999999999997 6333 444444444
Q ss_pred ccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHH
Q 043156 104 FLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAI 183 (578)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~ 183 (578)
.+..+.. ....++..++..-++.|+..|......+..+.|..+.++ -..++|+......++..+
T Consensus 376 gl~~~~~----------p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------l~~a~Gl~l~~~gi~~l~ 439 (509)
T KOG2504|consen 376 GLARLFL----------PFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------LSNAYGLLLLFQGIGALV 439 (509)
T ss_pred HHHHHHH----------HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------cchHHHHHHHHhHHHHHc
Confidence 4333222 445677888888889999999988888889999999886 899999999999999999
Q ss_pred HHHHHHHhccccC-chhHHHHHHHHHHHHHHHHHhcC
Q 043156 184 SVTLIVWIQDNKG-WDRGFGLSSVAVFLATIIFAAGL 219 (578)
Q Consensus 184 ~p~l~~~l~~~~g-~~~~f~i~~~~~~~~~~~~~~~~ 219 (578)
||.++|++.+..+ |...|+.+++..+++.+.++...
T Consensus 440 gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 440 GPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred CcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999998877 99999999998888776665544
No 203
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.75 E-value=1.7e-07 Score=82.44 Aligned_cols=135 Identities=19% Similarity=0.205 Sum_probs=103.4
Q ss_pred cCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCcc
Q 043156 366 PILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLP 445 (578)
Q Consensus 366 ~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (578)
.....+..++..++.+++.||+++| +.+..+..+..++.+......
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~-----------~~~~~~~~~~~~~~~~~~~~~----------------------- 49 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRK-----------PVLLVGLFIFVLSTAMFALSS----------------------- 49 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchh-----------HHHHHHHHHHHHHHHHHHHhc-----------------------
Confidence 3445677888899999999888777 355666666666665554422
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCC
Q 043156 446 ISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNN 525 (578)
Q Consensus 446 ~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (578)
+.+.+....++.+++.+...+..+.++.+.+|++.|+++.++.+....++..+++.+.+.+.+
T Consensus 50 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---------------- 112 (141)
T TIGR00880 50 -NITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQ---------------- 112 (141)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhc----------------
Confidence 455566677888999998899999999999999999999999999999999999998887652
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHhhhc
Q 043156 526 INRNHLNLFFWLLSALSFINFSVYLFMS 553 (578)
Q Consensus 526 ~~~~~~~~~f~~~~~~~~i~~i~~~~~~ 553 (578)
..+++..|+..+++.+++.+..+++.
T Consensus 113 --~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (141)
T TIGR00880 113 --FLGWRAPFLFLAILALAAFILLAFLL 138 (141)
T ss_pred --ccchHHHHHHHHHHHHHHHHHHhhcC
Confidence 12345678887877777776666554
No 204
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.74 E-value=1.5e-07 Score=99.53 Aligned_cols=158 Identities=9% Similarity=-0.106 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCc
Q 043156 39 NLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGC 118 (578)
Q Consensus 39 ~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (578)
..........++.|+++.+|.+..+.|.+.+...++..++.++.|++.||. ++|+++..+... .+..++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~~-~~~~~~~-------- 287 (393)
T PRK11195 218 WGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGILM-GLVVLLM-------- 287 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHHH-HHHHHHH--------
Confidence 333444445567788889999999999999999999999999999999997 999888777533 2111111
Q ss_pred cccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCch
Q 043156 119 KKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWD 198 (578)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~ 198 (578)
....+.+...+..++.|++.+...+...+.+.+..|++. .++++.++.+...++|..++..+.+.+ +.+|-+
T Consensus 288 --~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~-----~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~ 359 (393)
T PRK11195 288 --ALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV-----GAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVP 359 (393)
T ss_pred --HHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc-----cchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCC
Confidence 223445555566777889988888878888877644432 269999999999999999999888866 456767
Q ss_pred hHHHHHHHHHHHHHHH
Q 043156 199 RGFGLSSVAVFLATII 214 (578)
Q Consensus 199 ~~f~i~~~~~~~~~~~ 214 (578)
..+.+.++..+.++..
T Consensus 360 ~~~~~~~~~~~~~~~~ 375 (393)
T PRK11195 360 VVAVIVGFGLLVALAM 375 (393)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6666655554444433
No 205
>TIGR00898 2A0119 cation transport protein.
Probab=98.72 E-value=3.2e-08 Score=108.06 Aligned_cols=143 Identities=15% Similarity=-0.021 Sum_probs=99.0
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhHHHHHHHH
Q 043156 55 GVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALY 134 (578)
Q Consensus 55 ~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (578)
+.++.+.. .......+....+.+++++++||+ |||+++.++.++..++.++.. ..........++..+
T Consensus 351 ~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~~~ 418 (505)
T TIGR00898 351 GNLGGNIY---LDLFISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLL--------FVPVDLYFLRTALAV 418 (505)
T ss_pred cccCCChH---HHHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHH--------HcCCCchHHHHHHHH
Confidence 44555533 333344566778888999999998 999999988877665433320 011112233344445
Q ss_pred HHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHH
Q 043156 135 LIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGLSSVAVFLATII 214 (578)
Q Consensus 135 l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~ 214 (578)
+.+++.+...+..+.+.+|.+|++. |++++++.+....+|++++|.+.+ +.+ .++..++++.++..+++.+.
T Consensus 419 ~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~~~~~~~~~~~~~~~~~~~~ 490 (505)
T TIGR00898 419 LGKFGITSAFQMVYLYTAELYPTVV------RNLGVGVCSTMARVGSIISPFLVY-LGE-KWLFLPLVLFGGLALLAGIL 490 (505)
T ss_pred HHHHHHHHHHHHHHHHhcccccHHH------HhhhHhHHHHHHHHHHHHHhHHHH-HHH-HHHhhHHHHHHHHHHHHHHH
Confidence 5566666667778899999999886 999999999999999999999998 443 46677777777666665554
Q ss_pred HHh
Q 043156 215 FAA 217 (578)
Q Consensus 215 ~~~ 217 (578)
.++
T Consensus 491 ~~~ 493 (505)
T TIGR00898 491 TLF 493 (505)
T ss_pred HHc
Confidence 444
No 206
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.72 E-value=4e-08 Score=102.12 Aligned_cols=138 Identities=17% Similarity=0.106 Sum_probs=108.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 27 TSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYM-GTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~-~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
..+.+.+..++....++...++.+.|+++ +|++.++.+.+.+... ++..++.+++|+++||+ ||||.+.++.++..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 287 (356)
T TIGR00901 210 QALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQAL 287 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHH
Confidence 46666666777788888888999999986 9999999998888766 57889999999999998 999998888877664
Q ss_pred CCcccccCCCCCcccccc-------chhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHH
Q 043156 106 PPPCNVFDPTAGCKKIEG-------SDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVC 178 (578)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~ 178 (578)
+..+.. ...... .+...+....++.+++.+...+...+++.|.+|+++ |++.+++++...|
T Consensus 288 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~ 355 (356)
T TIGR00901 288 TNAGFV------WLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF------GATQMALLSSLSA 355 (356)
T ss_pred HHHHHH------HHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc------cHHHHHHHHHHHh
Confidence 433210 000001 234556677778899999999999999999999998 9999999887765
No 207
>PRK09848 glucuronide transporter; Provisional
Probab=98.70 E-value=3.4e-08 Score=106.24 Aligned_cols=163 Identities=13% Similarity=0.086 Sum_probs=118.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
|..+...+..++....++......+.|+++.+|.+....++......++..++.++.++++||+ |+|+++.++.++..+
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i 306 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTC 306 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 3455556666666666666666677788888898776666555555667888999999999998 999999999887775
Q ss_pred CCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHH-HhhhhhHHHHHHHHHHHHHHHH
Q 043156 106 PPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIE-ARQMSSFFNLLFLAVCIGGAIS 184 (578)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~-~~~R~~~~~~~~~~~~lG~~~~ 184 (578)
+.++.. .....+.+.+++..++.++|.+...+...++.+|..|.++-+- +++++..++.+++...+|..+|
T Consensus 307 ~~~~~~--------~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig 378 (448)
T PRK09848 307 GYLLFF--------WVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIG 378 (448)
T ss_pred HHHHHH--------HcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHH
Confidence 543320 1112345556677788899999999999999999887653100 0125888889999999999999
Q ss_pred HHHHHHhccccCc
Q 043156 185 VTLIVWIQDNKGW 197 (578)
Q Consensus 185 p~l~~~l~~~~g~ 197 (578)
+.+.+.+.+..||
T Consensus 379 ~~i~g~~l~~~G~ 391 (448)
T PRK09848 379 GSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHcCC
Confidence 9999888655555
No 208
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.68 E-value=1.1e-07 Score=94.85 Aligned_cols=171 Identities=15% Similarity=0.051 Sum_probs=114.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCC----H------------HHHHHH-HHHHHHHHHHHHhHHHHH
Q 043156 25 IKTSLLILAAFGFENLATIALGVNLVTYFNGVL--HLD----L------------AEAANQ-VTNYMGTSYILSIVVALL 85 (578)
Q Consensus 25 ~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~l--g~s----~------------~~~~~~-~~~~~~~~~~~~~~~G~l 85 (578)
+|..+.+....|.+.++||++.-......+... +.+ + .+.... ..+.++..+-+.++.|++
T Consensus 325 rkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~i 404 (528)
T KOG0253|consen 325 RKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVI 404 (528)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHH
Confidence 455677778888999999998765544444321 000 1 111112 223466778889999999
Q ss_pred hhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhh
Q 043156 86 ADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQ 165 (578)
Q Consensus 86 aD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~ 165 (578)
.||+ ||||++..+++++.+.++++ ..|...+.. ..+++.+|+.... .+.+.+.|..|.+|+..
T Consensus 405 verl-GRKkTMal~l~~f~iflfll-----~~c~~rn~~-tvllf~arafisg----~fqvaYvYtPEVyPTav------ 467 (528)
T KOG0253|consen 405 VERL-GRKKTMALSLILFGIFLFLL-----TTCKTRNAY-TVLLFTARAFISG----AFQVAYVYTPEVYPTAV------ 467 (528)
T ss_pred HHHh-cchhHHHHHHHHHHHHHHHH-----HHhcCcchh-HHHHHHHHHHHhc----hheEEEEecCcccchhh------
Confidence 9997 99999999999988665543 112222222 2356677777653 34567899999999997
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHH
Q 043156 166 MSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGLSSVAVFLATII 214 (578)
Q Consensus 166 R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~ 214 (578)
|+.+.|....+..+|+++.|.++.... -+-..+..+.+.+.+++.+.
T Consensus 468 RatgvGtcSsmaRIggI~~p~iA~~~e--~s~sl~i~vy~~~~ilagIa 514 (528)
T KOG0253|consen 468 RATGVGTCSSMARIGGIFSPVIAMRAE--LSTSLPIFVYGALFILAGIA 514 (528)
T ss_pred hhcchhhhhhHHhhhhhhhhHHHHHhc--cceeehHHHHHHHHHHHHHH
Confidence 999999999999999999999983222 23333444555555544443
No 209
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.64 E-value=4.3e-07 Score=91.04 Aligned_cols=172 Identities=15% Similarity=0.087 Sum_probs=129.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
+..|.+.+-.-+.+..||.++.++|.++. +.|+|..++|++.+..++......+..-.+++|.-.+|+........+.+
T Consensus 208 ~~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~ 286 (395)
T COG2807 208 PLAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLV 286 (395)
T ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 44677777777899999999999999986 66999999999999999999999999999999875667777776666665
Q ss_pred CCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHH
Q 043156 106 PPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISV 185 (578)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p 185 (578)
|..-+ + ..-...+. +. .+++|+|.|...|....++.+..+..+ +-++..++.+-...+=+.+||
T Consensus 287 G~~G~-------~-~~P~~~~~-lw--~~llG~G~G~~F~laL~li~~rs~~a~-----~Aa~LSgmaQg~GYllAa~GP 350 (395)
T COG2807 287 GLVGL-------L-LAPGQLPI-LW--ALLLGLGQGGAFPLALTLILLRSSDAA-----IAAALSGMAQGVGYLLAAFGP 350 (395)
T ss_pred HHHHH-------H-HhhhhHHH-HH--HHHHhCccchHHHHHHHHHHhhcCChH-----HHHHHHHHhhhhhHHHHhhhh
Confidence 53332 1 11112222 22 478899999999999999999887654 256666676666666688999
Q ss_pred HHHHHhccccC-chhHHHHHHHHHHHHHHH
Q 043156 186 TLIVWIQDNKG-WDRGFGLSSVAVFLATII 214 (578)
Q Consensus 186 ~l~~~l~~~~g-~~~~f~i~~~~~~~~~~~ 214 (578)
.+.|++.|..| |+.++...+...+...++
T Consensus 351 ~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~ 380 (395)
T COG2807 351 WLFGFLHDATGSWSAPLVLLALATLLMLIF 380 (395)
T ss_pred hhHhHHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 99999988764 998887766655444433
No 210
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.61 E-value=1.3e-07 Score=102.54 Aligned_cols=165 Identities=17% Similarity=0.060 Sum_probs=114.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
|..+.+++..++.....+....+.+.|++..++ +....+.+.+...++..++.++.++++||+ |||+++.++.++..+
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 666667777777777666665665544443444 566667777777788899999999999998 999999888766553
Q ss_pred CCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHH-HhhhhhHHHHHHHHHHHHHHHH
Q 043156 106 PPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIE-ARQMSSFFNLLFLAVCIGGAIS 184 (578)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~-~~~R~~~~~~~~~~~~lG~~~~ 184 (578)
+.+...+ .......+...+++.-++.+++.+...+...++++|..+..+-+- +++.+..++...+...+|..++
T Consensus 309 ~~~~~~~-----~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~ 383 (473)
T PRK10429 309 SCGVLLL-----MGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFA 383 (473)
T ss_pred HHHHHHH-----HhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHH
Confidence 3322100 000112345556666677888999888888999999977432100 0113447788889999999999
Q ss_pred HHHHHHhccccCc
Q 043156 185 VTLIVWIQDNKGW 197 (578)
Q Consensus 185 p~l~~~l~~~~g~ 197 (578)
+.+.|++.+..||
T Consensus 384 ~~i~g~~l~~~Gy 396 (473)
T PRK10429 384 AFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHcCC
Confidence 9999998776666
No 211
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.59 E-value=2.3e-07 Score=98.48 Aligned_cols=190 Identities=17% Similarity=0.017 Sum_probs=128.4
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhh
Q 043156 23 GGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSV 102 (578)
Q Consensus 23 ~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~ 102 (578)
++++..++.+...+...++-.-...+-...+-++-|++..++.+++........+..+++.++.||+ |||+.++++..+
T Consensus 266 ~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~ 344 (485)
T KOG0569|consen 266 TLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSL 344 (485)
T ss_pred chhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHH
Confidence 3455566666666666665444444445566678899999999999999999999999999999998 999999999888
Q ss_pred hccCCcccccCCCCCccccccch-h-HHHHHHHHHHHHhcc-ccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHH
Q 043156 103 EFLPPPCNVFDPTAGCKKIEGSD-A-ALLFVALYLIATGTA-GIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCI 179 (578)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~l~g~g~g-~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~l 179 (578)
+.+..+++.. .......... . ...+++.++..+..+ +..|...-+.+|.+|++. |..++++.+....+
T Consensus 345 ~~~~~~~~~~---~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~------R~aa~s~~~~~~w~ 415 (485)
T KOG0569|consen 345 MAVALLLMSI---ALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA------RSAAQSVATAVNWL 415 (485)
T ss_pred HHHHHHHHHH---HHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc------hHHHHHHHHHHHHH
Confidence 8755443310 0000000101 1 122344444444444 346778899999999997 99999987777777
Q ss_pred HHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCCCce
Q 043156 180 GGAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLPLYR 223 (578)
Q Consensus 180 G~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~ 223 (578)
...+-...-..+.+..|- +.|.+..+...+..+..+...|+.+
T Consensus 416 ~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 416 SNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETK 458 (485)
T ss_pred HHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccC
Confidence 776666666777776664 5666666666666655555555433
No 212
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.59 E-value=7.1e-07 Score=93.38 Aligned_cols=149 Identities=11% Similarity=0.036 Sum_probs=99.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccC
Q 043156 27 TSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLP 106 (578)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~ 106 (578)
..+..++..++.....+....+.+.++.+++|++..+.+.+.+...++..++.+++|+++||+ ||||++.++..+..+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~ 273 (377)
T PRK11102 195 RVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIM 273 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHH
Confidence 344445555555556666666777788888999999999999999999999999999999998 9999998887654422
Q ss_pred CcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHH-HHHHHHHHH
Q 043156 107 PPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLA-VCIGGAISV 185 (578)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~-~~lG~~~~p 185 (578)
.+... .......+.+...++..+.+.+.+...+.....+.|..| ++ |++..+.++.. ..+|..+++
T Consensus 274 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~~~~~g~~~g~ 340 (377)
T PRK11102 274 GIWLV------VSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HM------AGTASSLAGTLRFGIGAIVGA 340 (377)
T ss_pred HHHHH------HHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-cc------chHHHHHHHHHHHHHHHHHHH
Confidence 11110 000011233334444444455555555566667778777 44 78888886553 456777776
Q ss_pred HHHH
Q 043156 186 TLIV 189 (578)
Q Consensus 186 ~l~~ 189 (578)
.+++
T Consensus 341 ~~~~ 344 (377)
T PRK11102 341 LLSL 344 (377)
T ss_pred HHHh
Confidence 6544
No 213
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.59 E-value=1.7e-07 Score=97.52 Aligned_cols=139 Identities=11% Similarity=0.013 Sum_probs=102.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccC
Q 043156 27 TSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLP 106 (578)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~ 106 (578)
..+.+.+..+.....++.+..+.+.|+++.+|++..+++.+.+...+...++.+++|+++||+ |||+.+..+......+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~ 304 (366)
T TIGR00886 226 HTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMG 304 (366)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHH
Confidence 345555556666666777788899999999999999999999999999999999999999998 9998887776555533
Q ss_pred CcccccCCCCCccccccc--hhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHH
Q 043156 107 PPCNVFDPTAGCKKIEGS--DAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGG 181 (578)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~ 181 (578)
..+.. ..... +.....+...+.+++.|...+...++++|.+|. + |++.+|+.+...++|+
T Consensus 305 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~------~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 305 AFLVV--------LGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRR-A------TGAVSGLVGAIGNLGG 366 (366)
T ss_pred HHHHH--------hcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhchh-h------cccHHHHHHHhccCCC
Confidence 32220 01111 444455555566666677777778888888874 3 8999999888877763
No 214
>PRK11043 putative transporter; Provisional
Probab=98.58 E-value=1e-06 Score=93.27 Aligned_cols=152 Identities=7% Similarity=-0.079 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccC
Q 043156 34 AFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFD 113 (578)
Q Consensus 34 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~ 113 (578)
...+....++....+.|.|++ +.|++..+.+.......++..++.++++++.||+ |+|+++....+...+..+...+
T Consensus 211 ~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~- 287 (401)
T PRK11043 211 IFAACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWL- 287 (401)
T ss_pred HHHHHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHH-
Confidence 333444555666677777775 5899999999988888888899999999999998 9999776554444422211100
Q ss_pred CCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcc
Q 043156 114 PTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQD 193 (578)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~ 193 (578)
.......+....++...+.+++.+...|...+...|..|+ + |+++.++++.....++..++.+.+.+.+
T Consensus 288 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 288 ----ASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ-A------TGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred ----HHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc-c------ChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 0001123344455556677888888888877777777764 4 8999999998888888888888888876
Q ss_pred ccCchh
Q 043156 194 NKGWDR 199 (578)
Q Consensus 194 ~~g~~~ 199 (578)
......
T Consensus 357 ~~~~~~ 362 (401)
T PRK11043 357 TPLLTT 362 (401)
T ss_pred CChhHH
Confidence 443333
No 215
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.57 E-value=7.6e-07 Score=93.88 Aligned_cols=173 Identities=13% Similarity=0.004 Sum_probs=126.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCC
Q 043156 28 SLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPP 107 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~ 107 (578)
+...++..+....+.-....+...|+++.-|.+....+.+.+...++-.+...+.+++-.|+ |-|++++++.+.+++=.
T Consensus 209 ~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR~ 287 (400)
T PF03825_consen 209 FLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVRW 287 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 33344455566666666678888998755557888888888888888999999999999998 99999999998877332
Q ss_pred cccccCCCCCcccccc-chhHH----HHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHH-HHHHH
Q 043156 108 PCNVFDPTAGCKKIEG-SDAAL----LFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLA-VCIGG 181 (578)
Q Consensus 108 ~~~~~~~~~~~~~~~~-~~~~~----~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~-~~lG~ 181 (578)
.+. +.. ++.+. ...+..+.|+..|....+...++.+..|++. |+++-+++... ..+|.
T Consensus 288 ~l~----------a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~------~at~Q~l~~~~~~Glg~ 351 (400)
T PF03825_consen 288 LLY----------AYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL------RATAQGLYSALSFGLGG 351 (400)
T ss_pred HHH----------HHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc------hHHHHHHHHHHHhhHHH
Confidence 221 111 22222 2333456899999999999999999999987 99999998775 57999
Q ss_pred HHHHHHHHHhccccCch------hHHHHHHHHHHHHHHHHHh
Q 043156 182 AISVTLIVWIQDNKGWD------RGFGLSSVAVFLATIIFAA 217 (578)
Q Consensus 182 ~~~p~l~~~l~~~~g~~------~~f~i~~~~~~~~~~~~~~ 217 (578)
.+|..++|++.+++|-+ ..|.+.+...++..+.++.
T Consensus 352 ~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~ 393 (400)
T PF03825_consen 352 AIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVI 393 (400)
T ss_pred HHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999877644 4455555554444444443
No 216
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.52 E-value=3.5e-05 Score=81.31 Aligned_cols=103 Identities=10% Similarity=0.037 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhcccccccc
Q 043156 68 VTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAAL 147 (578)
Q Consensus 68 ~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~ 147 (578)
.++......+..++++.+.|++ |.|..+.++...+..--+- + ...|-.-++..-.+.|+|.+..+...
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~g--------f---l~~N~y~~yfssallG~Gaallw~Gq 123 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLG--------F---LFPNSYYLYFSSALLGFGAALLWTGQ 123 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHH--------H---HhcchHHHHHHHHHhhhhHHheeccc
Confidence 6667777888999999999997 9999999999887711111 0 12445667888899999999999999
Q ss_pred ccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 043156 148 PPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLI 188 (578)
Q Consensus 148 ~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~ 188 (578)
-.+++|..+++. +++-.++.-...+.+.++|..+.
T Consensus 124 G~ylt~~st~~t------ie~Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 124 GGYLTSNSTRET------IERNISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred ceehhhcCChhh------HHHHHHHHHHHHHHHHHhhhHhh
Confidence 999999888776 77777776666666666664443
No 217
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.51 E-value=1.3e-06 Score=92.83 Aligned_cols=140 Identities=10% Similarity=0.001 Sum_probs=108.4
Q ss_pred cccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCC
Q 043156 364 SLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQP 443 (578)
Q Consensus 364 ~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (578)
...+...+...+..++.+.+.||++|| +.+..+.++.+++.+......
T Consensus 55 ~~~s~~~~~~~~~~~~~G~l~dr~Grr-----------~~l~~~~~~~~~~~~~~~~a~--------------------- 102 (413)
T PRK15403 55 ASVSLYLAGGMALQWLLGPLSDRIGRR-----------PVLITGALIFTLACAATLFTT--------------------- 102 (413)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHcCch-----------HHHHHHHHHHHHHHHHHHHcC---------------------
Confidence 344555677788889999999999888 466777777777776665532
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCC
Q 043156 444 LPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAG 523 (578)
Q Consensus 444 ~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~ 523 (578)
+.++++..-++.|++++...+....++.+..|++.+++.+++.+....++..+|+.+.+.+.+
T Consensus 103 ---~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~-------------- 165 (413)
T PRK15403 103 ---SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMH-------------- 165 (413)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------
Confidence 666777778889999887777777788889999999999999999999999999988877651
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHhhhcccc
Q 043156 524 NNINRNHLNLFFWLLSALSFINFSVYLFMSSRY 556 (578)
Q Consensus 524 ~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~ 556 (578)
..+|++.|+..+++.++..+..++..++.
T Consensus 166 ----~~gw~~~f~~~~~~~~i~~~~~~~~lp~~ 194 (413)
T PRK15403 166 ----FVHWKVLFAIIAVMGLIAFVGLLLAMPET 194 (413)
T ss_pred ----hcCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 12467889998888888776655545543
No 218
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.50 E-value=1.1e-06 Score=92.73 Aligned_cols=138 Identities=10% Similarity=-0.060 Sum_probs=98.6
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccch
Q 043156 46 GVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSD 125 (578)
Q Consensus 46 ~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (578)
....+.|+++.+|.+..+.+++......+..++.++.+++.||+ ||+....+...+.....+.. .......+
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 298 (394)
T PRK11652 227 EACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQSVICCLLAGLLMWI-------PGWFGVMN 298 (394)
T ss_pred HHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-------HHHhcccc
Confidence 44566788888999999999998888888889999999999997 74443332222111110000 00011234
Q ss_pred hHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCch
Q 043156 126 AALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWD 198 (578)
Q Consensus 126 ~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~ 198 (578)
.+.+..+..+.++|.+...|...+...|.+|+ + +++..++.+...++|..+++.+++++.+...+.
T Consensus 299 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~------~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~ 364 (394)
T PRK11652 299 VWTLLVPAALFFFGAGMLFPLATSGAMEPFPY-L------AGTAGALLGGLQNIGSGLAALLSAMLPQTGQFS 364 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-c------chHHHHHHHHHHHHHHHHHHHHHHHccCCchHH
Confidence 45566777888999999899999988898874 3 799999999999999999999999887654333
No 219
>PRK09669 putative symporter YagG; Provisional
Probab=98.49 E-value=3.4e-07 Score=98.42 Aligned_cols=160 Identities=16% Similarity=0.063 Sum_probs=105.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccC
Q 043156 28 SLLILAAFGFENLATIALGVNLVTYFNG-VLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLP 106 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~l~~yl~~-~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~ 106 (578)
.+.++...++.......... ...|+.+ .++ +....+.+.....+...++.++.++++||+ |||+.+.++.++..+.
T Consensus 231 ~~~l~~~~~~~~~~~~~~~~-~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~ 307 (444)
T PRK09669 231 WRIMFIFNVVLLTAVVTRGG-ATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVIL 307 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhh-hhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHH
Confidence 44444444444444433233 3344433 333 333445556666777888899999999998 9999998877655532
Q ss_pred CcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHH-hhhhhHHHHHHHHHHHHHHHHH
Q 043156 107 PPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEA-RQMSSFFNLLFLAVCIGGAISV 185 (578)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~-~~R~~~~~~~~~~~~lG~~~~p 185 (578)
.+.. .. ....+...+++..++.+++.+...+...++++|..+.++-+.. ++.+..++.+.+..++|..+|+
T Consensus 308 ~~~~-------~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~ 379 (444)
T PRK09669 308 SALI-------FF-IPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGG 379 (444)
T ss_pred HHHH-------HH-hCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHH
Confidence 2111 00 1134555667777889999999999999999999874431100 1235567888999999999999
Q ss_pred HHHHHhccccCch
Q 043156 186 TLIVWIQDNKGWD 198 (578)
Q Consensus 186 ~l~~~l~~~~g~~ 198 (578)
.++|++.+..||+
T Consensus 380 ~i~g~ll~~~Gy~ 392 (444)
T PRK09669 380 AVVGWILAWVDYV 392 (444)
T ss_pred HHHHHHHHHcCCC
Confidence 9999987766663
No 220
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.48 E-value=2.7e-07 Score=93.28 Aligned_cols=149 Identities=15% Similarity=0.136 Sum_probs=129.8
Q ss_pred eeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCC
Q 043156 359 HIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAI 438 (578)
Q Consensus 359 ~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (578)
+...+++.+...+..++..|+.+.+.||++.| ..+.+|++++..+.++.++.+
T Consensus 105 ~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~-----------ipm~~Gl~vmf~sTilFafg~---------------- 157 (464)
T KOG3764|consen 105 NTQIGLLFASKALVQLLVNPFFGNLIDRIGYK-----------IPMVAGLFVMFLSTILFAFGN---------------- 157 (464)
T ss_pred ccchhHHHHHHHHHHHHhcccchhhHHHhccc-----------cHHHHHHHHHHHHHHHHHHcc----------------
Confidence 44567888888999999999999999999988 478999999999999999966
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchh-hHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCC
Q 043156 439 PVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGI-KSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQS 517 (578)
Q Consensus 439 ~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~-rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~ 517 (578)
+.+.++++=.++|+|.........+++.+.+|++. ||+++|+......+|..+||.+.|++.+.
T Consensus 158 --------sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~------- 222 (464)
T KOG3764|consen 158 --------SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEF------- 222 (464)
T ss_pred --------hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhh-------
Confidence 66678888999999999999999999999999987 59999999999999999999999988732
Q ss_pred CCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccccc
Q 043156 518 GGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYNYRP 560 (578)
Q Consensus 518 ~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~ 560 (578)
.+++.-|.++++++++-...-+++.+.++.++
T Consensus 223 -----------~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 223 -----------AGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred -----------cCCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 23335599999999999998888888776555
No 221
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.47 E-value=1.1e-06 Score=93.31 Aligned_cols=163 Identities=16% Similarity=0.045 Sum_probs=112.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccC
Q 043156 28 SLLILAAFGFENLATIALGVNLVTYFNGVL-HLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLP 106 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~l~~yl~~~l-g~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~ 106 (578)
.+..++..++......+..++++.|+.+.. +.+....+...+.+..+..++.+++|+++||+ ++||++.++.++..+.
T Consensus 234 ~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~~ 312 (410)
T TIGR00885 234 YREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMAL 312 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHH
Confidence 333444555555555567788899986532 55555666677777788999999999999998 9999988887776644
Q ss_pred CcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 043156 107 PPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVT 186 (578)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~ 186 (578)
.++. ....+.. ......+.++..+..+|...++..+..+++. ..+.+....+ .+|+++.|.
T Consensus 313 ~ll~----------~~~~~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~-------~~~s~~l~~~-~~Gga~~p~ 373 (410)
T TIGR00885 313 CLGS----------IFAGGHV-GLYCLTLCSAFMSLMFPTIYGIALKGLGQDT-------KYGAAGLVMA-IIGGGIVPP 373 (410)
T ss_pred HHHH----------HHcCChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------hhhHHHHHHH-HhccchHHH
Confidence 3332 1112222 2455666778888888999999999998653 2333333333 399999999
Q ss_pred HHHHhcccc------CchhHHHHHHHHHHH
Q 043156 187 LIVWIQDNK------GWDRGFGLSSVAVFL 210 (578)
Q Consensus 187 l~~~l~~~~------g~~~~f~i~~~~~~~ 210 (578)
+.|++.|.. +.+..|++..++.+.
T Consensus 374 l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~ 403 (410)
T TIGR00885 374 LQGFIIDMKEIAAAPAVNTSFILPLLCFAV 403 (410)
T ss_pred HHHHHHHHhcccccCccchHHHHHHHHHHH
Confidence 999999853 478888886665443
No 222
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.42 E-value=7e-07 Score=93.02 Aligned_cols=178 Identities=13% Similarity=0.096 Sum_probs=135.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhh
Q 043156 25 IKTSLLILAAFGFENLATIALGVNLVTYFNGVLH---LDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGS 101 (578)
Q Consensus 25 ~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg---~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 101 (578)
.|..|.+.+........|+..-...+.|.+..++ .+....|.+.+.-.+.-.+...+..++-+|+ |.|+.++++.+
T Consensus 219 ~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag~ 297 (412)
T PF01306_consen 219 MRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAGV 297 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHHH
Confidence 3566666655555556666665667788775443 3445678888888888999999999999998 99999999988
Q ss_pred hhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHH-HHHHHHHH
Q 043156 102 VEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNL-LFLAVCIG 180 (578)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~-~~~~~~lG 180 (578)
+.++=.... +..++++.+.+...+-++-.+....+...++++.+|++. .++.+.+ ++.+..+|
T Consensus 298 i~~iRi~~~----------~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl------sAt~y~v~~~~~~~~~ 361 (412)
T PF01306_consen 298 IMAIRIIGS----------GFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL------SATLYLVGFQFAKQIG 361 (412)
T ss_dssp HHHHHHHHH----------HT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG------HHHHHHHHHTTTHHHH
T ss_pred HHHHHHHHH----------hhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH------HHHHHHHHHHHHHHHH
Confidence 877332221 446788889999999999999999999999999999875 6778877 46788999
Q ss_pred HHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcC
Q 043156 181 GAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGL 219 (578)
Q Consensus 181 ~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~ 219 (578)
..+.+.++|++.|+.|++..|++.+.+.+...++..+..
T Consensus 362 ~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l 400 (412)
T PF01306_consen 362 IIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTL 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeee
Confidence 999999999999999999999888877666555544443
No 223
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.42 E-value=5.9e-06 Score=88.60 Aligned_cols=213 Identities=12% Similarity=0.073 Sum_probs=132.5
Q ss_pred HHHHhHHHHHHHHHHHHHhhhccchhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCC
Q 043156 317 KIILGMIPIFCCTIVMTLCLAQLQTFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPT 396 (578)
Q Consensus 317 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~ 396 (578)
+++++....++.....|.+...+.+.+.+. .+.+. ...+.+....++..++..|+.+.+.||...|.+|++
T Consensus 4 ~~li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~-------~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRr- 74 (477)
T TIGR01301 4 RKLLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPH-------AWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRR- 74 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCH-------HHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChH-
Confidence 444555555555555566555554444332 22222 123456677789999999999999997544544332
Q ss_pred CCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeecc
Q 043156 397 GITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSE 476 (578)
Q Consensus 397 ~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~ 476 (578)
..+..|.+...++++++++.........++. .+.......+..+..+.+..++....+++..+++.|.
T Consensus 75 -----p~il~g~~~~~~~l~ll~~~~~~~~~~~~~~-------~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl 142 (477)
T TIGR01301 75 -----PFIAAGAALVAFAVILIGFAADIGHLFGDNL-------DKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADL 142 (477)
T ss_pred -----HHHHHHHHHHHHHHHHHHhCchhhhhccccc-------cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 2344467777777776666432110000000 0001122224445555566778888888899999999
Q ss_pred CCchhh--HHHHHHHHHHHHHHHHHHHHHHHhhh-----ccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 043156 477 APKGIK--SLSTCFLWCSMALGYFFSTILVNIVN-----SATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVY 549 (578)
Q Consensus 477 ~P~~~r--g~~~g~~~~~~~ig~~lg~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~ 549 (578)
+|++.| +.+.+..+...++|+.+|+.+.++.. ..+.. ...+.. ..+++..|++.+++.+++.++.
T Consensus 143 ~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~--~~~~~~------~~~~~~~F~i~a~~l~i~~l~t 214 (477)
T TIGR01301 143 TGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKT--EACGVS------CANLKSCFLIDIILLAILTYIA 214 (477)
T ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccc--cccccc------cchHHHHHHHHHHHHHHHHHHH
Confidence 999876 67999999999999999998877642 11100 001111 1478889999999999999999
Q ss_pred hhhcccccc
Q 043156 550 LFMSSRYNY 558 (578)
Q Consensus 550 ~~~~~~~~~ 558 (578)
++..++...
T Consensus 215 ~~~v~E~~~ 223 (477)
T TIGR01301 215 LSAVKENPL 223 (477)
T ss_pred eeeeeccCC
Confidence 998887653
No 224
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.31 E-value=4e-06 Score=91.06 Aligned_cols=136 Identities=10% Similarity=0.053 Sum_probs=101.1
Q ss_pred ccCchhHHHHHHHHhhhhhhcc-ccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCC
Q 043156 365 LPILPILFMILAVPVYDRIFVP-FAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQP 443 (578)
Q Consensus 365 ~~~~~~i~~il~~~l~~~l~~~-l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (578)
+.........+..++.+++.|| +++| +.+.+|.+++.++.+.+++..
T Consensus 55 i~~~~~~~~~~~~~~~G~laDr~~G~r-----------~~~~~g~~~~~~g~~~~~~~~--------------------- 102 (489)
T PRK10207 55 TFGAFAALVYGLISIGGYVGDHLLGTK-----------RTIVLGAIVLAIGYFMTGMSL--------------------- 102 (489)
T ss_pred HHHHHHHHHHHHHhhHHHhhhhccchH-----------HHHHHHHHHHHHHHHHHHHhc---------------------
Confidence 3334445566667789999998 7887 578889999999988877643
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCch--hhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCc
Q 043156 444 LPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKG--IKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWL 521 (578)
Q Consensus 444 ~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~--~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~ 521 (578)
. ....+....++.++|.++..|...+++.+.+|++ .|+.+.+.+.+..++|..+|+.+.+.+.+
T Consensus 103 -~-~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~------------ 168 (489)
T PRK10207 103 -L-KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIAD------------ 168 (489)
T ss_pred -c-chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHH------------
Confidence 1 1122335677889999999999999999999887 45889999999999999999999998862
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHhhh
Q 043156 522 AGNNINRNHLNLFFWLLSALSFINFSVYLFM 552 (578)
Q Consensus 522 ~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 552 (578)
+ .+|++.|++.++..+++++.++..
T Consensus 169 ---~---~gw~~~F~i~~i~~~~~~~~~~~~ 193 (489)
T PRK10207 169 ---K---FGYSVTYNLCGAGLIIALLVYFAC 193 (489)
T ss_pred ---h---hChHHHHHHHHHHHHHHHHHHHHc
Confidence 1 246678888666555555555544
No 225
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.27 E-value=6.6e-05 Score=79.10 Aligned_cols=142 Identities=11% Similarity=0.134 Sum_probs=100.2
Q ss_pred CcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCC
Q 043156 363 ASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQ 442 (578)
Q Consensus 363 ~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (578)
+.....+-..=+++-++..+++.++++- +.+..|+.+..+=++.....+
T Consensus 409 Gv~~a~~~~gEI~~~ffs~klI~kiGHv-----------~v~~lgLa~~~~Rf~~~S~L~-------------------- 457 (618)
T KOG3762|consen 409 GVVSALCHAGEILFYFFSFKLIEKIGHV-----------NVMYLGLACNVGRFLYYSYLQ-------------------- 457 (618)
T ss_pred eehhhhhccchHHHHHHHHHHHHHhccc-----------ceeeehhhHHHHHHHHHHHhc--------------------
Confidence 3444555555566667777777666554 456677777777777777765
Q ss_pred CccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHH-HHHHHHHHHHHHHhhhccccCccCCCCCc
Q 043156 443 PLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCS-MALGYFFSTILVNIVNSATRGITQSGGWL 521 (578)
Q Consensus 443 ~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~-~~ig~~lg~~~~~~~~~~~~~~~~~~~~~ 521 (578)
++|..++.=++.|+...+.+.+..+|+...+|++.|.+++|+.... -.+|-.+|+.+.|.+...
T Consensus 458 ----n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~----------- 522 (618)
T KOG3762|consen 458 ----NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVER----------- 522 (618)
T ss_pred ----CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhee-----------
Confidence 7777777779999999999999999999999999999999987644 345555666665554421
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHhhhccccc
Q 043156 522 AGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYN 557 (578)
Q Consensus 522 ~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~ 557 (578)
-+-+..|+.+++.+++.++.+..+.+..+
T Consensus 523 -------fg~~ttf~~~giAcl~~l~~~~~iq~~l~ 551 (618)
T KOG3762|consen 523 -------FGARTTFRIFGIACLVTLALFISIQLLLK 551 (618)
T ss_pred -------ehhHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 12235688888888887777766654443
No 226
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.27 E-value=6.3e-06 Score=84.69 Aligned_cols=169 Identities=14% Similarity=0.125 Sum_probs=135.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccC
Q 043156 34 AFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFD 113 (578)
Q Consensus 34 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~ 113 (578)
--+...+++++--..+-+|--+.+|++..+...++.....+..++....|++..|-.+++++..+++.+..++..+.+
T Consensus 216 fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii-- 293 (403)
T PF03209_consen 216 FLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALII-- 293 (403)
T ss_pred HHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHH--
Confidence 344556677777788889999999999999999999999999999999999988555999988888888776654431
Q ss_pred CCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcc
Q 043156 114 PTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQD 193 (578)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~ 193 (578)
..+...+.+.+..+.+++|++.|.+.....+.+-|..++++ -+..+|.+..+..++..+|-.++|.+.|
T Consensus 294 -----~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------aG~~mG~WGaaQA~A~Glg~~~GG~~~D 362 (403)
T PF03209_consen 294 -----LAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------AGLFMGAWGAAQAIARGLGTFLGGALRD 362 (403)
T ss_pred -----HHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11333567788999999999999999888888999998776 6999999999999999999988887743
Q ss_pred ----------ccCchhHHHHHHHHHHHHHHHH
Q 043156 194 ----------NKGWDRGFGLSSVAVFLATIIF 215 (578)
Q Consensus 194 ----------~~g~~~~f~i~~~~~~~~~~~~ 215 (578)
..+|-.+|.+-++..++++.+.
T Consensus 363 ~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 363 LVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 1347778887777766665544
No 227
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.27 E-value=7.7e-06 Score=86.25 Aligned_cols=162 Identities=20% Similarity=0.085 Sum_probs=122.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccC
Q 043156 27 TSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLP 106 (578)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~ 106 (578)
....+++..++...++....+...-|.+-.+|.+.....+.......+..++.++...+++|+ ||||++.++.++.+++
T Consensus 237 p~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i~ 315 (467)
T COG2211 237 PLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAVG 315 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHHH
Confidence 344455566666666666666677777788898888888888888888888899999999998 9999999999998877
Q ss_pred CcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhh-hhhHHHHHHHHHHHHHHHHH
Q 043156 107 PPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQ-MSSFFNLLFLAVCIGGAISV 185 (578)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~-R~~~~~~~~~~~~lG~~~~p 185 (578)
.+...+ .-..+..++++..++.++|.+...+...++++|..+-.|-+--+| -|..++.+.+..-+|.+++.
T Consensus 316 ~~~~~f--------~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~ 387 (467)
T COG2211 316 YLLLYF--------TPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAG 387 (467)
T ss_pred HHHHHh--------hcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHH
Confidence 655411 114567788888899999999999999999999887543211112 24455667888888999998
Q ss_pred HHHHHhccccCc
Q 043156 186 TLIVWIQDNKGW 197 (578)
Q Consensus 186 ~l~~~l~~~~g~ 197 (578)
.+.|++....||
T Consensus 388 ~~~g~~L~~~Gy 399 (467)
T COG2211 388 FIPGWILGAIGY 399 (467)
T ss_pred HHHHHHHHHcCC
Confidence 888888665554
No 228
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.26 E-value=4e-06 Score=90.87 Aligned_cols=184 Identities=10% Similarity=0.002 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH----HHHHHHHHHHHHHHHHhHHHH----Hhhhccchhhhh--hh
Q 043156 29 LLILAAFGFENLATIALGVNLVTYFNGVLHLDLAE----AANQVTNYMGTSYILSIVVAL----LADAFIGRFKAV--LI 98 (578)
Q Consensus 29 ~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~----~~~~~~~~~~~~~~~~~~~G~----laD~~~Grr~~~--~~ 98 (578)
..++....+....|.-..+.++.|.+++.+.+... .+++.+...+...+..++..+ +.||-.+.+... .+
T Consensus 275 l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~ 354 (475)
T TIGR00924 275 IVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTL 354 (475)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHH
Confidence 33344444445555555566788877765544322 567777777777777766554 455411223322 45
Q ss_pred hhhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHH
Q 043156 99 SGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVC 178 (578)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~ 178 (578)
|.++..++.....+.... .......+.+.+++..++.++|+....|...+++.+..|++. |++.++++.....
T Consensus 355 G~~l~~~~~~~~~~~~~~-~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~------~g~~~g~~~l~~~ 427 (475)
T TIGR00924 355 GMLFCGASFLTFAASIWF-ADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL------MGQMLGMWFLAQA 427 (475)
T ss_pred HHHHHHHHHHHHHHHHhh-cCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH------HHHHHHHHHHHHH
Confidence 666655443332000000 000113578888999999999999999999999999999886 9999999999999
Q ss_pred HHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcC
Q 043156 179 IGGAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGL 219 (578)
Q Consensus 179 lG~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~ 219 (578)
+|..+++.+.....+..+|...|...++..++..++.+...
T Consensus 428 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (475)
T TIGR00924 428 MGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMV 468 (475)
T ss_pred HHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888777767888888877776665555554433
No 229
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.26 E-value=6.6e-06 Score=88.59 Aligned_cols=140 Identities=9% Similarity=0.026 Sum_probs=98.3
Q ss_pred cccCchhHHHHHHHHhhhhhhccc-cccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCC
Q 043156 364 SLPILPILFMILAVPVYDRIFVPF-AGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQ 442 (578)
Q Consensus 364 ~~~~~~~i~~il~~~l~~~l~~~l-~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (578)
.+.........+..++.+++.||+ ++| +.+.+|.+++.++.++++...
T Consensus 49 ~i~~~~~~~~~l~~ligG~LaDRilGrr-----------r~iliG~il~~lg~lll~~~~-------------------- 97 (493)
T PRK15462 49 ELFSAYCSLVYVTPILGGFLADKVLGNR-----------MAVMLGALLMAIGHVVLGASE-------------------- 97 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcH-----------HHHHHHHHHHHHHHHHHHHhh--------------------
Confidence 344444566677777899999998 776 467788888888876554321
Q ss_pred CccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCch--hhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCC
Q 043156 443 PLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKG--IKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGW 520 (578)
Q Consensus 443 ~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~--~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~ 520 (578)
. +...+.....+..+|.++..+...++..+.+|++ .|+++.++.....++|+.++|.+.+.+..
T Consensus 98 --~-~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~----------- 163 (493)
T PRK15462 98 --I-HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQE----------- 163 (493)
T ss_pred --c-chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHh-----------
Confidence 0 1112233344555666677777788899999986 79999999999999999999999988752
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhccc
Q 043156 521 LAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSR 555 (578)
Q Consensus 521 ~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~ 555 (578)
..+|++.|...++..+++++.+++..++
T Consensus 164 -------~~Gw~~~F~iaaigm~l~li~~~~~~~~ 191 (493)
T PRK15462 164 -------EYSWAMGFGLAAVGMIAGLVIFLCGNRH 191 (493)
T ss_pred -------hhChHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 1346778888777667766666554333
No 230
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.24 E-value=1.5e-05 Score=76.52 Aligned_cols=95 Identities=19% Similarity=0.210 Sum_probs=70.9
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhHHHH
Q 043156 51 TYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLF 130 (578)
Q Consensus 51 ~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (578)
.|+-+++|+...++|.+...-.....+...+.|-|+|+- |||+.-+.-++.+.+. |..-.++.+-.++
T Consensus 61 YyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvtycitYiLs-----------CiTKhSpqYkVLm 128 (454)
T KOG4332|consen 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCITYILS-----------CITKHSPQYKVLM 128 (454)
T ss_pred eeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceeeehHHHHHH-----------HHhhcCCceEEEe
Confidence 456678899999999888777777888888889999997 9999776666555521 3334567778899
Q ss_pred HHHHHHHHhccccccccc-cccccCCCC
Q 043156 131 VALYLIATGTAGIKAALP-PYGADQFDE 157 (578)
Q Consensus 131 ~~~~l~g~g~g~~~~~~~-~~v~~~~~~ 157 (578)
++|++.|+..+....+.- =+++|.-.+
T Consensus 129 VGR~LGGiaTsLLFSaFEsWliaEHnek 156 (454)
T KOG4332|consen 129 VGRVLGGIATSLLFSAFESWLIAEHNEK 156 (454)
T ss_pred ehhhhhhHHHHHHHHHHHHHHHHHhhhc
Confidence 999999999887666543 356666543
No 231
>PRK11462 putative transporter; Provisional
Probab=98.18 E-value=8.5e-06 Score=87.94 Aligned_cols=160 Identities=15% Similarity=0.094 Sum_probs=92.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCC
Q 043156 28 SLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPP 107 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~ 107 (578)
...++...++..............|.+..+| +....+.+...+.++..++.+++++++||+ |||+++..+..+..+..
T Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g-~~~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~~ 307 (460)
T PRK11462 230 WRIVGLLTIFNILAVCVRGGAMMYYVTWILG-TPEVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVIS 307 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhhhhhcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHH
Confidence 3333334444444433333333333333344 344456677788888999999999999998 99988765544333211
Q ss_pred cccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhh-hhHHHHHHHHHHHHHHHHHH
Q 043156 108 PCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQM-SSFFNLLFLAVCIGGAISVT 186 (578)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R-~~~~~~~~~~~~lG~~~~p~ 186 (578)
++. .... ..+...+++..++.+++.+...+...++++|..+.+|-+-.+|| +..++...+...+|..+++.
T Consensus 308 ~~~-------~~~~-~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~ 379 (460)
T PRK11462 308 LAM-------FFVP-MQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGA 379 (460)
T ss_pred HHH-------HHhc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 111 0001 12222334444556777777666667788887773321110112 33356677889999999999
Q ss_pred HHHHhccccCc
Q 043156 187 LIVWIQDNKGW 197 (578)
Q Consensus 187 l~~~l~~~~g~ 197 (578)
++|++.+..||
T Consensus 380 i~g~iL~~~Gy 390 (460)
T PRK11462 380 LIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHcCC
Confidence 99888765455
No 232
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.17 E-value=1.6e-05 Score=78.91 Aligned_cols=146 Identities=21% Similarity=0.192 Sum_probs=107.9
Q ss_pred HHHHHHHHHhcCCCH--HHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccc
Q 043156 47 VNLVTYFNGVLHLDL--AEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGS 124 (578)
Q Consensus 47 ~~l~~yl~~~lg~s~--~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (578)
...+.+ ..+++.+. ...++..+.+.+...++.++.|.++||+ |||+.+..+......+.++. ......
T Consensus 23 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~--------~~~~~~ 92 (338)
T COG0477 23 PALPLL-LSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLL--------ALAPNV 92 (338)
T ss_pred HHHHHH-HHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHH--------HhCccc
Confidence 344444 34555454 5789999999999999999999999998 99988888876533332221 001013
Q ss_pred hhHHHHHHHHHHHHhccccccccccccccCCCC-CChHHHhhhhhHHHHHHH-HHHHHHHHHHHHHHHhccc--cCchhH
Q 043156 125 DAALLFVALYLIATGTAGIKAALPPYGADQFDE-KDPIEARQMSSFFNLLFL-AVCIGGAISVTLIVWIQDN--KGWDRG 200 (578)
Q Consensus 125 ~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~-~~~~~~~~R~~~~~~~~~-~~~lG~~~~p~l~~~l~~~--~g~~~~ 200 (578)
....+++.|.+.|++.+...+...+++.|.+|+ ++ |+...+.... ...+|..++|.+++.+... .+|+..
T Consensus 93 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (338)
T COG0477 93 GLALLLILRLLQGLGGGGLLPVASALLSEWFPEATE------RGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAA 166 (338)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH
Confidence 577888999999999999999999999999997 33 8998888777 5888889998777776653 578886
Q ss_pred HHHHHHHH
Q 043156 201 FGLSSVAV 208 (578)
Q Consensus 201 f~i~~~~~ 208 (578)
|.+.....
T Consensus 167 ~~~~~~~~ 174 (338)
T COG0477 167 FLLAALLG 174 (338)
T ss_pred HHHHHHHH
Confidence 66655443
No 233
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.16 E-value=1.9e-05 Score=86.06 Aligned_cols=131 Identities=12% Similarity=0.091 Sum_probs=95.5
Q ss_pred HHHHHHhhhhhhcc-ccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHH
Q 043156 373 MILAVPVYDRIFVP-FAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWL 451 (578)
Q Consensus 373 ~il~~~l~~~l~~~-l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (578)
.....++.+++.|| +++| +.+.+|.++.+++.+++++.. .+.+.+
T Consensus 70 ~~~~~~~~G~LaDr~~G~r-----------~~~~~g~~~~~ig~~l~~~~~-----------------------~~~~~l 115 (500)
T PRK09584 70 VYGLVAIGGWLGDKVLGTK-----------RVIMLGAIVLAIGYALVAWSG-----------------------HDAGIV 115 (500)
T ss_pred HHHHHHHHHHHHHhccchH-----------HHHHHHHHHHHHHHHHHHHhc-----------------------ccHHHH
Confidence 34445678899988 4777 467778888888877666532 123344
Q ss_pred HHHHHHHHHHHHHHhhhhhheeeccCCchh--hHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcc
Q 043156 452 SIQFFIFGIADMFTYVGLLEFFYSEAPKGI--KSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRN 529 (578)
Q Consensus 452 i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~--rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (578)
....++.+++.++..|...++..+..|++. |+.+.+++++..++|..+++.+.+.+.+ ..
T Consensus 116 ~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~------------------~~ 177 (500)
T PRK09584 116 YMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAA------------------KY 177 (500)
T ss_pred HHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHH------------------hh
Confidence 556677889998888888889999998653 4567888999999999999999988762 12
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhccc
Q 043156 530 HLNLFFWLLSALSFINFSVYLFMSSR 555 (578)
Q Consensus 530 ~~~~~f~~~~~~~~i~~i~~~~~~~~ 555 (578)
+|++.|...++..+++++.+++..+.
T Consensus 178 g~~~~F~i~~i~~~i~~i~~~~~~~~ 203 (500)
T PRK09584 178 GWSVAFALSVVGMLITVVNFAFCQRW 203 (500)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 46788888887777777666655433
No 234
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.13 E-value=3.3e-05 Score=75.46 Aligned_cols=158 Identities=14% Similarity=0.061 Sum_probs=103.5
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccc-cch
Q 043156 47 VNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIE-GSD 125 (578)
Q Consensus 47 ~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 125 (578)
+.....+++.+|+|++|.+.+...-.++..++ ++.|.+.|++ |.+.++.+|.+...+|..++- ....... ...
T Consensus 22 s~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~----l~~~~~i~~~~ 95 (250)
T PF06813_consen 22 SAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLW----LAVSGRIPSLP 95 (250)
T ss_pred hhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHHHHHHHHHH----HHHhCccCccc
Confidence 33446789999999999999999999998875 8889999998 999999999998887654420 0011111 235
Q ss_pred hHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccCchhHHHHHH
Q 043156 126 AALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGLSS 205 (578)
Q Consensus 126 ~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i~~ 205 (578)
.+.+.+...+.+.+.+...++......+-||. + |+++.++.-....+++.+-..+-..+.+.-.-...+++..
T Consensus 96 ~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~------RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~ 168 (250)
T PF06813_consen 96 VWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-S------RGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAV 168 (250)
T ss_pred hHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-c------cCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 55666666666666666656655556678885 4 9999999777776666655444444433322233333444
Q ss_pred HHHHHHHHHHHh
Q 043156 206 VAVFLATIIFAA 217 (578)
Q Consensus 206 ~~~~~~~~~~~~ 217 (578)
...+++++...+
T Consensus 169 ~~~~v~l~~~~~ 180 (250)
T PF06813_consen 169 LPAVVCLVAMFF 180 (250)
T ss_pred HHHHHHHHHhhh
Confidence 444444444433
No 235
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.10 E-value=2.3e-05 Score=87.72 Aligned_cols=175 Identities=9% Similarity=0.088 Sum_probs=117.8
Q ss_pred CCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHH--Hhhh----------
Q 043156 362 PASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIR--KDVA---------- 429 (578)
Q Consensus 362 ~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~--~~~~---------- 429 (578)
.+++.+.+.+...+..++.+.+.+|..|| +.+.+|.++++++.++.++..-.. +...
T Consensus 70 ~G~i~s~~~i~~~~~~i~v~~~~~r~~r~-----------~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~ 138 (633)
T TIGR00805 70 SGLINGSYEIGNLLLIIFVSYFGTKLHRP-----------IVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLS 138 (633)
T ss_pred ceeeeehhhHHHHHHHHHHHHhhcccCcc-----------eEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccc
Confidence 46677778888899999999998887766 568889999999998877653111 0000
Q ss_pred --hhcCccCC-------C----CCCCCc--cchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHH
Q 043156 430 --RDHNMLDA-------I----PVVQPL--PISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMA 494 (578)
Q Consensus 430 --~~~~~~~~-------~----~~~~~~--~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ 494 (578)
+..-|.+. + .+.... ...+..+++.-++.|+|++...+...+++.+.+|++.|+.+.|+++....
T Consensus 139 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~ 218 (633)
T TIGR00805 139 SANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAV 218 (633)
T ss_pred ccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHH
Confidence 00001100 0 000011 12345566778999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccccC----------cc-CCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhcc
Q 043156 495 LGYFFSTILVNIVNSATRG----------IT-QSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSS 554 (578)
Q Consensus 495 ig~~lg~~~~~~~~~~~~~----------~~-~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 554 (578)
+|..+|+.+.+.+.....+ .| ..+.|+ +.|+..|++.+++.++..+.++++-+
T Consensus 219 iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWi-------GaWwl~Fli~g~l~~l~~v~l~~~p~ 282 (633)
T TIGR00805 219 FGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWI-------GAWWIGFLICGGVALLTSIPFFFFPK 282 (633)
T ss_pred hhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHH-------HHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 9999999998877632100 00 001121 24666788888888776665554433
No 236
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.09 E-value=5.5e-08 Score=104.56 Aligned_cols=182 Identities=19% Similarity=0.087 Sum_probs=110.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
|.....+....+..+..+....+...++.+..+.+.. -.......+...++.+++.++.||+ |||++++++.++.++
T Consensus 252 ~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~ 328 (451)
T PF00083_consen 252 KRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAI 328 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-ccccccccccccccc
Confidence 4455555555555454444444444555566777766 2233334456667777888999998 999999999888775
Q ss_pred CCcccccCCCCCccccccc---hhHHHHHHHHHHHHhcc-ccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHH
Q 043156 106 PPPCNVFDPTAGCKKIEGS---DAALLFVALYLIATGTA-GIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGG 181 (578)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~g~g~g-~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~ 181 (578)
..+.+. .........+ +...+ +...+...+.+ ...+....+.+|.+|++. |+++.++.+....+++
T Consensus 329 ~~~~~~---~~~~~~~~~~~~~~~~~i-~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~------R~~~~~~~~~~~~i~~ 398 (451)
T PF00083_consen 329 CSLILG---IIFFLGVSSSSWWSILSI-VFLALFFAFFSLGWGPLPWIYTAELFPTKV------RSTGIGLSYAVGRIGG 398 (451)
T ss_pred cccccc---cccccccccccccccccc-eeeeeccccccccccccccccccccccccc------cccccccccccccccc
Confidence 544430 0001111111 22222 22222222222 345667788999999997 9999999999999999
Q ss_pred HHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHhcCC
Q 043156 182 AISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFAAGLP 220 (578)
Q Consensus 182 ~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~ 220 (578)
.++|.+...+.+..+-...|.+.+.+.++..++.++..|
T Consensus 399 ~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lp 437 (451)
T PF00083_consen 399 FIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLP 437 (451)
T ss_pred cccccccccccccccccccchhhHHHHHHHHhheeEEEe
Confidence 999988888877666344555555555555444444333
No 237
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.05 E-value=3.1e-05 Score=61.10 Aligned_cols=68 Identities=21% Similarity=0.150 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhh
Q 043156 34 AFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVE 103 (578)
Q Consensus 34 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~ 103 (578)
..++...+.-.+.++++.|++ +.|+|..++|.+.++..+...+++++.|+++||+ ||+|.++....++
T Consensus 8 ~yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 8 FYFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHHH
Confidence 344444555556789999987 5999999999999999999999999999999998 9998888766544
No 238
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.03 E-value=9e-05 Score=81.03 Aligned_cols=142 Identities=11% Similarity=0.131 Sum_probs=105.2
Q ss_pred CCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCC
Q 043156 362 PASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVV 441 (578)
Q Consensus 362 ~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (578)
..++...+.+...+..|+.+++.|.++|| ..+.+|.++..+|+++.+-.+
T Consensus 80 ~~w~~~~~~l~~av~~~~~G~LSDlfGRr-----------~~~i~g~~l~vvG~Iv~atA~------------------- 129 (599)
T PF06609_consen 80 WSWFSTAWTLASAVSFPFVGRLSDLFGRR-----------YFFIIGSLLGVVGSIVCATAQ------------------- 129 (599)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHHhcch-----------HHHHHHHHHHHhHHHHhhcCC-------------------
Confidence 34677778899999999999999999999 467889999999988877644
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCc
Q 043156 442 QPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWL 521 (578)
Q Consensus 442 ~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~ 521 (578)
+...++....+.|+|.+..... ...+.|..|.+.|+.+.++.....-+...+++.+...+.
T Consensus 130 -----~~~~~iag~~l~GvgaG~~~~~-~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~------------- 190 (599)
T PF06609_consen 130 -----NMNTFIAGMVLYGVGAGVQELA-ALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFA------------- 190 (599)
T ss_pred -----cHHHHHHHHHHHHHhhHHHHHH-HHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhc-------------
Confidence 4556777888888887665543 445789999999988877766554444445555544332
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHhhhccccc
Q 043156 522 AGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYN 557 (578)
Q Consensus 522 ~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~ 557 (578)
...+|+|.|++.+++..++++..+++++..+
T Consensus 191 -----~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~ 221 (599)
T PF06609_consen 191 -----AHSGWRWIFYIFIIWSGIALVLIFFFYFPPP 221 (599)
T ss_pred -----cCCCcchHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 1246789999999998888877777665443
No 239
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.01 E-value=0.00026 Score=73.63 Aligned_cols=154 Identities=15% Similarity=0.080 Sum_probs=105.4
Q ss_pred HHHHHHHHHh-cCCCHHHHH-HHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccc
Q 043156 47 VNLVTYFNGV-LHLDLAEAA-NQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGS 124 (578)
Q Consensus 47 ~~l~~yl~~~-lg~s~~~~~-~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (578)
+++..|+.++ .|++..|.. -+.-..+-.+....++...+.|.. |-|++++++.+.......++ ....
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~i~t~~ll----------l~~~ 92 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSYIITWLLL----------LFGT 92 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHH----------HHHC
Confidence 5788999987 899998875 455555667778888999999996 88999888877655443332 3346
Q ss_pred hhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcc--ccCchhHHH
Q 043156 125 DAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQD--NKGWDRGFG 202 (578)
Q Consensus 125 ~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~--~~g~~~~f~ 202 (578)
+...+-+.-+.-|++.+. ..+.++++=...|+++ --++.++...+.-+|-.+|..++-.+.. ..+++...+
T Consensus 93 sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~------yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~ 165 (412)
T PF01770_consen 93 SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEH------YQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNY 165 (412)
T ss_pred cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 666666666666666554 3444555555555543 5666777888888888888877766654 334677777
Q ss_pred HHHHHHHHHHHHHHhc
Q 043156 203 LSSVAVFLATIIFAAG 218 (578)
Q Consensus 203 i~~~~~~~~~~~~~~~ 218 (578)
+......++++..++.
T Consensus 166 isl~~~~~a~~~~~fL 181 (412)
T PF01770_consen 166 ISLASVSLALLIALFL 181 (412)
T ss_pred HHHHHHHHHHHHHHHc
Confidence 7776666666554443
No 240
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.01 E-value=8.4e-06 Score=88.16 Aligned_cols=147 Identities=12% Similarity=-0.115 Sum_probs=110.4
Q ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhHHHHHH
Q 043156 53 FNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVA 132 (578)
Q Consensus 53 l~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (578)
.++.+|+++.+.|.+.....++..++..+.+++.+|+ +.|+++.++.++..++.+...+...........++...+...
T Consensus 279 ~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~ 357 (468)
T TIGR00788 279 TTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGD 357 (468)
T ss_pred EcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeeh
Confidence 3467999999999999999999999999999999997 999999999988885543320000000000001222234455
Q ss_pred HHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccccC-----chhHHHHHHH
Q 043156 133 LYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDNKG-----WDRGFGLSSV 206 (578)
Q Consensus 133 ~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~~g-----~~~~f~i~~~ 206 (578)
-++.+++.+........++.+..|+++ +++.++++....|+|..+++.+++++.++.| ++..+.+..+
T Consensus 358 ~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i 430 (468)
T TIGR00788 358 SIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILG 430 (468)
T ss_pred hHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHH
Confidence 667788888888888999999999987 8999999999999999999999999988766 5555544333
No 241
>PTZ00207 hypothetical protein; Provisional
Probab=97.96 E-value=0.00012 Score=80.49 Aligned_cols=133 Identities=12% Similarity=0.112 Sum_probs=97.1
Q ss_pred HHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHH
Q 043156 375 LAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQ 454 (578)
Q Consensus 375 l~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 454 (578)
.+.++.+.+.|++++| +.+.+|.++.+++.++.++... .....+.+.+.+.
T Consensus 76 ~~~lp~G~L~Dr~G~R-----------~vllig~ll~~iG~ll~ala~~------------------~~i~~s~~~l~l~ 126 (591)
T PTZ00207 76 YFLLPYSFIYDYLGPR-----------PIFVLSMTVFCLGTLLFALTFQ------------------EVIEGSVVRLSVY 126 (591)
T ss_pred HHHHHHHHHHHHhCcH-----------HHHHHHHHHHHHHHHHHHHHhc------------------ccccCcHHHHHHH
Confidence 3455678899888888 5778899999999988877530 0112367777888
Q ss_pred HHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHH
Q 043156 455 FFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLF 534 (578)
Q Consensus 455 ~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (578)
.++.|+|++...+.....+.+.+| +.||.+.|+......+|+.+.+.+...+.. .+++.+
T Consensus 127 r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-------------------~~~~~~ 186 (591)
T PTZ00207 127 NGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-------------------DNTSAY 186 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------HhHHHH
Confidence 889999999888888888889887 679999999999999999865444433321 123456
Q ss_pred HHHHHHHHHHHHHHHhhhcccc
Q 043156 535 FWLLSALSFINFSVYLFMSSRY 556 (578)
Q Consensus 535 f~~~~~~~~i~~i~~~~~~~~~ 556 (578)
|++.+++.++..++.+.+.+..
T Consensus 187 fl~l~vl~~vv~ll~~~~vr~p 208 (591)
T PTZ00207 187 FFFLMSFALVVGILAIVFMRLP 208 (591)
T ss_pred HHHHHHHHHHHHHHHHhheeCC
Confidence 7777877777666666655433
No 242
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.95 E-value=0.00013 Score=77.13 Aligned_cols=110 Identities=8% Similarity=0.064 Sum_probs=93.1
Q ss_pred CCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCC
Q 043156 362 PASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVV 441 (578)
Q Consensus 362 ~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (578)
.+.+...-.....+.....+.+.||++.| +.+.++.+..++..++.++..
T Consensus 64 ~G~I~s~F~ysYal~qIp~GlLaDrlG~K-----------~vL~l~~l~Wsl~t~L~~fa~------------------- 113 (511)
T TIGR00806 64 TNEIIPVLPYSHLAVLVPVFLLTDYLRYK-----------PVLVLQALSFVCVWLLLLLGT------------------- 113 (511)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhCch-----------HHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 34455556677788888889999988888 467777777777777777754
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043156 442 QPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIV 507 (578)
Q Consensus 442 ~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~ 507 (578)
+.+.+.+.-+++|++|+... +.+.++++.+|++.|+++.|.++....+|.++++.+.+.+
T Consensus 114 -----Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll 173 (511)
T TIGR00806 114 -----SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL 173 (511)
T ss_pred -----HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67788888899999999988 9999999999999999999999999999999999999874
No 243
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.90 E-value=1.1e-05 Score=84.89 Aligned_cols=172 Identities=10% Similarity=-0.053 Sum_probs=134.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCccc
Q 043156 31 ILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCN 110 (578)
Q Consensus 31 l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~ 110 (578)
.++..++..++.-.+.+++--++ ++++-.+.--|.+......+-++.-++.+++-.++ |+-+++..++..+.+=.+..
T Consensus 376 ff~~av~mG~g~~lv~tFLfWHl-ed~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~ 453 (618)
T KOG3762|consen 376 FFFVAVVMGAGVGLVFTFLFWHL-EDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYY 453 (618)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH-hhcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHH
Confidence 34444455555555566665444 56676666777777777788888899999999997 99999999988877433332
Q ss_pred ccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHH-HHHHHHHHHHHHHH
Q 043156 111 VFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFL-AVCIGGAISVTLIV 189 (578)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~-~~~lG~~~~p~l~~ 189 (578)
..-.|+|+.+..-+++|+..+..+.++.+++++..|++- |+++-++... .-.+|-.+|.+++|
T Consensus 454 ----------S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l------~at~Q~l~~g~f~GlG~g~GslIGG 517 (618)
T KOG3762|consen 454 ----------SYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGL------RATAQGLLQGIFHGLGKGLGSLIGG 517 (618)
T ss_pred ----------HHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc------hHHHHHHHHHHhcccCcchhhhhhh
Confidence 344788999999999999999999999999999999997 8888888555 45889999999999
Q ss_pred HhccccCchhHHHHHHHHHHHHHHHHHhcCC
Q 043156 190 WIQDNKGWDRGFGLSSVAVFLATIIFAAGLP 220 (578)
Q Consensus 190 ~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~ 220 (578)
.+.+.+|-+..|.+.++.+++.++......+
T Consensus 518 ~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~ 548 (618)
T KOG3762|consen 518 FVVERFGARTTFRIFGIACLVTLALFISIQL 548 (618)
T ss_pred hhheeehhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999899899999888877776665554443
No 244
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.87 E-value=8.2e-05 Score=76.05 Aligned_cols=155 Identities=20% Similarity=0.124 Sum_probs=112.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCC
Q 043156 28 SLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPP 107 (578)
Q Consensus 28 ~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~ 107 (578)
.+...+..|+---.--.+..+++.|+.+..|.+..++...++.+..+..++..++-++-.|+ ...|.+.+..++..+-.
T Consensus 238 ~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~ill~ 316 (422)
T COG0738 238 LRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAILLL 316 (422)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHH
Confidence 33333344443333344567899999988999999999999999999999999999998897 88898887765444111
Q ss_pred cccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 043156 108 PCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTL 187 (578)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l 187 (578)
+.. ....+. .-+...++.|+..++.+|...++..+..|++. +.-|..-.+..+|+++-|.+
T Consensus 317 ~~~----------~l~~g~-v~~~~l~~ig~F~simfPTIfslal~~l~~~t--------s~~s~~l~maivGGAiiP~l 377 (422)
T COG0738 317 LAV----------ALIGGV-VALYALFLIGLFNSIMFPTIFSLALKNLGEHT--------SVGSGLLVMAIVGGAIIPPL 377 (422)
T ss_pred HHH----------HHhcCh-HHHHHHHHHHHHhHHHHHHHHHHHHhccCccc--------cccceeeeeheecchHHHHH
Confidence 110 122333 23445667788999999999999999999543 33333344678899999999
Q ss_pred HHHhccccCchhHHH
Q 043156 188 IVWIQDNKGWDRGFG 202 (578)
Q Consensus 188 ~~~l~~~~g~~~~f~ 202 (578)
.|++.|..|-...+.
T Consensus 378 ~G~i~d~~g~~~~~~ 392 (422)
T COG0738 378 QGVIADMFGIQLTFL 392 (422)
T ss_pred HHHHHHhhhhHHHHH
Confidence 999999998777766
No 245
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.86 E-value=0.0032 Score=63.86 Aligned_cols=119 Identities=9% Similarity=0.039 Sum_probs=75.3
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhc-cccCccCCC-CCcCCC
Q 043156 447 STFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNS-ATRGITQSG-GWLAGN 524 (578)
Q Consensus 447 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~-~~~~~~~~~-~~~~~~ 524 (578)
.....+..+.+.+..........+++.++++|++..|++|.+.|...++|+.-=..+...+.+ .|.++-... +-+. .
T Consensus 368 ~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~C~~~t~~~~-c 446 (510)
T KOG3574|consen 368 YYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQCVLATNKVT-C 446 (510)
T ss_pred hHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCceeecccccccee-e
Confidence 334555567777777777788889999999999999999999999999887655555444432 221100000 0000 0
Q ss_pred C----------CCc---chhHHHHHHHHHHHHHHHHHHhhhccccccccccccCC
Q 043156 525 N----------INR---NHLNLFFWLLSALSFINFSVYLFMSSRYNYRPQTSVGG 566 (578)
Q Consensus 525 ~----------~~~---~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~ 566 (578)
. +.. -..+.+|....++.+++.+.+.++.++.++.+++-.+.
T Consensus 447 ~~~~~~~~c~~l~gtc~~~~DGYyi~s~ici~ig~i~~~~~~~ki~~Lq~~p~ss 501 (510)
T KOG3574|consen 447 ITKAFPQLCLALGGTCLIARDGYYITSIICIVIGFIWFGLLKPKIKYLQKLPISS 501 (510)
T ss_pred ecchHHHHHHHhcCEEEEEecceEEeeehhhhHHHHHHHHHHHHHHHHHhCCccc
Confidence 0 000 01233477777778888888888888887776665543
No 246
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.83 E-value=1.8e-05 Score=85.06 Aligned_cols=165 Identities=13% Similarity=0.068 Sum_probs=109.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhh----ccchhhhhhhhhh
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADA----FIGRFKAVLISGS 101 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~----~~Grr~~~~~~~~ 101 (578)
..+|...+..++....-|++..++|.|+++..|+|..+++.+...+.+++.++.+++|+++|| . .+|..+.....
T Consensus 273 p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~-~~~~~~~~~~~ 351 (495)
T KOG2533|consen 273 PGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIF-ARRLLFIVFLC 351 (495)
T ss_pred hhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhH-HHHHHHHHHHH
Confidence 457888889999999999999999999998678999999999999999999999999999999 5 66666666655
Q ss_pred hhc-cCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHH
Q 043156 102 VEF-LPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIG 180 (578)
Q Consensus 102 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG 180 (578)
++. ++...+ ...........+.+....+.....++...-..+...++. +|....+.+..+.+.+
T Consensus 352 ~~~~~g~~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~-----k~~~~~~~~i~~~~s~ 416 (495)
T KOG2533|consen 352 LYAIIGAISL----------LAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNT-----KALTTVSAIIDGTGSA 416 (495)
T ss_pred HHHHHHHHHH----------HhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchH-----HhHHHHhhhhcchhHH
Confidence 554 221221 111212222222222333334444555566666666554 4666666666666655
Q ss_pred HHHHHHH-HHHhccccCchhHHHHHHH
Q 043156 181 GAISVTL-IVWIQDNKGWDRGFGLSSV 206 (578)
Q Consensus 181 ~~~~p~l-~~~l~~~~g~~~~f~i~~~ 206 (578)
+.++|.+ .+.....++|...|+....
T Consensus 417 ~~~~~~~~~~~~ap~y~~~~~f~~~~~ 443 (495)
T KOG2533|consen 417 GAISGQLFRSLDAPRYGWGAVFYMLVA 443 (495)
T ss_pred HHhhhhhcccccCcchhhhhHHHHHHH
Confidence 5555443 3444445788888854433
No 247
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.81 E-value=0.00013 Score=79.93 Aligned_cols=134 Identities=15% Similarity=0.066 Sum_probs=111.0
Q ss_pred CcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCC
Q 043156 363 ASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQ 442 (578)
Q Consensus 363 ~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (578)
+++.....++..++.++.+++.|+++|| ..+.++.++..++.++.++..
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk-----------~~l~~~~~~~~iG~ii~~~a~-------------------- 140 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRK-----------KTLLLAVVLFLIGAIIIALAP-------------------- 140 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhH-----------HHHHHHHHHHHHHHHHHHHhh--------------------
Confidence 5777788899999999999999999999 567888888888888888855
Q ss_pred CccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcC
Q 043156 443 PLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLA 522 (578)
Q Consensus 443 ~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~ 522 (578)
+..+++..=++.|+|.++.......++.|++|++.||...+..++...+|..++ ++.+...
T Consensus 141 ----~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~-------------- 201 (513)
T KOG0254|consen 141 ----SWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGT-------------- 201 (513)
T ss_pred ----hHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhh--------------
Confidence 778899999999999999999999999999999999999999999999888888 4444332
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHH
Q 043156 523 GNNINRNHLNLFFWLLSALSFINFSV 548 (578)
Q Consensus 523 ~~~~~~~~~~~~f~~~~~~~~i~~i~ 548 (578)
.+.. .+|+..+.+..+.+++-.+.
T Consensus 202 -~~~~-~~Wr~~~~~~~i~~~~~~~~ 225 (513)
T KOG0254|consen 202 -SKVY-AGWRIPLGLALIPAVILALG 225 (513)
T ss_pred -ccCC-ccHHHHHHHHHHHHHHHHHH
Confidence 1111 35777787777777777777
No 248
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.80 E-value=8.8e-05 Score=76.76 Aligned_cols=160 Identities=9% Similarity=0.077 Sum_probs=115.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhc---cchhhhhhhhhhh
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAF---IGRFKAVLISGSV 102 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~Grr~~~~~~~~~ 102 (578)
+.++.+..+.+...+++-.-.+++++|++ .+|.+....+.+..+--+.+.+.+|+.|..+||. +||||-++.....
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 77777888888888888888899999985 8899999999999999999999999999999975 4999877655433
Q ss_pred h-ccCCcccccCC---CCCccc----cccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHH
Q 043156 103 E-FLPPPCNVFDP---TAGCKK----IEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLF 174 (578)
Q Consensus 103 ~-~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~ 174 (578)
. +++.++..+.+ ...+.. ........++++..+.=+..-.....+-++.+|.....+ ++.++.+++.
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~-----~~~~Ans~f~ 185 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDA-----KKTRANSVFS 185 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChh-----hhhccchhHH
Confidence 3 33333321110 000100 111345566666666666666667777899999998765 2333999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 043156 175 LAVCIGGAISVTLIVWI 191 (578)
Q Consensus 175 ~~~~lG~~~~p~l~~~l 191 (578)
..+.+|+.+|..+++++
T Consensus 186 ~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 186 FFMAVGNVLGYALGSYL 202 (498)
T ss_pred HHHHhcceeeeeccccc
Confidence 99999999998777744
No 249
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.61 E-value=0.00016 Score=73.26 Aligned_cols=112 Identities=12% Similarity=0.141 Sum_probs=90.4
Q ss_pred CCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCC
Q 043156 362 PASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVV 441 (578)
Q Consensus 362 ~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (578)
.+.+.....+...+..|+++.+.|+++|| ..+.+|.+...++.++.+...
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~SD~yGRk-----------pvll~c~~~va~s~ll~~~S~------------------- 119 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCLSDRYGRK-----------PVLLACLIGVALSYLLWALSR------------------- 119 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhhhhhhCch-----------HHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 45566667788999999999999999998 466777777777776666543
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 043156 442 QPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNS 509 (578)
Q Consensus 442 ~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~ 509 (578)
++..++.+=++.|+..+...+ .-++++|.++++.|+.+++..+.+.++|.++||.+.+++..
T Consensus 120 -----~F~afv~aR~l~Gi~kgnl~v-~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 120 -----NFAAFVLARFLGGIFKGNLSV-IRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred -----HHHHHHHHHHhhhhccCchHH-HHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 554555556778887776655 45899999999999999999999999999999999998864
No 250
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.57 E-value=0.034 Score=58.98 Aligned_cols=188 Identities=8% Similarity=-0.079 Sum_probs=103.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhcc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFL 105 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~ 105 (578)
|..+.+...+++.++.--+.--..+.|+.+-+.-+.--....--.-.+...++.+..|...||. -|.|++..++++.-+
T Consensus 2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~ 80 (432)
T PF06963_consen 2 RALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNL 80 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHH
Confidence 4456677777777777666666677787766543443344444444666778888889999998 999988887766542
Q ss_pred CCccc--ccCCCCCccccc---cchhHHHHHHHHHHHHhcc-ccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHH
Q 043156 106 PPPCN--VFDPTAGCKKIE---GSDAALLFVALYLIATGTA-GIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCI 179 (578)
Q Consensus 106 ~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~l~g~g~g-~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~l 179 (578)
+..+. .+.......... ......+++...+.+.-.- .......+.=-||...=..++...+.+..+...=.--+
T Consensus 81 sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ 160 (432)
T PF06963_consen 81 SVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLF 160 (432)
T ss_pred HHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHH
Confidence 21110 000000000000 1112222222222222111 11222233334443211101112366676666666677
Q ss_pred HHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHH
Q 043156 180 GGAISVTLIVWIQDNKGWDRGFGLSSVAVFLATII 214 (578)
Q Consensus 180 G~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~ 214 (578)
.-++||++.|.+....+.+....+.++..++....
T Consensus 161 ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 161 CKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred HHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHH
Confidence 88899999999998888877776666666655543
No 251
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.49 E-value=7.7e-05 Score=77.23 Aligned_cols=180 Identities=12% Similarity=-0.028 Sum_probs=120.2
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH--------HHHHHHHH-HHHHHhHHHHHhhhccchhh
Q 043156 24 GIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAAN--------QVTNYMGT-SYILSIVVALLADAFIGRFK 94 (578)
Q Consensus 24 ~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~--------~~~~~~~~-~~~~~~~~G~laD~~~Grr~ 94 (578)
|-|..+..+..+|.--+++|+...+...-+ +..|+.+.+... ...+...+ +..+..+..++.|++ |||+
T Consensus 302 hg~~Llgt~~~WFllDiafy~~nL~~s~I~-~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i-GRk~ 379 (538)
T KOG0252|consen 302 HGKHLLGTAGTWFLLDIAFYGQNLFQSVIF-SAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII-GRKY 379 (538)
T ss_pred HHHHHHHHHHHHHhhhhhhhccccHHHHHH-HhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh-hhHH
Confidence 447777788888888888888766554443 455655443332 11111111 222555667889997 9999
Q ss_pred hhhhhhhhhccCCcccccCCCCCcccc-ccchhHHHHHHH-HHHHHhccccccccccccccCCCCCChHHHhhhhhHHHH
Q 043156 95 AVLISGSVEFLPPPCNVFDPTAGCKKI-EGSDAALLFVAL-YLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNL 172 (578)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~ 172 (578)
+-+.+.+++++..+.+ . +... .. +...+++.. +.+.++.-+-......+-+|.||++- |+...|+
T Consensus 380 iq~~GF~~~~i~~~~~----~--~~y~~~~-~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParv------R~t~hGI 446 (538)
T KOG0252|consen 380 IQLMGFFIMTIFFFVI----A--GPYNQLE-NTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARV------RSTCHGI 446 (538)
T ss_pred HHHhhHHHHHHHHHHH----c--CCccccc-ccCceeehHHHHHHHHhcCCCceeEEeehhhchHHH------hhhhhhH
Confidence 9999998888443332 0 1111 11 222222222 22344454555566677899999987 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcc-----ccCchhHHHHHHHHHHHHHHHHHhc
Q 043156 173 LFLAVCIGGAISVTLIVWIQD-----NKGWDRGFGLSSVAVFLATIIFAAG 218 (578)
Q Consensus 173 ~~~~~~lG~~~~p~l~~~l~~-----~~g~~~~f~i~~~~~~~~~~~~~~~ 218 (578)
.-...-.|+++|.....++.+ ..+.+.+|++.+.+.+++.++.++.
T Consensus 447 sAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~ 497 (538)
T KOG0252|consen 447 SAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI 497 (538)
T ss_pred HHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe
Confidence 999999999999999999988 6688999999988888877765543
No 252
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.36 E-value=0.0017 Score=71.34 Aligned_cols=127 Identities=14% Similarity=0.113 Sum_probs=101.9
Q ss_pred cCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCcc
Q 043156 366 PILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLP 445 (578)
Q Consensus 366 ~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (578)
.++..++.+++..+.+.+.|+++|| ..+..++++..++-+..++..
T Consensus 124 ~s~~~~G~~vG~~i~g~lsD~~GRk-----------~~~~~~~~~~~i~~~~~a~a~----------------------- 169 (521)
T KOG0255|consen 124 QSLFFLGVLVGSLIFGPLSDRFGRK-----------PVLLVSLLLFIIFGILTAFAP----------------------- 169 (521)
T ss_pred HHHHHHHHHHHHhhheehHhhcccH-----------HHHHHHHHHHHHHHHHHHHhC-----------------------
Confidence 3444566777777788888888888 466777777777776666644
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCC
Q 043156 446 ISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNN 525 (578)
Q Consensus 446 ~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (578)
+++..++.=++.|++........+.+..|..+++.|+.++.+ ......++.+++.....+.
T Consensus 170 -~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~----------------- 230 (521)
T KOG0255|consen 170 -NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYIT----------------- 230 (521)
T ss_pred -cHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHH-----------------
Confidence 777788888999999999999999999999999999999999 8888888888888777665
Q ss_pred CCcchhHHHHHHHHHHHHHHHHH
Q 043156 526 INRNHLNLFFWLLSALSFINFSV 548 (578)
Q Consensus 526 ~~~~~~~~~f~~~~~~~~i~~i~ 548 (578)
.+|++.++...+.+++.++.
T Consensus 231 ---~~Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 231 ---RDWRWLFWIISIPSGLFLLL 250 (521)
T ss_pred ---hhHHHHHHHHHHHHHHHHHH
Confidence 25778888888888877776
No 253
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.18 E-value=0.026 Score=58.98 Aligned_cols=61 Identities=20% Similarity=0.204 Sum_probs=48.9
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043156 447 STFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIV 507 (578)
Q Consensus 447 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~ 507 (578)
+.|.+....+.-|+-.+..+......+.+..|++.|-.++|.....-++|-.++..+.-.+
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4455555566668888888888888889999999999999999999998888887765433
No 254
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.12 E-value=0.1 Score=55.97 Aligned_cols=158 Identities=9% Similarity=-0.048 Sum_probs=94.9
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CHHHHHHHHHHHHHHHHHH-HhHHHHHhhhccchhhhh
Q 043156 23 GGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHL-----DLAEAANQVTNYMGTSYIL-SIVVALLADAFIGRFKAV 96 (578)
Q Consensus 23 ~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~-----s~~~~~~~~~~~~~~~~~~-~~~~G~laD~~~Grr~~~ 96 (578)
...|+++.+.+..++-.+.|+.+.+ +++.+.. +.+...++-+...+...+. .++-+++++|+ +|+|.+
T Consensus 4 ~E~~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf 77 (472)
T TIGR00769 4 HELKKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALF 77 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhH
Confidence 3456777777777777777776653 4566655 3356777777665554444 78889999998 999988
Q ss_pred hhhhhhhccCCccc--ccCCCCCcccc----------ccc---------hhHHHHHHHHHHHHhcccccc-ccccccccC
Q 043156 97 LISGSVEFLPPPCN--VFDPTAGCKKI----------EGS---------DAALLFVALYLIATGTAGIKA-ALPPYGADQ 154 (578)
Q Consensus 97 ~~~~~~~~~~~~~~--~~~~~~~~~~~----------~~~---------~~~~~~~~~~l~g~g~g~~~~-~~~~~v~~~ 154 (578)
-+....+..-.++. ++-|..-.... ... +.+...+..+...+-.....+ .-.++++|.
T Consensus 78 ~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi 157 (472)
T TIGR00769 78 YTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQI 157 (472)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77655554111110 00000000000 000 011111111222222222222 456789999
Q ss_pred CCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhc
Q 043156 155 FDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQ 192 (578)
Q Consensus 155 ~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~ 192 (578)
++.+| -.|.+++...+.|+|..+|+.+..++.
T Consensus 158 ~t~~q------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 158 TTIDE------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred CCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99887 689999999999999999999988876
No 255
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.99 E-value=0.0067 Score=64.56 Aligned_cols=164 Identities=10% Similarity=0.039 Sum_probs=104.6
Q ss_pred CCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCC
Q 043156 362 PASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVV 441 (578)
Q Consensus 362 ~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (578)
.|+..+...++..+..|+++.+-.|..+ ..+.+.+|.+++.+|-++....+..
T Consensus 73 fG~viaa~slg~~i~~liF~~Ws~k~~~----------~k~Pli~s~ii~~~g~llY~~l~~~----------------- 125 (488)
T KOG2325|consen 73 FGLVIAASSLGHAIFSLIFGIWSNKTGS----------VKKPLIVSFLIAIIGNLLYLALAYV----------------- 125 (488)
T ss_pred hhHHHHHHHHHHHhcchhhcccccccCC----------cccCHHHHHHHHHHHHHHHHHHHhc-----------------
Confidence 3455566788899999999988655442 1256889999999999888665511
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCc
Q 043156 442 QPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWL 521 (578)
Q Consensus 442 ~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~ 521 (578)
+.. ..+++....++.|+|.+-... .=.|++...-.+.|.++++.......+|..+||.+...+....+. +..|.
T Consensus 126 -~~~-~~y~mL~~R~l~Gvg~~n~a~-lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~---G~~i~ 199 (488)
T KOG2325|consen 126 -PNG-VKYLMLVARILTGVGVGNFAV-LRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEK---GFMIL 199 (488)
T ss_pred -ccc-hHHHHHHHHHHcCcCcccHHH-HHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCC---ceEEc
Confidence 111 668888999999998654332 224555544455566666666666667777777666555432211 00122
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccccc
Q 043156 522 AGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYNYRP 560 (578)
Q Consensus 522 ~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~ 560 (578)
+ ++.-+.|...=|+.++++++.+++.+++.++....+
T Consensus 200 ~--~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~ 236 (488)
T KOG2325|consen 200 P--GLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGI 236 (488)
T ss_pred C--cceEEecchHHHHHHHHHHHHHHHHHhheeecccCc
Confidence 1 123344556677788888888888888877765443
No 256
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.96 E-value=0.0041 Score=56.23 Aligned_cols=108 Identities=11% Similarity=0.079 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhcccccc
Q 043156 66 NQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKA 145 (578)
Q Consensus 66 ~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~ 145 (578)
.-+++......+..++++.+.+++ |.|+++++|.+.+.+-... -.-++...++.+-++.|++.+..++
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~-----------~~~~~~~~l~~~s~l~G~~~a~lW~ 108 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIAS-----------FFYPNSYTLYPASALLGFGAALLWT 108 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHH-----------HHhhhHHHHHHHHHHHhhhhHHhhH
Confidence 444455566677778888889997 9999999999988822111 1124567788889999999999999
Q ss_pred ccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 043156 146 ALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWI 191 (578)
Q Consensus 146 ~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l 191 (578)
+...++.+..++++ |++-.+++....+.+.++|.++.-.+
T Consensus 109 aqg~ylt~~s~~~~------~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 109 AQGTYLTSYSTEET------IGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred hhhHHHHHcCCHHH------HhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999777665 88888887777777777776554433
No 257
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.81 E-value=0.0011 Score=69.85 Aligned_cols=135 Identities=13% Similarity=0.114 Sum_probs=103.3
Q ss_pred HHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHH
Q 043156 375 LAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQ 454 (578)
Q Consensus 375 l~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 454 (578)
+...+.+++.||+.-++ +.+.+|.+++.+|.++++... ..+...+.+.
T Consensus 76 ~t~i~GG~laDr~LG~~----------~tI~lGail~~iGh~~L~~~~----------------------~~~~~gl~i~ 123 (498)
T COG3104 76 LTPIIGGWLADRVLGTR----------RTIVLGAILMAIGHLVLAISS----------------------VSGPGGLYIG 123 (498)
T ss_pred HHHHHHHHHHHHhcchh----------HHHHHHHHHHHHHHHHHhccc----------------------cccccHHHHH
Confidence 33444566666555442 567889999999998887732 1244566777
Q ss_pred HHHHHHHHHHHhhhhhheeeccCCchh--hHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchhH
Q 043156 455 FFIFGIADMFTYVGLLEFFYSEAPKGI--KSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHLN 532 (578)
Q Consensus 455 ~~l~g~g~~~~~~~~~~~~~~~~P~~~--rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (578)
.+++++|.++.=|...++..++.|++. |..+.++..+.-++|+++++.+.+.+.. +.+|+
T Consensus 124 L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~------------------~~g~~ 185 (498)
T COG3104 124 LALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAI------------------NYGWH 185 (498)
T ss_pred HHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHH------------------hhCHH
Confidence 888889999999999999999888653 6667888889999999999999988762 13477
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccc
Q 043156 533 LFFWLLSALSFINFSVYLFMSSRYNYR 559 (578)
Q Consensus 533 ~~f~~~~~~~~i~~i~~~~~~~~~~~~ 559 (578)
..|-+.++-..++++.|+...++.+..
T Consensus 186 ~gF~~aavGm~~gl~~f~~~~r~~~~~ 212 (498)
T COG3104 186 VGFGLAAVGMIIGLVIFLLGRRHVKGI 212 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHccchhcCC
Confidence 889999999999999999987776543
No 258
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.38 E-value=0.0039 Score=66.75 Aligned_cols=150 Identities=15% Similarity=0.148 Sum_probs=112.8
Q ss_pred CchhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHH-HHhhhccchhhhhhhhhh
Q 043156 24 GIKTSLLILAAFGFENLATIA-LGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVA-LLADAFIGRFKAVLISGS 101 (578)
Q Consensus 24 ~~r~~~~l~~~~~~~~~~~~~-~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G-~laD~~~Grr~~~~~~~~ 101 (578)
+.|..+.+++..++....-.+ -.-.+..|+...++++..+.+...+...+...++..+.. .+.-.+ |-|+++.+|+.
T Consensus 238 ~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l-~~~~~i~lGl~ 316 (463)
T KOG2816|consen 238 PDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSIL-GEKRLISLGLL 316 (463)
T ss_pred CCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhHhhHHHH
Confidence 345555555544443333221 121345788889999999999999999999999999887 666665 99998888888
Q ss_pred hhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHH
Q 043156 102 VEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGG 181 (578)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~ 181 (578)
...+..++. +.....++.+...++.+ ..+...|+..++++.+.++++ +++.+++....-.+.+
T Consensus 317 ~~~~~~~~~----------af~~~~w~~~~~~v~~~-~~~~~~pa~~s~~s~~v~~~e------~g~v~~~is~i~~l~~ 379 (463)
T KOG2816|consen 317 SEFLQLLLF----------AFATETWMMFAAGVVVA-LAGIVFPAIRAFASILVSPEE------QGKVFGIISGIEGLSG 379 (463)
T ss_pred HHHHHHHHH----------HHhccchhhhHHHHHHH-hhcchhHHHHhHHHhhccccc------ccchhhHHHHHHHHhh
Confidence 777555443 55677777777766644 446778888999999999887 9999999999999999
Q ss_pred HHHHHHHHHh
Q 043156 182 AISVTLIVWI 191 (578)
Q Consensus 182 ~~~p~l~~~l 191 (578)
.++|.+-+.+
T Consensus 380 ~~~~~~~~~i 389 (463)
T KOG2816|consen 380 VVSPALYGNI 389 (463)
T ss_pred hhhHHHHHHH
Confidence 9999887766
No 259
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.31 E-value=0.02 Score=60.00 Aligned_cols=125 Identities=13% Similarity=0.134 Sum_probs=90.7
Q ss_pred hhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCch-
Q 043156 402 QRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKG- 480 (578)
Q Consensus 402 ~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~- 480 (578)
+.+.+|.++..+|++++.....- . ..+...+...+.+...+.++|.++.=|....+..++.+++
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~-----~----------~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~ 66 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIP-----P----------SLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDD 66 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTS-----S----------SC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTT
T ss_pred HhhhHHHHHHHHHHHHhHHHHhc-----c----------hhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccc
Confidence 35678899999999886664410 0 0012234567777888999999999999999999999877
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccc
Q 043156 481 --IKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYNY 558 (578)
Q Consensus 481 --~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~ 558 (578)
.|..+...+....++|+.++....+++.+ +.+|+..|.+.++..++++++++.-.++++.
T Consensus 67 ~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~------------------~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~ 128 (372)
T PF00854_consen 67 DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQ------------------NYGWFLGFGIPAIGMLLALIVFLSGRKRYRK 128 (372)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHH------------------CS-HHHHHHHHHHHHHHHHHHHHCCCCTT--
T ss_pred hhhhhhhHHHHHHHHhhhhHhhcccchhhcc------------------ccchhhhhhHHHHHHHHHHHHHHhCCcCCcC
Confidence 46667778899999999999888777652 1356778999999999999999888777766
Q ss_pred c
Q 043156 559 R 559 (578)
Q Consensus 559 ~ 559 (578)
.
T Consensus 129 ~ 129 (372)
T PF00854_consen 129 V 129 (372)
T ss_dssp S
T ss_pred c
Confidence 5
No 260
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.24 E-value=0.012 Score=47.00 Aligned_cols=65 Identities=11% Similarity=-0.013 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcc
Q 043156 43 IALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPC 109 (578)
Q Consensus 43 ~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~ 109 (578)
|...+.+ +.++++.++|.++.+++.+...+++.++.+...++.++. .+++.+..+++...+..+.
T Consensus 9 FayTplL-P~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ 73 (85)
T PF06779_consen 9 FAYTPLL-PLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAA 73 (85)
T ss_pred HHHHhHh-HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHH
Confidence 3334544 477899999999999999999999999999999999996 8888888888777744433
No 261
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.14 E-value=0.00098 Score=73.01 Aligned_cols=179 Identities=15% Similarity=0.155 Sum_probs=2.9
Q ss_pred CCcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHh----hhh-----h-
Q 043156 362 PASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKD----VAR-----D- 431 (578)
Q Consensus 362 ~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~----~~~-----~- 431 (578)
.+.+...+-+..++...+...+ +.|. ++++.+++|.+++++|.++.+...-.... ... .
T Consensus 40 ~G~i~s~~di~~~~~~~~vsy~----g~~~-------hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~ 108 (539)
T PF03137_consen 40 SGLISSSYDIGSLVVVLFVSYF----GGRG-------HRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSS 108 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----hhhc-------CCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccc
Confidence 4556666666666666666555 3432 45578999999999999887654322111 000 0
Q ss_pred ---cCc--------cCCCC-----CCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHH
Q 043156 432 ---HNM--------LDAIP-----VVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMAL 495 (578)
Q Consensus 432 ---~~~--------~~~~~-----~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~i 495 (578)
+-| .+... .+......++.++++-++.|+|..-.++...+|+-|-++++..+.+.|+...+..+
T Consensus 109 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~l 188 (539)
T PF03137_consen 109 ISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSIL 188 (539)
T ss_dssp -------------------------------------------SSS----------------------------------
T ss_pred cccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhc
Confidence 001 00000 01222234577788889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccc------c----Ccc-CCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccc
Q 043156 496 GYFFSTILVNIVNSAT------R----GIT-QSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYNY 558 (578)
Q Consensus 496 g~~lg~~~~~~~~~~~------~----~~~-~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~ 558 (578)
|-.+|..+.+.+.+.- + ++| +.+.|+ +.|+..|++.+++.++..+.+..+=|+..+
T Consensus 189 GPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~Wv-------GAWWLGfli~g~~~~l~aipl~~FPk~lp~ 255 (539)
T PF03137_consen 189 GPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWV-------GAWWLGFLICGILLFLSAIPLFFFPKKLPG 255 (539)
T ss_dssp --------------------------------------------------------------------------
T ss_pred cHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHH-------HHHHHHHHHHHHHHHHHHHHHHcCCccCCC
Confidence 9999988887665321 0 111 122354 346667888888888877777776555443
No 262
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.06 E-value=0.06 Score=52.73 Aligned_cols=104 Identities=11% Similarity=0.053 Sum_probs=74.8
Q ss_pred HHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHH
Q 043156 376 AVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQF 455 (578)
Q Consensus 376 ~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 455 (578)
++.+.+.+.|+...| ..+.+|.+...+|..+....... .-...+.|.+.+..
T Consensus 52 ~G~~~G~l~d~~gp~-----------~~l~iG~~~~~~GY~~~~l~~~~-----------------~i~~~~~~~~~~~~ 103 (250)
T PF06813_consen 52 FGILAGLLYDRFGPW-----------VVLLIGAVLGFVGYGLLWLAVSG-----------------RIPSLPVWLMCLFL 103 (250)
T ss_pred ccHHHHHHHHhcchH-----------HHHHHHHHHHHHHHHHHHHHHhC-----------------ccCccchHHHHHHH
Confidence 356667777766655 45678888888888776654411 11224666666666
Q ss_pred HHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 043156 456 FIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVN 508 (578)
Q Consensus 456 ~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~ 508 (578)
.+.+.+......+......+-+|+ .||.+.|+......+++.+-+.+...+.
T Consensus 104 ~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 104 FLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred HHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 777778777777777777789985 6999999999999999988887766554
No 263
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.95 E-value=0.034 Score=58.08 Aligned_cols=168 Identities=11% Similarity=0.018 Sum_probs=116.9
Q ss_pred HHHHhHHHHHHHHHHHHHhhhccchhhhhhhccCCCCCCCceeeCCCcccCchhHHHHHHHHhhhhhhccccccccCCCC
Q 043156 317 KIILGMIPIFCCTIVMTLCLAQLQTFSIQQGLTMDTSVTTSFHIPPASLPILPILFMILAVPVYDRIFVPFAGKITGNPT 396 (578)
Q Consensus 317 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~ 396 (578)
+++++.....+...+.|+.-.++.+.+.+.. .... -..+.++...|+..++.+|+.+...||...|++|++
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~l-Gvph-------k~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRR- 102 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSL-GVPH-------KWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRR- 102 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHc-CCCc-------ccccccccccccccceeccccccccccccccccccc-
Confidence 3444444555666677777766666554432 1222 124567777899999999999999999999987665
Q ss_pred CCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeecc
Q 043156 397 GITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSE 476 (578)
Q Consensus 397 ~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~ 476 (578)
.-+.++.+..+++++++++..++-...+++. +.+..+......++.+.+.=++.-..+.+.=++..+.
T Consensus 103 -----PfI~~~s~~i~~~l~Lig~aaDig~~lgd~~-------~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl 170 (498)
T KOG0637|consen 103 -----PFILAGSLLIAVSLFLIGYAADIGLLLGDNE-------RKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADL 170 (498)
T ss_pred -----chHHHhhHHHHHHHhhhhhHhhhhHHhcCCc-------ccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHh
Confidence 5677788888899988888775533332211 1223345556666677777777766777777888888
Q ss_pred CCchhhHH-HHHHHHHHHHHHHHHHHHHHH
Q 043156 477 APKGIKSL-STCFLWCSMALGYFFSTILVN 505 (578)
Q Consensus 477 ~P~~~rg~-~~g~~~~~~~ig~~lg~~~~~ 505 (578)
+-.+.+-+ +.+.+.+...+|+.+|-.+.+
T Consensus 171 ~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 171 ARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred ccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 77777777 999999999999999987765
No 264
>PRK03612 spermidine synthase; Provisional
Probab=95.90 E-value=0.068 Score=58.47 Aligned_cols=177 Identities=11% Similarity=-0.035 Sum_probs=95.5
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhh-hhhhh
Q 043156 24 GIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVL-ISGSV 102 (578)
Q Consensus 24 ~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~-~~~~~ 102 (578)
+.+....+.+...+..+.|= ..+.-.+..-+|-+..+.+.+++.+..+..++..++|+++++. -|+...+ ++..+
T Consensus 15 ~~~~l~~~~f~sg~~~L~yE---v~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~~~~e~~i~l 90 (521)
T PRK03612 15 DRALLLAAVFVCAACGLVYE---LLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGFVAVELLLAL 90 (521)
T ss_pred hhHHHHHHHHHHHHHHHHHH---HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHH
Confidence 44444444444444444433 3344555666788888999999999999999999999987553 3332211 11111
Q ss_pred hccCCcccccCCCCCcccccc-chhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHH
Q 043156 103 EFLPPPCNVFDPTAGCKKIEG-SDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGG 181 (578)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~ 181 (578)
....+....+ ... ... .....++...++.++..|+..|....+..+....+ -++..|..|....+|+
T Consensus 91 ~~~~~~~ll~---~~~--~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~-------~g~~~g~ly~~ntlGa 158 (521)
T PRK03612 91 LGGLSALILY---AAF--AFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQH-------LGHNVATVLAADYLGA 158 (521)
T ss_pred HHHHHHHHHH---HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-------hhhhhhhhHhHHhHHH
Confidence 1100000000 000 000 11112223334456666666666555554432211 3566788888999999
Q ss_pred HHHHHHHHHhcc-ccCchhHHHHHHHHH-HHHHHHHH
Q 043156 182 AISVTLIVWIQD-NKGWDRGFGLSSVAV-FLATIIFA 216 (578)
Q Consensus 182 ~~~p~l~~~l~~-~~g~~~~f~i~~~~~-~~~~~~~~ 216 (578)
++|.++.+++.- ..|-....++.+.+. +++++.++
T Consensus 159 ~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~~ 195 (521)
T PRK03612 159 LVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFLW 195 (521)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 999999887754 567444444444443 33433333
No 265
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.89 E-value=0.03 Score=58.42 Aligned_cols=184 Identities=16% Similarity=0.110 Sum_probs=108.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhh-hhhhhhhhhc
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFK-AVLISGSVEF 104 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~-~~~~~~~~~~ 104 (578)
|...++++........|++..+.+-.-+ ..-|.+...+|.+.....+++.++..+.|.++||. ...| +.++......
T Consensus 266 ~~F~il~~~ygi~~g~F~~l~~~l~~~l-~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dkt-k~fk~~~~v~~~~~~ 343 (480)
T KOG2563|consen 266 RQFIILAICYGIGLGLFNSLSTLLNLAL-CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKT-KKFKLTTLVLYLFAL 343 (480)
T ss_pred ccHHHHHHHHhhhHHHHHHHHHHhhhcc-ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHHHHH
Confidence 4456666666666666666655443222 34577778899999999999999999999999998 5544 3433333333
Q ss_pred cCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCC-CCCChHHHhhhhhHHHHHHHHHHHHHHH
Q 043156 105 LPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQF-DEKDPIEARQMSSFFNLLFLAVCIGGAI 183 (578)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~-~~~~~~~~~~R~~~~~~~~~~~~lG~~~ 183 (578)
++.++. ..+... ....+.++.-..+.|.......|...-+..|.. |..| +...|+.+...++-+.+
T Consensus 344 v~~~~l-----~~~t~~-~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E-------~tSsGll~~~gq~f~~~ 410 (480)
T KOG2563|consen 344 VGTLML-----LTCTLF-LGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE-------GTSSGLLNLSGQIFGVI 410 (480)
T ss_pred HHHHHH-----HHhhcc-CCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC-------cccceeEEeehhHHHHH
Confidence 221111 001111 122333445555667766777888777777765 5554 66667766666666666
Q ss_pred HHHHHHHhccccC---chh-HHHHHHHHHHHHHHHHHhcCCCcee
Q 043156 184 SVTLIVWIQDNKG---WDR-GFGLSSVAVFLATIIFAAGLPLYRF 224 (578)
Q Consensus 184 ~p~l~~~l~~~~g---~~~-~f~i~~~~~~~~~~~~~~~~~~~~~ 224 (578)
=..+.+...+.++ |.. .-+......++.+++..+.++++++
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R 455 (480)
T KOG2563|consen 411 LVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRR 455 (480)
T ss_pred HHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHh
Confidence 6666677766555 333 2222333344455555555655543
No 266
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.82 E-value=0.16 Score=56.75 Aligned_cols=153 Identities=15% Similarity=0.191 Sum_probs=106.2
Q ss_pred CchhhHhHhHHHHHHHHHHHHHHHHH----HHhhhh-------h-c----CccCCCC--------CC----CCccchhhH
Q 043156 399 THLQRVGVGLVLSCISMAIAAIFEVI----RKDVAR-------D-H----NMLDAIP--------VV----QPLPISTFW 450 (578)
Q Consensus 399 ~~~~~~~iG~~~~~~~~~~~~~~~~~----~~~~~~-------~-~----~~~~~~~--------~~----~~~~~~~~~ 450 (578)
++++.+++|.++++++.++.++..-. .++... . + .+.+..+ +. ......+..
T Consensus 160 HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 239 (735)
T KOG3626|consen 160 HRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLL 239 (735)
T ss_pred CccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHH
Confidence 45578999999999999988775322 111100 0 0 0111000 01 112224456
Q ss_pred HHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccc-------cCccCCC-CCcC
Q 043156 451 LSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSAT-------RGITQSG-GWLA 522 (578)
Q Consensus 451 ~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~-------~~~~~~~-~~~~ 522 (578)
++++-++.|+|+.-.++...+|+-+-+-++.-..+.|+.+.++.+|-++|-++.++..+.- .++|..+ .|+
T Consensus 240 ff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWI- 318 (735)
T KOG3626|consen 240 FFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWI- 318 (735)
T ss_pred HHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchh-
Confidence 7778899999999999999999999999999999999999999999999998888775432 1111222 344
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccc
Q 043156 523 GNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYNY 558 (578)
Q Consensus 523 ~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~ 558 (578)
+.|+..|++.+++.++..+.++++=+++.+
T Consensus 319 ------GAWWlGFLi~g~~~~~~a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 319 ------GAWWLGFLICGALLLFSAVPLFFFPKELPK 348 (735)
T ss_pred ------hHHHHHHHHHHHHHHHHHHHHHhCcccCcc
Confidence 467778999999999988888888666554
No 267
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=95.61 E-value=0.12 Score=58.18 Aligned_cols=131 Identities=13% Similarity=0.157 Sum_probs=88.4
Q ss_pred hhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccCCch-
Q 043156 402 QRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKG- 480 (578)
Q Consensus 402 ~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~- 480 (578)
+.+.++.++..+|+.++++.... . ...............+.++|.+..-|...++..++.+++
T Consensus 55 ~tIl~~~ii~~lG~~llai~a~~-----~-----------~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~ 118 (654)
T TIGR00926 55 KTILYLSIVYVVGHALLSFGAIP-----S-----------SGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQ 118 (654)
T ss_pred HHHHHHHHHHHHHHHHHHhccCc-----c-----------cccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccc
Confidence 56777888888888777653200 0 000111223445667788888888899999999988754
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccc
Q 043156 481 --IKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYNY 558 (578)
Q Consensus 481 --~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~ 558 (578)
.|.....++..+.++|+++++.+.+.+.... ..+- ...+|...|.+.+++++++.++++...+++++
T Consensus 119 ~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~------~~fg-----~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~ 187 (654)
T TIGR00926 119 LSLRSRFFSFFYFAINAGSLISTIITPILRGDV------GCFG-----CQDCYPLAFGVPAILMILALIVFMAGSKMYKK 187 (654)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cccc-----cCcchHHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 3667788888889999999998888765210 0000 01246678999999999999888877766654
Q ss_pred c
Q 043156 559 R 559 (578)
Q Consensus 559 ~ 559 (578)
+
T Consensus 188 ~ 188 (654)
T TIGR00926 188 K 188 (654)
T ss_pred C
Confidence 4
No 268
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=94.85 E-value=1.2 Score=47.86 Aligned_cols=56 Identities=5% Similarity=-0.013 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHH-HhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 043156 453 IQFFIFGIADMF-TYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVN 508 (578)
Q Consensus 453 ~~~~l~g~g~~~-~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~ 508 (578)
..|+...+-... .+-..|.++.|....++..+.-++.....++|..+|+.+...+.
T Consensus 133 ~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 133 LFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444443333 33488999999999999999999999999999999998887765
No 269
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.61 E-value=0.26 Score=52.75 Aligned_cols=115 Identities=17% Similarity=0.264 Sum_probs=74.8
Q ss_pred hhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccchhhHHHHHHHHHHHHHHHHhhhhhheeeccC---C
Q 043156 402 QRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPISTFWLSIQFFIFGIADMFTYVGLLEFFYSEA---P 478 (578)
Q Consensus 402 ~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~---P 478 (578)
.-+.+|.++..++.+.++.... ...+.......+++..+|..+.....-+...|.+ |
T Consensus 60 ~Y~~i~~~~~~~~~~~~~~~~~--------------------~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p 119 (433)
T PF03092_consen 60 PYMIIGWLLGAVSALVLALLPA--------------------SESSAAIAVVLLFLASFGYAFADVAADALVVELARREP 119 (433)
T ss_pred HHHHHHHHHHHHHHHHHHhccc--------------------ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCC
Confidence 4556666666555555555331 1123333444556677777777777766666654 5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhccc
Q 043156 479 KGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSR 555 (578)
Q Consensus 479 ~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~ 555 (578)
++ ||..++..+..+.+|+.++.++.|.+.... +++..|.+.+++.++..+..+++..+
T Consensus 120 ~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~------------------~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 120 ES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSF------------------GPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred ch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcC------------------CCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 55 888999999999999999999988776311 22345777777777776666666665
No 270
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.38 E-value=0.58 Score=42.28 Aligned_cols=62 Identities=10% Similarity=0.225 Sum_probs=54.7
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 043156 447 STFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVN 508 (578)
Q Consensus 447 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~ 508 (578)
+.+.+++.-++.|++......+.-.+..+...++.+++..++++.....+.++|..+.-.+.
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888899999999999999999999999999999999999999999999987766554
No 271
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=93.79 E-value=0.41 Score=50.89 Aligned_cols=133 Identities=13% Similarity=-0.008 Sum_probs=100.6
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccc----
Q 043156 47 VNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIE---- 122 (578)
Q Consensus 47 ~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 122 (578)
..+..|+..+ |++....|..-+.-.+.+..+.....++.+|+ |..|+=++++........+.+ ..++...
T Consensus 279 ~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v----~~~~~~~~~~~ 352 (432)
T PF06963_consen 279 GLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCV----VSFWAPGSPFS 352 (432)
T ss_pred HHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHH----HHHhcCCCCch
Confidence 4466788766 99999999999999999999999999999998 999988888776552222210 0011111
Q ss_pred cchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 043156 123 GSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWI 191 (578)
Q Consensus 123 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l 191 (578)
..+...++.+..+.=+|.-++.-+..-++.|..|+++ |+...|..+...++.-.+...++-.+
T Consensus 353 ~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~------Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 353 SISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE------RGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH------hhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2345566667777677777888888999999999887 99999999999999888886555433
No 272
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=93.18 E-value=2.9 Score=45.29 Aligned_cols=157 Identities=12% Similarity=0.041 Sum_probs=90.8
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCHHHHHHHHHHHHH-HHHHHHhHHHHHhhhccchhhhhh
Q 043156 22 HGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVL---HLDLAEAANQVTNYMG-TSYILSIVVALLADAFIGRFKAVL 97 (578)
Q Consensus 22 ~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~l---g~s~~~~~~~~~~~~~-~~~~~~~~~G~laD~~~Grr~~~~ 97 (578)
+..+++++.+.+..++..+.|..+.. +++.+ ..+++.+..+-..... +..+...+-.+++|++ +|.+++-
T Consensus 20 ~~E~~k~~~l~~m~f~i~f~y~~lR~-----~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~lFy 93 (491)
T PF03219_consen 20 RSELKKFLPLALMFFFILFNYTILRD-----LKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRL-SREKLFY 93 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHH
Confidence 45567788788777777666554432 22222 1245555555554433 5666677789999998 9999887
Q ss_pred hhhhhhc-----cCCcccccCCCCCccccc----------cc---------hhHHHHHHHHHHHHhcccccc-ccccccc
Q 043156 98 ISGSVEF-----LPPPCNVFDPTAGCKKIE----------GS---------DAALLFVALYLIATGTAGIKA-ALPPYGA 152 (578)
Q Consensus 98 ~~~~~~~-----~~~~~~~~~~~~~~~~~~----------~~---------~~~~~~~~~~l~g~g~g~~~~-~~~~~v~ 152 (578)
+....+. ++.++. |..-..... .. +.|...+..+...+-.....+ .-..+..
T Consensus 94 ~~~~~F~~fF~~f~~vly---P~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN 170 (491)
T PF03219_consen 94 IIIIPFLGFFALFAFVLY---PNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFAN 170 (491)
T ss_pred HHHHHHHHHHHHHHHHHh---hchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655544 222221 100000000 00 111111111111111111122 2367788
Q ss_pred cCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcc
Q 043156 153 DQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQD 193 (578)
Q Consensus 153 ~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~ 193 (578)
|.++.+| -.|.++++..+.|+|.++++.+..++.+
T Consensus 171 ~itt~~e------AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 171 EITTVEE------AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred hcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999887 6899999999999999999999888876
No 273
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=92.98 E-value=3.7 Score=42.16 Aligned_cols=142 Identities=12% Similarity=0.005 Sum_probs=76.9
Q ss_pred CcccCchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCC
Q 043156 363 ASLPILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQ 442 (578)
Q Consensus 363 ~~~~~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (578)
+.+.........+++++.+.+.|+++||+ ..+ +.++...+..+..
T Consensus 72 a~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~-----------~cl----~~cily~~scl~k-------------------- 116 (354)
T PF05631_consen 72 AILFVAGFASSAIFGTFVGSLADRYGRKK-----------ACL----LFCILYSLSCLTK-------------------- 116 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchH-----------HHH----HHHHHHHHHHHHH--------------------
Confidence 34555667788999999999999999883 112 2222222222211
Q ss_pred CccchhhHHHHHHHHHHHHHHHHhhhhhheeec-----cCCchhhHHHHHHHH-HHHHHHHHHHHHHHHhhhccccCccC
Q 043156 443 PLPISTFWLSIQFFIFGIADMFTYVGLLEFFYS-----EAPKGIKSLSTCFLW-CSMALGYFFSTILVNIVNSATRGITQ 516 (578)
Q Consensus 443 ~~~~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~-----~~P~~~rg~~~g~~~-~~~~ig~~lg~~~~~~~~~~~~~~~~ 516 (578)
...+...+++.=++.|++..+.....-++... -.|++..+.-.+... ..+.+-.+++.++...+.+.. +
T Consensus 117 -~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~----~ 191 (354)
T PF05631_consen 117 -HSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWF----G 191 (354)
T ss_pred -hccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHh----C
Confidence 12255667777888899888877765554432 455555444443333 223333444444444433211 0
Q ss_pred CCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccc
Q 043156 517 SGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRY 556 (578)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~ 556 (578)
.++- ..|.....+.+++.++.....++.
T Consensus 192 ~g~v------------aPF~~a~~~l~~~~~~I~~~W~EN 219 (354)
T PF05631_consen 192 FGPV------------APFDAAIVLLAVAAVLILKTWPEN 219 (354)
T ss_pred CCCc------------chHHHHHHHHHHHHHHHHhccccc
Confidence 0111 237777777777666554444443
No 274
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=92.69 E-value=0.55 Score=47.65 Aligned_cols=129 Identities=16% Similarity=0.137 Sum_probs=67.6
Q ss_pred HHHHHHHH-HhcCCCHHHHH-HHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhccCCcccccCCCCCccccccc
Q 043156 47 VNLVTYFN-GVLHLDLAEAA-NQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGS 124 (578)
Q Consensus 47 ~~l~~yl~-~~lg~s~~~~~-~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (578)
+++..|+. .+.+++..+.. -+.=..+-.+.+..++.=.+.|.. |+|-+++--.+..+....+ ...+.
T Consensus 25 P~~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~l--rYKPvivlq~ls~v~~w~~---------lv~g~ 93 (433)
T KOG3810|consen 25 PYLTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYL--RYKPVVVLQALSGVPVWIM---------LVFGP 93 (433)
T ss_pred CccchhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhh--hcceeeeeeccchhHHHHH---------HHhcC
Confidence 45667766 55677776654 222333444555555666788975 6554443221111111110 01122
Q ss_pred hhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcc
Q 043156 125 DAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQD 193 (578)
Q Consensus 125 ~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~ 193 (578)
+....=+.-+..|...+ ...+.++++=+..++++ +.+..+....+.-.|...|..++-.+..
T Consensus 94 sV~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd~~~------Yqrvt~y~RaA~L~g~~~g~vlaQlLvs 155 (433)
T KOG3810|consen 94 SVKAMQVLEFFYGPATA-AEIAYYSYIYSKVDPEM------YKRVTGYCRAAFLVGKFVGSVLAQLLVS 155 (433)
T ss_pred CchheeeehhhcChHHH-HHHhhhheeeeecCHHH------HHHHHHHhHHHHHHHhHHHhHHHHHHhh
Confidence 32222222222222211 12344555555555554 8888899999999999888877776654
No 275
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=92.19 E-value=17 Score=38.10 Aligned_cols=59 Identities=10% Similarity=0.175 Sum_probs=50.1
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 043156 446 ISTFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILV 504 (578)
Q Consensus 446 ~~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~ 504 (578)
-+-+|.++...++|+..+-.......++-+.+|++++-.+..+..+.-..|-+.|..+.
T Consensus 341 ~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 341 ESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred cCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 35577888889999999988888889999999999999999998888888888777653
No 276
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=91.04 E-value=1.7 Score=42.33 Aligned_cols=108 Identities=13% Similarity=0.094 Sum_probs=71.6
Q ss_pred chhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccch
Q 043156 368 LPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPIS 447 (578)
Q Consensus 368 ~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (578)
...+...+..++.+.+.|+.++| +.+..+.....++.+...+.. ...
T Consensus 47 ~~~~~~~~~~~~~g~l~d~~g~~-----------~~~~~~~~~~~~~~~~~~~~~----------------------~~~ 93 (338)
T COG0477 47 AFFLGYAIGSLLAGPLGDRYGRR-----------KVLIIGLLLFLLGTLLLALAP----------------------NVG 93 (338)
T ss_pred HHHHHHHHHhhhhhhccccccch-----------HHHHHHHHHHHHHHHHHHhCc----------------------cch
Confidence 33455555557788887777444 344445544344433333322 023
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhheeeccCCc-hhhHHHHHHHHH-HHHHHHHHHHHHHHhhh
Q 043156 448 TFWLSIQFFIFGIADMFTYVGLLEFFYSEAPK-GIKSLSTCFLWC-SMALGYFFSTILVNIVN 508 (578)
Q Consensus 448 ~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~-~~rg~~~g~~~~-~~~ig~~lg~~~~~~~~ 508 (578)
.+.++......+++.+...+....+..+..|+ +.|+...+.... ...++..+++.+.+.+.
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLL 156 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555668888888999999999999998 778988888888 57788888886666554
No 277
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=86.91 E-value=0.93 Score=47.51 Aligned_cols=64 Identities=8% Similarity=-0.027 Sum_probs=53.9
Q ss_pred cchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhc
Q 043156 123 GSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQ 192 (578)
Q Consensus 123 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~ 192 (578)
-++.+..++..+..|+..|..+.+....+.|..|+++ |..+++....+-++|..++.+++-++.
T Consensus 332 ipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~------REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 332 IPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPED------REFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3567777777778899999999999999999888776 999999999999999999987776653
No 278
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=86.31 E-value=47 Score=35.06 Aligned_cols=61 Identities=21% Similarity=0.353 Sum_probs=47.5
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 043156 447 STFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVN 508 (578)
Q Consensus 447 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~ 508 (578)
+.+++-+.-+++|++... ..+.++++++.+|+++--++.+....+.-+|.+++..+...+.
T Consensus 93 sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllv 153 (412)
T PF01770_consen 93 SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLV 153 (412)
T ss_pred cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666776777778877654 7788899999999999888888877777777777777766554
No 279
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=86.03 E-value=55 Score=35.41 Aligned_cols=60 Identities=15% Similarity=0.173 Sum_probs=51.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043156 448 TFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIV 507 (578)
Q Consensus 448 ~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~ 507 (578)
+..++..+++..+.......+..++-.+++.+.+-|++|.+.|...|+|+.--..++-.+
T Consensus 405 f~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~l 464 (544)
T PF13000_consen 405 FLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWL 464 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHH
Confidence 355667788888888888999999999999999999999999999999988766655444
No 280
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=85.74 E-value=7.3 Score=39.45 Aligned_cols=118 Identities=18% Similarity=-0.004 Sum_probs=71.3
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhh
Q 043156 22 HGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGS 101 (578)
Q Consensus 22 ~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~ 101 (578)
+..-|.++++-.........|-+ ..++......++|..+ .+.+ ...-....++.+.+..++ |-|.++.++..
T Consensus 25 ~~~~knv~i~s~~fl~~f~a~~g-l~nlq~~vn~~lg~~s--l~~~----y~~l~~s~m~~~~~Ir~~-g~K~tm~lav~ 96 (390)
T KOG3097|consen 25 LGILKNVLILSIAFLLTFTAYLG-LQNLQTSVNYDLGTVS--LGAL----YLSLIDSSMFMPLLIRFL-GTKWTMVLAVF 96 (390)
T ss_pred cchhhhhhHHHHHHHHHHHHHHH-HHHHHHHHhcCcccch--hhhh----hHHHHHHHHHHHHHHHHH-hhHHHHHHHHH
Confidence 34456777766555554444443 3455555544444222 2222 222233344444777776 99999999888
Q ss_pred hhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCC
Q 043156 102 VEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEK 158 (578)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~ 158 (578)
.+..-... ..-+.+..++.+-+..|+|.+..+.+--+++++.-...
T Consensus 97 ~Y~lyiA~-----------Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~y 142 (390)
T KOG3097|consen 97 PYALYIAA-----------NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNY 142 (390)
T ss_pred HHHHHHHh-----------hcchhHHhhccHHHhhccccccccccCcceecHHHHHH
Confidence 77721111 22356667777778889999999999888888765543
No 281
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=84.92 E-value=1.5 Score=46.87 Aligned_cols=154 Identities=10% Similarity=-0.014 Sum_probs=81.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHH-HHHHHHHHHHHHHHHHHhHHHHHhhhccchh-hhhhhhhhh
Q 043156 26 KTSLLILAAFGFENLATIALGVNLVTYFNGVL-HLDLA-EAANQVTNYMGTSYILSIVVALLADAFIGRF-KAVLISGSV 102 (578)
Q Consensus 26 r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~l-g~s~~-~~~~~~~~~~~~~~~~~~~~G~laD~~~Grr-~~~~~~~~~ 102 (578)
|++|...+..++..+....+.+-.....+.+- +.+.. -.-.+...|.++-.++..+..+.- .- ++| +.+.+..+.
T Consensus 269 kki~~~~~~vf~~F~vTL~vFPgv~~~i~~~~~~~~~~~~~~i~~~~fNvgD~vGR~~~~~~~-~p-~~~~~~l~i~s~~ 346 (437)
T TIGR00939 269 TKVWLLAFSVVFVFTVTLSVFPAITTAVTSSGLGLSNWFYPIICFLLFNLFDWLGRSLTSKFM-WP-DEDSRWLPILSFL 346 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCCccHHHHHHHHHHHHHHHHHhhhhheeE-ee-CCCccchHHHHHH
Confidence 66666666655554444444443332222221 23332 334555666777777776554321 11 222 123232222
Q ss_pred hc--cCCccc-ccCCCCCccccccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHH
Q 043156 103 EF--LPPPCN-VFDPTAGCKKIEGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCI 179 (578)
Q Consensus 103 ~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~l 179 (578)
-. ++.+++ .+.+-.-. ...-.+.+..++..++.|+..|...+....+..+..+++| |..+-.+...+.++
T Consensus 347 R~iFIPlf~lcn~~~~~~~-p~~~~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e------~e~aG~~~~~~l~~ 419 (437)
T TIGR00939 347 RVLFIPLFLLCNYPQRSRL-PVFFPGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHE------REVAGALMVIFLLV 419 (437)
T ss_pred HHHHHHHHHHhcCCccccC-CeeecccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHH------HHHHHHHHHHHHHH
Confidence 22 222211 00000000 0012345556677888999999888888888888877655 78887788888888
Q ss_pred HHHHHHHHH
Q 043156 180 GGAISVTLI 188 (578)
Q Consensus 180 G~~~~p~l~ 188 (578)
|-..|..++
T Consensus 420 Gl~~Gs~l~ 428 (437)
T TIGR00939 420 GLALGAVLS 428 (437)
T ss_pred HHHHHHHHH
Confidence 888776543
No 282
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=84.84 E-value=15 Score=35.95 Aligned_cols=56 Identities=13% Similarity=0.188 Sum_probs=39.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhcc-------ccCchhHHHHHHHHHHHHHHHHHhcCCCc
Q 043156 165 QMSSFFNLLFLAVCIGGAISVTLIVWIQD-------NKGWDRGFGLSSVAVFLATIIFAAGLPLY 222 (578)
Q Consensus 165 ~R~~~~~~~~~~~~lG~~~~p~l~~~l~~-------~~g~~~~f~i~~~~~~~~~~~~~~~~~~~ 222 (578)
+|+....+..++.|+|++++-.. ++.. .-.|++++.+.+++.++-++++.++.++.
T Consensus 3 ~K~~~s~~n~~gf~iG~ii~~ip--F~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~f 65 (267)
T PF07672_consen 3 KKSILSQFNPWGFNIGTIIVNIP--FLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNF 65 (267)
T ss_pred ccceeeeeccccchhhHHHHHhh--HHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 47777777888889999887432 3221 12499999998888877777777766554
No 283
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.18 E-value=10 Score=40.68 Aligned_cols=106 Identities=16% Similarity=0.127 Sum_probs=66.8
Q ss_pred HHHHHHHHhHHHHHh---hhccchhhhhhhhhhhhccCCccccc-CC-------CCCccccccchhHHHHHHHHHHHHhc
Q 043156 72 MGTSYILSIVVALLA---DAFIGRFKAVLISGSVEFLPPPCNVF-DP-------TAGCKKIEGSDAALLFVALYLIATGT 140 (578)
Q Consensus 72 ~~~~~~~~~~~G~la---D~~~Grr~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~l~g~g~ 140 (578)
..+..++.++.+.++ +++ ||++++.++.++...+.++... .| +........++.....+.-++.|++.
T Consensus 289 g~g~v~~g~~~~~l~~rir~f-g~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D 367 (461)
T KOG3098|consen 289 GLGEVIGGLDFSILSKRIRGF-GRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGD 367 (461)
T ss_pred hHHHHHHHHHHHHHhhhhhhc-ccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHH
Confidence 444555555555555 555 8899888887776644322211 00 00001112334556666778889999
Q ss_pred cccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHH
Q 043156 141 AGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISV 185 (578)
Q Consensus 141 g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p 185 (578)
+...+..+.++++.+|.+ |..+++++..-..++..++-
T Consensus 368 ~~~~t~~~~ii~~~~~~~-------~~~~fsi~kfyq~~~s~v~~ 405 (461)
T KOG3098|consen 368 ACFNTQRYVIIALLYPDD-------RAQAFSLFKFYQSVASCVAF 405 (461)
T ss_pred HHHHHHHHHHHHHHhcCc-------hHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999543 78888887666666665543
No 284
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=82.12 E-value=74 Score=34.30 Aligned_cols=161 Identities=12% Similarity=0.024 Sum_probs=93.3
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CHHHHHHHHHHHHH-HHHHHHhHHHHHhhhccchhhhhh
Q 043156 22 HGGIKTSLLILAAFGFENLATIALGVNLVTYFNGVLHL---DLAEAANQVTNYMG-TSYILSIVVALLADAFIGRFKAVL 97 (578)
Q Consensus 22 ~~~~r~~~~l~~~~~~~~~~~~~~~~~l~~yl~~~lg~---s~~~~~~~~~~~~~-~~~~~~~~~G~laD~~~Grr~~~~ 97 (578)
|..++++..+.+..++..+.|..+.. +.+.+.+ +++.+.++-...-. ++.+..++-+++.++. -|.+++.
T Consensus 23 r~E~~kflpl~Ll~f~I~~ny~~lR~-----lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~ 96 (509)
T COG3202 23 RYELKKFLPLALLFFCILFNYNLLRS-----LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFY 96 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHH
Confidence 34567777777777777666665443 3444443 34555666666655 6788888899999997 9999887
Q ss_pred hhhhhhc-----cCCcccccC----C-----------CCCc--cccccchhHHHHHHHHHHHHhcccccc-ccccccccC
Q 043156 98 ISGSVEF-----LPPPCNVFD----P-----------TAGC--KKIEGSDAALLFVALYLIATGTAGIKA-ALPPYGADQ 154 (578)
Q Consensus 98 ~~~~~~~-----~~~~~~~~~----~-----------~~~~--~~~~~~~~~~~~~~~~l~g~g~g~~~~-~~~~~v~~~ 154 (578)
+-+..+. +|.++..+- | .+.. +.-.--+.|...+..+...+=...... .-.....|+
T Consensus 97 ~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNei 176 (509)
T COG3202 97 IILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEI 176 (509)
T ss_pred HHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6655554 222221100 0 0000 000000111111111111111111111 234567888
Q ss_pred CCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhccc
Q 043156 155 FDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQDN 194 (578)
Q Consensus 155 ~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~~ 194 (578)
+..+| -.|.++.++.+.|++..++..+..++.++
T Consensus 177 tt~~e------akRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 177 TTIEE------AKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred hhHHH------hhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 88776 68999999999999999999999988763
No 285
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=81.79 E-value=78 Score=33.87 Aligned_cols=59 Identities=8% Similarity=0.158 Sum_probs=51.0
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 043156 447 STFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVN 505 (578)
Q Consensus 447 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~ 505 (578)
+-++.++..++.|+..+........+..+.+++++|..+..+..++-.+|-.+|+.+.-
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566666899999999999888899999999999999999999999999999887643
No 286
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=75.84 E-value=15 Score=40.63 Aligned_cols=154 Identities=14% Similarity=0.155 Sum_probs=97.5
Q ss_pred hhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCC-CCCCCccchhhHHHHHHHH
Q 043156 379 VYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAI-PVVQPLPISTFWLSIQFFI 457 (578)
Q Consensus 379 l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~l 457 (578)
+.+.+.|.+.-|+ +.+.++.++..+++.++..........+..+.+-.+. .|..+.......+...+-+
T Consensus 92 ~g~~laD~f~gry----------~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~l 161 (571)
T KOG1237|consen 92 LGAFLADSFLGRY----------FTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYL 161 (571)
T ss_pred HHHHHHHHHhHHH----------HHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHH
Confidence 3444555555554 5678888888888777766554432222111000000 0222333344455556666
Q ss_pred HHHHHHHHhhhhhheeeccCC----chhhH--HHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchh
Q 043156 458 FGIADMFTYVGLLEFFYSEAP----KGIKS--LSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHL 531 (578)
Q Consensus 458 ~g~g~~~~~~~~~~~~~~~~P----~~~rg--~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (578)
.++|.+..-|...++-.++.+ +..+. ..+..+.+..++|..++..+...+. ++.+|
T Consensus 162 ia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq-------~~~~w----------- 223 (571)
T KOG1237|consen 162 IALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQ-------DNVGW----------- 223 (571)
T ss_pred heeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhh-------hcccc-----------
Confidence 677888889999999999988 22233 6677888888888888887766553 12234
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccccccc
Q 043156 532 NLFFWLLSALSFINFSVYLFMSSRYNYRP 560 (578)
Q Consensus 532 ~~~f~~~~~~~~i~~i~~~~~~~~~~~~~ 560 (578)
...|.+.++..++++++++.-.+.++.+.
T Consensus 224 ~lgf~i~~~~~~lai~iF~~g~~~y~~~~ 252 (571)
T KOG1237|consen 224 KLGFGIPTVLNALAILIFLPGFPFYRYKK 252 (571)
T ss_pred eeeccHHHHHHHHHHHHHHcCceeEEeeC
Confidence 45688889999999999888877776554
No 287
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=72.07 E-value=97 Score=31.48 Aligned_cols=73 Identities=7% Similarity=0.007 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHhHHHHHhhhc-cchhhhhhhhhhhhccCCcccccCCCCCccccccchhHHHHHHHHHHHHhcccc
Q 043156 65 ANQVTNYMGTSYILSIVVALLADAF-IGRFKAVLISGSVEFLPPPCNVFDPTAGCKKIEGSDAALLFVALYLIATGTAGI 143 (578)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~G~laD~~-~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~ 143 (578)
|.++..-.+-..+.-+....+-||+ .|.|..+ ..++.+.+.++. +.+.+.++-+.+..+..++.|.-
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~--~v~~sa~s~~lV----------afs~s~~~sL~GV~~aSissGlG 132 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIAL--VVLLSALSFFLV----------AFSNSVPMSLLGVVFASISSGLG 132 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHH--HHHHHhcceEEE----------EeccchhHHHhhhhhhhhcCCcc
Confidence 4444444444555556666677776 2444333 333444443332 66777888888888888888765
Q ss_pred cccccc
Q 043156 144 KAALPP 149 (578)
Q Consensus 144 ~~~~~~ 149 (578)
...--+
T Consensus 133 EiTFL~ 138 (409)
T KOG3880|consen 133 EITFLA 138 (409)
T ss_pred eeehhh
Confidence 544333
No 288
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=69.55 E-value=1.5e+02 Score=32.33 Aligned_cols=45 Identities=13% Similarity=0.022 Sum_probs=39.8
Q ss_pred HhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 043156 465 TYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNS 509 (578)
Q Consensus 465 ~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~ 509 (578)
.+-..|.++.+..+.++..+.-++.....++|..++..+...+.+
T Consensus 161 lSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 161 LSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344579999999999999999999999999999999988887764
No 289
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=67.28 E-value=8.7 Score=37.81 Aligned_cols=133 Identities=14% Similarity=0.103 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHhhhccchhh---hhhhhhhhhccCC--cccccCCCCCccccccchhHHHHHHHHHHHH
Q 043156 64 AANQVTNYMGTSYILSIVVALLADAFIGRFK---AVLISGSVEFLPP--PCNVFDPTAGCKKIEGSDAALLFVALYLIAT 138 (578)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~G~laD~~~Grr~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 138 (578)
-|.+.+.|..+..+++-+..++..|- |.| .+.+..++..... .++. .... ....++..-+++..+.-.
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s--~~~ve~ymqivf~vs~a~l~Lpilt---~~vs--P~kes~~~s~i~F~~~E~ 356 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRS--SPKVESYMQIVFLVSIAALLLPILT---SSVS--PSKESPSESLIGFCLFEA 356 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcC--CcccchHHHHHHHHHHHHHHHHHHH---hccC--CCcCCchHHHHHHHHHHH
Confidence 48888888888888887777776663 322 2222222222111 0110 1101 111334444667777888
Q ss_pred hccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcc----ccCchhHHHHHHHHHHHHHH
Q 043156 139 GTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLIVWIQD----NKGWDRGFGLSSVAVFLATI 213 (578)
Q Consensus 139 g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~~~l~~----~~g~~~~f~i~~~~~~~~~~ 213 (578)
+.|.++|++..+=.+..|+++ |+..+.++..-.|+-.-++ -+-.+ ..+-|..|.++.+...++.+
T Consensus 357 cvGlfwPSimkmRsqyIPEea------rstimNfFRvPLnifvClv----Lynlh~~~~p~~tr~mf~icS~~~~~a~i 425 (454)
T KOG4332|consen 357 CVGLFWPSIMKMRSQYIPEEA------RSTIMNFFRVPLNIFVCLV----LYNLHVDAFPTTTRNMFGICSAFLFVASI 425 (454)
T ss_pred HHhhcchHHHHHHHhhCCHHH------HhhhhhheechhhHhhhhh----heecccccCccccchhhhhhHHHHHHHHH
Confidence 999999999998888888776 9999999988888765433 22211 13456788888777666544
No 290
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=64.54 E-value=1.2e+02 Score=32.94 Aligned_cols=41 Identities=10% Similarity=0.106 Sum_probs=28.5
Q ss_pred hhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043156 467 VGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIV 507 (578)
Q Consensus 467 ~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~ 507 (578)
++.-.++.++..++.+|-+..-.....++|.+++..+.-.+
T Consensus 137 IAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 137 IAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLAL 177 (544)
T ss_pred ceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhh
Confidence 44444555666778888888888888888888877655444
No 291
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=61.51 E-value=2 Score=43.65 Aligned_cols=108 Identities=10% Similarity=0.034 Sum_probs=3.5
Q ss_pred HHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhc--cCCcccccCCCCCcccc--------ccchhHHHHHHHHHH
Q 043156 67 QVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEF--LPPPCNVFDPTAGCKKI--------EGSDAALLFVALYLI 136 (578)
Q Consensus 67 ~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~ 136 (578)
....|.++-.++..+.++.-=+- -++|.+.+..+.-. ++.+++ |... .-.+.+..++..+++
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~-~~~~~l~~~s~~R~~fiPlf~~-------cn~~p~~~~~~~~~~~d~~~~i~~~l~ 258 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPG-PSPRWLWILSLLRFLFIPLFLL-------CNVQPRPRYLPVLFNSDAWFIILMLLF 258 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecc-cccccHHHHHHHHHHHHHHHHH-------HHhhcccccCCCcccchHHHHHHHHHH
Confidence 44567777888887777642110 12333333333332 333332 2111 123445566777888
Q ss_pred HHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 043156 137 ATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAISVTLI 188 (578)
Q Consensus 137 g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~p~l~ 188 (578)
|+..|-..+....+..+..++++ |..+-.+..+..++|-.+|..++
T Consensus 259 g~TNGyl~tl~m~~~p~~v~~~e------~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 259 GFTNGYLSTLAMMYAPKSVSPEE------RELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp --------HHHH----------------------------------------
T ss_pred HHccchhhhceeeeCCCcCCHHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888888888888766 77776677777777777775443
No 292
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=61.04 E-value=20 Score=37.34 Aligned_cols=94 Identities=12% Similarity=0.271 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhc------cccCccCCCCCcCCCCCC
Q 043156 454 QFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNS------ATRGITQSGGWLAGNNIN 527 (578)
Q Consensus 454 ~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 527 (578)
.+++.-+....-.++.-.++..+..++.-|-+........++|.++|..+.-.+.. .+.++ ..+
T Consensus 139 ~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~----------P~~ 208 (510)
T KOG3574|consen 139 LFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSI----------PLD 208 (510)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcC----------cCc
Confidence 34444454444455666666667777777777777777777777776644322211 01110 111
Q ss_pred cc--hhHHHHHHHHHHHHHHHHHHhhhccccc
Q 043156 528 RN--HLNLFFWLLSALSFINFSVYLFMSSRYN 557 (578)
Q Consensus 528 ~~--~~~~~f~~~~~~~~i~~i~~~~~~~~~~ 557 (578)
++ ....++++.+.+.+++-....++.++..
T Consensus 209 ~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~ 240 (510)
T KOG3574|consen 209 QGFITLAGYLWFWGALFIVATTLVALLKKEND 240 (510)
T ss_pred cceEEhhHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 11 2334577778888887777777755543
No 293
>PF12832 MFS_1_like: MFS_1 like family
Probab=56.92 E-value=11 Score=29.55 Aligned_cols=29 Identities=21% Similarity=0.282 Sum_probs=25.4
Q ss_pred CCcccCchhHHHHHHHHhhhhhhcccccc
Q 043156 362 PASLPILPILFMILAVPVYDRIFVPFAGK 390 (578)
Q Consensus 362 ~~~~~~~~~i~~il~~~l~~~l~~~l~~r 390 (578)
.+.+..+.++.-++..|+++.+.||..++
T Consensus 37 iGil~~i~~~~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 37 IGILSAIRPLIRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 45677888899999999999999998887
No 294
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=53.50 E-value=21 Score=34.94 Aligned_cols=64 Identities=13% Similarity=0.059 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhHHHHH---------hhhccchhhhhh
Q 043156 32 LAAFGFENLATIALGVNLVTYFNGVLHLDLAEAANQVTNYMGTSYILSIVVALL---------ADAFIGRFKAVL 97 (578)
Q Consensus 32 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~l---------aD~~~Grr~~~~ 97 (578)
-...+.+-.+.-...+++..|+++ .|.++.....++.+-...-.+..++.|.+ -||+ |||+..-
T Consensus 23 GvGHmlNDitAScWFTYlllfltq-iglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~-G~~~~wh 95 (412)
T KOG4830|consen 23 GVGHMLNDITASCWFTYLLLFLTQ-IGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI-GRRMSWH 95 (412)
T ss_pred chhHHHhhHHHHHHHHHHHHHHHH-hcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-cceeeee
Confidence 345666767767777888889864 57777777788888888899999988755 5787 9988654
No 295
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=52.19 E-value=1.3e+02 Score=32.55 Aligned_cols=86 Identities=8% Similarity=0.094 Sum_probs=56.1
Q ss_pred HHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHH
Q 043156 464 FTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSF 543 (578)
Q Consensus 464 ~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 543 (578)
..+-..|.++.++...++..+..++.++..+++..++..+...+.+.. ..+.. + ..+-..+..+.+.++..+
T Consensus 164 V~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~------~~~~~-~-~~~~~~~~~~~vi~~~~~ 235 (509)
T COG3202 164 VLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHR------DALAS-E-FKDLLLQILFIVIVILGI 235 (509)
T ss_pred HHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhch------hhHhH-H-HHHHHHHHHHHHHHHHHH
Confidence 334466788889999999999999999999999999998887776411 11111 0 111124445555555556
Q ss_pred HHHHHHhhhccccc
Q 043156 544 INFSVYLFMSSRYN 557 (578)
Q Consensus 544 i~~i~~~~~~~~~~ 557 (578)
+++..+..+.|..-
T Consensus 236 i~~~l~~~~~r~il 249 (509)
T COG3202 236 IAILLYRYINRNVL 249 (509)
T ss_pred HHHHHHHHHHhhcc
Confidence 66666666555443
No 296
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=51.88 E-value=13 Score=39.05 Aligned_cols=125 Identities=15% Similarity=0.022 Sum_probs=70.7
Q ss_pred HHHHHHHHhcC---CCHHHHHHHHHH-HHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhc-cCCccc-ccCCCCCcccc
Q 043156 48 NLVTYFNGVLH---LDLAEAANQVTN-YMGTSYILSIVVALLADAFIGRFKAVLISGSVEF-LPPPCN-VFDPTAGCKKI 121 (578)
Q Consensus 48 ~l~~yl~~~lg---~s~~~~~~~~~~-~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~ 121 (578)
..|-+..+..+ .+..-....... |.+.-.++.+...++-++ +||+..+..+.=.. ++.+.+ - +.. ...
T Consensus 265 iFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i~v~lR~lfiPlF~~cn---~~~-~~v 338 (406)
T KOG1479|consen 265 IFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTIPVLLRLLFIPLFLLCN---YPP-LPV 338 (406)
T ss_pred ecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCC--CCceehHHHHHHHHHHHHHHHhc---cCC-CCc
Confidence 45555554332 233444555555 788888887777777664 55555444332222 332221 0 000 011
Q ss_pred ccchhHHHHHHHHHHHHhccccccccccccccCCCCCChHHHhhhhhHHHHHHHHHHHHHHHH
Q 043156 122 EGSDAALLFVALYLIATGTAGIKAALPPYGADQFDEKDPIEARQMSSFFNLLFLAVCIGGAIS 184 (578)
Q Consensus 122 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~v~~~~~~~~~~~~~~R~~~~~~~~~~~~lG~~~~ 184 (578)
.-.+.+..+..-.++|+..|-.......+..+..|+++ +..+-.+.......|-..|
T Consensus 339 ~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e------~e~aG~~m~~fl~~Gl~~G 395 (406)
T KOG1479|consen 339 VFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSE------KEAAGNLMVFFLVGGLALG 395 (406)
T ss_pred eecCchHHHHHHHHHHhccchHhhheehhcCCCCChHH------HHHHHHHHHHHHHHHHHHh
Confidence 22445566777788899999988888999999888876 4444334444445554444
No 297
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=47.19 E-value=6.7 Score=39.78 Aligned_cols=58 Identities=16% Similarity=0.358 Sum_probs=3.6
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 043156 447 STFWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILV 504 (578)
Q Consensus 447 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~ 504 (578)
+-++.++..+++|+..|........+..+.++++.|..+..+..++-.+|-.+|..+.
T Consensus 247 ~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 247 SDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp --------------------HHHH----------------------------------
T ss_pred chHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666778899999999999999999999999999999999988888888887664
No 298
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=37.45 E-value=1.8e+02 Score=28.57 Aligned_cols=30 Identities=7% Similarity=-0.181 Sum_probs=21.5
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043156 478 PKGIKSLSTCFLWCSMALGYFFSTILVNIV 507 (578)
Q Consensus 478 P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~ 507 (578)
-+-+|..++|+-.+.++..+.+....++-+
T Consensus 73 vpii~~iGLglg~liW~s~n~l~Gw~~grf 102 (254)
T PF07857_consen 73 VPIIKTIGLGLGMLIWGSVNCLTGWASGRF 102 (254)
T ss_pred hhHhhhhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 356777788887777777777777766643
No 299
>PRK03612 spermidine synthase; Provisional
Probab=36.32 E-value=3.4e+02 Score=29.81 Aligned_cols=51 Identities=8% Similarity=0.036 Sum_probs=31.7
Q ss_pred HHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 043156 457 IFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFSTILVNIVN 508 (578)
Q Consensus 457 l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg~~~~~~~~ 508 (578)
+.++-.+...|....+..+.. .+.-|...|-......+|+.+|+++.+++.
T Consensus 119 ~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 119 LIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence 344555555555444333221 222456677888888899999998888765
No 300
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=34.74 E-value=74 Score=24.81 Aligned_cols=42 Identities=19% Similarity=0.354 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHH
Q 043156 171 NLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIF 215 (578)
Q Consensus 171 ~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~ 215 (578)
-+++....+++++| .+.|++.++ .+..+++.++..++++++.
T Consensus 11 ~l~~~il~~~~iis-fi~Gy~~q~--~~~~~~~~~~g~~~~~lv~ 52 (76)
T PF06645_consen 11 KLMQYILIISAIIS-FIVGYITQS--FSYTFYIYGAGVVLTLLVV 52 (76)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHH--HHHHHHHHHHHHHHHHhhe
Confidence 34555667777777 677777764 5667777666655555444
No 301
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.54 E-value=61 Score=27.00 Aligned_cols=39 Identities=15% Similarity=0.044 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhhc
Q 043156 66 NQVTNYMGTSYILSIVVALLADAFIGRFKAVLISGSVEF 104 (578)
Q Consensus 66 ~~~~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~~ 104 (578)
.-++.-.+.+.+.....||+-|+|.|.++..+|.+++..
T Consensus 46 ~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllG 84 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLG 84 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 334444556666666679999999777776665544433
No 302
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=29.46 E-value=2.4e+02 Score=23.29 Aligned_cols=27 Identities=22% Similarity=0.447 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccC
Q 043156 170 FNLLFLAVCIGGAISVTLIVWIQDNKG 196 (578)
Q Consensus 170 ~~~~~~~~~lG~~~~p~l~~~l~~~~g 196 (578)
+|...+.+.+..++|..++-||.+.++
T Consensus 45 ~g~IG~~~v~pil~G~~lG~WLD~~~~ 71 (100)
T TIGR02230 45 FGLIGWSVAIPTLLGVAVGIWLDRHYP 71 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 334555556666666667778877665
No 303
>PF01891 CbiM: Cobalt uptake substrate-specific transmembrane region; InterPro: IPR002751 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the integral membrane protein CbiM, which is involved in cobalamin synthesis, although its exact function in unknown.; GO: 0009236 cobalamin biosynthetic process, 0016021 integral to membrane
Probab=29.04 E-value=2.5e+02 Score=26.44 Aligned_cols=98 Identities=10% Similarity=0.038 Sum_probs=50.0
Q ss_pred CchhHHHHHHHHhhhhhhccccccccCCCCCCCchhhHhHhHHHHHHHHHHHHHHHHHHHhhhhhcCccCCCCCCCCccc
Q 043156 367 ILPILFMILAVPVYDRIFVPFAGKITGNPTGITHLQRVGVGLVLSCISMAIAAIFEVIRKDVARDHNMLDAIPVVQPLPI 446 (578)
Q Consensus 367 ~~~~i~~il~~~l~~~l~~~l~~r~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (578)
..|.+.+.+...+..+...|..+|+ ........+++...++...............+..+- .+...
T Consensus 106 G~N~l~m~~~~~~~~~~~~~~l~~~-------~~~~~~~~~F~ag~l~~~~~~~~~~~~l~l~~~~~~-------~~~~~ 171 (205)
T PF01891_consen 106 GANALNMGVPPVLVSYLLFRLLRRK-------FPRNIFVAGFLAGFLSVLLAALAVSLVLGLSGTAGD-------YPWMA 171 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc-------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc-------ccHHH
Confidence 3466667777777777777755553 111233334443334443333332221111111110 01123
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhheeeccCC
Q 043156 447 STFWLSIQFFIFGIADMFTYVGLLEFFYSEAP 478 (578)
Q Consensus 447 ~~~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P 478 (578)
........+...++.|++.+....++....-|
T Consensus 172 ~~~~~~~~~~~l~~~Eg~ltg~~v~~l~~~rP 203 (205)
T PF01891_consen 172 LVQAYLPSHLLLAFPEGFLTGMVVTFLVVYRP 203 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 33455667778899999988777666655555
No 304
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=28.66 E-value=47 Score=32.64 Aligned_cols=69 Identities=16% Similarity=0.210 Sum_probs=45.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccCCCCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHhhhccccccc
Q 043156 480 GIKSLSTCFLWCSMALGYFFSTILVNIVNSATRGITQSGGWLAGNNINRNHLNLFFWLLSALSFINFSVYLFMSSRYNYR 559 (578)
Q Consensus 480 ~~rg~~~g~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~ 559 (578)
+.|+..+.++...-++|..+..... +.... . .+..+.+|+..+.+.+++.++-+++|..+.+|.+..
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF--~~~~~------~-----~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~ 68 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPF--LISSS------V-----VIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIY 68 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhH--Hhcch------H-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 3456666666666677777775443 22100 0 011234688999999999999999999999987544
Q ss_pred cc
Q 043156 560 PQ 561 (578)
Q Consensus 560 ~~ 561 (578)
++
T Consensus 69 ~~ 70 (267)
T PF07672_consen 69 SP 70 (267)
T ss_pred Cc
Confidence 33
No 305
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.35 E-value=1e+02 Score=24.88 Aligned_cols=43 Identities=12% Similarity=0.154 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHH
Q 043156 171 NLLFLAVCIGGAISVTLIVWIQDNKGWDRGFGLSSVAVFLATIIFA 216 (578)
Q Consensus 171 ~~~~~~~~lG~~~~p~l~~~l~~~~g~~~~f~i~~~~~~~~~~~~~ 216 (578)
-+++....+|+++| .+-|+..+.++|. .++.++..++..++.+
T Consensus 26 r~~q~ilti~aiVg-~i~Gf~~Qqls~t--vy~vg~~~v~t~li~L 68 (101)
T KOG4112|consen 26 RFQQLILTIGAIVG-FIYGFAQQQLSVT--VYIVGAGFVFTLLITL 68 (101)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHH--HHHHHHHHHHHHHhcC
Confidence 35667778888888 5666666656643 2333444444444333
No 306
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=23.49 E-value=1.2e+02 Score=27.16 Aligned_cols=49 Identities=8% Similarity=-0.016 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhheeeccCCchhhHHHHHHHHHHHHHHHHHH
Q 043156 449 FWLSIQFFIFGIADMFTYVGLLEFFYSEAPKGIKSLSTCFLWCSMALGYFFS 500 (578)
Q Consensus 449 ~~~i~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ig~~lg 500 (578)
..++..++++++|. ....|...+..-.++..|+..|+-.+-.+++.+.-
T Consensus 98 ~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 98 AVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred HHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHHH
Confidence 34444445555543 33455666677778889999999998888876543
No 307
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=21.26 E-value=2.1e+02 Score=20.44 Aligned_cols=35 Identities=11% Similarity=0.165 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHhHHHHHhhhccchhhhhhhhhhhh
Q 043156 69 TNYMGTSYILSIVVALLADAFIGRFKAVLISGSVE 103 (578)
Q Consensus 69 ~~~~~~~~~~~~~~G~laD~~~Grr~~~~~~~~~~ 103 (578)
+....+..+.....|+..|+++|.++...+..++.
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~ll 41 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLL 41 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 33445566666777888898888866655544433
Done!