BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043163
(172 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1IYM|A Chain A, Ring-H2 Finger Domain Of El5
Length = 55
Score = 74.3 bits (181), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/49 (61%), Positives = 38/49 (77%)
Query: 79 DCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVV 127
+CA+CL E +G+E R LP+CGHGFH C+D WLGSHS+CP CR +VV
Sbjct: 7 ECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVVV 55
>pdb|2ECT|A Chain A, Solution Structure Of The Zinc Finger, C3hc4 Type (Ring
Finger) Domain Of Ring Finger Protein 126
Length = 78
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 70 TSESVAKFSDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILV 126
T E V +C +C ++ G+ +R LP C H FH +CI WL H SCP CR+ L
Sbjct: 8 TEEHVGSGLECPVCKEDYALGESVRQLP-CNHLFHDSCIVPWLEQHDSCPVCRKSLT 63
>pdb|2L0B|A Chain A, Solution Nmr Structure Of Zinc Finger Domain Of E3
Ubiquitin-Protein Ligase Praja-1 From Homo Sapiens,
Northeast Structural Genomics Consortium (Nesg) Target
Hr4710b
Length = 91
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 52 ANKGLKKKILRTLPKQTFTSE--SVAKFSDCAICLTEFVNGDEIRVLPQCGHGFHVACID 109
AN K+ + LP+ T + +V + C IC +E+V GD LP C H FH C+
Sbjct: 13 ANPPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGDVATELP-CHHYFHKPCVS 71
Query: 110 TWLGSHSSCPSCR 122
WL +CP CR
Sbjct: 72 IWLQKSGTCPVCR 84
>pdb|2KIZ|A Chain A, Solution Structure Of Arkadia Ring-H2 Finger Domain
Length = 69
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 80 CAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCR 122
C ICL+ G+++R LP C H FH C+D WL ++ CP CR
Sbjct: 17 CTICLSILEEGEDVRRLP-CMHLFHQVCVDQWLITNKKCPICR 58
>pdb|1X4J|A Chain A, Solution Structure Of Ring Finger In Ring Finger Protein
38
Length = 75
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 80 CAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCR 122
C +C+ +F + +RVLP C H FH C+D WL ++ +CP CR
Sbjct: 26 CVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKANRTCPICR 67
>pdb|2EP4|A Chain A, Solution Structure Of Ring Finger From Human Ring Finger
Protein 24
Length = 74
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 80 CAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSC 121
CA+CL +F DE+ + P C H FH C+ WL CP C
Sbjct: 18 CAVCLEDFKPRDELGICP-CKHAFHRKCLIKWLEVRKVCPLC 58
>pdb|2ECL|A Chain A, Solution Structure Of The Ring Domain Of The Human
Ring-Box Protein 2
Length = 81
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 74 VAKFSDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVAR 129
V C C E D + V +C H FH C+ W+ ++ CP C+Q VV R
Sbjct: 23 VQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQR 78
>pdb|4AYC|B Chain B, Rnf8 Ring Domain Structure
Length = 138
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Query: 80 CAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQ 123
C IC F+ V C H F CI+ W+ CP CR+
Sbjct: 56 CIICSEYFIEA----VTLNCAHSFCSYCINEWMKRKIECPICRK 95
>pdb|4AYC|A Chain A, Rnf8 Ring Domain Structure
Length = 138
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Query: 80 CAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQ 123
C IC F+ V C H F CI+ W+ CP CR+
Sbjct: 56 CIICSEYFIEA----VTLNCAHSFCSYCINEWMKRKIECPICRK 95
>pdb|2ECN|A Chain A, Solution Structure Of The Ring Domain Of The Human Ring
Finger Protein 141
Length = 70
Score = 34.3 bits (77), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Query: 79 DCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVA 128
+C IC+ +G +LP C H F CID W H +CP CR + A
Sbjct: 17 ECCICM----DGRADLILP-CAHSFCQKCIDKWSDRHRNCPICRLQMTGA 61
>pdb|4EPO|C Chain C, Crystal Structure Of Rnf8 Bound To The Ubc13MMS2
HETERODIMER
pdb|4EPO|G Chain G, Crystal Structure Of Rnf8 Bound To The Ubc13MMS2
HETERODIMER
pdb|4EPO|H Chain H, Crystal Structure Of Rnf8 Bound To The Ubc13MMS2
HETERODIMER
pdb|4EPO|K Chain K, Crystal Structure Of Rnf8 Bound To The Ubc13MMS2
HETERODIMER
pdb|4EPO|L Chain L, Crystal Structure Of Rnf8 Bound To The Ubc13MMS2
HETERODIMER
Length = 149
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Query: 80 CAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQ 123
C IC F+ V C H F CI+ W+ CP CR+
Sbjct: 67 CIICSEYFIEA----VTLNCAHSFCSYCINEWMKRKIECPICRK 106
>pdb|2Y43|A Chain A, Rad18 Ubiquitin Ligase Ring Domain Structure
pdb|2Y43|B Chain B, Rad18 Ubiquitin Ligase Ring Domain Structure
Length = 99
Score = 33.1 bits (74), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 72 ESVAKFSDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSC 121
+++ C IC F + ++PQC H + CI +L + CP+C
Sbjct: 17 KTIDDLLRCGICFEYF---NIAMIIPQCSHNYCSLCIRKFLSYKTQCPTC 63
>pdb|2EA6|A Chain A, Solution Structure Of The Ring Domain Of The Human Ring
Finger Protein 4
Length = 69
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 80 CAICL---TEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQ 123
C IC+ +E V + V +CGH F C+ L + ++CP+CR+
Sbjct: 18 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRK 64
>pdb|3NG2|A Chain A, Crystal Structure Of The Rnf4 Ring Domain Dimer
pdb|3NG2|B Chain B, Crystal Structure Of The Rnf4 Ring Domain Dimer
Length = 71
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 80 CAICL---TEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQ 123
C IC+ +E V + V +CGH F C+ L + ++CP+CR+
Sbjct: 13 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRK 59
>pdb|2XEU|A Chain A, Ring Domain
Length = 64
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 80 CAICL---TEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQ 123
C IC+ +E V + V +CGH F C+ L + ++CP+CR+
Sbjct: 6 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRK 52
>pdb|4AP4|A Chain A, Rnf4 - Ubch5a - Ubiquitin Heterotrimeric Complex
Length = 133
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 80 CAICL---TEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQ 123
C IC+ +E V + V +CGH F C+ L + ++CP+CR+
Sbjct: 10 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRK 56
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 80 CAICL---TEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQ 123
C IC+ +E V + V +CGH F C+ L + ++CP+CR+
Sbjct: 75 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRK 121
>pdb|2LGV|A Chain A, Rbx1
Length = 100
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 99 CGHGFHVACIDTWLGSHSSCP 119
C H FH CI WL + CP
Sbjct: 67 CNHAFHFHCISRWLKTRQVCP 87
>pdb|1LDJ|B Chain B, Structure Of The Cul1-rbx1-skp1-f Boxskp2 Scf Ubiquitin
Ligase Complex
pdb|1LDK|C Chain C, Structure Of The Cul1-Rbx1-Skp1-F Boxskp2 Scf Ubiquitin
Ligase Complex
Length = 90
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 99 CGHGFHVACIDTWLGSHSSCP 119
C H FH CI WL + CP
Sbjct: 57 CNHAFHFHCISRWLKTRQVCP 77
>pdb|1CHC|A Chain A, Structure Of The C3hc4 Domain By 1h-Nuclear Magnetic
Resonance Spectroscopy; A New Structural Class Of Zinc-
Finger
Length = 68
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 80 CAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCR 122
C ICL + N LP C H F CI W+ + +CP C+
Sbjct: 8 CPICLEDPSNYS--MALP-CLHAFCYVCITRWIRQNPTCPLCK 47
>pdb|1U6G|B Chain B, Crystal Structure Of The Cand1-Cul1-Roc1 Complex
pdb|2HYE|D Chain D, Crystal Structure Of The Ddb1-cul4a-rbx1-sv5v Complex
Length = 108
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 99 CGHGFHVACIDTWLGSHSSCP 119
C H FH CI WL + CP
Sbjct: 75 CNHAFHFHCISRWLKTRQVCP 95
>pdb|4A0C|D Chain D, Structure Of The Cand1-Cul4b-Rbx1 Complex
pdb|4A0C|F Chain F, Structure Of The Cand1-Cul4b-Rbx1 Complex
pdb|4A0L|F Chain F, Structure Of Ddb1-Ddb2-Cul4b-Rbx1 Bound To A 12 Bp Abasic
Site Containing Dna-Duplex
pdb|4A0L|I Chain I, Structure Of Ddb1-Ddb2-Cul4b-Rbx1 Bound To A 12 Bp Abasic
Site Containing Dna-Duplex
Length = 98
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 99 CGHGFHVACIDTWLGSHSSCP 119
C H FH CI WL + CP
Sbjct: 65 CNHAFHFHCISRWLKTRQVCP 85
>pdb|4A0K|B Chain B, Structure Of Ddb1-Ddb2-Cul4a-Rbx1 Bound To A 12 Bp Abasic
Site Containing Dna-Duplex
Length = 117
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 99 CGHGFHVACIDTWLGSHSSCP 119
C H FH CI WL + CP
Sbjct: 84 CNHAFHFHCISRWLKTRQVCP 104
>pdb|3DPL|R Chain R, Structural Insights Into Nedd8 Activation Of Cullin-Ring
Ligases: Conformational Control Of Conjugation.
pdb|3RTR|B Chain B, A Ring E3-Substrate Complex Poised For Ubiquitin-Like
Protein Transfer: Structural Insights Into Cullin-Ring
Ligases
pdb|3RTR|D Chain D, A Ring E3-Substrate Complex Poised For Ubiquitin-Like
Protein Transfer: Structural Insights Into Cullin-Ring
Ligases
pdb|3RTR|F Chain F, A Ring E3-Substrate Complex Poised For Ubiquitin-Like
Protein Transfer: Structural Insights Into Cullin-Ring
Ligases
pdb|3RTR|H Chain H, A Ring E3-Substrate Complex Poised For Ubiquitin-Like
Protein Transfer: Structural Insights Into Cullin-Ring
Ligases
pdb|4F52|B Chain B, Structure Of A Glomulin-Rbx1-Cul1 Complex
pdb|4F52|D Chain D, Structure Of A Glomulin-Rbx1-Cul1 Complex
Length = 106
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 99 CGHGFHVACIDTWLGSHSSCP 119
C H FH CI WL + CP
Sbjct: 73 CNHAFHFHCISRWLKTRQVCP 93
>pdb|3DQV|R Chain R, Structural Insights Into Nedd8 Activation Of Cullin-Ring
Ligases: Conformational Control Of Conjugation
pdb|3DQV|Y Chain Y, Structural Insights Into Nedd8 Activation Of Cullin-Ring
Ligases: Conformational Control Of Conjugation
Length = 106
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 99 CGHGFHVACIDTWLGSHSSCP 119
C H FH CI WL + CP
Sbjct: 73 CNHAFHFHCISRWLKTRQVCP 93
>pdb|2JRJ|A Chain A, Solution Structure Of The Human Pirh2 Ring-H2 Domain.
Northeast Structural Genomics Consortium Target Ht2b
Length = 52
Score = 28.1 bits (61), Expect = 2.8, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 79 DCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSC 121
+C ICL + + + CGH H C + L CP C
Sbjct: 7 NCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLC 49
>pdb|2ECM|A Chain A, Solution Structure Of The Ring Domain Of The Ring Finger
And Chy Zinc Finger Domain-Containing Protein 1 From Mus
Musculus
Length = 55
Score = 27.7 bits (60), Expect = 3.6, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 18/44 (40%)
Query: 78 SDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSC 121
S C ICL + + + CGH H C + L CP C
Sbjct: 6 SGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLC 49
>pdb|2CT2|A Chain A, Solution Structure Of The Ring Domain Of The Tripartite
Motif Protein 32
Length = 88
Score = 26.6 bits (57), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 72 ESVAKFSDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSS---CPSCRQI 124
+++ + +C IC+ F L CGH C++ L S + CP C +I
Sbjct: 10 DALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKI 65
>pdb|4GY5|A Chain A, Crystal Structure Of The Tandem Tudor Domain And Plant
Homeodomain Of Uhrf1 With Histone H3k9me3
pdb|4GY5|B Chain B, Crystal Structure Of The Tandem Tudor Domain And Plant
Homeodomain Of Uhrf1 With Histone H3k9me3
pdb|4GY5|C Chain C, Crystal Structure Of The Tandem Tudor Domain And Plant
Homeodomain Of Uhrf1 With Histone H3k9me3
pdb|4GY5|D Chain D, Crystal Structure Of The Tandem Tudor Domain And Plant
Homeodomain Of Uhrf1 With Histone H3k9me3
Length = 241
Score = 26.2 bits (56), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 9/53 (16%)
Query: 80 CAICLTEFVNG----DEIRVLPQCGHGFHVACIDTWLGSHSS-----CPSCRQ 123
C +C G D+ + +C FH+ C+D L S S CP CR
Sbjct: 188 CRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 240
>pdb|2H0D|A Chain A, Structure Of A Bmi-1-Ring1b Polycomb Group Ubiquitin
Ligase Complex
Length = 97
Score = 26.2 bits (56), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 80 CAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSC 121
C +C F++ I +C H F CI +L + CP C
Sbjct: 14 CVLCGGYFIDATTI---IECLHSFCKTCIVRYLETSKYCPIC 52
>pdb|3ASK|A Chain A, Structure Of Uhrf1 In Complex With Histone Tail
pdb|3ASK|B Chain B, Structure Of Uhrf1 In Complex With Histone Tail
pdb|3ASK|C Chain C, Structure Of Uhrf1 In Complex With Histone Tail
pdb|3ASK|D Chain D, Structure Of Uhrf1 In Complex With Histone Tail
Length = 226
Score = 26.2 bits (56), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 9/53 (16%)
Query: 80 CAICLTEFVNG----DEIRVLPQCGHGFHVACIDTWLGSHSS-----CPSCRQ 123
C +C G D+ + +C FH+ C+D L S S CP CR
Sbjct: 172 CRVCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224
>pdb|2CKL|A Chain A, Ring1b-Bmi1 E3 Catalytic Domain Structure
Length = 108
Score = 26.2 bits (56), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 80 CAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSC 121
C +C F++ I +C H F CI +L + CP C
Sbjct: 18 CVLCGGYFIDATTI---IECLHSFCKTCIVRYLETSKYCPIC 56
>pdb|3RPG|B Chain B, Bmi1RING1B-Ubch5c Complex Structure
Length = 117
Score = 26.2 bits (56), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 80 CAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSC 121
C +C F++ I +C H F CI +L + CP C
Sbjct: 18 CVLCGGYFIDATTI---IECLHSFCKTCIVRYLETSKYCPIC 56
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.133 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,922,625
Number of Sequences: 62578
Number of extensions: 120769
Number of successful extensions: 270
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 237
Number of HSP's gapped (non-prelim): 47
length of query: 172
length of database: 14,973,337
effective HSP length: 92
effective length of query: 80
effective length of database: 9,216,161
effective search space: 737292880
effective search space used: 737292880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (23.1 bits)