Query 043160
Match_columns 333
No_of_seqs 167 out of 1991
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 13:29:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043160.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043160hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 1E-38 2.2E-43 288.6 32.6 327 3-331 7-335 (358)
2 PRK11272 putative DMT superfam 100.0 6.6E-33 1.4E-37 246.7 29.1 285 4-328 2-289 (292)
3 PRK11453 O-acetylserine/cystei 100.0 2E-32 4.3E-37 244.5 29.0 279 10-327 5-290 (299)
4 PRK15430 putative chlorampheni 100.0 8E-33 1.7E-37 246.5 24.3 280 1-323 1-284 (296)
5 PRK11689 aromatic amino acid e 100.0 2.3E-32 5E-37 243.5 26.1 286 7-328 2-291 (295)
6 PRK10532 threonine and homoser 100.0 5.1E-31 1.1E-35 234.6 28.5 281 4-331 7-288 (293)
7 TIGR00950 2A78 Carboxylate/Ami 100.0 5.1E-31 1.1E-35 231.2 26.0 257 21-319 1-259 (260)
8 TIGR00817 tpt Tpt phosphate/ph 100.0 1.3E-30 2.7E-35 233.4 26.8 289 11-333 4-302 (302)
9 TIGR03340 phn_DUF6 phosphonate 100.0 4.7E-28 1E-32 214.4 28.1 273 11-321 3-280 (281)
10 PTZ00343 triose or hexose phos 100.0 3.3E-27 7.1E-32 214.5 27.4 285 7-325 47-349 (350)
11 TIGR00688 rarD rarD protein. T 100.0 2.1E-26 4.6E-31 201.3 25.1 248 9-299 2-255 (256)
12 PF06027 DUF914: Eukaryotic pr 100.0 1.7E-25 3.6E-30 198.4 28.1 297 8-329 12-310 (334)
13 COG0697 RhaT Permeases of the 99.9 5.1E-24 1.1E-28 189.5 29.6 283 4-325 2-288 (292)
14 COG2962 RarD Predicted permeas 99.9 1.7E-24 3.8E-29 182.8 24.8 281 4-326 2-285 (293)
15 COG5006 rhtA Threonine/homoser 99.9 1.2E-22 2.6E-27 167.1 23.7 275 10-330 13-288 (292)
16 KOG4510 Permease of the drug/m 99.9 5.7E-26 1.2E-30 187.8 0.2 293 6-327 35-328 (346)
17 TIGR00776 RhaT RhaT L-rhamnose 99.9 5E-21 1.1E-25 169.7 23.9 279 10-325 2-289 (290)
18 PF08449 UAA: UAA transporter 99.9 2E-19 4.4E-24 160.8 25.6 269 37-330 31-303 (303)
19 KOG2765 Predicted membrane pro 99.8 2.9E-20 6.3E-25 161.4 15.9 232 73-328 159-394 (416)
20 KOG1441 Glucose-6-phosphate/ph 99.8 4.5E-19 9.8E-24 155.5 8.4 287 14-333 22-316 (316)
21 COG2510 Predicted membrane pro 99.7 1.1E-17 2.3E-22 123.7 9.6 135 9-151 3-138 (140)
22 PF04142 Nuc_sug_transp: Nucle 99.7 4.6E-15 9.9E-20 127.6 18.0 230 69-315 13-244 (244)
23 KOG2234 Predicted UDP-galactos 99.7 2.5E-13 5.4E-18 118.7 27.5 299 9-329 15-327 (345)
24 COG2510 Predicted membrane pro 99.6 6.2E-15 1.3E-19 109.1 13.8 136 186-324 4-139 (140)
25 KOG1444 Nucleotide-sugar trans 99.6 3.8E-13 8.2E-18 115.9 24.4 290 6-328 9-304 (314)
26 PF00892 EamA: EamA-like trans 99.6 7E-15 1.5E-19 113.9 10.6 125 19-151 1-125 (126)
27 KOG2766 Predicted membrane pro 99.5 2.1E-15 4.6E-20 124.6 3.1 271 22-327 31-302 (336)
28 KOG1580 UDP-galactose transpor 99.5 5.4E-13 1.2E-17 109.2 16.1 258 39-324 54-313 (337)
29 KOG1581 UDP-galactose transpor 99.5 4.8E-13 1E-17 113.8 14.7 262 37-325 50-314 (327)
30 KOG1443 Predicted integral mem 99.5 2.5E-12 5.4E-17 109.5 18.6 254 38-323 45-314 (349)
31 PF00892 EamA: EamA-like trans 99.4 4.1E-13 9E-18 103.8 7.6 124 195-323 1-125 (126)
32 KOG3912 Predicted integral mem 99.4 9.1E-12 2E-16 104.7 14.1 279 21-323 15-333 (372)
33 TIGR00950 2A78 Carboxylate/Ami 99.4 1.7E-11 3.6E-16 107.4 15.5 133 6-147 125-259 (260)
34 PF06800 Sugar_transport: Suga 99.4 3.8E-10 8.3E-15 96.9 21.5 251 37-321 11-268 (269)
35 PRK13499 rhamnose-proton sympo 99.3 2.9E-09 6.3E-14 95.1 27.8 304 3-326 1-343 (345)
36 PF13536 EmrE: Multidrug resis 99.3 1E-11 2.2E-16 94.3 8.6 104 43-153 2-107 (113)
37 KOG4314 Predicted carbohydrate 99.3 9.5E-12 2.1E-16 99.4 8.6 221 77-329 57-281 (290)
38 COG5070 VRG4 Nucleotide-sugar 99.3 3.1E-11 6.7E-16 98.3 9.9 274 24-326 21-298 (309)
39 PF05653 Mg_trans_NIPA: Magnes 99.2 1E-09 2.2E-14 97.3 18.7 283 3-330 1-298 (300)
40 PRK10532 threonine and homoser 99.2 5.7E-10 1.2E-14 99.5 17.3 135 8-152 147-281 (293)
41 PRK11272 putative DMT superfam 99.2 5.4E-10 1.2E-14 99.6 16.4 137 8-152 149-285 (292)
42 PLN00411 nodulin MtN21 family 99.2 1.2E-09 2.7E-14 99.4 17.7 137 9-154 189-330 (358)
43 PF03151 TPT: Triose-phosphate 99.2 2.4E-10 5.3E-15 91.7 11.6 139 186-324 1-153 (153)
44 KOG1442 GDP-fucose transporter 99.2 1.9E-11 4.1E-16 102.5 4.6 271 26-326 45-329 (347)
45 KOG1583 UDP-N-acetylglucosamin 99.2 6.1E-10 1.3E-14 93.7 13.1 268 39-323 34-313 (330)
46 TIGR03340 phn_DUF6 phosphonate 99.1 7.5E-10 1.6E-14 98.1 13.5 134 187-325 3-136 (281)
47 PRK11689 aromatic amino acid e 99.1 2.5E-09 5.3E-14 95.5 15.7 133 8-152 155-287 (295)
48 PRK15430 putative chlorampheni 99.1 1.4E-09 3E-14 97.2 12.3 139 181-324 4-145 (296)
49 TIGR00803 nst UDP-galactose tr 99.0 8.9E-10 1.9E-14 94.2 9.0 215 99-322 3-222 (222)
50 TIGR00688 rarD rarD protein. T 99.0 2.5E-09 5.5E-14 93.5 11.7 138 185-324 2-142 (256)
51 PRK11453 O-acetylserine/cystei 99.0 1.7E-08 3.7E-13 90.2 16.8 137 8-151 142-286 (299)
52 KOG1582 UDP-galactose transpor 99.0 2.3E-08 4.9E-13 84.1 14.0 225 73-326 106-334 (367)
53 TIGR00817 tpt Tpt phosphate/ph 98.9 1.5E-08 3.2E-13 90.8 12.0 138 8-152 144-293 (302)
54 PRK02971 4-amino-4-deoxy-L-ara 98.9 3.7E-08 8E-13 76.0 11.9 123 185-329 2-127 (129)
55 PF03151 TPT: Triose-phosphate 98.9 1E-07 2.2E-12 76.4 14.6 133 10-149 1-150 (153)
56 PRK15051 4-amino-4-deoxy-L-ara 98.8 2.7E-07 5.9E-12 69.4 12.6 68 78-151 41-108 (111)
57 PF13536 EmrE: Multidrug resis 98.8 3.1E-08 6.7E-13 75.1 7.5 108 220-329 3-111 (113)
58 TIGR00776 RhaT RhaT L-rhamnose 98.7 2.3E-07 4.9E-12 82.5 13.9 130 7-151 150-287 (290)
59 PTZ00343 triose or hexose phos 98.7 5.1E-07 1.1E-11 82.4 16.4 138 8-151 193-347 (350)
60 COG4975 GlcU Putative glucose 98.7 3.2E-09 6.9E-14 88.0 0.8 278 9-323 2-284 (288)
61 COG0697 RhaT Permeases of the 98.7 7.7E-07 1.7E-11 78.9 16.1 133 8-151 153-286 (292)
62 PRK02971 4-amino-4-deoxy-L-ara 98.6 9.6E-07 2.1E-11 68.1 12.1 118 9-151 2-121 (129)
63 PF06027 DUF914: Eukaryotic pr 98.5 1.9E-06 4.2E-11 77.2 13.2 144 5-156 164-309 (334)
64 COG5006 rhtA Threonine/homoser 98.5 2.8E-06 6.1E-11 71.2 12.1 137 7-152 146-282 (292)
65 KOG2922 Uncharacterized conser 98.5 4.2E-07 9.1E-12 78.8 6.8 280 3-329 15-311 (335)
66 COG2962 RarD Predicted permeas 98.4 1.4E-06 3.1E-11 74.7 9.4 140 184-326 6-146 (293)
67 PRK15051 4-amino-4-deoxy-L-ara 98.4 1.2E-06 2.6E-11 65.9 8.0 66 259-324 43-109 (111)
68 PF06379 RhaT: L-rhamnose-prot 98.2 0.0015 3.2E-08 57.9 22.9 305 3-325 1-341 (344)
69 PF06800 Sugar_transport: Suga 98.1 6.2E-05 1.3E-09 65.1 12.3 134 5-148 134-267 (269)
70 KOG4510 Permease of the drug/m 98.1 1.4E-06 3E-11 73.5 2.0 135 184-326 37-171 (346)
71 PF05653 Mg_trans_NIPA: Magnes 98.0 2.8E-05 6.1E-10 69.1 8.9 118 181-324 3-122 (300)
72 PF08449 UAA: UAA transporter 98.0 0.00011 2.4E-09 65.8 12.8 126 197-328 12-140 (303)
73 PF10639 UPF0546: Uncharacteri 98.0 1.2E-05 2.6E-10 59.8 4.9 110 15-150 2-112 (113)
74 PRK10452 multidrug efflux syst 97.9 0.0001 2.2E-09 55.8 9.3 67 262-328 40-107 (120)
75 PF04657 DUF606: Protein of un 97.9 0.00017 3.6E-09 56.5 10.7 131 187-321 3-138 (138)
76 PRK09541 emrE multidrug efflux 97.8 0.00016 3.6E-09 54.0 9.0 66 262-327 40-106 (110)
77 PRK10650 multidrug efflux syst 97.8 0.00042 9E-09 51.6 11.0 64 81-150 42-106 (109)
78 PF04657 DUF606: Protein of un 97.8 0.00074 1.6E-08 52.8 11.8 130 11-149 3-138 (138)
79 PRK10452 multidrug efflux syst 97.7 0.00018 3.8E-09 54.5 7.6 68 79-152 35-103 (120)
80 COG2076 EmrE Membrane transpor 97.7 0.0002 4.3E-09 52.5 7.4 67 79-151 35-102 (106)
81 PRK09541 emrE multidrug efflux 97.7 0.00023 5E-09 53.2 8.0 66 80-151 36-102 (110)
82 KOG1441 Glucose-6-phosphate/ph 97.6 0.00024 5.2E-09 63.1 7.6 137 7-151 161-306 (316)
83 PRK11431 multidrug efflux syst 97.6 0.00041 8.8E-09 51.3 7.6 65 81-151 36-101 (105)
84 PRK10650 multidrug efflux syst 97.6 0.0007 1.5E-08 50.4 8.8 64 260-323 43-107 (109)
85 COG3238 Uncharacterized protei 97.5 0.00094 2E-08 52.3 9.5 140 185-327 5-149 (150)
86 PRK11431 multidrug efflux syst 97.5 0.0003 6.5E-09 52.0 6.4 65 261-325 38-103 (105)
87 COG2076 EmrE Membrane transpor 97.5 0.00023 4.9E-09 52.1 5.3 67 260-326 38-105 (106)
88 KOG2765 Predicted membrane pro 97.2 0.0026 5.6E-08 56.8 9.6 142 6-153 244-391 (416)
89 PF07857 DUF1632: CEO family ( 97.2 0.0044 9.4E-08 53.4 10.4 185 10-206 1-204 (254)
90 PF04142 Nuc_sug_transp: Nucle 97.2 0.0011 2.3E-08 57.3 6.8 79 250-328 15-93 (244)
91 PF00893 Multi_Drug_Res: Small 97.1 0.0031 6.7E-08 45.8 7.8 57 80-142 35-92 (93)
92 PF00893 Multi_Drug_Res: Small 97.1 0.0024 5.2E-08 46.3 7.1 55 261-315 38-93 (93)
93 PRK13499 rhamnose-proton sympo 97.1 0.036 7.8E-07 50.1 15.3 145 6-152 171-341 (345)
94 COG3238 Uncharacterized protei 96.9 0.026 5.6E-07 44.3 11.6 137 9-150 5-144 (150)
95 COG4975 GlcU Putative glucose 96.9 0.0012 2.6E-08 55.5 4.1 134 186-329 3-141 (288)
96 PF10639 UPF0546: Uncharacteri 96.4 0.011 2.4E-07 44.1 6.2 108 192-322 3-112 (113)
97 TIGR00803 nst UDP-galactose tr 96.3 0.017 3.7E-07 49.2 7.5 62 80-148 159-220 (222)
98 KOG1581 UDP-galactose transpor 96.1 0.088 1.9E-06 46.0 10.8 141 5-153 168-314 (327)
99 KOG2922 Uncharacterized conser 96.0 0.0049 1.1E-07 54.0 2.8 119 181-324 17-136 (335)
100 KOG2234 Predicted UDP-galactos 96.0 0.48 1E-05 42.5 15.0 142 185-326 15-166 (345)
101 KOG4831 Unnamed protein [Funct 95.8 0.023 4.9E-07 41.1 5.0 113 11-151 5-124 (125)
102 KOG1580 UDP-galactose transpor 95.2 0.15 3.2E-06 42.9 8.4 137 7-151 170-312 (337)
103 KOG1444 Nucleotide-sugar trans 94.9 0.33 7.2E-06 42.8 10.2 137 9-152 157-300 (314)
104 KOG4314 Predicted carbohydrate 94.8 0.015 3.3E-07 47.3 1.6 67 263-329 64-130 (290)
105 COG5070 VRG4 Nucleotide-sugar 94.2 0.4 8.7E-06 40.1 8.5 136 10-152 156-296 (309)
106 KOG1443 Predicted integral mem 93.5 0.49 1.1E-05 41.6 8.2 126 203-328 34-160 (349)
107 PF06379 RhaT: L-rhamnose-prot 90.7 1.2 2.6E-05 40.0 7.5 142 181-325 3-154 (344)
108 PF07857 DUF1632: CEO family ( 90.0 0.43 9.4E-06 41.3 4.1 130 186-327 1-137 (254)
109 PRK02237 hypothetical protein; 87.1 3 6.6E-05 30.6 6.2 46 282-327 63-108 (109)
110 KOG1442 GDP-fucose transporter 86.9 1.1 2.3E-05 38.9 4.4 142 7-155 183-330 (347)
111 KOG2766 Predicted membrane pro 84.8 0.11 2.4E-06 44.2 -2.3 136 181-324 14-150 (336)
112 KOG3912 Predicted integral mem 84.1 1.3 2.7E-05 38.6 3.5 67 258-324 92-158 (372)
113 KOG1582 UDP-galactose transpor 83.6 11 0.00023 32.9 8.8 139 9-154 190-334 (367)
114 PF02694 UPF0060: Uncharacteri 83.6 2 4.4E-05 31.5 3.9 43 285-327 64-106 (107)
115 PF04342 DUF486: Protein of un 82.9 1.4 3.1E-05 32.2 2.9 32 292-323 76-107 (108)
116 KOG4831 Unnamed protein [Funct 82.5 5.4 0.00012 29.2 5.6 62 262-323 62-124 (125)
117 PF07168 Ureide_permease: Urei 78.6 0.72 1.6E-05 40.5 0.3 112 14-128 1-126 (336)
118 KOG1583 UDP-N-acetylglucosamin 77.1 4.5 9.8E-05 35.2 4.6 68 262-329 74-142 (330)
119 COG3169 Uncharacterized protei 76.3 5.6 0.00012 28.6 4.1 35 290-324 81-115 (116)
120 COG1742 Uncharacterized conser 74.2 13 0.00029 27.1 5.6 48 281-328 61-108 (109)
121 PF04342 DUF486: Protein of un 64.6 54 0.0012 24.1 8.4 31 112-148 74-104 (108)
122 PF06570 DUF1129: Protein of u 63.1 89 0.0019 26.1 11.8 30 72-102 145-174 (206)
123 PRK02237 hypothetical protein; 60.8 66 0.0014 23.8 10.1 49 98-152 56-105 (109)
124 PF02694 UPF0060: Uncharacteri 55.4 16 0.00034 26.9 3.1 52 95-152 51-103 (107)
125 PF07168 Ureide_permease: Urei 49.8 13 0.00028 32.9 2.3 131 191-323 2-145 (336)
126 COG1742 Uncharacterized conser 46.7 46 0.001 24.4 4.3 40 107-152 65-104 (109)
127 PF06166 DUF979: Protein of un 40.9 2.4E+02 0.0052 25.1 8.6 23 122-151 44-66 (308)
128 PF12292 DUF3624: Protein of u 36.2 1.3E+02 0.0028 20.8 4.9 46 13-59 25-70 (77)
129 PF05297 Herpes_LMP1: Herpesvi 36.0 12 0.00026 32.6 0.0 32 95-126 44-76 (381)
130 TIGR01167 LPXTG_anchor LPXTG-m 35.4 46 0.00099 18.4 2.4 21 304-324 10-30 (34)
131 COG3086 RseC Positive regulato 29.4 14 0.0003 28.8 -0.6 20 280-299 76-95 (150)
132 PF08693 SKG6: Transmembrane a 28.3 55 0.0012 19.4 1.9 19 310-328 21-39 (40)
133 COG2211 MelB Na+/melibiose sym 26.5 5.8E+02 0.013 24.5 14.0 114 95-231 42-164 (467)
134 PF11361 DUF3159: Protein of u 26.0 3.8E+02 0.0082 22.1 7.2 43 102-151 28-70 (187)
135 PF08802 CytB6-F_Fe-S: Cytochr 25.0 1.2E+02 0.0027 17.9 3.0 30 66-95 4-33 (39)
136 PF15102 TMEM154: TMEM154 prot 23.4 70 0.0015 25.1 2.2 21 310-330 67-87 (146)
137 CHL00196 psbY photosystem II p 23.2 1.3E+02 0.0028 17.4 2.7 20 185-204 6-25 (36)
138 PF11381 DUF3185: Protein of u 23.0 1.1E+02 0.0023 20.0 2.7 18 136-153 1-18 (59)
139 PF11044 TMEMspv1-c74-12: Plec 22.2 35 0.00075 20.6 0.3 16 304-319 2-17 (49)
140 PF07123 PsbW: Photosystem II 21.3 85 0.0018 24.3 2.3 31 178-209 100-130 (138)
141 COG4657 RnfA Predicted NADH:ub 21.2 4.4E+02 0.0096 21.2 10.2 53 181-233 128-185 (193)
142 PF08733 PalH: PalH/RIM21; In 20.2 6.7E+02 0.015 22.9 8.6 85 8-92 197-284 (348)
143 TIGR02865 spore_II_E stage II 20.1 9.7E+02 0.021 24.7 14.1 45 100-150 10-54 (764)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=1e-38 Score=288.55 Aligned_cols=327 Identities=28% Similarity=0.549 Sum_probs=255.7
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCCCHHHHHHHHHHHH
Q 043160 3 LQYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLER-KTRPKMTFRIFAKIALLGL 81 (333)
Q Consensus 3 ~~~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~ 81 (333)
...|+.+.+..|+...+.++...++.|.+++.+++|..+.++|+.++.+++.++...++| +.+++.+++++.++.+.|+
T Consensus 7 ~~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~ 86 (358)
T PLN00411 7 LWRREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGF 86 (358)
T ss_pred hhhhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHH
Confidence 345678999999999999999999999999999999999999999999999998877655 3334556788899999999
Q ss_pred HHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCC
Q 043160 82 FEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFP 161 (333)
Q Consensus 82 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~ 161 (333)
++ ...+.++++|+++++++.++++.++.|+++.+++++++.|+++.+||.++.|++|++++++|+.++...+++.....
T Consensus 87 ~g-~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~ 165 (358)
T PLN00411 87 LG-SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVA 165 (358)
T ss_pred HH-HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence 99 77888999999999999999999999999999999996455555555555569999999999999875444321000
Q ss_pred chhhhhhcccCC-CCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCC
Q 043160 162 WKQVRILHNQSE-TGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGN 240 (333)
Q Consensus 162 ~~~~~~~~~~~~-~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (333)
++....+..+.. ....+. .+...|+++.+.++++|++|++.+|+..+++++....++++...+.+...+.....++.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~-~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~ 244 (358)
T PLN00411 166 SSPPYLNFRQLSPPLSSSN-SDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNN 244 (358)
T ss_pred cccccccccccccccCCCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 000000000000 001123 345679999999999999999999999999876667777877777776666666554312
Q ss_pred ccceeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhh
Q 043160 241 TGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLY 320 (333)
Q Consensus 241 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~ 320 (333)
...+....+.....+++.++++.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++|+.|++
T Consensus 245 ~~~~~~~~~~~~~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~ 324 (358)
T PLN00411 245 PSVWIIHFDITLITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFY 324 (358)
T ss_pred cccceeccchHHHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence 23332222233445777777766899999999999999999999999999999999999999999999999999999999
Q ss_pred hheecCCCCCC
Q 043160 321 MVLWGRSKDQS 331 (333)
Q Consensus 321 ~~~~~~~~~~~ 331 (333)
+..++++||.+
T Consensus 325 l~~~~~~~~~~ 335 (358)
T PLN00411 325 AVMWGKANEEK 335 (358)
T ss_pred HHHhhhhhhhh
Confidence 99987766543
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=100.00 E-value=6.6e-33 Score=246.71 Aligned_cols=285 Identities=16% Similarity=0.192 Sum_probs=233.4
Q ss_pred cccccH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHH
Q 043160 4 QYHHAK-PYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLF 82 (333)
Q Consensus 4 ~~~~~~-~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 82 (333)
+.|+.. -++..+...++||.++++.|... ++++|.+++++|+.++.++++++...++++ ..+++++.+....|.+
T Consensus 2 ~~~~~~~~~~~~~~~~~iWg~~~~~~K~~~-~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~---~~~~~~~~~~~~~g~~ 77 (292)
T PRK11272 2 RFRQLLPLFGALFALYIIWGSTYLVIRIGV-ESWPPLMMAGVRFLIAGILLLAFLLLRGHP---LPTLRQWLNAALIGLL 77 (292)
T ss_pred chHHHHHHHHHHHHHHHHHhhHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHHhCCC---CCcHHHHHHHHHHHHH
Confidence 344443 35667778999999999999994 689999999999999999998876543222 2356778888888888
Q ss_pred HHHHHHHHHHHHh-cccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCC
Q 043160 83 EPVIGQNLYFTGL-KCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFP 161 (333)
Q Consensus 83 ~~~~~~~~~~~al-~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~ 161 (333)
+...++.+++++. ++++++.++++.++.|+++.+++.+ +|||+++++ ++|++++++|+.++...+
T Consensus 78 ~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~------~~~~~la~~Gv~ll~~~~------- 143 (292)
T PRK11272 78 LLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLE------WLGIAIGLAGIVLLNSGG------- 143 (292)
T ss_pred HHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhH------HHHHHHHHHhHHHHhcCc-------
Confidence 7677888999999 9999999999999999999999986 699999997 999999999999875210
Q ss_pred chhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCc
Q 043160 162 WKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNT 241 (333)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (333)
+. +....|+++++.++++||.|.+..||..++ ++...+.+++..+.+...+.....+. +.
T Consensus 144 ----------------~~-~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 203 (292)
T PRK11272 144 ----------------NL-SGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGE-RL 203 (292)
T ss_pred ----------------cc-ccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCC-cc
Confidence 11 223479999999999999999999986543 34556778888888877777654332 11
Q ss_pred cceeeccchhHHHHHHHHHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhh
Q 043160 242 GIWLLHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLY 320 (333)
Q Consensus 242 ~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~ 320 (333)
. ..++...|..+++.+++ +.+++.+|++++++.+++.++.+.+++|+++.+++++++||++++.+++|+++++.|++
T Consensus 204 ~--~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~ 281 (292)
T PRK11272 204 T--ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVV 281 (292)
T ss_pred c--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHH
Confidence 1 11233568888999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred hheecCCC
Q 043160 321 MVLWGRSK 328 (333)
Q Consensus 321 ~~~~~~~~ 328 (333)
+..+++++
T Consensus 282 ~~~~~~~~ 289 (292)
T PRK11272 282 LVTLGKYL 289 (292)
T ss_pred HHHHHHhh
Confidence 98876654
No 3
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=100.00 E-value=2e-32 Score=244.49 Aligned_cols=279 Identities=18% Similarity=0.250 Sum_probs=216.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 043160 10 PYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQN 89 (333)
Q Consensus 10 ~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 89 (333)
..++.++++++||.++++.|..+ ++++|..+.++|+.++++.+.++. .++ +.++ +.....|.+.....+.
T Consensus 5 ~~l~~l~~~~~Wg~~~~~~k~~~-~~~~p~~~~~~R~~~a~~~l~~~~---~~~---~~~~---~~~~~~g~~~~~~~~~ 74 (299)
T PRK11453 5 DGVLALLVVVVWGLNFVVIKVGL-HNMPPLMLAGLRFMLVAFPAIFFV---ARP---KVPL---NLLLGYGLTISFGQFA 74 (299)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHh---cCC---CCch---HHHHHHHHHHHHHHHH
Confidence 34668899999999999999995 679999999999999877665543 111 1122 2344456655355666
Q ss_pred HHHHHhcc-cchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhh
Q 043160 90 LYFTGLKC-STATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRIL 168 (333)
Q Consensus 90 ~~~~al~~-~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~ 168 (333)
+++.++++ .+++.++++.++.|+++.+++++++|||+++++ +++++++++|+.++.. +..
T Consensus 75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~------~~~~~l~~~Gv~ll~~---~~~---------- 135 (299)
T PRK11453 75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQ------LAGIALAIFGVLVLIE---DSL---------- 135 (299)
T ss_pred HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHhHHHhcc---ccC----------
Confidence 77889988 588999999999999999999999999999997 9999999999999872 110
Q ss_pred cccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCc--hHHHHHHHHHHHHHHHHHHHhhccCCc---cc
Q 043160 169 HNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAE--LSLTALMCFVSSVEGTILALAIERGNT---GI 243 (333)
Q Consensus 169 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 243 (333)
.+. +....|+++++.++++|++|.+.+|+..++.+++ .....+.+..+.+.........++ +. ..
T Consensus 136 --------~~~-~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 205 (299)
T PRK11453 136 --------NGQ-HVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDG-SATMIHS 205 (299)
T ss_pred --------CCc-chhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcC-chhhhhh
Confidence 122 3335799999999999999999999977665432 333445555554444444333332 11 11
Q ss_pred eeeccchhHHHHHHHHHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhh
Q 043160 244 WLLHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMV 322 (333)
Q Consensus 244 ~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~ 322 (333)
+...+...|..+++++++ +.++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|++++++|+++.
T Consensus 206 ~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~ 285 (299)
T PRK11453 206 LVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYIN 285 (299)
T ss_pred hccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence 112233678889999999 9999999999999999999999999999999999999999999999999999999999998
Q ss_pred eecCC
Q 043160 323 LWGRS 327 (333)
Q Consensus 323 ~~~~~ 327 (333)
.++++
T Consensus 286 ~~~~~ 290 (299)
T PRK11453 286 VFGLR 290 (299)
T ss_pred hcchh
Confidence 76654
No 4
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=100.00 E-value=8e-33 Score=246.53 Aligned_cols=280 Identities=12% Similarity=0.052 Sum_probs=208.2
Q ss_pred CcccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCC--C-CCCHHHHHHHH
Q 043160 1 MILQYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTR--P-KMTFRIFAKIA 77 (333)
Q Consensus 1 m~~~~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~--~-~~~~~~~~~~~ 77 (333)
|+|+ ++.+|.+++++++++||.+++..|.. ++++|.++.++|+.++.+++.++...+++++. + ..+++++.. .
T Consensus 1 ~~~~-~~~~g~~~~l~a~~~wg~~~~~~k~~--~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~ 76 (296)
T PRK15430 1 MDAK-QTRQGVLLALAAYFIWGIAPAYFKLI--YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM-L 76 (296)
T ss_pred CCch-hhhhHHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH-H
Confidence 7787 55689999999999999999999986 46999999999999999888776544322110 0 112333333 3
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCc
Q 043160 78 LLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPI 157 (333)
Q Consensus 78 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~ 157 (333)
..+.++.+.++.++++|++++|+++++++.++.|+++.+++++++|||+++++ ++|++++++|+.++...+
T Consensus 77 ~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~------~~g~~l~~~Gv~li~~~~--- 147 (296)
T PRK15430 77 AVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQ------WLAVILAICGVLVQLWTF--- 147 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH------HHHHHHHHHHHHHHHHHc---
Confidence 45666668899999999999999999999999999999999999999999998 999999999999986210
Q ss_pred ccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-CchHHHHHHHHHHHHHHHHHHHhh
Q 043160 158 LEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYP-AELSLTALMCFVSSVEGTILALAI 236 (333)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 236 (333)
++ . ..+++.++++||.|.+..|+..++.. +....+.+....+.....+. .
T Consensus 148 --------------------~~-~-----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 198 (296)
T PRK15430 148 --------------------GS-L-----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---A 198 (296)
T ss_pred --------------------CC-c-----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---c
Confidence 11 1 14678889999999999888643221 11222233333333222111 1
Q ss_pred ccCCccceeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHH
Q 043160 237 ERGNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIV 316 (333)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~ 316 (333)
+. ....+...+...+..+...++.+.+++.++++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+
T Consensus 199 ~~-~~~~~~~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~ 277 (296)
T PRK15430 199 DS-STSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIW 277 (296)
T ss_pred cC-CcccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 11 11111111112233344445558899999999999999999999999999999999999999999999999999998
Q ss_pred hhhhhhe
Q 043160 317 IGLYMVL 323 (333)
Q Consensus 317 ~g~~~~~ 323 (333)
.|+.+..
T Consensus 278 ~~~~v~~ 284 (296)
T PRK15430 278 VALAIFV 284 (296)
T ss_pred HHHHHHH
Confidence 8866654
No 5
>PRK11689 aromatic amino acid exporter; Provisional
Probab=100.00 E-value=2.3e-32 Score=243.45 Aligned_cols=286 Identities=13% Similarity=0.075 Sum_probs=214.8
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 043160 7 HAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVI 86 (333)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 86 (333)
+.++.++++.+.++||.+++..|..+ ++++|..+.++|+.++.+++.++. .+ ++.++++++ ..+.+.+....
T Consensus 2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~-~~~~P~~~~~~R~~~a~l~l~~~~---~~---~~~~~~~~~-~~~~~~l~~~~ 73 (295)
T PRK11689 2 SQKATLIGLIAILLWSTMVGLIRGVS-ESLGPVGGAAMIYSVSGLLLLLTV---GF---PRLRQFPKR-YLLAGGLLFVS 73 (295)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHH-ccCChHHHHHHHHHHHHHHHHHHc---cc---cccccccHH-HHHHHhHHHHH
Confidence 56788999999999999999999994 779999999999999999888653 11 111222222 34445555567
Q ss_pred HHHHHHHHhc----ccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCc
Q 043160 87 GQNLYFTGLK----CSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPW 162 (333)
Q Consensus 87 ~~~~~~~al~----~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~ 162 (333)
++.+++.+++ .+++++++++.++.|+++.+++++++|||+++++ ++|++++++|+.++.. ++...
T Consensus 74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~------~~g~~l~~~Gv~li~~---~~~~~-- 142 (295)
T PRK11689 74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLL------IPGLLLALAGVAWVLG---GDNGL-- 142 (295)
T ss_pred HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHH------HHHHHHHHHhHhheec---CCccc--
Confidence 7777777775 4678888999999999999999999999999997 9999999999999872 11100
Q ss_pred hhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCcc
Q 043160 163 KQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTG 242 (333)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (333)
+..+.+ .+. .+...|+++++.++++||+|++..||..++. ++.+.. ...+.+.+.+.... ++ +.
T Consensus 143 ~~~~~~--------~~~-~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~~---~~~~~~~l~~~~~~-~~-~~- 206 (295)
T PRK11689 143 SLAELI--------NNI-ASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITLF---FILTALALWIKYFL-SP-QP- 206 (295)
T ss_pred hhhhhh--------hcc-ccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhHH---HHHHHHHHHHHHHH-hc-Cc-
Confidence 000000 011 2234699999999999999999999986665 445332 22333333333322 22 11
Q ss_pred ceeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhh
Q 043160 243 IWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMV 322 (333)
Q Consensus 243 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~ 322 (333)
... .+...|..+++.++.+.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++.
T Consensus 207 ~~~-~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~ 285 (295)
T PRK11689 207 AMV-FSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLC 285 (295)
T ss_pred ccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHH
Confidence 111 2235677777777559999999999999999999999999999999999999999999999999999999999888
Q ss_pred eecCCC
Q 043160 323 LWGRSK 328 (333)
Q Consensus 323 ~~~~~~ 328 (333)
...+++
T Consensus 286 ~~~~~~ 291 (295)
T PRK11689 286 WLATRR 291 (295)
T ss_pred hhhHhH
Confidence 765543
No 6
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=100.00 E-value=5.1e-31 Score=234.62 Aligned_cols=281 Identities=11% Similarity=0.065 Sum_probs=222.2
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 043160 4 QYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFE 83 (333)
Q Consensus 4 ~~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 83 (333)
|..+.+++.+++++.++|+.++.+.|+++ ++++|..+.++|+.++.++++++.. .++ ++.++++++.....|.+.
T Consensus 7 ~~~~~~~~~~~~la~~~~~~~~~~~K~~~-~~~~~~~~~~~R~~~a~l~l~~~~~--~~~--~~~~~~~~~~~~~~g~~~ 81 (293)
T PRK10532 7 KLPVWLPILLLLIAMASIQSGASLAKSLF-PLVGAPGVTALRLALGTLILIAIFK--PWR--LRFAKEQRLPLLFYGVSL 81 (293)
T ss_pred ccccchHHHHHHHHHHHHHhhHHHHHHHH-HHcCHHHHHHHHHHHHHHHHHHHHh--HHh--ccCCHHHHHHHHHHHHHH
Confidence 34567899999999999999999999996 5699999999999999988886642 222 234567788888888876
Q ss_pred HHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCch
Q 043160 84 PVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWK 163 (333)
Q Consensus 84 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~ 163 (333)
...+.+++++++++|++.++++.++.|+++.+++. ||.. + ..++.++++|+.++.. .+.
T Consensus 82 -~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--~------~~~~~i~~~Gv~li~~-~~~------- 140 (293)
T PRK10532 82 -GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--D------FVWVVLAVLGLWFLLP-LGQ------- 140 (293)
T ss_pred -HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--H------HHHHHHHHHHHheeee-cCC-------
Confidence 88889999999999999999999999999998863 4432 2 4567788999988751 110
Q ss_pred hhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccc
Q 043160 164 QVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGI 243 (333)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (333)
+.. +....|+++++.++++|++|.+..|+..++. ++... .+....+.+...+.....+ ....
T Consensus 141 -------------~~~-~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~-~~~~~-~~~~~~~~~~l~~~~~~~~--~~~~ 202 (293)
T PRK10532 141 -------------DVS-HVDLTGAALALGAGACWAIYILSGQRAGAEH-GPATV-AIGSLIAALIFVPIGALQA--GEAL 202 (293)
T ss_pred -------------Ccc-cCChHHHHHHHHHHHHHHHHHHHHHHHhccC-CchHH-HHHHHHHHHHHHHHHHHcc--Cccc
Confidence 011 2234799999999999999999999987665 44544 4555666666666664322 1111
Q ss_pred eeeccchhHHHHHHHHHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhh
Q 043160 244 WLLHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMV 322 (333)
Q Consensus 244 ~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~ 322 (333)
.+...|..++++|++ +.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|++|++..
T Consensus 203 ---~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~ 279 (293)
T PRK10532 203 ---WHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGS 279 (293)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence 122445566789999 9999999999999999999999999999999999999999999999999999999999988
Q ss_pred eecCCCCCC
Q 043160 323 LWGRSKDQS 331 (333)
Q Consensus 323 ~~~~~~~~~ 331 (333)
.+..+||.|
T Consensus 280 ~~~~~~~~~ 288 (293)
T PRK10532 280 TLTIRREPK 288 (293)
T ss_pred HhcCCCCCC
Confidence 776655544
No 7
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=100.00 E-value=5.1e-31 Score=231.21 Aligned_cols=257 Identities=18% Similarity=0.220 Sum_probs=217.2
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 043160 21 SSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTA 100 (333)
Q Consensus 21 ~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~ 100 (333)
||.+++..|..++++.++....+.|...+.+++.++...+ .+++++.+....|.++..+++.++++|++++++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~ 73 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV 73 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 8999999999977789999999999999988887754321 235667778888888879999999999999999
Q ss_pred hhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhcccCCCCCCCcc
Q 043160 101 TFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKE 180 (333)
Q Consensus 101 ~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (333)
++++++.++.|+++.+++.+++|||+++++ ++|++++++|+.++.. ++ +.
T Consensus 74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~------~~gi~i~~~Gv~li~~-~~----------------------~~- 123 (260)
T TIGR00950 74 GEAALLLYLAPLYVTLLSDLMGKERPRKLV------LLAAVLGLAGAVLLLS-DG----------------------NL- 123 (260)
T ss_pred hhhHHHHhhhHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHhhcc-CC----------------------cc-
Confidence 999999999999999999999999999997 9999999999999761 10 12
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCC-chHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHH
Q 043160 181 EHITKGALMIAAGCFSWSCFIILEAFLLKSYPA-ELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGG 259 (333)
Q Consensus 181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 259 (333)
+....|+.+++.++++|+.+.+..|+..++.+. +.....+.+..+.+...+.....++ + ... +...|..+++.+
T Consensus 124 ~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~-~~~---~~~~~~~~~~~~ 198 (260)
T TIGR00950 124 SINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGP-N-PQA---LSLQWGALLYLG 198 (260)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCC-C-CCc---chHHHHHHHHHH
Confidence 334579999999999999999999998776542 3445557788888888888765432 1 111 335677788889
Q ss_pred HH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhh
Q 043160 260 FV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGL 319 (333)
Q Consensus 260 ~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~ 319 (333)
++ +.+++.++++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+
T Consensus 199 ~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 199 LIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 88 8999999999999999999999999999999999999999999999999999999986
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=1.3e-30 Score=233.41 Aligned_cols=289 Identities=13% Similarity=0.093 Sum_probs=225.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 043160 11 YLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNL 90 (333)
Q Consensus 11 ~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 90 (333)
.++.+...++-....+.+|.++++...|..+++.|+.++.+...+.. ....+++++.+++++++.+..|++. +.++.+
T Consensus 4 ~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~ 81 (302)
T TIGR00817 4 GLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSW-SSGLPKRLKISSALLKLLLPVAIVH-TIGHVT 81 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHH
Confidence 34455555666666788999975447799999999999877766542 1122334567789999999999998 899999
Q ss_pred HHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhcc
Q 043160 91 YFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHN 170 (333)
Q Consensus 91 ~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~ 170 (333)
.++++++++++.++++.++.|+++++++++++|||+++++ +++++++++|+.+.. +
T Consensus 82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~------~~~l~l~~~Gv~l~~---~--------------- 137 (302)
T TIGR00817 82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTL------WLSLLPIVGGVALAS---D--------------- 137 (302)
T ss_pred HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHhhhc---C---------------
Confidence 9999999999999999999999999999999999999997 999999999998753 1
Q ss_pred cCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhh--hCCCchHHHHHHHHHHHHHHHHHHHhhccCCccc--ee-
Q 043160 171 QSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLK--SYPAELSLTALMCFVSSVEGTILALAIERGNTGI--WL- 245 (333)
Q Consensus 171 ~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~- 245 (333)
.+. +....|+++++.++++|+++.+..||..+ +. ++.+.+.+++..+.+.+.|.....++.+... +.
T Consensus 138 ------~~~-~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~ 209 (302)
T TIGR00817 138 ------TEL-SFNWAGFLSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQ 209 (302)
T ss_pred ------Ccc-cccHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHH
Confidence 112 33457999999999999999999999877 44 5788999999999999999887655311111 00
Q ss_pred ----eccchhHHHHHHHHHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhh
Q 043160 246 ----LHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLY 320 (333)
Q Consensus 246 ----~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~ 320 (333)
......+......++. ....+.++++++++.++++.++..+++|+++++++++++||++++.+++|++++++|++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~ 289 (302)
T TIGR00817 210 AISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVF 289 (302)
T ss_pred hhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHH
Confidence 0000112112222222 22333466689999999999999999999999999999999999999999999999999
Q ss_pred hheecCCCCCCCC
Q 043160 321 MVLWGRSKDQSPS 333 (333)
Q Consensus 321 ~~~~~~~~~~~~~ 333 (333)
++.+.|+++++.|
T Consensus 290 l~~~~k~~~~~~~ 302 (302)
T TIGR00817 290 LYSRVKAQKPKPK 302 (302)
T ss_pred HHHHHhccCcCCC
Confidence 9998877666654
No 9
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.97 E-value=4.7e-28 Score=214.44 Aligned_cols=273 Identities=16% Similarity=0.205 Sum_probs=199.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHh-hcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 043160 11 YLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLE-RKTRPKMTFRIFAKIALLGLFEPVIGQN 89 (333)
Q Consensus 11 ~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 89 (333)
+++.++++++|+..++..|... ++-++ ..+++...+.+.+.++...+. ++.++..+++.+..... +.++...++.
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~-~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 78 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHA-DKEPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAI-SAVANMVYFL 78 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcC-CchhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHH-HHHHHHHHHH
Confidence 5788999999999999999763 43333 347777777777877765432 22333334444444444 4444489999
Q ss_pred HHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhc
Q 043160 90 LYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILH 169 (333)
Q Consensus 90 ~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~ 169 (333)
++++|+++.|++.++++.++.|+++.+++++++|||+++++ ++|+.++++|+.++.. ++
T Consensus 79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~------~~g~~~~~~Gv~ll~~---~~------------ 137 (281)
T TIGR03340 79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLA------WLGILIITLGLLVLGL---SR------------ 137 (281)
T ss_pred HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHHHHHhc---cc------------
Confidence 99999999999999999999999999999999999999998 9999999999998762 11
Q ss_pred ccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchH---HHHHHHHHHHHHHHHHHHhhccCCccceee
Q 043160 170 NQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELS---LTALMCFVSSVEGTILALAIERGNTGIWLL 246 (333)
Q Consensus 170 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (333)
.. .....|+.+++.++++|++|.+..|+..++.++... ...+.....++...+.....++ ....
T Consensus 138 --------~~-~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~- 204 (281)
T TIGR03340 138 --------FA-QHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHG---RSMF- 204 (281)
T ss_pred --------cc-ccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhc---cchh-
Confidence 11 112357788999999999999998876444332111 2222222221111221111111 1111
Q ss_pred ccchhHHHHHHHHHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhh
Q 043160 247 HFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYM 321 (333)
Q Consensus 247 ~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~ 321 (333)
.....+..+++.+.+ +.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|++++++|+++
T Consensus 205 ~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 205 PYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 122334555666777 999999999999999999999999999999999999999999999999999999999875
No 10
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.96 E-value=3.3e-27 Score=214.48 Aligned_cols=285 Identities=14% Similarity=0.135 Sum_probs=225.1
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC--CHHHHHHHHHHHHHH
Q 043160 7 HAKPYLGVIFMQFCSSIMSIITKIALTQGMS-QHVLVAYRMVVATSLIAPFAIVLERKTRPKM--TFRIFAKIALLGLFE 83 (333)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~-~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~ 83 (333)
+.+..++.+....+-......+|.++ +.++ |..++.+|++++.++...+... +.++.++. .+++++.++..|+++
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl-~~~~~P~~l~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~llp~gl~~ 124 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLAL-NMLPLPWTISSLQLFVGWLFALLYWAT-GFRKIPRIKSLKLFLKNFLPQGLCH 124 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH-HhCChhHHHHHHHHHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 45667777788888888899999997 5589 9999999999998876554322 22222333 345788999999999
Q ss_pred HHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCch
Q 043160 84 PVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWK 163 (333)
Q Consensus 84 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~ 163 (333)
...+...+.|+++++++.++++..+.|+++++++++++|||+++++ +++++++++|+.+...
T Consensus 125 -~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~------~l~l~l~v~Gv~l~~~----------- 186 (350)
T PTZ00343 125 -LFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYA------YLSLIPIVGGVALASV----------- 186 (350)
T ss_pred -HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHheec-----------
Confidence 5557777899999999999999999999999999999999999997 9999999999999762
Q ss_pred hhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC------CchHHHHHHHHHHHHHHHHHHHhhc
Q 043160 164 QVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYP------AELSLTALMCFVSSVEGTILALAIE 237 (333)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (333)
.+. +....|+++++.++++|+++++..|+..++.+ ++.+...+....+.++++|.....|
T Consensus 187 -------------~~~-~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e 252 (350)
T PTZ00343 187 -------------KEL-HFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFE 252 (350)
T ss_pred -------------ccc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 122 34567999999999999999999999887642 2444556667888888888886554
Q ss_pred cCC-cccee----eccchhHHHHHHHHHHHHHHHHHHHH----HHhhcCceeeeeccchhHHHHHHHHHHHhccccchhh
Q 043160 238 RGN-TGIWL----LHFDAKLLSVLYGGFVSCTAYFIMGW----LMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGR 308 (333)
Q Consensus 238 ~~~-~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~----a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~ 308 (333)
... ...+. ......+..+.+..+.+++++++++. ++++.++...++..+++|+++++++++++||++++.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~ 332 (350)
T PTZ00343 253 GKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLG 332 (350)
T ss_pred hHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHh
Confidence 311 11110 00111223344433338888888885 9999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhhhhheec
Q 043160 309 IVGAIVIVIGLYMVLWG 325 (333)
Q Consensus 309 ~~G~~li~~g~~~~~~~ 325 (333)
++|+++++.|++++..-
T Consensus 333 ~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 333 YLGMAVAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 99999999999998754
No 11
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.95 E-value=2.1e-26 Score=201.31 Aligned_cols=248 Identities=12% Similarity=0.127 Sum_probs=183.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC-----CCCCCHH-HHHHHHHHHHH
Q 043160 9 KPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKT-----RPKMTFR-IFAKIALLGLF 82 (333)
Q Consensus 9 ~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~-----~~~~~~~-~~~~~~~~g~~ 82 (333)
+|.+++++++++||.++++.|.. ++++|.+.+++|++++.+++.++...+++++ .++.+++ .+..+...|.+
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~--~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL--KPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 58899999999999999999985 4599999999999999988877654433211 1111222 24456677777
Q ss_pred HHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCc
Q 043160 83 EPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPW 162 (333)
Q Consensus 83 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~ 162 (333)
. ..++.++++|++++++++++++.++.|+++++++++++|||+++++ +++++++++|+.++...+
T Consensus 80 ~-~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~------~l~~~~~~~Gv~li~~~~-------- 144 (256)
T TIGR00688 80 I-GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQ------FIAVIIATLGVISNIVLK-------- 144 (256)
T ss_pred H-HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHc--------
Confidence 5 8999999999999999999999999999999999999999999997 999999999999876210
Q ss_pred hhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCcc
Q 043160 163 KQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTG 242 (333)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (333)
++ .. .+++.++++|+.|.+..|+..++ +........ ........+.....+. ..
T Consensus 145 ---------------~~-~~-----~~~l~aa~~~a~~~i~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~--~~ 198 (256)
T TIGR00688 145 ---------------GS-LP-----WEALVLAFSFTAYGLIRKALKNT--DLAGFCLET-LSLMPVAIYYLLQTDF--AT 198 (256)
T ss_pred ---------------CC-ch-----HHHHHHHHHHHHHHHHHhhcCCC--CcchHHHHH-HHHHHHHHHHHHHhcc--Cc
Confidence 11 11 35788999999999999886442 222211111 1111122111111111 11
Q ss_pred ceeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHH
Q 043160 243 IWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFF 299 (333)
Q Consensus 243 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~ 299 (333)
....++...|..+.+.|+++.++|.++++++++.++++++++.+++|+++.+++.+.
T Consensus 199 ~~~~~~~~~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 199 VQQTNPFPIWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred ccccCchhHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 111122246777888887788999999999999999999999999999999999764
No 12
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.95 E-value=1.7e-25 Score=198.40 Aligned_cols=297 Identities=14% Similarity=0.152 Sum_probs=229.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHH
Q 043160 8 AKPYLGVIFMQFCSSIMSIITKIALTQGMS-QHVLVAYRMVVATSLIAPFAIVLERK-TRPKMTFRIFAKIALLGLFEPV 85 (333)
Q Consensus 8 ~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~-~~~~~~~r~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~ 85 (333)
.+..++.=..+++-+.+...+...-+++.+ |....+..+..-.++..+...+++++ ++.+..++++++.++.+++. .
T Consensus 12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D-v 90 (334)
T PF06027_consen 12 WIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD-V 90 (334)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH-H
Confidence 345555555566777777777777445555 77777777777666666665554432 22333456678888899998 9
Q ss_pred HHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhh
Q 043160 86 IGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQV 165 (333)
Q Consensus 86 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~ 165 (333)
.++++.+.|++||+.+.++++.++..+++.+++++++|||.++.+ ++|+++++.|+.++...+...
T Consensus 91 ~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~------~~gv~i~i~Gv~lv~~sD~~~-------- 156 (334)
T PF06027_consen 91 EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFH------ILGVLICIAGVVLVVVSDVLS-------- 156 (334)
T ss_pred HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHH------HHHHHHHHhhhhheeeecccc--------
Confidence 999999999999999999999999999999999999999999997 999999999999987543210
Q ss_pred hhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCcccee
Q 043160 166 RILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWL 245 (333)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (333)
.+++.+. ++...|+++++.|+++||++++.+++..|+. +......+.-+++.++..+...+.|..+....+
T Consensus 157 -------~~~~~~~-~~~i~GDll~l~~a~lya~~nV~~E~~v~~~-~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~ 227 (334)
T PF06027_consen 157 -------GSDSSSG-SNPILGDLLALLGAILYAVSNVLEEKLVKKA-PRVEFLGMLGLFGFIISGIQLAILERSGIESIH 227 (334)
T ss_pred -------cccCCCC-CccchhHHHHHHHHHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHheehhhhhccC
Confidence 0011244 5678999999999999999999999999987 456677777888888888888777763444433
Q ss_pred eccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheec
Q 043160 246 LHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWG 325 (333)
Q Consensus 246 ~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~ 325 (333)
.++ .....++.-+++.+.-|.+....++..+|+..++-..+..+++++++++++|+++++..++|.++|+.|.+++...
T Consensus 228 w~~-~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~ 306 (334)
T PF06027_consen 228 WTS-QVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA 306 (334)
T ss_pred CCh-hhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence 332 2222222223336667778888999999999999999999999999999999999999999999999999999865
Q ss_pred CCCC
Q 043160 326 RSKD 329 (333)
Q Consensus 326 ~~~~ 329 (333)
++++
T Consensus 307 ~~~~ 310 (334)
T PF06027_consen 307 ESPE 310 (334)
T ss_pred CCcc
Confidence 5443
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.94 E-value=5.1e-24 Score=189.52 Aligned_cols=283 Identities=21% Similarity=0.307 Sum_probs=216.1
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHH
Q 043160 4 QYHHAKPYLGVIFMQFCSSIMSIITKIALTQG-MSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLF 82 (333)
Q Consensus 4 ~~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~-~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 82 (333)
+++...+..+.++.++.|+......|... ++ .++....+.|...+.+...+... +++....+ ..+.+++..+.+.+
T Consensus 2 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~ 78 (292)
T COG0697 2 KRALLLGLLALLLWGLLWGLSFIALKLAV-ESLDPFLFAAALRFLIAALLLLPLLL-LEPRGLRP-ALRPWLLLLLLALL 78 (292)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHh-cccCChHHHHHHHHHHHHHHHHHHHH-hhcccccc-cccchHHHHHHHHH
Confidence 45566788889999999999999999994 54 67777777799988888443321 11111111 11224556666777
Q ss_pred HHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHH-HHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCC
Q 043160 83 EPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAW-IFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFP 161 (333)
Q Consensus 83 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~-~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~ 161 (333)
....++.+++.++++++++.++++.++.|+++.+++. +++|||+++++ +.++++.+.|+.++.. ++..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~------~~~~~~~~~Gv~lv~~---~~~~-- 147 (292)
T COG0697 79 GLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQ------ILGILLALAGVLLILL---GGGG-- 147 (292)
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHheec---CCCc--
Confidence 7699999999999999999999999999999999997 77799999997 9999999999999872 1100
Q ss_pred chhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHH-HHHHHHHHHHHHHHHhhccCC
Q 043160 162 WKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTA-LMCFVSSVEGTILALAIERGN 240 (333)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 240 (333)
... . ...|+.+++.++++|+++.+..|+.. +. ++..... +..........+.. ...
T Consensus 148 ---------------~~~-~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~--~~~-- 204 (292)
T COG0697 148 ---------------GGI-L-SLLGLLLALAAALLWALYTALVKRLS-RL-GPVTLALLLQLLLALLLLLLFF--LSG-- 204 (292)
T ss_pred ---------------chh-H-HHHHHHHHHHHHHHHHHHHHHHHHhc-CC-ChHHHHHHHHHHHHHHHHHHHH--hcc--
Confidence 011 1 46899999999999999999999877 33 3344444 33331112222222 111
Q ss_pred ccceeeccchhHHHHHHHHHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhh
Q 043160 241 TGIWLLHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGL 319 (333)
Q Consensus 241 ~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~ 319 (333)
.. .......+..+.+.|++ +.+++.++++++++.+++..+.+.+++|+++.+++++++||+++..+++|+++++.|+
T Consensus 205 ~~--~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~ 282 (292)
T COG0697 205 FG--APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGV 282 (292)
T ss_pred cc--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHH
Confidence 11 11223567888888999 7789999999999999999999999999999999999999999999999999999999
Q ss_pred hhheec
Q 043160 320 YMVLWG 325 (333)
Q Consensus 320 ~~~~~~ 325 (333)
.+...+
T Consensus 283 ~l~~~~ 288 (292)
T COG0697 283 LLASLR 288 (292)
T ss_pred HHHhcc
Confidence 998877
No 14
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.94 E-value=1.7e-24 Score=182.78 Aligned_cols=281 Identities=14% Similarity=0.144 Sum_probs=228.4
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCC--C-CCCHHHHHHHHHHH
Q 043160 4 QYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTR--P-KMTFRIFAKIALLG 80 (333)
Q Consensus 4 ~~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~--~-~~~~~~~~~~~~~g 80 (333)
+++..+|++..+.+.++||..+...|.. ++.++.++...|...+.+++..+....++++. . ..+++.+....+.+
T Consensus 2 ~~~~~~Gil~~l~Ay~lwG~lp~y~kll--~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a 79 (293)
T COG2962 2 AKDSRKGILLALLAYLLWGLLPLYFKLL--EPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTA 79 (293)
T ss_pred CCcccchhHHHHHHHHHHHHHHHHHHHH--ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHH
Confidence 3566799999999999999999999999 67999999999999999999887766544321 1 12345566667777
Q ss_pred HHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccC
Q 043160 81 LFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEF 160 (333)
Q Consensus 81 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~ 160 (333)
.+. ..++..|.+|.++..+-++++-.+..|++.++++.+++|||+|+.| +++++++.+||...+...|.
T Consensus 80 ~li-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q------~iAV~lA~~GV~~~~~~~g~---- 148 (293)
T COG2962 80 LLI-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQ------WIAVGLAAAGVLIQTWLLGS---- 148 (293)
T ss_pred HHH-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHcCC----
Confidence 776 9999999999999999999999999999999999999999999997 99999999999998864431
Q ss_pred CchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCC
Q 043160 161 PWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGN 240 (333)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (333)
-+ ..++.-+++|+.|....|+ .+- |+.+.....+..-........+..++ +
T Consensus 149 -----------------lp--------wval~la~sf~~Ygl~RK~-~~v--~a~~g~~lE~l~l~p~al~yl~~l~~-~ 199 (293)
T COG2962 149 -----------------LP--------WVALALALSFGLYGLLRKK-LKV--DALTGLTLETLLLLPVALIYLLFLAD-S 199 (293)
T ss_pred -----------------Cc--------HHHHHHHHHHHHHHHHHHh-cCC--chHHhHHHHHHHHhHHHHHHHHHHhc-C
Confidence 11 3455668899999987554 332 44666666666666666666655554 2
Q ss_pred ccceeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhh
Q 043160 241 TGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLY 320 (333)
Q Consensus 241 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~ 320 (333)
...........+..+...|.++.++..++..+.|+.+-+..+.++|++|..-.+++.+++||+++..+++..++|.+|+.
T Consensus 200 ~~~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~ 279 (293)
T COG2962 200 GQFLQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALA 279 (293)
T ss_pred chhhhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence 21112123456777888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hheecC
Q 043160 321 MVLWGR 326 (333)
Q Consensus 321 ~~~~~~ 326 (333)
++..+.
T Consensus 280 l~~~d~ 285 (293)
T COG2962 280 LFSIDG 285 (293)
T ss_pred HHHHHH
Confidence 887654
No 15
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.92 E-value=1.2e-22 Score=167.14 Aligned_cols=275 Identities=12% Similarity=0.072 Sum_probs=223.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 043160 10 PYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQN 89 (333)
Q Consensus 10 ~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 89 (333)
+++.++.++..--....+.|..+ ..+++...+.+|..++.++++.+... ++ .+..+++++.+...|+.. ...|.
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LF-P~vG~~g~t~lRl~~aaLIll~l~RP--wr--~r~~~~~~~~~~~yGvsL-g~MNl 86 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLF-PLVGAAGVTALRLAIAALILLALFRP--WR--RRLSKPQRLALLAYGVSL-GGMNL 86 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHc-cccChhhHHHHHHHHHHHHHHHHhhH--HH--hccChhhhHHHHHHHHHH-HHHHH
Confidence 57888888887778888889886 66999999999999999999976522 22 456678899999999998 99999
Q ss_pred HHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhc
Q 043160 90 LYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILH 169 (333)
Q Consensus 90 ~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~ 169 (333)
+||.++++.|.+.+..+.++.|+.+++++.-- .++ .+-+.+++.|+.++.-.+
T Consensus 87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~sRr------~~d------~vwvaLAvlGi~lL~p~~--------------- 139 (292)
T COG5006 87 LFYLSIERIPLGIAVAIEFTGPLAVALLSSRR------LRD------FVWVALAVLGIWLLLPLG--------------- 139 (292)
T ss_pred HHHHHHHhccchhhhhhhhccHHHHHHHhccc------hhh------HHHHHHHHHHHHhheecc---------------
Confidence 99999999999999999999999988776522 244 777788889999876111
Q ss_pred ccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccc
Q 043160 170 NQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFD 249 (333)
Q Consensus 170 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (333)
++.. +-+..|..+++.++.||+.|.+..+|..+.. +.-+....-+..+.+...|+.....+ ..- .+.
T Consensus 140 ------~~~~-~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~-~g~~g~a~gm~vAaviv~Pig~~~ag--~~l---~~p 206 (292)
T COG5006 140 ------QSVW-SLDPVGVALALGAGACWALYIVLGQRAGRAE-HGTAGVAVGMLVAALIVLPIGAAQAG--PAL---FSP 206 (292)
T ss_pred ------CCcC-cCCHHHHHHHHHHhHHHHHHHHHcchhcccC-CCchHHHHHHHHHHHHHhhhhhhhcc--hhh---cCh
Confidence 1123 5567999999999999999999999876544 34667788888999999999974332 211 122
Q ss_pred hhHHHHHHHHHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCCC
Q 043160 250 AKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRSK 328 (333)
Q Consensus 250 ~~~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~ 328 (333)
+....-+..+++ +.+.|.+-..++++.+...-+.+.++||.++.+.+++++||++|+.||.|+++|+.+..-..+..||
T Consensus 207 ~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~ 286 (292)
T COG5006 207 SLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARK 286 (292)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCC
Confidence 344555567888 9999999999999999999999999999999999999999999999999999999988876665554
Q ss_pred CC
Q 043160 329 DQ 330 (333)
Q Consensus 329 ~~ 330 (333)
+.
T Consensus 287 ~~ 288 (292)
T COG5006 287 PA 288 (292)
T ss_pred CC
Confidence 43
No 16
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.91 E-value=5.7e-26 Score=187.84 Aligned_cols=293 Identities=17% Similarity=0.146 Sum_probs=222.4
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHH
Q 043160 6 HHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPV 85 (333)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 85 (333)
+..+|.++..++.+.-..+.+..|.. +.+|.+....|+++-+++..|..+++....+ -+.....+++++|..+ .
T Consensus 35 ~p~~gl~l~~vs~ff~~~~vv~t~~~---e~~p~e~a~~r~l~~mlit~pcliy~~~~v~--gp~g~R~~LiLRg~mG-~ 108 (346)
T KOG4510|consen 35 KPNLGLLLLTVSYFFNSCMVVSTKVL---ENDPMELASFRLLVRMLITYPCLIYYMQPVI--GPEGKRKWLILRGFMG-F 108 (346)
T ss_pred CCccCceehhhHHHHhhHHHhhhhhh---ccChhHhhhhhhhhehhhhheEEEEEeeeee--cCCCcEEEEEeehhhh-h
Confidence 45677888888866666666666644 3889999999988888887776655444331 1223456788999999 8
Q ss_pred HHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhh
Q 043160 86 IGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQV 165 (333)
Q Consensus 86 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~ 165 (333)
.+..+.|||++|.+.+.++++.+.+|.+|.+++|+++|||.+..+ .++..+.+.||++++ .|.-.++.+ +
T Consensus 109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~e------aL~s~itl~GVVLIv---RPpFlFG~~-t 178 (346)
T KOG4510|consen 109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFE------ALGSLITLLGVVLIV---RPPFLFGDT-T 178 (346)
T ss_pred hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHH------HHHHHHhhheEEEEe---cCCcccCCC-c
Confidence 899999999999999999999999999999999999999999998 999999999999998 565443322 1
Q ss_pred hhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCcccee
Q 043160 166 RILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWL 245 (333)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (333)
+.++ + +.. +....|...++.+++.-|...++.|+.-|+.+.-+....+. ..+.+......... ..+.
T Consensus 179 ~g~~-----~-s~~-~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~-~i~lV~s~I~~~~i-----g~~~ 245 (346)
T KOG4510|consen 179 EGED-----S-SQV-EYDIPGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFS-LITLVVSLIGCASI-----GAVQ 245 (346)
T ss_pred cccc-----c-ccc-cccCCchHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHH-HHHHHHHHHHHhhc-----ccee
Confidence 1111 1 112 34456778888888888888888888778775434333333 33434333333221 1333
Q ss_pred ecc-chhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160 246 LHF-DAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW 324 (333)
Q Consensus 246 ~~~-~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~ 324 (333)
+|. ..+|+.++.+|+++++++.+...++|+..+..++++.+...+++.+++.++|||.||++.+.|+++++.+.++...
T Consensus 246 lP~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~ 325 (346)
T KOG4510|consen 246 LPHCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVAL 325 (346)
T ss_pred cCccccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHH
Confidence 332 3567777888999999999999999999999999999999999999999999999999999999999999877765
Q ss_pred cCC
Q 043160 325 GRS 327 (333)
Q Consensus 325 ~~~ 327 (333)
.|.
T Consensus 326 ~kw 328 (346)
T KOG4510|consen 326 KKW 328 (346)
T ss_pred HHH
Confidence 543
No 17
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.89 E-value=5e-21 Score=169.70 Aligned_cols=279 Identities=15% Similarity=0.151 Sum_probs=204.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 043160 10 PYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQN 89 (333)
Q Consensus 10 ~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 89 (333)
+++++++++++||...+..|.. . +.++.+.. |..++.+++..+....+.. ++..++.+..-++.|... ..++.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~-~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~--~~~~~~~~~~g~l~G~~w-~ig~~ 74 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKI-G-GGPYSQTL--GTTFGALILSIAIAIFVLP--EFWALSIFLVGLLSGAFW-ALGQI 74 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhcc-C-CCHHHHHH--HHHHHHHHHHHHHHHHhCC--cccccHHHHHHHHHHHHH-Hhhhh
Confidence 5788999999999999999998 4 78887775 6777777666554443321 122244455566666665 99999
Q ss_pred HHHHHhcccchhhHHHhhc-hHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhh
Q 043160 90 LYFTGLKCSTATFTVAMCN-ILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRIL 168 (333)
Q Consensus 90 ~~~~al~~~~~~~~~~l~~-~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~ 168 (333)
+++.+.++++.+.+.++.+ +.+++..+.+.+++||+.++++ ....++|++++++|+.++...++++.
T Consensus 75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~--~~~~~~g~~l~l~G~~l~~~~~~~~~---------- 142 (290)
T TIGR00776 75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQ--TLLGLLALILIIIGVYLTSRSKDKSA---------- 142 (290)
T ss_pred hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHH--HHHHHHHHHHHHHhHheEEecccccc----------
Confidence 9999999999999999987 8999999999999999998762 11127889999999888752111000
Q ss_pred cccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHH---HHHHHHHHHHHhhccCCcccee
Q 043160 169 HNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCF---VSSVEGTILALAIERGNTGIWL 245 (333)
Q Consensus 169 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 245 (333)
++.+. .+...|..+++.++++|+.|.+..|+. ++ +|.+..+.+.. .++....+... + . .++
T Consensus 143 ------~~~~~-~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~~~~~~---~-~-~~~- 206 (290)
T TIGR00776 143 ------GIKSE-FNFKKGILLLLMSTIGYLVYVVVAKAF--GV-DGLSVLLPQAIGMVIGGIIFNLGHI---L-A-KPL- 206 (290)
T ss_pred ------ccccc-cchhhHHHHHHHHHHHHHHHHHHHHHc--CC-CcceehhHHHHHHHHHHHHHHHHHh---c-c-cch-
Confidence 00011 223579999999999999999998875 23 56666444333 33332222221 1 1 111
Q ss_pred eccchhHHHHHHHHHHHHHHHHHHHHHHh-hcCceeeeeccchhHHHHHHHHHHHhccccchhhh----HHHHHHHhhhh
Q 043160 246 LHFDAKLLSVLYGGFVSCTAYFIMGWLMK-RKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRI----VGAIVIVIGLY 320 (333)
Q Consensus 246 ~~~~~~~~~l~~~~~~~~~~~~~~~~a~~-~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~----~G~~li~~g~~ 320 (333)
.....+..++ .|++..+++.+|..+.+ +.+++..+.+.+.+|+.+.+++++++||+.++.++ +|+++++.|+.
T Consensus 207 -~~~~~~~~~~-~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~ 284 (290)
T TIGR00776 207 -KKYAILLNIL-PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAAN 284 (290)
T ss_pred -HHHHHHHHHH-HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHH
Confidence 2223344444 78889999999999999 99999999999999999999999999999999999 99999999988
Q ss_pred hheec
Q 043160 321 MVLWG 325 (333)
Q Consensus 321 ~~~~~ 325 (333)
+....
T Consensus 285 l~~~~ 289 (290)
T TIGR00776 285 ILGIG 289 (290)
T ss_pred HHhcc
Confidence 87543
No 18
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.86 E-value=2e-19 Score=160.82 Aligned_cols=269 Identities=13% Similarity=0.140 Sum_probs=212.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHH
Q 043160 37 SQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFL 116 (333)
Q Consensus 37 ~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~l 116 (333)
.|..+++.++....+...+.....+ .++.++..++.....+.+. .++..+.+.|+++.|.+...++.+..|+.+++
T Consensus 31 ~~~~lt~~q~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi 106 (303)
T PF08449_consen 31 FPLFLTFVQFAFNALFSFILLSLFK---FPKSRKIPLKKYAILSFLF-FLASVLSNAALKYISYPTQIVFKSSKPIPVMI 106 (303)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcc---ccCCCcChHHHHHHHHHHH-HHHHHHHHHHHHhCChHHHHHHhhhHHHHHHH
Confidence 3888889999888877776554333 1233445566778888888 88999999999999999999999999999999
Q ss_pred HHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHH
Q 043160 117 MAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFS 196 (333)
Q Consensus 117 l~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~ 196 (333)
++.+++|+|.++++ +.++++..+|+.+....+..+. ++++... .....|+.+.+.+.++
T Consensus 107 ~~~l~~~k~y~~~~------~~~v~li~~Gv~~~~~~~~~~~--------------~~~~~~~-~~~~~G~~ll~~sl~~ 165 (303)
T PF08449_consen 107 LGVLILGKRYSRRQ------YLSVLLITIGVAIFTLSDSSSS--------------SSSNSSS-FSSALGIILLLLSLLL 165 (303)
T ss_pred HHHHhcCccccHHH------HHHHHHHHhhHheeeecccccc--------------ccccccc-ccchhHHHHHHHHHHH
Confidence 99999999999997 9999999999999875432211 1111122 2233599999999999
Q ss_pred HHHHHHHHHHHhhhCC-CchHHHHHHHHHHHHHHHHHHHhhc-cCCccce--eeccchhHHHHHHHHHHHHHHHHHHHHH
Q 043160 197 WSCFIILEAFLLKSYP-AELSLTALMCFVSSVEGTILALAIE-RGNTGIW--LLHFDAKLLSVLYGGFVSCTAYFIMGWL 272 (333)
Q Consensus 197 ~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~a 272 (333)
.|...+.+++..++++ ++....++....+.+...+.....+ +...... ....+..+..++...+.+.++..+.++.
T Consensus 166 ~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~ 245 (303)
T PF08449_consen 166 DAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYL 245 (303)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998876 4678889999998888777776521 1011111 1122234555556566688888999999
Q ss_pred HhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCCCCC
Q 043160 273 MKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRSKDQ 330 (333)
Q Consensus 273 ~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~~ 330 (333)
.++.++...++...++.+++++++++++|+++++.+++|.++++.|..+....++|++
T Consensus 246 ~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~ 303 (303)
T PF08449_consen 246 IKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN 303 (303)
T ss_pred HHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence 9999999999999999999999999999999999999999999999999998876653
No 19
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.85 E-value=2.9e-20 Score=161.36 Aligned_cols=232 Identities=11% Similarity=0.137 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160 73 FAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL 152 (333)
Q Consensus 73 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 152 (333)
.+..+....+. .++++.+..|+++++++...++.+++.+||..++.++.+||+|..+ ++++.+++.|+++++.
T Consensus 159 ak~sl~fc~lW-F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sK------llav~~si~GViiVt~ 231 (416)
T KOG2765|consen 159 AKLSLFFCPLW-FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSK------LLAVFVSIAGVIIVTM 231 (416)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHH------HHHHHHhhccEEEEEe
Confidence 34455666666 8899999999999999999999999999999999999999999996 9999999999999985
Q ss_pred hcCCcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchH---HHHHHHHHHHHHH
Q 043160 153 LKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELS---LTALMCFVSSVEG 229 (333)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 229 (333)
++... +++... ++...|+++++++|+.||+|.++.|+...++++.+. ...+.-++..+.+
T Consensus 232 ~~s~~----------------~~~~~a-~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllll 294 (416)
T KOG2765|consen 232 GDSKQ----------------NSDLPA-SRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLL 294 (416)
T ss_pred ccccc----------------cccCCc-cchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHH
Confidence 43211 112345 667899999999999999999999988777642222 2223344455667
Q ss_pred HHHHHhhccCCccceeeccchhHHHHHHHHHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhh
Q 043160 230 TILALAIERGNTGIWLLHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGR 308 (333)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~ 308 (333)
.|..++........++.|+..+...+++.+++ ++++-++|.+|.-..++..+++-..++.+.+++.+.++-|.++++.+
T Consensus 295 wP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~ 374 (416)
T KOG2765|consen 295 WPPLIILDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALY 374 (416)
T ss_pred hHHHHHHHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHH
Confidence 76666665444556677777778888888988 99999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhhhhheecCCC
Q 043160 309 IVGAIVIVIGLYMVLWGRSK 328 (333)
Q Consensus 309 ~~G~~li~~g~~~~~~~~~~ 328 (333)
++|...|++|-+.++...+.
T Consensus 375 iiGsi~Ifv~Fv~vn~~~~~ 394 (416)
T KOG2765|consen 375 IIGSIPIFVGFVIVNISSEN 394 (416)
T ss_pred HHHHHHHHHHHhheeccccc
Confidence 99999999998888865543
No 20
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.78 E-value=4.5e-19 Score=155.48 Aligned_cols=287 Identities=12% Similarity=0.097 Sum_probs=227.0
Q ss_pred HHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 043160 14 VIFMQFCSSIMSIITKIALT--QGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLY 91 (333)
Q Consensus 14 ~~~~~~~~~~~~~~~k~~l~--~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 91 (333)
.....++-.......|+.++ +.--|..++..+...+.+........+..+..+..++..+..++..|+.. .++..+-
T Consensus 22 ~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~~~v~~ 100 (316)
T KOG1441|consen 22 FAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CISHVLG 100 (316)
T ss_pred HHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HHHHHhc
Confidence 33344444445667888876 44457888888777777777665544444443333556788899999999 9999999
Q ss_pred HHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhccc
Q 043160 92 FTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQ 171 (333)
Q Consensus 92 ~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~ 171 (333)
+.++.+.+++.++.+..+.|++++++++++.+|+.+... +..++....|+.+.+.
T Consensus 101 n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~------~lsL~piv~GV~ias~------------------- 155 (316)
T KOG1441|consen 101 NVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMT------YLSLLPIVFGVAIASV------------------- 155 (316)
T ss_pred chhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceE------EEEEEEeeeeEEEeee-------------------
Confidence 999999999999999999999999999999999999998 8999999999999763
Q ss_pred CCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh--CC-CchHHHHHHHHHHHHHHH-HHHHhhccCCccc--ee
Q 043160 172 SETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKS--YP-AELSLTALMCFVSSVEGT-ILALAIERGNTGI--WL 245 (333)
Q Consensus 172 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~ 245 (333)
.+. +.+..|.+.++.+.+..+..+++.++..++ ++ ++++...++.-.+.+.++ |.....++ +... ..
T Consensus 156 -----~e~-~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~-~~~~~~~~ 228 (316)
T KOG1441|consen 156 -----TEL-SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEG-NKFVGFLT 228 (316)
T ss_pred -----ccc-cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcc-cceeeeec
Confidence 133 567799999999999999999999999853 32 678899999989988888 87766554 2220 00
Q ss_pred eccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheec
Q 043160 246 LHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWG 325 (333)
Q Consensus 246 ~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~ 325 (333)
.++........+..++...-+...+..+.+.+|...++.+...-++.++.++++|+|+.|+.+..|+++.++|++++.+.
T Consensus 229 ~~~~~~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~ 308 (316)
T KOG1441|consen 229 APWFVTFLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRA 308 (316)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHH
Confidence 01112233333444446667777888999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCC
Q 043160 326 RSKDQSPS 333 (333)
Q Consensus 326 ~~~~~~~~ 333 (333)
|+++++++
T Consensus 309 k~~~~~~~ 316 (316)
T KOG1441|consen 309 KLKEKKGK 316 (316)
T ss_pred hhhhhccC
Confidence 88777654
No 21
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.74 E-value=1.1e-17 Score=123.67 Aligned_cols=135 Identities=19% Similarity=0.281 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHH
Q 043160 9 KPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRP-KMTFRIFAKIALLGLFEPVIG 87 (333)
Q Consensus 9 ~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~ 87 (333)
...++++++++.+|...++.|..+ +++||...++.|..+...++..++...++.+.+ ..+.+.|..+.+.|+.+ +++
T Consensus 3 ~~~~~ALLsA~fa~L~~iF~KIGl-~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-gls 80 (140)
T COG2510 3 AAIIYALLSALFAGLTPIFAKIGL-EGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLS 80 (140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhc-cccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHH
Confidence 568899999999999999999995 889999999999999999999888776665433 34667788888888777 999
Q ss_pred HHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160 88 QNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT 151 (333)
Q Consensus 88 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 151 (333)
+.+||+|++..+++.+.++-.++|+++++++++++|||+|..+ ++|+.++.+|++++.
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~------~iG~~LI~~Gailvs 138 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPT------WIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHH------HHHHHHHHhCeeeEe
Confidence 9999999999999999999999999999999999999999998 999999999998764
No 22
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.67 E-value=4.6e-15 Score=127.55 Aligned_cols=230 Identities=13% Similarity=0.114 Sum_probs=167.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHH
Q 043160 69 TFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAM 148 (333)
Q Consensus 69 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ 148 (333)
++++..+..+.+++. ...+.+.++++++.+++..+++.++..++|++++++++|+|++++| |.++.+.++|+.
T Consensus 13 ~~~~~~~~~vPA~lY-~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~q------W~aL~lL~~Gv~ 85 (244)
T PF04142_consen 13 SPKDTLKLAVPALLY-AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQ------WLALFLLVAGVV 85 (244)
T ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhh------HHHHHHHHHHHh
Confidence 356778888888887 9999999999999999999999999999999999999999999997 999999999999
Q ss_pred HHHHhcCCcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHH-HHHHHHH
Q 043160 149 CMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTAL-MCFVSSV 227 (333)
Q Consensus 149 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~ 227 (333)
++.....+... .++..+...+... .+...|.++.+.++++.++..++.+|.+|+.+.+...... ....+.+
T Consensus 86 lv~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~ 157 (244)
T PF04142_consen 86 LVQLSSSQSSD-------NSSSSSVHHDASN-QNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGIL 157 (244)
T ss_pred eeecCCccccc-------ccccccccccccc-chhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHH
Confidence 97643221100 0000000011234 5678999999999999999999999999997644433333 3444444
Q ss_pred HHHHHHHhhccCCccceeeccchhHHHHHHHHHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccch
Q 043160 228 EGTILALAIERGNTGIWLLHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFL 306 (333)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~ 306 (333)
+..+.....++.+..+... ...+-...+.-++ ..++=.+....+|+.+...=+.....+.+++.+.++.+||.+++.
T Consensus 158 ~~~~~~~~~~~~~~~~~g~--f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~ 235 (244)
T PF04142_consen 158 FNLLALLLSDGSAISESGF--FHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSL 235 (244)
T ss_pred HHHHHHhcccccccccCCc--hhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 4444433322211111111 1222223333444 666667778889999999999999999999999999999999999
Q ss_pred hhhHHHHHH
Q 043160 307 GRIVGAIVI 315 (333)
Q Consensus 307 ~~~~G~~li 315 (333)
...+|+.++
T Consensus 236 ~f~lg~~~V 244 (244)
T PF04142_consen 236 SFLLGAALV 244 (244)
T ss_pred HHhhheecC
Confidence 999998753
No 23
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.66 E-value=2.5e-13 Score=118.67 Aligned_cols=299 Identities=12% Similarity=0.155 Sum_probs=213.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCC------CCHHHHHH
Q 043160 9 KPYLGVIFMQFCSSIMSIITKIALTQG---MSQHVLVAYRMVVATSLIAPFAIVLERK----TRPK------MTFRIFAK 75 (333)
Q Consensus 9 ~~~l~~~~~~~~~~~~~~~~k~~l~~~---~~~~~~~~~r~~~~~~~l~~~~~~~~~~----~~~~------~~~~~~~~ 75 (333)
.-.+.++...+.++......|+.-.++ +.|....+.-..+-.++....++...|+ ..+. ..+++...
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 456677778888999999999985344 6677777777777766666665544321 1111 23445666
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcC
Q 043160 76 IALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKG 155 (333)
Q Consensus 76 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~ 155 (333)
..+-+++. .+.+.++|.++.+.+++..++..++..+.|++++.+++++|++++| |.++++.++|+.++.....
T Consensus 95 ~~vPa~iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Q------w~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 95 VSVPALIY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQ------WMALVLLFAGVALVQLPSL 167 (345)
T ss_pred HHHHHHHH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHH------HHHHHHHHHHHHHHhccCC
Confidence 77777887 8888899999999999999999999999999999999999999997 9999999999999863211
Q ss_pred CcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHh
Q 043160 156 PILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALA 235 (333)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (333)
+. ++ +.+.... ++...|....+.++...++..++.+|.+|+.+.+......++.+-++.+......
T Consensus 168 ~~-------~~------a~~~~~~-~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~ 233 (345)
T KOG2234|consen 168 SP-------TG------AKSESSA-QNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTIL 233 (345)
T ss_pred CC-------CC------ccCCCcc-cchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 10 00 0112344 6778999999999999999999999999887655545555444444444444433
Q ss_pred hccCCccceeeccchhHHHHHHHHHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHH
Q 043160 236 IERGNTGIWLLHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIV 314 (333)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~l 314 (333)
..+.+...+ ......|-.....-++ ...+=.+...-+|+.+-..-.....+..+++.+.++.++|-+||....+|..+
T Consensus 234 ~~d~~~i~~-~gff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~l 312 (345)
T KOG2234|consen 234 LQDGEAINE-YGFFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALL 312 (345)
T ss_pred hcccccccc-CCccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHH
Confidence 332121111 1111223333333334 55555555666677777666667778999999999999999999999999999
Q ss_pred HHhhhhhheecCCCC
Q 043160 315 IVIGLYMVLWGRSKD 329 (333)
Q Consensus 315 i~~g~~~~~~~~~~~ 329 (333)
++.++.++...++++
T Consensus 313 Vi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 313 VILSIFLYSLYPARD 327 (345)
T ss_pred HHHHHHHhhcCCccc
Confidence 999999999666543
No 24
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.65 E-value=6.2e-15 Score=109.14 Aligned_cols=136 Identities=17% Similarity=0.136 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHHHHHH
Q 043160 186 GALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTA 265 (333)
Q Consensus 186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 265 (333)
...+++++++++++..++.|-.+++. ||...+..+.....+.+........+ .......+...|..++..|+.++.+
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~--~~~~~~~~~k~~lflilSGla~gls 80 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGN--WQAGGEIGPKSWLFLILSGLAGGLS 80 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCc--eecccccCcceehhhhHHHHHHHHH
Confidence 35789999999999999999988887 67888889988888888777765432 3332233557899999989779999
Q ss_pred HHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160 266 YFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW 324 (333)
Q Consensus 266 ~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~ 324 (333)
..+|++|++..+++.+.++..++|+++.+++++++||++|..+++|+.+|++|+++...
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999999999999999999999999999999999999999887654
No 25
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.63 E-value=3.8e-13 Score=115.87 Aligned_cols=290 Identities=13% Similarity=0.089 Sum_probs=220.5
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH--HHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 043160 6 HHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVA--YRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFE 83 (333)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~--~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 83 (333)
+..++....+.-.+.-..+.+..|..+.+.--|..+.. ++.+.+.+.+...-..+. -+.++++++..+.++...++.
T Consensus 9 ~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~l-v~~~~l~~~~~kk~~P~~~lf 87 (314)
T KOG1444|consen 9 KQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGL-VNFRPLDLRTAKKWFPVSLLF 87 (314)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhce-eecCCcChHHHHHHccHHHHH
Confidence 34455666666667777788899999755333444443 777766666654432222 224667888899999999998
Q ss_pred HHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCch
Q 043160 84 PVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWK 163 (333)
Q Consensus 84 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~ 163 (333)
.+....--.++++.++....++.+..|+++++....++|.|++.+. +.++...++|......
T Consensus 88 -~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v------~~Sv~~m~~~s~~~~~----------- 149 (314)
T KOG1444|consen 88 -VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKV------WASVFAMIIGSVAAAF----------- 149 (314)
T ss_pred -HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhH------HHHHHHHHHHHHhhcc-----------
Confidence 8888888999999999999999999999999999999998888886 8888888888877652
Q ss_pred hhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-CchHHHHHHHHHHHHHHHHHHHhhccCCcc
Q 043160 164 QVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYP-AELSLTALMCFVSSVEGTILALAIERGNTG 242 (333)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (333)
.+. .....|..+++...+.-+.+.+..|+..+..+ +.....++..+.+.........+.++.+..
T Consensus 150 -------------~d~-sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l 215 (314)
T KOG1444|consen 150 -------------TDL-SFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDAL 215 (314)
T ss_pred -------------ccc-eecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHH
Confidence 122 33445899999999999999999998776654 346678888888888777777665532200
Q ss_pred cee---eccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhh
Q 043160 243 IWL---LHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGL 319 (333)
Q Consensus 243 ~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~ 319 (333)
..+ ......+..+...+++++.-.++-.++.+..+++..++.+..+...+.+...++.|++.++...+|..+-++|.
T Consensus 216 ~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~gg 295 (314)
T KOG1444|consen 216 SLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGG 295 (314)
T ss_pred HhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhh
Confidence 111 12224456666666668888889999999999999999998888888888888889999999999999999998
Q ss_pred hhheecCCC
Q 043160 320 YMVLWGRSK 328 (333)
Q Consensus 320 ~~~~~~~~~ 328 (333)
+++...+.+
T Consensus 296 v~Y~~~~~~ 304 (314)
T KOG1444|consen 296 VLYSYATFR 304 (314)
T ss_pred hHHhhhhhh
Confidence 888866533
No 26
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.60 E-value=7e-15 Score=113.85 Aligned_cols=125 Identities=23% Similarity=0.426 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 043160 19 FCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCS 98 (333)
Q Consensus 19 ~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~ 98 (333)
++||...++.|... ++.||....++|+..+.+ +.++....+++..+..+++++......+.++...++.+++++++++
T Consensus 1 ~~~a~~~~~~k~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 78 (126)
T PF00892_consen 1 FSWAIYSVFSKKLL-KKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI 78 (126)
T ss_pred ceeeeHHHHHHHHh-ccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence 46999999999994 669999999999999998 6666666665544666778888889999987799999999999999
Q ss_pred chhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160 99 TATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT 151 (333)
Q Consensus 99 ~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 151 (333)
+++.++++.++.|+++.+++++++||++++++ ++|+++++.|+.++.
T Consensus 79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~------~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQ------IIGIILIIIGVVLIS 125 (126)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999997 999999999999875
No 27
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.55 E-value=2.1e-15 Score=124.65 Aligned_cols=271 Identities=13% Similarity=0.180 Sum_probs=199.4
Q ss_pred HHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 043160 22 SIMSIITKIALTQGM-SQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTA 100 (333)
Q Consensus 22 ~~~~~~~k~~l~~~~-~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~ 100 (333)
..+...+.....+++ .|...++..+..-+++-.++..++.+ .-...|+..++.+... +=++++...|.||++.
T Consensus 31 t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~-----~~~~~~~hYilla~~D-VEaNy~vV~AyQyTsm 104 (336)
T KOG2766|consen 31 TSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRK-----YIKAKWRHYILLAFVD-VEANYFVVKAYQYTSM 104 (336)
T ss_pred HcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhH-----HHHHHHHHhhheeEEe-ecccEEEeeehhhcch
Confidence 333334444324444 47778888888888888887765442 1234466688888888 8889999999999999
Q ss_pred hhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhcccCCCCCCCcc
Q 043160 101 TFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKE 180 (333)
Q Consensus 101 ~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (333)
..+.++-.-....+.+++|+++|.|-++.+ +.|+++|+.|++++++.+-. . +++.+.
T Consensus 105 tSi~lLDcwaip~v~~lsw~fLktrYrlmk------i~gV~iCi~GvvmvV~sDV~-------a---------gd~agg- 161 (336)
T KOG2766|consen 105 TSIMLLDCWAIPCVLVLSWFFLKTRYRLMK------ISGVVICIVGVVMVVFSDVH-------A---------GDRAGG- 161 (336)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhhhe------eeeEEeEecceEEEEEeeec-------c---------ccccCC-
Confidence 999999988888899999999887776665 99999999999998843310 0 112344
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHH
Q 043160 181 EHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGF 260 (333)
Q Consensus 181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 260 (333)
.+..+|+.+.+.++-+||+.++....+.|+. |........-+++++...+-. +.+...... +.++......+--++
T Consensus 162 snp~~GD~lvi~GATlYaVSNv~EEflvkn~-d~~elm~~lgLfGaIIsaIQ~-i~~~~~~~t--l~w~~~i~~yl~f~L 237 (336)
T KOG2766|consen 162 SNPVKGDFLVIAGATLYAVSNVSEEFLVKNA-DRVELMGFLGLFGAIISAIQF-IFERHHVST--LHWDSAIFLYLRFAL 237 (336)
T ss_pred CCCccCcEEEEecceeeeeccccHHHHHhcC-cHHHHHHHHHHHHHHHHHHHH-hhhccceee--EeehHHHHHHHHHHH
Confidence 5677999999999999999999999988887 557777777788888777774 444312222 333222222222122
Q ss_pred HHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCC
Q 043160 261 VSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRS 327 (333)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~ 327 (333)
+.+.-|.+.-.-+|..+++..++-..+.-.++.+. ..||-+.+|...+..+.+..|.+++..+++
T Consensus 238 ~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re~ 302 (336)
T KOG2766|consen 238 TMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTREK 302 (336)
T ss_pred HHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecccc
Confidence 25566666667788889998888888899999988 678999999999999999999888865443
No 28
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.53 E-value=5.4e-13 Score=109.22 Aligned_cols=258 Identities=9% Similarity=0.040 Sum_probs=190.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHH
Q 043160 39 HVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMA 118 (333)
Q Consensus 39 ~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~ 118 (333)
..+++.++..-.++.=.+..++++. +.++..-+.....+... .+++...+.|++++|-....+-.++.|+-+.+++
T Consensus 54 laLVf~qC~~N~vfAkvl~~ir~~~---~~D~t~~~~YaAcs~sY-LlAMVssN~Alq~vpYPTqVlgKScKPIPVMilG 129 (337)
T KOG1580|consen 54 LALVFFQCTANTVFAKVLFLIRKKT---EIDNTPTKMYAACSASY-LLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILG 129 (337)
T ss_pred HHHHHHHHHHHHHHHHhheeecccc---cccCCcchHHHHHHHHH-HHHHHhccchhcccCCcHHHhcccCCCcceeeee
Confidence 4445666665555543333222221 11122223344444444 8888999999999999999999999999999999
Q ss_pred HHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHH
Q 043160 119 WIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWS 198 (333)
Q Consensus 119 ~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a 198 (333)
.++.+.+-++++ ...+.+++.|+.+..+..+... ..+. +....|.++.+++-..-+
T Consensus 130 Vl~~~KsY~w~k------Y~cVL~IV~GValFmYK~~Kv~-----------------g~e~-~t~g~GElLL~lSL~mDG 185 (337)
T KOG1580|consen 130 VLFAHKSYHWRK------YCCVLMIVVGVALFMYKENKVG-----------------GAED-KTFGFGELLLILSLAMDG 185 (337)
T ss_pred hhhhcccccHHH------HHHHHHHHHHHHHhhccccccC-----------------CCcc-cccchHHHHHHHHHHhcc
Confidence 999877777775 9999999999999875433221 1234 667899999999999999
Q ss_pred HHHHHHHHHhhhCC-CchHHHHHHHHHHHHHHHHHHHhhcc-CCccceeeccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 043160 199 CFIILEAFLLKSYP-AELSLTALMCFVSSVEGTILALAIER-GNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRK 276 (333)
Q Consensus 199 ~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~ 276 (333)
+....+.+..+++. ..-....++++.+.+.+..-..+... +++.-+....+..|+-+...++.+++++.+.+.-....
T Consensus 186 lTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~F 265 (337)
T KOG1580|consen 186 LTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEF 265 (337)
T ss_pred cchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHh
Confidence 99999988877764 23455667777776655544433221 02222222334567778888999999999999999999
Q ss_pred CceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160 277 GPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW 324 (333)
Q Consensus 277 ~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~ 324 (333)
+|..-+++..++-.++++.+++++++.++..||+|..+++.|...-..
T Consensus 266 gPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 266 GPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV 313 (337)
T ss_pred CCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence 999999999999999999999999999999999999999999776553
No 29
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.51 E-value=4.8e-13 Score=113.83 Aligned_cols=262 Identities=11% Similarity=0.090 Sum_probs=206.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHH
Q 043160 37 SQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFL 116 (333)
Q Consensus 37 ~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~l 116 (333)
++....+.+-+.+.+.-.....+.+++ ...++.++.....+..+ ..+..+-+.|++|++-....+-.++--+-+.+
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~---~~~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml 125 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAMLKWWKKE---LSGVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVML 125 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhccccc---CCCCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence 577778888888877775544333332 23345567778888888 88899999999999999999999999999999
Q ss_pred HHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHH
Q 043160 117 MAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFS 196 (333)
Q Consensus 117 l~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~ 196 (333)
++.++.|.|.+..+ .+...++-.|+.+..+.+..+ ..++.+. ++...|..+....-.+
T Consensus 126 mg~Lvy~~ky~~~e------Yl~~~LIs~GvsiF~l~~~s~---------------s~~~~g~-~ns~~G~~Ll~~~L~f 183 (327)
T KOG1581|consen 126 MGTLVYGRKYSSFE------YLVAFLISLGVSIFSLFPNSD---------------SSSKSGR-ENSPIGILLLFGYLLF 183 (327)
T ss_pred HHHHHhcCccCcHH------HHHHHHHHhheeeEEEecCCC---------------CccccCC-CCchHhHHHHHHHHHH
Confidence 99999999999887 898888889998876543211 1122455 6788999999999999
Q ss_pred HHHHHHHHHHHhhhCC-CchHHHHHHHHHHHHHHHHHHHhhccCCccce--eeccchhHHHHHHHHHHHHHHHHHHHHHH
Q 043160 197 WSCFIILEAFLLKSYP-AELSLTALMCFVSSVEGTILALAIERGNTGIW--LLHFDAKLLSVLYGGFVSCTAYFIMGWLM 273 (333)
Q Consensus 197 ~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~a~ 273 (333)
-++-+..++++.+++. ++....++.++...+......+..+. ..... -...++.+.-+.....++.+++.+.++-+
T Consensus 184 DgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~-~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI 262 (327)
T KOG1581|consen 184 DGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGH-LLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTI 262 (327)
T ss_pred HhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCC-CchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhH
Confidence 9999999999988765 46778888888887776666432221 11111 11223456667777888999999999999
Q ss_pred hhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheec
Q 043160 274 KRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWG 325 (333)
Q Consensus 274 ~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~ 325 (333)
++.++.+.+.++.++-++++.++.+.+|+++++.|+.|..+++.|+.+-...
T Consensus 263 ~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~ 314 (327)
T KOG1581|consen 263 ERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILL 314 (327)
T ss_pred hhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998886643
No 30
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.51 E-value=2.5e-12 Score=109.47 Aligned_cols=254 Identities=15% Similarity=0.118 Sum_probs=191.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCC---CCCCHHH-HHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHH
Q 043160 38 QHVLVAYRMVVATSLIAPFAIVLERKTR---PKMTFRI-FAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPAL 113 (333)
Q Consensus 38 ~~~~~~~r~~~~~~~l~~~~~~~~~~~~---~~~~~~~-~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~ 113 (333)
|...+.++.++-.++....-...+++.. -..+|++ .++....++.. +....+.++++++++.+..+...+..++|
T Consensus 45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat-a~DIGLSN~sl~yVtlSlYTM~KSSsi~F 123 (349)
T KOG1443|consen 45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT-ALDIGLSNWSLEYVTLSLYTMTKSSSILF 123 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh-hcccccccceeeeeeeeeeeeccccHHHH
Confidence 7777787877776666554444343322 2456655 55677788887 99999999999999999999999999999
Q ss_pred HHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHH
Q 043160 114 TFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAG 193 (333)
Q Consensus 114 ~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a 193 (333)
+.+++.++.-||.++.- ...+.++.+|+.+.++. +. +....|..+...+
T Consensus 124 IllFs~if~lEk~~w~L------~l~v~lI~~Glflft~K------------------------sT-qf~i~Gf~lv~~a 172 (349)
T KOG1443|consen 124 ILLFSLIFKLEKFRWAL------VLIVLLIAVGLFLFTYK------------------------ST-QFNIEGFFLVLAA 172 (349)
T ss_pred HHHHHHHHHhHHHHHHH------HHHHHHHhhheeEEEec------------------------cc-ceeehhHHHHHHH
Confidence 99999999999999885 77777777888887631 23 4556888888888
Q ss_pred HHHHHHHHHHHHHHhhhCC----CchHHHHHHHHHHHHHHHHHHHhhccCCccceee-----ccchhHHHHHHHHHHHHH
Q 043160 194 CFSWSCFIILEAFLLKSYP----AELSLTALMCFVSSVEGTILALAIERGNTGIWLL-----HFDAKLLSVLYGGFVSCT 264 (333)
Q Consensus 194 ~~~~a~~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~ 264 (333)
+++.++-....+..+++.+ +|.+..+...-...+.++|..+.+|+.....++. .....+..+...+..+..
T Consensus 173 S~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~l 252 (349)
T KOG1443|consen 173 SLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLL 252 (349)
T ss_pred HHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHH
Confidence 8888887777777776654 5777777777788888899998888733322211 111234444443333333
Q ss_pred HH---HHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhe
Q 043160 265 AY---FIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVL 323 (333)
Q Consensus 265 ~~---~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~ 323 (333)
++ ...+.-..+.+....++.+-..-+.+.+++.++.+|+++...+.|..+...|+.+..
T Consensus 253 aF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~ 314 (349)
T KOG1443|consen 253 AFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR 314 (349)
T ss_pred HHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence 33 344556778899999999999999999999999999999999999999999999883
No 31
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.43 E-value=4.1e-13 Score=103.84 Aligned_cols=124 Identities=29% Similarity=0.459 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHH-HHHHHHHHHHHH
Q 043160 195 FSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFV-SCTAYFIMGWLM 273 (333)
Q Consensus 195 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~ 273 (333)
++||.+.+..|+..++. |+.....+++..+.+ ..+.....+. .. ....+...+....+.+++ +.+++.++++++
T Consensus 1 ~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 75 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKI-SPLSITFWRFLIAGI-LLILLLILGR-KP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYAL 75 (126)
T ss_pred ceeeeHHHHHHHHhccC-CHHHHHHHHHHHHHH-HHHHHHhhcc-cc--ccCCChhhhhhhhHhhccceehHHHHHHHHH
Confidence 46899999999999886 678999999999988 6666655544 22 222334567777788888 899999999999
Q ss_pred hhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhe
Q 043160 274 KRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVL 323 (333)
Q Consensus 274 ~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~ 323 (333)
++.+++.++++.+++|+++.++++++++|++++.+++|+++++.|+++..
T Consensus 76 ~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 76 KYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988753
No 32
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.40 E-value=9.1e-12 Score=104.69 Aligned_cols=279 Identities=16% Similarity=0.178 Sum_probs=198.7
Q ss_pred HHHHHHHHHHHHhc----C----CCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC-------------CHHHHHHHHHH
Q 043160 21 SSIMSIITKIALTQ----G----MSQHVLVAYRMVVATSLIAPFAIVLERKTRPKM-------------TFRIFAKIALL 79 (333)
Q Consensus 21 ~~~~~~~~k~~l~~----~----~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~-------------~~~~~~~~~~~ 79 (333)
=+.+.+..|++ ++ + -+|+..+...++.-+.+++.+.+++.|...+.. +.+ ....+.-
T Consensus 15 Gs~Ntl~aKwa-dsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~-p~lfl~P 92 (372)
T KOG3912|consen 15 GSFNTLVAKWA-DSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN-PVLFLPP 92 (372)
T ss_pred ccHHHHHHHHH-HhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC-cceecCh
Confidence 35677888887 32 2 247888887787788888888877766432211 111 1223445
Q ss_pred HHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCccc
Q 043160 80 GLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILE 159 (333)
Q Consensus 80 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~ 159 (333)
.++. ..+..+.|.|+.+++++.-+.+.....+|+.+++.-+++++++.++ |+|+....+|++++-..+-.
T Consensus 93 al~D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~q------Wl~i~fv~lGlviVg~~d~~--- 162 (372)
T KOG3912|consen 93 ALCD-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQ------WLGILFVSLGLVIVGSLDVH--- 162 (372)
T ss_pred HHHH-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhh------HHHHHHHHhhhheeeeeecc---
Confidence 6666 7889999999999999999999999999999999999999999997 99999999999998632200
Q ss_pred CCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-CchHHHHHHHHHHHHHHHHHHHhhcc
Q 043160 160 FPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYP-AELSLTALMCFVSSVEGTILALAIER 238 (333)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (333)
.+..+-.+. ++...|+++.+.+-+.-|+..+...|.+++.+ +|.....|.-.++.+.+...++...-
T Consensus 163 -----------~~~~p~~d~-s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~y 230 (372)
T KOG3912|consen 163 -----------LVTDPYTDY-SSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYY 230 (372)
T ss_pred -----------cccCCcccc-ccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhh
Confidence 001111234 56789999999999999999999999888875 68888889888886655554443211
Q ss_pred C-Cccceeecc---------------chhHHHHHHHHHH-HHHHHHHHHH-HHhhcCceeeeeccchhHHHHHHHHHHHh
Q 043160 239 G-NTGIWLLHF---------------DAKLLSVLYGGFV-SCTAYFIMGW-LMKRKGPVFVSSFNPLSMVIIAILGSFFI 300 (333)
Q Consensus 239 ~-~~~~~~~~~---------------~~~~~~l~~~~~~-~~~~~~~~~~-a~~~~~~~~~~~~~~~~pv~~~~~~~~~~ 300 (333)
. ....++..+ ......+...|.. +..-|-+-.. -.|+.+++.-.++..++..+.-+++....
T Consensus 231 i~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~ 310 (372)
T KOG3912|consen 231 IPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMG 310 (372)
T ss_pred eecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHH
Confidence 0 010111111 1112223333333 3222222222 24668888889999999999999999999
Q ss_pred ccccchhhhHHHHHHHhhhhhhe
Q 043160 301 AEELFLGRIVGAIVIVIGLYMVL 323 (333)
Q Consensus 301 ~e~~~~~~~~G~~li~~g~~~~~ 323 (333)
.|.+...|+.|.++.+.|+++++
T Consensus 311 ~E~f~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 311 WEYFHLLQILGFLILIMGIILYN 333 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998876
No 33
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.38 E-value=1.7e-11 Score=107.44 Aligned_cols=133 Identities=14% Similarity=0.211 Sum_probs=113.2
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH--HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 043160 6 HHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQ--HVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFE 83 (333)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~--~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 83 (333)
...+|..++++++++|+...+..|.. .++.++ .....+++.++.+++.++....+++ +..+.+++......++++
T Consensus 125 ~~~~G~~~~l~a~~~~a~~~~~~k~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 201 (260)
T TIGR00950 125 INPAGLLLGLGSGISFALGTVLYKRL-VKKEGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIG 201 (260)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhHH-hhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHH
Confidence 34679999999999999999999999 455664 4555578999998888876654333 233566777788889888
Q ss_pred HHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHH
Q 043160 84 PVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGA 147 (333)
Q Consensus 84 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv 147 (333)
...++.++++++++.+++.++.+.++.|+++.+++++++||+++..+ +.|..+.+.|+
T Consensus 202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~------~~G~~li~~g~ 259 (260)
T TIGR00950 202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQ------LIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHhc
Confidence 89999999999999999999999999999999999999999999997 99999999886
No 34
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.35 E-value=3.8e-10 Score=96.87 Aligned_cols=251 Identities=16% Similarity=0.163 Sum_probs=171.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhh-chHHHH
Q 043160 37 SQHVLVAYRMVVATSLIAPFAIVLERKTRPKMT--FRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMC-NILPAL 113 (333)
Q Consensus 37 ~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~ 113 (333)
+|......-.+ +++++........+ |..+ .+.+...++.|++. ..++...+.++++.+++.+.++. ..+-+.
T Consensus 11 ~~~~Q~lG~t~-Gali~alv~~~~~~---p~~~~~~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLvg 85 (269)
T PF06800_consen 11 KPANQILGTTI-GALIFALVVFLFRQ---PAFSMSGTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLVG 85 (269)
T ss_pred cHHHHHHHHHH-HHHHHHHHHHHHhC---CCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHHH
Confidence 45555544333 33333333333333 3444 37788888889998 99999999999999999999995 688888
Q ss_pred HHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHH
Q 043160 114 TFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAG 193 (333)
Q Consensus 114 ~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a 193 (333)
+.+++.++++|--+..+. ..-.+++++.++|+.+.+..++++.. .++. ++...|....+.+
T Consensus 86 ~sl~gv~~fgEW~~~~~~--~~G~~Al~liiiGv~lts~~~~~~~~----------------~~~~-~~~~kgi~~Ll~s 146 (269)
T PF06800_consen 86 TSLIGVLFFGEWTTTTQK--IIGFLALVLIIIGVILTSYQDKKSDK----------------SSSK-SNMKKGILALLIS 146 (269)
T ss_pred HHHHHHhhcCCCCCcchH--HHHHHHHHHHHHHHHHhccccccccc----------------cccc-cchhhHHHHHHHH
Confidence 999999999998876650 11134778888899887754332110 0124 5667899999999
Q ss_pred HHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHHHHHHHHHHHHHH
Q 043160 194 CFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLM 273 (333)
Q Consensus 194 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~ 273 (333)
.+.|..|.+..|.. +. ++.....=+.+-..+....+....++ ... ....|.. +..|++-.++..++..+.
T Consensus 147 tigy~~Y~~~~~~~--~~-~~~~~~lPqaiGm~i~a~i~~~~~~~-~~~-----~k~~~~n-il~G~~w~ignl~~~is~ 216 (269)
T PF06800_consen 147 TIGYWIYSVIPKAF--HV-SGWSAFLPQAIGMLIGAFIFNLFSKK-PFF-----EKKSWKN-ILTGLIWGIGNLFYLISA 216 (269)
T ss_pred HHHHHHHHHHHHhc--CC-ChhHhHHHHHHHHHHHHHHHhhcccc-ccc-----ccchHHh-hHHHHHHHHHHHHHHHhH
Confidence 99999999986652 22 34444443332222222222221111 111 1122333 456888888899999999
Q ss_pred hhcCceeeeeccchhHHHHHHHHHHHhccccchhh----hHHHHHHHhhhhh
Q 043160 274 KRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGR----IVGAIVIVIGLYM 321 (333)
Q Consensus 274 ~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~----~~G~~li~~g~~~ 321 (333)
++.+.+..=.+..+..+++.+.+.+++||+=+..+ .+|.++++.|.++
T Consensus 217 ~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 217 QKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred HhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999977664 4788888888654
No 35
>PRK13499 rhamnose-proton symporter; Provisional
Probab=99.35 E-value=2.9e-09 Score=95.10 Aligned_cols=304 Identities=12% Similarity=0.055 Sum_probs=188.6
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH--HHhh---cCCCCCCHHHHHHHH
Q 043160 3 LQYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAI--VLER---KTRPKMTFRIFAKIA 77 (333)
Q Consensus 3 ~~~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~--~~~~---~~~~~~~~~~~~~~~ 77 (333)
|+++...|++..+++.++||...+-.|.. +..+-..+-..-.+++.+ +.|+.. ...+ ......+.+.+...+
T Consensus 1 m~~~~~~G~~~~~i~~~~~GS~~~p~K~~--k~w~wE~~W~v~gi~~wl-~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~ 77 (345)
T PRK13499 1 MSNAIILGIIWHLIGGASSGSFYAPFKKV--KKWSWETMWSVGGIFSWL-ILPWLIAALLLPDFWAYYSSFSGSTLLPVF 77 (345)
T ss_pred CCchhHHHHHHHHHHHHHhhccccccccc--CCCchhHHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHhcCHHHHHHHH
Confidence 45567889999999999999999999985 434422221111111111 111111 1111 112234567788888
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhhHHHh-hchHHHHHHHHHHHHhcccc---ceecccchhhHHHHHHHHHHHHHHHHh
Q 043160 78 LLGLFEPVIGQNLYFTGLKCSTATFTVAM-CNILPALTFLMAWIFRLEKV---KIKSMRSQAKILGTIVTAGGAMCMTLL 153 (333)
Q Consensus 78 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~~~e~~---~~~~~~~~~~~~g~~l~~~Gv~li~~~ 153 (333)
+.|++. ..++..++.++++...+.+.++ ..++-+...++..++++|=- +..+ ...-.+|++++++|+.+....
T Consensus 78 l~G~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~--g~~~~~gv~liliGi~l~s~A 154 (345)
T PRK13499 78 LFGALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNG--GRMTLLGVLVALIGVAIVGRA 154 (345)
T ss_pred HHHHHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccch--HHHHHHHHHHHHHHHHHHHHh
Confidence 899998 9999999999999999999988 56999999999999988643 2221 223478999999999998753
Q ss_pred cCCcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHH-------HHHHHHhhhCCCchHHHHHHHH---
Q 043160 154 KGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFI-------ILEAFLLKSYPAELSLTALMCF--- 223 (333)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~--- 223 (333)
....+ . ++++ ++.+. .+..+|...++.+.+.+++|+ ...+...+...++.....-+..
T Consensus 155 g~~k~--------~--~~~~-~~~~~-~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~ 222 (345)
T PRK13499 155 GQLKE--------R--KMGI-KKAEE-FNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIM 222 (345)
T ss_pred hhhcc--------c--cccc-ccccc-cchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHH
Confidence 21110 0 0000 00233 577899999999999999998 4433321111133322222222
Q ss_pred HHHHHHHHH-HHh---hccCCc---cceeecc---chhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeee---c-cchhH
Q 043160 224 VSSVEGTIL-ALA---IERGNT---GIWLLHF---DAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSS---F-NPLSM 289 (333)
Q Consensus 224 ~~~~~~~~~-~~~---~~~~~~---~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~---~-~~~~p 289 (333)
.+.+..... ... ..+ +. .+...+. ..+...-+..|+.-.+++.++..+.++.+...... + +....
T Consensus 223 ~G~~~~n~~~~~~~~~k~~-~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~V 301 (345)
T PRK13499 223 GGGAITNLGFCFIRLAKNK-DLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYV 301 (345)
T ss_pred HHHHHHHHHHHHHHHhhCC-CcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHH
Confidence 333333221 111 111 11 1111110 12223334556667788888888888876654433 3 37788
Q ss_pred HHHHHHHHHHhccccc------hhhhHHHHHHHhhhhhheecC
Q 043160 290 VIIAILGSFFIAEELF------LGRIVGAIVIVIGLYMVLWGR 326 (333)
Q Consensus 290 v~~~~~~~~~~~e~~~------~~~~~G~~li~~g~~~~~~~~ 326 (333)
+++.+.+. ++||.=+ ..-++|+++++.|..+....+
T Consensus 302 iistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~~ 343 (345)
T PRK13499 302 LCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLGN 343 (345)
T ss_pred HHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhcc
Confidence 99999998 5999866 566899999999988876554
No 36
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.31 E-value=1e-11 Score=94.34 Aligned_cols=104 Identities=17% Similarity=0.326 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHH
Q 043160 43 AYRMVVATSLIAPFAIVLERKT--RPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWI 120 (333)
Q Consensus 43 ~~r~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~ 120 (333)
.+|+.++.+++..+...+++.+ .+..+++.+.+....|.++...++.++++|+++.+ +.++++.++.|+++.+++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 5789999999888877644321 12333455667777788885699999999999999 58889999999999999999
Q ss_pred HhccccceecccchhhHHHHHHHHHHHHHHHHh
Q 043160 121 FRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLL 153 (333)
Q Consensus 121 ~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~ 153 (333)
++|||+++++ +.+++++++|++++...
T Consensus 81 ~~~er~~~~~------~~a~~l~~~Gv~li~~~ 107 (113)
T PF13536_consen 81 FFKERLSPRR------WLAILLILIGVILIAWS 107 (113)
T ss_pred HhcCCCCHHH------HHHHHHHHHHHHHHhhh
Confidence 9999999997 99999999999999853
No 37
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.31 E-value=9.5e-12 Score=99.36 Aligned_cols=221 Identities=17% Similarity=0.165 Sum_probs=167.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCC
Q 043160 77 ALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGP 156 (333)
Q Consensus 77 ~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~ 156 (333)
...+++. ...++.|..|++..+++.++.+..+...|+.+++++.+|||++..+ +++.++++.|++++.+.++
T Consensus 57 aPF~i~W-t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~k------IlaailAI~GiVmiay~DN- 128 (290)
T KOG4314|consen 57 APFSIFW-TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFK------ILAAILAIGGIVMIAYADN- 128 (290)
T ss_pred cceEEEE-ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhh------HHHHHHHhCcEEEEEeccc-
Confidence 3444555 7789999999999999999999999999999999999999999887 9999999999999874332
Q ss_pred cccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHH--HH--HHHHHHH
Q 043160 157 ILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCF--VS--SVEGTIL 232 (333)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~ 232 (333)
.. ...+.|..+++.+++..|+|-+.-|+.....+-.....+..++ +. ....-+.
T Consensus 129 ---------------------~~-a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~l 186 (290)
T KOG4314|consen 129 ---------------------EH-ADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPAL 186 (290)
T ss_pred ---------------------hh-hhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHH
Confidence 33 5678999999999999999999999887665311111221111 11 1111122
Q ss_pred HHhhccCCccceeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHH
Q 043160 233 ALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGA 312 (333)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~ 312 (333)
.+.+. ....++......|..+...+.++..-.++.+.+.....|...++-.....+-....+.++-+-..+...++|.
T Consensus 187 IL~~T--~VE~~qsFA~~PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T 264 (290)
T KOG4314|consen 187 ILAFT--GVEHLQSFAAAPWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAAT 264 (290)
T ss_pred HHHHh--chHHHHHHhhCCchhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHH
Confidence 22222 2333332223457777776666777778888999999999999999999999999999877778999999999
Q ss_pred HHHHhhhhhheecCCCC
Q 043160 313 IVIVIGLYMVLWGRSKD 329 (333)
Q Consensus 313 ~li~~g~~~~~~~~~~~ 329 (333)
++|+.|-+++..++.+.
T Consensus 265 ~iI~i~FiLiiiP~d~~ 281 (290)
T KOG4314|consen 265 CIICIGFILIIIPEDKD 281 (290)
T ss_pred HHHHHhHHheecccchh
Confidence 99999999888776554
No 38
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.27 E-value=3.1e-11 Score=98.27 Aligned_cols=274 Identities=14% Similarity=0.131 Sum_probs=197.1
Q ss_pred HHHHHHHHHhc-CCC-HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchh
Q 043160 24 MSIITKIALTQ-GMS-QHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTAT 101 (333)
Q Consensus 24 ~~~~~k~~l~~-~~~-~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~ 101 (333)
+.+..|+.++. +++ -+.+.+++.+...+-+..+-..+..+. +.++.+.++..+.+. ....+.--.+++|++..
T Consensus 21 mTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~f----R~t~aK~WfpiSfLL-v~MIyt~SKsLqyL~vp 95 (309)
T COG5070 21 MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEF----RLTKAKKWFPISFLL-VVMIYTSSKSLQYLAVP 95 (309)
T ss_pred HHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhe----ehhhhhhhcCHHHHH-HHHHHhcccceeeeeee
Confidence 45556766422 333 244456666665555554433333222 234444455566665 55666677899999999
Q ss_pred hHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhcccCCCCCCCcch
Q 043160 102 FTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEE 181 (333)
Q Consensus 102 ~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (333)
..+++.++..+.++.....++|.|++..+ ..+-++.+...+.....+ +.... ... .
T Consensus 96 iYTiFKNltII~iAygEvl~Fgg~vtsl~------l~SFilMvlSS~va~w~D---------~q~~~--------~~~-~ 151 (309)
T COG5070 96 IYTIFKNLTIILIAYGEVLFFGGRVTSLE------LLSFILMVLSSVVATWGD---------QQASA--------FKA-Q 151 (309)
T ss_pred HHHHhccceeehhHhhHHHHhcCccchhh------HHHHHHHHHHHHHhccch---------hhHHH--------HHh-c
Confidence 99999999999999999999999999998 888888777666654211 11100 112 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-CchHHHHHHHHHHHHHHHHHHHhhccCCccceeec-cchhHHHHHHHH
Q 043160 182 HITKGALMIAAGCFSWSCFIILEAFLLKSYP-AELSLTALMCFVSSVEGTILALAIERGNTGIWLLH-FDAKLLSVLYGG 259 (333)
Q Consensus 182 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~ 259 (333)
..+.|.+++...++..+.+....|+..+-.+ .+....+|....+...+..+..+.|++++...... +......+.+.|
T Consensus 152 ~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISg 231 (309)
T COG5070 152 ILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISG 231 (309)
T ss_pred ccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHH
Confidence 4457899999999999999888887666543 35778899999999999999988886554432211 113345666778
Q ss_pred HHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecC
Q 043160 260 FVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGR 326 (333)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~ 326 (333)
++++...++-.|+++..+.+..++++.++..-..+.|.+++||+.+..++..+.+-..+...+...+
T Consensus 232 l~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavak 298 (309)
T COG5070 232 LCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAK 298 (309)
T ss_pred HHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 8877778888999999999999999999999999999999999999999999888877655555433
No 39
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=99.24 E-value=1e-09 Score=97.33 Aligned_cols=283 Identities=13% Similarity=0.168 Sum_probs=160.5
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHH-HHHHHHHHH
Q 043160 3 LQYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRI-FAKIALLGL 81 (333)
Q Consensus 3 ~~~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~g~ 81 (333)
|+.....|.+..+.++++-+....+-|....+ .+. .- .|+ .+.+++. ..+..+.|.
T Consensus 1 ~~~~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~---~~-----------------~~~--~~~~~~~l~~~~W~~G~ 57 (300)
T PF05653_consen 1 MNTDFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR---GS-----------------LRA--GSGGRSYLRRPLWWIGL 57 (300)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc---cc-----------------ccc--cchhhHHHhhHHHHHHH
Confidence 56667789999999999999999988887321 110 00 000 0001111 122344555
Q ss_pred HHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCC
Q 043160 82 FEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFP 161 (333)
Q Consensus 82 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~ 161 (333)
+...++..+.+.|+.+.|++..+++....-++.++++..++|||+++++ +.|+.+++.|..++... +|+....
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~------~~G~~l~i~G~~liv~~-~~~~~~~ 130 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRD------IVGCALIILGSVLIVIF-APKEEPI 130 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhH------HhhHHHHHhhheeeEEe-CCCCCCc
Confidence 5557788889999999999999999999999999999999999999998 99999999999887643 2322111
Q ss_pred chhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHH-------HHHHHHH
Q 043160 162 WKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSV-------EGTILAL 234 (333)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 234 (333)
.+..+.... -.+ ... ...... .......+.....+|..++ +...........++. ....+..
T Consensus 131 ~t~~~l~~~------~~~-~~f-l~y~~~-~~~~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~ 199 (300)
T PF05653_consen 131 HTLDELIAL------LSQ-PGF-LVYFIL-VLVLILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISILIKL 199 (300)
T ss_pred CCHHHHHHH------hcC-cce-ehhHHH-HHHHHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHHHHHH
Confidence 111111000 000 011 111111 1112222222222221111 111000000011111 0111111
Q ss_pred hhccCCccceeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchh-HHHHHHHHHHHhccc--cch----h
Q 043160 235 AIERGNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLS-MVIIAILGSFFIAEE--LFL----G 307 (333)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~-pv~~~~~~~~~~~e~--~~~----~ 307 (333)
..++ ..++ .....|..++.+..+........++|+++.+++.+.++.+.. ...+++-|.++++|. .+. .
T Consensus 200 ~~~g--~~~f--~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~ 275 (300)
T PF05653_consen 200 TFSG--DNQF--TYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIG 275 (300)
T ss_pred HhcC--chhh--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHH
Confidence 1111 1222 222334444333333666677788999999999998888774 455566677788876 444 3
Q ss_pred hhHHHHHHHhhhhhheecCCCCC
Q 043160 308 RIVGAIVIVIGLYMVLWGRSKDQ 330 (333)
Q Consensus 308 ~~~G~~li~~g~~~~~~~~~~~~ 330 (333)
...|+.+++.|+++....|+++.
T Consensus 276 ~~~G~~~ii~GV~lL~~~~~~~~ 298 (300)
T PF05653_consen 276 FLCGFLIIIIGVFLLSSSKDKEI 298 (300)
T ss_pred HHHHHHHHHHhhheeeccCchhc
Confidence 45778889999999987776554
No 40
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.24 E-value=5.7e-10 Score=99.46 Aligned_cols=135 Identities=13% Similarity=0.102 Sum_probs=111.8
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 043160 8 AKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIG 87 (333)
Q Consensus 8 ~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 87 (333)
..|.++.+.++++|+...+..|.. .++.++..... ...++.+.+.++...... ....++..+...+..|++++.++
T Consensus 147 ~~G~ll~l~aa~~~a~~~v~~r~~-~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~ 222 (293)
T PRK10532 147 LTGAALALGAGACWAIYILSGQRA-GAEHGPATVAI-GSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALP 222 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-hccCCchHHHH-HHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHH
Confidence 458999999999999999999998 56677777654 455666666666544322 12234555666678999988999
Q ss_pred HHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160 88 QNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL 152 (333)
Q Consensus 88 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 152 (333)
+.++++++++.+++.++++.+++|+++.+++++++||+++..+ ++|.+++++|++....
T Consensus 223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~------~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQ------WLALGAIIAASMGSTL 281 (293)
T ss_pred HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999998 9999999999999864
No 41
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.22 E-value=5.4e-10 Score=99.58 Aligned_cols=137 Identities=13% Similarity=0.091 Sum_probs=114.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 043160 8 AKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIG 87 (333)
Q Consensus 8 ~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 87 (333)
..|.++.++++++|+......|.. .+. ++.....+++.++.+.+.++............+.+.+..+...++++...+
T Consensus 149 ~~G~l~~l~a~~~~a~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~ 226 (292)
T PRK11272 149 PWGAILILIASASWAFGSVWSSRL-PLP-VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA 226 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhc-CCC-cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999999987 443 345566788888888887766543322111234577888899999988999
Q ss_pred HHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160 88 QNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL 152 (333)
Q Consensus 88 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 152 (333)
+.++++++++.+++.++++..+.|+++++++++++||+++..+ ++|.++.+.|+.+...
T Consensus 227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~------iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIE------WLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHH------HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998 9999999999999763
No 42
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.20 E-value=1.2e-09 Score=99.37 Aligned_cols=137 Identities=9% Similarity=0.097 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCH-HHHHHHHHHHHHHHHHHHHHHHhhcCC----CCCCHHHHHHHHHHHHHH
Q 043160 9 KPYLGVIFMQFCSSIMSIITKIALTQGMSQ-HVLVAYRMVVATSLIAPFAIVLERKTR----PKMTFRIFAKIALLGLFE 83 (333)
Q Consensus 9 ~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~-~~~~~~r~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~ 83 (333)
.|.++++.++++|+...+..|... +..++ ...+++...++.+.+.+.....++... ...+.. ...++..++.
T Consensus 189 lG~~l~l~aa~~wa~~~il~~~~~-~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~- 265 (358)
T PLN00411 189 IGGALLTIQGIFVSVSFILQAHIM-SEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII- 265 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH-
Confidence 478899999999999999999884 44544 455666666666666555544333211 111222 2234445555
Q ss_pred HHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhc
Q 043160 84 PVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLK 154 (333)
Q Consensus 84 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~ 154 (333)
..+++.++++++++.+++.++++.++.|++++++++++++|+++..+ ++|.++++.|+.++...+
T Consensus 266 t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~------~iG~~LIl~Gv~l~~~~~ 330 (358)
T PLN00411 266 TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGC------LIGGILITLGFYAVMWGK 330 (358)
T ss_pred HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhhh
Confidence 47789999999999999999999999999999999999999999998 999999999999987543
No 43
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.20 E-value=2.4e-10 Score=91.71 Aligned_cols=139 Identities=17% Similarity=0.207 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhC------CCchHHHHHHHHHHHHHHHHHHHhhccCCccceee-------c-cchh
Q 043160 186 GALMIAAGCFSWSCFIILEAFLLKSY------PAELSLTALMCFVSSVEGTILALAIERGNTGIWLL-------H-FDAK 251 (333)
Q Consensus 186 G~~~~l~a~~~~a~~~v~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~ 251 (333)
|.++++.+.++.+++.++.|+..++. .++.....+....+.+.+.|.....|+........ . ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 67899999999999999999988872 36889999999999999999988877522111110 0 2244
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160 252 LLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW 324 (333)
Q Consensus 252 ~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~ 324 (333)
+..++..|++........+..+++.+|...++.+.++.+...+.+++++||++|+.++.|.++.+.|.+++.+
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 5556666666888899999999999999999999999999999999999999999999999999999988764
No 44
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.18 E-value=1.9e-11 Score=102.47 Aligned_cols=271 Identities=13% Similarity=0.075 Sum_probs=194.8
Q ss_pred HHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHHHHhhc----CCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043160 26 IITKIALTQG----MSQHVLVAYRMVVATSLIAPFAIVLERK----TRP--KMTFRIFAKIALLGLFEPVIGQNLYFTGL 95 (333)
Q Consensus 26 ~~~k~~l~~~----~~~~~~~~~r~~~~~~~l~~~~~~~~~~----~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~al 95 (333)
...|+.++.. =.|...+++++++...+...+.....+- ..| +++.+..+.+...++.- .+...+-++++
T Consensus 45 f~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVf-i~mI~fnnlcL 123 (347)
T KOG1442|consen 45 FLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVF-ILMISFNNLCL 123 (347)
T ss_pred hhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhee-eeehhccceeh
Confidence 3456665331 2478888899988877766555433322 122 24455566667777766 66677778899
Q ss_pred cccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhcccCCCC
Q 043160 96 KCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETG 175 (333)
Q Consensus 96 ~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (333)
+|++++...+-.++..+|++++++.++|+|-+... ..+..+++.|-.+ |-+ .|.
T Consensus 124 ~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~------~~~C~lIi~GF~l-----Gvd---------qE~------ 177 (347)
T KOG1442|consen 124 KYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFA------LGCCLLIILGFGL-----GVD---------QEG------ 177 (347)
T ss_pred hhcceEEEEeccchhhhHHHHhHHhhccccccccc------ceeehhheehhee-----ccc---------ccc------
Confidence 99999999999999999999999999999998875 5555554444433 111 100
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCC-chHHHHHHHHHHHHHHHHHHHhhccCCcccee---eccchh
Q 043160 176 THNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPA-ELSLTALMCFVSSVEGTILALAIERGNTGIWL---LHFDAK 251 (333)
Q Consensus 176 ~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 251 (333)
... .-.+.|.++++.++++-|+..+..||......+ -...++++...+.+.++|...+..+ -...+. .+....
T Consensus 178 -~~~-~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge-~~~v~~~~~l~a~~F 254 (347)
T KOG1442|consen 178 -STG-TLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGE-FQAVVGFPHLPAIKF 254 (347)
T ss_pred -ccC-ccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcch-HHHHcCcccchHHHH
Confidence 123 456799999999999999999999987666554 4678889999999999999876442 111121 223345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecC
Q 043160 252 LLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGR 326 (333)
Q Consensus 252 ~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~ 326 (333)
|..+...|++++.-.+.-.+=+|-.+|....+-..-.-..-.+++..+++|.-+...|-|-.+++.|...+++-|
T Consensus 255 w~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk 329 (347)
T KOG1442|consen 255 WILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVK 329 (347)
T ss_pred HHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHH
Confidence 666666666644444444455677899899988888999999999999999999999999999999988887544
No 45
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.17 E-value=6.1e-10 Score=93.70 Aligned_cols=268 Identities=10% Similarity=0.076 Sum_probs=175.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-chhhHHHhhchHHHHHHHH
Q 043160 39 HVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCS-TATFTVAMCNILPALTFLM 117 (333)
Q Consensus 39 ~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~-~~~~~~~l~~~~pi~~~ll 117 (333)
...++.++++.+.--+++.--.. ..+++.+.+++..... .. ...+.+-++++++- +...=.++.+-.++.+.++
T Consensus 34 NLITFaqFlFia~eGlif~skf~-~~k~kiplk~Y~i~V~---mF-F~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~ 108 (330)
T KOG1583|consen 34 NLITFAQFLFIATEGLIFTSKFF-TVKPKIPLKDYAITVA---MF-FIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL 108 (330)
T ss_pred eehHHHHHHHHHHhceeeecccc-ccCCCCchhhhheehh---ee-eeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence 45556666555554444321111 1235666665543332 22 44567777888763 4444456678899999999
Q ss_pred HHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHH
Q 043160 118 AWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSW 197 (333)
Q Consensus 118 ~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~ 197 (333)
++++.|.|-+.+| ..++.+.-+|+++.++...++... ..+.-+.++..++. ..+..|+.+...+.+..
T Consensus 109 g~il~~k~Ys~~Q------y~Sv~~iTiGiiIcTl~s~~d~~~-----~~~~l~~~~~~~~~-~~w~iGi~lL~~al~~s 176 (330)
T KOG1583|consen 109 GWILLGKRYSLRQ------YSSVLMITIGIIICTLFSSKDGRS-----KLSGLDSGSAQSDF-FWWLIGIALLVFALLLS 176 (330)
T ss_pred HHHhccceeehhh------hhhHHhhhhhheeEEeecCcchhh-----hhcccccCcccccc-hHHHHHHHHHHHHHHHH
Confidence 9999998888886 999999999999998766543221 01111111222344 66789999999999999
Q ss_pred HHHHHHHHHHhhhCC-CchHHHHHHHHHHHHHHHHHHHhhc-------cCC---ccceeeccchhHHHHHHHHHHHHHHH
Q 043160 198 SCFIILEAFLLKSYP-AELSLTALMCFVSSVEGTILALAIE-------RGN---TGIWLLHFDAKLLSVLYGGFVSCTAY 266 (333)
Q Consensus 198 a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~ 266 (333)
|.-.+.++..-++++ ++.+..++........++...--.. ..+ .+.....-+..|..+....+....+.
T Consensus 177 a~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~Ci 256 (330)
T KOG1583|consen 177 AYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCI 256 (330)
T ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHH
Confidence 999999988888876 5677888888777665544321100 000 00010111234544443222233333
Q ss_pred HHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhe
Q 043160 267 FIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVL 323 (333)
Q Consensus 267 ~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~ 323 (333)
--.+.-..+.++..+++...++-.++.+++.+.|+..+++.-|+|.+++..|..++.
T Consensus 257 kgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 257 KGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred HhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 334444566778899999999999999999999999999999999999999977765
No 46
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.15 E-value=7.5e-10 Score=98.14 Aligned_cols=134 Identities=12% Similarity=0.078 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHHHHHHH
Q 043160 187 ALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTAY 266 (333)
Q Consensus 187 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 266 (333)
..+.+.++++|+...+..|+..++. ++ ...+......+...|...... ....++.+....+..+...++.....+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~-~~--~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKE-PD--FLWWALLAHSVLLTPYGLWYL--AQVGWSRLPATFWLLLAISAVANMVYF 77 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCch-hH--HHHHHHHHHHHHHHHHHHHhc--ccCCCCCcchhhHHHHHHHHHHHHHHH
Confidence 4678999999999999999877764 23 345555666667777665321 112232223233444444444488999
Q ss_pred HHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheec
Q 043160 267 FIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWG 325 (333)
Q Consensus 267 ~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~ 325 (333)
.++++++++.+++.++++.+++|+++.+++++++||+++..+++|.+++++|+++...+
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~ 136 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS 136 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999887654
No 47
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.12 E-value=2.5e-09 Score=95.47 Aligned_cols=133 Identities=12% Similarity=0.099 Sum_probs=104.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 043160 8 AKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIG 87 (333)
Q Consensus 8 ~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 87 (333)
..|.++++.++++|+...+..|.. .++.++..... ......+.+...... ......+.+.+......++. ..++
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~-~~~~~~~~~~~---~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~~-t~~~ 228 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKY-ARGKNGITLFF---ILTALALWIKYFLSP-QPAMVFSLPAIIKLLLAAAA-MGFG 228 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhc-cCCCCchhHHH---HHHHHHHHHHHHHhc-CccccCCHHHHHHHHHHHHH-HHHH
Confidence 458899999999999999999998 56677765432 233333333222222 11123456667777777754 5899
Q ss_pred HHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160 88 QNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL 152 (333)
Q Consensus 88 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 152 (333)
+.++++++++.+++.++.+.++.|++..+++++++||+++..+ ++|.++++.|+.+...
T Consensus 229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~------~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSF------WQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHhHHHHhh
Confidence 9999999999999999999999999999999999999999998 9999999999988763
No 48
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.08 E-value=1.4e-09 Score=97.17 Aligned_cols=139 Identities=14% Similarity=0.177 Sum_probs=109.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCcccee--eccchhHHHHHHH
Q 043160 181 EHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWL--LHFDAKLLSVLYG 258 (333)
Q Consensus 181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~ 258 (333)
++...|.++.+.++++|+...+..|.. .+. +|....++++.++.+.+.+...... +..... ..+...+... ..
T Consensus 4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~-~~~~~~~~R~~~a~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~ 78 (296)
T PRK15430 4 KQTRQGVLLALAAYFIWGIAPAYFKLI-YYV-PADEILTHRVIWSFFFMVVLMSICR--QWSYLKTLIQTPQKIFML-AV 78 (296)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHh-cCC-CHHHHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHcCHHHHHHH-HH
Confidence 455689999999999999999999764 444 5789999999999887776654322 111110 0011222222 34
Q ss_pred HHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160 259 GFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW 324 (333)
Q Consensus 259 ~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~ 324 (333)
+.+ .+..+.++++++++.+++.++.+.++.|++..++++++++|+++..+++|+++.++|+.+...
T Consensus 79 ~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~ 145 (296)
T PRK15430 79 SAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW 145 (296)
T ss_pred HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 555 888899999999999999999999999999999999999999999999999999999887653
No 49
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.04 E-value=8.9e-10 Score=94.15 Aligned_cols=215 Identities=14% Similarity=0.086 Sum_probs=132.8
Q ss_pred chhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCC--chhhhhhc-ccCCCC
Q 043160 99 TATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFP--WKQVRILH-NQSETG 175 (333)
Q Consensus 99 ~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~--~~~~~~~~-~~~~~~ 175 (333)
+........+..++++++.++...+||.+..+ +++.++...|++...+.+.+..... ..+....+ .++...
T Consensus 3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~------i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~ 76 (222)
T TIGR00803 3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQLK------ILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAK 76 (222)
T ss_pred cccchHHHHhcchHHHHHhcccccceeeehHH------HHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcc
Confidence 34455667888999999999999999988664 9999999999987554332110000 00000000 000001
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCc-cceeeccchhHHH
Q 043160 176 THNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNT-GIWLLHFDAKLLS 254 (333)
Q Consensus 176 ~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 254 (333)
.... ++...|....+.+.++-++..+.+++..|+.+............-.+..........+.+. ...... ..+..
T Consensus 77 ~~~~-g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 153 (222)
T TIGR00803 77 TLMF-GNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFF--IGYPT 153 (222)
T ss_pred cccc-ccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcc--cCCch
Confidence 1223 4556788888888888888889988876654322222222221111111111111111011 111100 11111
Q ss_pred -HHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhh
Q 043160 255 -VLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMV 322 (333)
Q Consensus 255 -l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~ 322 (333)
.....+....+..+..+.+|+.++...+....++++++.+++++++||+++..++.|+.+++.|++++
T Consensus 154 ~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 154 AVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 22223337777888999999999999999999999999999999999999999999999999997753
No 50
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.04 E-value=2.5e-09 Score=93.45 Aligned_cols=138 Identities=14% Similarity=0.173 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCc--cceeeccch-hHHHHHHHHHH
Q 043160 185 KGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNT--GIWLLHFDA-KLLSVLYGGFV 261 (333)
Q Consensus 185 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~l~~~~~~ 261 (333)
.|..+.+.++++|+...+..|. ..+. +|.+..++++..+.+.+.+......+... ...+..... .+..+...|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 4788999999999999999997 4444 68999999999998777666543321010 111111112 23445566666
Q ss_pred HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160 262 SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW 324 (333)
Q Consensus 262 ~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~ 324 (333)
....+.++++++++.+++.++.+.++.|+++.++++++++|+++..+++|.++.++|+.+...
T Consensus 80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~ 142 (256)
T TIGR00688 80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV 142 (256)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999999999999999999999999999887643
No 51
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.02 E-value=1.7e-08 Score=90.23 Aligned_cols=137 Identities=12% Similarity=0.160 Sum_probs=106.5
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---HHHHHHHHHHHHHHHHHHHHHHHhhcC-----CCCCCHHHHHHHHHH
Q 043160 8 AKPYLGVIFMQFCSSIMSIITKIALTQGMS---QHVLVAYRMVVATSLIAPFAIVLERKT-----RPKMTFRIFAKIALL 79 (333)
Q Consensus 8 ~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~---~~~~~~~r~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 79 (333)
..|.++++.++++|+...+..|... +..+ ......+-...+.+.+.......+... ....+.+.+..++..
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIM-SHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL 220 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence 3699999999999999999999973 3332 223334444444333332222222211 123456778889999
Q ss_pred HHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160 80 GLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT 151 (333)
Q Consensus 80 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 151 (333)
+++.++.++.++++++++.++++++.+..+.|++..+++++++||+++..+ ++|.+++++|+.+..
T Consensus 221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~------~iG~~lI~~gv~l~~ 286 (299)
T PRK11453 221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQ------FLGAVLIMAGLYINV 286 (299)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999998 999999999998865
No 52
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.96 E-value=2.3e-08 Score=84.14 Aligned_cols=225 Identities=10% Similarity=0.115 Sum_probs=169.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160 73 FAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL 152 (333)
Q Consensus 73 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 152 (333)
|+-...++.+. ...+.+...++.|++-..-.++..+.-+=+.+.+.++-|.|-+..+ .++..+...|.++.++
T Consensus 106 ~rtY~~la~~t-~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d------~~aA~lm~lGli~FTL 178 (367)
T KOG1582|consen 106 WRTYVILAFLT-VGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHD------YIAAMLMSLGLIWFTL 178 (367)
T ss_pred hhHhhhhHhhh-hhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHH------HHHHHHHHHHHHhhhh
Confidence 34445555555 6677788888888888888888888888888899999888877776 9999999999999986
Q ss_pred hcCCcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-CchHHHHHHHHHHHHHHHH
Q 043160 153 LKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYP-AELSLTALMCFVSSVEGTI 231 (333)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 231 (333)
.+.. ..+ .....|..+.-.+-++-|+-.-.+.+..+.++ +.....++...++.+.+..
T Consensus 179 ADs~--------------------~sP-NF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~ 237 (367)
T KOG1582|consen 179 ADSQ--------------------TSP-NFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFA 237 (367)
T ss_pred cccc--------------------cCC-CcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHH
Confidence 5431 123 44568888888888888887777888888776 3456677777888777666
Q ss_pred HHHhhccCCccceeeccc---hhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhh
Q 043160 232 LALAIERGNTGIWLLHFD---AKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGR 308 (333)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~ 308 (333)
......+ -.+.|..-.. ..+....+.+..+.++......-++..++.....+...+--+++++++++|..++|...
T Consensus 238 ~mvlTge-~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy 316 (367)
T KOG1582|consen 238 PMVLTGE-LFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQY 316 (367)
T ss_pred HHHhccc-chhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHH
Confidence 6654433 3444432111 23344444444466777777777888999999999999999999999999999999999
Q ss_pred hHHHHHHHhhhhhheecC
Q 043160 309 IVGAIVIVIGLYMVLWGR 326 (333)
Q Consensus 309 ~~G~~li~~g~~~~~~~~ 326 (333)
.-|..+++.|+++....+
T Consensus 317 ~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 317 VWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred hhhhHHHHHHHHhhcccC
Confidence 999999999999988776
No 53
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.91 E-value=1.5e-08 Score=90.83 Aligned_cols=138 Identities=14% Similarity=0.119 Sum_probs=106.8
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC---------CCHHHHHH-
Q 043160 8 AKPYLGVIFMQFCSSIMSIITKIALTQ--GMSQHVLVAYRMVVATSLIAPFAIVLERKTRPK---------MTFRIFAK- 75 (333)
Q Consensus 8 ~~~~l~~~~~~~~~~~~~~~~k~~l~~--~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~---------~~~~~~~~- 75 (333)
..|.+++++++++|+...+..|... + +.+|.....+.+..+.+.+.|+....+...... ........
T Consensus 144 ~~G~~~~l~a~~~~a~~~v~~k~~~-~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (302)
T TIGR00817 144 WAGFLSAMISNITFVSRNIFSKKAM-TIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV 222 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence 4599999999999999999999984 5 689999999999999999998876543211000 00011111
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160 76 IALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL 152 (333)
Q Consensus 76 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 152 (333)
....+.......+.++++++++++++.+++.....|+++.+++++++||+++..+ ++|.++++.|+.+...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~------~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQ------VFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhH------HHHHHHHHHHHHHHHH
Confidence 2233332323444677789999999999999999999999999999999999998 9999999999999763
No 54
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.89 E-value=3.7e-08 Score=75.95 Aligned_cols=123 Identities=15% Similarity=0.153 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHH-HH
Q 043160 185 KGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFV-SC 263 (333)
Q Consensus 185 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~ 263 (333)
.|.++.+.+.++-+...++-|+..++.++ ...... . . ..... . . . ....+++|++ ..
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~----~-~~~~~-~--~-----------~-p~~~i~lgl~~~~ 59 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F----I-AALLA-F--G-----------L-ALRAVLLGLAGYA 59 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H----H-HHHHH-H--h-----------c-cHHHHHHHHHHHH
Confidence 36788889999999999999998887653 211111 0 0 00000 0 0 0 1124567888 99
Q ss_pred HHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHH--HhccccchhhhHHHHHHHhhhhhheecCCCC
Q 043160 264 TAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSF--FIAEELFLGRIVGAIVIVIGLYMVLWGRSKD 329 (333)
Q Consensus 264 ~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~--~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~ 329 (333)
+++.+|.+++++.+++.+.++....++...+.++. ++||++|+.+++|+++|++|+++..++++|+
T Consensus 60 la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~~ 127 (129)
T PRK02971 60 LSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTKA 127 (129)
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCCC
Confidence 99999999999999999999999998888888875 8999999999999999999999998766553
No 55
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.88 E-value=1e-07 Score=76.41 Aligned_cols=133 Identities=17% Similarity=0.252 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC----CC-------CHHH
Q 043160 10 PYLGVIFMQFCSSIMSIITKIALTQ------GMSQHVLVAYRMVVATSLIAPFAIVLERKTRP----KM-------TFRI 72 (333)
Q Consensus 10 ~~l~~~~~~~~~~~~~~~~k~~l~~------~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~----~~-------~~~~ 72 (333)
|+++++.+.++.+...+..|..+++ +.++.....+....+.+++.+.....+..... .. ..+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 5788999999999999999998755 78999999999999999999988876654411 00 2244
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHH
Q 043160 73 FAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMC 149 (333)
Q Consensus 73 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 149 (333)
+..+...|++. ...+...+..++++++...++......+.+.++++++++|+++..+ +.|+++++.|+.+
T Consensus 81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~------~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQ------IIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHH------HHHHHHHHHHHhe
Confidence 56666677777 8899999999999999999999999999999999999999999997 9999999999875
No 56
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.76 E-value=2.7e-07 Score=69.38 Aligned_cols=68 Identities=18% Similarity=0.100 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160 78 LLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT 151 (333)
Q Consensus 78 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 151 (333)
..+.++...+..++.+++++.|.+.+.++.++.++++.+++++++|||+|.++ ++|+.++++|++++.
T Consensus 41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~------~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRH------WCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHh
Confidence 34446668899999999999999999999999999999999999999999997 999999999999875
No 57
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.76 E-value=3.1e-08 Score=75.14 Aligned_cols=108 Identities=19% Similarity=0.304 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHH
Q 043160 220 LMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSF 298 (333)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~ 298 (333)
++...+.+..........+ ....++......+......|++ ...++.++.++.++.++ .++++..++|+++.+++++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGR-LRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHcc-HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHH
Confidence 4445555555555544222 1111221222445556666777 56999999999999995 8889999999999999999
Q ss_pred HhccccchhhhHHHHHHHhhhhhheecCCCC
Q 043160 299 FIAEELFLGRIVGAIVIVIGLYMVLWGRSKD 329 (333)
Q Consensus 299 ~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~ 329 (333)
+++|+++..+++|.+++++|++++.+.+.+.
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~~ 111 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDLTG 111 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhccc
Confidence 9999999999999999999999998876543
No 58
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.75 E-value=2.3e-07 Score=82.52 Aligned_cols=130 Identities=13% Similarity=0.122 Sum_probs=102.5
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH---HHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 043160 7 HAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMV---VATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFE 83 (333)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 83 (333)
..+|+++.+++++.++......|.. +.+|...++.... ++..++.+.. + +.++. +.+..+..++.|++.
T Consensus 150 ~~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~--~--~~~~~-~~~~~~~~~~~Gi~~ 221 (290)
T TIGR00776 150 FKKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH--I--LAKPL-KKYAILLNILPGLMW 221 (290)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH--h--cccch-HHHHHHHHHHHHHHH
Confidence 3689999999999999999999976 2788877555444 2333333222 1 11222 233444566688886
Q ss_pred HHHHHHHHHHHhc-ccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhH----HHHHHHHHHHHHHH
Q 043160 84 PVIGQNLYFTGLK-CSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKI----LGTIVTAGGAMCMT 151 (333)
Q Consensus 84 ~~~~~~~~~~al~-~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~----~g~~l~~~Gv~li~ 151 (333)
..++.+|+.+.+ +.+++.++++.+..|+...+.+++++||+.++++ + +|.++.+.|+.++.
T Consensus 222 -~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~------~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 222 -GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKRE------MIAISVGIILIIIAANILG 287 (290)
T ss_pred -HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcce------eehhHHHHHHHHHHHHHHh
Confidence 999999999999 9999999999999999999999999999999998 8 99999999998875
No 59
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.75 E-value=5.1e-07 Score=82.44 Aligned_cols=138 Identities=15% Similarity=0.148 Sum_probs=100.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC--------CCCHHHH
Q 043160 8 AKPYLGVIFMQFCSSIMSIITKIALTQ------GMSQHVLVAYRMVVATSLIAPFAIVLERKTRP--------KMTFRIF 73 (333)
Q Consensus 8 ~~~~l~~~~~~~~~~~~~~~~k~~l~~------~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~--------~~~~~~~ 73 (333)
..|.+++++++++|+...+..|..+.+ +.++.....+-..++.++++|+....+..... ..+...+
T Consensus 193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~ 272 (350)
T PTZ00343 193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK 272 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence 469999999999999999999998532 25677666666788888888887644321100 0001011
Q ss_pred HHH---HHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHH
Q 043160 74 AKI---ALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCM 150 (333)
Q Consensus 74 ~~~---~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 150 (333)
... ...+.+...+.+.+.+++++++++...++...+.|+++.++++++++|+++..+ ++|.++++.|+.+.
T Consensus 273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~------~iG~~lii~Gv~lY 346 (350)
T PTZ00343 273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLG------YLGMAVAILGALLY 346 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHh------HHHHHHHHHHHHHH
Confidence 111 122222223334444579999999999999999999999999999999999998 99999999999885
Q ss_pred H
Q 043160 151 T 151 (333)
Q Consensus 151 ~ 151 (333)
.
T Consensus 347 s 347 (350)
T PTZ00343 347 S 347 (350)
T ss_pred h
Confidence 4
No 60
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.71 E-value=3.2e-09 Score=88.04 Aligned_cols=278 Identities=15% Similarity=0.167 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 043160 9 KPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQ 88 (333)
Q Consensus 9 ~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 88 (333)
..++.+++-++.||..+...... +-+|.+.+.. ..++++++....++.. .|..+.+.+...++.|.+. ..++
T Consensus 2 ~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lG-tT~GALifaiiv~~~~---~p~~T~~~~iv~~isG~~W-s~GQ 73 (288)
T COG4975 2 MDLLIALLPALGWGSIPLVANKF---GGKPYQQTLG-TTLGALIFAIIVFLFV---SPELTLTIFIVGFISGAFW-SFGQ 73 (288)
T ss_pred hhHHHHHHHHHHhcccceeeeec---CCChhHhhhh-ccHHHHHHHHHHheee---cCccchhhHHHHHHhhhHh-hhhh
Confidence 45788899999999998877644 3456666554 4444444444443332 2667778788888888888 9999
Q ss_pred HHHHHHhcccchhhHHHhh-chHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhh
Q 043160 89 NLYFTGLKCSTATFTVAMC-NILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRI 167 (333)
Q Consensus 89 ~~~~~al~~~~~~~~~~l~-~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~ 167 (333)
...+.|+++.+++.+.++. .++-+-+.+++.+.++|=-+..+. ..-.+++++.++|+.+-..+++++ .
T Consensus 74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~--IlG~iAliliviG~~lTs~~~~~n---------k 142 (288)
T COG4975 74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQI--ILGFIALILIVIGIYLTSKQDRNN---------K 142 (288)
T ss_pred hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhH--HHHHHHHHHHHHhheEeeeecccc---------c
Confidence 9999999999999999985 588899999999999997776540 011335556666776655332211 0
Q ss_pred hcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeec
Q 043160 168 LHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLH 247 (333)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (333)
..++. ++...|....+.+.+.|-.|.+..+...- |..+... -...+.+......-... . +..
T Consensus 143 -------~~~~~-~n~kkgi~~L~iSt~GYv~yvvl~~~f~v---~g~saiL-PqAiGMv~~ali~~~~~--~----~~~ 204 (288)
T COG4975 143 -------EEENP-SNLKKGIVILLISTLGYVGYVVLFQLFDV---DGLSAIL-PQAIGMVIGALILGFFK--M----EKR 204 (288)
T ss_pred -------cccCh-HhhhhheeeeeeeccceeeeEeeeccccc---cchhhhh-HHHHHHHHHHHHHhhcc--c----ccc
Confidence 01244 66779999999999999999888665431 1121111 12223232222221111 1 112
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhh----HHHHHHHhhhhhhe
Q 043160 248 FDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRI----VGAIVIVIGLYMVL 323 (333)
Q Consensus 248 ~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~----~G~~li~~g~~~~~ 323 (333)
.+...+.-...|+.-.++...+..+.++.+....=.+..+..+++.+-+.++++|+=|..++ +|.++++.|..+..
T Consensus 205 ~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg 284 (288)
T COG4975 205 FNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG 284 (288)
T ss_pred hHHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence 23334444566888888899999999999988888888889999999999999999888765 67888888766554
No 61
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.71 E-value=7.7e-07 Score=78.86 Aligned_cols=133 Identities=15% Similarity=0.215 Sum_probs=105.9
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 043160 8 AKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVA-YRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVI 86 (333)
Q Consensus 8 ~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~-~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 86 (333)
..|..+.+.++++|+...+..|... ..++..... +..........+. ...... ...+.+.+......|+++...
T Consensus 153 ~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~g~~~~~i 227 (292)
T COG0697 153 LLGLLLALAAALLWALYTALVKRLS--RLGPVTLALLLQLLLALLLLLLF--FLSGFG-APILSRAWLLLLYLGVFSTGL 227 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHH--Hhcccc-ccCCHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999999883 566666665 3333222222221 111111 334567788899999999778
Q ss_pred HHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160 87 GQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT 151 (333)
Q Consensus 87 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 151 (333)
++.++++++++.+++.++.+..+.|++..++++++++|+++..+ ++|.++.+.|+.+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~------~~G~~li~~g~~l~~ 286 (292)
T COG0697 228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQ------LLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999998 999999999999876
No 62
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.62 E-value=9.6e-07 Score=68.10 Aligned_cols=118 Identities=17% Similarity=0.174 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 043160 9 KPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQ 88 (333)
Q Consensus 9 ~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 88 (333)
+++++++++.++-+...++-|... ++.+....... . .. .+. . . ......+..|+...++++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~-~~~g~~~~~~~-~-~~--~~~--~---~---------~~p~~~i~lgl~~~~la~ 62 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGM-SRLPLLSHAWD-F-IA--ALL--A---F---------GLALRAVLLGLAGYALSM 62 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHH-hhCCCccchhH-H-HH--HHH--H---H---------hccHHHHHHHHHHHHHHH
Confidence 478899999999999999999995 44443322111 1 00 000 0 0 001225777888889999
Q ss_pred HHHHHHhcccchhhHHHhhchHHHHHHHHHHH--HhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160 89 NLYFTGLKCSTATFTVAMCNILPALTFLMAWI--FRLEKVKIKSMRSQAKILGTIVTAGGAMCMT 151 (333)
Q Consensus 89 ~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~--~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 151 (333)
.++.+++++.|++.+.++.+..+.++.+.++. ++||++|..+ ++|++++++|+.++.
T Consensus 63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~------~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKK------TLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHhc
Confidence 99999999999999999999999888888885 7999999997 999999999999976
No 63
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.53 E-value=1.9e-06 Score=77.18 Aligned_cols=144 Identities=12% Similarity=0.029 Sum_probs=114.0
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCH--HHHHHHHHHHHH
Q 043160 5 YHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTF--RIFAKIALLGLF 82 (333)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~ 82 (333)
.++.+|-++++.+++++|..+++-+.. .++.++.++...-.++++++..+.....+++...+.+| +.... .+...+
T Consensus 164 ~~~i~GDll~l~~a~lya~~nV~~E~~-v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~-~v~~~~ 241 (334)
T PF06027_consen 164 SNPILGDLLALLGAILYAVSNVLEEKL-VKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGL-LVGYAL 241 (334)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHh-cccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHH-HHHHHH
Confidence 357899999999999999999999998 57789999988888888888888877777765444333 33332 333333
Q ss_pred HHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCC
Q 043160 83 EPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGP 156 (333)
Q Consensus 83 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~ 156 (333)
.....+.+.-..+++++++...+=.-+..++..++.++++|+++++.. ++|.+++++|.++....+.+
T Consensus 242 ~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly------~~af~lIiiG~vvy~~~~~~ 309 (334)
T PF06027_consen 242 CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLY------ILAFALIIIGFVVYNLAESP 309 (334)
T ss_pred HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHH------HHHHHHHHHHhheEEccCCc
Confidence 336666677788899999887777788999999999999999999987 99999999999997654433
No 64
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.49 E-value=2.8e-06 Score=71.15 Aligned_cols=137 Identities=15% Similarity=0.130 Sum_probs=115.9
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 043160 7 HAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVI 86 (333)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 86 (333)
...|..+.+.+..+|+.+.+..|.. .+..+...-+.+-+.+++++.+|+-....... -..+.-...-+..++++.++
T Consensus 146 Dp~Gv~~Al~AG~~Wa~YIv~G~r~-g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~--l~~p~ll~laLgvavlSSal 222 (292)
T COG5006 146 DPVGVALALGAGACWALYIVLGQRA-GRAEHGTAGVAVGMLVAALIVLPIGAAQAGPA--LFSPSLLPLALGVAVLSSAL 222 (292)
T ss_pred CHHHHHHHHHHhHHHHHHHHHcchh-cccCCCchHHHHHHHHHHHHHhhhhhhhcchh--hcChHHHHHHHHHHHHhccc
Confidence 4578999999999999999999999 55566666677789999999999876433322 23455566778888999999
Q ss_pred HHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160 87 GQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL 152 (333)
Q Consensus 87 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 152 (333)
.+.+=..++++.|...-+++.++.|.+.++.++++++|++|..| |+++...+.+..-.++
T Consensus 223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~q------wlaI~~ViaAsaG~~l 282 (292)
T COG5006 223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQ------WLAIAAVIAASAGSTL 282 (292)
T ss_pred chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHH------HHHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999999999999997 9999998888775554
No 65
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.46 E-value=4.2e-07 Score=78.77 Aligned_cols=280 Identities=12% Similarity=0.132 Sum_probs=167.9
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHH
Q 043160 3 LQYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLF 82 (333)
Q Consensus 3 ~~~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 82 (333)
|+.....|..+.+.+.+..|....+-|+.+.+ .... -.+..+. +....+ -+....|.+
T Consensus 15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r-----------~~~~--------~~ra~~g-g~~yl~--~~~Ww~G~l 72 (335)
T KOG2922|consen 15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKR-----------AGAS--------GLRAGEG-GYGYLK--EPLWWAGML 72 (335)
T ss_pred hccCceeeeeehhhccEEEeeehhhhHHHHHH-----------Hhhh--------cccccCC-Ccchhh--hHHHHHHHH
Confidence 55666788888888888888888888888422 1100 0011111 111112 245567888
Q ss_pred HHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCc
Q 043160 83 EPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPW 162 (333)
Q Consensus 83 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~ 162 (333)
.+.++...-|.|+.+.|++..+++..++-+..++++..+++||++... .+|+.++++|..+++.- .|.+....
T Consensus 73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g------~lGc~l~v~Gst~iV~h-aP~e~~i~ 145 (335)
T KOG2922|consen 73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLG------ILGCVLCVVGSTTIVIH-APKEQEIE 145 (335)
T ss_pred HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhh------hhheeEEecccEEEEEe-cCcccccc
Confidence 889999999999999999999999999999999999999999999998 99999999999888632 23221111
Q ss_pred hhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHH--------HHHH-
Q 043160 163 KQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEG--------TILA- 233 (333)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~- 233 (333)
+.-+..+. ..+ .....- ...+...++.=.+ ..| +++. +.....|..+.+.+.. +..+
T Consensus 146 t~~el~~~------~~~-~~Fliy-~~~iil~~~il~~--~~~---p~~g-~tnilvyi~i~s~iGS~tV~svKalg~ai 211 (335)
T KOG2922|consen 146 SVEEVWEL------ATE-PGFLVY-VIIIILIVLILIF--FYA---PRYG-QTNILVYIGICSLIGSLTVMSVKALGIAI 211 (335)
T ss_pred cHHHHHHH------hcC-ccHHHH-HHHHHHHHHHHhe--eec---cccc-ccceeehhhHhhhhcceeeeeHHHHHHHH
Confidence 11111000 001 111111 1111111111111 111 1111 1112223333333211 1111
Q ss_pred -HhhccCCccceeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccch-hHHHHHHHHHHHhcccc--ch---
Q 043160 234 -LAIERGNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPL-SMVIIAILGSFFIAEEL--FL--- 306 (333)
Q Consensus 234 -~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-~pv~~~~~~~~~~~e~~--~~--- 306 (333)
....+ ..+. .....|..++.+..+...-..-.++|++..+++.++++.++ -..++++-+.++|+|-- +.
T Consensus 212 klt~~g--~~ql--~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i 287 (335)
T KOG2922|consen 212 KLTFSG--NNQL--FYPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDI 287 (335)
T ss_pred HHHhcC--Cccc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 11121 1222 22245666666555566667778899999999988888776 46667777888888863 22
Q ss_pred -hhhHHHHHHHhhhhhheecCCCC
Q 043160 307 -GRIVGAIVIVIGLYMVLWGRSKD 329 (333)
Q Consensus 307 -~~~~G~~li~~g~~~~~~~~~~~ 329 (333)
....|+..++.|+++....|+++
T Consensus 288 ~~~~~Gf~ti~~G~flL~~~kd~~ 311 (335)
T KOG2922|consen 288 AGELCGFVTIFLGIFLLHRTKDME 311 (335)
T ss_pred HHHHHhHHHhhheeeEeeeecccc
Confidence 45678899999999987766544
No 66
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.43 E-value=1.4e-06 Score=74.65 Aligned_cols=140 Identities=14% Similarity=0.175 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCcccee-eccchhHHHHHHHHHHH
Q 043160 184 TKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWL-LHFDAKLLSVLYGGFVS 262 (333)
Q Consensus 184 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~ 262 (333)
..|.++++.+-+.|+....+.|- .++. ++.....++.+.+............+ ...-.. ...+..+......++..
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kl-l~~~-~~~eIlahRviwS~~~~l~ll~~~r~-~~~~~~~~~~p~~~~~~~l~a~li 82 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKL-LEPL-PATEILAHRVIWSFPFMLALLFLLRQ-WRELKQLLKQPKTLLMLALTALLI 82 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHH-HccC-CHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHhCcHHHHHHHHHHHHH
Confidence 47999999999999998887765 5555 45778888888887766666555443 111111 12234566666667778
Q ss_pred HHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecC
Q 043160 263 CTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGR 326 (333)
Q Consensus 263 ~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~ 326 (333)
..-...+.+|.++....++|.-.+++|.+.+++|.++++|+++..|++..++..+|+....+..
T Consensus 83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~ 146 (293)
T COG2962 83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL 146 (293)
T ss_pred HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 8889999999999999999999999999999999999999999999999999999988776544
No 67
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.43 E-value=1.2e-06 Score=65.89 Aligned_cols=66 Identities=11% Similarity=0.067 Sum_probs=61.1
Q ss_pred HHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160 259 GFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW 324 (333)
Q Consensus 259 ~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~ 324 (333)
+++ ...++.++..++++.+.+++-.+.++.++.+.+.+++++||++++.+++|.+++++|++++..
T Consensus 43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 334 788999999999999999999999999999999999999999999999999999999987653
No 68
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=98.19 E-value=0.0015 Score=57.94 Aligned_cols=305 Identities=13% Similarity=0.089 Sum_probs=188.2
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH-HhhcC----CCCCCHHHHHHHH
Q 043160 3 LQYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIV-LERKT----RPKMTFRIFAKIA 77 (333)
Q Consensus 3 ~~~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~-~~~~~----~~~~~~~~~~~~~ 77 (333)
|+.+-..|+++..+.+++-|...+-.|.. ++.+-...-....+++.++ .|.... ..-+. ....+.+......
T Consensus 1 m~~~ii~Gii~h~iGg~~~~sfy~P~kkv--k~WsWEs~Wlv~gi~swli-~P~~~a~l~ip~~~~i~~~~~~~~l~~~~ 77 (344)
T PF06379_consen 1 MNSAIILGIIFHAIGGFASGSFYVPFKKV--KGWSWESYWLVQGIFSWLI-VPWLWALLAIPDFFSIYSATPASTLFWTF 77 (344)
T ss_pred CCchHHHHHHHHHHHHHHhhhhccchhhc--CCccHHHHHHHHHHHHHHH-HHHHHHHHhCCcHHHHHHhCChhHHHHHH
Confidence 55567789999999999999999999988 5566555544444444433 333322 11111 2234556788888
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhhHHHh-hchHHHHHHHHHHHHhccccc-eecccchhhHHHHHHHHHHHHHHHHhcC
Q 043160 78 LLGLFEPVIGQNLYFTGLKCSTATFTVAM-CNILPALTFLMAWIFRLEKVK-IKSMRSQAKILGTIVTAGGAMCMTLLKG 155 (333)
Q Consensus 78 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~~~e~~~-~~~~~~~~~~~g~~l~~~Gv~li~~~~~ 155 (333)
+.|++. ..+...|-.+++|+..+...-+ ..+...+-.++-.++.++--. ..++-.+.-++|++++++|+.++...+.
T Consensus 78 l~G~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~ 156 (344)
T PF06379_consen 78 LFGVLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGS 156 (344)
T ss_pred HHHHHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHH
Confidence 999998 9999999999999999987744 567777777777776543200 1122244569999999999999875432
Q ss_pred CcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHH------hhhCC-CchH----HHHHHHHH
Q 043160 156 PILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFL------LKSYP-AELS----LTALMCFV 224 (333)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~------~~~~~-~~~~----~~~~~~~~ 224 (333)
.++ .+. +.+... .+..+|.+.++.+++..|+.+.-.... ..... +|.. .....+.-
T Consensus 157 ~Ke----------~~~--~~~~~e-fn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~G 223 (344)
T PF06379_consen 157 MKE----------KEL--GEEAKE-FNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWG 223 (344)
T ss_pred hhh----------hhh--ccchhh-hhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhh
Confidence 111 100 111234 677899999999999999887654321 01111 1211 11222333
Q ss_pred HHHHHHHHHHhhcc--CCcc---cee---eccchhHHHHHHHHHHHHHHHHHHHHHHhhcCce----eeeeccchhHHHH
Q 043160 225 SSVEGTILALAIER--GNTG---IWL---LHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPV----FVSSFNPLSMVII 292 (333)
Q Consensus 225 ~~~~~~~~~~~~~~--~~~~---~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~----~~~~~~~~~pv~~ 292 (333)
+.+.-....+.... .+.. +.. .+...+...-+..|++-...+++|..+-.+.++. --.+.+.+..+++
T Consensus 224 Gf~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~s 303 (344)
T PF06379_consen 224 GFITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFS 303 (344)
T ss_pred HHHHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHH
Confidence 34444444433211 0111 111 1112345555556666777788888888777743 3456677788888
Q ss_pred HHHHHHHhccc------cchhhhHHHHHHHhhhhhheec
Q 043160 293 AILGSFFIAEE------LFLGRIVGAIVIVIGLYMVLWG 325 (333)
Q Consensus 293 ~~~~~~~~~e~------~~~~~~~G~~li~~g~~~~~~~ 325 (333)
-+.+. .++|- .-..-+.|+++++.++.++-.+
T Consensus 304 nvwGl-~lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~G 341 (344)
T PF06379_consen 304 NVWGL-ILKEWKGASKKTIRVLVLGIAVLILSVVIVGYG 341 (344)
T ss_pred HHHHH-HHHHhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence 88886 57773 2234578888888887776544
No 69
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.11 E-value=6.2e-05 Score=65.05 Aligned_cols=134 Identities=18% Similarity=0.126 Sum_probs=95.5
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHH
Q 043160 5 YHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEP 84 (333)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 84 (333)
.+..++++..+++++.+..+....|.. +.+|....+=. .++.++...+.....++ +...+..++-.+.|++.
T Consensus 134 ~~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPq-aiGm~i~a~i~~~~~~~---~~~~k~~~~nil~G~~w- 205 (269)
T PF06800_consen 134 SNMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQ-AIGMLIGAFIFNLFSKK---PFFEKKSWKNILTGLIW- 205 (269)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHH-HHHHHHHHHHHhhcccc---cccccchHHhhHHHHHH-
Confidence 356789999999999999999998875 36776665543 34433333332222221 22223345567888888
Q ss_pred HHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHH
Q 043160 85 VIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAM 148 (333)
Q Consensus 85 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ 148 (333)
..++.+++.+.+....+.+..+.++.+++..+-+.+++||+=++|| -..-++|+++.++|.+
T Consensus 206 ~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke--~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 206 GIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKE--MIYTLIGLILIVIGAI 267 (269)
T ss_pred HHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhh--HHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999988776 1122345555555544
No 70
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=98.10 E-value=1.4e-06 Score=73.52 Aligned_cols=135 Identities=13% Similarity=0.208 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHHHH
Q 043160 184 TKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSC 263 (333)
Q Consensus 184 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 263 (333)
..|..+..++ ..+...++..++.++. +|+......+..-.+...|..+...+ . ...+...-..++.=|+.+.
T Consensus 37 ~~gl~l~~vs-~ff~~~~vv~t~~~e~--~p~e~a~~r~l~~mlit~pcliy~~~-~----v~gp~g~R~~LiLRg~mG~ 108 (346)
T KOG4510|consen 37 NLGLLLLTVS-YFFNSCMVVSTKVLEN--DPMELASFRLLVRMLITYPCLIYYMQ-P----VIGPEGKRKWLILRGFMGF 108 (346)
T ss_pred ccCceehhhH-HHHhhHHHhhhhhhcc--ChhHhhhhhhhhehhhhheEEEEEee-e----eecCCCcEEEEEeehhhhh
Confidence 4777777777 7777777777776665 45666666666666666666554332 1 1111111222344566688
Q ss_pred HHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecC
Q 043160 264 TAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGR 326 (333)
Q Consensus 264 ~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~ 326 (333)
.+....++++++.+-+.++++....|+++.+++|++++|+.|....+|..+.+.|++++.+.+
T Consensus 109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp 171 (346)
T KOG4510|consen 109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP 171 (346)
T ss_pred hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence 888999999999999999999999999999999999999999999999999999999998654
No 71
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.02 E-value=2.8e-05 Score=69.12 Aligned_cols=118 Identities=19% Similarity=0.225 Sum_probs=89.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCC-chHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHH
Q 043160 181 EHITKGALMIAAGCFSWSCFIILEAFLLKSYPA-ELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGG 259 (333)
Q Consensus 181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 259 (333)
.+...|..+++.++++.+....++|+..++.+. +.. + +....+...+..| +.|
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~--------------------~--~~~~~~~l~~~~W----~~G 56 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLR--------------------A--GSGGRSYLRRPLW----WIG 56 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc--------------------c--cchhhHHHhhHHH----HHH
Confidence 567799999999999999999999998777642 010 0 0000000011112 233
Q ss_pred HH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160 260 FV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW 324 (333)
Q Consensus 260 ~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~ 324 (333)
++ ..++..+.+.|+...+++.++++..+..++..+++..+++|+++...+.|+++++.|..+...
T Consensus 57 ~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 57 LLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred HHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence 44 566677888999999999999999999999999999999999999999999999999776553
No 72
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=98.01 E-value=0.00011 Score=65.82 Aligned_cols=126 Identities=15% Similarity=0.111 Sum_probs=97.0
Q ss_pred HHHHHHHHHHHhhhCC-C--chHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHHHHHHHHHHHHHH
Q 043160 197 WSCFIILEAFLLKSYP-A--ELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLM 273 (333)
Q Consensus 197 ~a~~~v~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~ 273 (333)
+..+.+.+++..++.. . +...++.++....+...+....... .. +....+......+++..++..+.+.++
T Consensus 12 ~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~al 85 (303)
T PF08449_consen 12 CCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF--PK----SRKIPLKKYAILSFLFFLASVLSNAAL 85 (303)
T ss_pred HHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc--cC----CCcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345567777766543 3 6678888888887777666654321 11 112334445566777888899999999
Q ss_pred hhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCCC
Q 043160 274 KRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRSK 328 (333)
Q Consensus 274 ~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~ 328 (333)
++.+.....+.....|+..+++++++++++.+..++.+.+++.+|+++....+.+
T Consensus 86 ~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~ 140 (303)
T PF08449_consen 86 KYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSS 140 (303)
T ss_pred HhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccc
Confidence 9999999999999999999999999999999999999999999999998876543
No 73
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.98 E-value=1.2e-05 Score=59.83 Aligned_cols=110 Identities=14% Similarity=0.239 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043160 15 IFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTG 94 (333)
Q Consensus 15 ~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a 94 (333)
++.+++||.++++.|.. .++.++..-.. |..-....++ .+++ +.+.=+++ -.+...|++.
T Consensus 2 l~Vg~~WG~Tnpfik~g-~~~~~~~~~~~-~~~~~~~~Ll-------------~n~~----y~ipf~lN-q~GSv~f~~~ 61 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRG-SSGLEKVKASL-QLLQEIKFLL-------------LNPK----YIIPFLLN-QSGSVLFFLL 61 (113)
T ss_pred eeehHHhcCchHHHHHH-HhhcCCccchH-HHHHHHHHHH-------------HhHH----HHHHHHHH-HHHHHHHHHH
Confidence 35678999999999999 56555444331 3211111100 1122 22222333 6678899999
Q ss_pred hcccchhhHHHh-hchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHH
Q 043160 95 LKCSTATFTVAM-CNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCM 150 (333)
Q Consensus 95 l~~~~~~~~~~l-~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 150 (333)
+.+.|.+.+.++ +++.=++|++.++++.+|..+++. ++|+.+.++|+.++
T Consensus 62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~------~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRT------WLGMALILAGVALC 112 (113)
T ss_pred HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhH------HHHHHHHHcCeeee
Confidence 999999999999 588999999999888777777776 99999999998753
No 74
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.93 E-value=0.0001 Score=55.83 Aligned_cols=67 Identities=18% Similarity=0.385 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHhhcCceeeeec-cchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCCC
Q 043160 262 SCTAYFIMGWLMKRKGPVFVSSF-NPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRSK 328 (333)
Q Consensus 262 ~~~~~~~~~~a~~~~~~~~~~~~-~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~ 328 (333)
...+++++..++++.+.+.+=.+ .-+..+.+.+.+++++||++++.+++|+++|++|++......++
T Consensus 40 ~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~~ 107 (120)
T PRK10452 40 ISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTRK 107 (120)
T ss_pred HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCCC
Confidence 88899999999999988665444 56788889999999999999999999999999999998765543
No 75
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.92 E-value=0.00017 Score=56.49 Aligned_cols=131 Identities=15% Similarity=0.119 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHHHHHHH
Q 043160 187 ALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTAY 266 (333)
Q Consensus 187 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 266 (333)
.++++.++.+-++....+.++.++..+|....++.+..+.+.........++ . +........|+... -|+++...-
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~-~--~~~~~~~~p~w~~l-GG~lG~~~V 78 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGR-P--SLASLSSVPWWAYL-GGLLGVFFV 78 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcc-c--ccchhccCChHHhc-cHHHHHHHH
Confidence 5778889999999999999999988778999999999999988888876654 2 22222223344443 577788888
Q ss_pred HHHHHHHhhcCceeeeeccc-hhHHHHHHHHHH----HhccccchhhhHHHHHHHhhhhh
Q 043160 267 FIMGWLMKRKGPVFVSSFNP-LSMVIIAILGSF----FIAEELFLGRIVGAIVIVIGLYM 321 (333)
Q Consensus 267 ~~~~~a~~~~~~~~~~~~~~-~~pv~~~~~~~~----~~~e~~~~~~~~G~~li~~g~~~ 321 (333)
.+.....++.+++....+.. -+.+.+.+++.+ .-++++++.+.+|.+++++|+++
T Consensus 79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 88899999999876665544 467777777875 23566999999999999999864
No 76
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.85 E-value=0.00016 Score=53.97 Aligned_cols=66 Identities=17% Similarity=0.345 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHhhcCceeeeec-cchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCC
Q 043160 262 SCTAYFIMGWLMKRKGPVFVSSF-NPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRS 327 (333)
Q Consensus 262 ~~~~~~~~~~a~~~~~~~~~~~~-~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~ 327 (333)
..+++.++..++++.+.+.+=.. .-+..+.+.+.++++|||++++.+++|+++|++|++..+..++
T Consensus 40 ~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~~ 106 (110)
T PRK09541 40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLSR 106 (110)
T ss_pred HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 78889999999999888655333 5578888999999999999999999999999999999876553
No 77
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.84 E-value=0.00042 Score=51.58 Aligned_cols=64 Identities=16% Similarity=0.201 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHhcccchhhHHHh-hchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHH
Q 043160 81 LFEPVIGQNLYFTGLKCSTATFTVAM-CNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCM 150 (333)
Q Consensus 81 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 150 (333)
......++++...++++.|.+.+..+ .....+.+.+.+++++||++|..+ ++++.+.+.|++.+
T Consensus 42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~------~~gi~lIi~GVi~l 106 (109)
T PRK10650 42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKG------WIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHh
Confidence 34448889999999999999999876 568999999999999999999997 99999999999885
No 78
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.75 E-value=0.00074 Score=52.84 Aligned_cols=130 Identities=12% Similarity=0.054 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 043160 11 YLGVIFMQFCSSIMSIITKIALTQGMS-QHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQN 89 (333)
Q Consensus 11 ~l~~~~~~~~~~~~~~~~k~~l~~~~~-~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 89 (333)
.++.+++..+-+....++-.. .+..+ |...++..+..+.+.+..+....+++..+..+ +..++....|+++ +....
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L-~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~-~~p~w~~lGG~lG-~~~V~ 79 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQL-GKALGSPLVASFISFGVGFILLLIILLITGRPSLASLS-SVPWWAYLGGLLG-VFFVL 79 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhc-cCChHHhccHHHH-HHHHH
Confidence 456777777788888777777 56565 99999999999999998887776654333222 2344556688888 99999
Q ss_pred HHHHHhcccchhhHHHhhc-hHHHHHHHHHHH----HhccccceecccchhhHHHHHHHHHHHHH
Q 043160 90 LYFTGLKCSTATFTVAMCN-ILPALTFLMAWI----FRLEKVKIKSMRSQAKILGTIVTAGGAMC 149 (333)
Q Consensus 90 ~~~~al~~~~~~~~~~l~~-~~pi~~~ll~~~----~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 149 (333)
+..+..++.+++.+..+.- -+-+...++-.+ .-+++++.++ ++|+++.++|+.+
T Consensus 80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r------~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRR------ILGLALMIAGVIL 138 (138)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHH------HHHHHHHHHHHhC
Confidence 9999999999999887754 455555666664 2556666665 9999999999863
No 79
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.73 E-value=0.00018 Score=54.55 Aligned_cols=68 Identities=15% Similarity=0.076 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHhcccchhhHHHhh-chHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160 79 LGLFEPVIGQNLYFTGLKCSTATFTVAMC-NILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL 152 (333)
Q Consensus 79 ~g~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 152 (333)
..+...+.+.+++..++++.|.+.+..+. ...-+.+.+++.+++||++|..+ ++|+.+.++|++.+-.
T Consensus 35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~------~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMK------IAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHhhc
Confidence 34555588999999999999999999885 69999999999999999999997 9999999999988753
No 80
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.71 E-value=0.0002 Score=52.46 Aligned_cols=67 Identities=18% Similarity=0.137 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHhcccchhhHHHh-hchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160 79 LGLFEPVIGQNLYFTGLKCSTATFTVAM-CNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT 151 (333)
Q Consensus 79 ~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 151 (333)
....+...++.++-.++++.|.+.+..+ .....+.+++.+++++||+++..+ ++++.+.++|++.+-
T Consensus 35 l~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~------~~gl~LiiaGvi~Lk 102 (106)
T COG2076 35 LTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIK------LLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHH------HHHHHHHHHHHHHhh
Confidence 3344458889999999999999998866 679999999999999999999997 999999999999864
No 81
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.71 E-value=0.00023 Score=53.19 Aligned_cols=66 Identities=15% Similarity=0.260 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHhcccchhhHHHh-hchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160 80 GLFEPVIGQNLYFTGLKCSTATFTVAM-CNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT 151 (333)
Q Consensus 80 g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 151 (333)
.+.....+..++..++++.|.+.+..+ .....+.+.+++++++||++|..+ ++|+.+.++|++++-
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~------~~gi~lIi~GVi~l~ 102 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLVIN 102 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHh
Confidence 455558889999999999999999987 568999999999999999999997 999999999999985
No 82
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=97.59 E-value=0.00024 Score=63.11 Aligned_cols=137 Identities=12% Similarity=0.187 Sum_probs=112.7
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHH---hcCCCHHHHHHHHHHHHHHHHH-HHHHHHhhcCC---C--CCCHHHHHHHH
Q 043160 7 HAKPYLGVIFMQFCSSIMSIITKIAL---TQGMSQHVLVAYRMVVATSLIA-PFAIVLERKTR---P--KMTFRIFAKIA 77 (333)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~~~~~k~~l---~~~~~~~~~~~~r~~~~~~~l~-~~~~~~~~~~~---~--~~~~~~~~~~~ 77 (333)
...|+..++.+.+..+...++.|..+ .+++++.....+.--++...++ |+....+.... . ..+.. .....
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~ 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILL 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHH
Confidence 45799999999999999999999997 3468999999888888888888 88776555443 1 22333 33334
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160 78 LLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT 151 (333)
Q Consensus 78 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 151 (333)
+.+++. ...|...|..+.++++-.-++....--+++...++++++|++|..+ ..|..++++|+.+-.
T Consensus 240 ~~sv~~-f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n------~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 240 LNSVLA-FLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLN------ALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHH-HHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhh------HHHHHHHHHHHHHHH
Confidence 444666 7788899999999999999999999999999999999999999998 999999999999954
No 83
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.58 E-value=0.00041 Score=51.34 Aligned_cols=65 Identities=11% Similarity=0.082 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHhcccchhhHHHh-hchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160 81 LFEPVIGQNLYFTGLKCSTATFTVAM-CNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT 151 (333)
Q Consensus 81 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 151 (333)
+.+...++++...++++.|.+.+..+ .....+.+.+.+.+++||++|..+ ++++.+.++|++.+-
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~------~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPAR------LLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHhhh
Confidence 44458889999999999999998876 558999999999999999999997 999999999999864
No 84
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.58 E-value=0.0007 Score=50.38 Aligned_cols=64 Identities=11% Similarity=0.178 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHhhcCcee-eeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhe
Q 043160 260 FVSCTAYFIMGWLMKRKGPVF-VSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVL 323 (333)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~ 323 (333)
+...+++++...++|+.|.+. .++..-+..+.+.+.+++++||++++.+++|+++|+.|++..+
T Consensus 43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 337888999999999988844 4566667888899999999999999999999999999998764
No 85
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.54 E-value=0.00094 Score=52.28 Aligned_cols=140 Identities=15% Similarity=0.084 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHHHHH
Q 043160 185 KGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCT 264 (333)
Q Consensus 185 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 264 (333)
...+.+++++.+-.+......++.+..++|....+..+..+.+.+..+.++.++ ..++.......|+... -|+++.+
T Consensus 5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~--~~~~a~~~~~pwW~~~-GG~lGa~ 81 (150)
T COG3238 5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQG--HPGLAAVASAPWWAWI-GGLLGAI 81 (150)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcC--CCchhhccCCchHHHH-ccchhhh
Confidence 566788889999999999999988888889999999999999988888877443 3333222223344443 3555555
Q ss_pred HHHHHHHHHhhcCce-eeeeccchhHHHHHHHHHHHhc----cccchhhhHHHHHHHhhhhhheecCC
Q 043160 265 AYFIMGWLMKRKGPV-FVSSFNPLSMVIIAILGSFFIA----EELFLGRIVGAIVIVIGLYMVLWGRS 327 (333)
Q Consensus 265 ~~~~~~~a~~~~~~~-~~~~~~~~~pv~~~~~~~~~~~----e~~~~~~~~G~~li~~g~~~~~~~~~ 327 (333)
--+.......+.+++ .....-.-+.+.+.+.+.+=+. .+++..++.|++++++|+++..++++
T Consensus 82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~~ 149 (150)
T COG3238 82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFGA 149 (150)
T ss_pred hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccccc
Confidence 445555566666653 4444555677778887776443 45999999999999999766665543
No 86
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.54 E-value=0.0003 Score=52.03 Aligned_cols=65 Identities=18% Similarity=0.246 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHhhcCcee-eeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheec
Q 043160 261 VSCTAYFIMGWLMKRKGPVF-VSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWG 325 (333)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~~-~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~ 325 (333)
+...++++...++|+.|.+. .++..-+..+.+.+.+++++||++++.+++|++++++|++..+..
T Consensus 38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~ 103 (105)
T PRK11431 38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS 103 (105)
T ss_pred HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence 37888999999999988744 466666888999999999999999999999999999999987644
No 87
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.51 E-value=0.00023 Score=52.14 Aligned_cols=67 Identities=16% Similarity=0.284 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHhhcCce-eeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecC
Q 043160 260 FVSCTAYFIMGWLMKRKGPV-FVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGR 326 (333)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~ 326 (333)
++...++.+...++|+.+.+ ..++..-+..+.+.+.++++|||+.++.+++|..++++|++..+...
T Consensus 38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s 105 (106)
T COG2076 38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS 105 (106)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence 33778899999999998874 45677778889999999999999999999999999999999877654
No 88
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=97.24 E-value=0.0026 Score=56.79 Aligned_cols=142 Identities=11% Similarity=0.136 Sum_probs=114.0
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHHHHhh---cCCCCCCHHHHHHHHHH
Q 043160 6 HHAKPYLGVIFMQFCSSIMSIITKIALTQ---GMSQHVLVAYRMVVATSLIAPFAIVLER---KTRPKMTFRIFAKIALL 79 (333)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~~~~~k~~l~~---~~~~~~~~~~r~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~ 79 (333)
|...|-++.+++++++|...++.|.-..+ .++-..+..+-.++..++++|..+.... ++.+-++..+...++..
T Consensus 244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~ 323 (416)
T KOG2765|consen 244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN 323 (416)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence 56789999999999999999999987432 3666666677788888888877665433 22233344556678888
Q ss_pred HHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHh
Q 043160 80 GLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLL 153 (333)
Q Consensus 80 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~ 153 (333)
+.++.+++.+++..|.-.+++-.+++-..++.....+.-.++.+.+++... ++|.+.+++|-+++...
T Consensus 324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~------iiGsi~Ifv~Fv~vn~~ 391 (416)
T KOG2765|consen 324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALY------IIGSIPIFVGFVIVNIS 391 (416)
T ss_pred hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHhheecc
Confidence 999999999999999999999999998887777788888888788888886 99999999999988743
No 89
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=97.19 E-value=0.0044 Score=53.43 Aligned_cols=185 Identities=9% Similarity=0.041 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 043160 10 PYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQN 89 (333)
Q Consensus 10 ~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 89 (333)
|+++.+++.+++|.+++-.|.. +. -|++.+-++.+....+.-+.+...+.. | +..++.++.|.+. +.++.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~-~~-gDg~~fQw~~~~~i~~~g~~v~~~~~~---p----~f~p~amlgG~lW-~~gN~ 70 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKF-DT-GDGFFFQWVMCSGIFLVGLVVNLILGF---P----PFYPWAMLGGALW-ATGNI 70 (254)
T ss_pred CchhHHHHHHHhcccceeeEec-cC-CCcHHHHHHHHHHHHHHHHHHHHhcCC---C----cceeHHHhhhhhh-hcCce
Confidence 5678899999999999999988 44 578877777666555555544433221 2 2345567777887 99999
Q ss_pred HHHHHhcccchhhHHHhhchHHHHHH-HHHHH-HhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCC--ch--
Q 043160 90 LYFTGLKCSTATFTVAMCNILPALTF-LMAWI-FRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFP--WK-- 163 (333)
Q Consensus 90 ~~~~al~~~~~~~~~~l~~~~pi~~~-ll~~~-~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~--~~-- 163 (333)
+-.-.++....+....+.++.-+.+- ..+++ +++++...- ..+....+|++++++|..+..+-+.++.+.. .+
T Consensus 71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~ 149 (254)
T PF07857_consen 71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET 149 (254)
T ss_pred eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence 99999999999999999776555443 33333 344433322 2345568899999999888755432221100 00
Q ss_pred --hhh-hhcccCC----CCC------CCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 043160 164 --QVR-ILHNQSE----TGT------HNKEEHITKGALMIAAGCFSWSCFIILEAF 206 (333)
Q Consensus 164 --~~~-~~~~~~~----~~~------~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~ 206 (333)
..+ .++.+++ .++ +.. ++...|..+++.+++.|+...+=...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~S~vd~l~~~-~~RivG~~LAv~aGvlyGs~fvPv~Y 204 (254)
T PF07857_consen 150 PLSIEDVIEIEDDSENSEDSSWVDELSPR-KKRIVGIILAVFAGVLYGSNFVPVIY 204 (254)
T ss_pred ccccccccccccccccccccccccccccc-cchhHhHHHHHHHHHHHhcccchHHH
Confidence 000 0000000 000 112 25778999999999999987654444
No 90
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.19 E-value=0.0011 Score=57.35 Aligned_cols=79 Identities=10% Similarity=0.151 Sum_probs=71.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCCC
Q 043160 250 AKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRSK 328 (333)
Q Consensus 250 ~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~ 328 (333)
........-+++..+...+.+.++++.+|+...++...+.+++.++++++++++++..||.+..+.++|+.+.......
T Consensus 15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 3455666778888899999999999999999999999999999999999999999999999999999999998865543
No 91
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.14 E-value=0.0031 Score=45.76 Aligned_cols=57 Identities=14% Similarity=0.039 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHhcccchhhHHHh-hchHHHHHHHHHHHHhccccceecccchhhHHHHHH
Q 043160 80 GLFEPVIGQNLYFTGLKCSTATFTVAM-CNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIV 142 (333)
Q Consensus 80 g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l 142 (333)
.+.....+..++..++++.|.+.+..+ ..+..+.+.+.+.+++||++|..+ +.|+.+
T Consensus 35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~------~~gi~l 92 (93)
T PF00893_consen 35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSK------WLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------Hhheee
Confidence 344558889999999999999999876 469999999999999999999997 988876
No 92
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.13 E-value=0.0024 Score=46.35 Aligned_cols=55 Identities=20% Similarity=0.389 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHhhcCceee-eeccchhHHHHHHHHHHHhccccchhhhHHHHHH
Q 043160 261 VSCTAYFIMGWLMKRKGPVFV-SSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVI 315 (333)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~~~-~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li 315 (333)
+.+.++.++.+++|+.+.+.+ .+..-+..+...+.+.+++||++|+.+++|+.+|
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 378888999999999998777 4556688999999999999999999999999876
No 93
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.06 E-value=0.036 Score=50.09 Aligned_cols=145 Identities=14% Similarity=0.083 Sum_probs=91.8
Q ss_pred cccHHHHHHHHHHHHHHHHH-------HHHHHHHhcCCCHHHHHHHHHH---HHHHHHH-HHHHHH--hhcCC-----CC
Q 043160 6 HHAKPYLGVIFMQFCSSIMS-------IITKIALTQGMSQHVLVAYRMV---VATSLIA-PFAIVL--ERKTR-----PK 67 (333)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~~-------~~~k~~l~~~~~~~~~~~~r~~---~~~~~l~-~~~~~~--~~~~~-----~~ 67 (333)
+..||++.++++.+..+..+ +..+.+...+.++.....-.+. ++..+.- .++.++ +++.. ++
T Consensus 171 ~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~ 250 (345)
T PRK13499 171 NLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFS 250 (345)
T ss_pred chHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhcc
Confidence 45799999999999999998 6666543346666655544443 3333332 222222 11111 11
Q ss_pred CCHHHHHHH----HHHHHHHHHHHHHHHHHHhcccchhhHHH---hh-chHHHHHHHHHHHHhccccceecccchhhHHH
Q 043160 68 MTFRIFAKI----ALLGLFEPVIGQNLYFTGLKCSTATFTVA---MC-NILPALTFLMAWIFRLEKVKIKSMRSQAKILG 139 (333)
Q Consensus 68 ~~~~~~~~~----~~~g~~~~~~~~~~~~~al~~~~~~~~~~---l~-~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g 139 (333)
.+++.+.+- .+.|++. ..++.++..+-+..+.+.+.. +. ++..++..+-+. ++||+=+..++..+.-++|
T Consensus 251 ~~~~~~~~n~l~~~l~G~~W-~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G 328 (345)
T PRK13499 251 LAKPLLITNVLLSALAGVMW-YLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLG 328 (345)
T ss_pred ccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHH
Confidence 121222333 6666676 888888888888876665555 65 555566677777 5899988545556666889
Q ss_pred HHHHHHHHHHHHH
Q 043160 140 TIVTAGGAMCMTL 152 (333)
Q Consensus 140 ~~l~~~Gv~li~~ 152 (333)
+++.+.|..++.+
T Consensus 329 ~vliI~g~~lig~ 341 (345)
T PRK13499 329 CVVIILAANIVGL 341 (345)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988763
No 94
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.93 E-value=0.026 Score=44.31 Aligned_cols=137 Identities=14% Similarity=0.007 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 043160 9 KPYLGVIFMQFCSSIMSIITKIALTQGM-SQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIG 87 (333)
Q Consensus 9 ~~~l~~~~~~~~~~~~~~~~k~~l~~~~-~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 87 (333)
...+..+.+..+-.....++-.. .+.. +|....+..+..+...+..+.+...++......++..+|....|+++ +..
T Consensus 5 l~ll~~i~aG~~l~~Q~~iN~qL-~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~~ 82 (150)
T COG3238 5 LYLLFAILAGALLPLQAAINGRL-ARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AIF 82 (150)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHH-HHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hhh
Confidence 45666677777777766666666 3444 48888899999988888888777444333332344466677778777 777
Q ss_pred HHHHHHHhcccchhhHHHhh-chHHHHHHHHHHHH-hccccceecccchhhHHHHHHHHHHHHHH
Q 043160 88 QNLYFTGLKCSTATFTVAMC-NILPALTFLMAWIF-RLEKVKIKSMRSQAKILGTIVTAGGAMCM 150 (333)
Q Consensus 88 ~~~~~~al~~~~~~~~~~l~-~~~pi~~~ll~~~~-~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 150 (333)
-+.......+..++....+. .-+-+...++-.+= ++++ +++....|++|+++.++|+.++
T Consensus 83 vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~---~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 83 VTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVP---KRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred hhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCC---cCCCCHHHHHHHHHHHHHHHHh
Confidence 77777788888777666553 33444444443322 2222 2233455699999999995554
No 95
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.89 E-value=0.0012 Score=55.49 Aligned_cols=134 Identities=13% Similarity=0.074 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHHHHHH
Q 043160 186 GALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTA 265 (333)
Q Consensus 186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 265 (333)
..+.+++-++.|+.......|. -++|...+--+.+-+.++.....++ .. +.. ....+..-...|++-.++
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~-~~-p~~-----T~~~~iv~~isG~~Ws~G 72 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLF-VS-PEL-----TLTIFIVGFISGAFWSFG 72 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHhee-ec-Ccc-----chhhHHHHHHhhhHhhhh
Confidence 4678888899999876664332 2245544444444444444444433 22 111 223455555567777788
Q ss_pred HHHHHHHHhhcCceeeeeccch-hHHHHHHHHHHHhccccchhhh----HHHHHHHhhhhhheecCCCC
Q 043160 266 YFIMGWLMKRKGPVFVSSFNPL-SMVIIAILGSFFIAEELFLGRI----VGAIVIVIGLYMVLWGRSKD 329 (333)
Q Consensus 266 ~~~~~~a~~~~~~~~~~~~~~~-~pv~~~~~~~~~~~e~~~~~~~----~G~~li~~g~~~~~~~~~~~ 329 (333)
+..++++.+..+.+++.++..- +.+-+.+++++.|||..+..+. +..++++.|+++..++++.+
T Consensus 73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~n 141 (288)
T COG4975 73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNN 141 (288)
T ss_pred hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccc
Confidence 9999999999999999998764 6777889999999999888765 45778889999999887643
No 96
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.44 E-value=0.011 Score=44.12 Aligned_cols=108 Identities=13% Similarity=0.090 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHH-HHHHHHHHH
Q 043160 192 AGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFV-SCTAYFIMG 270 (333)
Q Consensus 192 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~ 270 (333)
+.+++|++.+-+.|+..+..+++.... +....... +. ..|-+. ..+. ...+...|+
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~~--~~~~~~~~-----Ll--------------~n~~y~--ipf~lNq~GSv~f~ 59 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGLEKVKASL--QLLQEIKF-----LL--------------LNPKYI--IPFLLNQSGSVLFF 59 (113)
T ss_pred eehHHhcCchHHHHHHHhhcCCccchH--HHHHHHHH-----HH--------------HhHHHH--HHHHHHHHHHHHHH
Confidence 457889999999999888775433220 11111111 00 112222 2444 778888999
Q ss_pred HHHhhcCceeeeec-cchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhh
Q 043160 271 WLMKRKGPVFVSSF-NPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMV 322 (333)
Q Consensus 271 ~a~~~~~~~~~~~~-~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~ 322 (333)
+.+.+.+.+.+.++ +.+.-+++.+.++++.+|..++..++|+.++++|+.+.
T Consensus 60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 99999999999999 59999999999987777778889999999999998653
No 97
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.30 E-value=0.017 Score=49.20 Aligned_cols=62 Identities=18% Similarity=0.082 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHH
Q 043160 80 GLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAM 148 (333)
Q Consensus 80 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ 148 (333)
.+.+ +....+..+.+++.+....+....+.++++.+++.++++|+++..+ ++|+.+.+.|+.
T Consensus 159 ~~~~-a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~------~~g~~lV~~~~~ 220 (222)
T TIGR00803 159 GLLN-VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTF------YLGAILVFLATF 220 (222)
T ss_pred HHHH-HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHH------HHHHHHHHeeeE
Confidence 3444 7778889999999999999999999999999999999999999997 999999888764
No 98
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=96.13 E-value=0.088 Score=45.99 Aligned_cols=141 Identities=13% Similarity=0.111 Sum_probs=110.9
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-----CCCHHHHHHHHH
Q 043160 5 YHHAKPYLGVIFMQFCSSIMSIITKIALTQ-GMSQHVLVAYRMVVATSLIAPFAIVLERKTRP-----KMTFRIFAKIAL 78 (333)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~-~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~ 78 (333)
.+...|+.++....+.-|..+..-+..+.+ .+++..+.++-.++..+.-........ ..++ +..++.++-+++
T Consensus 168 ~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg-~~~~av~F~~~hp~~~~Di~l 246 (327)
T KOG1581|consen 168 ENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQG-HLLPAVSFIKEHPDVAFDILL 246 (327)
T ss_pred CCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCC-CCchHHHHHHcChhHHHHHHH
Confidence 456789999999999888888887777633 588888888888887777665533222 1111 223456777899
Q ss_pred HHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHh
Q 043160 79 LGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLL 153 (333)
Q Consensus 79 ~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~ 153 (333)
.+.++ +.++.+.++-++.-++-.-+.+..+-=++..+++.+.++.+++..+ |+|+.+.+.|+.+=.+.
T Consensus 247 ~s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q------~~g~~iVFg~i~l~~~~ 314 (327)
T KOG1581|consen 247 YSTCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQ------WLGVLIVFGGIFLEILL 314 (327)
T ss_pred HHHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhh------ccCeeeehHHHHHHHHH
Confidence 99999 8889999988988888888888888999999999999999999997 99999999998886543
No 99
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.02 E-value=0.0049 Score=54.04 Aligned_cols=119 Identities=21% Similarity=0.213 Sum_probs=92.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHH
Q 043160 181 EHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGF 260 (333)
Q Consensus 181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 260 (333)
++...|..+++.+.+.-+...++.||..++... ...-..+ +...+ .. + ...+.|+
T Consensus 17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~------------------~~~ra~~-gg~~y--l~-~---~~Ww~G~ 71 (335)
T KOG2922|consen 17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA------------------SGLRAGE-GGYGY--LK-E---PLWWAGM 71 (335)
T ss_pred cCceeeeeehhhccEEEeeehhhhHHHHHHHhh------------------hcccccC-CCcch--hh-h---HHHHHHH
Confidence 456689999999999999999998888777531 0001111 11111 11 1 2335677
Q ss_pred H-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160 261 V-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW 324 (333)
Q Consensus 261 ~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~ 324 (333)
+ ..++-...+.+....+++.++++..++.+.+.+++..+++|++++...+|+++.++|-..+..
T Consensus 72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ 136 (335)
T KOG2922|consen 72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI 136 (335)
T ss_pred HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence 7 889999999999999999999999999999999999999999999999999999999665554
No 100
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=95.98 E-value=0.48 Score=42.47 Aligned_cols=142 Identities=12% Similarity=0.030 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCC---CchHHHHHHHHHHHHHHHHHHHhhccC--C--cc---ceeeccchhHHH
Q 043160 185 KGALMIAAGCFSWSCFIILEAFLLKSYP---AELSLTALMCFVSSVEGTILALAIERG--N--TG---IWLLHFDAKLLS 254 (333)
Q Consensus 185 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~---~~~~~~~~~~~~ 254 (333)
.-.+..+...+-++......|...++.+ .|-+..+..-+.-.+.+....+.-++. + .. ......+.+..-
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 4444555555556666655666544432 234445555555555555555433210 0 00 111111223344
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecC
Q 043160 255 VLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGR 326 (333)
Q Consensus 255 l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~ 326 (333)
+..-+++..+-..+++.++.+.+|+...+...+....+.++..+++++++++.||...++...|+...+.+.
T Consensus 95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~ 166 (345)
T KOG2234|consen 95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPS 166 (345)
T ss_pred HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccC
Confidence 445555666667799999999999999999999999999999999999999999999999999999998443
No 101
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=95.82 E-value=0.023 Score=41.11 Aligned_cols=113 Identities=14% Similarity=0.191 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHH
Q 043160 11 YLGVIFMQFCSSIMSIITKIALTQGMSQH------VLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEP 84 (333)
Q Consensus 11 ~l~~~~~~~~~~~~~~~~k~~l~~~~~~~------~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 84 (333)
..-++...++||.++++.|.. +.+.+.. ...++|-.... -.+|+++.+ +++.
T Consensus 5 ~~~lvaVgllWG~Tnplirrg-s~g~~~v~~~~~k~~~~lqe~~tl----------------~l~w~Y~iP-FllN---- 62 (125)
T KOG4831|consen 5 MDKLVAVGLLWGATNPLIRRG-SLGWDKVKSSSRKIMIALQEMKTL----------------FLNWEYLIP-FLLN---- 62 (125)
T ss_pred HHHHHHHHHHHccccHHHHHH-HhhHhhccCchHHHHHHHHHHHHH----------------HHhHHHHHH-HHHH----
Confidence 345677889999999999988 4443322 22222221111 112333333 2233
Q ss_pred HHHHHHHHHHhcccchhhHHHhh-chHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160 85 VIGQNLYFTGLKCSTATFTVAMC-NILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT 151 (333)
Q Consensus 85 ~~~~~~~~~al~~~~~~~~~~l~-~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 151 (333)
-.+..+||.-+++.|.+.+..+. ++.-.|+.+.+..+ ||+...+. .++|..+.++|+.+..
T Consensus 63 qcgSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~-----a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 63 QCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGL-----ALLGTSLIVFGIWLCI 124 (125)
T ss_pred HhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccce-----eehhhhHHhhhhhhee
Confidence 34477888899999999999884 57888888888877 55554433 3999999999988753
No 102
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.21 E-value=0.15 Score=42.93 Aligned_cols=137 Identities=12% Similarity=0.066 Sum_probs=94.8
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHh-hcCC----CCCCHHHHHHHHHHH
Q 043160 7 HAKPYLGVIFMQFCSSIMSIITKIAL-TQGMSQHVLVAYRMVVATSLIAPFAIVLE-RKTR----PKMTFRIFAKIALLG 80 (333)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~~~~~k~~l-~~~~~~~~~~~~r~~~~~~~l~~~~~~~~-~~~~----~~~~~~~~~~~~~~g 80 (333)
...|-++.+++...-|++...-...- +.+-+...+.++-.+-+.+.+-.-.++.. -+.. .+. ...++.+.+.+
T Consensus 170 ~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~Rh-P~~~~~l~l~a 248 (337)
T KOG1580|consen 170 FGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRH-PYVFWDLTLLA 248 (337)
T ss_pred cchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhc-cHHHHHHHHHH
Confidence 34677888888888887777655441 11223333334444444444322211111 0000 011 24467788888
Q ss_pred HHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160 81 LFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT 151 (333)
Q Consensus 81 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 151 (333)
+++ ++++++.+.-..+-++-..+++..+--.|+.+.+.++++.+++.+| |+|.++.+.|...=.
T Consensus 249 i~s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQ------wlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 249 IAS-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQ------WLGTVLVFSALTADV 312 (337)
T ss_pred HHH-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHHhhhHh
Confidence 888 9999999999999999999999999999999999999999999997 999999998877643
No 103
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=94.91 E-value=0.33 Score=42.83 Aligned_cols=137 Identities=12% Similarity=0.117 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC-----CC-CCCHHHHHHHHHHHH
Q 043160 9 KPYLGVIFMQFCSSIMSIITKIALT-QGMSQHVLVAYRMVVATSLIAPFAIVLERKT-----RP-KMTFRIFAKIALLGL 81 (333)
Q Consensus 9 ~~~l~~~~~~~~~~~~~~~~k~~l~-~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~-----~~-~~~~~~~~~~~~~g~ 81 (333)
.|+.++....+.-+...+..|+..+ .+.+-..+.++..+.+.+.+.......+... .+ ......+....+.++
T Consensus 157 ~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv 236 (314)
T KOG1444|consen 157 RGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCV 236 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHH
Confidence 4788888888888888888888753 3577788899999999888887765433211 11 112344666777788
Q ss_pred HHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160 82 FEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL 152 (333)
Q Consensus 82 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 152 (333)
++ ..-+++.+++.+..++...++.....-..+.+...++.+++.++.. .+|+.++++|-++-.+
T Consensus 237 ~g-f~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n------~~gll~~~~ggv~Y~~ 300 (314)
T KOG1444|consen 237 MG-FGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLN------VIGLLVGFFGGVLYSY 300 (314)
T ss_pred HH-HHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhh------hHHHHHHhhhhhHHhh
Confidence 87 7778888899999999988888877777788888888999999997 9999999999988654
No 104
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=94.79 E-value=0.015 Score=47.31 Aligned_cols=67 Identities=15% Similarity=0.247 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCCCC
Q 043160 263 CTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRSKD 329 (333)
Q Consensus 263 ~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~ 329 (333)
..+.+.|..++++.+++.++.+...+-.+..+++++++|+++...+++..++.+.|++++.+...+.
T Consensus 64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~ 130 (290)
T KOG4314|consen 64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH 130 (290)
T ss_pred ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh
Confidence 4567889999999999999999999999999999999999999999999999999999988655443
No 105
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=94.19 E-value=0.4 Score=40.07 Aligned_cols=136 Identities=12% Similarity=0.120 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC----CCCHHHHHHHHHHHHHHH
Q 043160 10 PYLGVIFMQFCSSIMSIITKIAL-TQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRP----KMTFRIFAKIALLGLFEP 84 (333)
Q Consensus 10 ~~l~~~~~~~~~~~~~~~~k~~l-~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~ 84 (333)
|++++....+.-+..-...|.-. -.+..-++..++..+.+.++++.+....+.+... ..+.....+.++.|++.
T Consensus 156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s- 234 (309)
T COG5070 156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS- 234 (309)
T ss_pred ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH-
Confidence 34444444444344344444331 1345677888999999999999888776654322 23444566778888887
Q ss_pred HHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160 85 VIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL 152 (333)
Q Consensus 85 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 152 (333)
+.-.++--|.++-++.+..+....+.-.-.++.+.++++|+.|... +.++.+.+....+-..
T Consensus 235 vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~s------i~sillGflsg~iYav 296 (309)
T COG5070 235 VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLS------IFSILLGFLSGAIYAV 296 (309)
T ss_pred hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHH------HHHHHHHHHHHHHHHH
Confidence 7778888999999999999999999988999999999999999887 9999998776666543
No 106
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=93.50 E-value=0.49 Score=41.55 Aligned_cols=126 Identities=13% Similarity=0.172 Sum_probs=88.2
Q ss_pred HHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCcc-ceeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceee
Q 043160 203 LEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTG-IWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFV 281 (333)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~ 281 (333)
+.++..+..+=|+-.+.++..+-...........+...+. .-...+....-.++-.|+++..-..+-++++++.+.+..
T Consensus 34 ~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlY 113 (349)
T KOG1443|consen 34 YFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLY 113 (349)
T ss_pred HhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeee
Confidence 3444444455577677776666555444444443331111 111222223333445566688888889999999999999
Q ss_pred eeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCCC
Q 043160 282 SSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRSK 328 (333)
Q Consensus 282 ~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~ 328 (333)
++..+..+++..+++.++-=|++.|.-..=..+|-+|+++..+.+.+
T Consensus 114 TM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTq 160 (349)
T KOG1443|consen 114 TMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQ 160 (349)
T ss_pred eeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccc
Confidence 99999999999999999999999999988888899999988876643
No 107
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=90.70 E-value=1.2 Score=39.99 Aligned_cols=142 Identities=16% Similarity=0.058 Sum_probs=84.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhcc-CCccc-eeeccchhHHHHHHH
Q 043160 181 EHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIER-GNTGI-WLLHFDAKLLSVLYG 258 (333)
Q Consensus 181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~l~~~ 258 (333)
.+...|.++..+++++.+.+.+=.|| .|+. + .+.......+-+-+..|.....-. ++..+ ....+...+......
T Consensus 3 ~~ii~Gii~h~iGg~~~~sfy~P~kk-vk~W-s-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~ 79 (344)
T PF06379_consen 3 SAIILGIIFHAIGGFASGSFYVPFKK-VKGW-S-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLF 79 (344)
T ss_pred chHHHHHHHHHHHHHHhhhhccchhh-cCCc-c-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence 46679999999999999999888777 5555 2 333333222222333343322211 02111 112222445555566
Q ss_pred HHHHHHHHHHHHHHHhhcCceee-eeccchhHHHHHHHHHHHhcc-------ccchhhhHHHHHHHhhhhhheec
Q 043160 259 GFVSCTAYFIMGWLMKRKGPVFV-SSFNPLSMVIIAILGSFFIAE-------ELFLGRIVGAIVIVIGLYMVLWG 325 (333)
Q Consensus 259 ~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~pv~~~~~~~~~~~e-------~~~~~~~~G~~li~~g~~~~~~~ 325 (333)
|++-.++-..|..++++++.+.. ++..-+..+++.++--++.|+ +-....++|.++.++|+.+..+.
T Consensus 80 G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A 154 (344)
T PF06379_consen 80 GVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA 154 (344)
T ss_pred HHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence 88888888999999999887543 223333445555554444332 22346789999999999888753
No 108
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=89.97 E-value=0.43 Score=41.27 Aligned_cols=130 Identities=11% Similarity=0.108 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHHHHHH
Q 043160 186 GALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTA 265 (333)
Q Consensus 186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 265 (333)
|.+.+++|+++++-..+=.||.-. .|++...++++....+.........+. ..+ +..-...|.+-+.+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~--gDg~~fQw~~~~~i~~~g~~v~~~~~~---p~f-------~p~amlgG~lW~~g 68 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDT--GDGFFFQWVMCSGIFLVGLVVNLILGF---PPF-------YPWAMLGGALWATG 68 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccC--CCcHHHHHHHHHHHHHHHHHHHHhcCC---Ccc-------eeHHHhhhhhhhcC
Confidence 456788889999888877665432 266777777666665555555543221 121 11122234445555
Q ss_pred HHHHHHHHhhcCceeeee-ccchhHHHHHHHHHH-Hhccc-----cchhhhHHHHHHHhhhhhheecCC
Q 043160 266 YFIMGWLMKRKGPVFVSS-FNPLSMVIIAILGSF-FIAEE-----LFLGRIVGAIVIVIGLYMVLWGRS 327 (333)
Q Consensus 266 ~~~~~~a~~~~~~~~~~~-~~~~~pv~~~~~~~~-~~~e~-----~~~~~~~G~~li~~g~~~~~~~~~ 327 (333)
..+-.-.++..+-...-. -...+.+.+-..+.+ +||++ -.++.++|++++++|..+...-|.
T Consensus 69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~ 137 (254)
T PF07857_consen 69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKS 137 (254)
T ss_pred ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecC
Confidence 666666666665543332 234466666666654 55553 345788999999999887765443
No 109
>PRK02237 hypothetical protein; Provisional
Probab=87.08 E-value=3 Score=30.64 Aligned_cols=46 Identities=7% Similarity=0.084 Sum_probs=39.2
Q ss_pred eeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCC
Q 043160 282 SSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRS 327 (333)
Q Consensus 282 ~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~ 327 (333)
+...-+-.+.+.++.+.+-|++|+...++|.++.++|+.++.+.+|
T Consensus 63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR 108 (109)
T PRK02237 63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR 108 (109)
T ss_pred HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence 4455667788889999999999999999999999999988876654
No 110
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=86.95 E-value=1.1 Score=38.85 Aligned_cols=142 Identities=20% Similarity=0.150 Sum_probs=96.7
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHhh----cCCCCC-CHHHHHHHHHHH
Q 043160 7 HAKPYLGVIFMQFCSSIMSIITKIALTQ-GMSQHVLVAYRMVVATSLIAPFAIVLER----KTRPKM-TFRIFAKIALLG 80 (333)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~~~~~k~~l~~-~~~~~~~~~~r~~~~~~~l~~~~~~~~~----~~~~~~-~~~~~~~~~~~g 80 (333)
...|.++...+.+.-+.+.+.+|..+.. +=.-..++++..+.+.++++|.....+. ...+.. .++.|....+.|
T Consensus 183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg 262 (347)
T KOG1442|consen 183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG 262 (347)
T ss_pred chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence 3578999999999999999999977532 2234667888999999999998775332 223343 345566666667
Q ss_pred HHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcC
Q 043160 81 LFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKG 155 (333)
Q Consensus 81 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~ 155 (333)
+++ ..-++.-.+=++-++|-.--+=...-...=.+++..+++|..+... |-+-++..+|...-+..++
T Consensus 263 lfg-F~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lw------wtsn~~vLvgs~~YT~vk~ 330 (347)
T KOG1442|consen 263 LFG-FAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLW------WTSNIVVLVGSLAYTLVKE 330 (347)
T ss_pred HHH-HHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhhe------eeeeEEEEehhHHHHHHHH
Confidence 776 3333333444555555443333333445556788899999998886 8899999999988776543
No 111
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=84.84 E-value=0.11 Score=44.21 Aligned_cols=136 Identities=15% Similarity=0.138 Sum_probs=96.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhh-CCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHH
Q 043160 181 EHITKGALMIAAGCFSWSCFIILEAFLLKS-YPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGG 259 (333)
Q Consensus 181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 259 (333)
.+..+|..++-.-+.|-......+..+.++ .+.|...++.....-+++..++..+-. ... ...|..-+.++
T Consensus 14 kk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~----~~~----~~~~~hYilla 85 (336)
T KOG2766|consen 14 KKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR----KYI----KAKWRHYILLA 85 (336)
T ss_pred hhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh----HHH----HHHHHHhhhee
Confidence 344444444433333333333344444444 445788888888777777777775421 111 12344455567
Q ss_pred HHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160 260 FVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW 324 (333)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~ 324 (333)
++..=+.++..+|.|+.+-+.++.+..-..+...+++|++++.+--+.++.|.++-+.|++++..
T Consensus 86 ~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~ 150 (336)
T KOG2766|consen 86 FVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVF 150 (336)
T ss_pred EEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEE
Confidence 77778888889999999999999999999999999999999999999999999999999887764
No 112
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=84.07 E-value=1.3 Score=38.58 Aligned_cols=67 Identities=9% Similarity=0.176 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160 258 GGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW 324 (333)
Q Consensus 258 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~ 324 (333)
-+++-..+..+.+.++...+++.-.++.-...++.-+++.-+++.+++..||.|+..+.+|++.+-.
T Consensus 92 Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~ 158 (372)
T KOG3912|consen 92 PALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS 158 (372)
T ss_pred hHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence 4666677788888999999999999999999999999999999999999999999999999877654
No 113
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=83.55 E-value=11 Score=32.92 Aligned_cols=139 Identities=11% Similarity=0.105 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC-----CCCCCHHHHHHHHHHHHH
Q 043160 9 KPYLGVIFMQFCSSIMSIITKIAL-TQGMSQHVLVAYRMVVATSLIAPFAIVLERKT-----RPKMTFRIFAKIALLGLF 82 (333)
Q Consensus 9 ~~~l~~~~~~~~~~~~~~~~k~~l-~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~ 82 (333)
.|...+-.+.++-+...-+-..++ ...-+..+++++...++.++++........-. -.+.+++.....++.+..
T Consensus 190 ~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~ 269 (367)
T KOG1582|consen 190 IGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLA 269 (367)
T ss_pred eeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHH
Confidence 344444444444443333332222 12345567777777777777665544322111 124567777888888887
Q ss_pred HHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhc
Q 043160 83 EPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLK 154 (333)
Q Consensus 83 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~ 154 (333)
+ .++......-++.-++..++.+...--..|.+++++++..++|... .-+..+.+.|+.+=.+.+
T Consensus 270 g-ylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy------~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 270 G-YLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQY------VWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred h-HhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHH------hhhhHHHHHHHHhhcccC
Confidence 7 6676666666666788888888888889999999999999999887 788888889998866443
No 114
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=83.55 E-value=2 Score=31.47 Aligned_cols=43 Identities=14% Similarity=0.192 Sum_probs=36.7
Q ss_pred cchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCC
Q 043160 285 NPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRS 327 (333)
Q Consensus 285 ~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~ 327 (333)
.-+-.+.+.+.++.+-|++|+...++|.++.++|+.++.+.+|
T Consensus 64 GGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 64 GGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred hhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 3345567888999999999999999999999999998887765
No 115
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=82.90 E-value=1.4 Score=32.15 Aligned_cols=32 Identities=19% Similarity=0.403 Sum_probs=27.4
Q ss_pred HHHHHHHHhccccchhhhHHHHHHHhhhhhhe
Q 043160 292 IAILGSFFIAEELFLGRIVGAIVIVIGLYMVL 323 (333)
Q Consensus 292 ~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~ 323 (333)
-..++.++++|++++..+.|.++++++++.+.
T Consensus 76 F~~Fsv~~l~E~l~~n~l~af~~i~~av~fiF 107 (108)
T PF04342_consen 76 FAPFSVFYLGEPLKWNYLWAFLCILGAVYFIF 107 (108)
T ss_pred eHHHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence 34567889999999999999999999987654
No 116
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=82.47 E-value=5.4 Score=29.17 Aligned_cols=62 Identities=15% Similarity=0.187 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHhhcCceeeeecc-chhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhe
Q 043160 262 SCTAYFIMGWLMKRKGPVFVSSFN-PLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVL 323 (333)
Q Consensus 262 ~~~~~~~~~~a~~~~~~~~~~~~~-~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~ 323 (333)
...+..+|+.-+++.+-+...++. ++.-.++.+.+...-.|......+.|..++++|+.+..
T Consensus 62 NqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 62 NQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred HHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 455566788888888888777665 45778888889865555577888999999999988753
No 117
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=78.60 E-value=0.72 Score=40.48 Aligned_cols=112 Identities=11% Similarity=0.069 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhc------C-------CCCCCHHHHHHHHHHH
Q 043160 14 VIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERK------T-------RPKMTFRIFAKIALLG 80 (333)
Q Consensus 14 ~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~------~-------~~~~~~~~~~~~~~~g 80 (333)
|+++.+|||.+...-|.+ ++.-...+.+.+-+.++.++...+....... . ..+.++......+..|
T Consensus 1 M~itmlcwGSW~nt~kL~-~r~gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLA-ERRGRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHH-HhcCCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 467889999999999999 4533333344555555555554443221111 1 1234556666677777
Q ss_pred HHHHHHHHHHHHHHhcccchhhHHHhhchHHH-HHHHHHHHHhccccce
Q 043160 81 LFEPVIGQNLYFTGLKCSTATFTVAMCNILPA-LTFLMAWIFRLEKVKI 128 (333)
Q Consensus 81 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi-~~~ll~~~~~~e~~~~ 128 (333)
++. .+++.+..+|+.....+.+-++..-..+ .-+.+.+ ++..|.++
T Consensus 80 vvf-nlgNillq~aia~aGmSVafpvg~glalVlGv~~NY-fld~~~n~ 126 (336)
T PF07168_consen 80 VVF-NLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNY-FLDPKINR 126 (336)
T ss_pred Hhh-hhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeee-eccCCCCC
Confidence 777 8899999999999999988887543333 3333333 34566653
No 118
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=77.05 E-value=4.5 Score=35.21 Aligned_cols=68 Identities=19% Similarity=0.189 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHhh-cCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCCCC
Q 043160 262 SCTAYFIMGWLMKR-KGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRSKD 329 (333)
Q Consensus 262 ~~~~~~~~~~a~~~-~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~ 329 (333)
-+....+.+++++. ++.-.-.++....++..+..++++.|.+-+..|+...+++-+|++..+..+.++
T Consensus 74 FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d 142 (330)
T KOG1583|consen 74 FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKD 142 (330)
T ss_pred eeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcc
Confidence 45557788888886 677888899999999999999999999999999999999999999988766554
No 119
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=76.29 E-value=5.6 Score=28.59 Aligned_cols=35 Identities=17% Similarity=0.380 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160 290 VIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW 324 (333)
Q Consensus 290 v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~ 324 (333)
.+-..++.+.++|.+.+..+.|..++.+|++.+.+
T Consensus 81 ~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr 115 (116)
T COG3169 81 AIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR 115 (116)
T ss_pred HHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence 34456788999999999999999999999988765
No 120
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=74.21 E-value=13 Score=27.08 Aligned_cols=48 Identities=10% Similarity=0.086 Sum_probs=39.9
Q ss_pred eeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCCC
Q 043160 281 VSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRSK 328 (333)
Q Consensus 281 ~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~ 328 (333)
.+...-+..+.+..+.+++-|..|+...+.|.++-++|+.++...++.
T Consensus 61 YAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR~ 108 (109)
T COG1742 61 YAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPRG 108 (109)
T ss_pred HHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCCC
Confidence 344566678888899999999999999999999999998888777653
No 121
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=64.62 E-value=54 Score=24.12 Aligned_cols=31 Identities=10% Similarity=0.090 Sum_probs=22.7
Q ss_pred HHHHHHHHHHhccccceecccchhhHHHHHHHHHHHH
Q 043160 112 ALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAM 148 (333)
Q Consensus 112 i~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ 148 (333)
..-+.++.+++||++++.. +.|-+..+.++.
T Consensus 74 ~vF~~Fsv~~l~E~l~~n~------l~af~~i~~av~ 104 (108)
T PF04342_consen 74 VVFAPFSVFYLGEPLKWNY------LWAFLCILGAVY 104 (108)
T ss_pred heeHHHHHHHhCCCccHHH------HHHHHHHHHhhh
Confidence 3446788899999999997 776666655544
No 122
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=63.07 E-value=89 Score=26.08 Aligned_cols=30 Identities=10% Similarity=0.077 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccchhh
Q 043160 72 IFAKIALLGLFEPVIGQNLYFTGLKCSTATF 102 (333)
Q Consensus 72 ~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~ 102 (333)
.++..++.++.. ...+...+...+..|+..
T Consensus 145 ~~~k~~~~~~~~-~~~w~~~~~~~~~lp~~i 174 (206)
T PF06570_consen 145 SWWKYILISVLA-MVLWIVIFVLTSFLPPVI 174 (206)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHccccC
Confidence 344444444444 344444454555556553
No 123
>PRK02237 hypothetical protein; Provisional
Probab=60.82 E-value=66 Score=23.81 Aligned_cols=49 Identities=12% Similarity=0.125 Sum_probs=38.2
Q ss_pred cchhhHHHh-hchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160 98 STATFTVAM-CNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL 152 (333)
Q Consensus 98 ~~~~~~~~l-~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 152 (333)
.+.+.+-.- .....+...+..+..-|+|+++.+ ++|..++++|+.++.+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D------~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWD------WIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhH------HHhHHHHHHhHHHhee
Confidence 334444433 456677777889999999999998 9999999999998864
No 124
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=55.45 E-value=16 Score=26.95 Aligned_cols=52 Identities=12% Similarity=0.162 Sum_probs=40.8
Q ss_pred hcccchhhHHHh-hchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160 95 LKCSTATFTVAM-CNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL 152 (333)
Q Consensus 95 l~~~~~~~~~~l-~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 152 (333)
++-.+.+.+-.- .....+...+..+.+-|+|+++.+ ++|..++++|+.++.+
T Consensus 51 l~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D------~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 51 LQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWD------WIGAAICLVGVAIILF 103 (107)
T ss_pred cCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHH------HHhHHHHHHhHHheEe
Confidence 444445544433 457778888889999999999998 9999999999999874
No 125
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=49.81 E-value=13 Score=32.94 Aligned_cols=131 Identities=10% Similarity=0.041 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHH-HhhccCC---cccee------eccchhHHHHHHHHH
Q 043160 191 AAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILA-LAIERGN---TGIWL------LHFDAKLLSVLYGGF 260 (333)
Q Consensus 191 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~------~~~~~~~~~l~~~~~ 260 (333)
+++.+||+-+...+|-.-++.+.|. .+.|=+.++.+....+. +-....+ +...+ ..+..........|+
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR~~q-h~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGv 80 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGRLPQ-HFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGV 80 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCCccc-eehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhH
Confidence 4567888888888887666554332 23333344433332222 2222111 11111 111122333334455
Q ss_pred HHHHHHHHHHHHHhhcCceeeeeccc-hhHHHHHHHHHHHhccccc--hhhhHHHHHHHhhhhhhe
Q 043160 261 VSCTAYFIMGWLMKRKGPVFVSSFNP-LSMVIIAILGSFFIAEELF--LGRIVGAIVIVIGLYMVL 323 (333)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~~~~~~~~-~~pv~~~~~~~~~~~e~~~--~~~~~G~~li~~g~~~~~ 323 (333)
+-.++..+..++....+.++.-++.. +.-++++++.|+ ++.+.+ ..-+.|..++++++++-.
T Consensus 81 vfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 81 VFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred hhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHH
Confidence 57778888899998888877766653 345556666764 345444 355678888888776644
No 126
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=46.73 E-value=46 Score=24.38 Aligned_cols=40 Identities=10% Similarity=0.226 Sum_probs=32.9
Q ss_pred hchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160 107 CNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL 152 (333)
Q Consensus 107 ~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 152 (333)
.....+...+..+..-|.++++.+ ++|..++++|+.++.+
T Consensus 65 GGvyI~~sL~W~~~Vdg~~pdr~D------~~Ga~icl~G~~vil~ 104 (109)
T COG1742 65 GGVYIAASLAWLWVVDGVRPDRYD------WIGAAICLAGVAVILF 104 (109)
T ss_pred cchHHHHHHHHHHHHcCcCCcHHH------hhhHHHHHhceeeeEe
Confidence 456667777788888888888888 9999999999888764
No 127
>PF06166 DUF979: Protein of unknown function (DUF979); InterPro: IPR009323 This family consists of several putative bacterial membrane proteins. The function of this family is unclear.
Probab=40.95 E-value=2.4e+02 Score=25.13 Aligned_cols=23 Identities=9% Similarity=-0.032 Sum_probs=14.3
Q ss_pred hccccceecccchhhHHHHHHHHHHHHHHH
Q 043160 122 RLEKVKIKSMRSQAKILGTIVTAGGAMCMT 151 (333)
Q Consensus 122 ~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 151 (333)
+|+++... +.|+.+...++.-..
T Consensus 44 ~G~~lp~~-------~~G~lvl~m~~la~~ 66 (308)
T PF06166_consen 44 FGDYLPPF-------VVGILVLVMALLAGF 66 (308)
T ss_pred cCccchhH-------HHHHHHHHHHHHHHc
Confidence 45555544 778777766665543
No 128
>PF12292 DUF3624: Protein of unknown function (DUF3624); InterPro: IPR022072 This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length. There is a conserved GRC sequence motif.
Probab=36.19 E-value=1.3e+02 Score=20.79 Aligned_cols=46 Identities=7% Similarity=0.085 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Q 043160 13 GVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIV 59 (333)
Q Consensus 13 ~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~ 59 (333)
+.+++.+.|.+...+.+-- ...+.+..+.+.-+.++.++++-+..+
T Consensus 25 LtvLs~~~w~iWw~~f~d~-P~sieSIALl~~~~AfsgLL~lHLvv~ 70 (77)
T PF12292_consen 25 LTVLSVLSWPIWWFFFRDT-PTSIESIALLFFCFAFSGLLFLHLVVF 70 (77)
T ss_pred HHHHHHHHHHHHHHHHcCC-cchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677888888888888855 455666666666666666666655443
No 129
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=35.97 E-value=12 Score=32.64 Aligned_cols=32 Identities=6% Similarity=0.083 Sum_probs=0.0
Q ss_pred hcccchhhHHHhhchHHHHHHHHHH-HHhcccc
Q 043160 95 LKCSTATFTVAMCNILPALTFLMAW-IFRLEKV 126 (333)
Q Consensus 95 l~~~~~~~~~~l~~~~pi~~~ll~~-~~~~e~~ 126 (333)
++-.+-+...++++...+.++++-. .++|+|+
T Consensus 44 msd~t~~a~~vl~sfAvvliiIIiIImlF~RrL 76 (381)
T PF05297_consen 44 MSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRL 76 (381)
T ss_dssp ---------------------------------
T ss_pred HhccccchHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3333444444555544444433333 3355544
No 130
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=35.41 E-value=46 Score=18.45 Aligned_cols=21 Identities=14% Similarity=0.154 Sum_probs=10.7
Q ss_pred cchhhhHHHHHHHhhhhhhee
Q 043160 304 LFLGRIVGAIVIVIGLYMVLW 324 (333)
Q Consensus 304 ~~~~~~~G~~li~~g~~~~~~ 324 (333)
-.+..++|.+++..+.++..+
T Consensus 10 ~~~~~~~G~~l~~~~~~~~~~ 30 (34)
T TIGR01167 10 NSLLLLLGLLLLGLGGLLLRK 30 (34)
T ss_pred cHHHHHHHHHHHHHHHHHhee
Confidence 445566777455444443333
No 131
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=29.40 E-value=14 Score=28.79 Aligned_cols=20 Identities=10% Similarity=0.067 Sum_probs=11.2
Q ss_pred eeeeccchhHHHHHHHHHHH
Q 043160 280 FVSSFNPLSMVIIAILGSFF 299 (333)
Q Consensus 280 ~~~~~~~~~pv~~~~~~~~~ 299 (333)
.++.+.|+.|.++++++.+.
T Consensus 76 ~sA~LvYi~PL~~l~v~~~L 95 (150)
T COG3086 76 KSALLVYIFPLVGLFLGAIL 95 (150)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34445566666666665543
No 132
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=28.30 E-value=55 Score=19.44 Aligned_cols=19 Identities=47% Similarity=1.064 Sum_probs=11.1
Q ss_pred HHHHHHHhhhhhheecCCC
Q 043160 310 VGAIVIVIGLYMVLWGRSK 328 (333)
Q Consensus 310 ~G~~li~~g~~~~~~~~~~ 328 (333)
+|.++++.+.+++.+.+++
T Consensus 21 V~vI~~vl~~~l~~~~rR~ 39 (40)
T PF08693_consen 21 VGVIIIVLGAFLFFWYRRK 39 (40)
T ss_pred hHHHHHHHHHHhheEEecc
Confidence 4555666666676655443
No 133
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=26.55 E-value=5.8e+02 Score=24.49 Aligned_cols=114 Identities=9% Similarity=0.011 Sum_probs=56.1
Q ss_pred hcccchhhHHHhhchHHHHHHHHHHHH----hccccceecccchhhHHH-HHHHHHHHHHHHHhcCCcccCCchhhhhhc
Q 043160 95 LKCSTATFTVAMCNILPALTFLMAWIF----RLEKVKIKSMRSQAKILG-TIVTAGGAMCMTLLKGPILEFPWKQVRILH 169 (333)
Q Consensus 95 l~~~~~~~~~~l~~~~pi~~~ll~~~~----~~e~~~~~~~~~~~~~~g-~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~ 169 (333)
..=.+++.+..+....=++-++...+. -+.| +++.|+++..+.| +-++++.+++-. .|+.
T Consensus 42 v~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~-~r~GrfRP~lL~g~ip~~i~~~l~F~---~p~~----------- 106 (467)
T COG2211 42 VFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTR-SRWGRFRPWLLWGAIPFAIVAVLLFI---TPDF----------- 106 (467)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHhcchheeeecccc-cccccccHHHHHHhHHHHHHHHHHHc---CCCc-----------
Confidence 333477777777666555555544443 3444 4444445544555 555555554443 2211
Q ss_pred ccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHH----HHHHhhhCCCchHHHHHHHHHHHHHHHH
Q 043160 170 NQSETGTHNKEEHITKGALMIAAGCFSWSCFIIL----EAFLLKSYPAELSLTALMCFVSSVEGTI 231 (333)
Q Consensus 170 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (333)
+.. .........-.+-.++|.+-++= .-...++..+...+..|++..+.+....
T Consensus 107 -------~~~-~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l 164 (467)
T COG2211 107 -------SMT-GKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLL 164 (467)
T ss_pred -------ccC-cchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 122 33444444444445677664332 2222233223455677777766554333
No 134
>PF11361 DUF3159: Protein of unknown function (DUF3159); InterPro: IPR016566 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. However, they are predicted to be integral membrane proteins (with several transmembrane segments).
Probab=25.95 E-value=3.8e+02 Score=22.12 Aligned_cols=43 Identities=16% Similarity=0.096 Sum_probs=24.0
Q ss_pred hHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160 102 FTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT 151 (333)
Q Consensus 102 ~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 151 (333)
..+++....-......-.+..||+++.. +.|.+-..++..+..
T Consensus 28 ~~aliaA~~~a~~~~v~RL~r~~~~~~a-------~~gl~gV~i~a~~A~ 70 (187)
T PF11361_consen 28 TPALIAALAVAVVIVVWRLVRRESVQPA-------LSGLFGVAISAAIAW 70 (187)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCccHHH-------HHHHHHHHHHHHHHH
Confidence 3444445555555566667777777643 555555555554443
No 135
>PF08802 CytB6-F_Fe-S: Cytochrome B6-F complex Fe-S subunit ; InterPro: IPR014909 The cytochrome b6-f complex mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. The cytochrome b6-f complex has 4 large subunits, these are: cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are: PetG, PetL, PetM and PetN. The complex functions as a dimer. This protein corresponds to the alpha helical transmembrane domain of the cytochrome b6-f complex Rieske iron-sulphur subunit. ; GO: 0009496 plastoquinol-plastocyanin reductase activity, 0051537 2 iron, 2 sulfur cluster binding, 0055114 oxidation-reduction process, 0042651 thylakoid membrane; PDB: 1Q90_R 1VF5_D 2E75_D 2E74_D 2E76_D 2D2C_Q 2ZT9_D.
Probab=25.01 E-value=1.2e+02 Score=17.85 Aligned_cols=30 Identities=27% Similarity=0.246 Sum_probs=19.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043160 66 PKMTFRIFAKIALLGLFEPVIGQNLYFTGL 95 (333)
Q Consensus 66 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~al 95 (333)
|..+||+...+++.|.........++=+.-
T Consensus 4 Pdm~RR~lmN~ll~Gava~~a~~~lyP~~~ 33 (39)
T PF08802_consen 4 PDMSRRQLMNLLLGGAVAVPAGGMLYPYVK 33 (39)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHhhHHHHHHHHhhhhee
Confidence 456678888888888877555555554433
No 136
>PF15102 TMEM154: TMEM154 protein family
Probab=23.42 E-value=70 Score=25.10 Aligned_cols=21 Identities=10% Similarity=0.278 Sum_probs=10.6
Q ss_pred HHHHHHHhhhhhheecCCCCC
Q 043160 310 VGAIVIVIGLYMVLWGRSKDQ 330 (333)
Q Consensus 310 ~G~~li~~g~~~~~~~~~~~~ 330 (333)
+++++++..++++.+.|||+.
T Consensus 67 LLvlLLl~vV~lv~~~kRkr~ 87 (146)
T PF15102_consen 67 LLVLLLLSVVCLVIYYKRKRT 87 (146)
T ss_pred HHHHHHHHHHHheeEEeeccc
Confidence 344445555666655544443
No 137
>CHL00196 psbY photosystem II protein Y; Provisional
Probab=23.24 E-value=1.3e+02 Score=17.40 Aligned_cols=20 Identities=20% Similarity=0.120 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 043160 185 KGALMIAAGCFSWSCFIILE 204 (333)
Q Consensus 185 ~G~~~~l~a~~~~a~~~v~~ 204 (333)
.-.++.++.+.+|++|++..
T Consensus 6 liVl~Pil~A~~Wa~fNIg~ 25 (36)
T CHL00196 6 LVIAAPVLAAASWALFNIGR 25 (36)
T ss_pred HHHHHHHHHHHHHHHHHhHH
Confidence 44567888999999999863
No 138
>PF11381 DUF3185: Protein of unknown function (DUF3185); InterPro: IPR021521 Some members in this bacterial family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=22.98 E-value=1.1e+02 Score=20.02 Aligned_cols=18 Identities=28% Similarity=0.497 Sum_probs=14.8
Q ss_pred hHHHHHHHHHHHHHHHHh
Q 043160 136 KILGTIVTAGGAMCMTLL 153 (333)
Q Consensus 136 ~~~g~~l~~~Gv~li~~~ 153 (333)
|++|+++.+.|+.++.+.
T Consensus 1 kiigi~Llv~GivLl~~G 18 (59)
T PF11381_consen 1 KIIGIALLVGGIVLLYFG 18 (59)
T ss_pred CeeeehHHHHHHHHHHhh
Confidence 378899999999998754
No 139
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=22.24 E-value=35 Score=20.59 Aligned_cols=16 Identities=19% Similarity=0.301 Sum_probs=7.7
Q ss_pred cchhhhHHHHHHHhhh
Q 043160 304 LFLGRIVGAIVIVIGL 319 (333)
Q Consensus 304 ~~~~~~~G~~li~~g~ 319 (333)
|+|+..+=.++|+.|+
T Consensus 2 p~wlt~iFsvvIil~I 17 (49)
T PF11044_consen 2 PTWLTTIFSVVIILGI 17 (49)
T ss_pred chHHHHHHHHHHHHHH
Confidence 3445444444555544
No 140
>PF07123 PsbW: Photosystem II reaction centre W protein (PsbW); InterPro: IPR009806 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbW found in PSII, where it is a subunit of the oxygen-evolving complex. PsbW appears to have several roles, including guiding PSII biogenesis and assembly, stabilising dimeric PSII [], and facilitating PSII repair after photo-inhibition []. There appears to be two classes of PsbW, class 1 being found predominantly in algae and cyanobacteria, and class 2 being found predominantly in plants. This entry represents class 2 PsbW.; GO: 0015979 photosynthesis, 0009507 chloroplast, 0009523 photosystem II
Probab=21.30 E-value=85 Score=24.26 Aligned_cols=31 Identities=13% Similarity=0.245 Sum_probs=25.4
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043160 178 NKEEHITKGALMIAAGCFSWSCFIILEAFLLK 209 (333)
Q Consensus 178 ~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~ 209 (333)
+. ++...|.++.-+=+..|++|.+.+|.+-+
T Consensus 100 Gl-sn~~LgwIL~gVf~lIWslY~~~~~~l~e 130 (138)
T PF07123_consen 100 GL-SNNLLGWILLGVFGLIWSLYFVYTSTLDE 130 (138)
T ss_pred cc-cCchhHHHHHHHHHHHHHHHHhhccccCC
Confidence 45 66778989888889999999999887543
No 141
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=21.25 E-value=4.4e+02 Score=21.21 Aligned_cols=53 Identities=11% Similarity=0.164 Sum_probs=34.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhh-----hCCCchHHHHHHHHHHHHHHHHHH
Q 043160 181 EHITKGALMIAAGCFSWSCFIILEAFLLK-----SYPAELSLTALMCFVSSVEGTILA 233 (333)
Q Consensus 181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 233 (333)
++.......++.++..+++..++-.-..+ +.|.|.....+.++.++++...+.
T Consensus 128 ~~f~qsv~~gf~a~lGfslvmvlfA~iRER~~~advP~~frG~~ialitagLmSlaFm 185 (193)
T COG4657 128 HNFLQSVVYGFGAALGFSLVMVLFAAIRERLALADVPAPFRGAAIALITAGLMSLAFM 185 (193)
T ss_pred hhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHc
Confidence 55667778888888888887766543333 344566666666666666655544
No 142
>PF08733 PalH: PalH/RIM21; InterPro: IPR014844 PalH (also known as RIM21) is a transmembrane protein required for proteolytic cleavage of Rim101/PacC transcription factors which are activated by C-terminal proteolytic processing. Rim101/PacC family proteins play a key role in pH-dependent responses and PalH has been implicated as a pH sensor [].
Probab=20.24 E-value=6.7e+02 Score=22.94 Aligned_cols=85 Identities=12% Similarity=0.092 Sum_probs=50.5
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHH-H--hcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHH
Q 043160 8 AKPYLGVIFMQFCSSIMSIITKIA-L--TQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEP 84 (333)
Q Consensus 8 ~~~~l~~~~~~~~~~~~~~~~k~~-l--~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 84 (333)
..|.+++++..++|+......... - ..+.=|...-..|..++......++.+...+++-....++...+.+...+..
T Consensus 197 ~vG~~L~i~~~il~ai~~f~~~~~~~~~~~~~lp~~~yl~~ial~~~ya~~v~~y~~~k~k~~~~~~~~~~L~il~~~~i 276 (348)
T PF08733_consen 197 WVGFILIILDQILWAINQFSYFDSDPNSFLDILPAFSYLFRIALSTLYAAWVIYYIISKKKYCFDYKQMIPLAILNLLLI 276 (348)
T ss_pred eHHHHHHHHHHHHHHHHHhccCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhheecchHHHHHHHHHHHH
Confidence 468999999999999988665321 0 1223345555668888888777766654444322232344555555555554
Q ss_pred HHHHHHHH
Q 043160 85 VIGQNLYF 92 (333)
Q Consensus 85 ~~~~~~~~ 92 (333)
.+...++.
T Consensus 277 ~l~~vffI 284 (348)
T PF08733_consen 277 LLPVVFFI 284 (348)
T ss_pred HHHHHhhe
Confidence 44444444
No 143
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=20.14 E-value=9.7e+02 Score=24.72 Aligned_cols=45 Identities=16% Similarity=0.118 Sum_probs=31.2
Q ss_pred hhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHH
Q 043160 100 ATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCM 150 (333)
Q Consensus 100 ~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 150 (333)
.+.+.++..+.|.-.+.++.....+|.+.+. +.+.+-.++|.+.+
T Consensus 10 lgRa~il~~l~PFg~af~~a~~~~~~~~~~~------~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 10 LGRAVIVSPMAPFGIAFLAAVLLAKKGGDKA------FFSALGVLLGAISI 54 (764)
T ss_pred HhHHHHhcCCCchHHHHHHHHHHhhcccchH------HHHHHHHHHHHHHh
Confidence 4567788889999999999988666543333 56555556666654
Done!