BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043163
(172 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 207 bits (526), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 125/177 (70%), Gaps = 12/177 (6%)
Query: 1 SDYVVILAALLCALICVLGLIAVARCAWLRRLSGGGAAATNPSGTSTRNSP---ANKGLK 57
SD VVILAALLCALICVLGLIAV+RC WLRRL+ G + S T + P ANKGLK
Sbjct: 28 SDLVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRTVSG-SQTQSPQPPVAAANKGLK 86
Query: 58 KKILRTLPKQTFTSES--VAKFSDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSH 115
KK+L++LPK TF+ ES KF++CAICL EF GDE+RVLPQCGHGFHVACIDTWLGSH
Sbjct: 87 KKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSH 146
Query: 116 SSCPSCRQILVVARCQKCGGFPASSSSSSGAGVEGGAAETSEARSEEKQDDPNRFLP 172
SSCPSCRQILVVARC KC + + E R ++ +DDPN FLP
Sbjct: 147 SSCPSCRQILVVARCHKC------GGLPGSSSSGLESEPEIEIRIKQGEDDPNSFLP 197
>sp|Q8LC69|ATL8_ARATH RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2
SV=2
Length = 185
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/136 (66%), Positives = 107/136 (78%), Gaps = 7/136 (5%)
Query: 1 SDYVVILAALLCALICVLGLIAVARCAWLRRL-SGGGAAATNPSGTSTRNSPANKGLKKK 59
SD V+ILA LLCAL C++GLIAV+RCAWLRR+ S + T+P + ANKGLKKK
Sbjct: 26 SDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQTHPPPVAA----ANKGLKKK 81
Query: 60 ILRTLPKQTFTSES--VAKFSDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSS 117
+LR+LPK T++ +S K +CAICLTEF GDE+RVLPQCGHGFHV+CIDTWLGSHSS
Sbjct: 82 VLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSS 141
Query: 118 CPSCRQILVVARCQKC 133
CPSCRQILVV RC KC
Sbjct: 142 CPSCRQILVVTRCHKC 157
>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
SV=1
Length = 185
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/143 (58%), Positives = 100/143 (69%), Gaps = 21/143 (14%)
Query: 1 SDYVVILAALLCALICVLGLIAVARCAWLRRLSGGGAAATNPSGTSTRNSPA-NKGLKKK 59
SD VVIL+ALLCALICV GL AV RCAWLRR + GG +SP+ NKGLKKK
Sbjct: 26 SDMVVILSALLCALICVAGLAAVVRCAWLRRFTAGG------------DSPSPNKGLKKK 73
Query: 60 ILRTLPKQTFTS-ESVA-------KFSDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTW 111
L++LP+ TFT+ ES + ++CAICLT+F +G+EIRVLP CGH FHV CID W
Sbjct: 74 ALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKW 133
Query: 112 LGSHSSCPSCRQILVVARCQKCG 134
L S SSCPSCR+IL RC +CG
Sbjct: 134 LVSRSSCPSCRRILTPVRCDRCG 156
>sp|Q9ZT49|ATL45_ARATH RING-H2 finger protein ATL45 OS=Arabidopsis thaliana GN=ATL45 PE=2
SV=1
Length = 200
Score = 151 bits (382), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/150 (54%), Positives = 97/150 (64%), Gaps = 22/150 (14%)
Query: 1 SDYVVILAALLCALICVLGLIAVARCAWLRRLSGGGAAATNPSGTSTRNSPANKGLKKKI 60
+D VVIL+ALLCAL+CV GL AVARCAWLRRL+G AA P NKGLKKK
Sbjct: 24 TDMVVILSALLCALVCVAGLAAVARCAWLRRLTGVNPAAVG------EAPPPNKGLKKKA 77
Query: 61 LRTLPKQTFTSESVAKF----------------SDCAICLTEFVNGDEIRVLPQCGHGFH 104
L+ LPK T+T+ + ++CAIC+TEF G+EIR+LP C H FH
Sbjct: 78 LQALPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFH 137
Query: 105 VACIDTWLGSHSSCPSCRQILVVARCQKCG 134
VACID WL S SSCPSCR+ILV +C +CG
Sbjct: 138 VACIDKWLTSRSSCPSCRRILVPVKCDRCG 167
>sp|Q9FLC6|ATL73_ARATH RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2
SV=1
Length = 176
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 84/126 (66%), Gaps = 5/126 (3%)
Query: 1 SDYVVILAALLCALICVLGLIAVARCAWLRRLSGGGAAATNPSGTSTRNSPANKGLKKKI 60
+ V+ILAALLCALIC LG+ +V RC R + +P T N+ KG+KK+
Sbjct: 39 THMVIILAALLCALICALGINSVLRCVL--RCTRRFTPNEDPVDT---NANVAKGIKKRA 93
Query: 61 LRTLPKQTFTSESVAKFSDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPS 120
L+ +P +++ E K ++C ICL +FV G+ +RVLP+C HGFHV CIDTWL SHSSCP+
Sbjct: 94 LKVIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPT 153
Query: 121 CRQILV 126
CRQ L+
Sbjct: 154 CRQSLL 159
>sp|P0C034|ATL10_ARATH RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2
SV=1
Length = 251
Score = 119 bits (298), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 93/150 (62%), Gaps = 5/150 (3%)
Query: 2 DYVVILAALLCALICVLGLIAVARCAWLRRLSGGGAAATNPSGTSTRNSPANKGLKKKIL 61
+ +++L+ L+C +IC LGL + RCA LRR + + PS +STR S +NKG+KKK L
Sbjct: 57 NVMMLLSILICGIICCLGLHYIIRCA-LRRSTRFMISEPVPSLSSTRGS-SNKGIKKKAL 114
Query: 62 RTLPKQTFTSESVAKFSD--CAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCP 119
R P +++ E D C ICL++FV+G+++R+LP+C HGFHV CID WL H +CP
Sbjct: 115 RMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCP 174
Query: 120 SCRQILVVARCQKCGGFPASSSSSSGAGVE 149
CR L V CQK G + + S + E
Sbjct: 175 KCRNCL-VETCQKILGDFSQADSVTAEPTE 203
>sp|Q9LS99|ATL77_ARATH RING-H2 finger protein ATL77 OS=Arabidopsis thaliana GN=ATL77 PE=2
SV=1
Length = 220
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 91/160 (56%), Gaps = 9/160 (5%)
Query: 2 DYVVILAALLCALICVLGLIAVARCAWLRRLSGGGAAATNPSGTSTRNSPANKGLKKKIL 61
+ +++L+ LLC +IC LGL + RCA++R S + + T R+S NKG+KKK L
Sbjct: 51 NVLMLLSILLCGIICSLGLHYIIRCAFIRSRSFMISDPISIPSTP-RDSSVNKGIKKKAL 109
Query: 62 RTLPKQTFTSESVAKF--SDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCP 119
+ LP ++ E +C ICL++FV G+++RVLP+C HGFH+ CID WL H +CP
Sbjct: 110 KMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCP 169
Query: 120 SCRQILVVARCQKCGGFPASSSSSSGAGVEGGAAETSEAR 159
CR L V CQK S + V A E+ + R
Sbjct: 170 KCRHCL-VDTCQK-----VLSDCDAADQVAATATESIDIR 203
>sp|Q94BY6|ATL75_ARATH RING-H2 finger protein ATL75 OS=Arabidopsis thaliana GN=ATL75 PE=2
SV=1
Length = 226
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 83/136 (61%), Gaps = 5/136 (3%)
Query: 2 DYVVILAALLCALICVLGLIAVARCAWLRRLSGGGAAATNPSGTSTRNSPANKGLKKKIL 61
+ +++L+ L+C +IC LGL + RCA+ R + + +G ST +NKG+ KK L
Sbjct: 58 NVLMLLSVLICGIICCLGLHYIIRCAFRR--TSSFMISEPIAGLSTPCGSSNKGINKKAL 115
Query: 62 RTLPKQTFTSESVAKF--SDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCP 119
R P +++ E +C ICL++FV+G++IR+LP+C HGFHV CID WL H +CP
Sbjct: 116 RMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCP 175
Query: 120 SCRQILVVARCQKCGG 135
CR L V CQK G
Sbjct: 176 KCRHCL-VETCQKILG 190
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 86/134 (64%), Gaps = 6/134 (4%)
Query: 1 SDYVVILAALLCALICVLGLIAVARCAW--LRRLSGGGAA--ATNPSGTSTRNSPANKGL 56
++ V+ILAALLCALIC L L + RC RR + A+N + R + A GL
Sbjct: 31 TNMVIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSNASNANANLGRLAAAT-GL 89
Query: 57 KKKILRTLPKQTFTSESV-AKFSDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSH 115
KK+ L+ +P + S + K ++C ICL +F +G+++RVLP+C HGFHV CIDTWL S
Sbjct: 90 KKQALKQIPVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSR 149
Query: 116 SSCPSCRQILVVAR 129
SSCP+CRQ L++ +
Sbjct: 150 SSCPTCRQSLLLEQ 163
>sp|Q6NML0|ATL76_ARATH E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana GN=ATL76
PE=1 SV=1
Length = 225
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 89/146 (60%), Gaps = 6/146 (4%)
Query: 2 DYVVILAALLCALICVLGLIAVARCAWLRRLSGGGAAATNPSGTSTRNSPANKGLKKKIL 61
+ +++L+ L+C +IC LGL + RCA+ R S + S ST S +NKG+KKK L
Sbjct: 57 NVLMLLSVLICGIICCLGLHYIIRCAFRR--SSRFMISEPISSLSTPRSSSNKGIKKKAL 114
Query: 62 RTLPKQTFTSESVAKF--SDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCP 119
R P +++ E +C ICL++FV+G+++R+LP+C HGFHV CID WL H +CP
Sbjct: 115 RMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCP 174
Query: 120 SCRQILVVARCQKC-GGFPASSSSSS 144
CR L V CQK G F + S +S
Sbjct: 175 KCRHCL-VETCQKILGDFSQADSMAS 199
>sp|Q6NQG7|ATL78_ARATH RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2
SV=1
Length = 219
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 86/146 (58%), Gaps = 7/146 (4%)
Query: 1 SDYVVILAALLCALICVLGLIAVARCAWLRRLSGGGAAATNPSGTSTRNSPANKGLKKKI 60
++ V++L+ LLCAL+C LGL ++ RCA L + G + N G+K+K
Sbjct: 54 ANVVMVLSVLLCALVCSLGLNSIIRCA----LRCSNLVPSEAGGDNYPVRLTNTGVKRKA 109
Query: 61 LRTLPKQTFTSESVAKFSD--CAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSC 118
L++ ++++E D CAICL+EFV + +++LP C HGFHV CID WL SHSSC
Sbjct: 110 LKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSC 169
Query: 119 PSCRQILVVARCQKCGGFPASSSSSS 144
P+CR L + C+K +SS +S
Sbjct: 170 PTCRHCL-IQTCEKIADCSQTSSLNS 194
>sp|Q9LZV8|ATL74_ARATH RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2
SV=1
Length = 159
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 55 GLKKKILRTLPKQTFTSESVA-KFSDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLG 113
GLKK+ L+ P + S V ++CAICL EF +G+ +RVLP C H FH++CIDTWL
Sbjct: 79 GLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLV 138
Query: 114 SHSSCPSCRQILV 126
SHSSCP+CR L+
Sbjct: 139 SHSSCPNCRHSLI 151
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%)
Query: 52 ANKGLKKKILRTLPKQTFTSESVAKFSDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTW 111
A++GL ++++LP TF+ E+ +CA+CL+EF + RVLP C H FHV CID W
Sbjct: 91 ASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMW 150
Query: 112 LGSHSSCPSCRQIL 125
SHS+CP CR ++
Sbjct: 151 FHSHSTCPLCRSLV 164
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 53 NKGLKKKILRTLPKQTFTSESVAKFSDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWL 112
N GL KIL+++ F +CA+CL++ V+GD+ RVLP+C HGFHV CID W
Sbjct: 93 NAGLDSKILQSIHVVVFKCTDFKDGLECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWF 152
Query: 113 GSHSSCPSCRQILVVARCQKCG---GFPASSSSSSG 145
SHS+CP CR + G G P + + SG
Sbjct: 153 QSHSTCPLCRNTVGSVEDTTHGGSEGLPQNQNFESG 188
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 47 TRNSPANKGLKKKILRTLPKQTFTSESVAKFSDCAICLTEFVNGDEIRVLPQCGHGFHVA 106
+R +GL + +R+LP +T + + DC ICL++F G+ ++V+P CGH FHV
Sbjct: 107 SRPYSFRRGLDSQAVRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVD 166
Query: 107 CIDTWLGSHSSCPSCR 122
C+DTWL S+ +CP CR
Sbjct: 167 CVDTWLSSYVTCPLCR 182
>sp|Q9LUL6|ATL61_ARATH Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana
GN=ATL61 PE=3 SV=1
Length = 204
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 47/69 (68%)
Query: 55 GLKKKILRTLPKQTFTSESVAKFSDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGS 114
G+K +LR++P F ++ +C +CL+E +GD+ RVLP C H FHV CID+WL S
Sbjct: 63 GIKPYVLRSIPIVDFNTKDFKYVLECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQS 122
Query: 115 HSSCPSCRQ 123
+S+CP CR+
Sbjct: 123 NSTCPICRK 131
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%)
Query: 48 RNSPANKGLKKKILRTLPKQTFTSESVAKFSDCAICLTEFVNGDEIRVLPQCGHGFHVAC 107
+++ +N GL L +LP F +S +C+ICL+E V GD+ R+LP+C H FHV C
Sbjct: 95 QDALSNTGLTSFELSSLPIVFFRQDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVEC 154
Query: 108 IDTWLGSHSSCPSCRQILV 126
ID W SHS+CP CR ++
Sbjct: 155 IDMWFQSHSTCPICRNTVL 173
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Query: 4 VVILAALLCALICVLGLIAVAR-CAWLRRLSGGGAAATNPSG-----TSTRNSPANKGLK 57
+ ++ L ALI V +++ C + S N +G ++ R S GL
Sbjct: 59 IALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLN 118
Query: 58 KKILRTLPKQTFTS-ESVAKFSDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHS 116
+ +++++ + S + SDC++CL+EF + +R+LP+C H FH+ CIDTWL SHS
Sbjct: 119 ESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHS 178
Query: 117 SCPSCRQILV 126
+CP CR +
Sbjct: 179 NCPLCRAFVT 188
>sp|Q9SN27|ATL59_ARATH E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59
PE=1 SV=1
Length = 225
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 4 VVILAALLCALICVLGLIAVARCAWLRRLSGGGAAATNPSG---TSTRNSPANKGLKKKI 60
++ ++C ICV+ LI + +RR S ++ G T+ S A GL K I
Sbjct: 19 ILKFTFIVCVPICVI-LIVLLVLYIMRRNSNTNVDWSSLGGFVPTNNNLSTAELGLSKDI 77
Query: 61 LRTLPKQTFTSESVAKFSDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPS 120
LP + + C++CL ++ ++++ +P CGH FH+ CID WL SH++CP
Sbjct: 78 REMLPIVIYKESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPL 137
Query: 121 CR--------------QILVVARCQKCGGFPASSSSSSGAG---------VEGGAAETSE 157
CR I +V+ + G AS+ S + VE G ++ E
Sbjct: 138 CRLSLIPKPSVDLSHQSIEIVSSIENTNGGEASTQPDSQSATEAIIHIDDVEEGNRDSIE 197
Query: 158 ARSEEKQDDPN 168
E +++D N
Sbjct: 198 VVKESEENDRN 208
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Query: 23 VARCAWLRRLSGGGAAATNPSGTSTRNSPANKGLKKKILRTLPKQTFTSESVAKFSDCAI 82
+ R + R + T+PS T GL I+++LP TF++ + +C++
Sbjct: 26 LLRSSPFNRTTAASTFFTDPSSTP-------GGLNPSIIKSLPIFTFSAVTALFAMECSV 78
Query: 83 CLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCR 122
CL+EF + + RV+P C H FHV CID W SHSSCP CR
Sbjct: 79 CLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCR 118
>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
SV=1
Length = 236
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 43/198 (21%)
Query: 6 ILAALLCALICVLGLIAVARCAWLRR------------LSGGGAAATNPSGTSTRNSPAN 53
I + +C VL ++ V +LRR + GG TN S A
Sbjct: 33 IFSVPICFTFIVLFVLYVI---YLRRNSTTNVDWSSLGMRGGTFVPTN-----NNLSTAE 84
Query: 54 KGLKKKILRTLPKQTFTSESVAKFSDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLG 113
GL K I LP + + K S C++CL ++ ++++ +P CGH FH+ CID WL
Sbjct: 85 LGLSKDIREMLPVVIYKESFIVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLT 144
Query: 114 SHSSCPSCRQIL--------------VVARCQKCGGFPASSSSSSGAG---------VEG 150
SH++CP CR L +V+ + G AS+ S + VE
Sbjct: 145 SHTTCPLCRLSLIPKPSLDLSHQSTEIVSSIENSNGGEASTQPDSQSATEAISHTDDVEE 204
Query: 151 GAAETSEARSEEKQDDPN 168
G ++ E E +++D N
Sbjct: 205 GNRDSQEVSKETEENDRN 222
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 1 SDYVVILAALLCALICVLGLIAVARCAWLRRLSGGGAAATNPSGTSTRNSPAN---KGLK 57
S + ++ +L A + +G ++ + R SG A +P+G + + N +GL
Sbjct: 46 SPAMAVIVVILIAALFFMGFFSI----YFRHCSGVPDAGVSPAGGARSRATVNAAARGLD 101
Query: 58 KKILRTLPKQTFTSESVAKFS----DCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLG 113
++ T P ++ K +CAICL EF + + +R+LP+C H FH CID WL
Sbjct: 102 VSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLE 161
Query: 114 SHSSCPSCRQIL 125
+H +CP CR L
Sbjct: 162 AHVTCPVCRANL 173
>sp|Q9LRB7|EL5_ORYSJ E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica
GN=EL5.1 PE=1 SV=1
Length = 325
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 11/78 (14%)
Query: 56 LKKKILRTLPKQTFTSESVAKFS-----------DCAICLTEFVNGDEIRVLPQCGHGFH 104
+ ++LR+LP ++ + A + +CA+CL E +G+E R LP+CGHGFH
Sbjct: 99 VDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFH 158
Query: 105 VACIDTWLGSHSSCPSCR 122
C+D WLGSHS+CP CR
Sbjct: 159 AECVDMWLGSHSTCPLCR 176
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 4 VVILAALLCALICVLGLIAVARCAWLRRLSGGGAAATNPSGT-STRNSPANKGLKKKILR 62
+ IL +L ++ LG +V L R+ G N +G N +GL I+
Sbjct: 63 MAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQARGLDASIIE 122
Query: 63 TLPKQTFTSESVAKFS----DCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSC 118
T P +++ + +C++CL EF + + +R++P+C H FH CID WL SH++C
Sbjct: 123 TFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTC 182
Query: 119 PSCRQILV 126
P CR L+
Sbjct: 183 PLCRADLI 190
>sp|Q9FGJ6|ATL79_ARATH RING-H2 finger protein ATL79 OS=Arabidopsis thaliana GN=ATL79 PE=2
SV=1
Length = 166
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 60/120 (50%), Gaps = 14/120 (11%)
Query: 5 VILAALLCALICVLGLIAVARCAWLRRLSGGGAAATNPSGTSTRNSPANKGLKKKILRTL 64
V+L ++ ALIC L L A RC L +P ++ T
Sbjct: 42 VLLILVISALICALSLYAAIRCFLRPTLETEDDHKPDPEAAASSTP------------TT 89
Query: 65 PKQTFTS--ESVAKFSDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCR 122
P ++S E ++CAICL+EF G+ I+VL +C HGFHV CI WL + SSCP+CR
Sbjct: 90 PTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCR 149
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 78 SDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVA 128
SDC++CL+EF + +R+LP+C H FHV CIDTWL SHS+CP CR +V +
Sbjct: 157 SDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTS 207
>sp|Q9LQM2|ATL81_ARATH RING-H2 finger protein ATL81 OS=Arabidopsis thaliana GN=ATL81 PE=2
SV=1
Length = 332
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 29 LRRLSGGGAAATNPSG-TSTRNSPANKGLKKKILRTLPKQTFTSESVAKFSDCAICLTEF 87
L R+ PS N P N GL KI+ + P+ ++ + C+ICLTEF
Sbjct: 103 LMRIWNNHRNRNRPSNLIQPSNPPENLGLDSKIIESFPEYPYSVKDHGT-DQCSICLTEF 161
Query: 88 VNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVV 127
++ D IR++ C H FH CID W H +CP CR+ L V
Sbjct: 162 MDDDTIRLISTCNHSFHTICIDLWFEGHKTCPVCRRELDV 201
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 53 NKGLKKKILRTLPKQTFTSESVAKFS--DCAICLTEFVNGDEIRVLPQCGHGFHVACIDT 110
+ G+ + ++ TLP + S K S DC +CL EF D++R+LP+C H FHV CIDT
Sbjct: 97 DSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDT 156
Query: 111 WLGSHSSCPSCRQILV 126
WL SHS+CP CR L+
Sbjct: 157 WLLSHSTCPLCRSNLL 172
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 12/122 (9%)
Query: 6 ILAALLCALICVLGLIAV-ARCAWLRRLSGGGAAATNPSGTSTRNSPANKGLKKKILRTL 64
I+A ++ A+ LG+++ C + R G +G +S A +GL+K+++ +
Sbjct: 51 IIAIVVLAIFISLGMVSCCLHCIFYREEIGA-------AGQDVLHSRARRGLEKEVIESF 103
Query: 65 PKQTFTSESVAKFS----DCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPS 120
P ++ K +CAICL+EF + + +R +P C H FH CID WL S S+CP
Sbjct: 104 PTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPV 163
Query: 121 CR 122
CR
Sbjct: 164 CR 165
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 11/131 (8%)
Query: 4 VVILAALLCALICVLGLIAVARCAWLRR--------LSGGGAAATNPSG-TSTRNSPANK 54
+V+L L ++I + + +L R G ++T G TR + +
Sbjct: 35 IVLLYITLLSIIFFVAALIHLLVKFLHRPQTRLDDAYDGITESSTALQGRYQTRFNLHDA 94
Query: 55 GLKKKILRTLPKQTFTSESVAK--FSDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWL 112
+ + + LP + + + SDCA+CL EF DE+R+LP+C H FHV CIDTWL
Sbjct: 95 EIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWL 154
Query: 113 GSHSSCPSCRQ 123
++S+CP CR
Sbjct: 155 LTNSTCPLCRD 165
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 6/120 (5%)
Query: 7 LAALLCALICVLGLIAVARCAWLRRLSGGGAAATNPSGTSTRN-SPANKGLKKKILRTLP 65
+ L A+I +L + AR WL R S T + SP ++ L + +L +P
Sbjct: 33 VIVLFVAVIMILCFHSYAR--WLFRRHNRRIRRRIRSHLRTLSASPRDQALDQAVLDKIP 90
Query: 66 KQTFTSESVAKFSD---CAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCR 122
++S++ + C++CL+EF DE R+LP+CGH FHV CIDTW S S+CP CR
Sbjct: 91 IFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCR 150
>sp|O49691|ATL29_ARATH RING-H2 finger protein ATL29 OS=Arabidopsis thaliana GN=ATL29 PE=3
SV=1
Length = 289
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 75/180 (41%), Gaps = 30/180 (16%)
Query: 5 VILAALLCALICVLGLIAVARC---------AWLRRLSGGGAAATNPSGTSTRNSPANKG 55
VIL +L + G + C AW RL GG ++ P N G
Sbjct: 25 VILTVILLVFFFI-GFFTLYFCKCFLDTMVQAW--RLHHGGDTVSDNPLQQPEAPPVNPG 81
Query: 56 LKKKILRTLPKQTFTSESVAKFSD------CAICLTEFVNGDEIRVLPQCGHGFHVACID 109
L+ +I+ + P TF SV + CAICL EF +R+L C H FH CID
Sbjct: 82 LELRIINSFP--TFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLLTTCYHVFHQECID 139
Query: 110 TWLGSHSSCPSCRQILVVARCQKCGGFPASSSSSSGAGVEGGAAETSEARSEEKQDDPNR 169
W SH +CP CR+ L ++ V+ + + S++++DD +R
Sbjct: 140 LWFESHRTCPVCRRDLDP----------PPPPENTKPTVDEMIIDVIQETSDDEEDDHHR 189
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 5/87 (5%)
Query: 37 AAATNPSGTSTRNSPANKGLKKKILRTLPKQTFTSES-VAKFSDCAICLTEFVNGDEIRV 95
AAA +P+ +S+ SP L +L +P ++ ++ + +C++CL+EF DE RV
Sbjct: 73 AAARDPTQSSSSLSP----LDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRV 128
Query: 96 LPQCGHGFHVACIDTWLGSHSSCPSCR 122
LP+CGH FHV CIDTW S SSCP CR
Sbjct: 129 LPKCGHVFHVDCIDTWFRSRSSCPLCR 155
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 15/134 (11%)
Query: 4 VVILAALLCALICVLGLIAVARCAWLRRLSGGGAAATNPSGTSTRNSPANK--------- 54
+ I A+L L+ L+A + R++ G + N +
Sbjct: 86 ITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQVDHPIW 145
Query: 55 -----GLKKKILRTLPKQTFT-SESVAKFSDCAICLTEFVNGDEIRVLPQCGHGFHVACI 108
GL++ I+ ++ + + + + +DC +CL EF + +R+LP+C H FH++CI
Sbjct: 146 LIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHISCI 205
Query: 109 DTWLGSHSSCPSCR 122
DTWL SH++CP CR
Sbjct: 206 DTWLSSHTNCPLCR 219
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
Query: 53 NKGLKKKILRTLPKQTFTSESVAKFS----DCAICLTEFVNGDEIRVLPQCGHGFHVACI 108
+ G+ + + TLP F +S+ DCA+CL EF D++R+LP+C H FH+ CI
Sbjct: 105 DSGVDQSFIDTLP--VFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCI 162
Query: 109 DTWLGSHSSCPSCR 122
DTWL SHS+CP CR
Sbjct: 163 DTWLLSHSTCPLCR 176
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Query: 6 ILAALLCALICVLGLIAVARCAWLRRLSGGGAAATNPSGTSTRNSPANKGLKKKILRTLP 65
++A ++ A+ L ++A R A + +S A +GL+K+++ + P
Sbjct: 51 VIAIIVLAIFISLSMVACFLHKTFYR------AEVEAASQEVFHSRARRGLEKELVESFP 104
Query: 66 KQTFTSESVAKFS----DCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSC 121
++ K +CAICL+EFV+ + +R +P C H FH CID WL S S+CP+C
Sbjct: 105 IFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQSTCPAC 164
Query: 122 R 122
R
Sbjct: 165 R 165
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 44/83 (53%), Gaps = 11/83 (13%)
Query: 55 GLKKKILRTLP-----------KQTFTSESVAKFSDCAICLTEFVNGDEIRVLPQCGHGF 103
GL +++TLP K S A DCA+CL EF GD +R LP C H F
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 104 HVACIDTWLGSHSSCPSCRQILV 126
H+ CID WL SH +CP CR ++
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAIL 202
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 71/137 (51%), Gaps = 21/137 (15%)
Query: 9 ALLCALICVLGLIAVARCAWLRRLSGGGAAATNP-SGTSTRNSPANKG------LKKKIL 61
A+L L + GL++V ++R A +NP S T + AN G L ++
Sbjct: 51 AVLVTLFFLTGLLSV----YIRH-----CARSNPDSSTRYFRNRANDGSSRRGGLDNAVV 101
Query: 62 RTLPKQTFTSESVAKFS----DCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSS 117
+ P ++S +K +CAICL E + + +R+LP C H FH+ CIDTWL SH++
Sbjct: 102 ESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHAT 161
Query: 118 CPSCRQILVVARCQKCG 134
CP CR L A+ K G
Sbjct: 162 CPVCRSNL-TAKSNKPG 177
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%)
Query: 78 SDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCQK 132
+DC+ICL EF + +R+LP+C H FHV CID WL SHS+CP CR ++V Q+
Sbjct: 153 TDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIVPTTQQ 207
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 4 VVILAALLCALICVLGL-IAVARCAWLR---RLSGGGAAATNPSGTSTRNSPANKGLKKK 59
VV+L AL+ A + + + + RCA R R + A+ P G + S A++GL K+
Sbjct: 48 VVVLVALITAFVLLTVFSVLINRCAQARAPPRRAFRSTASHQPVGGAAAASRASRGLDKE 107
Query: 60 ILRTLPKQTF---TSESVAKFS--DCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGS 114
++ P + + AK +CA+CL EF + DE+RVLP C H FH CID WL +
Sbjct: 108 VVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDCIDPWLAA 167
Query: 115 HSSCPSCRQILV 126
+CP CR L
Sbjct: 168 AVTCPLCRANLT 179
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 53 NKGLKKKILRTLPKQTF--TSESVAKFSDCAICLTEFVNGDEIRVLPQCGHGFHVACIDT 110
+ GL + + LP + + S+ + DCA+CL EF + D++R+LP C H FH+ CIDT
Sbjct: 178 DSGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDT 237
Query: 111 WLGSHSSCPSCRQIL 125
WL S+S+CP CR+ L
Sbjct: 238 WLLSNSTCPLCRRSL 252
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 15/138 (10%)
Query: 4 VVILAALLCALICVLGLIAVARCAWLRRLSGGGAAATNPSGTSTRNSPAN---------- 53
++ + LL + + ++ + +L++ +++ N S + S ++
Sbjct: 53 ILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLF 112
Query: 54 ----KGLKKKILRTLPKQTFTS-ESVAKFSDCAICLTEFVNGDEIRVLPQCGHGFHVACI 108
GL + ++ LP + + + DCA+CL EF D++R+LP C H FH+ CI
Sbjct: 113 HLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCI 172
Query: 109 DTWLGSHSSCPSCRQILV 126
DTWL S+S+CP CR L
Sbjct: 173 DTWLLSNSTCPLCRGTLF 190
>sp|Q8GT74|NIP2_ARATH NEP1-interacting protein 2 OS=Arabidopsis thaliana GN=NIP2 PE=1
SV=1
Length = 241
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 45 TSTRNSPANKGLKKKILRTLPKQTFTSESVAKFSD----CAICLTEFVNGDEIRVLPQCG 100
TS ++ +KGL ++ +PK T T + S+ C++CL +F G+ +R LP C
Sbjct: 157 TSLFDTGGSKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHCH 216
Query: 101 HGFHVACIDTWLGSHSSCPSCRQ 123
H FH+ CID WL H SCP CR+
Sbjct: 217 HMFHLPCIDNWLLRHGSCPMCRR 239
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 7/86 (8%)
Query: 53 NKGLKKKILRTLPKQTFTSESVAKFS-DCAICLTEFVNGDEIRVLPQCGHGFHVACIDTW 111
N G+ + ++ +LP F + S K +CA+CL F + +R+LP+C H FHV C+DTW
Sbjct: 118 NSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTW 177
Query: 112 LGSHSSCPSCR------QILVVARCQ 131
L +HS+CP CR IL++ C
Sbjct: 178 LDAHSTCPLCRYRVDPEDILLIGDCN 203
>sp|Q570X5|ATL58_ARATH RING-H2 finger protein ATL58 OS=Arabidopsis thaliana GN=ATL58 PE=2
SV=1
Length = 261
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%)
Query: 55 GLKKKILRTLPKQTFTSESVAKFSDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGS 114
GL K++ LP F S C++CL ++ D+++ +P C H FH+ CID WL S
Sbjct: 75 GLSKELREMLPIVVFKESFTVMDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTS 134
Query: 115 HSSCPSCRQILVVARCQKCGGFPASSSSSSGAGV 148
H++CP CR L+ +R ++ P S S V
Sbjct: 135 HTTCPLCRLALIPSRSRQSQDDPVPSLVSPDEEV 168
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 11/123 (8%)
Query: 9 ALLCALICVLGLIAVARCAWLRRLSGGGAAATNPS--------GTSTRNSPANKGLKKKI 60
A++ AL VL + A+C + SG G + ST +S GL K
Sbjct: 45 AIMFALTFVL--LVYAKCCHIDLRSGSGDRRRHDRRLRQGIFFNRSTASSDRFSGLDKTA 102
Query: 61 LRTLPKQTFTSESVAKFS-DCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCP 119
+ +LP F++ +K DC++CL++F + + +R+LP+C H FH+ CID WL H++CP
Sbjct: 103 IESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCP 162
Query: 120 SCR 122
CR
Sbjct: 163 LCR 165
>sp|Q9LUZ9|ATL63_ARATH RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2
SV=1
Length = 308
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 32 LSGGGAAATNPSGTSTRNSPANKGLKKKILRTLPKQTFTSESVAKFSD--CAICLTEFVN 89
L G ++P+ T+TR+ +KGL ++ ++P + + + C ICL +
Sbjct: 91 LGGFDDGVSSPAATATRD---DKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEA 147
Query: 90 GDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVA 128
GD R L CGHGFHV CID WL SHS+CP CR ++ A
Sbjct: 148 GDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAA 186
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 78 SDCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCR 122
+DC++CL EF +G+ +R+LP+C H FH CIDTWL SHS+CP CR
Sbjct: 155 TDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCR 199
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 13 ALICVLGLIAVARCAWLRRLSGGGAAATNPSGTSTR---NSPANKGLKKKILRTLPKQTF 69
A + +G V ++R +G + P+G + R N+ +GL + + T P +
Sbjct: 54 AALFFMGFFTV----YIRHCTGAVDGSVTPAGGARRRVTNATVARGLDAETIETFPTFVY 109
Query: 70 TSESVAKFS----DCAICLTEFVNGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQIL 125
+ K +CAICL EF + + +R+LP+C H FH CI WL H +CP CR L
Sbjct: 110 SEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNL 169
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 7/121 (5%)
Query: 44 GTSTRNSPANKGLKKKILRTLPKQTFTSESVAKFS----DCAICLTEFVNGDEIRVLPQC 99
G +S +G+ K ++ + P ++ K +CAICL EF + + +R +P C
Sbjct: 80 GHEVLHSRVRRGIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPC 139
Query: 100 GHGFHVACIDTWLGSHSSCPSCRQILVVARCQKCGGFPASSSSSSGAGVEGGAAETSEAR 159
H FH CID WL S S+CP CR L + + FP S + G E+ + R
Sbjct: 140 SHTFHANCIDEWLSSRSTCPVCRANLSL---KSGDSFPHPSMDVETGNAQRGVQESPDER 196
Query: 160 S 160
S
Sbjct: 197 S 197
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,149,742
Number of Sequences: 539616
Number of extensions: 2575527
Number of successful extensions: 9780
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 336
Number of HSP's successfully gapped in prelim test: 185
Number of HSP's that attempted gapping in prelim test: 9252
Number of HSP's gapped (non-prelim): 573
length of query: 172
length of database: 191,569,459
effective HSP length: 109
effective length of query: 63
effective length of database: 132,751,315
effective search space: 8363332845
effective search space used: 8363332845
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)