Query 043168
Match_columns 473
No_of_seqs 132 out of 1478
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 23:59:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043168.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043168hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 7.3E-63 2.5E-67 493.7 39.3 417 4-463 12-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 1.1E-56 3.8E-61 456.3 44.0 435 1-467 1-472 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 3.9E-57 1.3E-61 461.1 37.5 432 4-464 7-479 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 9.2E-56 3.1E-60 446.7 39.3 420 4-464 6-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 1.2E-54 4E-59 439.8 37.4 416 5-463 9-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 3.9E-43 1.3E-47 353.2 33.1 386 3-462 10-420 (424)
7 4amg_A Snogd; transferase, pol 100.0 3.5E-43 1.2E-47 350.7 30.2 352 4-438 21-383 (400)
8 1iir_A Glycosyltransferase GTF 100.0 2.8E-40 9.6E-45 331.4 27.1 357 6-438 1-383 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 9.8E-39 3.4E-43 320.2 34.4 375 4-462 19-412 (415)
10 1rrv_A Glycosyltransferase GTF 100.0 1.3E-39 4.6E-44 326.6 27.6 376 6-463 1-400 (416)
11 3h4t_A Glycosyltransferase GTF 100.0 5.1E-39 1.7E-43 320.9 31.0 365 6-464 1-383 (404)
12 3ia7_A CALG4; glycosysltransfe 100.0 4E-38 1.4E-42 314.2 34.5 379 5-463 4-398 (402)
13 2yjn_A ERYCIII, glycosyltransf 100.0 6.1E-38 2.1E-42 316.9 32.3 384 5-462 20-434 (441)
14 2p6p_A Glycosyl transferase; X 100.0 5.8E-37 2E-41 304.1 30.8 365 6-463 1-379 (384)
15 2iyf_A OLED, oleandomycin glyc 100.0 7E-36 2.4E-40 300.9 29.8 376 5-461 7-397 (430)
16 4fzr_A SSFS6; structural genom 100.0 2.1E-35 7.2E-40 294.4 25.3 350 4-438 14-383 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 1E-34 3.4E-39 289.5 30.0 358 4-459 19-393 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 2.1E-33 7.3E-38 279.1 28.3 364 6-460 2-385 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 2.2E-31 7.5E-36 266.4 30.4 369 4-462 19-407 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 1.3E-29 4.3E-34 249.0 30.1 317 5-431 2-336 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 6.2E-27 2.1E-31 204.5 16.0 164 246-438 5-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 7E-20 2.4E-24 179.6 27.9 305 6-420 7-324 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 4.7E-15 1.6E-19 138.4 22.6 117 262-398 157-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 3.2E-15 1.1E-19 133.9 11.1 134 260-416 26-196 (224)
25 1v4v_A UDP-N-acetylglucosamine 99.4 3.1E-11 1.1E-15 118.4 21.7 130 262-420 198-335 (376)
26 3c48_A Predicted glycosyltrans 99.3 3.1E-09 1.1E-13 106.2 31.8 98 328-437 305-409 (438)
27 2gek_A Phosphatidylinositol ma 99.3 2.7E-10 9.4E-15 112.6 22.5 144 264-434 209-364 (406)
28 3ot5_A UDP-N-acetylglucosamine 99.3 3.1E-10 1.1E-14 112.2 21.2 79 328-420 281-362 (403)
29 3dzc_A UDP-N-acetylglucosamine 99.3 1.2E-10 4.1E-15 115.0 17.8 79 328-420 287-368 (396)
30 3okp_A GDP-mannose-dependent a 99.3 5.3E-09 1.8E-13 102.7 28.7 163 264-464 199-378 (394)
31 2r60_A Glycosyl transferase, g 99.2 5.6E-09 1.9E-13 106.4 26.4 97 328-436 334-441 (499)
32 3fro_A GLGA glycogen synthase; 99.2 1.4E-08 4.7E-13 101.2 28.3 164 264-464 252-429 (439)
33 1vgv_A UDP-N-acetylglucosamine 99.1 4E-09 1.4E-13 103.5 21.5 132 261-420 204-343 (384)
34 2jjm_A Glycosyl transferase, g 99.1 3.6E-08 1.2E-12 97.1 26.4 94 329-434 267-365 (394)
35 2iw1_A Lipopolysaccharide core 99.1 1.4E-07 4.6E-12 91.9 29.0 148 262-436 195-354 (374)
36 3beo_A UDP-N-acetylglucosamine 99.1 2.8E-08 9.5E-13 97.0 23.8 78 329-420 263-343 (375)
37 4hwg_A UDP-N-acetylglucosamine 98.9 4.2E-08 1.4E-12 96.1 18.8 132 262-421 203-344 (385)
38 2x6q_A Trehalose-synthase TRET 98.9 1E-06 3.5E-11 87.2 27.0 93 328-434 292-394 (416)
39 2iuy_A Avigt4, glycosyltransfe 98.9 1.8E-07 6.1E-12 90.1 20.2 125 265-418 164-307 (342)
40 3s28_A Sucrose synthase 1; gly 98.6 1.5E-05 5.2E-10 84.7 25.6 95 328-434 639-749 (816)
41 2xci_A KDO-transferase, 3-deox 98.5 3.6E-05 1.2E-09 75.0 24.0 98 330-438 261-364 (374)
42 2vsy_A XCC0866; transferase, g 98.5 0.00033 1.1E-08 72.1 31.7 97 329-434 434-537 (568)
43 2qzs_A Glycogen synthase; glyc 98.3 5.7E-05 1.9E-09 76.2 22.3 133 264-420 293-445 (485)
44 1rzu_A Glycogen synthase 1; gl 98.3 6.3E-05 2.1E-09 75.9 22.1 132 264-420 292-444 (485)
45 2f9f_A First mannosyl transfer 98.3 7.5E-06 2.6E-10 70.7 12.9 128 264-420 24-163 (177)
46 3oy2_A Glycosyltransferase B73 98.1 0.00062 2.1E-08 66.9 23.7 88 331-432 256-368 (413)
47 2hy7_A Glucuronosyltransferase 98.0 0.001 3.4E-08 65.5 22.6 75 328-420 264-353 (406)
48 3qhp_A Type 1 capsular polysac 97.8 0.00032 1.1E-08 59.3 12.9 145 263-437 2-158 (166)
49 2bfw_A GLGA glycogen synthase; 97.8 0.0006 2.1E-08 59.5 14.4 93 330-435 96-197 (200)
50 4gyw_A UDP-N-acetylglucosamine 97.6 0.0017 5.8E-08 68.7 17.7 152 261-430 521-679 (723)
51 3tov_A Glycosyl transferase fa 97.5 0.0043 1.5E-07 59.6 17.9 107 3-143 6-115 (349)
52 3q3e_A HMW1C-like glycosyltran 97.5 0.0014 4.9E-08 66.7 14.3 151 263-433 441-602 (631)
53 1psw_A ADP-heptose LPS heptosy 97.2 0.035 1.2E-06 52.9 19.8 103 6-142 1-105 (348)
54 3rhz_A GTF3, nucleotide sugar 97.0 0.0017 5.8E-08 62.0 8.5 95 330-438 215-321 (339)
55 2gt1_A Lipopolysaccharide hept 96.2 0.18 6.2E-06 47.4 16.5 46 6-51 1-47 (326)
56 2x0d_A WSAF; GT4 family, trans 93.4 0.15 5.1E-06 49.9 7.4 80 328-420 294-380 (413)
57 3vue_A GBSS-I, granule-bound s 91.2 1.1 3.9E-05 45.2 10.9 136 264-418 328-476 (536)
58 2iz6_A Molybdenum cofactor car 88.5 8.6 0.00029 32.3 12.4 79 331-418 91-173 (176)
59 2wqk_A 5'-nucleotidase SURE; S 86.6 1.4 4.8E-05 39.5 6.8 39 6-47 2-40 (251)
60 3t5t_A Putative glycosyltransf 84.2 35 0.0012 33.8 17.0 113 330-466 353-474 (496)
61 3vot_A L-amino acid ligase, BL 83.6 2.7 9.2E-05 40.9 7.9 37 1-43 1-37 (425)
62 1g5t_A COB(I)alamin adenosyltr 82.3 10 0.00034 32.5 10.0 39 5-44 28-66 (196)
63 2phj_A 5'-nucleotidase SURE; S 81.7 4.2 0.00014 36.2 7.6 41 6-49 2-42 (251)
64 3auf_A Glycinamide ribonucleot 81.6 10 0.00035 33.4 10.1 104 4-146 21-131 (229)
65 3nb0_A Glycogen [starch] synth 81.5 5.6 0.00019 41.1 9.3 88 340-436 513-616 (725)
66 3iqw_A Tail-anchored protein t 80.4 7.5 0.00026 36.5 9.4 42 5-47 15-57 (334)
67 3tqr_A Phosphoribosylglycinami 80.0 7.8 0.00027 33.7 8.7 109 1-147 1-114 (215)
68 1ccw_A Protein (glutamate muta 80.0 2.3 7.8E-05 34.2 4.9 38 5-43 3-40 (137)
69 3zqu_A Probable aromatic acid 79.8 2.2 7.5E-05 37.0 5.0 48 1-51 1-48 (209)
70 3lqk_A Dipicolinate synthase s 76.1 3 0.0001 35.9 4.8 49 1-50 3-51 (201)
71 2ywr_A Phosphoribosylglycinami 75.6 11 0.00037 32.8 8.3 102 6-146 2-110 (216)
72 3vue_A GBSS-I, granule-bound s 75.4 1.8 6.2E-05 43.7 3.7 37 4-43 8-52 (536)
73 2x0d_A WSAF; GT4 family, trans 74.8 1.7 5.9E-05 42.2 3.3 40 4-44 45-89 (413)
74 3qjg_A Epidermin biosynthesis 74.5 4 0.00014 34.3 5.0 45 5-51 5-49 (175)
75 3av3_A Phosphoribosylglycinami 73.9 22 0.00076 30.7 9.9 104 5-147 3-113 (212)
76 4dim_A Phosphoribosylglycinami 72.8 16 0.00053 35.0 9.6 34 4-43 6-39 (403)
77 2pn1_A Carbamoylphosphate synt 71.7 12 0.00043 34.5 8.4 34 3-43 2-37 (331)
78 3mcu_A Dipicolinate synthase, 71.7 3.8 0.00013 35.5 4.3 48 1-50 1-49 (207)
79 3da8_A Probable 5'-phosphoribo 71.7 5.8 0.0002 34.5 5.5 104 4-146 11-119 (215)
80 2yxb_A Coenzyme B12-dependent 71.6 4.4 0.00015 33.5 4.6 39 4-43 17-55 (161)
81 3dfz_A SIRC, precorrin-2 dehyd 70.9 3.6 0.00012 36.1 4.1 152 255-440 26-186 (223)
82 4ds3_A Phosphoribosylglycinami 70.5 18 0.00061 31.2 8.4 105 3-146 5-116 (209)
83 2bw0_A 10-FTHFDH, 10-formyltet 70.3 14 0.00047 34.5 8.2 41 100-147 89-130 (329)
84 4dzz_A Plasmid partitioning pr 68.8 21 0.00071 30.1 8.6 37 7-44 3-40 (206)
85 3q0i_A Methionyl-tRNA formyltr 68.2 8.6 0.00029 35.7 6.2 36 4-45 6-41 (318)
86 1fmt_A Methionyl-tRNA FMet for 67.6 26 0.00087 32.4 9.3 34 4-43 2-35 (314)
87 1jkx_A GART;, phosphoribosylgl 67.4 35 0.0012 29.5 9.6 101 7-146 2-109 (212)
88 2ejb_A Probable aromatic acid 67.3 7.6 0.00026 33.0 5.2 44 6-51 2-45 (189)
89 1y80_A Predicted cobalamin bin 67.1 8.1 0.00028 33.4 5.6 43 5-48 88-130 (210)
90 1g63_A Epidermin modifying enz 66.5 6 0.00021 33.4 4.4 44 6-51 3-46 (181)
91 1uqt_A Alpha, alpha-trehalose- 65.1 32 0.0011 33.9 10.1 107 333-465 336-454 (482)
92 3ih5_A Electron transfer flavo 64.7 12 0.0004 32.6 6.1 108 5-144 3-121 (217)
93 3io3_A DEHA2D07832P; chaperone 64.6 13 0.00043 35.1 6.7 41 5-46 17-60 (348)
94 3n7t_A Macrophage binding prot 63.5 12 0.00042 33.3 6.1 42 1-43 5-57 (247)
95 3kcq_A Phosphoribosylglycinami 63.3 41 0.0014 29.1 9.2 100 4-147 7-113 (215)
96 2i2x_B MTAC, methyltransferase 62.1 9.8 0.00033 34.1 5.2 38 4-42 122-159 (258)
97 1sbz_A Probable aromatic acid 60.6 9.1 0.00031 32.8 4.5 43 7-51 2-45 (197)
98 3tqq_A Methionyl-tRNA formyltr 60.2 7.1 0.00024 36.2 4.0 36 5-46 2-37 (314)
99 3igf_A ALL4481 protein; two-do 60.0 5.8 0.0002 37.8 3.5 35 7-42 3-38 (374)
100 1kjq_A GART 2, phosphoribosylg 60.0 58 0.002 30.7 10.8 38 1-44 7-44 (391)
101 3rfo_A Methionyl-tRNA formyltr 59.0 76 0.0026 29.2 10.8 36 4-45 3-38 (317)
102 3qxc_A Dethiobiotin synthetase 58.8 80 0.0027 27.7 10.6 35 6-41 21-57 (242)
103 3bgw_A DNAB-like replicative h 58.6 15 0.0005 36.0 6.2 43 7-50 199-241 (444)
104 1xmp_A PURE, phosphoribosylami 58.5 77 0.0026 26.1 10.9 143 262-441 11-163 (170)
105 2q6t_A DNAB replication FORK h 58.4 13 0.00045 36.2 5.9 43 8-50 203-245 (444)
106 2pju_A Propionate catabolism o 58.2 22 0.00077 31.0 6.7 67 348-419 64-153 (225)
107 1l5x_A SurviVal protein E; str 57.8 20 0.0007 32.4 6.5 40 7-49 2-41 (280)
108 3ezx_A MMCP 1, monomethylamine 57.6 14 0.00048 32.1 5.3 43 5-48 92-134 (215)
109 1id1_A Putative potassium chan 57.2 7.9 0.00027 31.3 3.4 34 4-43 2-35 (153)
110 1mvl_A PPC decarboxylase athal 56.9 15 0.0005 31.8 5.2 44 5-51 19-62 (209)
111 2q5c_A NTRC family transcripti 56.4 17 0.00059 31.0 5.6 69 346-419 50-141 (196)
112 1kjn_A MTH0777; hypotethical p 56.4 14 0.00048 29.7 4.5 45 8-53 10-55 (157)
113 1rcu_A Conserved hypothetical 54.8 92 0.0031 26.4 9.8 97 250-375 48-150 (195)
114 1p3y_1 MRSD protein; flavoprot 54.2 8.2 0.00028 33.0 3.1 45 5-51 8-52 (194)
115 3ouz_A Biotin carboxylase; str 53.8 38 0.0013 32.8 8.4 34 4-43 5-38 (446)
116 2qyt_A 2-dehydropantoate 2-red 53.0 6 0.00021 36.4 2.3 37 1-43 4-46 (317)
117 1meo_A Phosophoribosylglycinam 52.8 95 0.0032 26.6 9.8 103 6-146 1-109 (209)
118 2ixd_A LMBE-related protein; h 52.6 45 0.0015 29.4 7.9 21 97-124 84-104 (242)
119 1yt5_A Inorganic polyphosphate 51.7 12 0.0004 33.6 3.9 53 348-420 42-97 (258)
120 4grd_A N5-CAIR mutase, phospho 51.2 1E+02 0.0035 25.4 9.8 145 261-441 11-164 (173)
121 3bh0_A DNAB-like replicative h 50.5 24 0.00082 32.5 6.0 41 8-49 71-111 (315)
122 4gmf_A Yersiniabactin biosynth 50.4 49 0.0017 31.3 8.2 63 336-398 57-126 (372)
123 3n0v_A Formyltetrahydrofolate 50.3 1.4E+02 0.0047 27.0 10.9 106 3-147 88-197 (286)
124 3o1l_A Formyltetrahydrofolate 50.0 1.2E+02 0.0041 27.7 10.4 105 4-147 104-212 (302)
125 2b8t_A Thymidine kinase; deoxy 49.8 59 0.002 28.2 8.0 38 6-44 12-50 (223)
126 1qzu_A Hypothetical protein MD 49.1 18 0.00061 31.2 4.4 49 2-51 16-64 (206)
127 3dfu_A Uncharacterized protein 48.4 15 0.00052 32.3 4.0 37 1-43 2-38 (232)
128 3p9x_A Phosphoribosylglycinami 47.4 75 0.0026 27.3 8.2 103 6-146 3-111 (211)
129 3to5_A CHEY homolog; alpha(5)b 47.4 30 0.001 27.2 5.3 42 100-148 47-97 (134)
130 2hy5_B Intracellular sulfur ox 46.9 36 0.0012 27.0 5.7 50 1-51 1-53 (136)
131 3l4e_A Uncharacterized peptida 46.3 53 0.0018 28.1 7.1 47 251-297 17-63 (206)
132 2i2c_A Probable inorganic poly 46.2 16 0.00055 33.0 3.9 28 348-375 36-69 (272)
133 1pjq_A CYSG, siroheme synthase 44.7 98 0.0033 30.1 9.6 149 261-440 12-168 (457)
134 3k96_A Glycerol-3-phosphate de 44.4 12 0.00041 35.4 2.9 45 1-51 25-70 (356)
135 1wcv_1 SOJ, segregation protei 43.8 19 0.00065 31.9 4.0 43 1-44 1-45 (257)
136 2r8r_A Sensor protein; KDPD, P 43.4 27 0.00092 30.6 4.7 39 5-44 6-44 (228)
137 1f0y_A HCDH, L-3-hydroxyacyl-C 43.4 17 0.00057 33.3 3.6 37 1-43 11-47 (302)
138 3s2u_A UDP-N-acetylglucosamine 43.2 50 0.0017 31.0 7.1 32 342-373 87-121 (365)
139 1o97_C Electron transferring f 42.7 38 0.0013 30.4 5.8 41 98-145 100-146 (264)
140 3ip3_A Oxidoreductase, putativ 41.7 1.2E+02 0.004 27.9 9.4 58 335-393 55-120 (337)
141 3mc3_A DSRE/DSRF-like family p 41.6 45 0.0015 26.2 5.5 46 5-51 15-63 (134)
142 2lpm_A Two-component response 41.5 18 0.00063 28.1 3.1 29 117-145 53-86 (123)
143 3e9m_A Oxidoreductase, GFO/IDH 41.4 1.9E+02 0.0064 26.4 10.7 109 264-398 8-125 (330)
144 2p90_A Hypothetical protein CG 41.4 2.1E+02 0.0073 26.2 10.9 137 262-420 102-252 (319)
145 2yvq_A Carbamoyl-phosphate syn 41.3 48 0.0016 26.5 5.7 97 9-144 27-131 (143)
146 3llv_A Exopolyphosphatase-rela 41.2 14 0.00048 29.2 2.4 33 5-43 6-38 (141)
147 3lyh_A Cobalamin (vitamin B12) 41.2 95 0.0032 23.8 7.4 36 262-297 6-41 (126)
148 1uan_A Hypothetical protein TT 40.7 82 0.0028 27.3 7.6 21 97-124 82-102 (227)
149 2q5c_A NTRC family transcripti 40.7 43 0.0015 28.4 5.6 30 117-149 142-171 (196)
150 3obi_A Formyltetrahydrofolate 40.7 1.5E+02 0.005 26.8 9.5 105 4-147 88-197 (288)
151 3lrx_A Putative hydrogenase; a 40.3 24 0.00082 28.7 3.8 35 6-44 24-58 (158)
152 1efv_B Electron transfer flavo 39.7 45 0.0015 29.7 5.8 41 98-145 104-150 (255)
153 1p9o_A Phosphopantothenoylcyst 39.7 19 0.00064 33.3 3.3 36 8-44 40-89 (313)
154 1v5e_A Pyruvate oxidase; oxido 39.7 1E+02 0.0034 31.2 9.1 80 280-374 7-101 (590)
155 2bln_A Protein YFBG; transfera 39.4 89 0.003 28.6 7.9 40 101-147 66-106 (305)
156 3hn2_A 2-dehydropantoate 2-red 39.3 30 0.001 31.8 4.7 39 6-51 3-41 (312)
157 3q2i_A Dehydrogenase; rossmann 39.2 2.1E+02 0.007 26.4 10.8 127 263-420 15-151 (354)
158 1efp_B ETF, protein (electron 39.2 45 0.0015 29.6 5.7 40 99-145 102-147 (252)
159 1qkk_A DCTD, C4-dicarboxylate 39.2 1.3E+02 0.0046 23.3 14.4 49 366-420 74-122 (155)
160 3mjf_A Phosphoribosylamine--gl 39.2 61 0.0021 31.3 7.1 31 5-41 3-34 (431)
161 3pdi_B Nitrogenase MOFE cofact 39.0 32 0.0011 33.7 5.1 34 101-144 366-399 (458)
162 3ghy_A Ketopantoate reductase 38.7 20 0.00068 33.4 3.4 41 5-51 3-43 (335)
163 2qs7_A Uncharacterized protein 38.7 34 0.0012 27.4 4.4 45 6-51 8-53 (144)
164 1t35_A Hypothetical protein YV 37.3 1.3E+02 0.0044 25.3 8.0 101 251-375 24-135 (191)
165 2w70_A Biotin carboxylase; lig 37.2 92 0.0031 30.0 8.2 31 6-42 3-33 (449)
166 2a33_A Hypothetical protein; s 37.0 1.4E+02 0.0049 25.6 8.4 45 331-375 93-147 (215)
167 4e5s_A MCCFLIKE protein (BA_56 37.0 59 0.002 30.2 6.3 72 276-375 63-136 (331)
168 3nrb_A Formyltetrahydrofolate 36.9 2.4E+02 0.0081 25.4 12.0 108 4-147 87-196 (287)
169 2qk4_A Trifunctional purine bi 36.8 1.8E+02 0.0062 28.0 10.2 33 5-42 24-56 (452)
170 3kkl_A Probable chaperone prot 36.4 50 0.0017 29.1 5.5 40 1-43 1-51 (244)
171 2vqe_B 30S ribosomal protein S 36.3 1.1E+02 0.0038 27.1 7.6 32 117-148 158-191 (256)
172 1q57_A DNA primase/helicase; d 36.1 48 0.0016 32.8 5.9 41 8-49 245-286 (503)
173 2dzd_A Pyruvate carboxylase; b 35.8 1.6E+02 0.0053 28.5 9.6 38 1-44 1-39 (461)
174 3hwr_A 2-dehydropantoate 2-red 35.8 26 0.00089 32.3 3.7 42 4-51 18-59 (318)
175 3afo_A NADH kinase POS5; alpha 35.7 27 0.00092 33.4 3.8 34 340-375 109-147 (388)
176 3i83_A 2-dehydropantoate 2-red 35.7 34 0.0012 31.5 4.5 39 6-51 3-41 (320)
177 3lou_A Formyltetrahydrofolate 35.5 2.5E+02 0.0086 25.3 11.7 106 3-147 93-202 (292)
178 3bul_A Methionine synthase; tr 35.4 46 0.0016 33.6 5.6 43 4-47 97-139 (579)
179 3s40_A Diacylglycerol kinase; 35.4 93 0.0032 28.3 7.4 28 348-375 64-97 (304)
180 2ozl_B PDHE1-B, pyruvate dehyd 35.4 1.6E+02 0.0053 27.4 9.0 17 402-418 324-340 (341)
181 4g6h_A Rotenone-insensitive NA 35.2 23 0.0008 35.1 3.5 35 4-44 41-75 (502)
182 1ydh_A AT5G11950; structural g 35.1 2.2E+02 0.0074 24.5 11.4 44 331-375 89-143 (216)
183 2vo1_A CTP synthase 1; pyrimid 34.5 37 0.0013 30.4 4.1 43 4-47 21-66 (295)
184 3db2_A Putative NADPH-dependen 34.3 1.8E+02 0.0061 26.9 9.4 126 263-419 7-141 (354)
185 4huj_A Uncharacterized protein 34.3 22 0.00075 30.8 2.7 33 4-42 22-54 (220)
186 2vou_A 2,6-dihydroxypyridine h 34.0 33 0.0011 32.5 4.3 36 1-42 1-36 (397)
187 1bg6_A N-(1-D-carboxylethyl)-L 33.6 30 0.001 32.2 3.9 33 4-42 3-35 (359)
188 3c24_A Putative oxidoreductase 33.6 37 0.0013 30.5 4.3 33 4-42 10-43 (286)
189 1xrs_B D-lysine 5,6-aminomutas 33.5 31 0.001 30.9 3.6 43 4-47 119-170 (262)
190 3ic5_A Putative saccharopine d 33.1 31 0.0011 25.7 3.2 33 4-42 4-37 (118)
191 2ew2_A 2-dehydropantoate 2-red 33.0 31 0.0011 31.4 3.7 41 5-51 3-44 (316)
192 3lyu_A Putative hydrogenase; t 32.9 40 0.0014 26.8 3.9 35 6-44 19-53 (142)
193 2zbw_A Thioredoxin reductase; 32.6 25 0.00087 32.2 3.1 37 1-43 1-37 (335)
194 2an1_A Putative kinase; struct 32.5 24 0.00082 32.1 2.8 28 348-375 64-95 (292)
195 2r85_A PURP protein PF1517; AT 32.5 44 0.0015 30.6 4.7 34 5-45 2-35 (334)
196 3sbx_A Putative uncharacterize 32.4 1.8E+02 0.0061 24.4 8.0 43 332-375 93-146 (189)
197 1ozh_A ALS, acetolactate synth 32.2 1.8E+02 0.0061 29.1 9.5 79 280-374 14-106 (566)
198 3tsa_A SPNG, NDP-rhamnosyltran 32.1 66 0.0022 30.1 6.0 30 345-376 114-144 (391)
199 3lqk_A Dipicolinate synthase s 31.8 2.4E+02 0.008 23.9 10.4 70 350-420 90-187 (201)
200 2xvy_A Chelatase, putative; me 31.4 1.1E+02 0.0039 27.0 7.2 39 262-300 10-50 (269)
201 3l7i_A Teichoic acid biosynthe 31.2 81 0.0028 32.8 7.0 115 333-463 603-719 (729)
202 1rw7_A YDR533CP; alpha-beta sa 31.1 82 0.0028 27.5 6.0 37 6-43 4-51 (243)
203 2lnd_A De novo designed protei 30.9 88 0.003 21.9 4.7 48 366-418 50-100 (112)
204 1u0t_A Inorganic polyphosphate 30.8 25 0.00086 32.3 2.7 28 348-375 76-107 (307)
205 3sr3_A Microcin immunity prote 30.8 80 0.0027 29.3 6.1 72 276-375 64-137 (336)
206 3zzm_A Bifunctional purine bio 30.7 63 0.0022 31.8 5.4 50 5-65 9-58 (523)
207 3kjh_A CO dehydrogenase/acetyl 30.6 39 0.0013 29.3 3.9 37 7-44 2-38 (254)
208 3fwz_A Inner membrane protein 30.4 30 0.001 27.2 2.8 34 5-44 7-40 (140)
209 3eag_A UDP-N-acetylmuramate:L- 30.4 52 0.0018 30.4 4.8 34 4-42 3-36 (326)
210 2rjn_A Response regulator rece 30.3 1.9E+02 0.0064 22.3 9.7 49 366-420 78-127 (154)
211 1jx7_A Hypothetical protein YC 30.2 73 0.0025 23.8 4.9 35 16-51 15-51 (117)
212 3e18_A Oxidoreductase; dehydro 30.1 3.3E+02 0.011 25.1 11.6 107 264-398 8-123 (359)
213 3g0o_A 3-hydroxyisobutyrate de 30.0 31 0.0011 31.4 3.2 33 4-42 6-38 (303)
214 3pfn_A NAD kinase; structural 30.0 28 0.00095 32.9 2.8 26 348-373 109-138 (365)
215 2r6a_A DNAB helicase, replicat 29.9 40 0.0014 32.8 4.1 43 7-49 205-247 (454)
216 3ia7_A CALG4; glycosysltransfe 29.8 1.5E+02 0.005 27.6 8.1 34 264-299 7-40 (402)
217 3qjg_A Epidermin biosynthesis 29.2 2.4E+02 0.0082 23.2 8.6 114 262-393 6-142 (175)
218 2gk4_A Conserved hypothetical 29.2 83 0.0029 27.5 5.6 23 21-44 31-53 (232)
219 2g1u_A Hypothetical protein TM 29.2 60 0.0021 25.9 4.5 33 5-43 19-51 (155)
220 3ox4_A Alcohol dehydrogenase 2 28.8 51 0.0018 31.3 4.5 45 251-297 21-65 (383)
221 3qvl_A Putative hydantoin race 28.8 2.9E+02 0.01 24.1 9.6 37 6-43 2-39 (245)
222 1ulz_A Pyruvate carboxylase N- 28.6 1.5E+02 0.0053 28.4 8.1 32 6-43 3-34 (451)
223 2yrx_A Phosphoribosylglycinami 28.4 2.7E+02 0.0092 26.7 9.9 34 4-42 20-53 (451)
224 1lss_A TRK system potassium up 28.4 38 0.0013 26.1 3.1 32 5-42 4-35 (140)
225 1iow_A DD-ligase, DDLB, D-ALA\ 28.3 72 0.0025 28.7 5.4 38 5-43 2-43 (306)
226 3u3x_A Oxidoreductase; structu 28.3 2.4E+02 0.0081 26.2 9.2 110 263-397 28-145 (361)
227 1c0p_A D-amino acid oxidase; a 28.3 51 0.0018 30.6 4.4 36 1-42 2-37 (363)
228 3rkr_A Short chain oxidoreduct 28.2 70 0.0024 28.1 5.2 38 1-42 24-61 (262)
229 4b4o_A Epimerase family protei 28.1 42 0.0014 30.2 3.7 31 7-42 2-32 (298)
230 1y56_B Sarcosine oxidase; dehy 28.1 36 0.0012 31.9 3.4 37 1-43 1-37 (382)
231 1oi4_A Hypothetical protein YH 27.8 1.1E+02 0.0038 25.5 6.1 40 3-44 21-60 (193)
232 2vpq_A Acetyl-COA carboxylase; 27.8 1.2E+02 0.0042 29.1 7.2 32 6-43 2-33 (451)
233 3bbn_B Ribosomal protein S2; s 27.6 2.1E+02 0.0071 24.9 7.8 31 117-147 157-189 (231)
234 1kyq_A Met8P, siroheme biosynt 27.4 3.3E+02 0.011 24.3 10.2 38 403-441 171-211 (274)
235 3qha_A Putative oxidoreductase 27.4 35 0.0012 31.0 3.0 32 5-42 15-46 (296)
236 3gi1_A LBP, laminin-binding pr 26.9 2.5E+02 0.0084 25.2 8.6 79 34-145 178-258 (286)
237 3rc1_A Sugar 3-ketoreductase; 26.9 2.2E+02 0.0075 26.3 8.6 109 264-398 30-147 (350)
238 2q28_A Oxalyl-COA decarboxylas 26.9 2E+02 0.0068 28.7 8.8 27 348-374 71-103 (564)
239 3uhj_A Probable glycerol dehyd 26.8 1.1E+02 0.0037 29.0 6.4 93 250-376 42-139 (387)
240 1ybh_A Acetolactate synthase, 26.8 2.2E+02 0.0074 28.6 9.1 27 348-374 76-108 (590)
241 3u7q_A Nitrogenase molybdenum- 26.5 62 0.0021 32.0 4.7 35 100-144 407-441 (492)
242 1t9b_A Acetolactate synthase, 26.4 2.3E+02 0.0079 29.1 9.3 82 278-374 83-178 (677)
243 1z82_A Glycerol-3-phosphate de 26.4 49 0.0017 30.6 3.9 41 5-51 14-55 (335)
244 1mio_B Nitrogenase molybdenum 26.3 54 0.0019 32.0 4.3 34 101-144 376-409 (458)
245 3grc_A Sensor protein, kinase; 26.2 2.1E+02 0.0071 21.5 10.3 50 366-420 79-128 (140)
246 3nrc_A Enoyl-[acyl-carrier-pro 26.2 89 0.003 27.8 5.5 41 1-44 21-62 (280)
247 3v2h_A D-beta-hydroxybutyrate 26.1 72 0.0025 28.5 4.9 34 5-42 24-57 (281)
248 3end_A Light-independent proto 26.1 63 0.0021 29.3 4.5 37 6-43 42-78 (307)
249 1w85_B Pyruvate dehydrogenase 26.1 1.6E+02 0.0054 27.0 7.3 17 402-418 307-323 (324)
250 1hjr_A Holliday junction resol 25.9 84 0.0029 25.6 4.7 49 92-147 41-104 (158)
251 4ezb_A Uncharacterized conserv 25.8 38 0.0013 31.2 2.9 33 5-43 24-57 (317)
252 3gpi_A NAD-dependent epimerase 25.8 35 0.0012 30.5 2.7 33 5-43 3-35 (286)
253 3m2t_A Probable dehydrogenase; 25.8 3.5E+02 0.012 24.9 9.8 61 336-397 57-125 (359)
254 4h1h_A LMO1638 protein; MCCF-l 25.7 1.2E+02 0.0041 28.0 6.4 26 276-301 63-88 (327)
255 3qsg_A NAD-binding phosphogluc 25.6 39 0.0013 31.0 3.0 34 3-42 22-56 (312)
256 1wrd_A TOM1, target of MYB pro 25.4 2E+02 0.0069 21.3 6.4 30 404-440 3-32 (103)
257 3dm5_A SRP54, signal recogniti 25.3 70 0.0024 31.1 4.8 42 5-47 100-141 (443)
258 2rdm_A Response regulator rece 25.0 1.3E+02 0.0045 22.3 5.7 37 1-42 1-37 (132)
259 3c3m_A Response regulator rece 24.9 1E+02 0.0035 23.4 5.1 31 117-147 47-86 (138)
260 1zl0_A Hypothetical protein PA 24.8 1.4E+02 0.0049 27.3 6.6 73 276-376 65-139 (311)
261 4hcj_A THIJ/PFPI domain protei 24.8 69 0.0023 26.6 4.1 42 1-44 4-45 (177)
262 3pxx_A Carveol dehydrogenase; 24.7 85 0.0029 27.9 5.1 38 1-42 5-42 (287)
263 3uce_A Dehydrogenase; rossmann 24.7 64 0.0022 27.5 4.1 37 1-41 1-37 (223)
264 3s55_A Putative short-chain de 24.6 82 0.0028 28.0 5.0 38 1-42 5-42 (281)
265 3b2n_A Uncharacterized protein 24.6 1.3E+02 0.0043 22.7 5.5 32 117-148 49-87 (133)
266 1ehi_A LMDDL2, D-alanine:D-lac 24.6 68 0.0023 30.3 4.5 37 5-42 3-44 (377)
267 2xj4_A MIPZ; replication, cell 24.5 70 0.0024 28.7 4.5 37 7-44 5-43 (286)
268 3o26_A Salutaridine reductase; 24.5 73 0.0025 28.6 4.6 34 5-42 11-44 (311)
269 3enk_A UDP-glucose 4-epimerase 24.4 64 0.0022 29.5 4.3 34 4-42 4-37 (341)
270 4hn9_A Iron complex transport 24.4 79 0.0027 29.1 4.9 36 104-146 110-145 (335)
271 2qv7_A Diacylglycerol kinase D 24.4 1.6E+02 0.0056 27.0 7.1 28 348-375 81-114 (337)
272 4e12_A Diketoreductase; oxidor 24.2 66 0.0023 28.9 4.2 33 4-42 3-35 (283)
273 1cp2_A CP2, nitrogenase iron p 24.1 66 0.0023 28.3 4.2 36 7-43 3-38 (269)
274 3cky_A 2-hydroxymethyl glutara 24.0 61 0.0021 29.2 4.0 35 1-42 1-35 (301)
275 4ep4_A Crossover junction endo 24.0 1.8E+02 0.006 23.9 6.3 52 90-148 43-109 (166)
276 2ph1_A Nucleotide-binding prot 24.0 74 0.0025 28.0 4.5 38 7-45 20-58 (262)
277 1e7w_A Pteridine reductase; di 24.0 79 0.0027 28.4 4.7 33 5-41 8-40 (291)
278 1v95_A Nuclear receptor coacti 23.9 52 0.0018 25.8 2.9 45 370-417 11-57 (130)
279 2c31_A Oxalyl-COA decarboxylas 23.7 2E+02 0.0068 28.7 8.1 27 348-374 73-105 (568)
280 3lq1_A 2-succinyl-5-enolpyruvy 23.7 4.5E+02 0.015 26.2 10.8 81 279-374 13-107 (578)
281 1dhr_A Dihydropteridine reduct 23.7 81 0.0028 27.3 4.6 33 6-42 7-39 (241)
282 1wek_A Hypothetical protein TT 23.7 2.4E+02 0.0081 24.2 7.4 86 263-373 69-168 (217)
283 4b4k_A N5-carboxyaminoimidazol 23.7 3.1E+02 0.011 22.7 11.5 143 262-441 22-174 (181)
284 4gi5_A Quinone reductase; prot 23.6 1.2E+02 0.004 27.4 5.6 38 3-41 20-60 (280)
285 2etv_A Iron(III) ABC transport 23.4 74 0.0025 29.5 4.5 35 104-145 90-125 (346)
286 3rsc_A CALG2; TDP, enediyne, s 23.3 1.4E+02 0.0049 27.9 6.7 36 263-300 22-57 (415)
287 1u0t_A Inorganic polyphosphate 23.3 78 0.0027 28.9 4.5 40 1-42 1-41 (307)
288 2x7j_A 2-succinyl-5-enolpyruvy 23.3 2.7E+02 0.0093 28.0 9.1 82 278-374 32-127 (604)
289 2zts_A Putative uncharacterize 23.2 69 0.0024 27.6 4.1 43 7-50 32-75 (251)
290 3l6u_A ABC-type sugar transpor 23.0 1.3E+02 0.0045 26.4 6.1 37 264-300 10-47 (293)
291 2an1_A Putative kinase; struct 23.0 72 0.0025 28.8 4.2 40 1-41 1-41 (292)
292 3lp8_A Phosphoribosylamine-gly 23.0 3.2E+02 0.011 26.2 9.2 32 4-41 20-52 (442)
293 3pdi_A Nitrogenase MOFE cofact 22.9 57 0.0019 32.1 3.7 35 100-144 391-425 (483)
294 1spx_A Short-chain reductase f 22.9 80 0.0027 28.0 4.5 38 1-42 1-38 (278)
295 2hy5_A Putative sulfurtransfer 22.8 1.5E+02 0.0051 22.8 5.5 41 9-50 5-48 (130)
296 3icc_A Putative 3-oxoacyl-(acy 22.6 1.3E+02 0.0046 25.9 5.9 36 3-42 4-39 (255)
297 4fzr_A SSFS6; structural genom 22.5 1.5E+02 0.0052 27.6 6.7 34 264-299 18-51 (398)
298 2hmt_A YUAA protein; RCK, KTN, 22.5 46 0.0016 25.8 2.5 32 5-42 6-37 (144)
299 3md9_A Hemin-binding periplasm 22.4 82 0.0028 27.5 4.4 35 104-145 53-89 (255)
300 4dll_A 2-hydroxy-3-oxopropiona 22.4 94 0.0032 28.4 5.0 32 5-42 31-62 (320)
301 3pnx_A Putative sulfurtransfer 22.3 1.5E+02 0.0053 24.0 5.6 45 6-51 5-50 (160)
302 3ug7_A Arsenical pump-driving 22.3 88 0.003 29.1 4.8 40 5-45 25-65 (349)
303 3gt7_A Sensor protein; structu 22.3 1.1E+02 0.0038 23.8 4.9 42 100-148 41-91 (154)
304 4eg0_A D-alanine--D-alanine li 22.2 89 0.003 28.4 4.8 39 4-43 12-54 (317)
305 3f5d_A Protein YDEA; unknow pr 22.2 73 0.0025 27.1 3.9 39 5-45 3-42 (206)
306 3q9l_A Septum site-determining 22.0 81 0.0028 27.4 4.3 37 7-44 3-41 (260)
307 2glx_A 1,5-anhydro-D-fructose 22.0 4.3E+02 0.015 23.7 10.3 62 336-398 51-120 (332)
308 1u11_A PURE (N5-carboxyaminoim 22.0 3.4E+02 0.012 22.5 12.1 143 262-441 21-173 (182)
309 2bon_A Lipid kinase; DAG kinas 21.9 2.1E+02 0.0071 26.2 7.3 81 261-375 30-118 (332)
310 3h4t_A Glycosyltransferase GTF 21.8 2.4E+02 0.0082 26.4 8.0 35 264-300 3-37 (404)
311 4h15_A Short chain alcohol deh 21.8 1.2E+02 0.004 26.9 5.3 31 7-41 12-42 (261)
312 1p3y_1 MRSD protein; flavoprot 21.7 2.9E+02 0.0099 23.1 7.5 81 338-420 74-187 (194)
313 3lk7_A UDP-N-acetylmuramoylala 21.6 1E+02 0.0034 29.9 5.2 33 4-42 8-40 (451)
314 3aek_B Light-independent proto 21.6 76 0.0026 31.6 4.3 34 101-144 340-373 (525)
315 1e2b_A Enzyme IIB-cellobiose; 21.6 1.4E+02 0.0047 22.3 4.8 36 5-41 3-38 (106)
316 1o4v_A Phosphoribosylaminoimid 21.6 3.5E+02 0.012 22.5 15.4 144 262-441 13-163 (183)
317 3ius_A Uncharacterized conserv 21.6 49 0.0017 29.4 2.8 33 5-43 5-37 (286)
318 3r6d_A NAD-dependent epimerase 21.5 91 0.0031 26.3 4.4 20 23-43 19-39 (221)
319 4hb9_A Similarities with proba 21.4 64 0.0022 30.3 3.7 29 6-40 2-30 (412)
320 2zki_A 199AA long hypothetical 21.4 84 0.0029 26.2 4.1 39 1-42 1-40 (199)
321 4hps_A Pyrrolidone-carboxylate 21.3 50 0.0017 28.8 2.5 27 5-31 23-51 (228)
322 3zq6_A Putative arsenical pump 21.3 82 0.0028 29.0 4.3 38 6-44 14-52 (324)
323 3v8b_A Putative dehydrogenase, 21.3 92 0.0032 27.8 4.6 34 5-42 27-60 (283)
324 1z7e_A Protein aRNA; rossmann 21.2 1.4E+02 0.0048 30.5 6.5 41 101-148 66-107 (660)
325 3a10_A Response regulator; pho 21.2 1.7E+02 0.0058 21.0 5.6 30 117-146 45-81 (116)
326 1e4e_A Vancomycin/teicoplanin 21.2 68 0.0023 29.7 3.8 37 5-42 3-43 (343)
327 2d1y_A Hypothetical protein TT 21.1 88 0.003 27.4 4.3 39 1-43 1-39 (256)
328 1zh8_A Oxidoreductase; TM0312, 21.1 4.2E+02 0.014 24.1 9.3 62 336-398 71-140 (340)
329 3ezy_A Dehydrogenase; structur 21.1 3.3E+02 0.011 24.8 8.6 62 336-398 53-122 (344)
330 2w36_A Endonuclease V; hypoxan 21.1 1.2E+02 0.0039 26.4 4.8 39 101-144 92-137 (225)
331 4eso_A Putative oxidoreductase 21.0 1.1E+02 0.0037 26.8 4.9 33 6-42 8-40 (255)
332 3grp_A 3-oxoacyl-(acyl carrier 20.9 1.2E+02 0.0042 26.6 5.3 34 5-42 26-59 (266)
333 2ag5_A DHRS6, dehydrogenase/re 20.9 1E+02 0.0035 26.7 4.7 38 1-42 1-38 (246)
334 1eyh_A Epsin; superhelix of he 20.9 80 0.0027 25.3 3.5 36 403-438 106-141 (144)
335 1eiw_A Hypothetical protein MT 20.8 1.3E+02 0.0043 22.9 4.5 62 348-418 39-109 (111)
336 2uyy_A N-PAC protein; long-cha 20.8 86 0.0029 28.5 4.3 33 4-42 29-61 (316)
337 2c29_D Dihydroflavonol 4-reduc 20.7 57 0.0019 29.9 3.1 36 1-41 1-36 (337)
338 1xkq_A Short-chain reductase f 20.7 1.2E+02 0.0039 27.0 5.1 38 1-42 1-38 (280)
339 2afh_E Nitrogenase iron protei 20.7 83 0.0028 28.1 4.2 37 6-43 3-39 (289)
340 3evn_A Oxidoreductase, GFO/IDH 20.7 4.7E+02 0.016 23.6 11.4 62 336-398 56-125 (329)
341 3obb_A Probable 3-hydroxyisobu 20.5 84 0.0029 28.6 4.1 31 5-41 3-33 (300)
342 4da9_A Short-chain dehydrogena 20.5 1.2E+02 0.004 27.0 5.1 33 5-41 28-60 (280)
343 1g3q_A MIND ATPase, cell divis 20.4 99 0.0034 26.4 4.5 37 7-44 4-41 (237)
344 2h78_A Hibadh, 3-hydroxyisobut 20.4 81 0.0028 28.4 4.0 32 5-42 3-34 (302)
345 3cfy_A Putative LUXO repressor 20.4 1.7E+02 0.0058 22.1 5.5 32 117-148 48-86 (137)
346 4e21_A 6-phosphogluconate dehy 20.3 61 0.0021 30.4 3.2 33 4-42 21-53 (358)
347 3dhn_A NAD-dependent epimerase 20.2 57 0.0019 27.8 2.8 37 1-43 1-37 (227)
348 2pd4_A Enoyl-[acyl-carrier-pro 20.1 1.2E+02 0.0042 26.7 5.2 40 1-43 1-41 (275)
349 2i87_A D-alanine-D-alanine lig 20.1 59 0.002 30.4 3.1 38 4-42 2-43 (364)
350 2a5l_A Trp repressor binding p 20.1 1.2E+02 0.004 25.2 4.8 37 6-43 6-43 (200)
351 4ehi_A Bifunctional purine bio 20.1 1.4E+02 0.0046 29.5 5.5 41 17-65 32-72 (534)
352 3la6_A Tyrosine-protein kinase 20.1 91 0.0031 28.1 4.2 39 5-44 91-131 (286)
353 3mog_A Probable 3-hydroxybutyr 20.1 51 0.0017 32.5 2.6 37 1-43 1-37 (483)
354 3fgn_A Dethiobiotin synthetase 20.1 1E+02 0.0035 27.2 4.5 36 5-41 25-62 (251)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=7.3e-63 Score=493.73 Aligned_cols=417 Identities=27% Similarity=0.432 Sum_probs=335.3
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCC--cEEEEEcCCcchhhhhhcCCC-CCCceEEeccCCCCCCCCCCCCCCC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNR--YTITFVNTPSNLKKLKSSLPQ-NSSIHLREIPFDGIAHDLPPCTENS 80 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rG--h~Vt~~~~~~~~~~v~~~~~~-~~~~~~~~ip~~~~~~~l~~~~~~~ 80 (473)
.+.||+++|+|++||++|++.||+.|+. +| ++|||++++.+...+...... .++++|..+| ++++.+....
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~-~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ip-----dglp~~~~~~ 85 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIAT-EAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVH-----DGLPKGYVSS 85 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHH-HCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECC-----CCCCTTCCCC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHh-CCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecC-----CCCCCCcccc
Confidence 3679999999999999999999999999 99 999999998777766543211 1579999887 4677655433
Q ss_pred CCCCCCCchHHHHHHh-hhhHHHHHHHhhhhhccCCCCCeEEEeCCCcchHHHHHHHhCCcEEEEccccHHHHHHHHhhh
Q 043168 81 DSLPFHLFPNFFESTL-SFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFGFACFYSLW 159 (473)
Q Consensus 81 ~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 159 (473)
.+ +...+..+..... .+.+.+.+++++. ++++|+||+|.+++|+..+|+++|||++.+++++++.+..+.+.+
T Consensus 86 ~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~ 159 (454)
T 3hbf_A 86 GN-PREPIFLFIKAMQENFKHVIDEAVAET-----GKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTD 159 (454)
T ss_dssp SC-TTHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHH
T ss_pred CC-hHHHHHHHHHHHHHHHHHHHHHHHhhc-----CCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhH
Confidence 32 2222233333332 2333344444332 127899999999999999999999999999999999888776654
Q ss_pred hcCCCCC------CCCc-ccCCCCCCcccchhhhhhhhhccCCCChHHHHHHHHhhhcccCceEEecchhhhccc-----
Q 043168 160 LNLPHRD------SDEF-LLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVEELDKI----- 227 (473)
Q Consensus 160 ~~~p~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~----- 227 (473)
....... .... .+|+++. +..++++..+.. ...+.+..++.+..+....++.+++||+++||++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~iPg~p~---~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~ 235 (454)
T 3hbf_A 160 LIREKTGSKEVHDVKSIDVLPGFPE---LKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENEL 235 (454)
T ss_dssp HHHHTCCHHHHTTSSCBCCSTTSCC---BCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHH
T ss_pred HHHhhcCCCccccccccccCCCCCC---cChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHH
Confidence 3221110 1222 3788876 788888877654 4445677778888888889999999999999873
Q ss_pred ---------cCccccCCCCCCCCCCCCCCCchhhhhhhccCCCCceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEE
Q 043168 228 ---------VGPLLLSTGSRAGAGKEYGISTESCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVV 298 (473)
Q Consensus 228 ---------vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~ 298 (473)
|||+...... +....+.++.+||+.++++++|||||||....+.+++.+++.+|+..+++|||++
T Consensus 236 ~~~~~~v~~vGPl~~~~~~------~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~ 309 (454)
T 3hbf_A 236 NSKFKLLLNVGPFNLTTPQ------RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSF 309 (454)
T ss_dssp HTTSSCEEECCCHHHHSCC------SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEEC
T ss_pred HhcCCCEEEECCccccccc------ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEe
Confidence 8998865311 1112356799999998888999999999998888999999999999999999999
Q ss_pred cCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChHHhhcccccceeeeccChhhHHHHHhcCCCEEecccccc
Q 043168 299 KPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLAAE 378 (473)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~D 378 (473)
+... . +.+|++|.++. ++|+.+.+|+||.++|+|+++++|||||||||++|++++|||+|++|+..|
T Consensus 310 ~~~~-------~---~~lp~~~~~~~---~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~D 376 (454)
T 3hbf_A 310 RGDP-------K---EKLPKGFLERT---KTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGD 376 (454)
T ss_dssp CSCH-------H---HHSCTTHHHHT---TTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTT
T ss_pred CCcc-------h---hcCCHhHHhhc---CCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCccccc
Confidence 8651 1 23788887766 578888899999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHcceEEEecccCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHH
Q 043168 379 QFYNSKLLEEVIGVCVEVARGMNCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMIIKNAVRNEEKFKGSSVKAMEQF 458 (473)
Q Consensus 379 Q~~~a~~v~~~lG~G~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~~~~~~~~g~~~~~~~~~ 458 (473)
|+.||+++++.||+|+.+.. ..++.++|.++|+++|+++ ++++||+||+++++.+++++ .+|||+.+++++|
T Consensus 377 Q~~Na~~v~~~~g~Gv~l~~---~~~~~~~l~~av~~ll~~~-~~~~~r~~a~~l~~~~~~a~----~~gGsS~~~l~~~ 448 (454)
T 3hbf_A 377 QGLNTILTESVLEIGVGVDN---GVLTKESIKKALELTMSSE-KGGIMRQKIVKLKESAFKAV----EQNGTSAMDFTTL 448 (454)
T ss_dssp HHHHHHHHHTTSCSEEECGG---GSCCHHHHHHHHHHHHSSH-HHHHHHHHHHHHHHHHHHHT----STTSHHHHHHHHH
T ss_pred HHHHHHHHHHhhCeeEEecC---CCCCHHHHHHHHHHHHCCC-hHHHHHHHHHHHHHHHHHhh----ccCCCHHHHHHHH
Confidence 99999999986799999987 7899999999999999885 67899999999999999999 9999999999999
Q ss_pred HHHHH
Q 043168 459 LDAAL 463 (473)
Q Consensus 459 ~~~~~ 463 (473)
++++.
T Consensus 449 v~~i~ 453 (454)
T 3hbf_A 449 IQIVT 453 (454)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 99864
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.1e-56 Score=456.33 Aligned_cols=435 Identities=29% Similarity=0.480 Sum_probs=313.2
Q ss_pred CCC-CCceEEEEcCCCccCHHHHHHHHHHHHhCC-CcEEEEEcCCc--chhhhhhcCCC-CCCceEEeccCCCCCCCCCC
Q 043168 1 MAQ-RKENIVMFPLMAQGHIIPFLALALHLENTN-RYTITFVNTPS--NLKKLKSSLPQ-NSSIHLREIPFDGIAHDLPP 75 (473)
Q Consensus 1 m~~-~~~~Il~~~~~~~GHv~P~l~LA~~L~~~r-Gh~Vt~~~~~~--~~~~v~~~~~~-~~~~~~~~ip~~~~~~~l~~ 75 (473)
|+. +++||+++|+|++||++|+++||++|++ | ||+|||++++. +...+...... ..+++|+.+|.. .++.
T Consensus 1 M~~~~~~~vl~~p~p~~GHv~P~l~La~~L~~-r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~----~~~~ 75 (480)
T 2vch_A 1 MEESKTPHVAIIPSPGMGHLIPLVEFAKRLVH-LHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPV----DLTD 75 (480)
T ss_dssp -----CCEEEEECCSCHHHHHHHHHHHHHHHH-HHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCC----CCTT
T ss_pred CCCCCCcEEEEecCcchhHHHHHHHHHHHHHh-CCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCC----CCCC
Confidence 554 3479999999999999999999999999 9 99999999887 34444431110 157899988743 1111
Q ss_pred CCCCCCCCCCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCC-eEEEeCCCcchHHHHHHHhCCcEEEEccccHHHHHH
Q 043168 76 CTENSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKP-VCIIADMFFAWSAEIAQEYGIFNALFVGGGSFGFAC 154 (473)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-DlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~ 154 (473)
. .. .......+......+.+.+.+++++... ..++ |+||+|.++.|+..+|+++|||++.+++++++....
T Consensus 76 -~---~~-~~~~~~~~~~~~~~~~~~l~~ll~~~~~---~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~ 147 (480)
T 2vch_A 76 -L---SS-STRIESRISLTVTRSNPELRKVFDSFVE---GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSF 147 (480)
T ss_dssp -S---CT-TCCHHHHHHHHHHTTHHHHHHHHHHHHH---TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHH
T ss_pred -C---CC-chhHHHHHHHHHHhhhHHHHHHHHHhcc---CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHH
Confidence 1 00 1112233444455666778888877421 1167 999999999999999999999999999998876655
Q ss_pred HHhhhh---cCCCC--C-CCCcccCCCCCCcccchhhhhhhhhccCCCChHHHHHHHHhhhcccCceEEecchhhhccc-
Q 043168 155 FYSLWL---NLPHR--D-SDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVEELDKI- 227 (473)
Q Consensus 155 ~~~~~~---~~p~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~- 227 (473)
+.+.+. ..+.. . .....+|+++. +....++..+... .......+......+.....+++|++.+++..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~Pg~~p---~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~ 222 (480)
T 2vch_A 148 FLHLPKLDETVSCEFRELTEPLMLPGCVP---VAGKDFLDPAQDR--KDDAYKWLLHNTKRYKEAEGILVNTFFELEPNA 222 (480)
T ss_dssp HHHHHHHHHHCCSCGGGCSSCBCCTTCCC---BCGGGSCGGGSCT--TSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHH
T ss_pred HHHHHHHHhcCCCcccccCCcccCCCCCC---CChHHCchhhhcC--CchHHHHHHHHHHhcccCCEEEEcCHHHHhHHH
Confidence 443221 11100 0 11123455543 4444444433221 12233344444445666788889999888752
Q ss_pred ----------------cCccccCCCCCCCCCCCCCCCchhhhhhhccCCCCceEEEEecCcccCCHHHHHHHHHHHHhCC
Q 043168 228 ----------------VGPLLLSTGSRAGAGKEYGISTESCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACG 291 (473)
Q Consensus 228 ----------------vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~ 291 (473)
|||++...... .....+.++.+||++++++++|||||||....+.+++.+++++|+..+
T Consensus 223 ~~~l~~~~~~~~~v~~vGpl~~~~~~~-----~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~ 297 (480)
T 2vch_A 223 IKALQEPGLDKPPVYPVGPLVNIGKQE-----AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSE 297 (480)
T ss_dssp HHHHHSCCTTCCCEEECCCCCCCSCSC-----C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHhcccCCCcEEEEeccccccccc-----cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcC
Confidence 77776543100 002345689999999877899999999999888899999999999999
Q ss_pred CcEEEEEcCCCCCC----C----ccchhcccCCchhHHHhhccCCCCeEEecccChHHhhcccccceeeeccChhhHHHH
Q 043168 292 KNFIWVVKPPLGFD----L----NSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEA 363 (473)
Q Consensus 292 ~~~i~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HgG~gs~~ea 363 (473)
++|||+++...... . +.+.. +.+|+++.++++ ..++++.+|+||.+||+|++|++|||||||||++||
T Consensus 298 ~~~lw~~~~~~~~~~~~~~~~~~~~~~~--~~lp~~~~~~~~--~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Ea 373 (480)
T 2vch_A 298 QRFLWVIRSPSGIANSSYFDSHSQTDPL--TFLPPGFLERTK--KRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLES 373 (480)
T ss_dssp CEEEEEECCCCSSTTTTTTCC--CSCGG--GGSCTTHHHHTT--TTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHH
T ss_pred CcEEEEECCccccccccccccccccchh--hhcCHHHHHHhC--CCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHH
Confidence 99999998652100 0 00111 237888888876 677888679999999999999999999999999999
Q ss_pred HhcCCCEEecccccchhhhHHHHHHHHcceEEEecccCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhhhh
Q 043168 364 LSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMIIKNAVRN 443 (473)
Q Consensus 364 l~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~~~ 443 (473)
+++|||||++|+..||+.||+++++.+|+|+.+...++..+++++|+++|+++|+++ ++++||+||+++++.+++++
T Consensus 374 l~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~-~~~~~r~~a~~l~~~~~~a~-- 450 (480)
T 2vch_A 374 VVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGE-EGKGVRNKMKELKEAACRVL-- 450 (480)
T ss_dssp HHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTST-HHHHHHHHHHHHHHHHHHHT--
T ss_pred HHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhcCc-chHHHHHHHHHHHHHHHHHH--
Confidence 999999999999999999999985455999999762222799999999999999855 45589999999999999988
Q ss_pred hhccCCChHHHHHHHHHHHHHhhh
Q 043168 444 EEKFKGSSVKAMEQFLDAALMMKK 467 (473)
Q Consensus 444 ~~~~~g~~~~~~~~~~~~~~~~~~ 467 (473)
.+||++..++++|+++++.+.+
T Consensus 451 --~~gGss~~~~~~~v~~~~~~~~ 472 (480)
T 2vch_A 451 --KDDGTSTKALSLVALKWKAHKK 472 (480)
T ss_dssp --STTSHHHHHHHHHHHHHHHHHH
T ss_pred --hcCCCHHHHHHHHHHHHHHhHH
Confidence 8999999999999999876433
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=3.9e-57 Score=461.14 Aligned_cols=432 Identities=27% Similarity=0.510 Sum_probs=316.7
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhhcCCC-----CCCceEEeccCCCCCCCCCCCCC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQ-----NSSIHLREIPFDGIAHDLPPCTE 78 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~-----~~~~~~~~ip~~~~~~~l~~~~~ 78 (473)
.++||+++|+|++||++|++.||++|++ |||+|||++++.+...+.+.... .++++|..+| ++++....
T Consensus 7 ~~~~vl~~p~p~~GHi~P~l~La~~L~~-rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~-----~~lp~~~~ 80 (482)
T 2pq6_A 7 RKPHVVMIPYPVQGHINPLFKLAKLLHL-RGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP-----DGLTPMEG 80 (482)
T ss_dssp -CCEEEEECCSSHHHHHHHHHHHHHHHH-TTCEEEEEEEHHHHHHHC------------CEEEEEEC-----CCCC----
T ss_pred CCCEEEEecCccchhHHHHHHHHHHHHh-CCCeEEEEeCCchhhhhccccccccccCCCceEEEECC-----CCCCCccc
Confidence 3569999999999999999999999999 99999999999887766543110 0378998887 24443110
Q ss_pred CCCCCCCCCchHHHHHH-hhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcchHHHHHHHhCCcEEEEccccHHHHHHHHh
Q 043168 79 NSDSLPFHLFPNFFEST-LSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFGFACFYS 157 (473)
Q Consensus 79 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~ 157 (473)
.. . ....+..++..+ ..+.+.++++++.......+.+||+||+|.++.|+..+|+++|||++.+++++++....+.+
T Consensus 81 ~~-~-~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~ 158 (482)
T 2pq6_A 81 DG-D-VSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMH 158 (482)
T ss_dssp -------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTT
T ss_pred cc-C-cchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHH
Confidence 00 1 112234455544 45567778888765311001279999999999999999999999999999998876655432
Q ss_pred h-----hhcCCCCCC--------CC--cccCCCCCCcccchhhhhhhhhccCCCChHHHHHHHHhhhcccCceEEecchh
Q 043168 158 L-----WLNLPHRDS--------DE--FLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVE 222 (473)
Q Consensus 158 ~-----~~~~p~~~~--------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 222 (473)
. ..+.|.... +. ..+|+++. +....++.++......+.+..++....+....++.+++|+++
T Consensus 159 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~ 235 (482)
T 2pq6_A 159 FRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKN---FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFN 235 (482)
T ss_dssp HHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS---CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCG
T ss_pred HHHHHhcCCCCCccccccccccccCccccCCCCCC---CchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChH
Confidence 2 234443210 11 11233332 344455544443333455556666666677788999999999
Q ss_pred hhccc--------------cCccccC-CCCC--C---CCCCCCCCCchhhhhhhccCCCCceEEEEecCcccCCHHHHHH
Q 043168 223 ELDKI--------------VGPLLLS-TGSR--A---GAGKEYGISTESCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQ 282 (473)
Q Consensus 223 ~l~~~--------------vGp~~~~-~~~~--~---~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~ 282 (473)
+||++ |||+... .... . ......++.+.++.+||++++++++|||||||......+++.+
T Consensus 236 ~le~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~ 315 (482)
T 2pq6_A 236 ELESDVINALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLE 315 (482)
T ss_dssp GGGHHHHHHHHTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHH
T ss_pred HHhHHHHHHHHHhCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHH
Confidence 99862 8998763 2110 0 0000111234568999999877899999999998878888999
Q ss_pred HHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChHHhhcccccceeeeccChhhHHH
Q 043168 283 LAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLE 362 (473)
Q Consensus 283 ~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HgG~gs~~e 362 (473)
++.+|+..+++|||+++... ...+. ..+|+++.++. +.|+.+.+|+||.++|+|+++++|||||||||++|
T Consensus 316 ~~~~l~~~~~~~l~~~~~~~---~~~~~---~~l~~~~~~~~---~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~E 386 (482)
T 2pq6_A 316 FAWGLANCKKSFLWIIRPDL---VIGGS---VIFSSEFTNEI---ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTE 386 (482)
T ss_dssp HHHHHHHTTCEEEEECCGGG---STTTG---GGSCHHHHHHH---TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHH
T ss_pred HHHHHHhcCCcEEEEEcCCc---ccccc---ccCcHhHHHhc---CCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHH
Confidence 99999999999999987531 00000 12677887765 67899999999999999999999999999999999
Q ss_pred HHhcCCCEEecccccchhhhHHHHHHHHcceEEEecccCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhhh
Q 043168 363 ALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMIIKNAVR 442 (473)
Q Consensus 363 al~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~~ 442 (473)
|+++|||+|++|+..||+.||+++++.+|+|+.+.. .+++++|.++|+++|+|+ .+++||+||+++++.+++|+
T Consensus 387 al~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~----~~~~~~l~~~i~~ll~~~-~~~~~r~~a~~l~~~~~~a~- 460 (482)
T 2pq6_A 387 SICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDT----NVKREELAKLINEVIAGD-KGKKMKQKAMELKKKAEENT- 460 (482)
T ss_dssp HHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCS----SCCHHHHHHHHHHHHTSH-HHHHHHHHHHHHHHHHHHHT-
T ss_pred HHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECC----CCCHHHHHHHHHHHHcCC-cHHHHHHHHHHHHHHHHHHH-
Confidence 999999999999999999999999754499999873 699999999999999988 46789999999999999998
Q ss_pred hhhccCCChHHHHHHHHHHHHH
Q 043168 443 NEEKFKGSSVKAMEQFLDAALM 464 (473)
Q Consensus 443 ~~~~~~g~~~~~~~~~~~~~~~ 464 (473)
.+|||+.+++++|++++..
T Consensus 461 ---~~gGss~~~l~~~v~~~~~ 479 (482)
T 2pq6_A 461 ---RPGGCSYMNLNKVIKDVLL 479 (482)
T ss_dssp ---STTCHHHHHHHHHHHHTTC
T ss_pred ---hcCCcHHHHHHHHHHHHHh
Confidence 8999999999999998753
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=9.2e-56 Score=446.73 Aligned_cols=420 Identities=25% Similarity=0.423 Sum_probs=308.4
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCc--EEEEEcCCcchhhhhhcCCC--CCCceEEeccCCCCCCCCCCCCCC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRY--TITFVNTPSNLKKLKSSLPQ--NSSIHLREIPFDGIAHDLPPCTEN 79 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh--~Vt~~~~~~~~~~v~~~~~~--~~~~~~~~ip~~~~~~~l~~~~~~ 79 (473)
.++||+++|+|++||++|+++||++|++ ||| .|||++++.+...+.....+ ..+++|..++ ++++.....
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~-rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~-----~glp~~~~~ 79 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAA-AAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDIS-----DGVPEGYVF 79 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHH-HCTTSEEEEEECHHHHHHHC-------CTTEEEEECC-----CCCCTTCCC
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHh-CCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCC-----CCCCCcccc
Confidence 4679999999999999999999999999 865 56889887655544432211 0478888876 345544321
Q ss_pred CCCCCCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcchHHHHHHHhCCcEEEEccccHHHHHHHHhhh
Q 043168 80 SDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFGFACFYSLW 159 (473)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 159 (473)
...+...+..+.... .+.+++++++..... +.+||+||+|.++.|+..+|+++|||++.+++++++.+..+.+.+
T Consensus 80 -~~~~~~~~~~~~~~~---~~~~~~~l~~l~~~~-~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 154 (456)
T 2c1x_A 80 -AGRPQEDIELFTRAA---PESFRQGMVMAVAET-GRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYID 154 (456)
T ss_dssp -CCCTTHHHHHHHHHH---HHHHHHHHHHHHHHH-TCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHH
T ss_pred -cCChHHHHHHHHHHh---HHHHHHHHHHHHhcc-CCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhH
Confidence 111211122222222 233444443321110 118999999999999999999999999999999877665443221
Q ss_pred h-----cCCC--CC-CCC-cccCCCCCCcccchhhhhhhhhccCCCChHHHHHHHHhhhcccCceEEecchhhhccc---
Q 043168 160 L-----NLPH--RD-SDE-FLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVEELDKI--- 227 (473)
Q Consensus 160 ~-----~~p~--~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~--- 227 (473)
. ..+. .. ... ..+|+++. +....++..+......+.+..++.+..+....++.+++|++++||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pg~~~---~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~ 231 (456)
T 2c1x_A 155 EIREKIGVSGIQGREDELLNFIPGMSK---VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTN 231 (456)
T ss_dssp HHHHHHCSSCCTTCTTCBCTTSTTCTT---CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHH
T ss_pred HHHhccCCcccccccccccccCCCCCc---ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHH
Confidence 1 1110 00 111 23556654 44455554332222233455556555566678899999999999873
Q ss_pred -----------cCccccCCCCCCCCCCCCCCCchhhhhhhccCCCCceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEE
Q 043168 228 -----------VGPLLLSTGSRAGAGKEYGISTESCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIW 296 (473)
Q Consensus 228 -----------vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 296 (473)
|||+...... .....+.++.+|++..+++++|||||||......+++.+++++|+..+++|||
T Consensus 232 ~~~~~~~~~~~vGpl~~~~~~------~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw 305 (456)
T 2c1x_A 232 DLKSKLKTYLNIGPFNLITPP------PVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIW 305 (456)
T ss_dssp HHHHHSSCEEECCCHHHHC---------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHhcCCCEEEecCcccCccc------ccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEE
Confidence 8888764310 00112346889999887889999999999988888999999999999999999
Q ss_pred EEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChHHhhcccccceeeeccChhhHHHHHhcCCCEEecccc
Q 043168 297 VVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLA 376 (473)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~ 376 (473)
+++... . +.+|+++.++. +.|+.+.+|+||.++|+|+++++|||||||||++||+++|||+|++|+.
T Consensus 306 ~~~~~~-------~---~~l~~~~~~~~---~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~ 372 (456)
T 2c1x_A 306 SLRDKA-------R---VHLPEGFLEKT---RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFF 372 (456)
T ss_dssp ECCGGG-------G---GGSCTTHHHHH---TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred EECCcc-------h---hhCCHHHHhhc---CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCCh
Confidence 997541 1 23777777665 5788889999999999999999999999999999999999999999999
Q ss_pred cchhhhHHHHHHHHcceEEEecccCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHH
Q 043168 377 AEQFYNSKLLEEVIGVCVEVARGMNCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMIIKNAVRNEEKFKGSSVKAME 456 (473)
Q Consensus 377 ~DQ~~~a~~v~~~lG~G~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~~~~~~~~g~~~~~~~ 456 (473)
.||+.||+++++.||+|+.+.. ..++.++|.++|+++|+|+ ++++||+||+++++.+++++ ++|||+.++++
T Consensus 373 ~dQ~~Na~~l~~~~g~g~~l~~---~~~~~~~l~~~i~~ll~~~-~~~~~r~~a~~l~~~~~~a~----~~gGsS~~~l~ 444 (456)
T 2c1x_A 373 GDQRLNGRMVEDVLEIGVRIEG---GVFTKSGLMSCFDQILSQE-KGKKLRENLRALRETADRAV----GPKGSSTENFI 444 (456)
T ss_dssp TTHHHHHHHHHHTSCCEEECGG---GSCCHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHHHT----STTCHHHHHHH
T ss_pred hhHHHHHHHHHHHhCeEEEecC---CCcCHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHHHHhh----hcCCcHHHHHH
Confidence 9999999999988899999987 7899999999999999987 47789999999999999999 99999999999
Q ss_pred HHHHHHHH
Q 043168 457 QFLDAALM 464 (473)
Q Consensus 457 ~~~~~~~~ 464 (473)
+|++++..
T Consensus 445 ~~v~~~~~ 452 (456)
T 2c1x_A 445 TLVDLVSK 452 (456)
T ss_dssp HHHHHHTS
T ss_pred HHHHHHHh
Confidence 99998754
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.2e-54 Score=439.83 Aligned_cols=416 Identities=29% Similarity=0.459 Sum_probs=305.2
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCC--CcEEEEEcCCcch-----hhhhhcCCCCCCceEEeccCCCCCCCCCCCC
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTN--RYTITFVNTPSNL-----KKLKSSLPQNSSIHLREIPFDGIAHDLPPCT 77 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~r--Gh~Vt~~~~~~~~-----~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~ 77 (473)
+.||+++|+|++||++|+++||++|++ + ||+|||++++.+. ..+........+++|..+|.. .++. .
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~-r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~----~~~~-~ 82 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTN-HDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEV----EPPP-Q 82 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHH-TCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCC----CCCC-G
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHh-cCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCC----CCCc-c
Confidence 469999999999999999999999999 8 9999999988753 233221000157899988843 1221 1
Q ss_pred CCCCCCCCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcchHHHHHHHhCCcEEEEccccHHHHHHHHh
Q 043168 78 ENSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFGFACFYS 157 (473)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~ 157 (473)
..... .. .. +...+....+.+++++++.. +.+||+||+|.++.|+..+|+++|||++.+++++++.+..+.+
T Consensus 83 ~~~~~--~~-~~-~~~~~~~~~~~~~~ll~~~~----~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~ 154 (463)
T 2acv_A 83 ELLKS--PE-FY-ILTFLESLIPHVKATIKTIL----SNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLS 154 (463)
T ss_dssp GGGGS--HH-HH-HHHHHHHTHHHHHHHHHHHC----CTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHH
T ss_pred cccCC--cc-HH-HHHHHHhhhHHHHHHHHhcc----CCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHH
Confidence 00000 00 11 44455566678888888730 1189999999999999999999999999999998887766554
Q ss_pred hhhcC---CCCCCC----CcccCCC-CCCcccchhhhhhhhhccCCCChHHHHHHHHhhhcccCceEEecchhhhccc--
Q 043168 158 LWLNL---PHRDSD----EFLLPDF-PEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVEELDKI-- 227 (473)
Q Consensus 158 ~~~~~---p~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~-- 227 (473)
.+... +....+ ...+|++ +. +....++..+... .. ....+.........++.+++|++++|++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~---~~~~~l~~~~~~~--~~-~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~ 228 (463)
T 2acv_A 155 LKNRQIEEVFDDSDRDHQLLNIPGISNQ---VPSNVLPDACFNK--DG-GYIAYYKLAERFRDTKGIIVNTFSDLEQSSI 228 (463)
T ss_dssp GGGSCTTCCCCCSSGGGCEECCTTCSSC---EEGGGSCHHHHCT--TT-HHHHHHHHHHHHTTSSEEEESCCHHHHHHHH
T ss_pred HHhhcccCCCCCccccCceeECCCCCCC---CChHHCchhhcCC--ch-HHHHHHHHHHhcccCCEEEECCHHHHhHHHH
Confidence 43321 100011 2345565 43 4444444443322 12 33344444455667788899999998752
Q ss_pred ---------------cCccccCCCCCCCCCCCCCCCchhhhhhhccCCCCceEEEEecCcc-cCCHHHHHHHHHHHHhCC
Q 043168 228 ---------------VGPLLLSTGSRAGAGKEYGISTESCKNWLDTKPCNSVIYVSFGSQN-TIAASQMMQLAMALEACG 291 (473)
Q Consensus 228 ---------------vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~-~~~~~~~~~~~~al~~~~ 291 (473)
|||+........ . ...+..+.++.+||+.++++++|||||||.. ..+.+++.+++++|+..+
T Consensus 229 ~~l~~~~~p~~~v~~vGpl~~~~~~~~-~-~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~ 306 (463)
T 2acv_A 229 DALYDHDEKIPPIYAVGPLLDLKGQPN-P-KLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSG 306 (463)
T ss_dssp HHHHHHCTTSCCEEECCCCCCSSCCCB-T-TBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHhccccCCcEEEeCCCcccccccc-c-ccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCC
Confidence 777765431000 0 0001234678999999878899999999999 778888999999999999
Q ss_pred CcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChHHhhcccccceeeeccChhhHHHHHhcCCCEE
Q 043168 292 KNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHGVPII 371 (473)
Q Consensus 292 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i 371 (473)
++|||+++.+. +.+|+++.++... +.++.+.+|+||.++|+|+++++|||||||||++||+++|||+|
T Consensus 307 ~~~l~~~~~~~-----------~~l~~~~~~~~~~-~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i 374 (463)
T 2acv_A 307 VRFLWSNSAEK-----------KVFPEGFLEWMEL-EGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPIL 374 (463)
T ss_dssp CEEEEECCCCG-----------GGSCTTHHHHHHH-HCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEE
T ss_pred CcEEEEECCCc-----------ccCChhHHHhhcc-CCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCee
Confidence 99999998531 1267777665410 24677779999999999999999999999999999999999999
Q ss_pred ecccccchhhhHHHH-HHHHcceEEE-ecccCC--ccCHHHHHHHHHHHHc-CChhhHHHHHHHHHHHHHHHHhhhhhhc
Q 043168 372 GWPLAAEQFYNSKLL-EEVIGVCVEV-ARGMNC--EVSKENLSAKFELVMN-ETEKGMDLRKKASEVEMIIKNAVRNEEK 446 (473)
Q Consensus 372 ~~P~~~DQ~~~a~~v-~~~lG~G~~l-~~~~~~--~~~~~~l~~ai~~~l~-~~~~~~~~~~~a~~~~~~~~~a~~~~~~ 446 (473)
++|+..||+.||+++ ++. |+|+.+ ...+.. .++.++|.++|+++|+ ++ +||+||+++++.+++++ .
T Consensus 375 ~~P~~~dQ~~Na~~lv~~~-g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~----~~r~~a~~l~~~~~~a~----~ 445 (463)
T 2acv_A 375 TWPIYAEQQLNAFRLVKEW-GVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDS----IVHKKVQEMKEMSRNAV----V 445 (463)
T ss_dssp ECCCSTTHHHHHHHHHHTS-CCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTC----THHHHHHHHHHHHHHHT----S
T ss_pred eccchhhhHHHHHHHHHHc-CeEEEEecccCCCCccccHHHHHHHHHHHHhccH----HHHHHHHHHHHHHHHHH----h
Confidence 999999999999995 655 999999 311114 6899999999999997 46 79999999999999998 8
Q ss_pred cCCChHHHHHHHHHHHH
Q 043168 447 FKGSSVKAMEQFLDAAL 463 (473)
Q Consensus 447 ~~g~~~~~~~~~~~~~~ 463 (473)
+|||+.+++++|++++.
T Consensus 446 ~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 446 DGGSSLISVGKLIDDIT 462 (463)
T ss_dssp TTSHHHHHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHhc
Confidence 99999999999999874
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.9e-43 Score=353.23 Aligned_cols=386 Identities=18% Similarity=0.230 Sum_probs=260.1
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhhcCCCCCCceEEeccCCCCCCCCCCCCCCCCC
Q 043168 3 QRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDS 82 (473)
Q Consensus 3 ~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~~~~~~ 82 (473)
|.++||+|+++++.||++|+++||++|++ +||+|+|++++.+.+.+... |++|++++. .++........
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~-~Gh~V~~~~~~~~~~~~~~~-----g~~~~~~~~-----~~~~~~~~~~~ 78 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVA-RGHRVSYAITDEFAAQVKAA-----GATPVVYDS-----ILPKESNPEES 78 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHHH-----TCEEEECCC-----CSCCTTCTTCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHH-CCCeEEEEeCHHHHHHHHhC-----CCEEEecCc-----cccccccchhh
Confidence 34579999999999999999999999999 99999999999998888884 558887762 22221111000
Q ss_pred CCCC---CchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcchHHHHHHHhCCcEEEEccccHHHHHHHHhhh
Q 043168 83 LPFH---LFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFGFACFYSLW 159 (473)
Q Consensus 83 ~~~~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 159 (473)
.+.. .+..+........+.+.++++++ +||+||+|.+..++..+|+.+|||++.+++.+.........+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~ 151 (424)
T 2iya_A 79 WPEDQESAMGLFLDEAVRVLPQLEDAYADD-------RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVP 151 (424)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHTTTS-------CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSG
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhcc-------CCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccc
Confidence 1111 11122223334556677777777 9999999998888999999999999999766542111100000
Q ss_pred hcCC-CCC-CCCcccC-CC--CCCccc--c-----hhhhhhhhhccCCCChHHHHHHHHhhhcccCceEEecchhhhccc
Q 043168 160 LNLP-HRD-SDEFLLP-DF--PEASRI--H-----VTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVEELDKI 227 (473)
Q Consensus 160 ~~~p-~~~-~~~~~~~-~~--~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 227 (473)
...+ ... ......| .. ...... . ...+..++...+..... .......+.+++++++.++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-------~~~~~~~~~~l~~~~~~l~~~ 224 (424)
T 2iya_A 152 AVQDPTADRGEEAAAPAGTGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPA-------TEFLIAPNRCIVALPRTFQIK 224 (424)
T ss_dssp GGSCCCC---------------------HHHHHHHHHHHHHHHHHTTCCSCH-------HHHHHCCSSEEESSCTTTSTT
T ss_pred cccccccccccccccccccccchhhhccchhHHHHHHHHHHHHHHcCCCCCH-------HHhccCCCcEEEEcchhhCCC
Confidence 0000 000 0000000 00 000000 0 00111111111111000 011124567888888888764
Q ss_pred ----------cCccccCCCCCCCCCCCCCCCchhhhhhhccCCCCceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEE
Q 043168 228 ----------VGPLLLSTGSRAGAGKEYGISTESCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWV 297 (473)
Q Consensus 228 ----------vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 297 (473)
|||++... ....+|++..+++++|||++||......+.+..++++++..+++++|+
T Consensus 225 ~~~~~~~~~~vGp~~~~~--------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~ 290 (424)
T 2iya_A 225 GDTVGDNYTFVGPTYGDR--------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLS 290 (424)
T ss_dssp GGGCCTTEEECCCCCCCC--------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEE
T ss_pred ccCCCCCEEEeCCCCCCc--------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEE
Confidence 55544321 123468776556789999999998656788899999998888999998
Q ss_pred EcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChHHhhcccccceeeeccChhhHHHHHhcCCCEEeccccc
Q 043168 298 VKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLAA 377 (473)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~ 377 (473)
++... ..+.+ ...+.|+.+.+|+||.++|++++ +||||||+||++||+++|||+|++|...
T Consensus 291 ~g~~~-------------~~~~~----~~~~~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~ 351 (424)
T 2iya_A 291 VGRFV-------------DPADL----GEVPPNVEVHQWVPQLDILTKAS--AFITHAGMGSTMEALSNAVPMVAVPQIA 351 (424)
T ss_dssp CCTTS-------------CGGGG----CSCCTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEECCCSH
T ss_pred ECCcC-------------ChHHh----ccCCCCeEEecCCCHHHHHhhCC--EEEECCchhHHHHHHHcCCCEEEecCcc
Confidence 87642 11111 01167899999999999999976 7999999999999999999999999999
Q ss_pred chhhhHHHHHHHHcceEEEecccCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHH
Q 043168 378 EQFYNSKLLEEVIGVCVEVARGMNCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMIIKNAVRNEEKFKGSSVKAMEQ 457 (473)
Q Consensus 378 DQ~~~a~~v~~~lG~G~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~~~~~~~~g~~~~~~~~ 457 (473)
||+.||+++++. |+|+.+.. ..+++++|.++|+++|+|+ +|+++++++++.++ ..+| ..++++.
T Consensus 352 dQ~~na~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~-------~~~~-~~~~~~~ 415 (424)
T 2iya_A 352 EQTMNAERIVEL-GLGRHIPR---DQVTAEKLREAVLAVASDP----GVAERLAAVRQEIR-------EAGG-ARAAADI 415 (424)
T ss_dssp HHHHHHHHHHHT-TSEEECCG---GGCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH-------TSCH-HHHHHHH
T ss_pred chHHHHHHHHHC-CCEEEcCc---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH-------hcCc-HHHHHHH
Confidence 999999999976 99999987 6789999999999999999 89999999999986 3344 5555555
Q ss_pred HHHHH
Q 043168 458 FLDAA 462 (473)
Q Consensus 458 ~~~~~ 462 (473)
+.+.+
T Consensus 416 i~~~~ 420 (424)
T 2iya_A 416 LEGIL 420 (424)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=3.5e-43 Score=350.72 Aligned_cols=352 Identities=14% Similarity=0.100 Sum_probs=225.7
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhhcCCCCCCceEEeccCCCCCCC--CCCCCCCCC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHD--LPPCTENSD 81 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~ip~~~~~~~--l~~~~~~~~ 81 (473)
+.+||||+++|+.||++|+++||++|++ |||+|+|++++.+..... .++.+..+........ .+.......
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~-rGh~Vt~~t~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRA-LGHEVRYATGGDIRAVAE------AGLCAVDVSPGVNYAKLFVPDDTDVTD 93 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHH-TTCEEEEEECSSTHHHHT------TTCEEEESSTTCCSHHHHSCCC-----
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHH-CCCEEEEEeCcchhhHHh------cCCeeEecCCchhHhhhcccccccccc
Confidence 3569999999999999999999999999 999999999988776554 3446665531100000 000000000
Q ss_pred CCC--CCCch----HHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcchHHHHHHHhCCcEEEEccccHHHHHHH
Q 043168 82 SLP--FHLFP----NFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFGFACF 155 (473)
Q Consensus 82 ~~~--~~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~ 155 (473)
... ..... .+..........+.++++++ +||+||+|.+.+++..+|+.+|||++.+..++.......
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~ 166 (400)
T 4amg_A 94 PMHSEGLGEGFFAEMFARVSAVAVDGALRTARSW-------RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGL 166 (400)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHH
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCCEEEECcchHHHHHHHHHcCCCceeecccccccccch
Confidence 000 00011 11122234455677788888 999999999999999999999999998755433221111
Q ss_pred HhhhhcCCCCCCCCcccCCCCCCcccchhhhhhhhhccCCCChHHHHHHHHhhhc-ccCceEEecchhhhccccCccccC
Q 043168 156 YSLWLNLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQW-MNADGILFNTVEELDKIVGPLLLS 234 (473)
Q Consensus 156 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~l~~~vGp~~~~ 234 (473)
... ..+.+. ..+.+..... ......+......+... .|....
T Consensus 167 ~~~-----------------------~~~~l~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 209 (400)
T 4amg_A 167 GAL-----------------------IRRAMS-------------KDYERHGVTGEPTGSVRLTTTPPSVEAL-LPEDRR 209 (400)
T ss_dssp HHH-----------------------HHHHTH-------------HHHHHTTCCCCCSCEEEEECCCHHHHHT-SCGGGC
T ss_pred hhH-----------------------HHHHHH-------------HHHHHhCCCcccccchhhcccCchhhcc-Cccccc
Confidence 100 000000 0011100000 11111121211111111 110000
Q ss_pred CCCCCCCCCCCCCCchhhhhhhccCCCCceEEEEecCcccCC--HHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhc
Q 043168 235 TGSRAGAGKEYGISTESCKNWLDTKPCNSVIYVSFGSQNTIA--ASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRA 312 (473)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~--~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~ 312 (473)
.................+.+|++..+++++|||||||..... ...+..+++++++.+..++|..++..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~---------- 279 (400)
T 4amg_A 210 SPGAWPMRYVPYNGGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGD---------- 279 (400)
T ss_dssp CTTCEECCCCCCCCCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTC----------
T ss_pred CCcccCcccccccccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCcc----------
Confidence 000000000011223456678988888899999999997543 46788899999999999999987652
Q ss_pred ccCCchhHHHhhccCCCCeEEecccChHHhhcccccceeeeccChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcc
Q 043168 313 NEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGV 392 (473)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~ 392 (473)
......+ ++|+.+.+|+||.++|++++ +||||||+||++||+++|||+|++|+..||+.||+++++. |+
T Consensus 280 -~~~~~~~-------~~~v~~~~~~p~~~lL~~~~--~~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~-G~ 348 (400)
T 4amg_A 280 -LALLGEL-------PANVRVVEWIPLGALLETCD--AIIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGL-GI 348 (400)
T ss_dssp -CCCCCCC-------CTTEEEECCCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHH-TS
T ss_pred -ccccccC-------CCCEEEEeecCHHHHhhhhh--heeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHC-CC
Confidence 0011111 78999999999999999966 8999999999999999999999999999999999999977 99
Q ss_pred eEEEecccCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHH
Q 043168 393 CVEVARGMNCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMIIK 438 (473)
Q Consensus 393 G~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~ 438 (473)
|+.++. .+.++ ++|+++|+|+ +||++|++++++++
T Consensus 349 g~~l~~---~~~~~----~al~~lL~d~----~~r~~a~~l~~~~~ 383 (400)
T 4amg_A 349 GFDAEA---GSLGA----EQCRRLLDDA----GLREAALRVRQEMS 383 (400)
T ss_dssp EEECCT---TTCSH----HHHHHHHHCH----HHHHHHHHHHHHHH
T ss_pred EEEcCC---CCchH----HHHHHHHcCH----HHHHHHHHHHHHHH
Confidence 999987 66665 4677899999 99999999999998
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.8e-40 Score=331.36 Aligned_cols=357 Identities=15% Similarity=0.105 Sum_probs=238.9
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhhcCCCCCCceEEeccCCCCCCCCCCCCCCCCCCCC
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDSLPF 85 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~~~~~~~~~ 85 (473)
+||+|+++++.||++|+++||++|++ +||+|+|++++.+.+.+.. .+++|+.++... .+.+. .... ..
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~-~Gh~V~~~~~~~~~~~v~~-----~g~~~~~i~~~~-~~~~~----~~~~-~~ 68 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRD-LGADVRMCAPPDCAERLAE-----VGVPHVPVGPSA-RAPIQ----RAKP-LT 68 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----TTCCEEECCC------------CCSC-CC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHH-CCCeEEEEcCHHHHHHHHH-----cCCeeeeCCCCH-HHHhh----cccc-cc
Confidence 38999999999999999999999999 9999999999988888887 566898887321 00110 0000 00
Q ss_pred CCchHHHHHHhhh-hHHHHHHHh-hhhhccCCCCCeEEEeCC-Ccch--HHHHHHHhCCcEEEEccccHHHHHHHHhhhh
Q 043168 86 HLFPNFFESTLSF-KPHFRKLIN-GLIDEQNGHKPVCIIADM-FFAW--SAEIAQEYGIFNALFVGGGSFGFACFYSLWL 160 (473)
Q Consensus 86 ~~~~~~~~~~~~~-~~~l~~~l~-~~~~~~~~~~pDlVI~D~-~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 160 (473)
...+....... ...+.++++ .. +||+||+|. +..+ +..+|+.+|||++.+.+++.+... .
T Consensus 69 --~~~~~~~~~~~~~~~~~~l~~~~~-------~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~------~ 133 (415)
T 1iir_A 69 --AEDVRRFTTEAIATQFDEIPAAAE-------GCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS------P 133 (415)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHTT-------TCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC------S
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHhc-------CCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC------c
Confidence 01111112111 223344443 33 899999998 5667 889999999999999776533211 1
Q ss_pred cCCCCCCCCcccCCCCCCcccchhhhhhhhhccCCCChHHHHHHHH------------hhhcccCceEEecchhhhcc-c
Q 043168 161 NLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKV------------LPQWMNADGILFNTVEELDK-I 227 (473)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~l~~~~~~l~~-~ 227 (473)
+.|..... +.+++ . .....+...+........+...+... .+..... ..++++++.|++ +
T Consensus 134 ~~p~~~~~-~~~~~---~--~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~ 206 (415)
T 1iir_A 134 YYPPPPLG-EPSTQ---D--TIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ 206 (415)
T ss_dssp SSCCCC---------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC
T ss_pred ccCCccCC-ccccc---h--HHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC
Confidence 11210000 00100 0 00000000000000000000000000 0111122 678899999877 2
Q ss_pred --------cCccccCCCCCCCCCCCCCCCchhhhhhhccCCCCceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEc
Q 043168 228 --------VGPLLLSTGSRAGAGKEYGISTESCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVK 299 (473)
Q Consensus 228 --------vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~ 299 (473)
|||+.... .+..+.++.+|++.. +++|||++||.. ...+.+..++++++..+.+++|+++
T Consensus 207 ~~~~~~~~vG~~~~~~---------~~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g 274 (415)
T 1iir_A 207 PTDLDAVQTGAWILPD---------ERPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRG 274 (415)
T ss_dssp CCSSCCEECCCCCCCC---------CCCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTT
T ss_pred cccCCeEeeCCCccCc---------ccCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeC
Confidence 77776543 123467889999875 468999999997 5677888899999999999999887
Q ss_pred CCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChHHhhcccccceeeeccChhhHHHHHhcCCCEEecccccch
Q 043168 300 PPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLAAEQ 379 (473)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~DQ 379 (473)
... ... .. .+.|+.+.+|+||.++|+. +++||||||+||++||+++|||+|++|+..||
T Consensus 275 ~~~-----------~~~-~~-------~~~~v~~~~~~~~~~~l~~--~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ 333 (415)
T 1iir_A 275 WAD-----------LVL-PD-------DGADCFAIGEVNHQVLFGR--VAAVIHHGGAGTTHVAARAGAPQILLPQMADQ 333 (415)
T ss_dssp CTT-----------CCC-SS-------CGGGEEECSSCCHHHHGGG--SSEEEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred CCc-----------ccc-cC-------CCCCEEEeCcCChHHHHhh--CCEEEeCCChhHHHHHHHcCCCEEECCCCCcc
Confidence 652 001 00 1568999999999999977 55899999999999999999999999999999
Q ss_pred hhhHHHHHHHHcceEEEecccCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHH
Q 043168 380 FYNSKLLEEVIGVCVEVARGMNCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMIIK 438 (473)
Q Consensus 380 ~~~a~~v~~~lG~G~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~ 438 (473)
+.||+++++. |+|+.+.. ..++.+++.++|+++ +|+ +|+++++++++.++
T Consensus 334 ~~na~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~ 383 (415)
T 1iir_A 334 PYYAGRVAEL-GVGVAHDG---PIPTFDSLSAALATA-LTP----ETHARATAVAGTIR 383 (415)
T ss_dssp HHHHHHHHHH-TSEEECSS---SSCCHHHHHHHHHHH-TSH----HHHHHHHHHHHHSC
T ss_pred HHHHHHHHHC-CCcccCCc---CCCCHHHHHHHHHHH-cCH----HHHHHHHHHHHHHh
Confidence 9999999977 99999987 678999999999999 888 89999999998875
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=9.8e-39 Score=320.19 Aligned_cols=375 Identities=13% Similarity=0.163 Sum_probs=257.7
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhhcCCCCCCceEEeccCCCCCCCCCCCCC---CC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTE---NS 80 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~~---~~ 80 (473)
+|+||+|++.++.||++|+++||++|++ +||+|+|++++.+.+.+.. .++.|..++.. ++.... ..
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~-~Gh~V~v~~~~~~~~~~~~-----~G~~~~~~~~~-----~~~~~~~~~~~ 87 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVR-RGHRVSYVTAGGFAEPVRA-----AGATVVPYQSE-----IIDADAAEVFG 87 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----TTCEEEECCCS-----TTTCCHHHHHH
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHH-CCCEEEEEeCHHHHHHHHh-----cCCEEEecccc-----ccccccchhhc
Confidence 4569999999999999999999999999 9999999999999999988 55688887632 111100 00
Q ss_pred CCCCCCCchH-HHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeC-CCcchHHHHHHHhCCcEEEEccccHHHHHHH---
Q 043168 81 DSLPFHLFPN-FFESTLSFKPHFRKLINGLIDEQNGHKPVCIIAD-MFFAWSAEIAQEYGIFNALFVGGGSFGFACF--- 155 (473)
Q Consensus 81 ~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~--- 155 (473)
...+...+.. +..........+.++++++ +||+||+| ....++..+|+.+|||++.+.+.........
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~ 160 (415)
T 3rsc_A 88 SDDLGVRPHLMYLRENVSVLRATAEALDGD-------VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSFSQ 160 (415)
T ss_dssp SSSSCHHHHHHHHHHHHHHHHHHHHHHSSS-------CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhcc-------CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCcccccc
Confidence 0011111122 3333445556778888888 99999999 7777889999999999999864332100000
Q ss_pred HhhhhcCCCCCCCCcccCCCCCCcccchhhhhhhhhccCCCChHHHHHHHHhhhcccC-ceEEecchhhhccc-------
Q 043168 156 YSLWLNLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNA-DGILFNTVEELDKI------- 227 (473)
Q Consensus 156 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~l~~~------- 227 (473)
.....+ ....+.........+..+........... ...... +..+....+.+++.
T Consensus 161 ~~~~~~----------~~~~p~~~~~~~~~~~~~~~~~g~~~~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 223 (415)
T 3rsc_A 161 DMVTLA----------GTIDPLDLPVFRDTLRDLLAEHGLSRSVV-------DCWNHVEQLNLVFVPKAFQIAGDTFDDR 223 (415)
T ss_dssp HHHHHH----------TCCCGGGCHHHHHHHHHHHHHTTCCCCHH-------HHHTCCCSEEEESSCTTTSTTGGGCCTT
T ss_pred cccccc----------ccCChhhHHHHHHHHHHHHHHcCCCCChh-------hhhcCCCCeEEEEcCcccCCCcccCCCc
Confidence 000000 00000000000111112222111111111 011112 55666666655543
Q ss_pred ---cCccccCCCCCCCCCCCCCCCchhhhhhhccCCCCceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCC
Q 043168 228 ---VGPLLLSTGSRAGAGKEYGISTESCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLGF 304 (473)
Q Consensus 228 ---vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 304 (473)
+||++... ....+|....+++++|||++||......+.+..+++++...+++++|.++.+.
T Consensus 224 ~~~vGp~~~~~--------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~-- 287 (415)
T 3rsc_A 224 FVFVGPCFDDR--------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQV-- 287 (415)
T ss_dssp EEECCCCCCCC--------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTS--
T ss_pred eEEeCCCCCCc--------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCC--
Confidence 45544322 23445665555678999999999876778889999999988899999887542
Q ss_pred CCccchhcccCCchhHHHhhccCCCCeEEecccChHHhhcccccceeeeccChhhHHHHHhcCCCEEecccccchhhhHH
Q 043168 305 DLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSK 384 (473)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a~ 384 (473)
..+.+ ...+.|+.+.+|+|+.++|++++ +||||||+||++||+++|+|+|++|...||+.||+
T Consensus 288 -----------~~~~l----~~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~ 350 (415)
T 3rsc_A 288 -----------DPAAL----GDLPPNVEAHRWVPHVKVLEQAT--VCVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMAR 350 (415)
T ss_dssp -----------CGGGG----CCCCTTEEEESCCCHHHHHHHEE--EEEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHH
T ss_pred -----------ChHHh----cCCCCcEEEEecCCHHHHHhhCC--EEEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHH
Confidence 11111 11167999999999999999966 79999999999999999999999999999999999
Q ss_pred HHHHHHcceEEEecccCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHH
Q 043168 385 LLEEVIGVCVEVARGMNCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMIIKNAVRNEEKFKGSSVKAMEQFLDAA 462 (473)
Q Consensus 385 ~v~~~lG~G~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~ 462 (473)
++++. |+|+.+.. .+++++.|.++|.++|+|+ +++++++++++.+. ..+| ..++++.+.+.+
T Consensus 351 ~l~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~-------~~~~-~~~~~~~i~~~~ 412 (415)
T 3rsc_A 351 RVDQL-GLGAVLPG---EKADGDTLLAAVGAVAADP----ALLARVEAMRGHVR-------RAGG-AARAADAVEAYL 412 (415)
T ss_dssp HHHHH-TCEEECCG---GGCCHHHHHHHHHHHHTCH----HHHHHHHHHHHHHH-------HSCH-HHHHHHHHHHHH
T ss_pred HHHHc-CCEEEccc---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH-------hcCH-HHHHHHHHHHHh
Confidence 99988 99999987 7789999999999999999 99999999999986 3344 566666665544
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.3e-39 Score=326.58 Aligned_cols=376 Identities=16% Similarity=0.062 Sum_probs=248.6
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhhcCCCCCCceEEeccCCCCCCCCCCCCCCCCCCCC
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDSLPF 85 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~~~~~~~~~ 85 (473)
+||+|++.++.||++|+++||++|++ +||+|+|++++.+.+.+.. .|++|+.++.. ....... . ..
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~-~Gh~V~~~~~~~~~~~v~~-----~g~~~~~~~~~-~~~~~~~-~------~~ 66 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKA-LGVQTRMCAPPAAEERLAE-----VGVPHVPVGLP-QHMMLQE-G------MP 66 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----HTCCEEECSCC-GGGCCCT-T------SC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHH-CCCeEEEEeCHHHHHHHHH-----cCCeeeecCCC-HHHHHhh-c------cc
Confidence 38999999999999999999999999 9999999999988888888 45588887732 0011111 0 00
Q ss_pred CCch-HHHHHHhhhhHHHHHHHh--hhhhccCCCCCeEEEeCCC-cch--HHHHHHHhCCcEEEEccccHHHHHHHHhhh
Q 043168 86 HLFP-NFFESTLSFKPHFRKLIN--GLIDEQNGHKPVCIIADMF-FAW--SAEIAQEYGIFNALFVGGGSFGFACFYSLW 159 (473)
Q Consensus 86 ~~~~-~~~~~~~~~~~~l~~~l~--~~~~~~~~~~pDlVI~D~~-~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 159 (473)
.... .+...+......+.+.+. .. +||+||+|.+ .++ +..+|+.+|||++.+.+++.+...
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~------ 133 (416)
T 1rrv_A 67 PPPPEEEQRLAAMTVEMQFDAVPGAAE-------GCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS------ 133 (416)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHTT-------TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC------
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhc-------CCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC------
Confidence 0111 111112112122222222 33 8999999973 456 788999999999998766533210
Q ss_pred hcCCCCCCCCccc-CCCCCCcccchhhhhhhhhccCCCChHHHHHHH--------HhhhcccCceEEecchhhhccc---
Q 043168 160 LNLPHRDSDEFLL-PDFPEASRIHVTQMTKFLRLADGSDSLSVFFQK--------VLPQWMNADGILFNTVEELDKI--- 227 (473)
Q Consensus 160 ~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~~~l~~~--- 227 (473)
.+.| .... +.. +++..+... ........... .......+... ..+..... .+++++++.++++
T Consensus 134 ~~~p-~~~~-~~~~~~r~~n~~~-~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~~~ 208 (416)
T 1rrv_A 134 PHLP-PAYD-EPTTPGVTDIRVL-WEERAARFADR-YGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPLQPD 208 (416)
T ss_dssp SSSC-CCBC-SCCCTTCCCHHHH-HHHHHHHHHHH-HHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCCCSS
T ss_pred cccC-CCCC-CCCCchHHHHHHH-HHHHHHHHHHH-hHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCCCCC
Confidence 1111 0000 001 110000000 00000000000 00000010000 01112233 6888998888753
Q ss_pred -----cCccccCCCCCCCCCCCCCCCchhhhhhhccCCCCceEEEEecCccc-CCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 228 -----VGPLLLSTGSRAGAGKEYGISTESCKNWLDTKPCNSVIYVSFGSQNT-IAASQMMQLAMALEACGKNFIWVVKPP 301 (473)
Q Consensus 228 -----vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~ 301 (473)
|||+..+. .+..+.++.+|++.. +++|||++||... ...+.+..++++++..+.+++|+++..
T Consensus 209 ~~~~~vG~~~~~~---------~~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~ 277 (416)
T 1rrv_A 209 VDAVQTGAWLLSD---------ERPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWT 277 (416)
T ss_dssp CCCEECCCCCCCC---------CCCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTT
T ss_pred CCeeeECCCccCc---------cCCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 67766543 123467889999875 4689999999974 345678889999999999999998865
Q ss_pred CCCCCccchhcccCCchhHHHhhccCCCCeEEecccChHHhhcccccceeeeccChhhHHHHHhcCCCEEecccccchhh
Q 043168 302 LGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFY 381 (473)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~DQ~~ 381 (473)
. ... . ..+.|+.+.+|+||.++|++++ +||||||+||++||+++|||+|++|+..||+.
T Consensus 278 ~-----------~~~-~-------~~~~~v~~~~~~~~~~ll~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~ 336 (416)
T 1rrv_A 278 E-----------LVL-P-------DDRDDCFAIDEVNFQALFRRVA--AVIHHGSAGTEHVATRAGVPQLVIPRNTDQPY 336 (416)
T ss_dssp T-----------CCC-S-------CCCTTEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEECCCSBTHHH
T ss_pred c-----------ccc-c-------CCCCCEEEeccCChHHHhccCC--EEEecCChhHHHHHHHcCCCEEEccCCCCcHH
Confidence 2 001 0 1167899999999999997755 89999999999999999999999999999999
Q ss_pred hHHHHHHHHcceEEEecccCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHH
Q 043168 382 NSKLLEEVIGVCVEVARGMNCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMIIKNAVRNEEKFKGSSVKAMEQFLDA 461 (473)
Q Consensus 382 ~a~~v~~~lG~G~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~ 461 (473)
||+++++. |+|+.+.. ..+++++|.++|+++ +|+ +|+++++++++.++ ..+| . ++++.+++.
T Consensus 337 na~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~l-~~~----~~~~~~~~~~~~~~-------~~~~-~-~~~~~i~e~ 398 (416)
T 1rrv_A 337 FAGRVAAL-GIGVAHDG---PTPTFESLSAALTTV-LAP----ETRARAEAVAGMVL-------TDGA-A-AAADLVLAA 398 (416)
T ss_dssp HHHHHHHH-TSEEECSS---SCCCHHHHHHHHHHH-TSH----HHHHHHHHHTTTCC-------CCHH-H-HHHHHHHHH
T ss_pred HHHHHHHC-CCccCCCC---CCCCHHHHHHHHHHh-hCH----HHHHHHHHHHHHHh-------hcCc-H-HHHHHHHHH
Confidence 99999977 99999887 678999999999999 998 89999999988875 3344 4 555555254
Q ss_pred HH
Q 043168 462 AL 463 (473)
Q Consensus 462 ~~ 463 (473)
+.
T Consensus 399 ~~ 400 (416)
T 1rrv_A 399 VG 400 (416)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 11
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=5.1e-39 Score=320.87 Aligned_cols=365 Identities=16% Similarity=0.116 Sum_probs=244.6
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhhcCCCCCCceEEeccCCCCCCCCCCCCCCCCCCCC
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDSLPF 85 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~~~~~~~~~ 85 (473)
+||+|++.++.||++|+++||++|++ +||+|+|++++.+.+.++. .++.|..++... ... ... . .....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~-~Gh~V~v~~~~~~~~~v~~-----~g~~~~~l~~~~--~~~-~~~-~-~~~~~ 69 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRE-LGADARMCLPPDYVERCAE-----VGVPMVPVGRAV--RAG-ARE-P-GELPP 69 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHH-TTCCEEEEECGGGHHHHHH-----TTCCEEECSSCS--SGG-GSC-T-TCCCT
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHH-CCCeEEEEeCHHHHHHHHH-----cCCceeecCCCH--HHH-hcc-c-cCCHH
Confidence 38999999999999999999999999 9999999999999999998 555888876321 101 000 0 00011
Q ss_pred CCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcchH---HHHHHHhCCcEEEEccccHHHHHHHHhhhhcC
Q 043168 86 HLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWS---AEIAQEYGIFNALFVGGGSFGFACFYSLWLNL 162 (473)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~~~---~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~ 162 (473)
.....+...+....+.+.+++ . +||+||+|.....+ ..+|+.+|||++.+..++......+...
T Consensus 70 ~~~~~~~~~~~~~~~~l~~~~--~-------~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~---- 136 (404)
T 3h4t_A 70 GAAEVVTEVVAEWFDKVPAAI--E-------GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQA---- 136 (404)
T ss_dssp TCGGGHHHHHHHHHHHHHHHH--T-------TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHH----
T ss_pred HHHHHHHHHHHHHHHHHHHHh--c-------CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHH----
Confidence 112233333333333333322 2 79999998766544 6899999999998876654211000000
Q ss_pred CCCCCCCcccCCCCCCcccchhh----hhhhhhccCC--CChHHHHHHHHhhhcccCceEEecchhhhccc---------
Q 043168 163 PHRDSDEFLLPDFPEASRIHVTQ----MTKFLRLADG--SDSLSVFFQKVLPQWMNADGILFNTVEELDKI--------- 227 (473)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~--------- 227 (473)
....... ..+.. +..+...... ...... . ...+..+.+..+.+.+.
T Consensus 137 ---------~~~~~~~--~~~~~~~~~~~~~~~~lgl~~~~~~~~---~-----~~~~~~l~~~~~~l~p~~~~~~~~~~ 197 (404)
T 3h4t_A 137 ---------ERDMYNQ--GADRLFGDAVNSHRASIGLPPVEHLYD---Y-----GYTDQPWLAADPVLSPLRPTDLGTVQ 197 (404)
T ss_dssp ---------HHHHHHH--HHHHHHHHHHHHHHHHTTCCCCCCHHH---H-----HHCSSCEECSCTTTSCCCTTCCSCCB
T ss_pred ---------HHHHHHH--HHHHHhHHHHHHHHHHcCCCCCcchhh---c-----cccCCeEEeeCcceeCCCCCCCCeEE
Confidence 0000000 00000 0000000000 000000 0 00122344444444332
Q ss_pred cCccccCCCCCCCCCCCCCCCchhhhhhhccCCCCceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCc
Q 043168 228 VGPLLLSTGSRAGAGKEYGISTESCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLGFDLN 307 (473)
Q Consensus 228 vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~ 307 (473)
+|+++.+. ....++++.+|++.. +++|||++||... ..+.+..++++++..++++||+++...
T Consensus 198 ~G~~~~~~---------~~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~----- 260 (404)
T 3h4t_A 198 TGAWILPD---------QRPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAG----- 260 (404)
T ss_dssp CCCCCCCC---------CCCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTT-----
T ss_pred eCccccCC---------CCCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcc-----
Confidence 34433221 234567888998854 5699999999987 677889999999999999999988652
Q ss_pred cchhcccCCchhHHHhhccCCCCeEEecccChHHhhcccccceeeeccChhhHHHHHhcCCCEEecccccchhhhHHHHH
Q 043168 308 SEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLE 387 (473)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~ 387 (473)
..... .+.|+.+.+|+||.++|++++ +||||||+||+.||+++|+|+|++|+..||+.||++++
T Consensus 261 ------~~~~~--------~~~~v~~~~~~~~~~ll~~~d--~~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~ 324 (404)
T 3h4t_A 261 ------LGRID--------EGDDCLVVGEVNHQVLFGRVA--AVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVA 324 (404)
T ss_dssp ------CCCSS--------CCTTEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH
T ss_pred ------ccccc--------CCCCEEEecCCCHHHHHhhCc--EEEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHH
Confidence 00111 167999999999999998855 89999999999999999999999999999999999999
Q ss_pred HHHcceEEEecccCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHH
Q 043168 388 EVIGVCVEVARGMNCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMIIKNAVRNEEKFKGSSVKAMEQFLDAALM 464 (473)
Q Consensus 388 ~~lG~G~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~ 464 (473)
+. |+|+.+.. ..++.+.|.++|+++|+ + +|+++++++++.++ . +| ..++++.+.+.++.
T Consensus 325 ~~-G~g~~l~~---~~~~~~~l~~ai~~ll~-~----~~~~~~~~~~~~~~-------~-~~-~~~~~~~i~~~~~~ 383 (404)
T 3h4t_A 325 DL-GVGVAHDG---PTPTVESLSAALATALT-P----GIRARAAAVAGTIR-------T-DG-TTVAAKLLLEAISR 383 (404)
T ss_dssp HH-TSEEECSS---SSCCHHHHHHHHHHHTS-H----HHHHHHHHHHTTCC-------C-CH-HHHHHHHHHHHHHC
T ss_pred HC-CCEeccCc---CCCCHHHHHHHHHHHhC-H----HHHHHHHHHHHHHh-------h-hH-HHHHHHHHHHHHhh
Confidence 87 99999987 77899999999999998 8 89999999999885 3 33 56666666665543
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=4e-38 Score=314.20 Aligned_cols=379 Identities=16% Similarity=0.204 Sum_probs=254.1
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhhcCCCCCCceEEeccCCCCCCCCCCCCCCCCCCC
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDSLP 84 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~~~~~~~~ 84 (473)
|+||+|++.++.||++|++.||++|++ +||+|+|++++.+.+.+.. .|++|..++... .............+
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~-~GheV~v~~~~~~~~~~~~-----~G~~~~~~~~~~--~~~~~~~~~~~~~~ 75 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELAR-RGHRITYVTTPLFADEVKA-----AGAEVVLYKSEF--DTFHVPEVVKQEDA 75 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHH-TTCEEEEEECHHHHHHHHH-----TTCEEEECCCGG--GTSSSSSSSCCTTH
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHh-CCCEEEEEcCHHHHHHHHH-----cCCEEEeccccc--ccccccccccccch
Confidence 459999999999999999999999999 9999999999999888888 556888876320 00000000000001
Q ss_pred CCCchH-HHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeC-CCcchHHHHHHHhCCcEEEEccccHHHHHHHH--hhhh
Q 043168 85 FHLFPN-FFESTLSFKPHFRKLINGLIDEQNGHKPVCIIAD-MFFAWSAEIAQEYGIFNALFVGGGSFGFACFY--SLWL 160 (473)
Q Consensus 85 ~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~--~~~~ 160 (473)
...+.. +........+.+.++++++ +||+||+| ....++..+|+.+|||+|.+.+....+..... ....
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~ 148 (402)
T 3ia7_A 76 ETQLHLVYVRENVAILRAAEEALGDN-------PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKELWK 148 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTC-------CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-------CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccccccccc
Confidence 111111 2333334456677888888 99999999 77778899999999999998643321100000 0000
Q ss_pred cCCCCCCCCcccCCCCCCcccchhhhhhhhhccCCCChHHHHHHHHhhhcccC-ceEEecchhhhccc----------cC
Q 043168 161 NLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNA-DGILFNTVEELDKI----------VG 229 (473)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~l~~~----------vG 229 (473)
.. ....+.........+.......+....... ..... +..+....+.+++. +|
T Consensus 149 ~~---------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~vG 212 (402)
T 3ia7_A 149 SN---------GQRHPADVEAVHSVLVDLLGKYGVDTPVKE-------YWDEIEGLTIVFLPKSFQPFAETFDERFAFVG 212 (402)
T ss_dssp HH---------TCCCGGGSHHHHHHHHHHHHTTTCCSCHHH-------HHTCCCSCEEESSCGGGSTTGGGCCTTEEECC
T ss_pred cc---------cccChhhHHHHHHHHHHHHHHcCCCCChhh-------hhcCCCCeEEEEcChHhCCccccCCCCeEEeC
Confidence 00 000000000001111111211111111110 11112 55555555555543 55
Q ss_pred ccccCCCCCCCCCCCCCCCchhhhhhhccCCCCceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccc
Q 043168 230 PLLLSTGSRAGAGKEYGISTESCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLGFDLNSE 309 (473)
Q Consensus 230 p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~ 309 (473)
|+.... .....|+...+++++|||++||......+.+..+++++...+..++++++.+.
T Consensus 213 p~~~~~--------------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~------- 271 (402)
T 3ia7_A 213 PTLTGR--------------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFL------- 271 (402)
T ss_dssp CCCCC------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTS-------
T ss_pred CCCCCc--------------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcC-------
Confidence 544322 13345665455678999999999877777889999999988889998887542
Q ss_pred hhcccCCchhHHHhhccCCCCeEEecccChHHhhcccccceeeeccChhhHHHHHhcCCCEEeccc-ccchhhhHHHHHH
Q 043168 310 FRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPL-AAEQFYNSKLLEE 388 (473)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~-~~DQ~~~a~~v~~ 388 (473)
..+.+ ...+.|+.+..|+|+.++|++++ ++|||||+||+.||+++|+|+|++|. ..||+.||+++++
T Consensus 272 ------~~~~~----~~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~ 339 (402)
T 3ia7_A 272 ------DPAVL----GPLPPNVEAHQWIPFHSVLAHAR--ACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIE 339 (402)
T ss_dssp ------CGGGG----CSCCTTEEEESCCCHHHHHTTEE--EEEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHH
T ss_pred ------Chhhh----CCCCCcEEEecCCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHH
Confidence 11111 11167999999999999999976 79999999999999999999999999 9999999999998
Q ss_pred HHcceEEEecccCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHH
Q 043168 389 VIGVCVEVARGMNCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMIIKNAVRNEEKFKGSSVKAMEQFLDAAL 463 (473)
Q Consensus 389 ~lG~G~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~ 463 (473)
. |+|+.+.. ..++++.+.+++.++|+|+ +++++++++++.+. ..+ +..++++.+.+.+.
T Consensus 340 ~-g~g~~~~~---~~~~~~~l~~~~~~ll~~~----~~~~~~~~~~~~~~-------~~~-~~~~~~~~i~~~~~ 398 (402)
T 3ia7_A 340 L-GLGSVLRP---DQLEPASIREAVERLAADS----AVRERVRRMQRDIL-------SSG-GPARAADEVEAYLG 398 (402)
T ss_dssp T-TSEEECCG---GGCSHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH-------TSC-HHHHHHHHHHHHHH
T ss_pred c-CCEEEccC---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHh-------hCC-hHHHHHHHHHHHHh
Confidence 8 99999987 7789999999999999999 99999999998885 333 35666666655554
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=6.1e-38 Score=316.89 Aligned_cols=384 Identities=14% Similarity=0.125 Sum_probs=245.7
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhhcCCCCCCceEEeccCCCCCCCCCCCC--CC---
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCT--EN--- 79 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~--~~--- 79 (473)
++||+|++.++.||++|+++||++|++ +||+|+|++++.+.+.+.. .|++|+.++......++.... ..
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~-~GheV~~~~~~~~~~~v~~-----~G~~~~~i~~~~~~~~~~~~~~~~~~~~ 93 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRA-AGHEVRVVASPALTEDITA-----AGLTAVPVGTDVDLVDFMTHAGHDIIDY 93 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHH-TTCEEEEEECGGGHHHHHT-----TTCCEEECSCCCCHHHHHHHTTHHHHHH
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHH-CCCeEEEEeCchhHHHHHh-----CCCceeecCCccchHHHhhhhhcccccc
Confidence 469999999999999999999999999 9999999999988888887 566898877320000000000 00
Q ss_pred --CCCC----CC-CCchHH---HHHH----h-----h-hhHHHHHHHhhhhhccCCCCCeEEEeCCCcchHHHHHHHhCC
Q 043168 80 --SDSL----PF-HLFPNF---FEST----L-----S-FKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGI 139 (473)
Q Consensus 80 --~~~~----~~-~~~~~~---~~~~----~-----~-~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~~~~~~A~~~gi 139 (473)
..+. +. ..+..+ ...+ . . ....+.++++++ +||+||+|....++..+|+.+||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~pDlVv~d~~~~~~~~aA~~lgi 166 (441)
T 2yjn_A 94 VRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW-------RPDLVIWEPLTFAAPIAAAVTGT 166 (441)
T ss_dssp HTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH-------CCSEEEECTTCTHHHHHHHHHTC
T ss_pred cccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc-------CCCEEEecCcchhHHHHHHHcCC
Confidence 0000 10 011111 1111 1 1 445566677778 99999999977888999999999
Q ss_pred cEEEEccccHHHHHH---HHhhhhcCCCCCCCCcccCCCCCCcccchhhhhhhhhccCCCChHHHHHHHHhhhcccCceE
Q 043168 140 FNALFVGGGSFGFAC---FYSLWLNLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGI 216 (473)
Q Consensus 140 P~v~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (473)
|++.+...+...... +.....+.+. ..+.. ...+.+..+......... .......+..
T Consensus 167 P~v~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~---~~~~~l~~~~~~~g~~~~--------~~~~~~~~~~ 227 (441)
T 2yjn_A 167 PHARLLWGPDITTRARQNFLGLLPDQPE--------EHRED---PLAEWLTWTLEKYGGPAF--------DEEVVVGQWT 227 (441)
T ss_dssp CEEEECSSCCHHHHHHHHHHHHGGGSCT--------TTCCC---HHHHHHHHHHHHTTCCCC--------CGGGTSCSSE
T ss_pred CEEEEecCCCcchhhhhhhhhhcccccc--------ccccc---hHHHHHHHHHHHcCCCCC--------CccccCCCeE
Confidence 999986544322111 1111111110 00000 000111111111110000 0000123445
Q ss_pred EecchhhhccccCccccCCCCCCCCCCCCCCCchhhhhhhccCCCCceEEEEecCcccC---CHHHHHHHHHHHHhCCCc
Q 043168 217 LFNTVEELDKIVGPLLLSTGSRAGAGKEYGISTESCKNWLDTKPCNSVIYVSFGSQNTI---AASQMMQLAMALEACGKN 293 (473)
Q Consensus 217 l~~~~~~l~~~vGp~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~---~~~~~~~~~~al~~~~~~ 293 (473)
+..+.+.++++.+ +........ ....+.++.+|++..+++++|||++||.... ..+.+..+++++...+++
T Consensus 228 l~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~ 301 (441)
T 2yjn_A 228 IDPAPAAIRLDTG-LKTVGMRYV-----DYNGPSVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAE 301 (441)
T ss_dssp EECSCGGGSCCCC-CCEEECCCC-----CCCSSCCCCGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSE
T ss_pred EEecCccccCCCC-CCCCceeee-----CCCCCcccchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCE
Confidence 5555555554311 100000000 0112345778998666678999999999764 346677888999888999
Q ss_pred EEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChHHhhcccccceeeeccChhhHHHHHhcCCCEEec
Q 043168 294 FIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHGVPIIGW 373 (473)
Q Consensus 294 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~ 373 (473)
++|+++... . +.+. ..+.|+.+.+|+||.++|+.++ +||||||+||++||+++|+|+|++
T Consensus 302 ~v~~~g~~~---~-------~~l~--------~~~~~v~~~~~~~~~~ll~~ad--~~V~~~G~~t~~Ea~~~G~P~i~~ 361 (441)
T 2yjn_A 302 IIATFDAQQ---L-------EGVA--------NIPDNVRTVGFVPMHALLPTCA--ATVHHGGPGSWHTAAIHGVPQVIL 361 (441)
T ss_dssp EEECCCTTT---T-------SSCS--------SCCSSEEECCSCCHHHHGGGCS--EEEECCCHHHHHHHHHTTCCEEEC
T ss_pred EEEEECCcc---h-------hhhc--------cCCCCEEEecCCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEEe
Confidence 999887541 0 0111 1167999999999999998755 899999999999999999999999
Q ss_pred ccccchhhhHHHHHHHHcceEEEecccCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhhhhhhccCCChHH
Q 043168 374 PLAAEQFYNSKLLEEVIGVCVEVARGMNCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMIIKNAVRNEEKFKGSSVK 453 (473)
Q Consensus 374 P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~~~~~~~~g~~~~ 453 (473)
|+..||+.||+++++. |+|+.+.. .+++++.|.++|.++|+|+ .|+++++++++.+. ..++ ..+
T Consensus 362 p~~~dQ~~na~~l~~~-g~g~~~~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~-------~~~~-~~~ 425 (441)
T 2yjn_A 362 PDGWDTGVRAQRTQEF-GAGIALPV---PELTPDQLRESVKRVLDDP----AHRAGAARMRDDML-------AEPS-PAE 425 (441)
T ss_dssp CCSHHHHHHHHHHHHH-TSEEECCT---TTCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH-------TSCC-HHH
T ss_pred CCcccHHHHHHHHHHc-CCEEEccc---ccCCHHHHHHHHHHHhcCH----HHHHHHHHHHHHHH-------cCCC-HHH
Confidence 9999999999999987 99999987 7789999999999999999 99999999999886 4455 556
Q ss_pred HHHHHHHHH
Q 043168 454 AMEQFLDAA 462 (473)
Q Consensus 454 ~~~~~~~~~ 462 (473)
.++.+.+.+
T Consensus 426 ~~~~i~~~~ 434 (441)
T 2yjn_A 426 VVGICEELA 434 (441)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 655555444
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=5.8e-37 Score=304.14 Aligned_cols=365 Identities=13% Similarity=0.091 Sum_probs=249.3
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhhcCCCCCCceEEeccCCCCCCCCCCCC--CCCCCC
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCT--ENSDSL 83 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~--~~~~~~ 83 (473)
+||++++.++.||++|+++||++|++ +||+|++++++...+.+.. .++++..++............ ......
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~-~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARN-AGHQVVMAANQDMGPVVTG-----VGLPAVATTDLPIRHFITTDREGRPEAIP 74 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----TTCCEEESCSSCHHHHHHBCTTSCBCCCC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHH-CCCEEEEEeCHHHHHHHHh-----CCCEEEEeCCcchHHHHhhhcccCccccC
Confidence 38999999999999999999999999 9999999999888777777 456888776320000000000 000000
Q ss_pred CC-CCchHH-----HHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcchHHHHHHHhCCcEEEEccccHHHHHHHHh
Q 043168 84 PF-HLFPNF-----FESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFGFACFYS 157 (473)
Q Consensus 84 ~~-~~~~~~-----~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~ 157 (473)
+. .....+ ..........+.++++++ +||+||+|.+..++..+|+.+|||++.+...+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~------- 140 (384)
T 2p6p_A 75 SDPVAQARFTGRWFARMAASSLPRMLDFSRAW-------RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD------- 140 (384)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC-------
T ss_pred cchHHHHHHHHHHHHhhHHHHHHHHHHHHhcc-------CCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc-------
Confidence 00 001111 111223455667778888 9999999987778889999999999988532110
Q ss_pred hhhcCCCCCCCCcccCCCCCCcccchhhhhhhhhccCCCChHHHHHHHH-hhhcccCceEEecchhhhccccCccccCCC
Q 043168 158 LWLNLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKV-LPQWMNADGILFNTVEELDKIVGPLLLSTG 236 (473)
Q Consensus 158 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~l~~~vGp~~~~~~ 236 (473)
... . ...+. .....+.... .......+.++.++.+.++++ .+......
T Consensus 141 --------------~~~------~-~~~~~---------~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~ 189 (384)
T 2p6p_A 141 --------------ADG------I-HPGAD---------AELRPELSELGLERLPAPDLFIDICPPSLRPA-NAAPARMM 189 (384)
T ss_dssp --------------CTT------T-HHHHH---------HHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT-TSCCCEEC
T ss_pred --------------cch------h-hHHHH---------HHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC-CCCCCCce
Confidence 000 0 00000 0000111110 000111567888888877654 21110000
Q ss_pred CCCCCCCCCCCCchhhhhhhccCCCCceEEEEecCcccC-----CHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchh
Q 043168 237 SRAGAGKEYGISTESCKNWLDTKPCNSVIYVSFGSQNTI-----AASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFR 311 (473)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~-----~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~ 311 (473)
... + ...+.++.+|++..+++++|||++||.... ..+.+..+++++...+++++|+++..
T Consensus 190 ~~~----~-~~~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~---------- 254 (384)
T 2p6p_A 190 RHV----A-TSRQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDT---------- 254 (384)
T ss_dssp CCC----C-CCCCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHH----------
T ss_pred Eec----C-CCCCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCC----------
Confidence 000 0 011235678887755567999999999864 45778899999999999999987632
Q ss_pred cccCCchhHHHhhccCCCCeEEecccChHHhhcccccceeeeccChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHc
Q 043168 312 ANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIG 391 (473)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG 391 (473)
..+.+.. . +.|+.+ +|+||.++|++++ +||||||+||++||+++|+|+|++|...||+.||+++++. |
T Consensus 255 ----~~~~l~~-~---~~~v~~-~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~-g 322 (384)
T 2p6p_A 255 ----VAEALRA-E---VPQARV-GWTPLDVVAPTCD--LLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADY-G 322 (384)
T ss_dssp ----HHHHHHH-H---CTTSEE-ECCCHHHHGGGCS--EEEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-T
T ss_pred ----CHHhhCC-C---CCceEE-cCCCHHHHHhhCC--EEEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHC-C
Confidence 1111211 1 679999 9999999998855 8999999999999999999999999999999999999977 9
Q ss_pred ceEEEecccCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHH
Q 043168 392 VCVEVARGMNCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMIIKNAVRNEEKFKGSSVKAMEQFLDAAL 463 (473)
Q Consensus 392 ~G~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~ 463 (473)
+|+.+.. ..++++.+.++|+++|+|+ +++++++++++.++ ..+| ..++++.+.+.+.
T Consensus 323 ~g~~~~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~-------~~~~-~~~~~~~i~~~~~ 379 (384)
T 2p6p_A 323 AAIALLP---GEDSTEAIADSCQELQAKD----TYARRAQDLSREIS-------GMPL-PATVVTALEQLAH 379 (384)
T ss_dssp SEEECCT---TCCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH-------TSCC-HHHHHHHHHHHHH
T ss_pred CeEecCc---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH-------hCCC-HHHHHHHHHHHhh
Confidence 9999887 6789999999999999999 89999999999997 4455 6677766665554
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=7e-36 Score=300.86 Aligned_cols=376 Identities=17% Similarity=0.215 Sum_probs=244.2
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhhcCCCCCCceEEeccCCCCCCCCCCCCCCCCCCC
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDSLP 84 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~~~~~~~~ 84 (473)
++||+|++.++.||++|+++||++|++ +||+|+++++..+.+.+.. .+++++.++.. ++..........
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~-~G~~V~~~~~~~~~~~~~~-----~g~~~~~~~~~-----~~~~~~~~~~~~ 75 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVA-RGHRVTYAIPPVFADKVAA-----TGPRPVLYHST-----LPGPDADPEAWG 75 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHH-TTCEEEEEECGGGHHHHHT-----TSCEEEECCCC-----SCCTTSCGGGGC
T ss_pred cceEEEEeCCCCccccchHHHHHHHHH-CCCeEEEEeCHHHHHHHHh-----CCCEEEEcCCc-----Cccccccccccc
Confidence 469999999999999999999999999 9999999999988777776 56688876621 111110000000
Q ss_pred CC---CchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcchHHHHHHHhCCcEEEEccccHHHHHHHHhhhhc
Q 043168 85 FH---LFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFGFACFYSLWLN 161 (473)
Q Consensus 85 ~~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 161 (473)
.. .+..+..........+.+++++. +||+||+|...+++..+|+.+|||+|.+.+.+.........+...
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 148 (430)
T 2iyf_A 76 STLLDNVEPFLNDAIQALPQLADAYADD-------IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEP 148 (430)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHTTS-------CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhcc-------CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccc
Confidence 01 01111222334456677788877 999999998777889999999999999875542110000000000
Q ss_pred CCCCCCCCcccCCCCCCcccchhhhhhhhhccCCCChHHHHHHHHhhhcccCceEEecchhhhccc-----------cCc
Q 043168 162 LPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVEELDKI-----------VGP 230 (473)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~-----------vGp 230 (473)
. ... ....+. .......+...+......... .......+.+++++.+.+++. |||
T Consensus 149 ~----~~~--~~~~~~-~~~~~~~~~~~~~~~g~~~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~vG~ 214 (430)
T 2iyf_A 149 M----WRE--PRQTER-GRAYYARFEAWLKENGITEHP-------DTFASHPPRSLVLIPKALQPHADRVDEDVYTFVGA 214 (430)
T ss_dssp H----HHH--HHHSHH-HHHHHHHHHHHHHHTTCCSCH-------HHHHHCCSSEEECSCGGGSTTGGGSCTTTEEECCC
T ss_pred h----hhh--hccchH-HHHHHHHHHHHHHHhCCCCCH-------HHHhcCCCcEEEeCcHHhCCCcccCCCccEEEeCC
Confidence 0 000 000000 000000011111111110000 011114567888887777643 222
Q ss_pred cccCCCCCCCCCCCCCCCchhhhhhhccCCCCceEEEEecCcccCCHHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCccc
Q 043168 231 LLLSTGSRAGAGKEYGISTESCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEAC-GKNFIWVVKPPLGFDLNSE 309 (473)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~ 309 (473)
.+.. .....+|....+++++|||++||......+.+..++++++.. +++++|++|.+.
T Consensus 215 ~~~~--------------~~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~------- 273 (430)
T 2iyf_A 215 CQGD--------------RAEEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKV------- 273 (430)
T ss_dssp CC-------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC----------
T ss_pred cCCC--------------CCCCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCC-------
Confidence 2111 111235665444577999999999854567888899999885 888988887642
Q ss_pred hhcccCCchhHHHhhccCCCCeEEecccChHHhhcccccceeeeccChhhHHHHHhcCCCEEecccccchhhhHHHHHHH
Q 043168 310 FRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEV 389 (473)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~ 389 (473)
..+.+ ...+.|+.+.+|+|+.++|++++ +||||||+||++||+++|+|+|++|...||..|++++++.
T Consensus 274 ------~~~~l----~~~~~~v~~~~~~~~~~~l~~ad--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~ 341 (430)
T 2iyf_A 274 ------TPAEL----GELPDNVEVHDWVPQLAILRQAD--LFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGL 341 (430)
T ss_dssp ------CGGGG----CSCCTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT
T ss_pred ------ChHHh----ccCCCCeEEEecCCHHHHhhccC--EEEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHc
Confidence 11111 11167899999999999999976 7999999999999999999999999999999999999977
Q ss_pred HcceEEEecccCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHH
Q 043168 390 IGVCVEVARGMNCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMIIKNAVRNEEKFKGSSVKAMEQFLDA 461 (473)
Q Consensus 390 lG~G~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~ 461 (473)
|+|+.+.. ..++++.|.++|.++|+|+ .+++++.+.+..+.+ .++ ..+.++.+.+.
T Consensus 342 -g~g~~~~~---~~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~-------~~~-~~~~~~~i~~~ 397 (430)
T 2iyf_A 342 -GVARKLAT---EEATADLLRETALALVDDP----EVARRLRRIQAEMAQ-------EGG-TRRAADLIEAE 397 (430)
T ss_dssp -TSEEECCC---C-CCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHH-------HCH-HHHHHHHHHTT
T ss_pred -CCEEEcCC---CCCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh-------cCc-HHHHHHHHHHH
Confidence 99999887 6789999999999999999 899999888888762 233 45555555443
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=2.1e-35 Score=294.36 Aligned_cols=350 Identities=14% Similarity=0.139 Sum_probs=224.6
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhhcCCCCCCceEEeccCCCCCCCCCCC--CCCCC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPC--TENSD 81 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~--~~~~~ 81 (473)
.++||+|++.++.||++|+++||++|++ +||+|++++++.+.+.+.. .++.+..++.......+... .....
T Consensus 14 ~~MrIl~~~~~~~gh~~~~~~La~~L~~-~GheV~v~~~~~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (398)
T 4fzr_A 14 SHMRILVIAGCSEGFVMPLVPLSWALRA-AGHEVLVAASENMGPTVTG-----AGLPFAPTCPSLDMPEVLSWDREGNRT 87 (398)
T ss_dssp -CCEEEEECCSSHHHHGGGHHHHHHHHH-TTCEEEEEEEGGGHHHHHH-----TTCCEEEEESSCCHHHHHSBCTTSCBC
T ss_pred CceEEEEEcCCCcchHHHHHHHHHHHHH-CCCEEEEEcCHHHHHHHHh-----CCCeeEecCCccchHhhhhhhccCccc
Confidence 3569999999999999999999999999 9999999999888888888 45577777521000000000 00000
Q ss_pred CCCCCC---c----hHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcchHHHHHHHhCCcEEEEccccHHHHHH
Q 043168 82 SLPFHL---F----PNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFGFAC 154 (473)
Q Consensus 82 ~~~~~~---~----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~ 154 (473)
..+... . ..+......+...+.++++++ +||+||+|...+++..+|+.+|||++.+..........
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~ 160 (398)
T 4fzr_A 88 TMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW-------KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELI 160 (398)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHH
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhh
Confidence 000000 0 111122234456778888888 99999999877888999999999999875442111000
Q ss_pred HHhhhhcCCCCCCCCcccCCCCCCcccchhhhhhhhhccCCCChHHHHHHHHhhhcccCceEEecchhhhccccCcccc-
Q 043168 155 FYSLWLNLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVEELDKIVGPLLL- 233 (473)
Q Consensus 155 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~vGp~~~- 233 (473)
.. .....+...+..... ......+..+......+... +....
T Consensus 161 ~~------------------------~~~~~l~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~-~~~~~~ 203 (398)
T 4fzr_A 161 KS------------------------AGVGELAPELAELGL------------TDFPDPLLSIDVCPPSMEAQ-PKPGTT 203 (398)
T ss_dssp HH------------------------HHHHHTHHHHHTTTC------------SSCCCCSEEEECSCGGGC-----CCCE
T ss_pred hH------------------------HHHHHHHHHHHHcCC------------CCCCCCCeEEEeCChhhCCC-CCCCCC
Confidence 00 000000011000000 00112234454454544433 10000
Q ss_pred -CCCCCCCCCCCCCC-CchhhhhhhccCCCCceEEEEecCcccC--------CHHHHHHHHHHHHhCCCcEEEEEcCCCC
Q 043168 234 -STGSRAGAGKEYGI-STESCKNWLDTKPCNSVIYVSFGSQNTI--------AASQMMQLAMALEACGKNFIWVVKPPLG 303 (473)
Q Consensus 234 -~~~~~~~~~~~~~~-~~~~l~~~l~~~~~~~~V~vs~GS~~~~--------~~~~~~~~~~al~~~~~~~i~~~~~~~~ 303 (473)
..+.. .. ....+.+|+...+++++|||++||.... ..+.+..+++++...+++++|+.+...
T Consensus 204 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~- 275 (398)
T 4fzr_A 204 KMRYVP-------YNGRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKL- 275 (398)
T ss_dssp ECCCCC-------CCCSSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC---
T ss_pred CeeeeC-------CCCCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcc-
Confidence 00000 01 2345667877655678999999999643 345688899999888999998876541
Q ss_pred CCCccchhcccCCchhHHHhhccCCCCeEEecccChHHhhcccccceeeeccChhhHHHHHhcCCCEEecccccchhhhH
Q 043168 304 FDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNS 383 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a 383 (473)
.+.+. ..+.|+.+.+|+|+.++|++++ +||||||.||+.||+++|+|+|++|...||+.|+
T Consensus 276 -------------~~~l~----~~~~~v~~~~~~~~~~ll~~ad--~~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a 336 (398)
T 4fzr_A 276 -------------AQTLQ----PLPEGVLAAGQFPLSAIMPACD--VVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSA 336 (398)
T ss_dssp -----------------------CCTTEEEESCCCHHHHGGGCS--EEEECCCHHHHHHHHHTTCCEEECCCSGGGHHHH
T ss_pred -------------hhhhc----cCCCcEEEeCcCCHHHHHhhCC--EEEecCCHHHHHHHHHhCCCEEecCCchhHHHHH
Confidence 11111 1178999999999999999966 8999999999999999999999999999999999
Q ss_pred HHHHHHHcceEEEecccCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHH
Q 043168 384 KLLEEVIGVCVEVARGMNCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMIIK 438 (473)
Q Consensus 384 ~~v~~~lG~G~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~ 438 (473)
+++++. |+|+.+.. ..++++.|.++|.++|+|+ ++++++++.+..+.
T Consensus 337 ~~~~~~-g~g~~~~~---~~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~ 383 (398)
T 4fzr_A 337 RLLHAA-GAGVEVPW---EQAGVESVLAACARIRDDS----SYVGNARRLAAEMA 383 (398)
T ss_dssp HHHHHT-TSEEECC----------CHHHHHHHHHHCT----HHHHHHHHHHHHHT
T ss_pred HHHHHc-CCEEecCc---ccCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHH
Confidence 999988 99999987 7789999999999999999 99999999998885
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=1e-34 Score=289.45 Aligned_cols=358 Identities=12% Similarity=0.119 Sum_probs=243.5
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhhcCCCCCCceEEeccCCCCCCCCC-------C-
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLP-------P- 75 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~ip~~~~~~~l~-------~- 75 (473)
+++||+|++.++.||++|++.||++|++ +||+|+++++ .+.+.+.. .|+.+..++......... .
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~-~GheV~v~~~-~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRT-AGHDVLIAVA-EHADRAAA-----AGLEVVDVAPDYSAVKVFEQVAKDNPR 91 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHH-TTCEEEEEES-SCHHHHHT-----TTCEEEESSTTCCHHHHHHHHHHHCHH
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHH-CCCEEEEecc-chHHHHHh-----CCCeeEecCCccCHHHHhhhcccCCcc
Confidence 3469999999999999999999999999 9999999999 88888887 556888776210000000 0
Q ss_pred ---CC-CCCCCCCCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcchHHHHHHHhCCcEEEEccccHHH
Q 043168 76 ---CT-ENSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFG 151 (473)
Q Consensus 76 ---~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~ 151 (473)
.. .............+..........+.++++++ +||+||+|...+++..+|+.+|||++.+.......
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~ 164 (398)
T 3oti_A 92 FAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY-------RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRT 164 (398)
T ss_dssp HHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCC
T ss_pred ccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc-------CCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCc
Confidence 00 00001011111233344456677889999999 99999999878888999999999999874321000
Q ss_pred HHHHHhhhhcCCCCCCCCcccCCCCCCcccchhhhhhhhhccCCCChHHHHHHHHhhhcccCceEEecchhhhccccCcc
Q 043168 152 FACFYSLWLNLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVEELDKIVGPL 231 (473)
Q Consensus 152 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~vGp~ 231 (473)
. . . . .... ..+...+..........+..+....+.+..+.++.
T Consensus 165 ~---------------------~------~-~----~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (398)
T 3oti_A 165 R---------------------G------M-H----RSIA-----SFLTDLMDKHQVSLPEPVATIESFPPSLLLEAEPE 207 (398)
T ss_dssp T---------------------T------H-H----HHHH-----TTCHHHHHHTTCCCCCCSEEECSSCGGGGTTSCCC
T ss_pred c---------------------c------h-h----hHHH-----HHHHHHHHHcCCCCCCCCeEEEeCCHHHCCCCCCC
Confidence 0 0 0 0 0000 00011111111111223445555555554331010
Q ss_pred cc-CCCCCCCCCCCCCCCchhhhhhhccCCCCceEEEEecCcccC--CHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCcc
Q 043168 232 LL-STGSRAGAGKEYGISTESCKNWLDTKPCNSVIYVSFGSQNTI--AASQMMQLAMALEACGKNFIWVVKPPLGFDLNS 308 (473)
Q Consensus 232 ~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~--~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~ 308 (473)
.. ..+.+ ...+..+.+|+...+++++|||++||.... ..+.+..+++++.+.+++++|+.+...
T Consensus 208 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~------ 274 (398)
T 3oti_A 208 GWFMRWVP-------YGGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLD------ 274 (398)
T ss_dssp SBCCCCCC-------CCCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSC------
T ss_pred CCCccccC-------CCCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcC------
Confidence 00 00000 012345567877665678999999999653 567788999999999999999887541
Q ss_pred chhcccCCchhHHHhhccCCCCeEEecccChHHhhcccccceeeeccChhhHHHHHhcCCCEEecccccchhhhH--HHH
Q 043168 309 EFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNS--KLL 386 (473)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a--~~v 386 (473)
.+.+. ..+.|+.+.+|+|+.++|++++ +||||||.||++||+++|+|+|++|+..||+.|| +++
T Consensus 275 --------~~~l~----~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~ 340 (398)
T 3oti_A 275 --------ISPLG----TLPRNVRAVGWTPLHTLLRTCT--AVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAV 340 (398)
T ss_dssp --------CGGGC----SCCTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHH
T ss_pred --------hhhhc----cCCCcEEEEccCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHH
Confidence 11111 1167999999999999999966 8999999999999999999999999999999999 999
Q ss_pred HHHHcceEEEecccCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHH
Q 043168 387 EEVIGVCVEVARGMNCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMIIKNAVRNEEKFKGSSVKAMEQFL 459 (473)
Q Consensus 387 ~~~lG~G~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~~~~~~~~g~~~~~~~~~~ 459 (473)
++. |+|+.+.. ...+++.+. ++|+|+ +|++++++.+..+. ..++ ..+.++.+.
T Consensus 341 ~~~-g~g~~~~~---~~~~~~~l~----~ll~~~----~~~~~~~~~~~~~~-------~~~~-~~~~~~~l~ 393 (398)
T 3oti_A 341 SRR-GIGLVSTS---DKVDADLLR----RLIGDE----SLRTAAREVREEMV-------ALPT-PAETVRRIV 393 (398)
T ss_dssp HHH-TSEEECCG---GGCCHHHHH----HHHHCH----HHHHHHHHHHHHHH-------TSCC-HHHHHHHHH
T ss_pred HHC-CCEEeeCC---CCCCHHHHH----HHHcCH----HHHHHHHHHHHHHH-------hCCC-HHHHHHHHH
Confidence 987 99999987 677888776 889999 99999999999986 4455 445554443
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=2.1e-33 Score=279.11 Aligned_cols=364 Identities=12% Similarity=0.105 Sum_probs=238.3
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhhcCCCCCCceEEec-cCCCCCCCCCCCCCCCCC--
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREI-PFDGIAHDLPPCTENSDS-- 82 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~i-p~~~~~~~l~~~~~~~~~-- 82 (473)
+||+|++.++.||++|++.||++|++ +||+|++++++.+.+.+.. .++++..+ +.+...............
T Consensus 2 MrIl~~~~~~~gh~~~~~~la~~L~~-~GheV~v~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (391)
T 3tsa_A 2 MRVLVVPLPYPTHLMAMVPLCWALQA-SGHEVLIAAPPELQATAHG-----AGLTTAGIRGNDRTGDTGGTTQLRFPNPA 75 (391)
T ss_dssp CEEEEECCSCHHHHHTTHHHHHHHHH-TTCEEEEEECHHHHHHHHH-----BTCEEEEC--------------CCSCCGG
T ss_pred cEEEEEcCCCcchhhhHHHHHHHHHH-CCCEEEEecChhhHHHHHh-----CCCceeeecCCccchhhhhhhcccccccc
Confidence 59999999999999999999999999 9999999999888888888 45577776 311000000000000000
Q ss_pred ---CCCCCc-hHHHHHHhhh-------hHHHHHHHhhhhhccCCCCCeEEEeCCCcchHHHHHHHhCCcEEEEccccHHH
Q 043168 83 ---LPFHLF-PNFFESTLSF-------KPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFG 151 (473)
Q Consensus 83 ---~~~~~~-~~~~~~~~~~-------~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~ 151 (473)
...... ..+......+ ...+.++++++ +||+||+|...+.+..+|+.+|||++.+.......
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 148 (391)
T 3tsa_A 76 FGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW-------RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT 148 (391)
T ss_dssp GGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT
T ss_pred cccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc-------CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc
Confidence 000011 1122222333 66778889999 99999999877788889999999999885332110
Q ss_pred HHHHHhhhhcCCCCCCCCcccCCCCCCcccchhhhhhhhhccCCCChHHHHHHHHh-hhcccCceEEecchhhhccccC-
Q 043168 152 FACFYSLWLNLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVL-PQWMNADGILFNTVEELDKIVG- 229 (473)
Q Consensus 152 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~l~~~vG- 229 (473)
..... . .....+... +.... ......+..+..+.++++...+
T Consensus 149 ~~~~~--------------------~---~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (391)
T 3tsa_A 149 AGPFS--------------------D---RAHELLDPV-------------CRHHGLTGLPTPELILDPCPPSLQASDAP 192 (391)
T ss_dssp TTHHH--------------------H---HHHHHHHHH-------------HHHTTSSSSCCCSEEEECSCGGGSCTTSC
T ss_pred ccccc--------------------c---hHHHHHHHH-------------HHHcCCCCCCCCceEEEecChhhcCCCCC
Confidence 00000 0 000000000 11100 0011224555555555544311
Q ss_pred ccccCCCCCCCCCCCCCCCchhhhhhhccCCCCceEEEEecCccc--CC-HHHHHHHHHHHHhC-CCcEEEEEcCCCCCC
Q 043168 230 PLLLSTGSRAGAGKEYGISTESCKNWLDTKPCNSVIYVSFGSQNT--IA-ASQMMQLAMALEAC-GKNFIWVVKPPLGFD 305 (473)
Q Consensus 230 p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~--~~-~~~~~~~~~al~~~-~~~~i~~~~~~~~~~ 305 (473)
...+..+.+ ...+..+..|+...+++++|||++||... .. .+.+..++++ .+. +++++|+.+...
T Consensus 193 ~~~~~~~~p-------~~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~--- 261 (391)
T 3tsa_A 193 QGAPVQYVP-------YNGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEH--- 261 (391)
T ss_dssp CCEECCCCC-------CCCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGG---
T ss_pred ccCCeeeec-------CCCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcc---
Confidence 000001110 11233455787765567899999999953 23 6778888888 776 788888776431
Q ss_pred CccchhcccCCchhHHHhhccCCCCeEEecccChHHhhcccccceeeeccChhhHHHHHhcCCCEEecccccchhhhHHH
Q 043168 306 LNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKL 385 (473)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~ 385 (473)
.+.+ ...+.|+.+.+|+|+.++|+.++ +||||||.||++||+++|+|+|++|...||+.|+.+
T Consensus 262 -----------~~~l----~~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~ 324 (391)
T 3tsa_A 262 -----------RALL----TDLPDNARIAESVPLNLFLRTCE--LVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARN 324 (391)
T ss_dssp -----------GGGC----TTCCTTEEECCSCCGGGTGGGCS--EEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHH
T ss_pred -----------hhhc----ccCCCCEEEeccCCHHHHHhhCC--EEEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHH
Confidence 1111 11167999999999999997755 899999999999999999999999999999999999
Q ss_pred HHHHHcceEEEecccCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHH
Q 043168 386 LEEVIGVCVEVARGMNCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMIIKNAVRNEEKFKGSSVKAMEQFLD 460 (473)
Q Consensus 386 v~~~lG~G~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~~~~~~~~g~~~~~~~~~~~ 460 (473)
+++. |+|+.+... ....+++.|.+++.++|+|+ ++++++++++..+. ..++ ..++++.+.+
T Consensus 325 ~~~~-g~g~~~~~~-~~~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~-------~~~~-~~~~~~~i~~ 385 (391)
T 3tsa_A 325 LAAA-GAGICLPDE-QAQSDHEQFTDSIATVLGDT----GFAAAAIKLSDEIT-------AMPH-PAALVRTLEN 385 (391)
T ss_dssp HHHT-TSEEECCSH-HHHTCHHHHHHHHHHHHTCT----HHHHHHHHHHHHHH-------TSCC-HHHHHHHHHH
T ss_pred HHHc-CCEEecCcc-cccCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH-------cCCC-HHHHHHHHHH
Confidence 9988 999988630 01378999999999999999 99999999998885 3344 5555555544
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=2.2e-31 Score=266.36 Aligned_cols=369 Identities=15% Similarity=0.162 Sum_probs=243.8
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhhcCCCCCCceEEeccCCCCCCCC--------CC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDL--------PP 75 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~ip~~~~~~~l--------~~ 75 (473)
.++||+|++.++.||++|++.||++|++ +||+|++++++...+.+.. .++++..++.. ...++ ..
T Consensus 19 ~~MrIl~~~~~~~Gh~~~~~~la~~L~~-~GheV~v~~~~~~~~~~~~-----~g~~~~~~~~~-~~~~~~~~~~~~~~~ 91 (412)
T 3otg_A 19 RHMRVLFASLGTHGHTYPLLPLATAARA-AGHEVTFATGEGFAGTLRK-----LGFEPVATGMP-VFDGFLAALRIRFDT 91 (412)
T ss_dssp CSCEEEEECCSSHHHHGGGHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----TTCEEEECCCC-HHHHHHHHHHHHHSC
T ss_pred ceeEEEEEcCCCcccHHHHHHHHHHHHH-CCCEEEEEccHHHHHHHHh-----cCCceeecCcc-cccchhhhhhhhhcc
Confidence 4679999999999999999999999999 9999999999887777777 55688877620 00000 00
Q ss_pred CCCCCCC--CCCCCch-HHHHH-HhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcchHHHHHHHhCCcEEEEccccHHH
Q 043168 76 CTENSDS--LPFHLFP-NFFES-TLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFG 151 (473)
Q Consensus 76 ~~~~~~~--~~~~~~~-~~~~~-~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~~~ 151 (473)
....... ....... .+... .......+.++++++ +||+||+|....++..+|+.+|||+|.+.......
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 164 (412)
T 3otg_A 92 DSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL-------RPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP 164 (412)
T ss_dssp SCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC
T ss_pred cCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc-------CCCEEEECchhhHHHHHHHHcCCCEEEecccccCc
Confidence 0000000 0000111 11111 223446778888999 99999999877778889999999999874432110
Q ss_pred HHHHHhhhhcCCCCCCCCcccCCCCCCcccchhhhhhhhhccCCCChHHHHHHHHhhhcccCceEEecchhhhccc---c
Q 043168 152 FACFYSLWLNLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVEELDKI---V 228 (473)
Q Consensus 152 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~---v 228 (473)
..... .....+..+......... .......++.++..+...++.. +
T Consensus 165 ~~~~~------------------------~~~~~~~~~~~~~g~~~~-------~~~~~~~~d~~i~~~~~~~~~~~~~~ 213 (412)
T 3otg_A 165 DDLTR------------------------SIEEEVRGLAQRLGLDLP-------PGRIDGFGNPFIDIFPPSLQEPEFRA 213 (412)
T ss_dssp SHHHH------------------------HHHHHHHHHHHHTTCCCC-------SSCCGGGGCCEEECSCGGGSCHHHHT
T ss_pred hhhhH------------------------HHHHHHHHHHHHcCCCCC-------cccccCCCCeEEeeCCHHhcCCcccC
Confidence 00000 000000000000000000 0000123344555554444432 0
Q ss_pred ---C-ccccCCCCCCCCCCCCCCCchhhhhh-hccCCCCceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCC
Q 043168 229 ---G-PLLLSTGSRAGAGKEYGISTESCKNW-LDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLG 303 (473)
Q Consensus 229 ---G-p~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 303 (473)
| |+.... ........+| ....+++++||+++||......+.+..+++++.+.+..++|+.+.+.
T Consensus 214 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~- 282 (412)
T 3otg_A 214 RPRRHELRPVP----------FAEQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSL- 282 (412)
T ss_dssp CTTEEECCCCC----------CCCCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSC-
T ss_pred CCCcceeeccC----------CCCCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCC-
Confidence 1 111110 0112334556 33334567999999999755678889999999988999999887542
Q ss_pred CCCccchhcccCCchhHHHhhccCCCCeEEecccChHHhhcccccceeeeccChhhHHHHHhcCCCEEecccccchhhhH
Q 043168 304 FDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNS 383 (473)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a 383 (473)
..+.+. ..+.|+.+.+|+|+.++|++++ +||+|||+||++||+++|+|+|++|...||..|+
T Consensus 283 ------------~~~~l~----~~~~~v~~~~~~~~~~~l~~ad--~~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~ 344 (412)
T 3otg_A 283 ------------DVSGLG----EVPANVRLESWVPQAALLPHVD--LVVHHGGSGTTLGALGAGVPQLSFPWAGDSFANA 344 (412)
T ss_dssp ------------CCTTCC----CCCTTEEEESCCCHHHHGGGCS--EEEESCCHHHHHHHHHHTCCEEECCCSTTHHHHH
T ss_pred ------------Chhhhc----cCCCcEEEeCCCCHHHHHhcCc--EEEECCchHHHHHHHHhCCCEEecCCchhHHHHH
Confidence 011111 1167899999999999999966 8999999999999999999999999999999999
Q ss_pred HHHHHHHcceEEEecccCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHH
Q 043168 384 KLLEEVIGVCVEVARGMNCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMIIKNAVRNEEKFKGSSVKAMEQFLDAA 462 (473)
Q Consensus 384 ~~v~~~lG~G~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~ 462 (473)
+++++. |+|..+.. ..++++.|.+++.++|+|+ .+++++.+.+..+. ..++ ..+.++.+.+.+
T Consensus 345 ~~v~~~-g~g~~~~~---~~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~l~ 407 (412)
T 3otg_A 345 QAVAQA-GAGDHLLP---DNISPDSVSGAAKRLLAEE----SYRAGARAVAAEIA-------AMPG-PDEVVRLLPGFA 407 (412)
T ss_dssp HHHHHH-TSEEECCG---GGCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHH-------HSCC-HHHHHTTHHHHH
T ss_pred HHHHHc-CCEEecCc---ccCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHh-------cCCC-HHHHHHHHHHHh
Confidence 999988 99999987 6789999999999999999 89998888888875 3343 556666555543
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=1.3e-29 Score=249.03 Aligned_cols=317 Identities=16% Similarity=0.122 Sum_probs=197.9
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcc--hhhhhhcCCCCCCceEEeccCCCCCCCCCCCCCCCCC
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSN--LKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDS 82 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~--~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~~~~~~ 82 (473)
++||++.+.||.||++|.++||++|++ +||+|+|+++... .+.+.. .++.+..++.. +++...
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~-~g~~V~~vg~~~g~e~~~v~~-----~g~~~~~i~~~----~~~~~~----- 66 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQA-RGYAVHWLGTPRGIENDLVPK-----AGLPLHLIQVS----GLRGKG----- 66 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHH-TTCEEEEEECSSSTHHHHTGG-----GTCCEEECC-----------------
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHh-CCCEEEEEECCchHhhchhhh-----cCCcEEEEECC----CcCCCC-----
Confidence 469999999999999999999999999 9999999997754 234555 45678877743 332210
Q ss_pred CCCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcch--HHHHHHHhCCcEEEEccccHHHHHHHHhhhh
Q 043168 83 LPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAW--SAEIAQEYGIFNALFVGGGSFGFACFYSLWL 160 (473)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 160 (473)
....+...+.... ......++++++ +||+||++....+ +..+|+.+|||++.+-..
T Consensus 67 -~~~~~~~~~~~~~-~~~~~~~~l~~~-------~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n------------- 124 (365)
T 3s2u_A 67 -LKSLVKAPLELLK-SLFQALRVIRQL-------RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN------------- 124 (365)
T ss_dssp -------CHHHHHH-HHHHHHHHHHHH-------CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECS-------------
T ss_pred -HHHHHHHHHHHHH-HHHHHHHHHHhc-------CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecc-------------
Confidence 0001111122221 123446788899 9999999976653 457899999999876211
Q ss_pred cCCCCCCCCcccCCCCCCcccchhhhhhhhhccCCCChHHHHHHHHhhhcccCceEEecchhhhccc-----cCccccCC
Q 043168 161 NLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVEELDKI-----VGPLLLST 235 (473)
Q Consensus 161 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~-----vGp~~~~~ 235 (473)
..|++.. +++. +.++.++......+... +|+.....
T Consensus 125 ----------~~~G~~n-----------------------r~l~------~~a~~v~~~~~~~~~~~~k~~~~g~pvr~~ 165 (365)
T 3s2u_A 125 ----------AVAGTAN-----------------------RSLA------PIARRVCEAFPDTFPASDKRLTTGNPVRGE 165 (365)
T ss_dssp ----------SSCCHHH-----------------------HHHG------GGCSEEEESSTTSSCC---CEECCCCCCGG
T ss_pred ----------hhhhhHH-----------------------Hhhc------cccceeeecccccccCcCcEEEECCCCchh
Confidence 1112110 0000 01111111111111000 23222221
Q ss_pred CCCCCCCCCCCCCchhhhhhhccCCCCceEEEEecCcccCCHHHHHHHHHHHHhC----CCcEEEEEcCCCCCCCccchh
Q 043168 236 GSRAGAGKEYGISTESCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEAC----GKNFIWVVKPPLGFDLNSEFR 311 (473)
Q Consensus 236 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~ 311 (473)
.. .....+....++++.|+|..||.+.. ...+.+.+++... +..+++.+|..
T Consensus 166 ~~------------~~~~~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~---------- 221 (365)
T 3s2u_A 166 LF------------LDAHARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQ---------- 221 (365)
T ss_dssp GC------------CCTTSSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTT----------
T ss_pred hc------------cchhhhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCcc----------
Confidence 00 00011111123466899999998753 2333445555543 45667776654
Q ss_pred cccCCchhHHHhhccCCCCeEEecccCh-HHhhcccccceeeeccChhhHHHHHhcCCCEEecccc----cchhhhHHHH
Q 043168 312 ANEWLPEGFEERIKDSGQGLVVQKWAPQ-VEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLA----AEQFYNSKLL 386 (473)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~----~DQ~~~a~~v 386 (473)
..+...+.+.+.+.++.+..|+++ .++++.++ ++|||+|.+|+.|++++|+|+|.+|+. .+|..||+.+
T Consensus 222 ----~~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aD--lvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l 295 (365)
T 3s2u_A 222 ----HAEITAERYRTVAVEADVAPFISDMAAAYAWAD--LVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFL 295 (365)
T ss_dssp ----THHHHHHHHHHTTCCCEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHH
T ss_pred ----ccccccceecccccccccccchhhhhhhhccce--EEEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHH
Confidence 223344444434678888899998 57898877 899999999999999999999999974 5899999999
Q ss_pred HHHHcceEEEecccCCccCHHHHHHHHHHHHcCChhhHHHHHHHH
Q 043168 387 EEVIGVCVEVARGMNCEVSKENLSAKFELVMNETEKGMDLRKKAS 431 (473)
Q Consensus 387 ~~~lG~G~~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~ 431 (473)
++. |+|+.+.. +.++++.|.++|.++|+|++..+.++++++
T Consensus 296 ~~~-G~a~~l~~---~~~~~~~L~~~i~~ll~d~~~~~~m~~~a~ 336 (365)
T 3s2u_A 296 VRS-GAGRLLPQ---KSTGAAELAAQLSEVLMHPETLRSMADQAR 336 (365)
T ss_dssp HTT-TSEEECCT---TTCCHHHHHHHHHHHHHCTHHHHHHHHHHH
T ss_pred HHC-CCEEEeec---CCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 988 99999987 789999999999999999944334444433
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=6.2e-27 Score=204.51 Aligned_cols=164 Identities=25% Similarity=0.438 Sum_probs=140.5
Q ss_pred CCCchhhhhhhccCCCCceEEEEecCccc-CCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhh
Q 043168 246 GISTESCKNWLDTKPCNSVIYVSFGSQNT-IAASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERI 324 (473)
Q Consensus 246 ~~~~~~l~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (473)
++++.++.+|++..+++++|||++||... .....+..+++++...+.+++|+.+... ++.+
T Consensus 5 ~~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~--------------~~~~---- 66 (170)
T 2o6l_A 5 KPLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK--------------PDTL---- 66 (170)
T ss_dssp CCCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC--------------CTTC----
T ss_pred CCCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC--------------cccC----
Confidence 45788999999877667899999999973 4567888999999888899999887541 1111
Q ss_pred ccCCCCeEEecccChHHhhcccccceeeeccChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEecccCCcc
Q 043168 325 KDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCEV 404 (473)
Q Consensus 325 ~~~~~~v~~~~~~p~~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~~ 404 (473)
+.|+.+.+|+|+.+++.++.+++||||||+||++||+++|+|+|++|...||..||+++++. |+|+.+.. ..+
T Consensus 67 ---~~~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~---~~~ 139 (170)
T 2o6l_A 67 ---GLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDF---NTM 139 (170)
T ss_dssp ---CTTEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCT---TTC
T ss_pred ---CCcEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEecc---ccC
Confidence 56899999999999996666779999999999999999999999999999999999999987 99999987 778
Q ss_pred CHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHH
Q 043168 405 SKENLSAKFELVMNETEKGMDLRKKASEVEMIIK 438 (473)
Q Consensus 405 ~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~ 438 (473)
+.+.+.++|.++|+|+ .|+++++++++.++
T Consensus 140 ~~~~l~~~i~~ll~~~----~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 140 SSTDLLNALKRVINDP----SYKENVMKLSRIQH 169 (170)
T ss_dssp CHHHHHHHHHHHHHCH----HHHHHHHHHC----
T ss_pred CHHHHHHHHHHHHcCH----HHHHHHHHHHHHhh
Confidence 9999999999999999 89999999998875
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.87 E-value=7e-20 Score=179.56 Aligned_cols=305 Identities=14% Similarity=0.142 Sum_probs=187.2
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcch--hhhhhcCCCCCCceEEeccCCCCCCCCCCCCCCCCCC
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNL--KKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDSL 83 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~--~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~~~~~~~ 83 (473)
+||++++.+..||..+++.||+.|.+ +||+|++++..... ..+.. .++++..++.. .+... .
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~-~G~~V~v~~~~~~~~~~~~~~-----~g~~~~~~~~~----~~~~~-----~- 70 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMA-QGWQVRWLGTADRMEADLVPK-----HGIEIDFIRIS----GLRGK-----G- 70 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHT-TTCEEEEEECTTSTHHHHGGG-----GTCEEEECCCC----CCTTC-----C-
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHH-cCCEEEEEecCCcchhhhccc-----cCCceEEecCC----ccCcC-----c-
Confidence 79999998888999999999999999 99999999976532 33443 35577766532 11110 0
Q ss_pred CCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCc--chHHHHHHHhCCcEEEEccccHHHHHHHHhhhhc
Q 043168 84 PFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFF--AWSAEIAQEYGIFNALFVGGGSFGFACFYSLWLN 161 (473)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 161 (473)
....+...... ......+.+++++. +||+|+++... ..+..+++..|+|+|.......
T Consensus 71 ~~~~~~~~~~~-~~~~~~l~~~l~~~-------~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~------------ 130 (364)
T 1f0k_A 71 IKALIAAPLRI-FNAWRQARAIMKAY-------KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI------------ 130 (364)
T ss_dssp HHHHHTCHHHH-HHHHHHHHHHHHHH-------CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS------------
T ss_pred cHHHHHHHHHH-HHHHHHHHHHHHhc-------CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC------------
Confidence 00000011111 12334567788888 99999998643 2456778889999986532110
Q ss_pred CCCCCCCCcccCCCCCCcccchhhhhhhhhccCCCChHHHHHHHHhhhcccCceEEecchhhhccc--cCccccCCCCCC
Q 043168 162 LPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVEELDKI--VGPLLLSTGSRA 239 (473)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~--vGp~~~~~~~~~ 239 (473)
++ . ...+ ....++.++..+...+... +|..+...
T Consensus 131 -----------~~------~-----------------~~~~------~~~~~d~v~~~~~~~~~~~~~i~n~v~~~---- 166 (364)
T 1f0k_A 131 -----------AG------L-----------------TNKW------LAKIATKVMQAFPGAFPNAEVVGNPVRTD---- 166 (364)
T ss_dssp -----------CC------H-----------------HHHH------HTTTCSEEEESSTTSSSSCEECCCCCCHH----
T ss_pred -----------Cc------H-----------------HHHH------HHHhCCEEEecChhhcCCceEeCCccchh----
Confidence 00 0 0000 0112233333222211100 12111100
Q ss_pred CCCCCCCCCchhhhhhhccCCCCceEEEEecCcccCCHHHHHHHHHHHHhC--CCcEEEEEcCCCCCCCccchhcccCCc
Q 043168 240 GAGKEYGISTESCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEAC--GKNFIWVVKPPLGFDLNSEFRANEWLP 317 (473)
Q Consensus 240 ~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~ 317 (473)
....+ .....+...+++++|++..|+... ......+++++... +.++++++|.+. .
T Consensus 167 -----~~~~~-~~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~--------------~ 224 (364)
T 1f0k_A 167 -----VLALP-LPQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS--------------Q 224 (364)
T ss_dssp -----HHTSC-CHHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC--------------H
T ss_pred -----hcccc-hhhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch--------------H
Confidence 00000 011112222235578888888753 33344455555543 466667777551 1
Q ss_pred hhHHHhhccC-CCCeEEecccCh-HHhhcccccceeeeccChhhHHHHHhcCCCEEecccc---cchhhhHHHHHHHHcc
Q 043168 318 EGFEERIKDS-GQGLVVQKWAPQ-VEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLA---AEQFYNSKLLEEVIGV 392 (473)
Q Consensus 318 ~~~~~~~~~~-~~~v~~~~~~p~-~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~---~DQ~~~a~~v~~~lG~ 392 (473)
+.+.+.+.+. ..++.+..|+++ ..+++.++ ++|+++|.+++.||+++|+|+|+.|.. .||..|++.+.+. |.
T Consensus 225 ~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad--~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~ 301 (364)
T 1f0k_A 225 QSVEQAYAEAGQPQHKVTEFIDDMAAAYAWAD--VVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GA 301 (364)
T ss_dssp HHHHHHHHHTTCTTSEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TS
T ss_pred HHHHHHHhhcCCCceEEecchhhHHHHHHhCC--EEEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-Cc
Confidence 3333333211 258999999954 77898866 799999999999999999999999987 7999999999988 99
Q ss_pred eEEEecccCCccCHHHHHHHHHHHHcCC
Q 043168 393 CVEVARGMNCEVSKENLSAKFELVMNET 420 (473)
Q Consensus 393 G~~l~~~~~~~~~~~~l~~ai~~~l~~~ 420 (473)
|..++. ...+++.++++|.++ |+
T Consensus 302 g~~~~~---~d~~~~~la~~i~~l--~~ 324 (364)
T 1f0k_A 302 AKIIEQ---PQLSVDAVANTLAGW--SR 324 (364)
T ss_dssp EEECCG---GGCCHHHHHHHHHTC--CH
T ss_pred EEEecc---ccCCHHHHHHHHHhc--CH
Confidence 998887 667799999999988 77
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.68 E-value=4.7e-15 Score=138.38 Aligned_cols=117 Identities=12% Similarity=0.058 Sum_probs=90.2
Q ss_pred CceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChH-
Q 043168 262 NSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQV- 340 (473)
Q Consensus 262 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~- 340 (473)
.+.|+|++|.... ......+++++.... ++.+++|.+. ...+.+.....+ ..|+.+..|+++.
T Consensus 157 ~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~------------~~~~~l~~~~~~-~~~v~v~~~~~~m~ 220 (282)
T 3hbm_A 157 KYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSN------------PNLKKLQKFAKL-HNNIRLFIDHENIA 220 (282)
T ss_dssp CEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTC------------TTHHHHHHHHHT-CSSEEEEESCSCHH
T ss_pred CCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCc------------hHHHHHHHHHhh-CCCEEEEeCHHHHH
Confidence 4579999997643 335566777776643 5777777652 133444443332 3589999999885
Q ss_pred HhhcccccceeeeccChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEec
Q 043168 341 EILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVAR 398 (473)
Q Consensus 341 ~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~ 398 (473)
+++..++ ++||+|| +|+.|++++|+|+|++|+..+|..||+.+++. |+++.+..
T Consensus 221 ~~m~~aD--lvI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 221 KLMNESN--KLIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp HHHHTEE--EEEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred HHHHHCC--EEEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 6888877 8999999 89999999999999999999999999999988 99998865
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.60 E-value=3.2e-15 Score=133.90 Aligned_cols=134 Identities=14% Similarity=0.124 Sum_probs=95.6
Q ss_pred CCCceEEEEecCcccCCHHHHHHH-----HHHHHhCC-CcEEEEEcCCCCCCCccchhcccCCchhHHHhh---------
Q 043168 260 PCNSVIYVSFGSQNTIAASQMMQL-----AMALEACG-KNFIWVVKPPLGFDLNSEFRANEWLPEGFEERI--------- 324 (473)
Q Consensus 260 ~~~~~V~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 324 (473)
+++++|||+.||... -.+.+..+ +++|...+ .++++.+|... ......+...+
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~-----------~~~~~~~~~~~~~~~~~~l~ 93 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNY-----------SSEFEHLVQERGGQRESQKI 93 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSS-----------CCCCCSHHHHHTCEECSCCC
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCc-----------hhhHHHHHHhhhcccccccc
Confidence 356799999999842 34444444 48887777 78999988663 00111111111
Q ss_pred ----------------ccCCCCeEEecccChH-Hhhc-ccccceeeeccChhhHHHHHhcCCCEEecccc----cchhhh
Q 043168 325 ----------------KDSGQGLVVQKWAPQV-EILS-HKSISAFLSHCGWNSVLEALSHGVPIIGWPLA----AEQFYN 382 (473)
Q Consensus 325 ----------------~~~~~~v~~~~~~p~~-~lL~-~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~----~DQ~~~ 382 (473)
....-++.+.+|+++. ++|+ .++ ++|||||+||++|++++|+|+|++|.. .||..|
T Consensus 94 p~~~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Ad--lvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~n 171 (224)
T 2jzc_A 94 PIDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSD--LVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQI 171 (224)
T ss_dssp SSCTTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCS--CEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHH
T ss_pred ccccccccccccccccccCCceEEEeeccchHHHHHHhcCC--EEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHH
Confidence 0001245677888875 7898 866 899999999999999999999999984 479999
Q ss_pred HHHHHHHHcceEEEecccCCccCHHHHHHHHHHH
Q 043168 383 SKLLEEVIGVCVEVARGMNCEVSKENLSAKFELV 416 (473)
Q Consensus 383 a~~v~~~lG~G~~l~~~~~~~~~~~~l~~ai~~~ 416 (473)
|+++++. |+++.+ +.+.|.++|.++
T Consensus 172 A~~l~~~-G~~~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 172 ADKFVEL-GYVWSC--------APTETGLIAGLR 196 (224)
T ss_dssp HHHHHHH-SCCCEE--------CSCTTTHHHHHH
T ss_pred HHHHHHC-CCEEEc--------CHHHHHHHHHHH
Confidence 9999988 998654 446677777766
No 25
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.39 E-value=3.1e-11 Score=118.36 Aligned_cols=130 Identities=14% Similarity=0.153 Sum_probs=82.6
Q ss_pred CceEEEEecCcccCCHHHHHHHHHHHHh-----CCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecc
Q 043168 262 NSVIYVSFGSQNTIAASQMMQLAMALEA-----CGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKW 336 (473)
Q Consensus 262 ~~~V~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 336 (473)
+++|+++.|...... .+..+++++.. .+..+++..+.+ ..+-+.+.+... ...++.+.++
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~------------~~~~~~l~~~~~-~~~~v~~~g~ 262 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN------------PVVREAVFPVLK-GVRNFVLLDP 262 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC------------HHHHHHHHHHHT-TCTTEEEECC
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC------------HHHHHHHHHHhc-cCCCEEEECC
Confidence 456777777553221 34445555433 245555544532 001122222222 1358888866
Q ss_pred cCh---HHhhcccccceeeeccChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEecccCCccCHHHHHHHH
Q 043168 337 APQ---VEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCEVSKENLSAKF 413 (473)
Q Consensus 337 ~p~---~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~~~~~~l~~ai 413 (473)
+++ ..+++.++ +||+++| |.+.||+++|+|+|+.+...++... .+. |.|+.+. .+++.+++++
T Consensus 263 ~g~~~~~~~~~~ad--~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~~-g~g~lv~------~d~~~la~~i 328 (376)
T 1v4v_A 263 LEYGSMAALMRASL--LLVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LKA-GILKLAG------TDPEGVYRVV 328 (376)
T ss_dssp CCHHHHHHHHHTEE--EEEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HHH-TSEEECC------SCHHHHHHHH
T ss_pred CCHHHHHHHHHhCc--EEEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hcC-CceEECC------CCHHHHHHHH
Confidence 555 57888866 7898883 4566999999999998876666552 346 8887664 2899999999
Q ss_pred HHHHcCC
Q 043168 414 ELVMNET 420 (473)
Q Consensus 414 ~~~l~~~ 420 (473)
.++|+|+
T Consensus 329 ~~ll~d~ 335 (376)
T 1v4v_A 329 KGLLENP 335 (376)
T ss_dssp HHHHTCH
T ss_pred HHHHhCh
Confidence 9999988
No 26
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.32 E-value=3.1e-09 Score=106.21 Aligned_cols=98 Identities=13% Similarity=0.077 Sum_probs=71.8
Q ss_pred CCCeEEecccCh---HHhhcccccceeeec----cChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEeccc
Q 043168 328 GQGLVVQKWAPQ---VEILSHKSISAFLSH----CGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGM 400 (473)
Q Consensus 328 ~~~v~~~~~~p~---~~lL~~~~~~~~I~H----gG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~ 400 (473)
..++.+..|+|+ ..+++.++ ++|.- |..+++.||+++|+|+|+.+. ......+... +.|+.++.
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~-- 375 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAAD--IVAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAEG-ETGLLVDG-- 375 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCS--EEEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCBT-TTEEEESS--
T ss_pred CCcEEEcCCCChHHHHHHHHhCC--EEEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhCC-CcEEECCC--
Confidence 468999999986 45777777 46644 334589999999999999753 3444445444 57877764
Q ss_pred CCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHH
Q 043168 401 NCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMII 437 (473)
Q Consensus 401 ~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~ 437 (473)
-+.++++++|.++++|++..+.+.+++++....+
T Consensus 376 ---~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~ 409 (438)
T 3c48_A 376 ---HSPHAWADALATLLDDDETRIRMGEDAVEHARTF 409 (438)
T ss_dssp ---CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhC
Confidence 4899999999999999866666777777766654
No 27
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.30 E-value=2.7e-10 Score=112.60 Aligned_cols=144 Identities=12% Similarity=0.097 Sum_probs=89.3
Q ss_pred eEEEEecCc-cc-CCHHHHHHHHHHHHh--CCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccCh
Q 043168 264 VIYVSFGSQ-NT-IAASQMMQLAMALEA--CGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQ 339 (473)
Q Consensus 264 ~V~vs~GS~-~~-~~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 339 (473)
.+++..|+. .. -+.+.+..++..+.+ .+.++ +++|.+. . +.+.+...+...++.+..++++
T Consensus 209 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l-~i~G~~~-------------~-~~l~~~~~~~~~~v~~~g~~~~ 273 (406)
T 2gek_A 209 RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEI-LIVGRGD-------------E-DELREQAGDLAGHLRFLGQVDD 273 (406)
T ss_dssp CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEE-EEESCSC-------------H-HHHHHHTGGGGGGEEECCSCCH
T ss_pred eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEE-EEEcCCc-------------H-HHHHHHHHhccCcEEEEecCCH
Confidence 466777877 43 223333334444433 24444 4455442 1 3444433322468999999997
Q ss_pred H---Hhhcccccceeee----ccCh-hhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEecccCCccCHHHHHH
Q 043168 340 V---EILSHKSISAFLS----HCGW-NSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCEVSKENLSA 411 (473)
Q Consensus 340 ~---~lL~~~~~~~~I~----HgG~-gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~~~~~~l~~ 411 (473)
. .++..+++ +|. +.|. +++.||+++|+|+|+.+. ......+... +.|...+. -+.+++.+
T Consensus 274 ~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~-----~d~~~l~~ 341 (406)
T 2gek_A 274 ATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVPV-----DDADGMAA 341 (406)
T ss_dssp HHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECCT-----TCHHHHHH
T ss_pred HHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeCC-----CCHHHHHH
Confidence 5 67878774 553 3344 489999999999999754 4555555544 67777654 48899999
Q ss_pred HHHHHHcCChhhHHHHHHHHHHH
Q 043168 412 KFELVMNETEKGMDLRKKASEVE 434 (473)
Q Consensus 412 ai~~~l~~~~~~~~~~~~a~~~~ 434 (473)
+|.++++|++..+.+.+++++..
T Consensus 342 ~i~~l~~~~~~~~~~~~~~~~~~ 364 (406)
T 2gek_A 342 ALIGILEDDQLRAGYVARASERV 364 (406)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHG
T ss_pred HHHHHHcCHHHHHHHHHHHHHHH
Confidence 99999999844444444444443
No 28
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.27 E-value=3.1e-10 Score=112.21 Aligned_cols=79 Identities=18% Similarity=0.122 Sum_probs=61.2
Q ss_pred CCCeEEecccCh---HHhhcccccceeeeccChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEecccCCcc
Q 043168 328 GQGLVVQKWAPQ---VEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCEV 404 (473)
Q Consensus 328 ~~~v~~~~~~p~---~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~~ 404 (473)
..++.+.+++++ ..+++.++ ++|+..|..+ .||.++|+|+|++|-..+++. +.+. |.|+.+..
T Consensus 281 ~~~v~l~~~l~~~~~~~l~~~ad--~vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~~------ 346 (403)
T 3ot5_A 281 HERIHLIEPLDAIDFHNFLRKSY--LVFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIGT------ 346 (403)
T ss_dssp CTTEEEECCCCHHHHHHHHHHEE--EEEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECCS------
T ss_pred CCCEEEeCCCCHHHHHHHHHhcC--EEEECCccHH-HHHHHhCCCEEEecCCCcchh----heeC-CcEEEcCC------
Confidence 468888898874 45777766 7998875333 699999999999976666654 2347 87776543
Q ss_pred CHHHHHHHHHHHHcCC
Q 043168 405 SKENLSAKFELVMNET 420 (473)
Q Consensus 405 ~~~~l~~ai~~~l~~~ 420 (473)
+++.|.+++.++|+|+
T Consensus 347 d~~~l~~ai~~ll~~~ 362 (403)
T 3ot5_A 347 NKENLIKEALDLLDNK 362 (403)
T ss_dssp CHHHHHHHHHHHHHCH
T ss_pred CHHHHHHHHHHHHcCH
Confidence 8999999999999998
No 29
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.27 E-value=1.2e-10 Score=115.01 Aligned_cols=79 Identities=16% Similarity=0.211 Sum_probs=59.9
Q ss_pred CCCeEEecccCh---HHhhcccccceeeeccChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEecccCCcc
Q 043168 328 GQGLVVQKWAPQ---VEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCEV 404 (473)
Q Consensus 328 ~~~v~~~~~~p~---~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~~ 404 (473)
..++.+.+++++ ..+++.++ ++|+-+| |.+.||.++|+|+|+..-..+++. +.+. |.++.+..
T Consensus 287 ~~~v~~~~~lg~~~~~~l~~~ad--~vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e----~v~~-G~~~lv~~------ 352 (396)
T 3dzc_A 287 VSNIVLIEPQQYLPFVYLMDRAH--IILTDSG-GIQEEAPSLGKPVLVMRETTERPE----AVAA-GTVKLVGT------ 352 (396)
T ss_dssp CTTEEEECCCCHHHHHHHHHHCS--EEEESCS-GGGTTGGGGTCCEEECCSSCSCHH----HHHH-TSEEECTT------
T ss_pred CCCEEEeCCCCHHHHHHHHHhcC--EEEECCc-cHHHHHHHcCCCEEEccCCCcchH----HHHc-CceEEcCC------
Confidence 468888777753 56777766 7999988 666799999999999855555432 3447 87755432
Q ss_pred CHHHHHHHHHHHHcCC
Q 043168 405 SKENLSAKFELVMNET 420 (473)
Q Consensus 405 ~~~~l~~ai~~~l~~~ 420 (473)
+++.|.+++.++|+|+
T Consensus 353 d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 353 NQQQICDALSLLLTDP 368 (396)
T ss_dssp CHHHHHHHHHHHHHCH
T ss_pred CHHHHHHHHHHHHcCH
Confidence 6999999999999998
No 30
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.25 E-value=5.3e-09 Score=102.74 Aligned_cols=163 Identities=11% Similarity=0.019 Sum_probs=97.0
Q ss_pred eEEEEecCcccC-CHHHHHHHHHHHHh--CCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChH
Q 043168 264 VIYVSFGSQNTI-AASQMMQLAMALEA--CGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQV 340 (473)
Q Consensus 264 ~V~vs~GS~~~~-~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 340 (473)
.+++..|+.... +.+.+-.++..+.. .+.++++ +|.+. ..+.+.........++.+..|+|+.
T Consensus 199 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i-~G~g~-------------~~~~l~~~~~~~~~~v~~~g~~~~~ 264 (394)
T 3okp_A 199 PVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLI-VGSGR-------------YESTLRRLATDVSQNVKFLGRLEYQ 264 (394)
T ss_dssp CEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEE-ECCCT-------------THHHHHHHTGGGGGGEEEEESCCHH
T ss_pred eEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEE-EcCch-------------HHHHHHHHHhcccCeEEEcCCCCHH
Confidence 567777887532 23333333333433 2455544 45431 2223333222114789999999764
Q ss_pred H---hhcccccceeee-----------ccChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEecccCCccCH
Q 043168 341 E---ILSHKSISAFLS-----------HCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCEVSK 406 (473)
Q Consensus 341 ~---lL~~~~~~~~I~-----------HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~~~~ 406 (473)
+ ++..++ ++|. -|.-+++.||+++|+|+|+.+..+ ....+. . |.|..... -+.
T Consensus 265 ~~~~~~~~ad--~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~----~~e~i~-~-~~g~~~~~-----~d~ 331 (394)
T 3okp_A 265 DMINTLAAAD--IFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGG----APETVT-P-ATGLVVEG-----SDV 331 (394)
T ss_dssp HHHHHHHHCS--EEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTT----GGGGCC-T-TTEEECCT-----TCH
T ss_pred HHHHHHHhCC--EEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCC----hHHHHh-c-CCceEeCC-----CCH
Confidence 4 677766 5665 455668999999999999976532 222222 4 56766654 479
Q ss_pred HHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHH
Q 043168 407 ENLSAKFELVMNETEKGMDLRKKASEVEMIIKNAVRNEEKFKGSSVKAMEQFLDAALM 464 (473)
Q Consensus 407 ~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~ 464 (473)
++++++|.++++|++..+.+.+++++....- =+....++++++.+.+
T Consensus 332 ~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~-----------~s~~~~~~~~~~~~~~ 378 (394)
T 3okp_A 332 DKLSELLIELLDDPIRRAAMGAAGRAHVEAE-----------WSWEIMGERLTNILQS 378 (394)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH-----------TBHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh-----------CCHHHHHHHHHHHHHH
Confidence 9999999999999855555666665544331 1234555666665543
No 31
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.20 E-value=5.6e-09 Score=106.40 Aligned_cols=97 Identities=13% Similarity=0.003 Sum_probs=67.8
Q ss_pred CCCeEEecccChH---Hhhccc----ccceeeec----cChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEE
Q 043168 328 GQGLVVQKWAPQV---EILSHK----SISAFLSH----CGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEV 396 (473)
Q Consensus 328 ~~~v~~~~~~p~~---~lL~~~----~~~~~I~H----gG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l 396 (473)
..++.+..++|+. .+++.+ + ++|.- |--.++.||+++|+|+|+... ......+... ..|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~d--v~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGS--VFALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTC--EEEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCC--EEEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEe
Confidence 4679999999764 467676 6 56532 223588999999999999753 3344444433 478877
Q ss_pred ecccCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHH
Q 043168 397 ARGMNCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMI 436 (473)
Q Consensus 397 ~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~ 436 (473)
+. -+.+.++++|.++++|++..+.+.+++++....
T Consensus 407 ~~-----~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~ 441 (499)
T 2r60_A 407 DP-----EDPEDIARGLLKAFESEETWSAYQEKGKQRVEE 441 (499)
T ss_dssp CT-----TCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CC-----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 65 488999999999999985555566665554443
No 32
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.19 E-value=1.4e-08 Score=101.25 Aligned_cols=164 Identities=12% Similarity=0.038 Sum_probs=101.5
Q ss_pred eEEEEecCcc-cC-CHHHHHHHHHHHHh----CCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEeccc
Q 043168 264 VIYVSFGSQN-TI-AASQMMQLAMALEA----CGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWA 337 (473)
Q Consensus 264 ~V~vs~GS~~-~~-~~~~~~~~~~al~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 337 (473)
.+++..|+.. .. +.+.+-.++..+.. .+.++ +++|.+. ....+.+.+...+.+.++.+..|+
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l-~i~G~g~-----------~~~~~~l~~~~~~~~~~~~~~g~~ 319 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRF-IIIGKGD-----------PELEGWARSLEEKHGNVKVITEML 319 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEE-EEECCCC-----------HHHHHHHHHHHHHCTTEEEECSCC
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEE-EEEcCCC-----------hhHHHHHHHHHhhcCCEEEEcCCC
Confidence 6777888886 33 34555555555555 23444 3445431 001123333332224556677889
Q ss_pred ChHH---hhcccccceeeec----cChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEecccCCccCHHHHH
Q 043168 338 PQVE---ILSHKSISAFLSH----CGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCEVSKENLS 410 (473)
Q Consensus 338 p~~~---lL~~~~~~~~I~H----gG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~~~~~~l~ 410 (473)
++.+ ++..++ ++|.- |--+++.||+++|+|+|+... ......+. . |.|..++. -+.++++
T Consensus 320 ~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~~-~-~~g~~~~~-----~d~~~la 386 (439)
T 3fro_A 320 SREFVRELYGSVD--FVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDIIT-N-ETGILVKA-----GDPGELA 386 (439)
T ss_dssp CHHHHHHHHTTCS--EEEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHCC-T-TTCEEECT-----TCHHHHH
T ss_pred CHHHHHHHHHHCC--EEEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeEE-c-CceEEeCC-----CCHHHHH
Confidence 9854 567766 45532 334689999999999999743 33444333 5 78887765 4899999
Q ss_pred HHHHHHHc-CChhhHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHH
Q 043168 411 AKFELVMN-ETEKGMDLRKKASEVEMIIKNAVRNEEKFKGSSVKAMEQFLDAALM 464 (473)
Q Consensus 411 ~ai~~~l~-~~~~~~~~~~~a~~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~ 464 (473)
++|.++++ |++..+.+.+++++..+.+ +....++++++.+..
T Consensus 387 ~~i~~ll~~~~~~~~~~~~~~~~~~~~~------------s~~~~~~~~~~~~~~ 429 (439)
T 3fro_A 387 NAILKALELSRSDLSKFRENCKKRAMSF------------SWEKSAERYVKAYTG 429 (439)
T ss_dssp HHHHHHHHHTTTTTHHHHHHHHHHHHTS------------CHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhC------------cHHHHHHHHHHHHHH
Confidence 99999999 8866667777777766432 245555666665544
No 33
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.14 E-value=4e-09 Score=103.45 Aligned_cols=132 Identities=14% Similarity=0.151 Sum_probs=83.4
Q ss_pred CCceEEEEecCcccCCHHHHHHHHHHHHh-----CCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEec
Q 043168 261 CNSVIYVSFGSQNTIAASQMMQLAMALEA-----CGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQK 335 (473)
Q Consensus 261 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 335 (473)
++++|+++.|...... ..+..+++++.. .+..+++..+.+ ....+.+.+.+. ...++.+.+
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~------------~~~~~~l~~~~~-~~~~v~~~g 269 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLN------------PNVREPVNRILG-HVKNVILID 269 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBC------------HHHHHHHHHHHT-TCTTEEEEC
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCC------------HHHHHHHHHHhh-cCCCEEEeC
Confidence 3557888888765332 233444444433 245555543322 001122222222 136888866
Q ss_pred ccCh---HHhhcccccceeeeccChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEecccCCccCHHHHHHH
Q 043168 336 WAPQ---VEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCEVSKENLSAK 412 (473)
Q Consensus 336 ~~p~---~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~~~~~~l~~a 412 (473)
++++ ..+++.++ +||+.+| +++.||+++|+|+|+.+...+... +.+. |.|+.++. +++.++++
T Consensus 270 ~~~~~~~~~~~~~ad--~~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~~-g~g~lv~~------d~~~la~~ 335 (384)
T 1vgv_A 270 PQEYLPFVWLMNHAW--LILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVTA-GTVRLVGT------DKQRIVEE 335 (384)
T ss_dssp CCCHHHHHHHHHHCS--EEEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHHH-TSEEEECS------SHHHHHHH
T ss_pred CCCHHHHHHHHHhCc--EEEECCc-chHHHHHHcCCCEEEccCCCCcch----hhhC-CceEEeCC------CHHHHHHH
Confidence 6664 56777766 6898885 458899999999999987444332 3457 88877753 88999999
Q ss_pred HHHHHcCC
Q 043168 413 FELVMNET 420 (473)
Q Consensus 413 i~~~l~~~ 420 (473)
|.++++|+
T Consensus 336 i~~ll~d~ 343 (384)
T 1vgv_A 336 VTRLLKDE 343 (384)
T ss_dssp HHHHHHCH
T ss_pred HHHHHhCh
Confidence 99999988
No 34
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.10 E-value=3.6e-08 Score=97.08 Aligned_cols=94 Identities=15% Similarity=0.167 Sum_probs=65.8
Q ss_pred CCeEEecccCh-HHhhcccccceee----eccChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEecccCCc
Q 043168 329 QGLVVQKWAPQ-VEILSHKSISAFL----SHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCE 403 (473)
Q Consensus 329 ~~v~~~~~~p~-~~lL~~~~~~~~I----~HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~ 403 (473)
.++.+..+..+ ..+++.++ ++| .-|..+++.||+++|+|+|+.+..+ ....+... +.|...+.
T Consensus 267 ~~v~~~g~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v~~~-~~g~~~~~----- 334 (394)
T 2jjm_A 267 DRVLFLGKQDNVAELLAMSD--LMLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVIQHG-DTGYLCEV----- 334 (394)
T ss_dssp GGBCCCBSCSCTHHHHHTCS--EEEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTCCBT-TTEEEECT-----
T ss_pred CeEEEeCchhhHHHHHHhCC--EEEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHhhcC-CceEEeCC-----
Confidence 56777776554 67888877 566 4455678999999999999987532 22223323 57777664
Q ss_pred cCHHHHHHHHHHHHcCChhhHHHHHHHHHHH
Q 043168 404 VSKENLSAKFELVMNETEKGMDLRKKASEVE 434 (473)
Q Consensus 404 ~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~ 434 (473)
-+.++++++|.++++|++..+.+.+++++..
T Consensus 335 ~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 365 (394)
T 2jjm_A 335 GDTTGVADQAIQLLKDEELHRNMGERARESV 365 (394)
T ss_dssp TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 4789999999999999855555666665554
No 35
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.07 E-value=1.4e-07 Score=91.94 Aligned_cols=148 Identities=16% Similarity=0.210 Sum_probs=95.5
Q ss_pred CceEEEEecCcccCCHHHHHHHHHHHHhCCC----c-EEEEEcCCCCCCCccchhcccCCchhHHHhhcc--CCCCeEEe
Q 043168 262 NSVIYVSFGSQNTIAASQMMQLAMALEACGK----N-FIWVVKPPLGFDLNSEFRANEWLPEGFEERIKD--SGQGLVVQ 334 (473)
Q Consensus 262 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~ 334 (473)
+..+++..|+... ...+..+++++..... + -++++|.+. .+.+.+...+ ...++.+.
T Consensus 195 ~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~--------------~~~~~~~~~~~~~~~~v~~~ 258 (374)
T 2iw1_A 195 QQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDK--------------PRKFEALAEKLGVRSNVHFF 258 (374)
T ss_dssp TCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSC--------------CHHHHHHHHHHTCGGGEEEE
T ss_pred CCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCC--------------HHHHHHHHHHcCCCCcEEEC
Confidence 3366777787653 2344555666655422 1 244455431 1222222211 13578888
Q ss_pred cccCh-HHhhcccccceeee----ccChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEecccCCccCHHHH
Q 043168 335 KWAPQ-VEILSHKSISAFLS----HCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCEVSKENL 409 (473)
Q Consensus 335 ~~~p~-~~lL~~~~~~~~I~----HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~~~~~~l 409 (473)
.+..+ ..+++.++ ++|. -|..+++.||+++|+|+|+.+. ..+...+++. +.|..+.. ..+.+++
T Consensus 259 g~~~~~~~~~~~ad--~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~----~~~~~~l 327 (374)
T 2iw1_A 259 SGRNDVSELMAAAD--LLLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAE----PFSQEQL 327 (374)
T ss_dssp SCCSCHHHHHHHCS--EEEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECS----SCCHHHH
T ss_pred CCcccHHHHHHhcC--EEEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCC----CCCHHHH
Confidence 88655 66888877 4664 4566789999999999999764 3455667766 88988762 3589999
Q ss_pred HHHHHHHHcCChhhHHHHHHHHHHHHH
Q 043168 410 SAKFELVMNETEKGMDLRKKASEVEMI 436 (473)
Q Consensus 410 ~~ai~~~l~~~~~~~~~~~~a~~~~~~ 436 (473)
+++|.++++|++..+.+.+++++....
T Consensus 328 ~~~i~~l~~~~~~~~~~~~~~~~~~~~ 354 (374)
T 2iw1_A 328 NEVLRKALTQSPLRMAWAENARHYADT 354 (374)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcChHHHHHHHHHHHHHHHH
Confidence 999999999985555666666666554
No 36
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.07 E-value=2.8e-08 Score=97.03 Aligned_cols=78 Identities=15% Similarity=0.117 Sum_probs=58.4
Q ss_pred CCeEEecccCh---HHhhcccccceeeeccChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEecccCCccC
Q 043168 329 QGLVVQKWAPQ---VEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCEVS 405 (473)
Q Consensus 329 ~~v~~~~~~p~---~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~~~ 405 (473)
.++.+.+++++ ..+++.++ ++|+.+| +.+.||+++|+|+|+.+...... .+.+. |.|+.++. +
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad--~~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~----e~v~~-g~g~~v~~------d 328 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSY--LMLTDSG-GVQEEAPSLGVPVLVLRDTTERP----EGIEA-GTLKLAGT------D 328 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCS--EEEECCH-HHHHHHHHHTCCEEECSSCCSCH----HHHHT-TSEEECCS------C
T ss_pred CCEEEeCCCCHHHHHHHHHhCc--EEEECCC-ChHHHHHhcCCCEEEecCCCCCc----eeecC-CceEEcCC------C
Confidence 68888777765 45677766 7888874 55889999999999985433322 23447 87876642 8
Q ss_pred HHHHHHHHHHHHcCC
Q 043168 406 KENLSAKFELVMNET 420 (473)
Q Consensus 406 ~~~l~~ai~~~l~~~ 420 (473)
++++++++.++++|+
T Consensus 329 ~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 329 EETIFSLADELLSDK 343 (375)
T ss_dssp HHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHhCh
Confidence 899999999999988
No 37
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.93 E-value=4.2e-08 Score=96.15 Aligned_cols=132 Identities=15% Similarity=0.139 Sum_probs=83.4
Q ss_pred CceEEEEecCcccCC-HHHHHHHHHHHHhC----CCcEEEEEcCCCCCCCccchhcccCCchhHHHh-h-ccCCCCeEEe
Q 043168 262 NSVIYVSFGSQNTIA-ASQMMQLAMALEAC----GKNFIWVVKPPLGFDLNSEFRANEWLPEGFEER-I-KDSGQGLVVQ 334 (473)
Q Consensus 262 ~~~V~vs~GS~~~~~-~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~v~~~ 334 (473)
++.|+++.|...... ...+..+++++... +..+|+..++. +.+.+.+. - .....++.+.
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~--------------~~~~l~~~~~~~~~~~~v~l~ 268 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR--------------TKKRLEDLEGFKELGDKIRFL 268 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH--------------HHHHHHTSGGGGGTGGGEEEC
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH--------------HHHHHHHHHHHhcCCCCEEEE
Confidence 558888888764332 24556666666542 56666654321 10111110 0 0013577776
Q ss_pred cccCh---HHhhcccccceeeeccChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEecccCCccCHHHHHH
Q 043168 335 KWAPQ---VEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCEVSKENLSA 411 (473)
Q Consensus 335 ~~~p~---~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~~~~~~l~~ 411 (473)
+.+++ ..+++.++ ++|+-.|. .+.||.++|+|+|+++...+.+. .++. |.++.+.. +.+.|.+
T Consensus 269 ~~lg~~~~~~l~~~ad--lvvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~-G~~~lv~~------d~~~i~~ 334 (385)
T 4hwg_A 269 PAFSFTDYVKLQMNAF--CILSDSGT-ITEEASILNLPALNIREAHERPE----GMDA-GTLIMSGF------KAERVLQ 334 (385)
T ss_dssp CCCCHHHHHHHHHHCS--EEEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHH-TCCEECCS------SHHHHHH
T ss_pred cCCCHHHHHHHHHhCc--EEEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhc-CceEEcCC------CHHHHHH
Confidence 66554 56787866 79999876 46899999999999987654222 2347 87766543 7999999
Q ss_pred HHHHHHcCCh
Q 043168 412 KFELVMNETE 421 (473)
Q Consensus 412 ai~~~l~~~~ 421 (473)
++.++|+|++
T Consensus 335 ai~~ll~d~~ 344 (385)
T 4hwg_A 335 AVKTITEEHD 344 (385)
T ss_dssp HHHHHHTTCB
T ss_pred HHHHHHhChH
Confidence 9999999983
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.88 E-value=1e-06 Score=87.18 Aligned_cols=93 Identities=15% Similarity=0.040 Sum_probs=64.3
Q ss_pred CCCeEEecccC---h---HHhhcccccceeeecc----ChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEe
Q 043168 328 GQGLVVQKWAP---Q---VEILSHKSISAFLSHC----GWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVA 397 (473)
Q Consensus 328 ~~~v~~~~~~p---~---~~lL~~~~~~~~I~Hg----G~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~ 397 (473)
..++.+..|++ + ..+++.++ ++|.-. .-+++.||+++|+|+|+.+. ..+...+... +.|...+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad--~~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASD--VILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCS--EEEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCC--EEEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC
Confidence 46888888775 2 45677766 566544 45689999999999999764 3444444433 5666542
Q ss_pred cccCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHH
Q 043168 398 RGMNCEVSKENLSAKFELVMNETEKGMDLRKKASEVE 434 (473)
Q Consensus 398 ~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~ 434 (473)
+.++++++|.++++|++..+.+.+++++..
T Consensus 365 -------d~~~la~~i~~ll~~~~~~~~~~~~a~~~~ 394 (416)
T 2x6q_A 365 -------DANEAVEVVLYLLKHPEVSKEMGAKAKERV 394 (416)
T ss_dssp -------SHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 789999999999999854445555555543
No 39
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.86 E-value=1.8e-07 Score=90.11 Aligned_cols=125 Identities=16% Similarity=0.178 Sum_probs=78.4
Q ss_pred EEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChH---H
Q 043168 265 IYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQV---E 341 (473)
Q Consensus 265 V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~---~ 341 (473)
+++..|+.. ....+..++++++..+.++++ +|.+. ..+.+.+...+...++.+..|+++. .
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i-~G~g~-------------~~~~l~~~~~~~~~~v~~~g~~~~~~l~~ 227 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVL-AGPAW-------------EPEYFDEITRRYGSTVEPIGEVGGERRLD 227 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEE-ESCCC-------------CHHHHHHHHHHHTTTEEECCCCCHHHHHH
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEE-EeCcc-------------cHHHHHHHHHHhCCCEEEeccCCHHHHHH
Confidence 445567765 234455666666666676554 45431 1222222221114799999999985 6
Q ss_pred hhcccccceeee--c-----------cC-hhhHHHHHhcCCCEEecccccchhhhHHHHHH--HHcceEEEecccCCccC
Q 043168 342 ILSHKSISAFLS--H-----------CG-WNSVLEALSHGVPIIGWPLAAEQFYNSKLLEE--VIGVCVEVARGMNCEVS 405 (473)
Q Consensus 342 lL~~~~~~~~I~--H-----------gG-~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~--~lG~G~~l~~~~~~~~~ 405 (473)
++..+++ +|. . -| -+++.||+++|+|+|+... ..+...+.. . +.|+..+ . +
T Consensus 228 ~~~~adv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~-----~-d 294 (342)
T 2iuy_A 228 LLASAHA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTD-----F-A 294 (342)
T ss_dssp HHHHCSE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSC-----C-C
T ss_pred HHHhCCE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcC-----C-C
Confidence 7777774 552 2 23 3578999999999999864 345555554 3 4554432 3 8
Q ss_pred HHHHHHHHHHHHc
Q 043168 406 KENLSAKFELVMN 418 (473)
Q Consensus 406 ~~~l~~ai~~~l~ 418 (473)
.++++++|.++++
T Consensus 295 ~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 295 PDEARRTLAGLPA 307 (342)
T ss_dssp HHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999886
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.57 E-value=1.5e-05 Score=84.74 Aligned_cols=95 Identities=11% Similarity=0.055 Sum_probs=62.4
Q ss_pred CCCeEEecc----cChHHhhc----ccccceeeec----cChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEE
Q 043168 328 GQGLVVQKW----APQVEILS----HKSISAFLSH----CGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVE 395 (473)
Q Consensus 328 ~~~v~~~~~----~p~~~lL~----~~~~~~~I~H----gG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~ 395 (473)
..+|.+..+ +|+.++.. .++ +||.- |--.++.||+++|+|+|+. |.......+... ..|+.
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaD--vfV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTC--EEEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCe--EEEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEE
Confidence 367777774 44455544 334 56643 3345899999999999996 344445555444 67887
Q ss_pred EecccCCccCHHHHHHHHHHHH----cCChhhHHHHHHHHHHH
Q 043168 396 VARGMNCEVSKENLSAKFELVM----NETEKGMDLRKKASEVE 434 (473)
Q Consensus 396 l~~~~~~~~~~~~l~~ai~~~l----~~~~~~~~~~~~a~~~~ 434 (473)
++. -+++.++++|.+++ .|++.++.+.+++++..
T Consensus 712 v~p-----~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a 749 (816)
T 3s28_A 712 IDP-----YHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRI 749 (816)
T ss_dssp ECT-----TSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHH
T ss_pred eCC-----CCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 765 48899999997776 88855555665555544
No 41
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.48 E-value=3.6e-05 Score=75.04 Aligned_cols=98 Identities=18% Similarity=0.256 Sum_probs=72.0
Q ss_pred CeEEecccCh-HHhhcccccceeee-----ccChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEecccCCc
Q 043168 330 GLVVQKWAPQ-VEILSHKSISAFLS-----HCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCE 403 (473)
Q Consensus 330 ~v~~~~~~p~-~~lL~~~~~~~~I~-----HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~ 403 (473)
++.+.++..+ ..+++.++ +++. -+|..++.||+++|+|+|+-|...+.......+.+. |.++...
T Consensus 261 ~v~~~~~~~dl~~~y~~aD--v~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~------ 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGK--IAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK------ 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEE--EEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC------
T ss_pred cEEEECCHHHHHHHHHhCC--EEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC------
Confidence 4555555444 66788877 4433 123478999999999999877777777766665546 7766542
Q ss_pred cCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHH
Q 043168 404 VSKENLSAKFELVMNETEKGMDLRKKASEVEMIIK 438 (473)
Q Consensus 404 ~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~ 438 (473)
+++.+++++.++|+| +..+.+.+++++..+.-.
T Consensus 332 -d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 332 -NETELVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp -SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 679999999999998 777789999988876654
No 42
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.45 E-value=0.00033 Score=72.06 Aligned_cols=97 Identities=18% Similarity=0.158 Sum_probs=64.2
Q ss_pred CCeEEecccChH---Hhhcccccceeee---ccChhhHHHHHhcCCCEEecccccchhhh-HHHHHHHHcceEEEecccC
Q 043168 329 QGLVVQKWAPQV---EILSHKSISAFLS---HCGWNSVLEALSHGVPIIGWPLAAEQFYN-SKLLEEVIGVCVEVARGMN 401 (473)
Q Consensus 329 ~~v~~~~~~p~~---~lL~~~~~~~~I~---HgG~gs~~eal~~GvP~i~~P~~~DQ~~~-a~~v~~~lG~G~~l~~~~~ 401 (473)
.+|.+..++|+. .++..++ +||. .|+.+++.||+++|+|+|++|-..=.... +..+... |+.-.+..
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~-g~~e~v~~--- 507 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHAD--LFLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHL-GLDEMNVA--- 507 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCS--EEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHH-TCGGGBCS---
T ss_pred hHEEeeCCCCHHHHHHHHhcCC--EEeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHC-CChhhhcC---
Confidence 678999999854 4677766 4541 26667899999999999997643211112 2334433 55533331
Q ss_pred CccCHHHHHHHHHHHHcCChhhHHHHHHHHHHH
Q 043168 402 CEVSKENLSAKFELVMNETEKGMDLRKKASEVE 434 (473)
Q Consensus 402 ~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~ 434 (473)
+++.+.+++.++++|++..+.+++++++..
T Consensus 508 ---~~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 537 (568)
T 2vsy_A 508 ---DDAAFVAKAVALASDPAALTALHARVDVLR 537 (568)
T ss_dssp ---SHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHhcCHHHHHHHHHHHHHhh
Confidence 889999999999999844445555555443
No 43
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.34 E-value=5.7e-05 Score=76.21 Aligned_cols=133 Identities=9% Similarity=-0.024 Sum_probs=75.5
Q ss_pred eEEEEecCcccC-CHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeE-EecccCh--
Q 043168 264 VIYVSFGSQNTI-AASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLV-VQKWAPQ-- 339 (473)
Q Consensus 264 ~V~vs~GS~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~p~-- 339 (473)
.+++..|..... +.+.+...+..+.+.+.++++ +|.+. ....+.+.+...+.+.++. +..+...
T Consensus 293 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~i-vG~g~-----------~~~~~~l~~~~~~~~~~v~~~~g~~~~~~ 360 (485)
T 2qzs_A 293 PLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLAL-LGAGD-----------PVLQEGFLAAAAEYPGQVGVQIGYHEAFS 360 (485)
T ss_dssp CEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEE-EEEEC-----------HHHHHHHHHHHHHSTTTEEEEESCCHHHH
T ss_pred eEEEEeccCccccCHHHHHHHHHHHhhCCcEEEE-EeCCc-----------hHHHHHHHHHHHhCCCcEEEeCCCCHHHH
Confidence 566666776532 234444444444434566554 34321 0011233333322246775 6677333
Q ss_pred HHhhcccccceeeec----cChhhHHHHHhcCCCEEecccccchhhhHHHHHHHH---------cceEEEecccCCccCH
Q 043168 340 VEILSHKSISAFLSH----CGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVI---------GVCVEVARGMNCEVSK 406 (473)
Q Consensus 340 ~~lL~~~~~~~~I~H----gG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~l---------G~G~~l~~~~~~~~~~ 406 (473)
..+++.++ ++|.- |--.++.||+++|+|+|+... ......+. .- +.|..+.. -++
T Consensus 361 ~~~~~~ad--v~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~-~~~~~~~~~~~~~G~l~~~-----~d~ 428 (485)
T 2qzs_A 361 HRIMGGAD--VILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVS-DCSLENLADGVASGFVFED-----SNA 428 (485)
T ss_dssp HHHHHHCS--EEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCC-BCCHHHHHTTCCCBEEECS-----SSH
T ss_pred HHHHHhCC--EEEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceec-cCccccccccccceEEECC-----CCH
Confidence 25687777 45532 334578899999999999754 23333332 30 36776654 488
Q ss_pred HHHHHHHHHHH---cCC
Q 043168 407 ENLSAKFELVM---NET 420 (473)
Q Consensus 407 ~~l~~ai~~~l---~~~ 420 (473)
+.++++|.+++ +|+
T Consensus 429 ~~la~~i~~ll~~~~~~ 445 (485)
T 2qzs_A 429 WSLLRAIRRAFVLWSRP 445 (485)
T ss_dssp HHHHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHcCCH
Confidence 99999999999 677
No 44
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.32 E-value=6.3e-05 Score=75.88 Aligned_cols=132 Identities=8% Similarity=-0.040 Sum_probs=77.0
Q ss_pred eEEEEecCcccC-CHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeE-EecccChH-
Q 043168 264 VIYVSFGSQNTI-AASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLV-VQKWAPQV- 340 (473)
Q Consensus 264 ~V~vs~GS~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~p~~- 340 (473)
.+++..|..... +.+.+...+..+.+.+.++++ +|.+. ...-+.+.+...+.+.++. ...+ +..
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~i-vG~g~-----------~~~~~~l~~~~~~~~~~v~~~~g~-~~~~ 358 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVV-LGAGD-----------VALEGALLAAASRHHGRVGVAIGY-NEPL 358 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEE-EECBC-----------HHHHHHHHHHHHHTTTTEEEEESC-CHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEE-EeCCc-----------hHHHHHHHHHHHhCCCcEEEecCC-CHHH
Confidence 467777887642 234444444444444566554 44331 0011233333222246776 6677 543
Q ss_pred --Hhhcccccceeeec----cChhhHHHHHhcCCCEEecccccchhhhHHHHHHHH---------cceEEEecccCCccC
Q 043168 341 --EILSHKSISAFLSH----CGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVI---------GVCVEVARGMNCEVS 405 (473)
Q Consensus 341 --~lL~~~~~~~~I~H----gG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~l---------G~G~~l~~~~~~~~~ 405 (473)
.+++.++ ++|.- |--.++.||+++|+|+|+... ......+. .- +.|...+. -+
T Consensus 359 ~~~~~~~ad--v~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~-~~~~~~~~~~~~~G~l~~~-----~d 426 (485)
T 1rzu_A 359 SHLMQAGCD--AIIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVI-DANHAALASKAATGVQFSP-----VT 426 (485)
T ss_dssp HHHHHHHCS--EEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCC-BCCHHHHHTTCCCBEEESS-----CS
T ss_pred HHHHHhcCC--EEEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheec-ccccccccccCCcceEeCC-----CC
Confidence 5677777 46532 334589999999999999754 23333232 30 26766654 47
Q ss_pred HHHHHHHHHHHH---cCC
Q 043168 406 KENLSAKFELVM---NET 420 (473)
Q Consensus 406 ~~~l~~ai~~~l---~~~ 420 (473)
++.++++|.+++ +|+
T Consensus 427 ~~~la~~i~~ll~~~~~~ 444 (485)
T 1rzu_A 427 LDGLKQAIRRTVRYYHDP 444 (485)
T ss_dssp HHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHHhCCH
Confidence 899999999999 677
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.31 E-value=7.5e-06 Score=70.69 Aligned_cols=128 Identities=9% Similarity=0.038 Sum_probs=82.7
Q ss_pred eEEEEecCcccCCHHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCccchhcccCCchhHHHhhc----cCCCCeEEecccC
Q 043168 264 VIYVSFGSQNTIAASQMMQLAMALEAC-GKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIK----DSGQGLVVQKWAP 338 (473)
Q Consensus 264 ~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~p 338 (473)
.+++..|+... ...+..+++++... +.++++ +|... ..+.+.+... ....++.+..|++
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i-~G~~~-------------~~~~l~~~~~~~~~~l~~~v~~~g~~~ 87 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYI-VGWFS-------------KGDHAERYARKIMKIAPDNVKFLGSVS 87 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEE-EBCCC-------------TTSTHHHHHHHHHHHSCTTEEEEESCC
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEE-EecCc-------------cHHHHHHHHHhhhcccCCcEEEeCCCC
Confidence 35566677752 34455666777665 556555 45432 1111111111 1156899999999
Q ss_pred h---HHhhcccccceeee---ccCh-hhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEecccCCccCHHHHHH
Q 043168 339 Q---VEILSHKSISAFLS---HCGW-NSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCEVSKENLSA 411 (473)
Q Consensus 339 ~---~~lL~~~~~~~~I~---HgG~-gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~~~~~~l~~ 411 (473)
+ ..+++.++ ++|. +.|+ .++.||+++|+|+|+... ..+...+.+. +.|+.+ . .+.+++++
T Consensus 88 ~~e~~~~~~~ad--i~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~-----~d~~~l~~ 154 (177)
T 2f9f_A 88 EEELIDLYSRCK--GLLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-N-----ADVNEIID 154 (177)
T ss_dssp HHHHHHHHHHCS--EEEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-C-----SCHHHHHH
T ss_pred HHHHHHHHHhCC--EEEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-C-----CCHHHHHH
Confidence 8 56777777 4554 3344 489999999999999753 4445555444 577776 4 38899999
Q ss_pred HHHHHHcCC
Q 043168 412 KFELVMNET 420 (473)
Q Consensus 412 ai~~~l~~~ 420 (473)
+|.++++|+
T Consensus 155 ~i~~l~~~~ 163 (177)
T 2f9f_A 155 AMKKVSKNP 163 (177)
T ss_dssp HHHHHHHCT
T ss_pred HHHHHHhCH
Confidence 999999988
No 46
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.12 E-value=0.00062 Score=66.87 Aligned_cols=88 Identities=8% Similarity=0.059 Sum_probs=57.0
Q ss_pred eEEecccCh---HHhhcccccceeee----ccChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcc-----------
Q 043168 331 LVVQKWAPQ---VEILSHKSISAFLS----HCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGV----------- 392 (473)
Q Consensus 331 v~~~~~~p~---~~lL~~~~~~~~I~----HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~----------- 392 (473)
+.+..|+|+ ..+++.++ ++|. -|.-.++.||+++|+|+|+... ......+. . |.
T Consensus 256 v~~~g~~~~~~~~~~~~~ad--v~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~-~-~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACD--VIVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFS-G-DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCS--EEEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSC-T-TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCC--EEEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHc-c-Ccccccccccccc
Confidence 777789985 44677777 4553 2334489999999999999653 23333333 2 33
Q ss_pred -----eE--EEecccCCccCHHHHHHHHHHHHcCChhhHHHHHHHHH
Q 043168 393 -----CV--EVARGMNCEVSKENLSAKFELVMNETEKGMDLRKKASE 432 (473)
Q Consensus 393 -----G~--~l~~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~ 432 (473)
|+ .+.. -+.++++++| ++++|++..+.+.+++++
T Consensus 328 ~~~~~G~~gl~~~-----~d~~~la~~i-~l~~~~~~~~~~~~~a~~ 368 (413)
T 3oy2_A 328 VDDRDGIGGIEGI-----IDVDDLVEAF-TFFKDEKNRKEYGKRVQD 368 (413)
T ss_dssp CTTTCSSCCEEEE-----CCHHHHHHHH-HHTTSHHHHHHHHHHHHH
T ss_pred cccccCcceeeCC-----CCHHHHHHHH-HHhcCHHHHHHHHHHHHH
Confidence 44 5543 3899999999 999998333344444443
No 47
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.01 E-value=0.001 Score=65.47 Aligned_cols=75 Identities=8% Similarity=0.008 Sum_probs=56.2
Q ss_pred CCCeEEecccChH---Hhhcccccceeee---ccC-hhhHHHHH-------hcCCCEEecccccchhhhHHHHHHHHcce
Q 043168 328 GQGLVVQKWAPQV---EILSHKSISAFLS---HCG-WNSVLEAL-------SHGVPIIGWPLAAEQFYNSKLLEEVIGVC 393 (473)
Q Consensus 328 ~~~v~~~~~~p~~---~lL~~~~~~~~I~---HgG-~gs~~eal-------~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G 393 (473)
..+|.+..++|+. .+++.+++ +|. +-| -+++.||+ ++|+|+|+... +... ..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cce
Confidence 5689999999875 46777774 543 233 35688999 99999999865 4433 567
Q ss_pred EE-EecccCCccCHHHHHHHHHHHHcCC
Q 043168 394 VE-VARGMNCEVSKENLSAKFELVMNET 420 (473)
Q Consensus 394 ~~-l~~~~~~~~~~~~l~~ai~~~l~~~ 420 (473)
.. +.. -+++.++++|.++++|+
T Consensus 331 ~l~v~~-----~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 331 RFGYTP-----GNADSVIAAITQALEAP 353 (406)
T ss_dssp EEEECT-----TCHHHHHHHHHHHHHCC
T ss_pred EEEeCC-----CCHHHHHHHHHHHHhCc
Confidence 66 554 48999999999999988
No 48
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.79 E-value=0.00032 Score=59.28 Aligned_cols=145 Identities=12% Similarity=0.099 Sum_probs=84.6
Q ss_pred ceEEEEecCcccCCHHHHHHHHHHHHhC----CCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccC
Q 043168 263 SVIYVSFGSQNTIAASQMMQLAMALEAC----GKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAP 338 (473)
Q Consensus 263 ~~V~vs~GS~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 338 (473)
+++++..|+... ...+..+++++... +.+ ++++|.+. ..+.+.....+.+.++.+ .|+|
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~-l~i~G~g~-------------~~~~~~~~~~~~~~~v~~-g~~~ 64 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIV-LLLKGKGP-------------DEKKIKLLAQKLGVKAEF-GFVN 64 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEE-EEEECCST-------------THHHHHHHHHHHTCEEEC-CCCC
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeE-EEEEeCCc-------------cHHHHHHHHHHcCCeEEE-eecC
Confidence 467778888753 33445555666553 233 33445431 122333322211347788 9998
Q ss_pred hH---Hhhcccccceeee----ccChhhHHHHHhcCC-CEEecccccchhhhHHHHHHHHcceEEEecccCCccCHHHHH
Q 043168 339 QV---EILSHKSISAFLS----HCGWNSVLEALSHGV-PIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCEVSKENLS 410 (473)
Q Consensus 339 ~~---~lL~~~~~~~~I~----HgG~gs~~eal~~Gv-P~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~~~~~~l~ 410 (473)
+. .+++.++ ++|. -|.-.++.||+++|+ |+|+......-. ..+... +. .+. .-+.+++.
T Consensus 65 ~~~~~~~~~~ad--v~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~---~~~~~~-~~--~~~-----~~~~~~l~ 131 (166)
T 3qhp_A 65 SNELLEILKTCT--LYVHAANVESEAIACLEAISVGIVPVIANSPLSATR---QFALDE-RS--LFE-----PNNAKDLS 131 (166)
T ss_dssp HHHHHHHHTTCS--EEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGG---GGCSSG-GG--EEC-----TTCHHHHH
T ss_pred HHHHHHHHHhCC--EEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchh---hhccCC-ce--EEc-----CCCHHHHH
Confidence 74 4676766 5654 233458999999996 999943221111 111112 22 222 34899999
Q ss_pred HHHHHHHcCChhhHHHHHHHHHHHHHH
Q 043168 411 AKFELVMNETEKGMDLRKKASEVEMII 437 (473)
Q Consensus 411 ~ai~~~l~~~~~~~~~~~~a~~~~~~~ 437 (473)
++|.++++|++..+.+.+++++..+.+
T Consensus 132 ~~i~~l~~~~~~~~~~~~~~~~~~~~~ 158 (166)
T 3qhp_A 132 AKIDWWLENKLERERMQNEYAKSALNY 158 (166)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHC
Confidence 999999999866666777777665443
No 49
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.75 E-value=0.0006 Score=59.52 Aligned_cols=93 Identities=12% Similarity=0.048 Sum_probs=66.5
Q ss_pred CeEE-ecccCh---HHhhcccccceeeecc---C-hhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEecccC
Q 043168 330 GLVV-QKWAPQ---VEILSHKSISAFLSHC---G-WNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMN 401 (473)
Q Consensus 330 ~v~~-~~~~p~---~~lL~~~~~~~~I~Hg---G-~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~ 401 (473)
++.+ ..++++ ..++..++ ++|... | ..++.||+++|+|+|+... ......+ .. +.|.....
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad--~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVD--FVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCS--EEEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCC--EEEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecC---
Confidence 8888 999985 45677766 455432 2 4578999999999998753 3444444 34 67877764
Q ss_pred CccCHHHHHHHHHHHHc-CChhhHHHHHHHHHHHH
Q 043168 402 CEVSKENLSAKFELVMN-ETEKGMDLRKKASEVEM 435 (473)
Q Consensus 402 ~~~~~~~l~~ai~~~l~-~~~~~~~~~~~a~~~~~ 435 (473)
-+.+.+.++|.++++ |++..+.+.+++++...
T Consensus 165 --~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~ 197 (200)
T 2bfw_A 165 --GDPGELANAILKALELSRSDLSKFRENCKKRAM 197 (200)
T ss_dssp --TCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 489999999999999 98555556666655443
No 50
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.61 E-value=0.0017 Score=68.68 Aligned_cols=152 Identities=14% Similarity=0.209 Sum_probs=96.6
Q ss_pred CCceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhcc---CCCCeEEeccc
Q 043168 261 CNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKD---SGQGLVVQKWA 337 (473)
Q Consensus 261 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~ 337 (473)
++.+||.+|-+....+++.+..-.+.|++.+--++|....+. .....+...... .++.+++.+..
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~------------~~~~~l~~~~~~~gi~~~r~~f~~~~ 588 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPA------------VGEPNIQQYAQNMGLPQNRIIFSPVA 588 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTG------------GGHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcH------------HHHHHHHHHHHhcCCCcCeEEECCCC
Confidence 455899999988889999999999999998888888876541 111222222211 14567888888
Q ss_pred ChHHhhc-ccccceee---eccChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEecccCCccCHHHHHHHH
Q 043168 338 PQVEILS-HKSISAFL---SHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCEVSKENLSAKF 413 (473)
Q Consensus 338 p~~~lL~-~~~~~~~I---~HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~~~~~~l~~ai 413 (473)
|..+.|. +..+++++ ..+|.+|++|||.+|||+|.+|-..=--..+..+-+.+|+.-.+.. +.++-.+..
T Consensus 589 ~~~~~l~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~------~~~~Y~~~a 662 (723)
T 4gyw_A 589 PKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAK------NRQEYEDIA 662 (723)
T ss_dssp CHHHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCS------SHHHHHHHH
T ss_pred CHHHHHHHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccC------CHHHHHHHH
Confidence 8766554 23344564 4788999999999999999998432222233333333366544433 455554444
Q ss_pred HHHHcCChhhHHHHHHH
Q 043168 414 ELVMNETEKGMDLRKKA 430 (473)
Q Consensus 414 ~~~l~~~~~~~~~~~~a 430 (473)
.++-+|++....+|++.
T Consensus 663 ~~la~d~~~l~~lr~~l 679 (723)
T 4gyw_A 663 VKLGTDLEYLKKVRGKV 679 (723)
T ss_dssp HHHHHCHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHH
Confidence 46777874444444443
No 51
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.53 E-value=0.0043 Score=59.55 Aligned_cols=107 Identities=16% Similarity=0.031 Sum_probs=72.6
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEEcCCcchhhhhhcCCCCCCce-EEeccCCCCCCCCCCCCCCC
Q 043168 3 QRKENIVMFPLMAQGHIIPFLALALHLENT-NRYTITFVNTPSNLKKLKSSLPQNSSIH-LREIPFDGIAHDLPPCTENS 80 (473)
Q Consensus 3 ~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~-rGh~Vt~~~~~~~~~~v~~~~~~~~~~~-~~~ip~~~~~~~l~~~~~~~ 80 (473)
-.++|||++-....|++.=..++.+.|++. .+.+|++++.+.+.+.++.. +.+. ++.++..
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~----p~vd~vi~~~~~------------- 68 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN----PNIDELIVVDKK------------- 68 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC----TTCSEEEEECCS-------------
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC----CCccEEEEeCcc-------------
Confidence 346799999999999999999999999983 49999999999888777653 3333 3333210
Q ss_pred CCCCCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCC-eEEEeCCCcchHHHHHHHhCCcEEE
Q 043168 81 DSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKP-VCIIADMFFAWSAEIAQEYGIFNAL 143 (473)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-DlVI~D~~~~~~~~~A~~~giP~v~ 143 (473)
... ...... ..+...++.. ++ |++|.-....-...++...|+|...
T Consensus 69 ------~~~---~~~~~~-~~l~~~Lr~~-------~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 ------GRH---NSISGL-NEVAREINAK-------GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp ------SHH---HHHHHH-HHHHHHHHHH-------CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred ------ccc---ccHHHH-HHHHHHHhhC-------CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 000 111111 1233455666 89 9999765555566778889999654
No 52
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.49 E-value=0.0014 Score=66.72 Aligned_cols=151 Identities=11% Similarity=0.064 Sum_probs=92.4
Q ss_pred ceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEE--EcCCCCCCCccchhcccCCchhHHHhhc--cCCCCeEEecccC
Q 043168 263 SVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWV--VKPPLGFDLNSEFRANEWLPEGFEERIK--DSGQGLVVQKWAP 338 (473)
Q Consensus 263 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~p 338 (473)
.++|.+|.+.....++.+....+.+++.+..++|. .+... + .-..+..+.. ...+.+.+.+++|
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~------g------~~~~~~~~~~~~GI~~Rv~F~g~~p 508 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN------G------ITHPYVERFIKSYLGDSATAHPHSP 508 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC------G------GGHHHHHHHHHHHHGGGEEEECCCC
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc------h------hhHHHHHHHHHcCCCccEEEcCCCC
Confidence 58999999988888999999888888877777764 34221 0 1111111111 0024677788888
Q ss_pred hHHhh---cccccceee---eccChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEE-EecccCCccCHHHHHH
Q 043168 339 QVEIL---SHKSISAFL---SHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVE-VARGMNCEVSKENLSA 411 (473)
Q Consensus 339 ~~~lL---~~~~~~~~I---~HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~-l~~~~~~~~~~~~l~~ 411 (473)
..+.+ ..++ +++ ..+|..|++||+++|||+|..+-..=.-..+..+-..+|+.-. +. -+.++..+
T Consensus 509 ~~e~la~y~~aD--IfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA------~d~eeYv~ 580 (631)
T 3q3e_A 509 YHQYLRILHNCD--MMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIA------NTVDEYVE 580 (631)
T ss_dssp HHHHHHHHHTCS--EEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEE------SSHHHHHH
T ss_pred HHHHHHHHhcCc--EEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceec------CCHHHHHH
Confidence 76644 5555 443 3477899999999999999987432111121111112254321 22 26778888
Q ss_pred HHHHHHcCChhhHHHHHHHHHH
Q 043168 412 KFELVMNETEKGMDLRKKASEV 433 (473)
Q Consensus 412 ai~~~l~~~~~~~~~~~~a~~~ 433 (473)
...++.+|++.++.+|+++++-
T Consensus 581 ~Av~La~D~~~l~~LR~~Lr~~ 602 (631)
T 3q3e_A 581 RAVRLAENHQERLELRRYIIEN 602 (631)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHS
T ss_pred HHHHHhCCHHHHHHHHHHHHHH
Confidence 8888999985555555554443
No 53
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.18 E-value=0.035 Score=52.88 Aligned_cols=103 Identities=11% Similarity=-0.039 Sum_probs=65.8
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEEcCCcchhhhhhcCCCCCCc-eEEeccCCCCCCCCCCCCCCCCCC
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENT-NRYTITFVNTPSNLKKLKSSLPQNSSI-HLREIPFDGIAHDLPPCTENSDSL 83 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~-rGh~Vt~~~~~~~~~~v~~~~~~~~~~-~~~~ip~~~~~~~l~~~~~~~~~~ 83 (473)
+||+++.....|++.=..++.+.|++. .+.+|++++.+.+.+.++.. +.+ +++.++. .. .
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~----p~i~~v~~~~~-------~~-------~ 62 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM----PEVNEAIPMPL-------GH-------G 62 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC----TTEEEEEEC-------------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC----CccCEEEEecC-------Cc-------c
Confidence 389999999999999899999999883 49999999998887776542 233 2332221 00 0
Q ss_pred CCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcchHHHHHHHhCCcEE
Q 043168 84 PFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNA 142 (473)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~~~~~~A~~~giP~v 142 (473)
. ..+ .....+.+.++.. +||+||.-....-...++...|+|..
T Consensus 63 ~----~~~-----~~~~~l~~~l~~~-------~~D~vid~~~~~~sa~~~~~~~~~~~ 105 (348)
T 1psw_A 63 A----LEI-----GERRKLGHSLREK-------RYDRAYVLPNSFKSALVPLFAGIPHR 105 (348)
T ss_dssp ------CH-----HHHHHHHHHTTTT-------TCSEEEECSCCSGGGHHHHHTTCSEE
T ss_pred c----cch-----HHHHHHHHHHHhc-------CCCEEEECCCChHHHHHHHHhCCCEE
Confidence 0 000 1112334455556 89999933333445667888899974
No 54
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.01 E-value=0.0017 Score=62.01 Aligned_cols=95 Identities=18% Similarity=0.218 Sum_probs=71.1
Q ss_pred CeEEecccChHHh---hcccccceeeeccCh---------hhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEe
Q 043168 330 GLVVQKWAPQVEI---LSHKSISAFLSHCGW---------NSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVA 397 (473)
Q Consensus 330 ~v~~~~~~p~~~l---L~~~~~~~~I~HgG~---------gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~ 397 (473)
|+...+|+|+.++ |+.++.+++.+-+.. +-+.|++++|+|+|+.+ ...++..|++. |+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC
Confidence 9999999999775 444455444422322 34789999999999864 56777888888 9999875
Q ss_pred cccCCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHH
Q 043168 398 RGMNCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMIIK 438 (473)
Q Consensus 398 ~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~ 438 (473)
+.+++.+++..+.. +..+.+++++++.++.++
T Consensus 290 -------~~~e~~~~i~~l~~--~~~~~m~~na~~~a~~~~ 321 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVNE--DEYIELVKNVRSFNPILR 321 (339)
T ss_dssp -------SHHHHHHHHHHCCH--HHHHHHHHHHHHHTHHHH
T ss_pred -------CHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHhh
Confidence 36788888887643 256789999999988885
No 55
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=96.18 E-value=0.18 Score=47.41 Aligned_cols=46 Identities=7% Similarity=0.058 Sum_probs=40.7
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEEcCCcchhhhhh
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENT-NRYTITFVNTPSNLKKLKS 51 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~-rGh~Vt~~~~~~~~~~v~~ 51 (473)
+||+++-....|++.=..++.+.|++. .+.+|++++.+.+.+.+..
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 47 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSW 47 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHT
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhc
Confidence 389999999999999999999999884 4999999999988887765
No 56
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=93.41 E-value=0.15 Score=49.91 Aligned_cols=80 Identities=18% Similarity=0.070 Sum_probs=54.9
Q ss_pred CCCeEEecccChHH---hhcccccceeeecc---Ch-hhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEeccc
Q 043168 328 GQGLVVQKWAPQVE---ILSHKSISAFLSHC---GW-NSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGM 400 (473)
Q Consensus 328 ~~~v~~~~~~p~~~---lL~~~~~~~~I~Hg---G~-gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~ 400 (473)
..++.+..++|+.+ +++.++ +||.-. |. .++.||+++|+|+|+- ..+ ....+... ..|+.++.
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~ad--v~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g----~~e~v~~~-~~G~lv~~-- 363 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSS--IGISLMISPHPSYPPLEMAHFGLRVITN-KYE----NKDLSNWH-SNIVSLEQ-- 363 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCC--EEECCCSSSSCCSHHHHHHHTTCEEEEE-CBT----TBCGGGTB-TTEEEESS--
T ss_pred cCcEEEcCCCCHHHHHHHHHhCC--EEEEecCCCCCCcHHHHHHhCCCcEEEe-CCC----cchhhhcC-CCEEEeCC--
Confidence 35788889998754 566666 565421 33 4679999999999982 221 11223323 46776664
Q ss_pred CCccCHHHHHHHHHHHHcCC
Q 043168 401 NCEVSKENLSAKFELVMNET 420 (473)
Q Consensus 401 ~~~~~~~~l~~ai~~~l~~~ 420 (473)
-+++.++++|.++++|+
T Consensus 364 ---~d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 364 ---LNPENIAETLVELCMSF 380 (413)
T ss_dssp ---CSHHHHHHHHHHHHHHT
T ss_pred ---CCHHHHHHHHHHHHcCH
Confidence 48999999999999988
No 57
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=91.20 E-value=1.1 Score=45.22 Aligned_cols=136 Identities=7% Similarity=-0.054 Sum_probs=72.5
Q ss_pred eEEEEecCcccC-CHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChH--
Q 043168 264 VIYVSFGSQNTI-AASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQV-- 340 (473)
Q Consensus 264 ~V~vs~GS~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-- 340 (473)
++++..|..... ..+.+...+..+.+.+.+++++ +.+. ......+.......+.++.+..+.+..
T Consensus 328 p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~-G~G~-----------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 395 (536)
T 3vue_A 328 PLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLL-GTGK-----------KKFEKLLKSMEEKYPGKVRAVVKFNAPLA 395 (536)
T ss_dssp CEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEE-CCBC-----------HHHHHHHHHHHHHSTTTEEEECSCCHHHH
T ss_pred cEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEE-eccC-----------chHHHHHHHHHhhcCCceEEEEeccHHHH
Confidence 455666776532 2333333334444456666554 4331 001122222222236677777777664
Q ss_pred -Hhhcccccceeeecc---Ch-hhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEeccc-C----CccCHHHHH
Q 043168 341 -EILSHKSISAFLSHC---GW-NSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGM-N----CEVSKENLS 410 (473)
Q Consensus 341 -~lL~~~~~~~~I~Hg---G~-gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~-~----~~~~~~~l~ 410 (473)
.+++.++ +||.-. |. .+++||+++|+|+|+... ......|... .-|....... + ...+++.++
T Consensus 396 ~~~~~~aD--~~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la 468 (536)
T 3vue_A 396 HLIMAGAD--VLAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVA 468 (536)
T ss_dssp HHHHHHCS--EEEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHH
T ss_pred HHHHHhhh--eeecccccCCCCHHHHHHHHcCCCEEEcCC----CCchheeeCC-CCccccccCCCceeEECCCCHHHHH
Confidence 3566666 566432 33 388999999999998643 3334444433 3444332200 0 123578899
Q ss_pred HHHHHHHc
Q 043168 411 AKFELVMN 418 (473)
Q Consensus 411 ~ai~~~l~ 418 (473)
++|+++|.
T Consensus 469 ~ai~ral~ 476 (536)
T 3vue_A 469 ATLKRAIK 476 (536)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988875
No 58
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=88.50 E-value=8.6 Score=32.25 Aligned_cols=79 Identities=16% Similarity=0.083 Sum_probs=44.0
Q ss_pred eEEecccCh-HHhhcccccceeeeccChhhHHH---HHhcCCCEEecccccchhhhHHHHHHHHcceEEEecccCCccCH
Q 043168 331 LVVQKWAPQ-VEILSHKSISAFLSHCGWNSVLE---ALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCEVSK 406 (473)
Q Consensus 331 v~~~~~~p~-~~lL~~~~~~~~I~HgG~gs~~e---al~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~~~~ 406 (473)
.++.++.+. ..++..-+-..++--||.||+-| ++..++|++.+|.+. .....+...---.+... -++
T Consensus 91 ~i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~~~~~i~~~------~~~ 161 (176)
T 2iz6_A 91 PIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSLDAGLVHVA------ADV 161 (176)
T ss_dssp EEECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHHCTTTEEEE------SSH
T ss_pred eEEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChhhcCeEEEc------CCH
Confidence 344455554 33443333336777899998764 577999999999832 11112221201122332 367
Q ss_pred HHHHHHHHHHHc
Q 043168 407 ENLSAKFELVMN 418 (473)
Q Consensus 407 ~~l~~ai~~~l~ 418 (473)
+++.+.+.+.+.
T Consensus 162 ~e~~~~l~~~~~ 173 (176)
T 2iz6_A 162 AGAIAAVKQLLA 173 (176)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777777776653
No 59
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=86.56 E-value=1.4 Score=39.55 Aligned_cols=39 Identities=15% Similarity=0.054 Sum_probs=27.3
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchh
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLK 47 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~ 47 (473)
+|||+.---+. +---+..|+++|.. .| +|+++.+...+.
T Consensus 2 p~ILlTNDDGi-~apGi~~L~~~l~~-~g-~V~VvAP~~~~S 40 (251)
T 2wqk_A 2 PTFLLVNDDGY-FSPGINALREALKS-LG-RVVVVAPDRNLS 40 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTT-TS-EEEEEEESSCCT
T ss_pred CEEEEEcCCCC-CcHHHHHHHHHHHh-CC-CEEEEeeCCCCc
Confidence 48887765443 33457788999999 98 588888665443
No 60
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=84.16 E-value=35 Score=33.79 Aligned_cols=113 Identities=10% Similarity=0.015 Sum_probs=71.0
Q ss_pred CeEEecccChH---Hhhcccccceeee--ccChhhH-HHHHhcC---CCEEecccccchhhhHHHHHHHHcceEEEeccc
Q 043168 330 GLVVQKWAPQV---EILSHKSISAFLS--HCGWNSV-LEALSHG---VPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGM 400 (473)
Q Consensus 330 ~v~~~~~~p~~---~lL~~~~~~~~I~--HgG~gs~-~eal~~G---vP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~ 400 (473)
.|+....+|+. .+++.+++ ++++ .=|+|.+ .|++++| .|+|+--+.+ .+..+. .-|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv-~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~---~~allVnP-- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL-LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLG---EYCRSVNP-- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE-EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG---GGSEEECT--
T ss_pred CEEEeCCCCHHHHHHHHHhccE-EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC---CCEEEECC--
Confidence 56766778874 45666775 3333 4688854 7999996 5665543332 222221 24777765
Q ss_pred CCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHhh
Q 043168 401 NCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMIIKNAVRNEEKFKGSSVKAMEQFLDAALMMK 466 (473)
Q Consensus 401 ~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~ 466 (473)
.+.+.++++|.++|+++.. +-+++.+++.+.++ ... ...-++.+++.+....
T Consensus 423 ---~D~~~lA~AI~~aL~m~~~--er~~r~~~~~~~V~--------~~d-~~~W~~~fl~~L~~~~ 474 (496)
T 3t5t_A 423 ---FDLVEQAEAISAALAAGPR--QRAEAAARRRDAAR--------PWT-LEAWVQAQLDGLAADH 474 (496)
T ss_dssp ---TBHHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHT--------TCB-HHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHH--------HCC-HHHHHHHHHHHHhhcc
Confidence 5899999999999998721 34444444444443 222 5677888888886543
No 61
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=83.56 E-value=2.7 Score=40.92 Aligned_cols=37 Identities=19% Similarity=0.247 Sum_probs=26.7
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
|..+++||++++.+-.. | .+.++.++ .|++|+++.+.
T Consensus 1 M~~~~k~l~Il~~~~~~---~--~i~~aa~~-lG~~vv~v~~~ 37 (425)
T 3vot_A 1 MTKRNKNLAIICQNKHL---P--FIFEEAER-LGLKVTFFYNS 37 (425)
T ss_dssp -CCCCCEEEEECCCTTC---C--HHHHHHHH-TTCEEEEEEET
T ss_pred CCCCCcEEEEECCChhH---H--HHHHHHHH-CCCEEEEEECC
Confidence 88888899999755332 2 35678888 99999988744
No 62
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=82.27 E-value=10 Score=32.46 Aligned_cols=39 Identities=13% Similarity=0.128 Sum_probs=34.1
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
+-.|++++..+.|-.+-.+.+|-+... +|++|.|+..-.
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g-~G~rV~~vQF~K 66 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVG-HGKNVGVVQFIK 66 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHH-CCCeEEEEEeeC
Confidence 347899999999999999999999999 999999996543
No 63
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=81.75 E-value=4.2 Score=36.24 Aligned_cols=41 Identities=15% Similarity=0.057 Sum_probs=30.2
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhh
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKL 49 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v 49 (473)
+|||+.---+. |.--+..|+++|++ .| +|+++.+...+.-.
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~-~g-~V~VVAP~~~~Sg~ 42 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKS-LG-RVVVVAPDRNLSGV 42 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTT-TS-EEEEEEESSCCTTS
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHh-cC-CEEEEecCCCccCC
Confidence 38888775554 44567889999999 88 99999976554433
No 64
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=81.57 E-value=10 Score=33.36 Aligned_cols=104 Identities=5% Similarity=-0.003 Sum_probs=61.6
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCC--CcEEEEEcCC-cch---hhhhhcCCCCCCceEEeccCCCCCCCCCCCC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTN--RYTITFVNTP-SNL---KKLKSSLPQNSSIHLREIPFDGIAHDLPPCT 77 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~r--Gh~Vt~~~~~-~~~---~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~ 77 (473)
.|+||+|+..++.. -+.++.++|.+ . +++|..+.+. ... +.... .++.+..++.. .+.
T Consensus 21 ~~~rI~~l~SG~g~---~~~~~l~~l~~-~~~~~~I~~Vvt~~~~~~~~~~A~~-----~gIp~~~~~~~----~~~--- 84 (229)
T 3auf_A 21 HMIRIGVLISGSGT---NLQAILDGCRE-GRIPGRVAVVISDRADAYGLERARR-----AGVDALHMDPA----AYP--- 84 (229)
T ss_dssp TCEEEEEEESSCCH---HHHHHHHHHHT-TSSSEEEEEEEESSTTCHHHHHHHH-----TTCEEEECCGG----GSS---
T ss_pred CCcEEEEEEeCCcH---HHHHHHHHHHh-CCCCCeEEEEEcCCCchHHHHHHHH-----cCCCEEEECcc----ccc---
Confidence 45699999777643 35667778877 5 6887665543 222 23333 44555433210 000
Q ss_pred CCCCCCCCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcc-hHHHHHHHhCCcEEEEcc
Q 043168 78 ENSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA-WSAEIAQEYGIFNALFVG 146 (473)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~-~~~~~A~~~giP~v~~~~ 146 (473)
. -....+.+.+.+++. +||+||.-.+.. ....+-..+...++-+.+
T Consensus 85 -----------~-----r~~~~~~~~~~l~~~-------~~Dliv~agy~~IL~~~~l~~~~~~~iNiHp 131 (229)
T 3auf_A 85 -----------S-----RTAFDAALAERLQAY-------GVDLVCLAGYMRLVRGPMLTAFPNRILNIHP 131 (229)
T ss_dssp -----------S-----HHHHHHHHHHHHHHT-------TCSEEEESSCCSCCCHHHHHHSTTCEEEEES
T ss_pred -----------c-----hhhccHHHHHHHHhc-------CCCEEEEcChhHhCCHHHHhhccCCEEEEcc
Confidence 0 022334567788888 999999876543 455566777777887744
No 65
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=81.46 E-value=5.6 Score=41.06 Aligned_cols=88 Identities=11% Similarity=0.118 Sum_probs=48.4
Q ss_pred HHhhcccccceeeecc---Chh-hHHHHHhcCCCEEecccccchhhhHHHHHH-------HHcceEEEecccCCccCHHH
Q 043168 340 VEILSHKSISAFLSHC---GWN-SVLEALSHGVPIIGWPLAAEQFYNSKLLEE-------VIGVCVEVARGMNCEVSKEN 408 (473)
Q Consensus 340 ~~lL~~~~~~~~I~Hg---G~g-s~~eal~~GvP~i~~P~~~DQ~~~a~~v~~-------~lG~G~~l~~~~~~~~~~~~ 408 (473)
.++++.++ +||.-. |+| +.+||+++|+|+|+.-..+ ....|.+ . +.|+.+... ...+.++
T Consensus 513 ~~~~~~ad--vfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG----~~d~V~dg~~~~~~~-~tG~lV~~r--d~~d~ee 583 (725)
T 3nb0_A 513 DEFVRGCH--LGVFPSYYEPWGYTPAECTVMGVPSITTNVSG----FGSYMEDLIETNQAK-DYGIYIVDR--RFKAPDE 583 (725)
T ss_dssp HHHHHHCS--EEECCCSSBSSCHHHHHHHHTTCCEEEETTBH----HHHHHHTTSCHHHHH-HTTEEEECC--SSSCHHH
T ss_pred HHHHhhce--EEEeccccCCCCHHHHHHHHcCCCEEEeCCCC----hhhhhhccccccCCC-CceEEEeCC--CCCCHHH
Confidence 45777766 566443 443 8889999999999865432 2222221 2 457665420 2345555
Q ss_pred HHHHHHHHH----c-CChhhHHHHHHHHHHHHH
Q 043168 409 LSAKFELVM----N-ETEKGMDLRKKASEVEMI 436 (473)
Q Consensus 409 l~~ai~~~l----~-~~~~~~~~~~~a~~~~~~ 436 (473)
+.++|.++| . +++.++.++++++++++.
T Consensus 584 ~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~ 616 (725)
T 3nb0_A 584 SVEQLVDYMEEFVKKTRRQRINQRNATEALSDL 616 (725)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 555555444 3 342344566666555543
No 66
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=80.43 E-value=7.5 Score=36.45 Aligned_cols=42 Identities=14% Similarity=0.161 Sum_probs=34.4
Q ss_pred CceEEEEc-CCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchh
Q 043168 5 KENIVMFP-LMAQGHIIPFLALALHLENTNRYTITFVNTPSNLK 47 (473)
Q Consensus 5 ~~~Il~~~-~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~ 47 (473)
+++|+|++ -|+-|-.+-...+|..|++ .|++|.++..+....
T Consensus 15 ~~~i~~~sgkGGvGKTt~a~~lA~~la~-~g~~vllid~D~~~~ 57 (334)
T 3iqw_A 15 SLRWIFVGGKGGVGKTTTSCSLAIQLAK-VRRSVLLLSTDPAHN 57 (334)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHHTT-SSSCEEEEECCSSCH
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHh-CCCcEEEEECCCCCC
Confidence 34666655 4799999999999999999 999999999775443
No 67
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=80.04 E-value=7.8 Score=33.71 Aligned_cols=109 Identities=17% Similarity=0.214 Sum_probs=61.1
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcc----hhhhhhcCCCCCCceEEeccCCCCCCCCCCC
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSN----LKKLKSSLPQNSSIHLREIPFDGIAHDLPPC 76 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~----~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~ 76 (473)
|..+++||+++..+..+.+. +|.++..+..+++|..+.+... .+..+. .|+.+..++.. .++.
T Consensus 1 ~~~~~~riavl~SG~Gsnl~---all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~-----~gIp~~~~~~~----~~~~- 67 (215)
T 3tqr_A 1 MNREPLPIVVLISGNGTNLQ---AIIGAIQKGLAIEIRAVISNRADAYGLKRAQQ-----ADIPTHIIPHE----EFPS- 67 (215)
T ss_dssp ---CCEEEEEEESSCCHHHH---HHHHHHHTTCSEEEEEEEESCTTCHHHHHHHH-----TTCCEEECCGG----GSSS-
T ss_pred CCCCCcEEEEEEeCCcHHHH---HHHHHHHcCCCCEEEEEEeCCcchHHHHHHHH-----cCCCEEEeCcc----ccCc-
Confidence 77788899988877655443 4444544302578777665321 223444 44455544310 1100
Q ss_pred CCCCCCCCCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcc-hHHHHHHHhCCcEEEEccc
Q 043168 77 TENSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA-WSAEIAQEYGIFNALFVGG 147 (473)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
-....+.+.+.+++. +||+||.-.+.. ....+-..+...++-+.++
T Consensus 68 ------------------r~~~d~~~~~~l~~~-------~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 68 ------------------RTDFESTLQKTIDHY-------DPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp ------------------HHHHHHHHHHHHHTT-------CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ------------------hhHhHHHHHHHHHhc-------CCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 012234567888888 999999876543 4455666777778877543
No 68
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=79.99 E-value=2.3 Score=34.19 Aligned_cols=38 Identities=16% Similarity=0.180 Sum_probs=34.4
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
+.||++.+.++-+|-....-++..|.. .|++|++....
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~-~G~~Vi~lG~~ 40 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTN-AGFNVVNIGVL 40 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHH-TTCEEEEEEEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHH-CCCEEEECCCC
Confidence 569999999999999999999999999 99999988743
No 69
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=79.76 E-value=2.2 Score=37.04 Aligned_cols=48 Identities=19% Similarity=0.125 Sum_probs=40.4
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhh
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
|+ .++||++...|+.|-+. ...|.+.|++ .|++|.++.++.....+..
T Consensus 1 m~-~~k~IllgvTGaiaa~k-~~~ll~~L~~-~g~eV~vv~T~~A~~fi~~ 48 (209)
T 3zqu_A 1 MS-GPERITLAMTGASGAQY-GLRLLDCLVQ-EEREVHFLISKAAQLVMAT 48 (209)
T ss_dssp CC-SCSEEEEEECSSSCHHH-HHHHHHHHHH-TTCEEEEEECHHHHHHHHH
T ss_pred CC-CCCEEEEEEECHHHHHH-HHHHHHHHHH-CCCEEEEEECccHHHHHHH
Confidence 54 45699888888888766 8899999999 9999999999988877765
No 70
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=76.13 E-value=3 Score=35.92 Aligned_cols=49 Identities=10% Similarity=-0.135 Sum_probs=38.3
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhh
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLK 50 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~ 50 (473)
|..+.+||++.-.|+.+=+.-.+.+.+.|++ +|++|.++.++.....+.
T Consensus 3 m~l~~k~I~lgiTGs~aa~~k~~~ll~~L~~-~g~eV~vv~T~~A~~~i~ 51 (201)
T 3lqk_A 3 MNFAGKHVGFGLTGSHCTYHEVLPQMERLVE-LGAKVTPFVTHTVQTTDT 51 (201)
T ss_dssp CCCTTCEEEEECCSCGGGGGGTHHHHHHHHH-TTCEEEEECSSCSCCTTC
T ss_pred CCcCCCEEEEEEEChHHHHHHHHHHHHHHhh-CCCEEEEEEChhHHHHHH
Confidence 5556679988888874444378999999999 999999999886655443
No 71
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=75.62 E-value=11 Score=32.82 Aligned_cols=102 Identities=12% Similarity=0.117 Sum_probs=58.0
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCc--EEEEEcCCc-c---hhhhhhcCCCCCCceEEeccCCCCCCCCCCCCCC
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRY--TITFVNTPS-N---LKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTEN 79 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh--~Vt~~~~~~-~---~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~~~ 79 (473)
+||+|+..++.. -+.++.++|.+ .+| +|..+.+.. . .+.... .++.+..++.. .+.
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~-~~~~~~i~~Vvs~~~~~~~~~~A~~-----~gIp~~~~~~~----~~~----- 63 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIES-GKVNASIELVISDNPKAYAIERCKK-----HNVECKVIQRK----EFP----- 63 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHT-TSSCEEEEEEEESCTTCHHHHHHHH-----HTCCEEECCGG----GSS-----
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHh-CCCCCeEEEEEeCCCChHHHHHHHH-----cCCCEEEeCcc----ccc-----
Confidence 489988766653 35677788888 887 765555332 2 223333 23344432200 000
Q ss_pred CCCCCCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcc-hHHHHHHHhCCcEEEEcc
Q 043168 80 SDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA-WSAEIAQEYGIFNALFVG 146 (473)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~-~~~~~A~~~giP~v~~~~ 146 (473)
.-....+.+.+.+++. +||+||+-.+.. ....+-..+...++-+++
T Consensus 64 --------------~r~~~~~~~~~~l~~~-------~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 110 (216)
T 2ywr_A 64 --------------SKKEFEERMALELKKK-------GVELVVLAGFMRILSHNFLKYFPNKVINIHP 110 (216)
T ss_dssp --------------SHHHHHHHHHHHHHHT-------TCCEEEESSCCSCCCHHHHTTSTTCEEEEES
T ss_pred --------------chhhhhHHHHHHHHhc-------CCCEEEEeCchhhCCHHHHhhccCCeEEEcC
Confidence 0112334567788888 999999876543 444555666667777744
No 72
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=75.36 E-value=1.8 Score=43.71 Aligned_cols=37 Identities=14% Similarity=0.199 Sum_probs=28.5
Q ss_pred CCceEEEEcC--------CCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 4 RKENIVMFPL--------MAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 4 ~~~~Il~~~~--------~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
+++||||++. |+.|++ .-.|+++|++ +||+|+++++.
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadv--v~~L~~aL~~-~G~~V~Vi~P~ 52 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDV--LGGLPPAMAA-NGHRVMVISPR 52 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHH--HHHHHHHHHT-TTCEEEEEEEC
T ss_pred CCcEEEEEEEeccchhccCcHHHH--HHHHHHHHHH-cCCeEEEEecC
Confidence 5679999973 333444 5578999999 99999999954
No 73
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=74.79 E-value=1.7 Score=42.21 Aligned_cols=40 Identities=15% Similarity=0.237 Sum_probs=30.9
Q ss_pred CCceEEEEcCC---C--ccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 4 RKENIVMFPLM---A--QGHIIPFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 4 ~~~~Il~~~~~---~--~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
+++||++++.. . .|=......+|+.|.+ +||+|++++...
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~-~GheV~Vvt~~~ 89 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDN-KKFKKRIILTDA 89 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCT-TTCEEEEEESSC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHH-cCCceEEEEecC
Confidence 56799888743 2 1434568999999999 999999999753
No 74
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=74.52 E-value=4 Score=34.26 Aligned_cols=45 Identities=11% Similarity=0.143 Sum_probs=37.0
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhh
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
++||++...|+.|=+. ...+.+.|++ +|++|.++.++...+.+..
T Consensus 5 ~k~IllgvTGs~aa~k-~~~ll~~L~~-~g~~V~vv~T~~A~~fi~~ 49 (175)
T 3qjg_A 5 GENVLICLCGSVNSIN-ISHYIIELKS-KFDEVNVIASTNGRKFING 49 (175)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHTT-TCSEEEEEECTGGGGGSCH
T ss_pred CCEEEEEEeCHHHHHH-HHHHHHHHHH-CCCEEEEEECcCHHHHhhH
Confidence 4689888878776664 8899999999 9999999999887766654
No 75
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=73.88 E-value=22 Score=30.70 Aligned_cols=104 Identities=10% Similarity=0.115 Sum_probs=60.3
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCC--CcEEEEEcCCc-c---hhhhhhcCCCCCCceEEeccCCCCCCCCCCCCC
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTN--RYTITFVNTPS-N---LKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTE 78 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~r--Gh~Vt~~~~~~-~---~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~~ 78 (473)
|+||+++..++.+- +.++.++|.+ . +|+|..+.+.. . .+.... .++.+..++.. .+.
T Consensus 3 m~ki~vl~sG~g~~---~~~~l~~l~~-~~l~~~I~~Vit~~~~~~v~~~A~~-----~gIp~~~~~~~----~~~---- 65 (212)
T 3av3_A 3 MKRLAVFASGSGTN---FQAIVDAAKR-GDLPARVALLVCDRPGAKVIERAAR-----ENVPAFVFSPK----DYP---- 65 (212)
T ss_dssp CEEEEEECCSSCHH---HHHHHHHHHT-TCCCEEEEEEEESSTTCHHHHHHHH-----TTCCEEECCGG----GSS----
T ss_pred CcEEEEEEECCcHH---HHHHHHHHHh-CCCCCeEEEEEeCCCCcHHHHHHHH-----cCCCEEEeCcc----ccc----
Confidence 35888887776442 5566778877 6 78987666442 2 222333 34444433200 000
Q ss_pred CCCCCCCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcc-hHHHHHHHhCCcEEEEccc
Q 043168 79 NSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA-WSAEIAQEYGIFNALFVGG 147 (473)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
.-....+.+.+.+++. +||+||.-.+.. ....+-..+...++-+.++
T Consensus 66 ---------------~~~~~~~~~~~~l~~~-------~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 66 ---------------SKAAFESEILRELKGR-------QIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp ---------------SHHHHHHHHHHHHHHT-------TCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred ---------------chhhhHHHHHHHHHhc-------CCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 0112334566788888 999999776543 4555667777778877543
No 76
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=72.77 E-value=16 Score=35.02 Aligned_cols=34 Identities=9% Similarity=0.008 Sum_probs=27.1
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
.++||+++..+.. .+.+++++++ .|++|+++..+
T Consensus 6 ~~~~ilI~g~g~~-----~~~~~~a~~~-~G~~~v~v~~~ 39 (403)
T 4dim_A 6 DNKRLLILGAGRG-----QLGLYKAAKE-LGIHTIAGTMP 39 (403)
T ss_dssp CCCEEEEECCCGG-----GHHHHHHHHH-HTCEEEEEECS
T ss_pred CCCEEEEECCcHh-----HHHHHHHHHH-CCCEEEEEcCC
Confidence 4568999887754 3669999999 99999999754
No 77
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=71.73 E-value=12 Score=34.53 Aligned_cols=34 Identities=6% Similarity=0.084 Sum_probs=25.0
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCC-C-cEEEEEcCC
Q 043168 3 QRKENIVMFPLMAQGHIIPFLALALHLENTN-R-YTITFVNTP 43 (473)
Q Consensus 3 ~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~r-G-h~Vt~~~~~ 43 (473)
|++++|+++..+.. .++++.|++ . | ++|..+...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~-~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVK-EFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHH-HCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHH-hcCCCEEEEEeCC
Confidence 35679999866554 478999987 5 6 888887644
No 78
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=71.72 E-value=3.8 Score=35.46 Aligned_cols=48 Identities=8% Similarity=-0.121 Sum_probs=33.1
Q ss_pred CCCCCceEEEEcCCCccCHHH-HHHHHHHHHhCCCcEEEEEcCCcchhhhh
Q 043168 1 MAQRKENIVMFPLMAQGHIIP-FLALALHLENTNRYTITFVNTPSNLKKLK 50 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P-~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~ 50 (473)
|+...+||++...|+ +...- ...+.+.|++ .|++|.++.++.....+.
T Consensus 1 m~l~~k~IllgiTGs-iaayk~~~~ll~~L~~-~g~eV~vv~T~~A~~vl~ 49 (207)
T 3mcu_A 1 MSLKGKRIGFGFTGS-HCTYEEVMPHLEKLIA-EGAEVRPVVSYTVQSTNT 49 (207)
T ss_dssp -CCTTCEEEEEECSC-GGGGTTSHHHHHHHHH-TTCEEEEEECC-------
T ss_pred CCCCCCEEEEEEECh-HHHHHHHHHHHHHHHh-CCCEEEEEEehHHHHHHH
Confidence 555667998887776 44554 8899999999 999999999887664443
No 79
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=71.67 E-value=5.8 Score=34.54 Aligned_cols=104 Identities=8% Similarity=0.053 Sum_probs=57.9
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHH-hCCCcEEEEEcCCcchh---hhhhcCCCCCCceEEeccCCCCCCCCCCCCCC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLE-NTNRYTITFVNTPSNLK---KLKSSLPQNSSIHLREIPFDGIAHDLPPCTEN 79 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~-~~rGh~Vt~~~~~~~~~---~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~~~ 79 (473)
+++||+|+..++.+.+..++ +++. . .+++|..+.+..... ..+. .++.+..++.. ..
T Consensus 11 ~~~ri~vl~SG~gsnl~all---~~~~~~-~~~eI~~Vis~~~a~~~~~A~~-----~gIp~~~~~~~----~~------ 71 (215)
T 3da8_A 11 APARLVVLASGTGSLLRSLL---DAAVGD-YPARVVAVGVDRECRAAEIAAE-----ASVPVFTVRLA----DH------ 71 (215)
T ss_dssp SSEEEEEEESSCCHHHHHHH---HHSSTT-CSEEEEEEEESSCCHHHHHHHH-----TTCCEEECCGG----GS------
T ss_pred CCcEEEEEEeCChHHHHHHH---HHHhcc-CCCeEEEEEeCCchHHHHHHHH-----cCCCEEEeCcc----cc------
Confidence 46699999877755444443 3332 3 457877666544322 3344 44455433210 00
Q ss_pred CCCCCCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCc-chHHHHHHHhCCcEEEEcc
Q 043168 80 SDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFF-AWSAEIAQEYGIFNALFVG 146 (473)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~-~~~~~~A~~~giP~v~~~~ 146 (473)
. . -....+.+.+.+++. +||+||.-.+. .....+-..+.-.++-+.+
T Consensus 72 ----~----~-----r~~~d~~~~~~l~~~-------~~Dlivlagy~~iL~~~~l~~~~~~~iNiHp 119 (215)
T 3da8_A 72 ----P----S-----RDAWDVAITAATAAH-------EPDLVVSAGFMRILGPQFLSRFYGRTLNTHP 119 (215)
T ss_dssp ----S----S-----HHHHHHHHHHHHHTT-------CCSEEEEEECCSCCCHHHHHHHTTTEEEEES
T ss_pred ----c----c-----hhhhhHHHHHHHHhh-------CCCEEEEcCchhhCCHHHHhhccCCeEEeCc
Confidence 0 0 012245567888888 99999876544 3445555666666777744
No 80
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=71.59 E-value=4.4 Score=33.48 Aligned_cols=39 Identities=13% Similarity=0.228 Sum_probs=35.4
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
++.+|++.+.++-.|-....-++..|.. .|++|++....
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~-~G~eVi~lG~~ 55 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRD-AGFEVVYTGLR 55 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHH-TTCEEECCCSB
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHH-CCCEEEECCCC
Confidence 4679999999999999999999999999 99999998753
No 81
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=70.87 E-value=3.6 Score=36.08 Aligned_cols=152 Identities=13% Similarity=0.059 Sum_probs=77.7
Q ss_pred hhccCCCCceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEe
Q 043168 255 WLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQ 334 (473)
Q Consensus 255 ~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 334 (473)
|++-. .++++.|+.|.++ ...+..|.+.|..+.++... +.+.+..... ..++...
T Consensus 26 fl~L~-gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~---------------~~~~l~~l~~--~~~i~~i 80 (223)
T 3dfz_A 26 MLDLK-GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT---------------VSAEINEWEA--KGQLRVK 80 (223)
T ss_dssp EECCT-TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS---------------CCHHHHHHHH--TTSCEEE
T ss_pred EEEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC---------------CCHHHHHHHH--cCCcEEE
Confidence 34433 4568888887665 44556666778877665432 2223332222 2233332
Q ss_pred cccChHHhhcccccceeeeccChhhHHHHHh----cCCCEEecccccchhhhHH-----HHHHHHcceEEEecccCCccC
Q 043168 335 KWAPQVEILSHKSISAFLSHCGWNSVLEALS----HGVPIIGWPLAAEQFYNSK-----LLEEVIGVCVEVARGMNCEVS 405 (473)
Q Consensus 335 ~~~p~~~lL~~~~~~~~I~HgG~gs~~eal~----~GvP~i~~P~~~DQ~~~a~-----~v~~~lG~G~~l~~~~~~~~~ 405 (473)
..--....|..++ ++|.--|.-.+.+.++ .|+|+-++ |.+..+. .+.+- ++-+.+..++....-
T Consensus 81 ~~~~~~~dL~~ad--LVIaAT~d~~~N~~I~~~ak~gi~VNvv----D~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~l 153 (223)
T 3dfz_A 81 RKKVGEEDLLNVF--FIVVATNDQAVNKFVKQHIKNDQLVNMA----SSFSDGNIQIPAQFSRG-RLSLAISTDGASPLL 153 (223)
T ss_dssp CSCCCGGGSSSCS--EEEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEET-TEEEEEECTTSCHHH
T ss_pred ECCCCHhHhCCCC--EEEECCCCHHHHHHHHHHHhCCCEEEEe----CCcccCeEEEeeEEEeC-CEEEEEECCCCCcHH
Confidence 2222234465544 7887777655554433 46665332 3332221 11112 333444442222344
Q ss_pred HHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHh
Q 043168 406 KENLSAKFELVMNETEKGMDLRKKASEVEMIIKNA 440 (473)
Q Consensus 406 ~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~~a 440 (473)
+..|++.|.+.|.. ....+-+.+.+++..+++.
T Consensus 154 a~~iR~~ie~~lp~--~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 154 TKRIKEDLSSNYDE--SYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HHHHHHHHHHHSCT--HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHccH--HHHHHHHHHHHHHHHHHHH
Confidence 56777777777743 2446778888888888754
No 82
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=70.54 E-value=18 Score=31.24 Aligned_cols=105 Identities=15% Similarity=0.114 Sum_probs=59.8
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCC--CcEEEEEcCCc-c---hhhhhhcCCCCCCceEEeccCCCCCCCCCCC
Q 043168 3 QRKENIVMFPLMAQGHIIPFLALALHLENTN--RYTITFVNTPS-N---LKKLKSSLPQNSSIHLREIPFDGIAHDLPPC 76 (473)
Q Consensus 3 ~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~r--Gh~Vt~~~~~~-~---~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~ 76 (473)
|.|+||+++..++.+- +.+|.+++.+ . .++|..+.+.. . .+..+. .|+.+..++.. .+..
T Consensus 5 m~~~ri~vl~SG~gsn---l~all~~~~~-~~l~~~I~~Visn~~~a~~l~~A~~-----~gIp~~~~~~~----~~~~- 70 (209)
T 4ds3_A 5 MKRNRVVIFISGGGSN---MEALIRAAQA-PGFPAEIVAVFSDKAEAGGLAKAEA-----AGIATQVFKRK----DFAS- 70 (209)
T ss_dssp -CCEEEEEEESSCCHH---HHHHHHHHTS-TTCSEEEEEEEESCTTCTHHHHHHH-----TTCCEEECCGG----GSSS-
T ss_pred CCCccEEEEEECCcHH---HHHHHHHHHc-CCCCcEEEEEEECCcccHHHHHHHH-----cCCCEEEeCcc----ccCC-
Confidence 3467898888776544 4455666665 4 37877766532 1 223444 44455543310 0000
Q ss_pred CCCCCCCCCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcc-hHHHHHHHhCCcEEEEcc
Q 043168 77 TENSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA-WSAEIAQEYGIFNALFVG 146 (473)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~-~~~~~A~~~giP~v~~~~ 146 (473)
-....+.+.+.+++. +||+||.-.+.. ....+-..+.-.++-+.+
T Consensus 71 ------------------r~~~d~~~~~~l~~~-------~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 116 (209)
T 4ds3_A 71 ------------------KEAHEDAILAALDVL-------KPDIICLAGYMRLLSGRFIAPYEGRILNIHP 116 (209)
T ss_dssp ------------------HHHHHHHHHHHHHHH-------CCSEEEESSCCSCCCHHHHGGGTTCEEEEES
T ss_pred ------------------HHHHHHHHHHHHHhc-------CCCEEEEeccccCcCHHHHhhccCCeEEECC
Confidence 012335667888899 999999776543 445555666666777744
No 83
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=70.30 E-value=14 Score=34.50 Aligned_cols=41 Identities=10% Similarity=-0.011 Sum_probs=26.3
Q ss_pred HHHHHHHhhhhhccCCCCCeEEEeCCCcc-hHHHHHHHhCCcEEEEccc
Q 043168 100 PHFRKLINGLIDEQNGHKPVCIIADMFFA-WSAEIAQEYGIFNALFVGG 147 (473)
Q Consensus 100 ~~l~~~l~~~~~~~~~~~pDlVI~D~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
+.+.+.+++. +||+||+-.+.. ....+-..+...++-+.++
T Consensus 89 ~~~~~~l~~~-------~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpS 130 (329)
T 2bw0_A 89 PDVVAKYQAL-------GAELNVLPFCSQFIPMEIISAPRHGSIIYHPS 130 (329)
T ss_dssp HHHHHHHHTT-------CCSEEEESSCSSCCCHHHHTCSTTCEEEEESS
T ss_pred HHHHHHHHhc-------CCCEEEEeehhhhCCHHHHhhCcCCEEEEcCC
Confidence 3455677888 999999776543 3344445555667777554
No 84
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=68.76 E-value=21 Score=30.11 Aligned_cols=37 Identities=24% Similarity=0.400 Sum_probs=30.5
Q ss_pred eEEEE-cCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 7 NIVMF-PLMAQGHIIPFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 7 ~Il~~-~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
.|.|. +-|+-|-..=...||..|.+ +|++|.++-...
T Consensus 3 vi~v~s~kgG~GKTt~a~~la~~la~-~g~~vlliD~D~ 40 (206)
T 4dzz_A 3 VISFLNPKGGSGKTTAVINIATALSR-SGYNIAVVDTDP 40 (206)
T ss_dssp EEEECCSSTTSSHHHHHHHHHHHHHH-TTCCEEEEECCT
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHH-CCCeEEEEECCC
Confidence 45555 34789999999999999999 999999998653
No 85
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=68.23 E-value=8.6 Score=35.74 Aligned_cols=36 Identities=17% Similarity=-0.007 Sum_probs=25.6
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcc
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSN 45 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~ 45 (473)
+++||+|+..+..+ +...++|.+ +||+|..+.+...
T Consensus 6 ~~mrivf~Gt~~fa-----~~~L~~L~~-~~~~v~~Vvt~pd 41 (318)
T 3q0i_A 6 QSLRIVFAGTPDFA-----ARHLAALLS-SEHEIIAVYTQPE 41 (318)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHT-SSSEEEEEECCCC
T ss_pred cCCEEEEEecCHHH-----HHHHHHHHH-CCCcEEEEEcCCC
Confidence 46799999876433 345678888 9999887776543
No 86
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=67.62 E-value=26 Score=32.42 Aligned_cols=34 Identities=12% Similarity=-0.117 Sum_probs=24.5
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
.++||+|+..+..+ ....++|.+ .||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~-~~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLS-SGHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHH-TTCEEEEEECC
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHH-CCCcEEEEEeC
Confidence 56799999876433 345578888 89998766654
No 87
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=67.43 E-value=35 Score=29.47 Aligned_cols=101 Identities=15% Similarity=0.128 Sum_probs=59.6
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCC--CcEEEEEcCCc----chhhhhhcCCCCCCceEEeccCCCCCCCCCCCCCCC
Q 043168 7 NIVMFPLMAQGHIIPFLALALHLENTN--RYTITFVNTPS----NLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENS 80 (473)
Q Consensus 7 ~Il~~~~~~~GHv~P~l~LA~~L~~~r--Gh~Vt~~~~~~----~~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~~~~ 80 (473)
||+++..+..+ -+.+|.+++.+ . +|+|..+.+.. ..+.... .++.+..++.. .+.
T Consensus 2 ri~vl~Sg~gs---nl~ali~~~~~-~~~~~~i~~Vis~~~~~~~~~~A~~-----~gIp~~~~~~~----~~~------ 62 (212)
T 1jkx_A 2 NIVVLISGNGS---NLQAIIDACKT-NKIKGTVRAVFSNKADAFGLERARQ-----AGIATHTLIAS----AFD------ 62 (212)
T ss_dssp EEEEEESSCCH---HHHHHHHHHHT-TSSSSEEEEEEESCTTCHHHHHHHH-----TTCEEEECCGG----GCS------
T ss_pred EEEEEEECCcH---HHHHHHHHHHc-CCCCceEEEEEeCCCchHHHHHHHH-----cCCcEEEeCcc----ccc------
Confidence 78887776654 35667777777 4 68876665443 2223334 44555543200 000
Q ss_pred CCCCCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcc-hHHHHHHHhCCcEEEEcc
Q 043168 81 DSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA-WSAEIAQEYGIFNALFVG 146 (473)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~-~~~~~A~~~giP~v~~~~ 146 (473)
.-....+.+.+.+++. +||+||.-.+.. ....+-..+...++-+.+
T Consensus 63 -------------~r~~~~~~~~~~l~~~-------~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 109 (212)
T 1jkx_A 63 -------------SREAYDRELIHEIDMY-------APDVVVLAGFMRILSPAFVSHYAGRLLNIHP 109 (212)
T ss_dssp -------------SHHHHHHHHHHHHGGG-------CCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred -------------chhhccHHHHHHHHhc-------CCCEEEEeChhhhCCHHHHhhccCCEEEEcc
Confidence 0012334567888888 999999876543 455566777777887754
No 88
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=67.28 E-value=7.6 Score=33.04 Aligned_cols=44 Identities=23% Similarity=0.201 Sum_probs=38.1
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhh
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
+||++...|+.|-+ -...+.+.|++ +|++|.++.++.....+..
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~-~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEE-LDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHH-TTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHH-CCCEEEEEEChhHHHHhhH
Confidence 48999888888854 67899999999 9999999999988877775
No 89
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=67.15 E-value=8.1 Score=33.38 Aligned_cols=43 Identities=21% Similarity=0.138 Sum_probs=37.2
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhh
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKK 48 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~ 48 (473)
+.+|++.+.++-.|-....-++..|.. +|++|.++......+.
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~-~G~~v~~LG~~vp~~~ 130 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLES-GGFTVYNLGVDIEPGK 130 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHH-TTCEEEECCSSBCHHH
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHH-CCCEEEECCCCCCHHH
Confidence 558999999999999999999999999 9999999886543333
No 90
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=66.51 E-value=6 Score=33.39 Aligned_cols=44 Identities=9% Similarity=0.160 Sum_probs=36.4
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhh
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
+||++...|+.|=+ -...+.+.|++ +|++|.++.++...+.+..
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~-~g~~V~vv~T~~A~~fi~~ 46 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQ-HFDEVNILFSPSSKNFINT 46 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTT-TSSCEEEEECGGGGGTSCG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHH-CCCEEEEEEchhHHHHHHH
Confidence 48888887877666 67899999999 9999999999887766654
No 91
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=65.09 E-value=32 Score=33.92 Aligned_cols=107 Identities=12% Similarity=0.086 Sum_probs=64.2
Q ss_pred EecccChHH---hhcccccceeee---ccChh-hHHHHHhcCC-----CEEecccccchhhhHHHHHHHHcceEEEeccc
Q 043168 333 VQKWAPQVE---ILSHKSISAFLS---HCGWN-SVLEALSHGV-----PIIGWPLAAEQFYNSKLLEEVIGVCVEVARGM 400 (473)
Q Consensus 333 ~~~~~p~~~---lL~~~~~~~~I~---HgG~g-s~~eal~~Gv-----P~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~ 400 (473)
+..++++.+ +++.+++ ||. .=|+| ++.||+++|+ |+|+--+.+--.. + .-|+.+++
T Consensus 336 ~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~----l----~~g~lv~p-- 403 (482)
T 1uqt_A 336 LNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE----L----TSALIVNP-- 403 (482)
T ss_dssp ECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT----C----TTSEEECT--
T ss_pred eCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH----h----CCeEEECC--
Confidence 457788754 5666664 543 34665 6789999998 6666543321111 1 23556654
Q ss_pred CCccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHh
Q 043168 401 NCEVSKENLSAKFELVMNETEKGMDLRKKASEVEMIIKNAVRNEEKFKGSSVKAMEQFLDAALMM 465 (473)
Q Consensus 401 ~~~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~ 465 (473)
.+.+.++++|.++|+++.. ..+++.++..+.+++ . +....++++++.+...
T Consensus 404 ---~d~~~lA~ai~~lL~~~~~--~r~~~~~~~~~~v~~--------~-s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 404 ---YDRDEVAAALDRALTMSLA--ERISRHAEMLDVIVK--------N-DINHWQECFISDLKQI 454 (482)
T ss_dssp ---TCHHHHHHHHHHHHTCCHH--HHHHHHHHHHHHHHH--------T-CHHHHHHHHHHHHHHS
T ss_pred ---CCHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHHh--------C-CHHHHHHHHHHHHHhc
Confidence 5889999999999987511 123333333333331 2 3567777888777654
No 92
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=64.75 E-value=12 Score=32.65 Aligned_cols=108 Identities=13% Similarity=0.124 Sum_probs=61.8
Q ss_pred CceEEEEcCCCccCHHH----HHHHHHHHHhCCCcEEEEEc--CC--cchhhhhhcCCCCCCceEEeccCCCCCCCCCCC
Q 043168 5 KENIVMFPLMAQGHIIP----FLALALHLENTNRYTITFVN--TP--SNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPC 76 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P----~l~LA~~L~~~rGh~Vt~~~--~~--~~~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~ 76 (473)
+..|+++.---.|.++| ++..|++|++..|-+|+.++ +. ...+.+..+|. . +.+-+..+ .+..
T Consensus 3 m~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~~Ga--d--~v~~v~~~----~~~~- 73 (217)
T 3ih5_A 3 ANNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILPYGV--D--KLHVFDAE----GLYP- 73 (217)
T ss_dssp CCCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGGGTC--S--EEEEEECG----GGSS-
T ss_pred cccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHhcCC--C--EEEEecCc----cccc-
Confidence 34788888766676655 46667888652365655544 22 12233333443 1 22222210 1100
Q ss_pred CCCCCCCCCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcc---hHHHHHHHhCCcEEEE
Q 043168 77 TENSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA---WSAEIAQEYGIFNALF 144 (473)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~---~~~~~A~~~giP~v~~ 144 (473)
+ ........+.++++.. +||+|++..... .+..+|..+++|++.-
T Consensus 74 -----------~-----~~~~~a~~l~~~i~~~-------~p~~Vl~g~t~~G~~laprlAa~L~~~~~sd 121 (217)
T 3ih5_A 74 -----------Y-----TSLPHTSILVNLFKEE-------QPQICLMGATVIGRDLGPRVSSALTSGLTAD 121 (217)
T ss_dssp -----------C-----CHHHHHHHHHHHHHHH-------CCSEEEEECSHHHHHHHHHHHHHTTCCCBCS
T ss_pred -----------C-----CHHHHHHHHHHHHHhc-------CCCEEEEeCCcchhhHHHHHHHHhCCCccce
Confidence 0 0123445567778888 899999988655 3567999999998864
No 93
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=64.59 E-value=13 Score=35.09 Aligned_cols=41 Identities=10% Similarity=0.080 Sum_probs=34.1
Q ss_pred CceEEEEc-CCCccCHHHHHHHHHHHH--hCCCcEEEEEcCCcch
Q 043168 5 KENIVMFP-LMAQGHIIPFLALALHLE--NTNRYTITFVNTPSNL 46 (473)
Q Consensus 5 ~~~Il~~~-~~~~GHv~P~l~LA~~L~--~~rGh~Vt~~~~~~~~ 46 (473)
..+|+|++ -|+-|-.+-...||..|+ + .|++|.++......
T Consensus 17 ~~~i~~~~gkGGvGKTt~a~~lA~~la~~~-~g~~vllid~D~~~ 60 (348)
T 3io3_A 17 SLKWIFVGGKGGVGKTTTSSSVAVQLALAQ-PNEQFLLISTDPAH 60 (348)
T ss_dssp TCSEEEEECSTTSSHHHHHHHHHHHHHHHC-TTSCEEEEECCSSC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHhc-CCCeEEEEECCCCC
Confidence 34676665 479999999999999999 9 99999999987543
No 94
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=63.48 E-value=12 Score=33.25 Aligned_cols=42 Identities=14% Similarity=0.108 Sum_probs=29.1
Q ss_pred CCCCCceEEEEcCCCc----------cC-HHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 1 MAQRKENIVMFPLMAQ----------GH-IIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~----------GH-v~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
|++.|+||+++..... |- ..=++.--..|++ .|++|+++++.
T Consensus 5 m~~~mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~-aG~~V~~aSp~ 57 (247)
T 3n7t_A 5 MAPLPRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTA-AGFEVDVASET 57 (247)
T ss_dssp --CCCSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHH-TTCEEEEEESS
T ss_pred ccccCCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHH-CCCEEEEEeCC
Confidence 4444579988876642 21 4446677799999 99999999954
No 95
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=63.34 E-value=41 Score=29.07 Aligned_cols=100 Identities=10% Similarity=0.036 Sum_probs=59.2
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCC--CcEEEEEcCCc-c---hhhhhhcCCCCCCceEEeccCCCCCCCCCCCC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTN--RYTITFVNTPS-N---LKKLKSSLPQNSSIHLREIPFDGIAHDLPPCT 77 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~r--Gh~Vt~~~~~~-~---~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~ 77 (473)
+|+||+++..++.+- +.+|.+++.+ . +++|..+.+.. . .+..+. .++.+..++.. .
T Consensus 7 ~~~ri~vl~SG~gsn---l~all~~~~~-~~~~~~I~~Vis~~~~a~~l~~A~~-----~gIp~~~~~~~----~----- 68 (215)
T 3kcq_A 7 KELRVGVLISGRGSN---LEALAKAFST-EESSVVISCVISNNAEARGLLIAQS-----YGIPTFVVKRK----P----- 68 (215)
T ss_dssp CCEEEEEEESSCCHH---HHHHHHHTCC-C-CSEEEEEEEESCTTCTHHHHHHH-----TTCCEEECCBT----T-----
T ss_pred CCCEEEEEEECCcHH---HHHHHHHHHc-CCCCcEEEEEEeCCcchHHHHHHHH-----cCCCEEEeCcc----c-----
Confidence 466898887766443 4556666655 4 37877766532 2 223444 34455443310 0
Q ss_pred CCCCCCCCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcc-hHHHHHHHhCCcEEEEccc
Q 043168 78 ENSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA-WSAEIAQEYGIFNALFVGG 147 (473)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
+. .+.+.+.+++. +||+||.-.+.. ....+-..+.-.++-+.++
T Consensus 69 ----------~~---------~~~~~~~L~~~-------~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 69 ----------LD---------IEHISTVLREH-------DVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp ----------BC---------HHHHHHHHHHT-------TCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ----------CC---------hHHHHHHHHHh-------CCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 00 05667888888 999999776543 4555666777778877543
No 96
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=62.07 E-value=9.8 Score=34.13 Aligned_cols=38 Identities=18% Similarity=0.124 Sum_probs=35.0
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
.+.+|++.+.++-.|-....-++..|.. +|++|++++.
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~-~G~~Vi~LG~ 159 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRA-NGYNVVDLGR 159 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHH-TTCEEEEEEE
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHH-CCCEEEECCC
Confidence 4569999999999999999999999999 9999998874
No 97
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=60.63 E-value=9.1 Score=32.76 Aligned_cols=43 Identities=14% Similarity=0.045 Sum_probs=36.8
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCC-CcEEEEEcCCcchhhhhh
Q 043168 7 NIVMFPLMAQGHIIPFLALALHLENTN-RYTITFVNTPSNLKKLKS 51 (473)
Q Consensus 7 ~Il~~~~~~~GHv~P~l~LA~~L~~~r-Gh~Vt~~~~~~~~~~v~~ 51 (473)
||++...|+.|-+. ...+.+.|++ + |++|.++.++.....+..
T Consensus 2 ~IllgvTGsiaa~k-~~~ll~~L~~-~~g~~V~vv~T~~A~~fi~~ 45 (197)
T 1sbz_A 2 KLIVGMTGATGAPL-GVALLQALRE-MPNVETHLVMSKWAKTTIEL 45 (197)
T ss_dssp EEEEEECSSSCHHH-HHHHHHHHHT-CTTCEEEEEECHHHHHHHHH
T ss_pred EEEEEEeChHHHHH-HHHHHHHHHh-ccCCEEEEEECchHHHHhHH
Confidence 78888878877655 8999999999 9 999999999988877764
No 98
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=60.23 E-value=7.1 Score=36.22 Aligned_cols=36 Identities=14% Similarity=-0.034 Sum_probs=26.1
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcch
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNL 46 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~ 46 (473)
++||+|+..|..+- ...++|.+ .||+|..+.+....
T Consensus 2 ~mrivf~Gtp~fa~-----~~L~~L~~-~~~~v~~Vvt~pd~ 37 (314)
T 3tqq_A 2 SLKIVFAGTPQFAV-----PTLRALID-SSHRVLAVYTQPDR 37 (314)
T ss_dssp CCEEEEEECSGGGH-----HHHHHHHH-SSSEEEEEECCCC-
T ss_pred CcEEEEECCCHHHH-----HHHHHHHH-CCCeEEEEEeCCCC
Confidence 45999999886653 44578888 89998877765443
No 99
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=60.03 E-value=5.8 Score=37.84 Aligned_cols=35 Identities=14% Similarity=0.015 Sum_probs=30.9
Q ss_pred eEEEEcC-CCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 7 NIVMFPL-MAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 7 ~Il~~~~-~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
+|++++. ++-|-..-...+|..|++ +|++|.++..
T Consensus 3 ~i~~~~gkGG~GKTt~a~~la~~la~-~g~~vllvd~ 38 (374)
T 3igf_A 3 LILTFLGKSGVARTKIAIAAAKLLAS-QGKRVLLAGL 38 (374)
T ss_dssp EEEEEECSBHHHHHHHHHHHHHHHHH-TTCCEEEEEC
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHH-CCCCeEEEeC
Confidence 7766654 789999999999999999 9999999998
No 100
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=60.02 E-value=58 Score=30.68 Aligned_cols=38 Identities=5% Similarity=-0.019 Sum_probs=28.2
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
|..++++|+++..+ .-...+++++++ .||+|..+....
T Consensus 7 m~~~~~~ili~g~g-----~~~~~~~~a~~~-~G~~v~~~~~~~ 44 (391)
T 1kjq_A 7 LRPAATRVMLLGSG-----ELGKEVAIECQR-LGVEVIAVDRYA 44 (391)
T ss_dssp TSTTCCEEEEESCS-----HHHHHHHHHHHT-TTCEEEEEESST
T ss_pred CCCCCCEEEEECCC-----HHHHHHHHHHHH-cCCEEEEEECCC
Confidence 55566799998553 134678999999 999998887543
No 101
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=58.99 E-value=76 Score=29.23 Aligned_cols=36 Identities=14% Similarity=0.094 Sum_probs=26.4
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcc
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSN 45 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~ 45 (473)
.|+||+|+..|..+- ..-++|.+ .||+|..+.+...
T Consensus 3 ~mmrIvf~Gtp~fa~-----~~L~~L~~-~~~~v~~Vvt~pd 38 (317)
T 3rfo_A 3 AMIKVVFMGTPDFSV-----PVLRRLIE-DGYDVIGVVTQPD 38 (317)
T ss_dssp TTSEEEEECCSTTHH-----HHHHHHHH-TTCEEEEEECCCC
T ss_pred CceEEEEEeCCHHHH-----HHHHHHHH-CCCcEEEEEeCCC
Confidence 356999999886543 44577888 8999887776543
No 102
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=58.79 E-value=80 Score=27.74 Aligned_cols=35 Identities=9% Similarity=0.039 Sum_probs=28.3
Q ss_pred ceEEEEcC--CCccCHHHHHHHHHHHHhCCCcEEEEEc
Q 043168 6 ENIVMFPL--MAQGHIIPFLALALHLENTNRYTITFVN 41 (473)
Q Consensus 6 ~~Il~~~~--~~~GHv~P~l~LA~~L~~~rGh~Vt~~~ 41 (473)
.+.+|++. ..-|-..-.+.|++.|++ +|++|.++=
T Consensus 21 ~k~i~ItgT~t~vGKT~vs~gL~~~L~~-~G~~V~~fK 57 (242)
T 3qxc_A 21 GHMLFISATNTNAGKTTCARLLAQYCNA-CGVKTILLK 57 (242)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHHH-TTCCEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHh-CCCceEEEe
Confidence 35555443 478888999999999999 999999985
No 103
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=58.55 E-value=15 Score=36.00 Aligned_cols=43 Identities=12% Similarity=0.047 Sum_probs=35.8
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhh
Q 043168 7 NIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLK 50 (473)
Q Consensus 7 ~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~ 50 (473)
=+++...|+.|-..=.+.+|..... .|..|.|++.+.....+.
T Consensus 199 liiIaG~pG~GKTtlal~ia~~~a~-~g~~vl~fSlEms~~ql~ 241 (444)
T 3bgw_A 199 FVLIAARPSMGKTAFALKQAKNMSD-NDDVVNLHSLEMGKKENI 241 (444)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHH-TTCEEEEECSSSCTTHHH
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHH-cCCEEEEEECCCCHHHHH
Confidence 3677778999999999999999999 899999999876554443
No 104
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=58.47 E-value=77 Score=26.11 Aligned_cols=143 Identities=18% Similarity=0.188 Sum_probs=79.6
Q ss_pred CceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChHH
Q 043168 262 NSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVE 341 (473)
Q Consensus 262 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 341 (473)
+|.|-|-+||.. +....+++...|+..|+++-+-+.+.+ ..|+.+.+-.+ +.
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaH------------R~p~~l~~~~~-------------~a- 62 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAH------------RTPDYMFEYAE-------------TA- 62 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT------------TSHHHHHHHHH-------------HT-
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEecc------------CCHHHHHHHHH-------------HH-
Confidence 567888888886 677888889999998888766555442 14444322111 00
Q ss_pred hhcccccceeeeccChh----hHHHHHhcCCCEEecccccchh---hhHHHHHH--HHcceE-EEecccCCccCHHHHHH
Q 043168 342 ILSHKSISAFLSHCGWN----SVLEALSHGVPIIGWPLAAEQF---YNSKLLEE--VIGVCV-EVARGMNCEVSKENLSA 411 (473)
Q Consensus 342 lL~~~~~~~~I~HgG~g----s~~eal~~GvP~i~~P~~~DQ~---~~a~~v~~--~lG~G~-~l~~~~~~~~~~~~l~~ 411 (473)
..-.++.+|.=+|.- ++..+ ..-.|+|.+|...... +---.+.. . |+.+ .+..++....++.-++.
T Consensus 63 --~~~g~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAa 138 (170)
T 1xmp_A 63 --RERGLKVIIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAA 138 (170)
T ss_dssp --TTTTCCEEEEEEESSCCHHHHHHT-TCCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHH
T ss_pred --HhCCCcEEEEECCchhhhHHHHHh-ccCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHH
Confidence 000123455544432 33333 3578999999864211 11122232 2 4432 12221112345666665
Q ss_pred HHHHHHcCChhhHHHHHHHHHHHHHHHHhh
Q 043168 412 KFELVMNETEKGMDLRKKASEVEMIIKNAV 441 (473)
Q Consensus 412 ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~ 441 (473)
.|- -+.|+ .++++.+.+++.+++.+
T Consensus 139 qIl-a~~d~----~l~~kl~~~r~~~~~~v 163 (170)
T 1xmp_A 139 QIL-GSFHD----DIHDALELRREAIEKDV 163 (170)
T ss_dssp HHH-HTTCH----HHHHHHHHHHHHHHHHH
T ss_pred HHH-ccCCH----HHHHHHHHHHHHHHHHH
Confidence 554 45677 79999998888887554
No 105
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=58.44 E-value=13 Score=36.24 Aligned_cols=43 Identities=12% Similarity=0.026 Sum_probs=33.4
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhh
Q 043168 8 IVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLK 50 (473)
Q Consensus 8 Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~ 50 (473)
+++...|+.|-..=++.+|.......|..|.|++.+.....+.
T Consensus 203 ~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~l~ 245 (444)
T 2q6t_A 203 NIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQLT 245 (444)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHHHH
Confidence 5677778999999999999887751488999999876554443
No 106
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=58.22 E-value=22 Score=31.02 Aligned_cols=67 Identities=10% Similarity=0.142 Sum_probs=46.1
Q ss_pred cceeeeccChhhHHHHHhcCCCEEeccccc-----------------------chhhhHHHHHHHHcceEEEecccCCcc
Q 043168 348 ISAFLSHCGWNSVLEALSHGVPIIGWPLAA-----------------------EQFYNSKLLEEVIGVCVEVARGMNCEV 404 (473)
Q Consensus 348 ~~~~I~HgG~gs~~eal~~GvP~i~~P~~~-----------------------DQ~~~a~~v~~~lG~G~~l~~~~~~~~ 404 (473)
++.+|+.||........ ..+|+|-++..+ .....++.+.+.||+-+.... --
T Consensus 64 ~dVIISRGgta~~Lr~~-~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~----~~ 138 (225)
T 2pju_A 64 CDAIIAAGSNGAYLKSR-LSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRS----YI 138 (225)
T ss_dssp CSEEEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEE----ES
T ss_pred CeEEEeCChHHHHHHhh-CCCCEEEecCCHHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEEEE----eC
Confidence 56899999999999875 689999999742 233344555555566555442 34
Q ss_pred CHHHHHHHHHHHHcC
Q 043168 405 SKENLSAKFELVMNE 419 (473)
Q Consensus 405 ~~~~l~~ai~~~l~~ 419 (473)
+.+++...|.++..+
T Consensus 139 ~~ee~~~~i~~l~~~ 153 (225)
T 2pju_A 139 TEEDARGQINELKAN 153 (225)
T ss_dssp SHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHC
Confidence 667777777777654
No 107
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=57.82 E-value=20 Score=32.43 Aligned_cols=40 Identities=13% Similarity=-0.062 Sum_probs=27.9
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhh
Q 043168 7 NIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKL 49 (473)
Q Consensus 7 ~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v 49 (473)
|||+.---+. +.--+..|+++|++ .| +|+++.+...+.-.
T Consensus 2 ~ILlTNDDGi-~ApGi~aL~~aL~~-~g-~V~VVAP~~~qSg~ 41 (280)
T 1l5x_A 2 KILVTNDDGV-HSPGLRLLYQFALS-LG-DVDVVAPESPKSAT 41 (280)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHGG-GS-EEEEEEESSCTTTS
T ss_pred eEEEEcCCCC-CcHhHHHHHHHHHh-CC-CEEEEecCCCCcCC
Confidence 6666654443 33457789999999 88 89999977654433
No 108
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=57.59 E-value=14 Score=32.06 Aligned_cols=43 Identities=14% Similarity=0.034 Sum_probs=37.2
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhh
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKK 48 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~ 48 (473)
+.||++.+.++-.|-....-++..|.. +|++|+++...-..+.
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~-~G~~Vi~LG~~vp~e~ 134 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGA-NGFQIVDLGVDVLNEN 134 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHH-TSCEEEECCSSCCHHH
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHH-CCCeEEEcCCCCCHHH
Confidence 469999999999999999999999999 9999999986443333
No 109
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=57.18 E-value=7.9 Score=31.30 Aligned_cols=34 Identities=15% Similarity=0.267 Sum_probs=26.4
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
++.||+++..+..| ..+++.|.+ .||+|+++...
T Consensus 2 ~~~~vlI~G~G~vG-----~~la~~L~~-~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILA-----INTILQLNQ-RGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHH-----HHHHHHHHH-TTCCEEEEECC
T ss_pred CCCcEEEECCCHHH-----HHHHHHHHH-CCCCEEEEECC
Confidence 35689888644333 678999999 99999999864
No 110
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=56.90 E-value=15 Score=31.78 Aligned_cols=44 Identities=20% Similarity=0.147 Sum_probs=37.1
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhh
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
++||++...|+.+-+. ...|.+.|++ .| +|.++.++.....+..
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~-~g-~V~vv~T~~A~~fv~~ 62 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTE-WA-EVRAVVTKSSLHFLDK 62 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHT-TS-EEEEEECTGGGGTCCG
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhc-CC-CEEEEEcchHHHhcCH
Confidence 5689998888888765 8999999999 99 9999999887766654
No 111
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=56.40 E-value=17 Score=30.96 Aligned_cols=69 Identities=14% Similarity=0.244 Sum_probs=44.3
Q ss_pred cccceeeeccChhhHHHHHhcCCCEEeccccc-c----------------------hhhhHHHHHHHHcceEEEecccCC
Q 043168 346 KSISAFLSHCGWNSVLEALSHGVPIIGWPLAA-E----------------------QFYNSKLLEEVIGVCVEVARGMNC 402 (473)
Q Consensus 346 ~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~-D----------------------Q~~~a~~v~~~lG~G~~l~~~~~~ 402 (473)
..++.+|+.||........ ..+|+|-+|..+ | ....++.+.+.||+-+....
T Consensus 50 ~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~i~~~~---- 124 (196)
T 2q5c_A 50 DEVDAIISRGATSDYIKKS-VSIPSISIKVTRFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVKIKEFL---- 124 (196)
T ss_dssp TTCSEEEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCEEEEEE----
T ss_pred CCCeEEEECChHHHHHHHh-CCCCEEEEcCCHhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCceEEEE----
Confidence 4466899999999999875 689999999743 2 33334444444454444432
Q ss_pred ccCHHHHHHHHHHHHcC
Q 043168 403 EVSKENLSAKFELVMNE 419 (473)
Q Consensus 403 ~~~~~~l~~ai~~~l~~ 419 (473)
--+.+++...+.++..+
T Consensus 125 ~~~~~e~~~~i~~l~~~ 141 (196)
T 2q5c_A 125 FSSEDEITTLISKVKTE 141 (196)
T ss_dssp ECSGGGHHHHHHHHHHT
T ss_pred eCCHHHHHHHHHHHHHC
Confidence 24556666666666544
No 112
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=56.38 E-value=14 Score=29.72 Aligned_cols=45 Identities=11% Similarity=0.185 Sum_probs=34.1
Q ss_pred EEEEcCCCccCHH-HHHHHHHHHHhCCCcEEEEEcCCcchhhhhhcC
Q 043168 8 IVMFPLMAQGHII-PFLALALHLENTNRYTITFVNTPSNLKKLKSSL 53 (473)
Q Consensus 8 Il~~~~~~~GHv~-P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~~~ 53 (473)
++++..|-.-=.. -.+=++..|+. +||+|++++++...++++-+.
T Consensus 10 LilLGCPE~Pvq~p~~lYl~~~Lk~-~G~~v~VA~npAAlkLlevaD 55 (157)
T 1kjn_A 10 LMVLGCPESPVQIPLAIYTSHKLKK-KGFRVTVTANPAALRLVQVAD 55 (157)
T ss_dssp EEECCCSCSTTHHHHHHHHHHHHHH-TTCEEEEEECHHHHHHHHHHS
T ss_pred eEEecCCCCcchhhHHHHHHHHHHh-cCCeeEEecCHHHHhheeccC
Confidence 3555566444444 46778999999 999999999999998887643
No 113
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=54.75 E-value=92 Score=26.37 Aligned_cols=97 Identities=12% Similarity=0.022 Sum_probs=52.6
Q ss_pred hhhhhhhccCCCCceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCC
Q 043168 250 ESCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQ 329 (473)
Q Consensus 250 ~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (473)
.++-.+|.+.. ...|+.|..+ .+....++..+.+..+|-+++... . ... ..
T Consensus 48 ~~lg~~LA~~G---~~vVsGg~~G-----iM~aa~~gAl~~GG~~iGVlP~e~-----------~-~~~---------~~ 98 (195)
T 1rcu_A 48 LELGRTLAKKG---YLVFNGGRDG-----VMELVSQGVREAGGTVVGILPDEE-----------A-GNP---------YL 98 (195)
T ss_dssp HHHHHHHHHTT---CEEEECCSSH-----HHHHHHHHHHHTTCCEEEEESTTC-----------C-CCT---------TC
T ss_pred HHHHHHHHHCC---CEEEeCCHHH-----HHHHHHHHHHHcCCcEEEEeCCcc-----------c-CCC---------Cc
Confidence 34555666542 4556544333 445555555555666766664321 0 100 12
Q ss_pred CeEEe--cccC-hHHhhcccccceeeeccChhhHHH---HHhcCCCEEeccc
Q 043168 330 GLVVQ--KWAP-QVEILSHKSISAFLSHCGWNSVLE---ALSHGVPIIGWPL 375 (473)
Q Consensus 330 ~v~~~--~~~p-~~~lL~~~~~~~~I~HgG~gs~~e---al~~GvP~i~~P~ 375 (473)
.+.+. ...+ -..++..-+-..++--||.||+-| ++.+++|+++++.
T Consensus 99 ~~~~~~~~~f~~Rk~~m~~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 99 SVAVKTGLDFQMRSFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp SEEEECCCCHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred ceeeecCCCHHHHHHHHHHhCCEEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 23332 2334 244444333346778899998765 5779999999963
No 114
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=54.16 E-value=8.2 Score=32.97 Aligned_cols=45 Identities=9% Similarity=-0.012 Sum_probs=36.9
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhh
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
++||++...|+.|=+. ...+.+.|++ +|++|.++.++.....+..
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~-~g~~V~vv~T~~A~~fi~~ 52 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKS-FFKEIRVVMTKTAEDLIPA 52 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTT-TSSEEEEEECHHHHHHSCH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHH-CCCEEEEEEchhHHHHHHH
Confidence 4689888888877764 7899999999 9999999998877766544
No 115
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=53.76 E-value=38 Score=32.81 Aligned_cols=34 Identities=9% Similarity=-0.053 Sum_probs=25.0
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
+++||+++..+ . -.+.+++++++ .|++|+.+.+.
T Consensus 5 ~~~kiLI~g~g---~--~a~~i~~aa~~-~G~~~v~v~~~ 38 (446)
T 3ouz_A 5 EIKSILIANRG---E--IALRALRTIKE-MGKKAICVYSE 38 (446)
T ss_dssp CCCEEEECCCH---H--HHHHHHHHHHH-TTCEEEEEEEG
T ss_pred ccceEEEECCC---H--HHHHHHHHHHH-cCCEEEEEEcC
Confidence 45688886432 2 45789999999 99998888643
No 116
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=52.99 E-value=6 Score=36.44 Aligned_cols=37 Identities=19% Similarity=0.242 Sum_probs=27.9
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCC-----C-cEEEEEcCC
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTN-----R-YTITFVNTP 43 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~r-----G-h~Vt~~~~~ 43 (473)
|..+++||.|+..|..|. .+|..|.+ . | |+|+++..+
T Consensus 4 m~~~~m~I~iiG~G~mG~-----~~a~~L~~-~~~~~~g~~~V~~~~r~ 46 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGG-----YYGAMLAL-RAAATDGLLEVSWIARG 46 (317)
T ss_dssp ---CCEEEEEECCSHHHH-----HHHHHHHH-HHHHTTSSEEEEEECCH
T ss_pred CCCCCCEEEEECcCHHHH-----HHHHHHHh-CccccCCCCCEEEEEcH
Confidence 666667999999888885 56788888 8 9 999999763
No 117
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=52.84 E-value=95 Score=26.58 Aligned_cols=103 Identities=12% Similarity=0.073 Sum_probs=56.6
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEEcCCcch----hhhhhcCCCCCCceEEeccCCCCCCCCCCCCCCC
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENT-NRYTITFVNTPSNL----KKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENS 80 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~-rGh~Vt~~~~~~~~----~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~~~~ 80 (473)
+||+++..+..+.+ -+|.+.+.+. .+|+|..+.+.... +.... .++.+..++.. .+.
T Consensus 1 ~riaVl~SG~Gs~L---~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~-----~gIp~~~~~~~----~~~------ 62 (209)
T 1meo_A 1 ARVAVLISGTGSNL---QALIDSTREPNSSAQIDIVISNKAAVAGLDKAER-----AGIPTRVINHK----LYK------ 62 (209)
T ss_dssp CEEEEEESSSCTTH---HHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHH-----TTCCEEECCGG----GSS------
T ss_pred CeEEEEEECCchHH---HHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHH-----cCCCEEEECcc----ccC------
Confidence 37888777666543 3445566551 27898777644322 22333 34444432200 000
Q ss_pred CCCCCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCc-chHHHHHHHhCCcEEEEcc
Q 043168 81 DSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFF-AWSAEIAQEYGIFNALFVG 146 (473)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~-~~~~~~A~~~giP~v~~~~ 146 (473)
.-....+.+.+.+++. +||+||+-.+. .....+-..+...++-+.+
T Consensus 63 -------------~r~~~~~~~~~~l~~~-------~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 109 (209)
T 1meo_A 63 -------------NRVEFDSAIDLVLEEF-------SIDIVCLAGFMRILSGPFVQKWNGKMLNIHP 109 (209)
T ss_dssp -------------SHHHHHHHHHHHHHHT-------TCCEEEEESCCSCCCHHHHHHTTTSEEEEES
T ss_pred -------------chhhhhHHHHHHHHhc-------CCCEEEEcchhhhCCHHHHhhhcCCEEEEcc
Confidence 0012234566788888 99999876554 3445556667777887744
No 118
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=52.59 E-value=45 Score=29.40 Aligned_cols=21 Identities=24% Similarity=0.371 Sum_probs=16.8
Q ss_pred hhhHHHHHHHhhhhhccCCCCCeEEEeC
Q 043168 97 SFKPHFRKLINGLIDEQNGHKPVCIIAD 124 (473)
Q Consensus 97 ~~~~~l~~~l~~~~~~~~~~~pDlVI~D 124 (473)
.....+.++|++. +||+|+.-
T Consensus 84 ~~~~~l~~~ir~~-------~PdvV~t~ 104 (242)
T 2ixd_A 84 EYIREIVKVIRTY-------KPKLVFAP 104 (242)
T ss_dssp HHHHHHHHHHHHH-------CCSEEEEE
T ss_pred HHHHHHHHHHHHc-------CCCEEEEC
Confidence 4557778899999 99999863
No 119
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=51.67 E-value=12 Score=33.61 Aligned_cols=53 Identities=17% Similarity=0.241 Sum_probs=37.8
Q ss_pred cceeeeccChhhHHHHHhc---CCCEEecccccchhhhHHHHHHHHcceEEEecccCCccCHHHHHHHHHHHHcCC
Q 043168 348 ISAFLSHCGWNSVLEALSH---GVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCEVSKENLSAKFELVMNET 420 (473)
Q Consensus 348 ~~~~I~HgG~gs~~eal~~---GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~~~~~~l~~ai~~~l~~~ 420 (473)
.+++|+=||=||+.+++.. ++|+++++... +|.- ..+.++++.++++.+++..
T Consensus 42 ~D~vv~~GGDGTll~~a~~~~~~~PilGIn~G~--------------~Gfl------~~~~~~~~~~al~~i~~g~ 97 (258)
T 1yt5_A 42 ADLIVVVGGDGTVLKAAKKAADGTPMVGFKAGR--------------LGFL------TSYTLDEIDRFLEDLRNWN 97 (258)
T ss_dssp CSEEEEEECHHHHHHHHTTBCTTCEEEEEESSS--------------CCSS------CCBCGGGHHHHHHHHHTTC
T ss_pred CCEEEEEeCcHHHHHHHHHhCCCCCEEEEECCC--------------CCcc------CcCCHHHHHHHHHHHHcCC
Confidence 5689999999999999876 88998886310 1111 1245777888888777654
No 120
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=51.18 E-value=1e+02 Score=25.40 Aligned_cols=145 Identities=18% Similarity=0.224 Sum_probs=79.6
Q ss_pred CCceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChH
Q 043168 261 CNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQV 340 (473)
Q Consensus 261 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 340 (473)
+.|.|-|-+||.. +....++....|+..|+++-+-+.+.+ ..|+.+.+- +-..
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~saH------------R~p~~l~~~-------------~~~a 63 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSAH------------RMPDEMFDY-------------AEKA 63 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT------------TSHHHHHHH-------------HHHH
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEccc------------cCHHHHHHH-------------HHHH
Confidence 4567888899887 677888899999999888765555442 144443321 1110
Q ss_pred HhhcccccceeeeccC-hh---hHHHHHhcCCCEEecccccch---hhhHHHHHHHH-cceEEE-ecccCCccCHHHHHH
Q 043168 341 EILSHKSISAFLSHCG-WN---SVLEALSHGVPIIGWPLAAEQ---FYNSKLLEEVI-GVCVEV-ARGMNCEVSKENLSA 411 (473)
Q Consensus 341 ~lL~~~~~~~~I~HgG-~g---s~~eal~~GvP~i~~P~~~DQ---~~~a~~v~~~l-G~G~~l-~~~~~~~~~~~~l~~ 411 (473)
. -+ .++.+|.=.| .+ ++..+ ..-+|+|.+|..... .+--..+.... |+.+.. ..+++...++.-++.
T Consensus 64 ~-~~--g~~ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~~~a~NAallA~ 139 (173)
T 4grd_A 64 R-ER--GLRAIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGAANAALFAV 139 (173)
T ss_dssp T-TT--TCSEEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHH
T ss_pred H-hc--CCeEEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCCcchHHHHHHHH
Confidence 0 01 1234554433 22 44444 568999999975432 22222233221 443322 111112334444554
Q ss_pred HHHHHHcCChhhHHHHHHHHHHHHHHHHhh
Q 043168 412 KFELVMNETEKGMDLRKKASEVEMIIKNAV 441 (473)
Q Consensus 412 ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~ 441 (473)
.|- -+.|+ .++++.++++++.++.+
T Consensus 140 ~IL-a~~d~----~l~~kl~~~r~~~~~~v 164 (173)
T 4grd_A 140 SIL-SGNSV----DYANRLAAFRVRQNEAA 164 (173)
T ss_dssp HHH-TTSCH----HHHHHHHHHHHHHHHHH
T ss_pred HHH-cCCCH----HHHHHHHHHHHHHHHHH
Confidence 442 34677 78999888888887554
No 121
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=50.45 E-value=24 Score=32.52 Aligned_cols=41 Identities=12% Similarity=0.092 Sum_probs=34.4
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhh
Q 043168 8 IVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKL 49 (473)
Q Consensus 8 Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v 49 (473)
+++...|+.|-..=++.+|..... .|..|.|++.+.....+
T Consensus 71 ~li~G~pG~GKTtl~l~ia~~~a~-~g~~vl~~slE~s~~~l 111 (315)
T 3bh0_A 71 VLIAARPSMGKTAFALKQAKNMSD-NDDVVNLHSLEMGKKEN 111 (315)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHT-TTCEEEEEESSSCHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHH-cCCeEEEEECCCCHHHH
Confidence 577777899999999999999988 89999999987655444
No 122
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=50.37 E-value=49 Score=31.34 Aligned_cols=63 Identities=19% Similarity=0.309 Sum_probs=41.0
Q ss_pred ccChHHhhcccccceee----eccChh--hHHHHHhcCCCEEe-cccccchhhhHHHHHHHHcceEEEec
Q 043168 336 WAPQVEILSHKSISAFL----SHCGWN--SVLEALSHGVPIIG-WPLAAEQFYNSKLLEEVIGVCVEVAR 398 (473)
Q Consensus 336 ~~p~~~lL~~~~~~~~I----~HgG~g--s~~eal~~GvP~i~-~P~~~DQ~~~a~~v~~~lG~G~~l~~ 398 (473)
|-...+++...++.++. +|++.+ -..+||.+|+++++ -|+..|+-.-..++++.-|+-..+..
T Consensus 57 ~~~~~~l~~~~D~v~i~~p~~~h~~~~~~~a~~al~aGkhVl~EKPl~~~ea~~l~~~A~~~g~~~~v~~ 126 (372)
T 4gmf_A 57 YTSPEQITGMPDIACIVVRSTVAGGAGTQLARHFLARGVHVIQEHPLHPDDISSLQTLAQEQGCCYWINT 126 (372)
T ss_dssp ESSGGGCCSCCSEEEECCC--CTTSHHHHHHHHHHHTTCEEEEESCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred ECCHHHHhcCCCEEEEECCCcccchhHHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHcCCEEEEcC
Confidence 44567777766654443 366643 47789999999988 77776665555555444477777664
No 123
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=50.27 E-value=1.4e+02 Score=27.00 Aligned_cols=106 Identities=10% Similarity=0.051 Sum_probs=61.8
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEEcC-C-cchhhhhhcCCCCCCceEEeccCCCCCCCCCCCCCC
Q 043168 3 QRKENIVMFPLMAQGHIIPFLALALHLENT-NRYTITFVNT-P-SNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTEN 79 (473)
Q Consensus 3 ~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~-rGh~Vt~~~~-~-~~~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~~~ 79 (473)
.+|+||+++..+. || -+.+|.++.... -..+|..+.+ . ......+. .|+.+..+|.. . .
T Consensus 88 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~-----~gIp~~~~~~~-----~-~---- 149 (286)
T 3n0v_A 88 NHRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHW-----HKIPYYHFALD-----P-K---- 149 (286)
T ss_dssp TCCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHH-----TTCCEEECCCB-----T-T----
T ss_pred CCCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHH-----cCCCEEEeCCC-----c-C----
Confidence 3577998888776 44 444555554441 2467666553 3 33444455 45566655511 0 0
Q ss_pred CCCCCCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCc-chHHHHHHHhCCcEEEEccc
Q 043168 80 SDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFF-AWSAEIAQEYGIFNALFVGG 147 (473)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~-~~~~~~A~~~giP~v~~~~~ 147 (473)
.+ ....+.+.+++++. +||+||.-.+. .....+...+.-.++-+.++
T Consensus 150 ---------~r-----~~~~~~~~~~l~~~-------~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 197 (286)
T 3n0v_A 150 ---------DK-----PGQERKVLQVIEET-------GAELVILARYMQVLSPELCRRLDGWAINIHHS 197 (286)
T ss_dssp ---------BH-----HHHHHHHHHHHHHH-------TCSEEEESSCCSCCCHHHHHHTTTSEEEEEEC
T ss_pred ---------CH-----HHHHHHHHHHHHhc-------CCCEEEecccccccCHHHHhhhcCCeEEeccc
Confidence 00 12234567888888 99999977655 35556667777777877543
No 124
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=49.96 E-value=1.2e+02 Score=27.68 Aligned_cols=105 Identities=12% Similarity=0.159 Sum_probs=61.5
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEEcC--CcchhhhhhcCCCCCCceEEeccCCCCCCCCCCCCCCC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENT-NRYTITFVNT--PSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENS 80 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~-rGh~Vt~~~~--~~~~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~~~~ 80 (473)
+|+||+++..+. || -+.+|.++.... -+.+|..+.+ +......+. .++.+..+|.. . .
T Consensus 104 ~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~-----~gIp~~~~~~~----~--~----- 164 (302)
T 3o1l_A 104 QKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEW-----HDIPYYHVPVD----P--K----- 164 (302)
T ss_dssp SCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHT-----TTCCEEECCCC----S--S-----
T ss_pred CCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHH-----cCCCEEEcCCC----c--C-----
Confidence 577998888766 54 355565555441 3467766654 334444444 45566655411 0 0
Q ss_pred CCCCCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcc-hHHHHHHHhCCcEEEEccc
Q 043168 81 DSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA-WSAEIAQEYGIFNALFVGG 147 (473)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
.. ....+.+.+++++. +||+||.-.+.- ....+...+.-.++-+.++
T Consensus 165 ~r-------------~~~~~~~~~~l~~~-------~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 165 DK-------------EPAFAEVSRLVGHH-------QADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp CC-------------HHHHHHHHHHHHHT-------TCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred CH-------------HHHHHHHHHHHHHh-------CCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
Confidence 00 12234567888888 999999776553 4455666677677777543
No 125
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=49.76 E-value=59 Score=28.22 Aligned_cols=38 Identities=11% Similarity=-0.022 Sum_probs=32.2
Q ss_pred ceEEEEcCC-CccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 6 ENIVMFPLM-AQGHIIPFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 6 ~~Il~~~~~-~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
-.+.+++.+ +.|-..-++.++..+.. +|..|.++.+..
T Consensus 12 G~i~litG~mGsGKTT~ll~~~~r~~~-~g~kVli~~~~~ 50 (223)
T 2b8t_A 12 GWIEFITGPMFAGKTAELIRRLHRLEY-ADVKYLVFKPKI 50 (223)
T ss_dssp CEEEEEECSTTSCHHHHHHHHHHHHHH-TTCCEEEEEECC
T ss_pred cEEEEEECCCCCcHHHHHHHHHHHHHh-cCCEEEEEEecc
Confidence 357677666 99999999999999999 999999997554
No 126
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=49.06 E-value=18 Score=31.17 Aligned_cols=49 Identities=12% Similarity=0.065 Sum_probs=35.8
Q ss_pred CCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhh
Q 043168 2 AQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (473)
Q Consensus 2 ~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
..+++||++...|+.+=+ -...|.+.|++..|++|.++.++.....+..
T Consensus 16 ~l~~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A~~fi~~ 64 (206)
T 1qzu_A 16 MERKFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERAKHFYSP 64 (206)
T ss_dssp CCSSEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGGGGSSCG
T ss_pred ccCCCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhHHHHhCH
Confidence 345678988888887754 4689999996524999999999877766654
No 127
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=48.41 E-value=15 Score=32.28 Aligned_cols=37 Identities=16% Similarity=0.204 Sum_probs=30.6
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
|...++||.|+..|..|- .||..|++ +||+|+.+...
T Consensus 2 ~~~~~mkI~IIG~G~~G~-----sLA~~L~~-~G~~V~~~~~~ 38 (232)
T 3dfu_A 2 MQAPRLRVGIFDDGSSTV-----NMAEKLDS-VGHYVTVLHAP 38 (232)
T ss_dssp -CCCCCEEEEECCSCCCS-----CHHHHHHH-TTCEEEECSSG
T ss_pred CCCCCcEEEEEeeCHHHH-----HHHHHHHH-CCCEEEEecCH
Confidence 555677999999998886 68999999 99999987754
No 128
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=47.45 E-value=75 Score=27.29 Aligned_cols=103 Identities=8% Similarity=0.055 Sum_probs=57.1
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEEcCCc-ch---hhhhhcCCCCCCceEEeccCCCCCCCCCCCCCCC
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENT-NRYTITFVNTPS-NL---KKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENS 80 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~-rGh~Vt~~~~~~-~~---~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~~~~ 80 (473)
+||+++..+..+ -+.+|.++..+. -..+|..+.+.. .. +..+. .|+.+..++.. .+.
T Consensus 3 ~riavl~Sg~Gs---nl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~-----~gIp~~~~~~~----~~~------ 64 (211)
T 3p9x_A 3 KRVAIFASGSGT---NAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKV-----HEIPVCALDPK----TYP------ 64 (211)
T ss_dssp CEEEEECCTTCH---HHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHT-----TTCCEEECCGG----GSS------
T ss_pred CEEEEEEeCCch---HHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHH-----cCCCEEEeChh----hcC------
Confidence 589888877532 355666665541 225766666432 22 23333 34454433210 000
Q ss_pred CCCCCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcc-hHHHHHHHhCCcEEEEcc
Q 043168 81 DSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA-WSAEIAQEYGIFNALFVG 146 (473)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~-~~~~~A~~~giP~v~~~~ 146 (473)
.-....+.+.+.+++. +||+||.-.+.. ....+-..+...++-+.+
T Consensus 65 -------------~r~~~d~~~~~~l~~~-------~~Dliv~agy~~Il~~~~l~~~~~~~iNiHp 111 (211)
T 3p9x_A 65 -------------SKEAYEIEVVQQLKEK-------QIDFVVLAGYMRLVGPTLLGAYEGRIVNIHP 111 (211)
T ss_dssp -------------SHHHHHHHHHHHHHHT-------TCCEEEESSCCSCCCHHHHHHHTTSEEEEES
T ss_pred -------------chhhhHHHHHHHHHhc-------CCCEEEEeCchhhcCHHHHhhccCCeEEECC
Confidence 0112344667888888 999999776543 445556666667777744
No 129
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=47.40 E-value=30 Score=27.24 Aligned_cols=42 Identities=2% Similarity=-0.024 Sum_probs=0.0
Q ss_pred HHHHHHHhhhhhccCCCCCeEEEeCCCcc--hHHHHHHHh-------CCcEEEEcccc
Q 043168 100 PHFRKLINGLIDEQNGHKPVCIIADMFFA--WSAEIAQEY-------GIFNALFVGGG 148 (473)
Q Consensus 100 ~~l~~~l~~~~~~~~~~~pDlVI~D~~~~--~~~~~A~~~-------giP~v~~~~~~ 148 (473)
....++++.. +||+||.|..++ .|..+++.. .+|.|.++...
T Consensus 47 ~~al~~~~~~-------~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 47 LTALPMLKKG-------DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HHHHHHHHHH-------CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred HHHHHHHHhC-------CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
No 130
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=46.91 E-value=36 Score=26.99 Aligned_cols=50 Identities=12% Similarity=0.092 Sum_probs=32.2
Q ss_pred CCCCCceEE-EEcCCCccCHHH--HHHHHHHHHhCCCcEEEEEcCCcchhhhhh
Q 043168 1 MAQRKENIV-MFPLMAQGHIIP--FLALALHLENTNRYTITFVNTPSNLKKLKS 51 (473)
Q Consensus 1 m~~~~~~Il-~~~~~~~GHv~P--~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
|+..++|++ ++..+-+|+... .+.+|..+.+ .||+|.++-..+....+.+
T Consensus 1 ~~~~Mkk~~ivv~~~P~g~~~~~~al~~a~a~~a-~~~~v~Vff~~DGV~~~~~ 53 (136)
T 2hy5_B 1 MSEVVKKFMYLNRKAPYGTIYAWEALEVVLIGAA-FDQDVCVLFLDDGVYQLTR 53 (136)
T ss_dssp ----CCEEEEEECSCTTTSSHHHHHHHHHHHHGG-GCCEEEEEECGGGGGGGBS
T ss_pred CccchhEEEEEEeCCCCCcHHHHHHHHHHHHHHh-CCCCEEEEEEhHHHHHHhc
Confidence 555555664 445566776544 5777999999 9999998887766555543
No 131
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=46.32 E-value=53 Score=28.07 Aligned_cols=47 Identities=13% Similarity=0.004 Sum_probs=32.8
Q ss_pred hhhhhhccCCCCceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEE
Q 043168 251 SCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWV 297 (473)
Q Consensus 251 ~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 297 (473)
-+.+|+.....+.++||..+|......+.+....+++++.|..+.++
T Consensus 17 ~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 17 LFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 34556644434569999888775444567788899999999876543
No 132
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=46.23 E-value=16 Score=32.98 Aligned_cols=28 Identities=21% Similarity=0.248 Sum_probs=24.4
Q ss_pred cceeeeccChhhHHHHHhc------CCCEEeccc
Q 043168 348 ISAFLSHCGWNSVLEALSH------GVPIIGWPL 375 (473)
Q Consensus 348 ~~~~I~HgG~gs~~eal~~------GvP~i~~P~ 375 (473)
++++|.=||=||+.+++.. ++|++++|.
T Consensus 36 ~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 36 PEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp CSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 5689999999999998765 899999975
No 133
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=44.69 E-value=98 Score=30.15 Aligned_cols=149 Identities=15% Similarity=0.064 Sum_probs=75.3
Q ss_pred CCceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChH
Q 043168 261 CNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQV 340 (473)
Q Consensus 261 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 340 (473)
.+.++.|+.|..+ ...++.|.+.|..+.++-.. +...+.+... ..++....---..
T Consensus 12 ~~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~---------------~~~~~~~l~~--~~~i~~~~~~~~~ 67 (457)
T 1pjq_A 12 DRDCLIVGGGDVA-------ERKARLLLEAGARLTVNALT---------------FIPQFTVWAN--EGMLTLVEGPFDE 67 (457)
T ss_dssp TCEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESS---------------CCHHHHHHHT--TTSCEEEESSCCG
T ss_pred CCEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCC---------------CCHHHHHHHh--cCCEEEEECCCCc
Confidence 3568888888765 44456666778887666532 2223322221 1233222211122
Q ss_pred HhhcccccceeeeccChhh-----HHHHHhcCCCEEec--ccccchhhhHHHHHHH-HcceEEEecccCCccCHHHHHHH
Q 043168 341 EILSHKSISAFLSHCGWNS-----VLEALSHGVPIIGW--PLAAEQFYNSKLLEEV-IGVCVEVARGMNCEVSKENLSAK 412 (473)
Q Consensus 341 ~lL~~~~~~~~I~HgG~gs-----~~eal~~GvP~i~~--P~~~DQ~~~a~~v~~~-lG~G~~l~~~~~~~~~~~~l~~a 412 (473)
..|..++ ++|.--|.-. ..+|-..|+|+-++ |-..+...-| .+.+. +-+|+. .+.....-+..|++.
T Consensus 68 ~~l~~~~--lVi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa-~~~~~~l~iaIs--T~Gksp~la~~ir~~ 142 (457)
T 1pjq_A 68 TLLDSCW--LAIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPS-IIDRSPLMVAVS--SGGTSPVLARLLREK 142 (457)
T ss_dssp GGGTTCS--EEEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCE-EEEETTEEEEEE--CTTSCHHHHHHHHHH
T ss_pred cccCCcc--EEEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeee-EEEeCCeEEEEE--CCCCChHHHHHHHHH
Confidence 3354544 6777777553 44566789997333 2222221100 00111 124444 311112225778888
Q ss_pred HHHHHcCChhhHHHHHHHHHHHHHHHHh
Q 043168 413 FELVMNETEKGMDLRKKASEVEMIIKNA 440 (473)
Q Consensus 413 i~~~l~~~~~~~~~~~~a~~~~~~~~~a 440 (473)
|...|.+. ...+.+.+.++++.+++.
T Consensus 143 ie~~l~~~--~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 143 LESLLPQH--LGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp HHHHSCTT--HHHHHHHHHHHHHHHHHH
T ss_pred HHHhcchh--HHHHHHHHHHHHHHHHhh
Confidence 88888654 335667777777777754
No 134
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=44.40 E-value=12 Score=35.39 Aligned_cols=45 Identities=20% Similarity=0.263 Sum_probs=33.0
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC-cchhhhhh
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP-SNLKKLKS 51 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~-~~~~~v~~ 51 (473)
|.+.++||.|+..|..|. .+|..|.+ .||+|++.... ...+.+..
T Consensus 25 m~~~~mkI~VIGaG~mG~-----alA~~La~-~G~~V~l~~r~~~~~~~i~~ 70 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGT-----ALALVLAR-KGQKVRLWSYESDHVDEMQA 70 (356)
T ss_dssp --CCCSCEEEECCSHHHH-----HHHHHHHT-TTCCEEEECSCHHHHHHHHH
T ss_pred ccccCCeEEEECccHHHH-----HHHHHHHH-CCCeEEEEeCCHHHHHHHHH
Confidence 555567999999988885 68999999 99999998854 33344444
No 135
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=43.80 E-value=19 Score=31.89 Aligned_cols=43 Identities=16% Similarity=0.129 Sum_probs=31.8
Q ss_pred CCCCCceEEEEc--CCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 1 MAQRKENIVMFP--LMAQGHIIPFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 1 m~~~~~~Il~~~--~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
|+.++.+++.+. -|+-|-..=...||..|.+ +|++|.++-...
T Consensus 1 m~~~~~~vI~v~s~kGGvGKTt~a~~LA~~la~-~g~~VlliD~D~ 45 (257)
T 1wcv_1 1 MLRAKVRRIALANQKGGVGKTTTAINLAAYLAR-LGKRVLLVDLDP 45 (257)
T ss_dssp ----CCCEEEECCSSCCHHHHHHHHHHHHHHHH-TTCCEEEEECCT
T ss_pred CCCCCCEEEEEEeCCCCchHHHHHHHHHHHHHH-CCCCEEEEECCC
Confidence 666666665554 4688999999999999999 999999987554
No 136
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=43.43 E-value=27 Score=30.56 Aligned_cols=39 Identities=8% Similarity=-0.021 Sum_probs=34.4
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
+.+|++..-|+-|-.+-++.+|..|.. +|++|.++..+.
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~-~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLR-QGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHH-TTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHH-CCCCEEEEEeCC
Confidence 557888889999999999999999999 999998777543
No 137
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=43.38 E-value=17 Score=33.32 Aligned_cols=37 Identities=11% Similarity=0.053 Sum_probs=29.2
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
|.+.+++|.|+..|..|+ .+|..|.+ .||+|+++...
T Consensus 11 ~~~~~~~I~VIG~G~mG~-----~iA~~la~-~G~~V~~~d~~ 47 (302)
T 1f0y_A 11 KKIIVKHVTVIGGGLMGA-----GIAQVAAA-TGHTVVLVDQT 47 (302)
T ss_dssp -CCCCCEEEEECCSHHHH-----HHHHHHHH-TTCEEEEECSC
T ss_pred ccccCCEEEEECCCHHHH-----HHHHHHHh-CCCeEEEEECC
Confidence 444556899999888887 58899999 99999988643
No 138
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=43.20 E-value=50 Score=30.97 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=22.9
Q ss_pred hhcccccceeeeccChhhH---HHHHhcCCCEEec
Q 043168 342 ILSHKSISAFLSHCGWNSV---LEALSHGVPIIGW 373 (473)
Q Consensus 342 lL~~~~~~~~I~HgG~gs~---~eal~~GvP~i~~ 373 (473)
++..-+-+++|++||.-|+ ..|...|+|.++.
T Consensus 87 ~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 87 VIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp HHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 4443344589999998765 4577789999863
No 139
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=42.70 E-value=38 Score=30.35 Aligned_cols=41 Identities=15% Similarity=0.075 Sum_probs=32.7
Q ss_pred hhHHHHHHHhhhhhccCCCCCeEEEeCCCcc------hHHHHHHHhCCcEEEEc
Q 043168 98 FKPHFRKLINGLIDEQNGHKPVCIIADMFFA------WSAEIAQEYGIFNALFV 145 (473)
Q Consensus 98 ~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~------~~~~~A~~~giP~v~~~ 145 (473)
....+.++++.. +||+|++..... .+..+|..+|+|+++..
T Consensus 100 ~a~~La~~i~~~-------~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v 146 (264)
T 1o97_C 100 VGRILTEVIKKE-------APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVV 146 (264)
T ss_dssp HHHHHHHHHHHH-------CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHhc-------CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccce
Confidence 345566778888 899999887663 67889999999999874
No 140
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=41.67 E-value=1.2e+02 Score=27.93 Aligned_cols=58 Identities=17% Similarity=0.208 Sum_probs=38.7
Q ss_pred cccChHHhhcccccceeeeccChhh----HHHHHhcCCCEEe-cccccc--hh-hhHHHHHHHHcce
Q 043168 335 KWAPQVEILSHKSISAFLSHCGWNS----VLEALSHGVPIIG-WPLAAE--QF-YNSKLLEEVIGVC 393 (473)
Q Consensus 335 ~~~p~~~lL~~~~~~~~I~HgG~gs----~~eal~~GvP~i~-~P~~~D--Q~-~~a~~v~~~lG~G 393 (473)
-|-...++|..+++++++--.-..+ +.+||.+|+++++ -|+..+ +- ...+.+++. |+-
T Consensus 55 ~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~-g~~ 120 (337)
T 3ip3_A 55 KYNNWWEMLEKEKPDILVINTVFSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQKV-RNE 120 (337)
T ss_dssp ECSSHHHHHHHHCCSEEEECSSHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH-TTT
T ss_pred ccCCHHHHhcCCCCCEEEEeCCcchHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHh-CCc
Confidence 4567788998877878876554443 7789999999887 587653 33 233344444 655
No 141
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=41.62 E-value=45 Score=26.19 Aligned_cols=46 Identities=11% Similarity=0.000 Sum_probs=32.4
Q ss_pred CceEEEE-cCC--CccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhh
Q 043168 5 KENIVMF-PLM--AQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (473)
Q Consensus 5 ~~~Il~~-~~~--~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
++|++|+ ..+ +.......+.+|....+ .||+|+++-+......+.+
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a-~g~eV~vFf~~dGV~~l~k 63 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISAS-MEYETSVFFMIXGPXLLDX 63 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHH-TTCEEEEEECTTGGGGGBH
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHH-CCCCEEEEEEeCcHHHHhh
Confidence 3465444 444 45667788889999999 9999998887765555443
No 142
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=41.54 E-value=18 Score=28.09 Aligned_cols=29 Identities=14% Similarity=-0.079 Sum_probs=21.1
Q ss_pred CCeEEEeCCCcc--hHHHHHHH---hCCcEEEEc
Q 043168 117 KPVCIIADMFFA--WSAEIAQE---YGIFNALFV 145 (473)
Q Consensus 117 ~pDlVI~D~~~~--~~~~~A~~---~giP~v~~~ 145 (473)
+||+||.|..++ .|..+++. .++|+|.++
T Consensus 53 ~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 53 QFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 899999999887 35544443 578876653
No 143
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=41.44 E-value=1.9e+02 Score=26.44 Aligned_cols=109 Identities=15% Similarity=0.120 Sum_probs=58.6
Q ss_pred eEEEEecCcccCCHHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChHHh
Q 043168 264 VIYVSFGSQNTIAASQMMQLAMALEAC-GKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEI 342 (473)
Q Consensus 264 ~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~l 342 (473)
+.+|+.|.++ ..++.++... +..++.+..... + ....+.++.. + ..-+-...++
T Consensus 8 igiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~~------~------~~~~~~~~~~-----~-~~~~~~~~~l 62 (330)
T 3e9m_A 8 YGIMSTAQIV-------PRFVAGLRESAQAEVRGIASRRL------E------NAQKMAKELA-----I-PVAYGSYEEL 62 (330)
T ss_dssp EEECSCCTTH-------HHHHHHHHHSSSEEEEEEBCSSS------H------HHHHHHHHTT-----C-CCCBSSHHHH
T ss_pred EEEECchHHH-------HHHHHHHHhCCCcEEEEEEeCCH------H------HHHHHHHHcC-----C-CceeCCHHHH
Confidence 6778888776 3455666664 455554443221 0 1112222221 1 0134566788
Q ss_pred hcccccceeeeccChh----hHHHHHhcCCCEEe-ccccc--chhh-hHHHHHHHHcceEEEec
Q 043168 343 LSHKSISAFLSHCGWN----SVLEALSHGVPIIG-WPLAA--EQFY-NSKLLEEVIGVCVEVAR 398 (473)
Q Consensus 343 L~~~~~~~~I~HgG~g----s~~eal~~GvP~i~-~P~~~--DQ~~-~a~~v~~~lG~G~~l~~ 398 (473)
|..+++++++--.-.. .+.+|+.+|+++++ -|+.. ++-. ..+..++. |+-+.+..
T Consensus 63 l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~-g~~~~v~~ 125 (330)
T 3e9m_A 63 CKDETIDIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQ-GVFLMEAQ 125 (330)
T ss_dssp HHCTTCSEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHT-TCCEEECC
T ss_pred hcCCCCCEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHc-CCeEEEEE
Confidence 8866676776544433 36788999999887 46543 3332 23334444 66555543
No 144
>2p90_A Hypothetical protein CGL1923; structural genomics, PSI-2, MCSG structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} SCOP: c.56.8.1
Probab=41.35 E-value=2.1e+02 Score=26.21 Aligned_cols=137 Identities=11% Similarity=0.054 Sum_probs=68.6
Q ss_pred CceEEEEecCcccCCH-HHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChH
Q 043168 262 NSVIYVSFGSQNTIAA-SQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQV 340 (473)
Q Consensus 262 ~~~V~vs~GS~~~~~~-~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 340 (473)
+++++++ |....... .+..++++-+++.+++-++.++.-. ...|.. + +..+.....- .
T Consensus 102 ~~~lll~-gpeP~~~w~~f~~~vl~~a~~~gV~~vv~Lggl~-----------~~~pht-----r--p~~V~~~at~--~ 160 (319)
T 2p90_A 102 KPFLMLS-GPEPDLRWGDFSNAVVDLVEKFGVENTICLYAAP-----------MTVPHT-----R--PTVVTAHGNS--T 160 (319)
T ss_dssp CEEEEEE-EECCSBCHHHHHHHHHHHHHHTTCCEEEEEEEEE-----------ESCCTT-----S--CCCEEEEESS--G
T ss_pred CeEEEEE-CCCChHHHHHHHHHHHHHHHHcCCCEEEEEeCcc-----------CCCCCC-----C--CCCeEEEeCC--H
Confidence 4455554 55544454 5667788888889999888776421 001110 0 3333332221 2
Q ss_pred Hhhcccc--cceeeeccChhhHH--HHHhcCCCEEec----cccc---chhhhHHHHHHHHc--ceEEEecccCCccCHH
Q 043168 341 EILSHKS--ISAFLSHCGWNSVL--EALSHGVPIIGW----PLAA---EQFYNSKLLEEVIG--VCVEVARGMNCEVSKE 407 (473)
Q Consensus 341 ~lL~~~~--~~~~I~HgG~gs~~--eal~~GvP~i~~----P~~~---DQ~~~a~~v~~~lG--~G~~l~~~~~~~~~~~ 407 (473)
.++..-. ..-..-.||..++. +|...|+|.+++ |++. +.+.-|..+-+.+. .|+.++.+. -.-.++
T Consensus 161 ~l~~~~~~~~~~~~ipggi~glL~~~~~~~Gi~a~~l~~~vphYl~~~pdP~AA~~lL~~l~~l~gl~id~~~-L~e~A~ 239 (319)
T 2p90_A 161 DRLKDQVSLDTRMTVPGSASLMLEKLLKDKGKNVSGYTVHVPHYVSASPYPAATLKLLQSIADSADLNLPLLA-LERDAE 239 (319)
T ss_dssp GGCSSCCCCCCCEEECCCHHHHHHHHHHHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHHHTCCCCCHH-HHHHHH
T ss_pred HHHhhhhccccCcEEeccHHHHHHHHHHHCCCCEEEEEEecCcccCCCCCHHHHHHHHHHHHHHHCCCCCHHH-HHHHHH
Confidence 2221100 00112235666555 567899999874 5433 44545544433322 233333300 233456
Q ss_pred HHHHHHHHHHcCC
Q 043168 408 NLSAKFELVMNET 420 (473)
Q Consensus 408 ~l~~ai~~~l~~~ 420 (473)
++.+.|+++.+..
T Consensus 240 ~~e~~i~~l~~~~ 252 (319)
T 2p90_A 240 KVHRQLMEQTEES 252 (319)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhh
Confidence 7777888887644
No 145
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=41.26 E-value=48 Score=26.46 Aligned_cols=97 Identities=14% Similarity=0.063 Sum_probs=58.4
Q ss_pred EEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhhcCCCCCCceEEeccCCCCCCCCCCCCCCCCCCCCCCc
Q 043168 9 VMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDSLPFHLF 88 (473)
Q Consensus 9 l~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~~~~~~~~~~~~ 88 (473)
+|++... .+=.-++.+|+.|.+ .||++. +| ......++..| +....+.. .+.+..
T Consensus 27 vliSv~d-~dK~~l~~~a~~l~~-lGf~i~-AT-~GTa~~L~~~G-----i~v~~v~k------~~egg~---------- 81 (143)
T 2yvq_A 27 ILIGIQQ-SFRPRFLGVAEQLHN-EGFKLF-AT-EATSDWLNANN-----VPATPVAW------PSQEGQ---------- 81 (143)
T ss_dssp EEEECCG-GGHHHHHHHHHHHHT-TTCEEE-EE-HHHHHHHHHTT-----CCCEEECC------GGGC------------
T ss_pred EEEEecc-cchHHHHHHHHHHHH-CCCEEE-EC-chHHHHHHHcC-----CeEEEEEe------ccCCCc----------
Confidence 4555433 355678899999999 999843 33 34456777744 35444331 111100
Q ss_pred hHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCc--------chHHHHHHHhCCcEEEE
Q 043168 89 PNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFF--------AWSAEIAQEYGIFNALF 144 (473)
Q Consensus 89 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~--------~~~~~~A~~~giP~v~~ 144 (473)
....+.+.+.|++. +.|+||.-... +.....|-.++||+++-
T Consensus 82 -------~~~~~~i~d~i~~g-------~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 82 -------NPSLSSIRKLIRDG-------SIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp ----------CBCHHHHHHTT-------SCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred -------ccccccHHHHHHCC-------CceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 00003467788888 99999985533 12346788999998764
No 146
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=41.18 E-value=14 Score=29.17 Aligned_cols=33 Identities=15% Similarity=0.199 Sum_probs=25.3
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
++||+++..+..| ..+|+.|.+ +||+|+.+...
T Consensus 6 ~~~v~I~G~G~iG-----~~la~~L~~-~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAG-----VGLVRELTA-AGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHH-----HHHHHHHHH-TTCCEEEEESC
T ss_pred CCEEEEECCCHHH-----HHHHHHHHH-CCCeEEEEECC
Confidence 4588888764433 578999999 99999988753
No 147
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=41.16 E-value=95 Score=23.79 Aligned_cols=36 Identities=17% Similarity=0.152 Sum_probs=23.9
Q ss_pred CceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEE
Q 043168 262 NSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWV 297 (473)
Q Consensus 262 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 297 (473)
+.+|+|+.||........+..+.+.++.....+.+.
T Consensus 6 ~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a 41 (126)
T 3lyh_A 6 HQIILLAHGSSDARWCETFEKLAEPTVESIENAAIA 41 (126)
T ss_dssp EEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEE
Confidence 459999999985433456777777776643444444
No 148
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=40.74 E-value=82 Score=27.28 Aligned_cols=21 Identities=14% Similarity=0.327 Sum_probs=17.0
Q ss_pred hhhHHHHHHHhhhhhccCCCCCeEEEeC
Q 043168 97 SFKPHFRKLINGLIDEQNGHKPVCIIAD 124 (473)
Q Consensus 97 ~~~~~l~~~l~~~~~~~~~~~pDlVI~D 124 (473)
.....+.++|++. +||+|+..
T Consensus 82 ~~~~~l~~~ir~~-------~P~~V~t~ 102 (227)
T 1uan_A 82 EQRLKLAQALRRL-------RPRVVFAP 102 (227)
T ss_dssp HHHHHHHHHHHHH-------CEEEEEEE
T ss_pred HHHHHHHHHHHHh-------CCCEEEeC
Confidence 4557788899999 99999863
No 149
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=40.69 E-value=43 Score=28.43 Aligned_cols=30 Identities=10% Similarity=0.197 Sum_probs=24.4
Q ss_pred CCeEEEeCCCcchHHHHHHHhCCcEEEEccccH
Q 043168 117 KPVCIIADMFFAWSAEIAQEYGIFNALFVGGGS 149 (473)
Q Consensus 117 ~pDlVI~D~~~~~~~~~A~~~giP~v~~~~~~~ 149 (473)
+.|+||+|.. ...+|+++|+|++.+.++.-
T Consensus 142 G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~e 171 (196)
T 2q5c_A 142 NIKIVVSGKT---VTDEAIKQGLYGETINSGEE 171 (196)
T ss_dssp TCCEEEECHH---HHHHHHHTTCEEEECCCCHH
T ss_pred CCeEEECCHH---HHHHHHHcCCcEEEEecCHH
Confidence 7999999852 47789999999999876443
No 150
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=40.65 E-value=1.5e+02 Score=26.84 Aligned_cols=105 Identities=8% Similarity=0.079 Sum_probs=59.2
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEEcCCc---chhhhhhcCCCCCCceEEeccCCCCCCCCCCCCCC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENT-NRYTITFVNTPS---NLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTEN 79 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~-rGh~Vt~~~~~~---~~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~~~ 79 (473)
+|+||+++..+. || -+.+|.++.... -..+|..+.+.. ..+..+. .|+.+..+|.. . .
T Consensus 88 ~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~-----~gIp~~~~~~~----~--~---- 149 (288)
T 3obi_A 88 TRRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFDF-----GDIPFYHFPVN----K--D---- 149 (288)
T ss_dssp SCEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTT-----TTCCEEECCCC----T--T----
T ss_pred CCcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHHH-----cCCCEEEeCCC----c--c----
Confidence 567998888665 44 334555554441 235766665432 2222222 56666655511 0 0
Q ss_pred CCCCCCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCc-chHHHHHHHhCCcEEEEccc
Q 043168 80 SDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFF-AWSAEIAQEYGIFNALFVGG 147 (473)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~-~~~~~~A~~~giP~v~~~~~ 147 (473)
. -....+.+.+++++. +||+||.-.+. .....+...+.-.++-+.++
T Consensus 150 ---------~-----r~~~~~~~~~~l~~~-------~~Dlivlagy~~il~~~~l~~~~~~~iNiHpS 197 (288)
T 3obi_A 150 ---------T-----RRQQEAAITALIAQT-------HTDLVVLARYMQILSDEMSARLAGRCINIHHS 197 (288)
T ss_dssp ---------T-----HHHHHHHHHHHHHHH-------TCCEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred ---------c-----HHHHHHHHHHHHHhc-------CCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcc
Confidence 0 012234567888888 99999976655 35556667777777877543
No 151
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=40.32 E-value=24 Score=28.72 Aligned_cols=35 Identities=14% Similarity=0.201 Sum_probs=28.8
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
.++++++.++ | +.|++.+++.|.+ +|.+|+++ ...
T Consensus 24 ~~~llIaGG~-G-ItPl~sm~~~l~~-~~~~v~l~-g~r 58 (158)
T 3lrx_A 24 GKILAIGAYT-G-IVEVYPIAKAWQE-IGNDVTTL-HVT 58 (158)
T ss_dssp SEEEEEEETT-H-HHHHHHHHHHHHH-HTCEEEEE-EEC
T ss_pred CeEEEEEccC-c-HHHHHHHHHHHHh-cCCcEEEE-EeC
Confidence 4788888665 3 8999999999999 89899888 544
No 152
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=39.74 E-value=45 Score=29.67 Aligned_cols=41 Identities=12% Similarity=-0.083 Sum_probs=31.9
Q ss_pred hhHHHHHHHhhhhhccCCCCCeEEEeCCCcc------hHHHHHHHhCCcEEEEc
Q 043168 98 FKPHFRKLINGLIDEQNGHKPVCIIADMFFA------WSAEIAQEYGIFNALFV 145 (473)
Q Consensus 98 ~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~------~~~~~A~~~giP~v~~~ 145 (473)
....+.++++.. +||+|++..... .+..+|..+|+|+++..
T Consensus 104 ~A~~La~~i~~~-------~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v 150 (255)
T 1efv_B 104 VARVLAKLAEKE-------KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFA 150 (255)
T ss_dssp HHHHHHHHHHHH-------TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHhc-------CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccce
Confidence 334556677777 899999887653 57889999999999874
No 153
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=39.70 E-value=19 Score=33.30 Aligned_cols=36 Identities=8% Similarity=-0.016 Sum_probs=28.8
Q ss_pred EEEEcCCCccCHH--------------HHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 8 IVMFPLMAQGHII--------------PFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 8 Il~~~~~~~GHv~--------------P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
|++.++|+.=.+. .-.++|+++.+ +|++|++++.+.
T Consensus 40 VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~-~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 40 VLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLA-AGYGVLFLYRAR 89 (313)
T ss_dssp EEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHH-TTCEEEEEEETT
T ss_pred EEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHH-CCCEEEEEecCC
Confidence 7777777766662 56689999999 999999999653
No 154
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=39.69 E-value=1e+02 Score=31.20 Aligned_cols=80 Identities=11% Similarity=0.197 Sum_probs=47.3
Q ss_pred HHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChHHhhcc---------cccce
Q 043168 280 MMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSH---------KSISA 350 (473)
Q Consensus 280 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~---------~~~~~ 350 (473)
-+.+++.|.+.|++.++.+.... ...+.+.+.+..+.+... +..+.....+ ....+
T Consensus 7 a~~lv~~L~~~GV~~vfg~PG~~--------------~~~l~~al~~~~~~i~~i-~~~~E~~Aa~~A~GyAr~tgk~~v 71 (590)
T 1v5e_A 7 GLAVMKILESWGADTIYGIPSGT--------------LSSLMDAMGEEENNVKFL-QVKHEEVGAMAAVMQSKFGGNLGV 71 (590)
T ss_dssp HHHHHHHHHHTTCCEEEECCCTT--------------THHHHTTSSSTTCCCEEE-ECSSHHHHHHHHHHHHHTTCCCCE
T ss_pred HHHHHHHHHHcCCCEEEEecCCc--------------hHHHHHHHHhcCCCCeEE-eeCCHHHHHHHHHHHHHHHCCCEE
Confidence 35678888899999888776541 122333332110223321 1222221111 23557
Q ss_pred eeeccC------hhhHHHHHhcCCCEEecc
Q 043168 351 FLSHCG------WNSVLEALSHGVPIIGWP 374 (473)
Q Consensus 351 ~I~HgG------~gs~~eal~~GvP~i~~P 374 (473)
+++|.| .+.+.+|-+.++|+|++-
T Consensus 72 ~~~tsGpG~~N~~~gl~~A~~~~vPll~It 101 (590)
T 1v5e_A 72 TVGSGGPGASHLINGLYDAAMDNIPVVAIL 101 (590)
T ss_dssp EEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred EEeCcChHHHHHHHHHHHHHhcCCCEEEEc
Confidence 899998 568889999999999973
No 155
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=39.42 E-value=89 Score=28.56 Aligned_cols=40 Identities=20% Similarity=0.057 Sum_probs=25.8
Q ss_pred HHHHHHhhhhhccCCCCCeEEEeCCCcc-hHHHHHHHhCCcEEEEccc
Q 043168 101 HFRKLINGLIDEQNGHKPVCIIADMFFA-WSAEIAQEYGIFNALFVGG 147 (473)
Q Consensus 101 ~l~~~l~~~~~~~~~~~pDlVI~D~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
.+.+.+++. +||+||+-.+.. ....+-......++-++++
T Consensus 66 ~~~~~l~~~-------~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 106 (305)
T 2bln_A 66 LWVERIAQL-------SPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (305)
T ss_dssp HHHHHHHHT-------CCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHHhc-------CCCEEEEeccccccCHHHHhcCcCCEEEecCC
Confidence 345677888 999999765432 3344455555667777554
No 156
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=39.29 E-value=30 Score=31.76 Aligned_cols=39 Identities=13% Similarity=0.117 Sum_probs=31.5
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhh
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
+||+++..|+.|- .+|..|.+ .||+|+++.... .+.+..
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~-~g~~V~~~~r~~-~~~i~~ 41 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQR-SGEDVHFLLRRD-YEAIAG 41 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHH-TSCCEEEECSTT-HHHHHH
T ss_pred CEEEEECcCHHHH-----HHHHHHHH-CCCeEEEEEcCc-HHHHHh
Confidence 4899999999985 56889999 999999998655 466665
No 157
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=39.24 E-value=2.1e+02 Score=26.42 Aligned_cols=127 Identities=17% Similarity=0.112 Sum_probs=69.1
Q ss_pred ceEEEEecCcccCCHHHHHHHHHHHHhC--CCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChH
Q 043168 263 SVIYVSFGSQNTIAASQMMQLAMALEAC--GKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQV 340 (473)
Q Consensus 263 ~~V~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 340 (473)
.+.+|+.|.++ ...+.++... +..++.+..... + .-..+.++. ++ ..+-...
T Consensus 15 rvgiiG~G~~g-------~~~~~~l~~~~~~~~lvav~d~~~------~------~~~~~~~~~-----~~--~~~~~~~ 68 (354)
T 3q2i_A 15 RFALVGCGRIA-------NNHFGALEKHADRAELIDVCDIDP------A------ALKAAVERT-----GA--RGHASLT 68 (354)
T ss_dssp EEEEECCSTTH-------HHHHHHHHHTTTTEEEEEEECSSH------H------HHHHHHHHH-----CC--EEESCHH
T ss_pred eEEEEcCcHHH-------HHHHHHHHhCCCCeEEEEEEcCCH------H------HHHHHHHHc-----CC--ceeCCHH
Confidence 47889999887 3455666664 566555543220 0 011222222 22 2355678
Q ss_pred HhhcccccceeeeccCh----hhHHHHHhcCCCEEe-ccccc--chh-hhHHHHHHHHcceEEEecccCCccCHHHHHHH
Q 043168 341 EILSHKSISAFLSHCGW----NSVLEALSHGVPIIG-WPLAA--EQF-YNSKLLEEVIGVCVEVARGMNCEVSKENLSAK 412 (473)
Q Consensus 341 ~lL~~~~~~~~I~HgG~----gs~~eal~~GvP~i~-~P~~~--DQ~-~~a~~v~~~lG~G~~l~~~~~~~~~~~~l~~a 412 (473)
++|..+++++++--.-. --+.+|+.+|+++++ -|+.. ++- ...+..++. |+-+.+.. .....+ ..+.
T Consensus 69 ~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~-g~~~~v~~--~~r~~p--~~~~ 143 (354)
T 3q2i_A 69 DMLAQTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKA-KKHLFVVK--QNRRNA--TLQL 143 (354)
T ss_dssp HHHHHCCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH-TCCEEECC--GGGGSH--HHHH
T ss_pred HHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHh-CCeEEEEE--cccCCH--HHHH
Confidence 88886666677643332 246689999999987 47654 332 233344444 76665544 123444 3455
Q ss_pred HHHHHcCC
Q 043168 413 FELVMNET 420 (473)
Q Consensus 413 i~~~l~~~ 420 (473)
+++++.+.
T Consensus 144 ~k~~i~~g 151 (354)
T 3q2i_A 144 LKRAMQEK 151 (354)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhcC
Confidence 55666543
No 158
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=39.20 E-value=45 Score=29.61 Aligned_cols=40 Identities=18% Similarity=0.037 Sum_probs=31.3
Q ss_pred hHHHHHHHhhhhhccCCCCCeEEEeCCCcc------hHHHHHHHhCCcEEEEc
Q 043168 99 KPHFRKLINGLIDEQNGHKPVCIIADMFFA------WSAEIAQEYGIFNALFV 145 (473)
Q Consensus 99 ~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~------~~~~~A~~~giP~v~~~ 145 (473)
...+.++++.. +||+|++..... .+..+|..+|+|+++..
T Consensus 102 a~~La~~i~~~-------~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v 147 (252)
T 1efp_B 102 AKILAAVARAE-------GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFA 147 (252)
T ss_dssp HHHHHHHHHHH-------TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHhc-------CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccE
Confidence 34556667777 899999887553 67889999999999874
No 159
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=39.17 E-value=1.3e+02 Score=23.26 Aligned_cols=49 Identities=10% Similarity=-0.031 Sum_probs=32.6
Q ss_pred cCCCEEecccccchhhhHHHHHHHHcceEEEecccCCccCHHHHHHHHHHHHcCC
Q 043168 366 HGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCEVSKENLSAKFELVMNET 420 (473)
Q Consensus 366 ~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~~~~~~l~~ai~~~l~~~ 420 (473)
..+|+|++--..+.. ......+. |+--.+. +.++.+++..+|+.++...
T Consensus 74 ~~~pii~ls~~~~~~-~~~~~~~~-g~~~~l~----kP~~~~~L~~~i~~~~~~~ 122 (155)
T 1qkk_A 74 PDLPMILVTGHGDIP-MAVQAIQD-GAYDFIA----KPFAADRLVQSARRAEEKR 122 (155)
T ss_dssp TTSCEEEEECGGGHH-HHHHHHHT-TCCEEEE----SSCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChH-HHHHHHhc-CCCeEEe----CCCCHHHHHHHHHHHHHHH
Confidence 478998885544433 33334435 6654554 4689999999999998654
No 160
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=39.16 E-value=61 Score=31.27 Aligned_cols=31 Identities=19% Similarity=0.234 Sum_probs=21.8
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCc-EEEEEc
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRY-TITFVN 41 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh-~Vt~~~ 41 (473)
++|||++..++.-| +||+.|.+ .+. .-+++.
T Consensus 3 ~mkvlviG~ggre~-----ala~~l~~-s~~v~~v~~~ 34 (431)
T 3mjf_A 3 AMNILIIGNGGREH-----ALGWKAAQ-SPLADKIYVA 34 (431)
T ss_dssp CEEEEEEECSHHHH-----HHHHHHTT-CTTEEEEEEE
T ss_pred CcEEEEECCCHHHH-----HHHHHHHh-CCCCCEEEEE
Confidence 46999998886554 78999988 664 334444
No 161
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=38.96 E-value=32 Score=33.66 Aligned_cols=34 Identities=9% Similarity=0.046 Sum_probs=28.3
Q ss_pred HHHHHHhhhhhccCCCCCeEEEeCCCcchHHHHHHHhCCcEEEE
Q 043168 101 HFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALF 144 (473)
Q Consensus 101 ~l~~~l~~~~~~~~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~ 144 (473)
.+.+++++. +||+||.... ...+|+++|||++.+
T Consensus 366 ~le~~i~~~-------~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 DLEHAARAG-------QAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHHH-------TCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHHhc-------CCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 366788888 9999999853 567899999999976
No 162
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=38.66 E-value=20 Score=33.38 Aligned_cols=41 Identities=20% Similarity=0.179 Sum_probs=32.2
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhh
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
++||+++..|+.|- .+|..|.+ .||+|+++......+.+..
T Consensus 3 ~mkI~IiGaG~~G~-----~~a~~L~~-~g~~V~~~~r~~~~~~~~~ 43 (335)
T 3ghy_A 3 LTRICIVGAGAVGG-----YLGARLAL-AGEAINVLARGATLQALQT 43 (335)
T ss_dssp CCCEEEESCCHHHH-----HHHHHHHH-TTCCEEEECCHHHHHHHHH
T ss_pred CCEEEEECcCHHHH-----HHHHHHHH-CCCEEEEEEChHHHHHHHH
Confidence 45899998888875 57899999 9999999996544455555
No 163
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=38.66 E-value=34 Score=27.37 Aligned_cols=45 Identities=11% Similarity=0.165 Sum_probs=35.4
Q ss_pred ceE-EEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhh
Q 043168 6 ENI-VMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (473)
Q Consensus 6 ~~I-l~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
+++ +++..+..-.+.+.+.+|...++ .|++|+++.+......+.+
T Consensus 8 ~kl~II~~sg~~d~~~~a~~lA~~Aaa-~g~eV~iF~t~~gv~~l~k 53 (144)
T 2qs7_A 8 KKLSIIVFSGTIDKLMPVGILTSGAAA-SGYEVNLFFTFWGLQAITK 53 (144)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHHHHHH-TTCEEEEEECHHHHHHTBH
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHHHH-cCCcEEEEEehHHHHHHhc
Confidence 355 44555678888899999999999 9999999998877666554
No 164
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=37.25 E-value=1.3e+02 Score=25.26 Aligned_cols=101 Identities=20% Similarity=0.132 Sum_probs=54.2
Q ss_pred hhhhhhccCCCCceEEEEecCc-ccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCC
Q 043168 251 SCKNWLDTKPCNSVIYVSFGSQ-NTIAASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQ 329 (473)
Q Consensus 251 ~l~~~l~~~~~~~~V~vs~GS~-~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (473)
++-.+|.+.. ...|+.|.. + .+....++..+.+..++-+++.. +.+. +.....-.
T Consensus 24 ~lg~~La~~g---~~lV~GGg~~G-----iM~aa~~gA~~~gG~~iGv~p~~--------------l~~~--e~~~~~~~ 79 (191)
T 1t35_A 24 ELGVYMAEQG---IGLVYGGSRVG-----LMGTIADAIMENGGTAIGVMPSG--------------LFSG--EVVHQNLT 79 (191)
T ss_dssp HHHHHHHHTT---CEEEECCCCSH-----HHHHHHHHHHTTTCCEEEEEETT--------------CCHH--HHTTCCCS
T ss_pred HHHHHHHHCC---CEEEECCCccc-----HHHHHHHHHHHcCCeEEEEeCch--------------hccc--ccccCCCC
Confidence 4445565542 455665543 3 34555555555666666665533 1111 00000022
Q ss_pred CeEEecccCh-HHhhcccccceeeeccChhhHHHH---H------hcCCCEEeccc
Q 043168 330 GLVVQKWAPQ-VEILSHKSISAFLSHCGWNSVLEA---L------SHGVPIIGWPL 375 (473)
Q Consensus 330 ~v~~~~~~p~-~~lL~~~~~~~~I~HgG~gs~~ea---l------~~GvP~i~~P~ 375 (473)
+.....+.+. ..++...+-..++--||.||+-|. + .+++|++.+-.
T Consensus 80 ~~~~~~~~~~Rk~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 80 ELIEVNGMHERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp EEEEESHHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred ccccCCCHHHHHHHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 3344455554 444443333478889999998764 5 37899999864
No 165
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=37.25 E-value=92 Score=30.02 Aligned_cols=31 Identities=16% Similarity=0.090 Sum_probs=23.9
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
+||+++.. | ...+.+++++++ .|++|+.+.+
T Consensus 3 k~ilI~g~---g--~~~~~~~~a~~~-~G~~vv~v~~ 33 (449)
T 2w70_A 3 DKIVIANR---G--EIALRILRACKE-LGIKTVAVHS 33 (449)
T ss_dssp SEEEECCC---H--HHHHHHHHHHHH-HTCEEEEEEE
T ss_pred ceEEEeCC---c--HHHHHHHHHHHH-cCCeEEEEec
Confidence 48888763 3 245689999999 9999988864
No 166
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=37.00 E-value=1.4e+02 Score=25.57 Aligned_cols=45 Identities=16% Similarity=0.082 Sum_probs=29.4
Q ss_pred eEEecccCh-HHhhcccccceeeeccChhhHHHHHh---------cCCCEEeccc
Q 043168 331 LVVQKWAPQ-VEILSHKSISAFLSHCGWNSVLEALS---------HGVPIIGWPL 375 (473)
Q Consensus 331 v~~~~~~p~-~~lL~~~~~~~~I~HgG~gs~~eal~---------~GvP~i~~P~ 375 (473)
+.+..+.+. ..++..-+-..++--||.||+-|..- +++|++.+-.
T Consensus 93 ~~~~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 93 VRAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EEEESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred eeecCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 344455554 44444333347788999999987752 4899998764
No 167
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=36.97 E-value=59 Score=30.20 Aligned_cols=72 Identities=14% Similarity=0.051 Sum_probs=49.3
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChHHhhcccccceeeecc
Q 043168 276 AASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHC 355 (473)
Q Consensus 276 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~Hg 355 (473)
..+..+.+.+++.+..++.||.+..+. .-.++.++++...+-+++. .||-+.
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~--------------------------g~~rlL~~lD~~~i~~~PK--~~~GyS 114 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGGY--------------------------NSNGLLKYLDYDLIRENPK--FFCGYS 114 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS--------------------------CGGGGGGGCCHHHHHTSCC--EEEECG
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccc--------------------------cHHHHHhhcChhHHHhCCe--EEEEec
Confidence 345677788999998899999887662 1112346666665555655 577777
Q ss_pred ChhhHHHHHh--cCCCEEeccc
Q 043168 356 GWNSVLEALS--HGVPIIGWPL 375 (473)
Q Consensus 356 G~gs~~eal~--~GvP~i~~P~ 375 (473)
-...++-+++ .|++.+.-|.
T Consensus 115 DiTaL~~al~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 115 DITALNNAIYTKTGLVTYSGPH 136 (331)
T ss_dssp GGHHHHHHHHHHHCBCEEECCC
T ss_pred chHHHHHHHHHhhCCcEEEccc
Confidence 7777777776 4777777665
No 168
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=36.93 E-value=2.4e+02 Score=25.45 Aligned_cols=108 Identities=8% Similarity=0.074 Sum_probs=59.9
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEEcCCcchhhhhhcCCCCCCceEEeccCCCCCCCCCCCCCCCCC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENT-NRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDS 82 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~-rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~~~~~~ 82 (473)
+|+||+++..+. || -+.+|.++.... -..+|..+.+..... +.. .....|+.+..+|.. .
T Consensus 87 ~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~~~a-~~~-~A~~~gIp~~~~~~~-------~------- 147 (287)
T 3nrb_A 87 DRKKVVIMVSKF-DH--CLGDLLYRHRLGELDMEVVGIISNHPRE-ALS-VSLVGDIPFHYLPVT-------P------- 147 (287)
T ss_dssp CCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSCGG-GCC-CCCCTTSCEEECCCC-------G-------
T ss_pred CCcEEEEEEeCC-Cc--CHHHHHHHHHCCCCCeEEEEEEeCChHH-HHH-HHHHcCCCEEEEecc-------C-------
Confidence 577998888766 44 344555555441 235766665433221 221 111145565554411 0
Q ss_pred CCCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCc-chHHHHHHHhCCcEEEEccc
Q 043168 83 LPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFF-AWSAEIAQEYGIFNALFVGG 147 (473)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~-~~~~~~A~~~giP~v~~~~~ 147 (473)
..-....+.+.+++++. +||+||.-.+. .....+.+.+.-.++-+.++
T Consensus 148 ----------~~r~~~~~~~~~~l~~~-------~~Dlivlagym~il~~~~l~~~~~~~iNiHpS 196 (287)
T 3nrb_A 148 ----------ATKAAQESQIKNIVTQS-------QADLIVLARYMQILSDDLSAFLSGRCINIHHS 196 (287)
T ss_dssp ----------GGHHHHHHHHHHHHHHH-------TCSEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred ----------cchhhHHHHHHHHHHHh-------CCCEEEhhhhhhhcCHHHHhhccCCeEEECcc
Confidence 00012234567888888 99999976655 35566677777778877543
No 169
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=36.83 E-value=1.8e+02 Score=27.96 Aligned_cols=33 Identities=12% Similarity=0.124 Sum_probs=22.9
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
++||+++..++ ...++++.|.+..|++++++.+
T Consensus 24 ~~~IlIlG~g~-----r~~al~~~~a~~~g~~~v~~~~ 56 (452)
T 2qk4_A 24 AARVLIIGSGG-----REHTLAWKLAQSHHVKQVLVAP 56 (452)
T ss_dssp SEEEEEEECSH-----HHHHHHHHHTTCTTEEEEEEEE
T ss_pred CcEEEEECCCH-----HHHHHHHHHHhcCCCCEEEEEC
Confidence 46899988763 3456788875426898777764
No 170
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=36.38 E-value=50 Score=29.14 Aligned_cols=40 Identities=15% Similarity=0.288 Sum_probs=27.0
Q ss_pred CCCCCceEEEEcCCCcc-----------CHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 1 MAQRKENIVMFPLMAQG-----------HIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~G-----------Hv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
|+ |+||+++.....+ ...=++..-+.|++ .|++|+++++.
T Consensus 1 m~--m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~-aG~~V~iaS~~ 51 (244)
T 3kkl_A 1 MT--PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEK-HGFEVDFVSET 51 (244)
T ss_dssp ----CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHT-TTCEEEEEESS
T ss_pred CC--CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHH-CCCEEEEEeCC
Confidence 55 3588887765322 12346666789999 99999999954
No 171
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=36.25 E-value=1.1e+02 Score=27.12 Aligned_cols=32 Identities=16% Similarity=-0.006 Sum_probs=23.3
Q ss_pred CCeEEE-eCCCcc-hHHHHHHHhCCcEEEEcccc
Q 043168 117 KPVCII-ADMFFA-WSAEIAQEYGIFNALFVGGG 148 (473)
Q Consensus 117 ~pDlVI-~D~~~~-~~~~~A~~~giP~v~~~~~~ 148 (473)
.||+|| .|...- .+..=|..+|||.|.+.-+.
T Consensus 158 ~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 158 LPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 688666 565433 56778999999999985443
No 172
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=36.11 E-value=48 Score=32.78 Aligned_cols=41 Identities=7% Similarity=-0.064 Sum_probs=34.2
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCC-CcEEEEEcCCcchhhh
Q 043168 8 IVMFPLMAQGHIIPFLALALHLENTN-RYTITFVNTPSNLKKL 49 (473)
Q Consensus 8 Il~~~~~~~GHv~P~l~LA~~L~~~r-Gh~Vt~~~~~~~~~~v 49 (473)
+++...|+.|-..=.+.+|..+.. . |..|.|++.+.....+
T Consensus 245 ~li~G~pG~GKT~lal~~a~~~a~-~~g~~vl~~s~E~s~~~l 286 (503)
T 1q57_A 245 IMVTSGSGMVMSTFVRQQALQWGT-AMGKKVGLAMLEESVEET 286 (503)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHTT-TSCCCEEEEESSSCHHHH
T ss_pred EEEeecCCCCchHHHHHHHHHHHH-hcCCcEEEEeccCCHHHH
Confidence 566777899999999999999987 7 9999999987765544
No 173
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=35.80 E-value=1.6e+02 Score=28.49 Aligned_cols=38 Identities=8% Similarity=0.040 Sum_probs=25.7
Q ss_pred CCCC-CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 1 MAQR-KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 1 m~~~-~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
|+.+ ++|||++.. |. -.+.+++++++ .|++|+.+.+..
T Consensus 1 m~~~~~k~ILI~g~---g~--~~~~i~~a~~~-~G~~vv~v~~~~ 39 (461)
T 2dzd_A 1 METRRIRKVLVANR---GE--IAIRVFRACTE-LGIRTVAIYSKE 39 (461)
T ss_dssp --CCCCSEEEECSC---HH--HHHHHHHHHHH-HTCEEEEEECGG
T ss_pred CCCCcCcEEEEECC---cH--HHHHHHHHHHH-cCCEEEEEECCc
Confidence 5443 457888742 32 25688999999 999998887543
No 174
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=35.78 E-value=26 Score=32.29 Aligned_cols=42 Identities=10% Similarity=0.191 Sum_probs=32.1
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhh
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
.++||+++..|+.|- .+|..|.+ .||+|+++..+...+.+..
T Consensus 18 ~~~kI~IiGaGa~G~-----~~a~~L~~-~G~~V~l~~~~~~~~~i~~ 59 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGC-----YYGGMLAR-AGHEVILIARPQHVQAIEA 59 (318)
T ss_dssp --CEEEEESCSHHHH-----HHHHHHHH-TTCEEEEECCHHHHHHHHH
T ss_pred cCCcEEEECcCHHHH-----HHHHHHHH-CCCeEEEEEcHhHHHHHHh
Confidence 356999999888884 67899999 9999999955545566655
No 175
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=35.75 E-value=27 Score=33.36 Aligned_cols=34 Identities=21% Similarity=0.461 Sum_probs=25.5
Q ss_pred HHhhcccccceeeeccChhhHHHHHhc----CC-CEEeccc
Q 043168 340 VEILSHKSISAFLSHCGWNSVLEALSH----GV-PIIGWPL 375 (473)
Q Consensus 340 ~~lL~~~~~~~~I~HgG~gs~~eal~~----Gv-P~i~~P~ 375 (473)
..+-.. ++++|+=||=||+..|+.. ++ |++++..
T Consensus 109 ~~~~~~--~DlVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 109 QDIVNR--TDLLVTLGGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp HHHHHH--CSEEEEEESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred hhcccC--CCEEEEEeCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 344444 4589999999999999653 67 7998853
No 176
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=35.74 E-value=34 Score=31.50 Aligned_cols=39 Identities=18% Similarity=0.204 Sum_probs=31.7
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhh
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
+||+++..|+.|- .+|..|.+ .||+|+++.... .+.+..
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~-~g~~V~~~~r~~-~~~i~~ 41 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAK-TGHCVSVVSRSD-YETVKA 41 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHH-TTCEEEEECSTT-HHHHHH
T ss_pred CEEEEECcCHHHH-----HHHHHHHh-CCCeEEEEeCCh-HHHHHh
Confidence 4999999888885 57889999 999999998655 366665
No 177
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=35.45 E-value=2.5e+02 Score=25.34 Aligned_cols=106 Identities=8% Similarity=0.070 Sum_probs=61.8
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhC-CCcEEEEEcC-C-cchhhhhhcCCCCCCceEEeccCCCCCCCCCCCCCC
Q 043168 3 QRKENIVMFPLMAQGHIIPFLALALHLENT-NRYTITFVNT-P-SNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTEN 79 (473)
Q Consensus 3 ~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~-rGh~Vt~~~~-~-~~~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~~~ 79 (473)
.+|+||+++..+. || -+.+|.++.... -..+|..+.+ . ......+. .|+.+..+|.. . .
T Consensus 93 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~-----~gIp~~~~~~~-----~-~---- 154 (292)
T 3lou_A 93 AARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQ-----HGLPFRHFPIT-----A-D---- 154 (292)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHH-----TTCCEEECCCC-----S-S----
T ss_pred CCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHH-----cCCCEEEeCCC-----c-C----
Confidence 3567998888665 54 345555555441 2467666553 2 34444555 45566655511 0 0
Q ss_pred CCCCCCCCchHHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCc-chHHHHHHHhCCcEEEEccc
Q 043168 80 SDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFF-AWSAEIAQEYGIFNALFVGG 147 (473)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~-~~~~~~A~~~giP~v~~~~~ 147 (473)
.+ ....+.+.+++++. +||+||.-.+. .....+...+.-.++-+.++
T Consensus 155 ---------~r-----~~~~~~~~~~l~~~-------~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 202 (292)
T 3lou_A 155 ---------TK-----AQQEAQWLDVFETS-------GAELVILARYMQVLSPEASARLANRAINIHHS 202 (292)
T ss_dssp ---------CH-----HHHHHHHHHHHHHH-------TCSEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred ---------CH-----HHHHHHHHHHHHHh-------CCCEEEecCchhhCCHHHHhhhcCCeEEeCCC
Confidence 00 12234567888888 99999976655 35556667777777877543
No 178
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=35.41 E-value=46 Score=33.56 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=37.4
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchh
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLK 47 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~ 47 (473)
.+.+|++.+.++-.|-....-++..|.. +|++|++++.....+
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~-~G~eVi~LG~~vP~e 139 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQC-NNYEIVDLGVMVPAE 139 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHT-TTCEEEECCSSBCHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHH-CCCEEEECCCCCCHH
Confidence 3569999999999999999999999999 999999988654333
No 179
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=35.40 E-value=93 Score=28.29 Aligned_cols=28 Identities=14% Similarity=0.115 Sum_probs=23.9
Q ss_pred cceeeeccChhhHHHHHh------cCCCEEeccc
Q 043168 348 ISAFLSHCGWNSVLEALS------HGVPIIGWPL 375 (473)
Q Consensus 348 ~~~~I~HgG~gs~~eal~------~GvP~i~~P~ 375 (473)
.+.+|.-||=||+.|++. .++|+-++|.
T Consensus 64 ~d~vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 64 VDLIIVFGGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp CSEEEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred CCEEEEEccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 457999999999999865 5789999997
No 180
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=35.39 E-value=1.6e+02 Score=27.38 Aligned_cols=17 Identities=6% Similarity=0.051 Sum_probs=14.3
Q ss_pred CccCHHHHHHHHHHHHc
Q 043168 402 CEVSKENLSAKFELVMN 418 (473)
Q Consensus 402 ~~~~~~~l~~ai~~~l~ 418 (473)
..++++.|.++++++|.
T Consensus 324 ~g~~~~~I~~~i~~~l~ 340 (341)
T 2ozl_B 324 SIPQVKDIIFAIKKTLN 340 (341)
T ss_dssp TSCCHHHHHHHHHHHHT
T ss_pred hCcCHHHHHHHHHHHhc
Confidence 56899999999998874
No 181
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=35.22 E-value=23 Score=35.10 Aligned_cols=35 Identities=14% Similarity=0.398 Sum_probs=28.6
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
.|+||+++..+..| +.+|+.|.. .|++||++....
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~-~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDT-KKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCT-TTCEEEEEESSS
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhh-CCCcEEEECCCC
Confidence 46799999877655 578999999 999999998654
No 182
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=35.06 E-value=2.2e+02 Score=24.46 Aligned_cols=44 Identities=11% Similarity=0.031 Sum_probs=29.3
Q ss_pred eEEecccCh-HHhh-cccccceeeeccChhhHHHHH---------hcCCCEEeccc
Q 043168 331 LVVQKWAPQ-VEIL-SHKSISAFLSHCGWNSVLEAL---------SHGVPIIGWPL 375 (473)
Q Consensus 331 v~~~~~~p~-~~lL-~~~~~~~~I~HgG~gs~~eal---------~~GvP~i~~P~ 375 (473)
+.+....+. ..++ ..++ ..++--||.||+-|.. .+++|++.+-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sd-a~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAE-AFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCS-EEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCC-EEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 445455543 3333 3444 3678899999988776 57999998863
No 183
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=34.47 E-value=37 Score=30.39 Aligned_cols=43 Identities=9% Similarity=0.057 Sum_probs=33.7
Q ss_pred CCceEEEEcCC---CccCHHHHHHHHHHHHhCCCcEEEEEcCCcchh
Q 043168 4 RKENIVMFPLM---AQGHIIPFLALALHLENTNRYTITFVNTPSNLK 47 (473)
Q Consensus 4 ~~~~Il~~~~~---~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~ 47 (473)
+.+|.+|++.+ +.|-=.-.-.|+..|++ ||++|+..--+++..
T Consensus 21 ~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~-~G~~Vt~~K~DPYlN 66 (295)
T 2vo1_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKS-CGLHVTSIKIDPYIN 66 (295)
T ss_dssp CCCEEEEEEECSSSSSSHHHHHHHHHHHHHH-TTCCEEEEEEECSSC
T ss_pred ccceEEEEcCCcccccccHHHHHHHHHHHHH-CCCcceeeeccccee
Confidence 45589999876 56666677889999999 999999988665443
No 184
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=34.29 E-value=1.8e+02 Score=26.85 Aligned_cols=126 Identities=13% Similarity=0.141 Sum_probs=66.6
Q ss_pred ceEEEEecCcccCCHHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChHH
Q 043168 263 SVIYVSFGSQNTIAASQMMQLAMALEAC-GKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVE 341 (473)
Q Consensus 263 ~~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 341 (473)
.+.+|++|.++ ...+.++... +..++.+..... + ....+.++. ++ ..+-...+
T Consensus 7 ~vgiiG~G~~g-------~~~~~~l~~~~~~~lvav~d~~~------~------~~~~~~~~~-----g~--~~~~~~~~ 60 (354)
T 3db2_A 7 GVAAIGLGRWA-------YVMADAYTKSEKLKLVTCYSRTE------D------KREKFGKRY-----NC--AGDATMEA 60 (354)
T ss_dssp EEEEECCSHHH-------HHHHHHHTTCSSEEEEEEECSSH------H------HHHHHHHHH-----TC--CCCSSHHH
T ss_pred eEEEEccCHHH-------HHHHHHHHhCCCcEEEEEECCCH------H------HHHHHHHHc-----CC--CCcCCHHH
Confidence 37788888765 3456666665 566555543220 0 111222222 11 12556688
Q ss_pred hhcccccceeeeccC----hhhHHHHHhcCCCEEe-ccccc--chhhh-HHHHHHHHcceEEEecccCCccCHHHHHHHH
Q 043168 342 ILSHKSISAFLSHCG----WNSVLEALSHGVPIIG-WPLAA--EQFYN-SKLLEEVIGVCVEVARGMNCEVSKENLSAKF 413 (473)
Q Consensus 342 lL~~~~~~~~I~HgG----~gs~~eal~~GvP~i~-~P~~~--DQ~~~-a~~v~~~lG~G~~l~~~~~~~~~~~~l~~ai 413 (473)
++..+++++++.--- .-.+.+|+.+|+++++ -|+.. ++-.- .+..++. |+-+.+.. ...+.+ ..+.+
T Consensus 61 ~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~-~~~~~v~~--~~R~~p--~~~~~ 135 (354)
T 3db2_A 61 LLAREDVEMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKET-GVKFLCGH--SSRRLG--ALRKM 135 (354)
T ss_dssp HHHCSSCCEEEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHH-CCCEEEEC--GGGGSH--HHHHH
T ss_pred HhcCCCCCEEEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHc-CCeEEEee--chhcCH--HHHHH
Confidence 886666666664332 3346788999999887 46543 33333 3334444 76666654 123333 33444
Q ss_pred HHHHcC
Q 043168 414 ELVMNE 419 (473)
Q Consensus 414 ~~~l~~ 419 (473)
++++.+
T Consensus 136 k~~i~~ 141 (354)
T 3db2_A 136 KEMIDT 141 (354)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 555544
No 185
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=34.26 E-value=22 Score=30.76 Aligned_cols=33 Identities=18% Similarity=0.165 Sum_probs=26.2
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
+++||.|+..|..|. .+|..|.+ .||+|+++..
T Consensus 22 ~mmkI~IIG~G~mG~-----~la~~l~~-~g~~V~~v~~ 54 (220)
T 4huj_A 22 SMTTYAIIGAGAIGS-----ALAERFTA-AQIPAIIANS 54 (220)
T ss_dssp GSCCEEEEECHHHHH-----HHHHHHHH-TTCCEEEECT
T ss_pred cCCEEEEECCCHHHH-----HHHHHHHh-CCCEEEEEEC
Confidence 456899998776664 68899999 9999998553
No 186
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=33.98 E-value=33 Score=32.50 Aligned_cols=36 Identities=19% Similarity=0.261 Sum_probs=28.6
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
|++.+.+|+++..+-.| +.+|..|++ +|++|+++=-
T Consensus 1 M~~~~~~V~IVGaG~aG-----l~~A~~L~~-~G~~v~v~E~ 36 (397)
T 2vou_A 1 MSPTTDRIAVVGGSISG-----LTAALMLRD-AGVDVDVYER 36 (397)
T ss_dssp -CCCCSEEEEECCSHHH-----HHHHHHHHH-TTCEEEEECS
T ss_pred CCCCCCcEEEECCCHHH-----HHHHHHHHh-CCCCEEEEec
Confidence 77677799999877444 678999999 9999999963
No 187
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=33.62 E-value=30 Score=32.20 Aligned_cols=33 Identities=18% Similarity=0.183 Sum_probs=26.3
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
+++||+++..|..|. .+|..|.+ .||+|+++..
T Consensus 3 ~~mki~iiG~G~~G~-----~~a~~L~~-~g~~V~~~~r 35 (359)
T 1bg6_A 3 ESKTYAVLGLGNGGH-----AFAAYLAL-KGQSVLAWDI 35 (359)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHHH-TTCEEEEECS
T ss_pred CcCeEEEECCCHHHH-----HHHHHHHh-CCCEEEEEeC
Confidence 346999998877774 47888999 9999998864
No 188
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=33.60 E-value=37 Score=30.53 Aligned_cols=33 Identities=3% Similarity=0.151 Sum_probs=26.2
Q ss_pred CCceEEEEcC-CCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 4 RKENIVMFPL-MAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 4 ~~~~Il~~~~-~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
++++|.|+.. |..|. .+|..|.+ .||+|+++..
T Consensus 10 mmm~I~iIG~tG~mG~-----~la~~l~~-~g~~V~~~~r 43 (286)
T 3c24_A 10 GPKTVAILGAGGKMGA-----RITRKIHD-SAHHLAAIEI 43 (286)
T ss_dssp CCCEEEEETTTSHHHH-----HHHHHHHH-SSSEEEEECC
T ss_pred cCCEEEEECCCCHHHH-----HHHHHHHh-CCCEEEEEEC
Confidence 3469999988 77774 57889999 9999997763
No 189
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=33.54 E-value=31 Score=30.91 Aligned_cols=43 Identities=16% Similarity=0.034 Sum_probs=36.5
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHH--------HHhCC-CcEEEEEcCCcchh
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALH--------LENTN-RYTITFVNTPSNLK 47 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~--------L~~~r-Gh~Vt~~~~~~~~~ 47 (473)
++.+|++.+.++-.|-....-++.. |.. . |++|+++......+
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~-~~G~eVi~LG~~vp~e 170 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLER-YEMIDAYNLGSQVANE 170 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGG-CTTEEEEECCSSBCHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHh-cCCcEEEECCCCCCHH
Confidence 4568999999999999999999988 999 9 99999988644333
No 190
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=33.09 E-value=31 Score=25.71 Aligned_cols=33 Identities=21% Similarity=0.278 Sum_probs=24.0
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCC-cEEEEEcC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNR-YTITFVNT 42 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rG-h~Vt~~~~ 42 (473)
++++|+++..+..| ..+++.|.+ +| |+|+.+..
T Consensus 4 ~~~~v~I~G~G~iG-----~~~~~~l~~-~g~~~v~~~~r 37 (118)
T 3ic5_A 4 MRWNICVVGAGKIG-----QMIAALLKT-SSNYSVTVADH 37 (118)
T ss_dssp TCEEEEEECCSHHH-----HHHHHHHHH-CSSEEEEEEES
T ss_pred CcCeEEEECCCHHH-----HHHHHHHHh-CCCceEEEEeC
Confidence 34588887554444 367899999 99 99888764
No 191
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=33.02 E-value=31 Score=31.35 Aligned_cols=41 Identities=15% Similarity=0.263 Sum_probs=29.5
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC-cchhhhhh
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP-SNLKKLKS 51 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~-~~~~~v~~ 51 (473)
++||+|+..|..|. .+|..|.+ .||+|+++... ...+.+..
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~-~g~~V~~~~r~~~~~~~~~~ 44 (316)
T 2ew2_A 3 AMKIAIAGAGAMGS-----RLGIMLHQ-GGNDVTLIDQWPAHIEAIRK 44 (316)
T ss_dssp -CEEEEECCSHHHH-----HHHHHHHH-TTCEEEEECSCHHHHHHHHH
T ss_pred CCeEEEECcCHHHH-----HHHHHHHh-CCCcEEEEECCHHHHHHHHh
Confidence 35899998877775 57899999 99999998743 23334444
No 192
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=32.91 E-value=40 Score=26.78 Aligned_cols=35 Identities=11% Similarity=0.125 Sum_probs=28.8
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
.++++++.++ =+.|++.+++.|.+ +|.+|+++ ...
T Consensus 19 ~~~llIaGG~--GiaPl~sm~~~l~~-~~~~v~l~-g~R 53 (142)
T 3lyu_A 19 GKILAIGAYT--GIVEVYPIAKAWQE-IGNDVTTL-HVT 53 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHH-TTCEEEEE-EEE
T ss_pred CeEEEEECcC--cHHHHHHHHHHHHh-cCCcEEEE-EeC
Confidence 4788888665 37999999999999 99999988 544
No 193
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=32.63 E-value=25 Score=32.22 Aligned_cols=37 Identities=16% Similarity=0.259 Sum_probs=27.3
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
|++.+.+|+++..+..| +..|..|.+ +|++|+++-..
T Consensus 1 m~~~~~~vvIIG~G~aG-----l~aA~~l~~-~g~~v~lie~~ 37 (335)
T 2zbw_A 1 MAADHTDVLIVGAGPTG-----LFAGFYVGM-RGLSFRFVDPL 37 (335)
T ss_dssp --CCEEEEEEECCSHHH-----HHHHHHHHH-TTCCEEEEESS
T ss_pred CCCCcCcEEEECCCHHH-----HHHHHHHHh-CCCCEEEEeCC
Confidence 66566789888776554 567888999 99999999754
No 194
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=32.51 E-value=24 Score=32.09 Aligned_cols=28 Identities=18% Similarity=0.149 Sum_probs=23.8
Q ss_pred cceeeeccChhhHHHHHhc----CCCEEeccc
Q 043168 348 ISAFLSHCGWNSVLEALSH----GVPIIGWPL 375 (473)
Q Consensus 348 ~~~~I~HgG~gs~~eal~~----GvP~i~~P~ 375 (473)
++++|+=||=||+.+++.. ++|+++++.
T Consensus 64 ~D~vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 64 ADLAVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp CSEEEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred CCEEEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 4589999999999999843 789999973
No 195
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=32.47 E-value=44 Score=30.63 Aligned_cols=34 Identities=9% Similarity=0.110 Sum_probs=27.8
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcc
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSN 45 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~ 45 (473)
+++|+++..+ ....+++++++ +||+|.++.....
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~-~G~~v~~~~~~~~ 35 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKD-EGFETIAFGSSKV 35 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHH-TTCCEEEESCGGG
T ss_pred ceEEEEECCh------hHHHHHHHHHh-CCCEEEEEECCCC
Confidence 4589998876 46788999999 9999999986644
No 196
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=32.42 E-value=1.8e+02 Score=24.42 Aligned_cols=43 Identities=16% Similarity=0.070 Sum_probs=27.6
Q ss_pred EEecccCh-HH-hhcccccceeeeccChhhHHHHH---------hcCCCEEeccc
Q 043168 332 VVQKWAPQ-VE-ILSHKSISAFLSHCGWNSVLEAL---------SHGVPIIGWPL 375 (473)
Q Consensus 332 ~~~~~~p~-~~-lL~~~~~~~~I~HgG~gs~~eal---------~~GvP~i~~P~ 375 (473)
+.+++... .. .+.+++ ..++--||.||+-|.. .+++|++.+-.
T Consensus 93 i~~~~~~~Rk~~m~~~sd-a~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~ 146 (189)
T 3sbx_A 93 VVTETMWERKQVMEDRAN-AFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDP 146 (189)
T ss_dssp EEESSHHHHHHHHHHHCS-EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred EEcCCHHHHHHHHHHHCC-EEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecC
Confidence 34454443 22 334445 3677889999998874 35899998853
No 197
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=32.23 E-value=1.8e+02 Score=29.09 Aligned_cols=79 Identities=14% Similarity=0.109 Sum_probs=45.7
Q ss_pred HHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccC-hHHhhc-------cccccee
Q 043168 280 MMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAP-QVEILS-------HKSISAF 351 (473)
Q Consensus 280 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~lL~-------~~~~~~~ 351 (473)
-+.+++.|.+.|++.++.+.+.. ...+.+.+.+ .++....-.. +.+.+. .....++
T Consensus 14 a~~l~~~L~~~GV~~vfg~PG~~--------------~~~l~~al~~--~~i~~v~~~~E~~Aa~~A~Gyar~tg~p~v~ 77 (566)
T 1ozh_A 14 ADLVVSQLEAQGVRQVFGIPGAK--------------IDKVFDSLLD--SSIRIIPVRHEANAAFMAAAVGRITGKAGVA 77 (566)
T ss_dssp HHHHHHHHHHHTCCEEEEECCTT--------------THHHHHHGGG--SSSEEEECSSHHHHHHHHHHHHHHHSSCEEE
T ss_pred HHHHHHHHHHCCCCEEEEcCCCc--------------hHHHHHHHHh--CCCcEEEeCCHHHHHHHHHHHHHHHCCCEEE
Confidence 45677888888888888776541 1233333321 1222211111 111110 1234578
Q ss_pred eeccCh------hhHHHHHhcCCCEEecc
Q 043168 352 LSHCGW------NSVLEALSHGVPIIGWP 374 (473)
Q Consensus 352 I~HgG~------gs~~eal~~GvP~i~~P 374 (473)
++|.|- +.++||-+.++|+|++-
T Consensus 78 ~~TsGpG~~N~~~~l~~A~~~~vPll~it 106 (566)
T 1ozh_A 78 LVTSGPGCSNLITGMATANSEGDPVVALG 106 (566)
T ss_dssp EECSTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred EEccChHHHHHHHHHHHHHhcCCCEEEEe
Confidence 899996 57889999999999974
No 198
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=32.12 E-value=66 Score=30.10 Aligned_cols=30 Identities=13% Similarity=0.170 Sum_probs=21.2
Q ss_pred ccccceeeec-cChhhHHHHHhcCCCEEecccc
Q 043168 345 HKSISAFLSH-CGWNSVLEALSHGVPIIGWPLA 376 (473)
Q Consensus 345 ~~~~~~~I~H-gG~gs~~eal~~GvP~i~~P~~ 376 (473)
+++ ++|+| .+......|-..|+|.+.+-+.
T Consensus 114 ~PD--~Vv~~~~~~~~~~aa~~~giP~v~~~~~ 144 (391)
T 3tsa_A 114 RPS--VLLVDVCALIGRVLGGLLDLPVVLHRWG 144 (391)
T ss_dssp CCS--EEEEETTCHHHHHHHHHTTCCEEEECCS
T ss_pred CCC--EEEeCcchhHHHHHHHHhCCCEEEEecC
Confidence 455 56666 6666677788899999887443
No 199
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=31.79 E-value=2.4e+02 Score=23.90 Aligned_cols=70 Identities=16% Similarity=0.049 Sum_probs=47.6
Q ss_pred eeeeccChhhHH----------------HHHhcCCCEEeccc----ccchhhhHHHHHHHHcceEEEecc------c--C
Q 043168 350 AFLSHCGWNSVL----------------EALSHGVPIIGWPL----AAEQFYNSKLLEEVIGVCVEVARG------M--N 401 (473)
Q Consensus 350 ~~I~HgG~gs~~----------------eal~~GvP~i~~P~----~~DQ~~~a~~v~~~lG~G~~l~~~------~--~ 401 (473)
.+|.-|-+||+. .+|..+.|+|++|- .+..+.|..++.+. |+=+..... + +
T Consensus 90 mvIaP~TanTlAkiA~GiaDnLlt~aa~~~Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~~-G~~i~~P~~~~~~~~~p~s 168 (201)
T 3lqk_A 90 MVIAPMTGNSTSKFANAMTDSPVLMGAKATLRNGKPVVVGISTNDALGLNGINIMRLMAT-KNIYFIPFGQDNPQVKPNS 168 (201)
T ss_dssp EEEEEECHHHHHHHHTTCCCSHHHHHHHHHHHTTCCEEEEEEETTTTTTTHHHHHHHHTS-TTEEECCEEESCTTTCTTC
T ss_pred EEEccCCHHHHHHHHCcccCcHHHHHHHHHhhcCCCEEEEECCChhHHHhHHHHHHHHHC-CCEEECCCCccccccCCCc
Confidence 677777777654 23567999999995 46777799999866 865443331 0 1
Q ss_pred CccCHHHHHHHHHHHHcCC
Q 043168 402 CEVSKENLSAKFELVMNET 420 (473)
Q Consensus 402 ~~~~~~~l~~ai~~~l~~~ 420 (473)
-..+.+.|.+.|.++|++.
T Consensus 169 ~~a~~~~i~~tv~~al~~~ 187 (201)
T 3lqk_A 169 LVARMEALPETIEAALRGQ 187 (201)
T ss_dssp EEECGGGHHHHHHHHHTTC
T ss_pred ccCCHHHHHHHHHHHHhcC
Confidence 1234578999999998764
No 200
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=31.41 E-value=1.1e+02 Score=27.05 Aligned_cols=39 Identities=15% Similarity=0.296 Sum_probs=30.2
Q ss_pred CceEEEEecCcccCCHHHHHHHHHHHHh--CCCcEEEEEcC
Q 043168 262 NSVIYVSFGSQNTIAASQMMQLAMALEA--CGKNFIWVVKP 300 (473)
Q Consensus 262 ~~~V~vs~GS~~~~~~~~~~~~~~al~~--~~~~~i~~~~~ 300 (473)
+.+|+|++||......+.+..+.+.++. .++.|-|....
T Consensus 10 ~aillv~hGS~~~~~~~~~~~~~~~l~~~~~~~~V~~af~~ 50 (269)
T 2xvy_A 10 TGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTA 50 (269)
T ss_dssp EEEEEEECCCCCTTTTHHHHHHHHHHHHHCTTSCEEEEESC
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHHHHHCCCCeEEeehhh
Confidence 4699999999876666688888888876 46778887653
No 201
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=31.20 E-value=81 Score=32.80 Aligned_cols=115 Identities=6% Similarity=-0.008 Sum_probs=73.8
Q ss_pred EecccChHHhhcccccceeeeccChhhHHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEec--ccCCccCHHHHH
Q 043168 333 VQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVAR--GMNCEVSKENLS 410 (473)
Q Consensus 333 ~~~~~p~~~lL~~~~~~~~I~HgG~gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~--~~~~~~~~~~l~ 410 (473)
+.++.+-.++|..++ ++||=- ...+.|.+..++|+|......|+...- .+ |.=..... -...--+.++|.
T Consensus 603 ~~~~~di~~ll~~aD--~lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~----~r-g~y~d~~~~~pg~~~~~~~eL~ 674 (729)
T 3l7i_A 603 VSNYNDVSELFLISD--CLITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG----LR-GFYMNYMEDLPGPIYTEPYGLA 674 (729)
T ss_dssp CTTCSCHHHHHHTCS--EEEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS----CC-SBSSCTTSSSSSCEESSHHHHH
T ss_pred CCCCcCHHHHHHHhC--EEEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc----cC-CcccChhHhCCCCeECCHHHHH
Confidence 334556678898866 799864 447789999999999988776665421 02 32111110 001234778888
Q ss_pred HHHHHHHcCChhhHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHH
Q 043168 411 AKFELVMNETEKGMDLRKKASEVEMIIKNAVRNEEKFKGSSVKAMEQFLDAAL 463 (473)
Q Consensus 411 ~ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~ 463 (473)
++|.....+. ..|+++.+++.+.+-.. .+|.++.+.++.+++...
T Consensus 675 ~~i~~~~~~~---~~~~~~~~~~~~~~~~~-----~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 675 KELKNLDKVQ---QQYQEKIDAFYDRFCSV-----DNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHHTTHHHHH---HHTHHHHHHHHHHHSTT-----CCSCHHHHHHHHHHHHHH
T ss_pred HHHhhhhccc---hhHHHHHHHHHHHhCCc-----cCChHHHHHHHHHHhcCc
Confidence 8888776532 15777777887777544 567777777777776543
No 202
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=31.06 E-value=82 Score=27.55 Aligned_cols=37 Identities=8% Similarity=0.170 Sum_probs=27.2
Q ss_pred ceEEEEcCCCc-----------cCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 6 ENIVMFPLMAQ-----------GHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 6 ~~Il~~~~~~~-----------GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
+||+++..... -...=+....+.|.+ .|++|+++++.
T Consensus 4 ~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~-ag~~v~~~s~~ 51 (243)
T 1rw7_A 4 KKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRK-EGFEVDFVSET 51 (243)
T ss_dssp CEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHH-TTCEEEEECSS
T ss_pred ceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHH-CCCEEEEECCC
Confidence 58888775422 134556677889999 99999999965
No 203
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=30.90 E-value=88 Score=21.86 Aligned_cols=48 Identities=19% Similarity=0.293 Sum_probs=34.6
Q ss_pred cCCCEEecccccchhhhHH---HHHHHHcceEEEecccCCccCHHHHHHHHHHHHc
Q 043168 366 HGVPIIGWPLAAEQFYNSK---LLEEVIGVCVEVARGMNCEVSKENLSAKFELVMN 418 (473)
Q Consensus 366 ~GvP~i~~P~~~DQ~~~a~---~v~~~lG~G~~l~~~~~~~~~~~~l~~ai~~~l~ 418 (473)
.|+|++++--...|.+.-. ...+. |+...+-+ .-+++++.+.+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakke-gvsydvlk----stdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVLK----STDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEEE----CCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhc-Ccchhhhc----cCCHHHHHHHHHHHHH
Confidence 6899988877666665442 23344 77777764 6789999999998874
No 204
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=30.82 E-value=25 Score=32.29 Aligned_cols=28 Identities=25% Similarity=0.341 Sum_probs=24.2
Q ss_pred cceeeeccChhhHHHHHhc----CCCEEeccc
Q 043168 348 ISAFLSHCGWNSVLEALSH----GVPIIGWPL 375 (473)
Q Consensus 348 ~~~~I~HgG~gs~~eal~~----GvP~i~~P~ 375 (473)
++++|.-||=||+.+++.. ++|+++++.
T Consensus 76 ~d~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 76 CELVLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp CCCEEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCEEEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 4589999999999999754 899999974
No 205
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=30.79 E-value=80 Score=29.34 Aligned_cols=72 Identities=8% Similarity=0.077 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChHHhhcccccceeeecc
Q 043168 276 AASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHC 355 (473)
Q Consensus 276 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~~~I~Hg 355 (473)
..+..+.+.+++.+..++.||.+..+. .-.++.++++...+-+++. .||-+.
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~--------------------------g~~rlL~~lD~~~i~~~PK--~~~GyS 115 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGGM--------------------------NSNSLLPYIDYDAFQNNPK--IMIGYS 115 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS--------------------------CGGGGGGGSCHHHHHHSCC--EEEECG
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccc--------------------------cHHHHhhhcChhHHhhCCe--EEEEec
Confidence 345677788999888899999887662 1112346666666555665 688777
Q ss_pred ChhhHHHHHh--cCCCEEeccc
Q 043168 356 GWNSVLEALS--HGVPIIGWPL 375 (473)
Q Consensus 356 G~gs~~eal~--~GvP~i~~P~ 375 (473)
-...++-+++ .|++.+.-|.
T Consensus 116 DiTaL~~al~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 116 DATALLLGIYAKTGIPTFYGPA 137 (336)
T ss_dssp GGHHHHHHHHHHHCCCEEECCC
T ss_pred hHHHHHHHHHHhcCceEEECCh
Confidence 7777777776 5787777775
No 206
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=30.69 E-value=63 Score=31.77 Aligned_cols=50 Identities=16% Similarity=0.152 Sum_probs=33.8
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhhcCCCCCCceEEecc
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIP 65 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~ip 65 (473)
++|-+|++. .+=.-++.+|+.|.+ .|+++. ++....+.++. .|+.+..+.
T Consensus 9 ~i~~aLISV---sDK~glvelAk~L~~-lGfeI~--ATgGTak~L~e-----~GI~v~~V~ 58 (523)
T 3zzm_A 9 PIRRALISV---YDKTGLVDLAQGLSA-AGVEII--STGSTAKTIAD-----TGIPVTPVE 58 (523)
T ss_dssp CCCEEEEEE---SSCTTHHHHHHHHHH-TTCEEE--ECHHHHHHHHT-----TTCCCEEHH
T ss_pred cccEEEEEE---eccccHHHHHHHHHH-CCCEEE--EcchHHHHHHH-----cCCceeecc
Confidence 334455554 355668999999999 999875 55666777877 445665553
No 207
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=30.61 E-value=39 Score=29.29 Aligned_cols=37 Identities=11% Similarity=0.005 Sum_probs=32.6
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 7 NIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 7 ~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
||+|..-|+-|-..=...||..|++ +|++|.++-...
T Consensus 2 kI~vs~kGGvGKTt~a~~LA~~la~-~g~~VlliD~D~ 38 (254)
T 3kjh_A 2 KLAVAGKGGVGKTTVAAGLIKIMAS-DYDKIYAVDGDP 38 (254)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTT-TCSCEEEEEECT
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHH-CCCeEEEEeCCC
Confidence 6888777899999999999999999 999999987543
No 208
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=30.42 E-value=30 Score=27.20 Aligned_cols=34 Identities=12% Similarity=0.139 Sum_probs=27.4
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
+.||+++.++..|. .+|+.|.+ .||+|+++....
T Consensus 7 ~~~viIiG~G~~G~-----~la~~L~~-~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGS-----LLGEKLLA-SDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHH-----HHHHHHHH-TTCCEEEEESCH
T ss_pred CCCEEEECcCHHHH-----HHHHHHHH-CCCCEEEEECCH
Confidence 45899998776654 78999999 999999998543
No 209
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=30.41 E-value=52 Score=30.38 Aligned_cols=34 Identities=9% Similarity=0.065 Sum_probs=28.4
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
.++||.|+..+..| +-.+|+.|.+ +||+|+..=.
T Consensus 3 ~~~~i~~iGiGg~G----ms~~A~~L~~-~G~~V~~~D~ 36 (326)
T 3eag_A 3 AMKHIHIIGIGGTF----MGGLAAIAKE-AGFEVSGCDA 36 (326)
T ss_dssp CCCEEEEESCCSHH----HHHHHHHHHH-TTCEEEEEES
T ss_pred CCcEEEEEEECHHH----HHHHHHHHHh-CCCEEEEEcC
Confidence 35699999999888 4468999999 9999998754
No 210
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=30.31 E-value=1.9e+02 Score=22.30 Aligned_cols=49 Identities=8% Similarity=-0.094 Sum_probs=30.4
Q ss_pred cCCCEEecccccchhhhHHHHHHHHc-ceEEEecccCCccCHHHHHHHHHHHHcCC
Q 043168 366 HGVPIIGWPLAAEQFYNSKLLEEVIG-VCVEVARGMNCEVSKENLSAKFELVMNET 420 (473)
Q Consensus 366 ~GvP~i~~P~~~DQ~~~a~~v~~~lG-~G~~l~~~~~~~~~~~~l~~ai~~~l~~~ 420 (473)
..+|+|++--..+.. ......+. | +--.+. +.++.+.+..+|+.++...
T Consensus 78 ~~~~ii~ls~~~~~~-~~~~~~~~-g~~~~~l~----kP~~~~~L~~~i~~~~~~~ 127 (154)
T 2rjn_A 78 PDIERVVISGYADAQ-ATIDAVNR-GKISRFLL----KPWEDEDVFKVVEKGLQLA 127 (154)
T ss_dssp TTSEEEEEECGGGHH-HHHHHHHT-TCCSEEEE----SSCCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCCHH-HHHHHHhc-cchheeee----CCCCHHHHHHHHHHHHHHH
Confidence 478888875444432 23333324 5 433444 4689999999999998554
No 211
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=30.20 E-value=73 Score=23.83 Aligned_cols=35 Identities=11% Similarity=0.116 Sum_probs=26.6
Q ss_pred ccCHHHHHHHHHHHHhCC-Cc-EEEEEcCCcchhhhhh
Q 043168 16 QGHIIPFLALALHLENTN-RY-TITFVNTPSNLKKLKS 51 (473)
Q Consensus 16 ~GHv~P~l~LA~~L~~~r-Gh-~Vt~~~~~~~~~~v~~ 51 (473)
.......+.+|..+.+ . || +|.++-.........+
T Consensus 15 ~~~~~~al~~a~~~~~-~~g~~~v~vff~~dgV~~~~~ 51 (117)
T 1jx7_A 15 SESLFNSLRLAIALRE-QESNLDLRLFLMSDAVTAGLR 51 (117)
T ss_dssp CSHHHHHHHHHHHHHH-HCTTCEEEEEECGGGGGGGBS
T ss_pred cHHHHHHHHHHHHHHh-cCCCccEEEEEEchHHHHHhc
Confidence 3446678999999999 8 99 9988887766655543
No 212
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=30.13 E-value=3.3e+02 Score=25.10 Aligned_cols=107 Identities=17% Similarity=0.203 Sum_probs=59.7
Q ss_pred eEEEEecCcccCCHHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChHHh
Q 043168 264 VIYVSFGSQNTIAASQMMQLAMALEAC-GKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEI 342 (473)
Q Consensus 264 ~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~l 342 (473)
+.+|++|.++ ...+.++... +..++.+.... ++... ... ..++ .-|-...++
T Consensus 8 vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~---------------~~~~~-~a~--~~g~--~~~~~~~~l 60 (359)
T 3e18_A 8 LVIVGYGGMG-------SYHVTLASAADNLEVHGVFDIL---------------AEKRE-AAA--QKGL--KIYESYEAV 60 (359)
T ss_dssp EEEECCSHHH-------HHHHHHHHTSTTEEEEEEECSS---------------HHHHH-HHH--TTTC--CBCSCHHHH
T ss_pred EEEECcCHHH-------HHHHHHHHhCCCcEEEEEEcCC---------------HHHHH-HHH--hcCC--ceeCCHHHH
Confidence 7788888776 2344555554 55555444322 11111 111 2233 235567888
Q ss_pred hcccccceeeeccChh----hHHHHHhcCCCEEe-ccccc--chhhh-HHHHHHHHcceEEEec
Q 043168 343 LSHKSISAFLSHCGWN----SVLEALSHGVPIIG-WPLAA--EQFYN-SKLLEEVIGVCVEVAR 398 (473)
Q Consensus 343 L~~~~~~~~I~HgG~g----s~~eal~~GvP~i~-~P~~~--DQ~~~-a~~v~~~lG~G~~l~~ 398 (473)
|..+++++++--.-.. .+.+||.+|+++++ -|+.. ++-.- .+..++. |+-+.+..
T Consensus 61 l~~~~~D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~-g~~~~v~~ 123 (359)
T 3e18_A 61 LADEKVDAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRV-NKHFMVHQ 123 (359)
T ss_dssp HHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHH-TCCEEEEC
T ss_pred hcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHh-CCeEEEEe
Confidence 8877777777544433 36788999999988 56654 33332 3333444 66555543
No 213
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=29.98 E-value=31 Score=31.42 Aligned_cols=33 Identities=9% Similarity=-0.083 Sum_probs=27.0
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
+++||.|+..|..|. .+|..|.+ .||+|+++..
T Consensus 6 ~~~~I~iIG~G~mG~-----~~a~~l~~-~G~~V~~~dr 38 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGM-----GAARSCLR-AGLSTWGADL 38 (303)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHHH-TTCEEEEECS
T ss_pred CCCeEEEECCCHHHH-----HHHHHHHH-CCCeEEEEEC
Confidence 456899998887775 68999999 9999998864
No 214
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=29.96 E-value=28 Score=32.89 Aligned_cols=26 Identities=23% Similarity=0.298 Sum_probs=22.1
Q ss_pred cceeeeccChhhHHHHHh----cCCCEEec
Q 043168 348 ISAFLSHCGWNSVLEALS----HGVPIIGW 373 (473)
Q Consensus 348 ~~~~I~HgG~gs~~eal~----~GvP~i~~ 373 (473)
++++|+=||=||++.|.. .++|++++
T Consensus 109 ~DlvI~lGGDGT~L~aa~~~~~~~~PvlGi 138 (365)
T 3pfn_A 109 IDFIICLGGDGTLLYASSLFQGSVPPVMAF 138 (365)
T ss_dssp CSEEEEESSTTHHHHHHHHCSSSCCCEEEE
T ss_pred CCEEEEEcChHHHHHHHHHhccCCCCEEEE
Confidence 568999999999999976 35898887
No 215
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=29.87 E-value=40 Score=32.83 Aligned_cols=43 Identities=12% Similarity=0.135 Sum_probs=33.2
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhh
Q 043168 7 NIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKL 49 (473)
Q Consensus 7 ~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v 49 (473)
-+++...|+.|-..=++.+|..+....|..|.|++.+.....+
T Consensus 205 liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~s~~~l 247 (454)
T 2r6a_A 205 LIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQL 247 (454)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSSCHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCCCHHHH
Confidence 4677778899999999999988764158899999977654443
No 216
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=29.84 E-value=1.5e+02 Score=27.60 Aligned_cols=34 Identities=12% Similarity=0.297 Sum_probs=23.7
Q ss_pred eEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEc
Q 043168 264 VIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVK 299 (473)
Q Consensus 264 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~ 299 (473)
+++++.|+.+ ...-+..++++|.+.|++|.++++
T Consensus 7 il~~~~~~~G--hv~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 7 ILFANVQGHG--HVYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp EEEECCSSHH--HHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEeCCCCc--ccccHHHHHHHHHhCCCEEEEEcC
Confidence 6777776543 233455688888888998888765
No 217
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=29.25 E-value=2.4e+02 Score=23.23 Aligned_cols=114 Identities=14% Similarity=0.139 Sum_probs=62.8
Q ss_pred CceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEE---ecccC
Q 043168 262 NSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVV---QKWAP 338 (473)
Q Consensus 262 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~~p 338 (473)
+.+++.-.||+.... ...+++.|.+.|+++-++....- . ..+.....+.+. . .++. ..|++
T Consensus 6 k~IllgvTGs~aa~k---~~~ll~~L~~~g~~V~vv~T~~A-------~---~fi~~~~l~~l~--~-~v~~~~~~~~~~ 69 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN---ISHYIIELKSKFDEVNVIASTNG-------R---KFINGEILKQFC--D-NYYDEFEDPFLN 69 (175)
T ss_dssp CEEEEEECSSGGGGG---HHHHHHHHTTTCSEEEEEECTGG-------G---GGSCHHHHHHHC--S-CEECTTTCTTCC
T ss_pred CEEEEEEeCHHHHHH---HHHHHHHHHHCCCEEEEEECcCH-------H---HHhhHHHHHHhc--C-CEEecCCCCccc
Confidence 336665566665432 34566666667777766665441 0 112222222222 1 2221 13466
Q ss_pred hHHhhcccccceeeeccChhhHH-------------HHHhcCCCEEeccccc----ch---hhhHHHHHHHHcce
Q 043168 339 QVEILSHKSISAFLSHCGWNSVL-------------EALSHGVPIIGWPLAA----EQ---FYNSKLLEEVIGVC 393 (473)
Q Consensus 339 ~~~lL~~~~~~~~I~HgG~gs~~-------------eal~~GvP~i~~P~~~----DQ---~~~a~~v~~~lG~G 393 (473)
+.++-..++. .+|.-|-+||+. -+++.++|++++|-.. .. ..|..++.+. |+=
T Consensus 70 hi~l~~~aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~-G~~ 142 (175)
T 3qjg_A 70 HVDIANKHDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKDY-GVS 142 (175)
T ss_dssp HHHHHHTCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHHT-TCE
T ss_pred cccccchhCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHHC-CCE
Confidence 6666666665 677888887665 4578899999999421 22 3455556644 653
No 218
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=29.25 E-value=83 Score=27.47 Aligned_cols=23 Identities=13% Similarity=0.122 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 21 PFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 21 P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
--.++|++|.+ +|++|++++.+.
T Consensus 31 mG~aiA~~~~~-~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 31 LGKIITETLLS-AGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHH-TTCEEEEEECTT
T ss_pred HHHHHHHHHHH-CCCEEEEEeCCc
Confidence 34678999999 999999999663
No 219
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=29.19 E-value=60 Score=25.89 Aligned_cols=33 Identities=18% Similarity=0.191 Sum_probs=25.1
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
..+|+++..+..| ..+|+.|.+ .|++|+++...
T Consensus 19 ~~~v~IiG~G~iG-----~~la~~L~~-~g~~V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIFGCGRLG-----SLIANLASS-SGHSVVVVDKN 51 (155)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHH-TTCEEEEEESC
T ss_pred CCcEEEECCCHHH-----HHHHHHHHh-CCCeEEEEECC
Confidence 4588888655444 457899999 99999988743
No 220
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=28.83 E-value=51 Score=31.29 Aligned_cols=45 Identities=22% Similarity=0.084 Sum_probs=25.5
Q ss_pred hhhhhhccCCCCceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEE
Q 043168 251 SCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWV 297 (473)
Q Consensus 251 ~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 297 (473)
.+.+++...+.+.++.|+-++.. .......+.+.|++.+..+.+.
T Consensus 21 ~l~~~~~~~g~~~~liVtd~~~~--~~g~~~~v~~~L~~~gi~~~~~ 65 (383)
T 3ox4_A 21 KAIKDLNGSGFKNALIVSDAFMN--KSGVVKQVADLLKAQGINSAVY 65 (383)
T ss_dssp HHHHTTTTSCCCEEEEEEEHHHH--HTTHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHcCCCEEEEEECCchh--hCchHHHHHHHHHHcCCeEEEE
Confidence 44455555443445666554432 2235677888888877776443
No 221
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=28.79 E-value=2.9e+02 Score=24.05 Aligned_cols=37 Identities=14% Similarity=-0.072 Sum_probs=26.8
Q ss_pred ceEEEEcCCCccCHH-HHHHHHHHHHhCCCcEEEEEcCC
Q 043168 6 ENIVMFPLMAQGHII-PFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~-P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
+||+++-.-+.-+++ .+...++.+.. .|.+|.+++.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~-p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAA-PGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCC-TTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcC-CCCEEEEEeCC
Confidence 378777766666664 56668888877 88888888743
No 222
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=28.58 E-value=1.5e+02 Score=28.41 Aligned_cols=32 Identities=3% Similarity=-0.031 Sum_probs=24.2
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
+||+++.. | .-.+.+++++++ .|++|+.+.+.
T Consensus 3 k~ilI~g~---g--~~~~~~~~a~~~-~G~~vv~v~~~ 34 (451)
T 1ulz_A 3 NKVLVANR---G--EIAVRIIRACKE-LGIPTVAIYNE 34 (451)
T ss_dssp SSEEECCC---H--HHHHHHHHHHHH-HTCCEEEEECG
T ss_pred ceEEEECC---c--HHHHHHHHHHHH-cCCeEEEEech
Confidence 47888753 2 235689999999 99999888753
No 223
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=28.44 E-value=2.7e+02 Score=26.67 Aligned_cols=34 Identities=12% Similarity=0.045 Sum_probs=23.8
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
.+++|+++..++ ...++|..|++..|++++++.+
T Consensus 20 ~~~~iliiG~g~-----r~~a~a~~~~~~~g~~~v~~~~ 53 (451)
T 2yrx_A 20 SHMNVLVIGRGG-----REHAIAWKAAQSPLVGKLYVAP 53 (451)
T ss_dssp SSEEEEEEECSH-----HHHHHHHHHHTCTTEEEEEEEE
T ss_pred CCCEEEEECCCH-----HHHHHHHHHHhcCCCCEEEEEC
Confidence 346899988773 3567787775526898877764
No 224
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=28.37 E-value=38 Score=26.14 Aligned_cols=32 Identities=19% Similarity=0.292 Sum_probs=23.5
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
.+||+++.. |.+- ..+|+.|.+ .||+|+++..
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~-~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSE-KGHDIVLIDI 35 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHH-TTCEEEEEES
T ss_pred CCEEEEECC---CHHH--HHHHHHHHh-CCCeEEEEEC
Confidence 358888854 4442 357899999 9999998874
No 225
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=28.32 E-value=72 Score=28.66 Aligned_cols=38 Identities=11% Similarity=-0.005 Sum_probs=27.2
Q ss_pred CceEEEEcCCCc-cCHH---HHHHHHHHHHhCCCcEEEEEcCC
Q 043168 5 KENIVMFPLMAQ-GHII---PFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 5 ~~~Il~~~~~~~-GHv~---P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
++||+++..+.. -|-. ....++++|.+ +||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~-~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLRE-GGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHH-TTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHH-CCCeEEEEecC
Confidence 458988876532 2222 34579999999 99999988754
No 226
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=28.28 E-value=2.4e+02 Score=26.16 Aligned_cols=110 Identities=16% Similarity=0.176 Sum_probs=61.9
Q ss_pred ceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChHHh
Q 043168 263 SVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEI 342 (473)
Q Consensus 263 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~l 342 (473)
.+..|+.|.+.. ..++.++...+.+++.+..... + ....+.+++ + . ..-|-...++
T Consensus 28 rvgiiG~G~~~~------~~~~~~~~~~~~~lvav~d~~~------~------~a~~~a~~~---~-~--~~~~~~~~~l 83 (361)
T 3u3x_A 28 RFAAVGLNHNHI------YGQVNCLLRAGARLAGFHEKDD------A------LAAEFSAVY---A-D--ARRIATAEEI 83 (361)
T ss_dssp EEEEECCCSTTH------HHHHHHHHHTTCEEEEEECSCH------H------HHHHHHHHS---S-S--CCEESCHHHH
T ss_pred EEEEECcCHHHH------HHHHHHhhcCCcEEEEEEcCCH------H------HHHHHHHHc---C-C--CcccCCHHHH
Confidence 378888886541 2344445556777776664321 0 112232222 1 1 1234567889
Q ss_pred hcccccceeeeccChh----hHHHHHhcCCCEEe-cccccc--hhh-hHHHHHHHHcceEEEe
Q 043168 343 LSHKSISAFLSHCGWN----SVLEALSHGVPIIG-WPLAAE--QFY-NSKLLEEVIGVCVEVA 397 (473)
Q Consensus 343 L~~~~~~~~I~HgG~g----s~~eal~~GvP~i~-~P~~~D--Q~~-~a~~v~~~lG~G~~l~ 397 (473)
|..+++++++--.-.. -+.+||.+|+++++ -|+..+ +-. ..+..++. |+-+.+.
T Consensus 84 l~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~-g~~l~v~ 145 (361)
T 3u3x_A 84 LEDENIGLIVSAAVSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAET-GRIFSIL 145 (361)
T ss_dssp HTCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTT-CCCEEEE
T ss_pred hcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHc-CCEEEEe
Confidence 9888888887544433 36789999999998 787543 322 22333333 5555544
No 227
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=28.25 E-value=51 Score=30.62 Aligned_cols=36 Identities=22% Similarity=0.381 Sum_probs=28.5
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
|+.++.+|+++..+..| +.+|..|++ +|++|+++--
T Consensus 2 ~m~~~~dVvVIG~Gi~G-----ls~A~~La~-~G~~V~vle~ 37 (363)
T 1c0p_A 2 MMHSQKRVVVLGSGVIG-----LSSALILAR-KGYSVHILAR 37 (363)
T ss_dssp CCCCSCEEEEECCSHHH-----HHHHHHHHH-TTCEEEEEES
T ss_pred CCCCCCCEEEECCCHHH-----HHHHHHHHh-CCCEEEEEec
Confidence 44456689999888655 678889999 9999999963
No 228
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=28.24 E-value=70 Score=28.12 Aligned_cols=38 Identities=13% Similarity=0.106 Sum_probs=26.6
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
|...+-++++++.++.| =-..+|+.|.+ +|++|+++.-
T Consensus 24 m~~l~~k~vlITGas~g---IG~~la~~l~~-~G~~V~~~~r 61 (262)
T 3rkr_A 24 MSSLSGQVAVVTGASRG---IGAAIARKLGS-LGARVVLTAR 61 (262)
T ss_dssp -CTTTTCEEEESSTTSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred hhccCCCEEEEECCCCh---HHHHHHHHHHH-CCCEEEEEEC
Confidence 44334477788866543 34678999999 9999888763
No 229
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=28.15 E-value=42 Score=30.20 Aligned_cols=31 Identities=23% Similarity=0.238 Sum_probs=22.0
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 7 NIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 7 ~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
|||+.. +.|-+= -.|++.|.+ +||+|+.++-
T Consensus 2 kILVTG--atGfIG--~~L~~~L~~-~G~~V~~l~R 32 (298)
T 4b4o_A 2 RVLVGG--GTGFIG--TALTQLLNA-RGHEVTLVSR 32 (298)
T ss_dssp EEEEET--TTSHHH--HHHHHHHHH-TTCEEEEEES
T ss_pred EEEEEC--CCCHHH--HHHHHHHHH-CCCEEEEEEC
Confidence 666553 334332 367899999 9999999873
No 230
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=28.14 E-value=36 Score=31.86 Aligned_cols=37 Identities=22% Similarity=0.260 Sum_probs=29.0
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
|+....+|+++..+..| +.+|..|.+ +|++|+++--.
T Consensus 1 Mm~~~~dVvIIGgGi~G-----l~~A~~La~-~G~~V~lle~~ 37 (382)
T 1y56_B 1 MLPEKSEIVVIGGGIVG-----VTIAHELAK-RGEEVTVIEKR 37 (382)
T ss_dssp -CCSBCSEEEECCSHHH-----HHHHHHHHH-TTCCEEEECSS
T ss_pred CCCCcCCEEEECCCHHH-----HHHHHHHHH-CCCeEEEEeCC
Confidence 55455689999887666 778999999 99999998744
No 231
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=27.76 E-value=1.1e+02 Score=25.48 Aligned_cols=40 Identities=8% Similarity=0.024 Sum_probs=30.5
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 3 QRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 3 ~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
.+++||+|+..++..- .-+....+.|.+ .|++|.+++...
T Consensus 21 ~~~~kV~ill~~g~~~-~e~~~~~~~l~~-ag~~v~~vs~~~ 60 (193)
T 1oi4_A 21 GLSKKIAVLITDEFED-SEFTSPADEFRK-AGHEVITIEKQA 60 (193)
T ss_dssp TCCCEEEEECCTTBCT-HHHHHHHHHHHH-TTCEEEEEESST
T ss_pred ccCCEEEEEECCCCCH-HHHHHHHHHHHH-CCCEEEEEECCC
Confidence 3566899988876553 455667889999 999999999653
No 232
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=27.76 E-value=1.2e+02 Score=29.15 Aligned_cols=32 Identities=3% Similarity=-0.004 Sum_probs=24.1
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
+||+++.. | ...+.+++++++ .|++|+++.+.
T Consensus 2 k~ilI~g~---g--~~~~~i~~a~~~-~G~~vv~v~~~ 33 (451)
T 2vpq_A 2 KKVLIANR---G--EIAVRIIRACRD-LGIQTVAIYSE 33 (451)
T ss_dssp CEEEECCC---H--HHHHHHHHHHHH-TTCEEEEEEEG
T ss_pred ceEEEeCC---C--HHHHHHHHHHHH-cCCEEEEEecc
Confidence 37887753 2 246689999999 99999988743
No 233
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=27.56 E-value=2.1e+02 Score=24.89 Aligned_cols=31 Identities=16% Similarity=0.084 Sum_probs=22.1
Q ss_pred CCeEEE-eCCCcc-hHHHHHHHhCCcEEEEccc
Q 043168 117 KPVCII-ADMFFA-WSAEIAQEYGIFNALFVGG 147 (473)
Q Consensus 117 ~pDlVI-~D~~~~-~~~~~A~~~giP~v~~~~~ 147 (473)
.||+|| .|...- .+..=|..+|||.|.+.-+
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDT 189 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDT 189 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecC
Confidence 589766 565333 4667788999999998543
No 234
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=27.43 E-value=3.3e+02 Score=24.25 Aligned_cols=38 Identities=11% Similarity=-0.047 Sum_probs=25.9
Q ss_pred ccCHHHHHHHHHHHH---cCChhhHHHHHHHHHHHHHHHHhh
Q 043168 403 EVSKENLSAKFELVM---NETEKGMDLRKKASEVEMIIKNAV 441 (473)
Q Consensus 403 ~~~~~~l~~ai~~~l---~~~~~~~~~~~~a~~~~~~~~~a~ 441 (473)
..-+..|++.|...| .++ ....+-+.+.+++..+++..
T Consensus 171 p~lA~~ir~~ie~~l~~~p~~-~~~~~~~~l~~~R~~ik~~~ 211 (274)
T 1kyq_A 171 PRFGALVRDEIRNLFTQMGDL-ALEDAVVKLGELRRGIRLLA 211 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHS
T ss_pred cHHHHHHHHHHHHHHhcCCch-hHHHHHHHHHHHHHHHHhhC
Confidence 344578888888888 634 23356777778888887653
No 235
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=27.42 E-value=35 Score=30.99 Aligned_cols=32 Identities=13% Similarity=0.088 Sum_probs=27.2
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
++||.|+..+..|. .+|..|.+ .||+|+++..
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~-~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTE-WPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTT-STTCEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHH-CCCeEEEEeC
Confidence 46899999888885 68999999 9999998863
No 236
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=26.92 E-value=2.5e+02 Score=25.19 Aligned_cols=79 Identities=14% Similarity=0.050 Sum_probs=50.4
Q ss_pred CcEEEEEcCCcchhhhhhcCCCCCCceEEeccCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhhhhHHHHHHHhhhhhcc
Q 043168 34 RYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQ 113 (473)
Q Consensus 34 Gh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~ip~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 113 (473)
..+..+++++.+..+....|. +...+. +...+.+ + .......+.+.+++.
T Consensus 178 ~~~~~v~~H~af~Yf~~~yGl-----~~~~~~------~~~~~~e-----p----------s~~~l~~l~~~ik~~---- 227 (286)
T 3gi1_A 178 RSKTFVTQHTAFSYLAKRFGL-----KQLGIS------GISPEQE-----P----------SPRQLKEIQDFVKEY---- 227 (286)
T ss_dssp SCCEEEEEESCCHHHHHHTTC-----EEEEEE------CSCC--------C----------CHHHHHHHHHHHHHT----
T ss_pred CCCEEEEECCchHHHHHHCCC-----eEeecc------ccCCCCC-----C----------CHHHHHHHHHHHHHc----
Confidence 344556667778888888544 666543 2222111 1 013334556778888
Q ss_pred CCCCCeEEEeCCCcc--hHHHHHHHhCCcEEEEc
Q 043168 114 NGHKPVCIIADMFFA--WSAEIAQEYGIFNALFV 145 (473)
Q Consensus 114 ~~~~pDlVI~D~~~~--~~~~~A~~~giP~v~~~ 145 (473)
+..+|+++.... .+-.+|+..|++.+.+.
T Consensus 228 ---~v~~if~e~~~~~~~~~~la~~~g~~v~~l~ 258 (286)
T 3gi1_A 228 ---NVKTIFAEDNVNPKIAHAIAKSTGAKVKTLS 258 (286)
T ss_dssp ---TCCEEEECTTSCTHHHHHHHHTTTCEEEECC
T ss_pred ---CCCEEEEeCCCChHHHHHHHHHhCCeEEEec
Confidence 899999998776 34568999999988763
No 237
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=26.91 E-value=2.2e+02 Score=26.26 Aligned_cols=109 Identities=17% Similarity=0.068 Sum_probs=58.0
Q ss_pred eEEEEecCcccCCHHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChHHh
Q 043168 264 VIYVSFGSQNTIAASQMMQLAMALEAC-GKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEI 342 (473)
Q Consensus 264 ~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~l 342 (473)
+.+|+.|.++. ..++.++... +..++.+..... . ....+.++. ++. .+-...++
T Consensus 30 igiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~~-------~-----~~~~~a~~~-----g~~--~~~~~~~l 84 (350)
T 3rc1_A 30 VGVIGCADIAW------RRALPALEAEPLTEVTAIASRRW-------D-----RAKRFTERF-----GGE--PVEGYPAL 84 (350)
T ss_dssp EEEESCCHHHH------HTHHHHHHHCTTEEEEEEEESSH-------H-----HHHHHHHHH-----CSE--EEESHHHH
T ss_pred EEEEcCcHHHH------HHHHHHHHhCCCeEEEEEEcCCH-------H-----HHHHHHHHc-----CCC--CcCCHHHH
Confidence 77888887762 1355566554 556554543220 0 111222222 222 23456788
Q ss_pred hcccccceeeeccC----hhhHHHHHhcCCCEEe-ccccc--chhhh-HHHHHHHHcceEEEec
Q 043168 343 LSHKSISAFLSHCG----WNSVLEALSHGVPIIG-WPLAA--EQFYN-SKLLEEVIGVCVEVAR 398 (473)
Q Consensus 343 L~~~~~~~~I~HgG----~gs~~eal~~GvP~i~-~P~~~--DQ~~~-a~~v~~~lG~G~~l~~ 398 (473)
|..+++++++---- .-.+.+|+.+|+++++ -|+.. ++-.- .+.+++. |+-+.+..
T Consensus 85 l~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~-g~~~~v~~ 147 (350)
T 3rc1_A 85 LERDDVDAVYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARER-GLLLMENF 147 (350)
T ss_dssp HTCTTCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHT-TCCEEEEC
T ss_pred hcCCCCCEEEECCCcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHh-CCEEEEEe
Confidence 87766667664322 2346688999999887 47654 33332 2333444 66555543
No 238
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=26.90 E-value=2e+02 Score=28.70 Aligned_cols=27 Identities=19% Similarity=0.193 Sum_probs=22.1
Q ss_pred cceeeeccChh------hHHHHHhcCCCEEecc
Q 043168 348 ISAFLSHCGWN------SVLEALSHGVPIIGWP 374 (473)
Q Consensus 348 ~~~~I~HgG~g------s~~eal~~GvP~i~~P 374 (473)
..++++|.|-| .++||-+.++|+|++-
T Consensus 71 pgv~~~TsGpG~~N~~~gi~~A~~~~vPll~it 103 (564)
T 2q28_A 71 PGICLTVSAPGFLNGLTALANATVNGFPMIMIS 103 (564)
T ss_dssp CEEEEECSHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEEccCchHHHHHHHHHHHHhcCCCEEEEe
Confidence 34788999864 6679999999999974
No 239
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=26.83 E-value=1.1e+02 Score=29.05 Aligned_cols=93 Identities=9% Similarity=0.041 Sum_probs=0.0
Q ss_pred hhhhhhhccCCCCceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCC
Q 043168 250 ESCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQ 329 (473)
Q Consensus 250 ~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (473)
..+.+++...+ +.++.|+-.+.... ....+.+.|++ +..+++..-.+ +...+.+.+-..
T Consensus 42 ~~l~~~l~~~g-~r~liVtd~~~~~~---~~~~v~~~L~~-g~~~~~~~~~~------------~p~~~~v~~~~~---- 100 (387)
T 3uhj_A 42 DKLAAYLAPLG-KRALVLIDRVLFDA---LSERIGKSCGD-SLDIRFERFGG------------ECCTSEIERVRK---- 100 (387)
T ss_dssp TTTHHHHGGGC-SEEEEEECTTTHHH---HHHHC-------CCEEEEEECCS------------SCSHHHHHHHHH----
T ss_pred HHHHHHHHHcC-CEEEEEECchHHHH---HHHHHHHHHHc-CCCeEEEEcCC------------CCCHHHHHHHHH----
Q ss_pred CeEEecccChHHhhcccccceeeeccChhhHHHH-----HhcCCCEEecccc
Q 043168 330 GLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEA-----LSHGVPIIGWPLA 376 (473)
Q Consensus 330 ~v~~~~~~p~~~lL~~~~~~~~I~HgG~gs~~ea-----l~~GvP~i~~P~~ 376 (473)
.+....++++|-=|| ||+..+ +..|+|+|.+|..
T Consensus 101 ------------~~~~~~~d~IIavGG-Gs~~D~AK~iA~~~~~p~i~IPTT 139 (387)
T 3uhj_A 101 ------------VAIEHGSDILVGVGG-GKTADTAKIVAIDTGARIVIAPTI 139 (387)
T ss_dssp ------------HHHHHTCSEEEEESS-HHHHHHHHHHHHHTTCEEEECCSS
T ss_pred ------------HHhhcCCCEEEEeCC-cHHHHHHHHHHHhcCCCEEEecCc
No 240
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=26.79 E-value=2.2e+02 Score=28.65 Aligned_cols=27 Identities=19% Similarity=0.327 Sum_probs=22.3
Q ss_pred cceeeeccChh------hHHHHHhcCCCEEecc
Q 043168 348 ISAFLSHCGWN------SVLEALSHGVPIIGWP 374 (473)
Q Consensus 348 ~~~~I~HgG~g------s~~eal~~GvP~i~~P 374 (473)
..++++|.|-| .+++|-+.++|+|++-
T Consensus 76 p~v~~~TsGpG~~N~~~gv~~A~~~~vPll~it 108 (590)
T 1ybh_A 76 PGICIATSGPGATNLVSGLADALLDSVPLVAIT 108 (590)
T ss_dssp CEEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEeccCchHHHHHHHHHHHHhhCCCEEEEe
Confidence 44788999965 6789999999999974
No 241
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=26.49 E-value=62 Score=31.97 Aligned_cols=35 Identities=23% Similarity=0.220 Sum_probs=28.3
Q ss_pred HHHHHHHhhhhhccCCCCCeEEEeCCCcchHHHHHHHhCCcEEEE
Q 043168 100 PHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALF 144 (473)
Q Consensus 100 ~~l~~~l~~~~~~~~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~ 144 (473)
..+.++++.. +||++|... ....+|+++|||++.+
T Consensus 407 ~el~~~i~~~-------~pDL~ig~~---~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 407 YEFEEFVKRI-------KPDLIGSGI---KEKFIFQKMGIPFREM 441 (492)
T ss_dssp HHHHHHHHHH-------CCSEEEECH---HHHHHHHHTTCCEEES
T ss_pred HHHHHHHHhc-------CCcEEEeCc---chhHHHHHcCCCEEec
Confidence 3466788888 999999964 3567899999999975
No 242
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=26.41 E-value=2.3e+02 Score=29.09 Aligned_cols=82 Identities=9% Similarity=0.020 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccC-hHHhhc-------ccccc
Q 043168 278 SQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAP-QVEILS-------HKSIS 349 (473)
Q Consensus 278 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~lL~-------~~~~~ 349 (473)
..-+.+++.|.+.|++.++.+.+.. ...+.+.+.+ .+++....-.. +.+.+. .-..+
T Consensus 83 ~~a~~lv~~L~~~GV~~vFg~PG~~--------------~~pl~dal~~-~~~i~~v~~~hE~~Aa~aAdGyAr~tGkpg 147 (677)
T 1t9b_A 83 TGGQIFNEMMSRQNVDTVFGYPGGA--------------ILPVYDAIHN-SDKFNFVLPKHEQGAGHMAEGYARASGKPG 147 (677)
T ss_dssp BHHHHHHHHHHHTTCCEEEECCCGG--------------GHHHHHHTTT-CSSSEEECCSSHHHHHHHHHHHHHHHSSCE
T ss_pred CHHHHHHHHHHHcCCCEEEEecCcc--------------HHHHHHHHHh-CCCCeEEEeCChHHHHHHHHHHHHHHCCCE
Confidence 3456788999999999988776541 1223333321 12233222111 111110 12345
Q ss_pred eeeeccChh------hHHHHHhcCCCEEecc
Q 043168 350 AFLSHCGWN------SVLEALSHGVPIIGWP 374 (473)
Q Consensus 350 ~~I~HgG~g------s~~eal~~GvP~i~~P 374 (473)
++++|.|-| .+++|.+.++|+|++-
T Consensus 148 vv~~TsGpG~~N~~~gia~A~~d~vPllvIt 178 (677)
T 1t9b_A 148 VVLVTSGPGATNVVTPMADAFADGIPMVVFT 178 (677)
T ss_dssp EEEECSTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred EEEECCChHHHHHHHHHHHHHHcCCCEEEEe
Confidence 788899964 7889999999999974
No 243
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=26.37 E-value=49 Score=30.59 Aligned_cols=41 Identities=10% Similarity=0.085 Sum_probs=31.1
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC-cchhhhhh
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP-SNLKKLKS 51 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~-~~~~~v~~ 51 (473)
++||.|+..|..|- .+|..|.+ .||+|+++... ...+.+..
T Consensus 14 ~~kI~iIG~G~mG~-----ala~~L~~-~G~~V~~~~r~~~~~~~l~~ 55 (335)
T 1z82_A 14 EMRFFVLGAGSWGT-----VFAQMLHE-NGEEVILWARRKEIVDLINV 55 (335)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHH-TTCEEEEECSSHHHHHHHHH
T ss_pred CCcEEEECcCHHHH-----HHHHHHHh-CCCeEEEEeCCHHHHHHHHH
Confidence 56999999888884 78899999 99999998743 33344444
No 244
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=26.34 E-value=54 Score=32.00 Aligned_cols=34 Identities=21% Similarity=0.187 Sum_probs=27.5
Q ss_pred HHHHHHhhhhhccCCCCCeEEEeCCCcchHHHHHHHhCCcEEEE
Q 043168 101 HFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALF 144 (473)
Q Consensus 101 ~l~~~l~~~~~~~~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~ 144 (473)
.+.+++++. +||++|.+.. ...+|+++|||++.+
T Consensus 376 ~l~~~i~~~-------~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 376 DVHQWIKNE-------GVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHHS-------CCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred HHHHHHHhc-------CCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 356777777 9999998863 467799999999986
No 245
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=26.22 E-value=2.1e+02 Score=21.48 Aligned_cols=50 Identities=8% Similarity=-0.007 Sum_probs=30.9
Q ss_pred cCCCEEecccccchhhhHHHHHHHHcceEEEecccCCccCHHHHHHHHHHHHcCC
Q 043168 366 HGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCEVSKENLSAKFELVMNET 420 (473)
Q Consensus 366 ~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~~~~~~l~~ai~~~l~~~ 420 (473)
..+|+|++--..+.........+. |+---+. +.++.+++.++|++++...
T Consensus 79 ~~~~ii~~s~~~~~~~~~~~~~~~-g~~~~l~----kP~~~~~l~~~i~~~l~~~ 128 (140)
T 3grc_A 79 RDLAIVVVSANAREGELEFNSQPL-AVSTWLE----KPIDENLLILSLHRAIDNM 128 (140)
T ss_dssp TTCEEEEECTTHHHHHHHHCCTTT-CCCEEEC----SSCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCChHHHHHHhhhc-CCCEEEe----CCCCHHHHHHHHHHHHHhc
Confidence 478888875544433322122223 5444444 4689999999999998654
No 246
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=26.21 E-value=89 Score=27.78 Aligned_cols=41 Identities=10% Similarity=0.114 Sum_probs=27.3
Q ss_pred CCCCCceEEEEcCCCc-cCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 1 MAQRKENIVMFPLMAQ-GHIIPFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~-GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
|...+-|+++++.++. +-+ -.++|+.|.+ +|++|+++.-..
T Consensus 21 M~~l~~k~vlVTGasg~~GI--G~~ia~~l~~-~G~~V~~~~r~~ 62 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSI--AYGIAKAMHR-EGAELAFTYVGQ 62 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCH--HHHHHHHHHH-TTCEEEEEECTT
T ss_pred ccccCCCEEEEECCCCCCCH--HHHHHHHHHH-cCCEEEEeeCch
Confidence 4444457788887441 111 2578999999 999998887544
No 247
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=26.15 E-value=72 Score=28.52 Aligned_cols=34 Identities=18% Similarity=0.083 Sum_probs=25.6
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
+.|+++++.++.| =-.++|+.|.+ +|++|+++.-
T Consensus 24 ~~k~~lVTGas~G---IG~~ia~~la~-~G~~V~~~~r 57 (281)
T 3v2h_A 24 MTKTAVITGSTSG---IGLAIARTLAK-AGANIVLNGF 57 (281)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHHH-TTCEEEEECC
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHH-CCCEEEEEeC
Confidence 4467777766554 24588999999 9999988864
No 248
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=26.08 E-value=63 Score=29.29 Aligned_cols=37 Identities=5% Similarity=-0.037 Sum_probs=31.4
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
+.|+|..-|+-|=.+=...||..|++ +|++|.++-..
T Consensus 42 ~vI~v~~KGGvGKTT~a~nLA~~La~-~G~~VlliD~D 78 (307)
T 3end_A 42 KVFAVYGKGGIGKSTTSSNLSAAFSI-LGKRVLQIGCD 78 (307)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHH-TTCCEEEEEES
T ss_pred eEEEEECCCCccHHHHHHHHHHHHHH-CCCeEEEEeCC
Confidence 35666666799999999999999999 99999998744
No 249
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=26.07 E-value=1.6e+02 Score=27.02 Aligned_cols=17 Identities=18% Similarity=0.077 Sum_probs=14.2
Q ss_pred CccCHHHHHHHHHHHHc
Q 043168 402 CEVSKENLSAKFELVMN 418 (473)
Q Consensus 402 ~~~~~~~l~~ai~~~l~ 418 (473)
..++++.|.++++++|.
T Consensus 307 ~gl~~~~I~~~i~~~l~ 323 (324)
T 1w85_B 307 WLPNFKDVIETAKKVMN 323 (324)
T ss_dssp HSCCHHHHHHHHHHHHT
T ss_pred hCcCHHHHHHHHHHHhh
Confidence 46899999999998874
No 250
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=25.87 E-value=84 Score=25.57 Aligned_cols=49 Identities=8% Similarity=0.010 Sum_probs=34.3
Q ss_pred HHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcc-----h----------HHHHHHHhCCcEEEEccc
Q 043168 92 FESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA-----W----------SAEIAQEYGIFNALFVGG 147 (473)
Q Consensus 92 ~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~-----~----------~~~~A~~~giP~v~~~~~ 147 (473)
-..+......+.+++++. +||.+..+..++ . ...++...|+|+..+.+.
T Consensus 41 ~~Rl~~i~~~l~~~i~~~-------~Pd~vaiE~vf~~~n~~s~~~lgqarGv~~~a~~~~~ipv~eytp~ 104 (158)
T 1hjr_A 41 PSRLKLIYAGVTEIITQF-------QPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAAR 104 (158)
T ss_dssp HHHHHHHHHHHHHHHHHH-------CCSEEEEEECCCCCCTTTHHHHHHHHHHHHHHHHTTTCCEEEEEHH
T ss_pred HHHHHHHHHHHHHHHHHc-------CCCEEEEeecccccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHH
Confidence 344566677789999999 999888665443 1 134667789998888543
No 251
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=25.83 E-value=38 Score=31.22 Aligned_cols=33 Identities=9% Similarity=0.039 Sum_probs=27.6
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCC-cEEEEEcCC
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNR-YTITFVNTP 43 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rG-h~Vt~~~~~ 43 (473)
+++|.|+..|..| ..+|..|.+ .| |+|+++...
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~-~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGG-RNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHT-TTCSEEEEECGG
T ss_pred CCeEEEECccHHH-----HHHHHHHHH-cCCCeEEEEeCC
Confidence 4589999988777 578999999 99 999987643
No 252
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=25.79 E-value=35 Score=30.50 Aligned_cols=33 Identities=21% Similarity=0.213 Sum_probs=24.2
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
+++|++.. + |-+ -..|++.|.+ +||+|+.++-.
T Consensus 3 ~~~ilVtG--a-G~i--G~~l~~~L~~-~g~~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIAG--C-GDL--GLELARRLTA-QGHEVTGLRRS 35 (286)
T ss_dssp CCCEEEEC--C-SHH--HHHHHHHHHH-TTCCEEEEECT
T ss_pred CCcEEEEC--C-CHH--HHHHHHHHHH-CCCEEEEEeCC
Confidence 34777773 4 633 4478999999 99999998743
No 253
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=25.76 E-value=3.5e+02 Score=24.91 Aligned_cols=61 Identities=18% Similarity=0.098 Sum_probs=38.5
Q ss_pred ccChHHhhcccccceeeeccChhh----HHHHHhcCCCEEe-cccccc--hhh-hHHHHHHHHcceEEEe
Q 043168 336 WAPQVEILSHKSISAFLSHCGWNS----VLEALSHGVPIIG-WPLAAE--QFY-NSKLLEEVIGVCVEVA 397 (473)
Q Consensus 336 ~~p~~~lL~~~~~~~~I~HgG~gs----~~eal~~GvP~i~-~P~~~D--Q~~-~a~~v~~~lG~G~~l~ 397 (473)
|-...++|..+++++++-..-..+ +.+|+.+|+++++ -|+..+ +-. ..+.+++. |+-+.+.
T Consensus 57 ~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~-g~~~~v~ 125 (359)
T 3m2t_A 57 LDNVPAMLNQVPLDAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRS-DVVSGVG 125 (359)
T ss_dssp ESSHHHHHHHSCCSEEEECSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHH-TCCEEEC
T ss_pred cCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHc-CCEEEEE
Confidence 346688888887778876555443 6688999999887 576542 333 23334444 6655554
No 254
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=25.71 E-value=1.2e+02 Score=27.96 Aligned_cols=26 Identities=15% Similarity=0.102 Sum_probs=20.8
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 276 AASQMMQLAMALEACGKNFIWVVKPP 301 (473)
Q Consensus 276 ~~~~~~~~~~al~~~~~~~i~~~~~~ 301 (473)
..+....+.+++.+..++.||.+..+
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGG 88 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCc
Confidence 34567778999999999999987765
No 255
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=25.60 E-value=39 Score=30.99 Aligned_cols=34 Identities=9% Similarity=0.063 Sum_probs=26.5
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCc-EEEEEcC
Q 043168 3 QRKENIVMFPLMAQGHIIPFLALALHLENTNRY-TITFVNT 42 (473)
Q Consensus 3 ~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh-~Vt~~~~ 42 (473)
+.+++|.|+..|..|. .+|..|.+ .|| +|+++..
T Consensus 22 ~~~~~I~iIG~G~mG~-----~~A~~L~~-~G~~~V~~~dr 56 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAAS-----AIASGLRQ-AGAIDMAAYDA 56 (312)
T ss_dssp ---CEEEEECCSHHHH-----HHHHHHHH-HSCCEEEEECS
T ss_pred CCCCEEEEECccHHHH-----HHHHHHHH-CCCCeEEEEcC
Confidence 3456999998887774 78999999 999 9998875
No 256
>1wrd_A TOM1, target of MYB protein 1; three-helix bundle, ubiquitin-binding protein, protein trans signaling protein complex; 1.75A {Homo sapiens} SCOP: a.7.8.1
Probab=25.39 E-value=2e+02 Score=21.34 Aligned_cols=30 Identities=3% Similarity=0.030 Sum_probs=19.9
Q ss_pred cCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHHHh
Q 043168 404 VSKENLSAKFELVMNETEKGMDLRKKASEVEMIIKNA 440 (473)
Q Consensus 404 ~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~~a 440 (473)
++++++++...++- ..+.+++-+.+.+..+
T Consensus 3 ~~~eq~~k~~~el~-------~v~~n~~lL~EML~~~ 32 (103)
T 1wrd_A 3 LGSEQIGKLRSELE-------MVSGNVRVMSEMLTEL 32 (103)
T ss_dssp SSSTTHHHHHHHHH-------HHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHH-------HHHHHHHHHHHHHHhc
Confidence 56677666666553 5777777777777654
No 257
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=25.35 E-value=70 Score=31.07 Aligned_cols=42 Identities=14% Similarity=0.195 Sum_probs=35.5
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchh
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLK 47 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~ 47 (473)
+..|+++..++.|-.+-+..||..|.. +|++|.++..+.+..
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~-~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQK-RGYKVGVVCSDTWRP 141 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHT-TTCCEEEEECCCSST
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHH-CCCeEEEEeCCCcch
Confidence 345677777899999999999999999 999999999776544
No 258
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=25.01 E-value=1.3e+02 Score=22.32 Aligned_cols=37 Identities=19% Similarity=0.293 Sum_probs=26.7
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
|.+++.+|+++- .+-.-...+...|.. .|++|..+.+
T Consensus 1 m~m~~~~ilivd----d~~~~~~~l~~~L~~-~g~~v~~~~~ 37 (132)
T 2rdm_A 1 MSLEAVTILLAD----DEAILLLDFESTLTD-AGFLVTAVSS 37 (132)
T ss_dssp -CCSSCEEEEEC----SSHHHHHHHHHHHHH-TTCEEEEESS
T ss_pred CCCCCceEEEEc----CcHHHHHHHHHHHHH-cCCEEEEECC
Confidence 777788998885 344445567888888 9999887654
No 259
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=24.95 E-value=1e+02 Score=23.39 Aligned_cols=31 Identities=13% Similarity=0.148 Sum_probs=21.0
Q ss_pred CCeEEEeCCCcc--hHHHHHHHh-------CCcEEEEccc
Q 043168 117 KPVCIIADMFFA--WSAEIAQEY-------GIFNALFVGG 147 (473)
Q Consensus 117 ~pDlVI~D~~~~--~~~~~A~~~-------giP~v~~~~~ 147 (473)
+||+||.|...+ .+..+++.+ .+|.+.++..
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 47 PPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 899999998765 344444432 5788877543
No 260
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=24.83 E-value=1.4e+02 Score=27.27 Aligned_cols=73 Identities=15% Similarity=0.224 Sum_probs=53.2
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChHHhhc-ccccceeeec
Q 043168 276 AASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILS-HKSISAFLSH 354 (473)
Q Consensus 276 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~-~~~~~~~I~H 354 (473)
+.+..+.+.+++.+..++.||.+..+. .-.++.++++...+-. ++. .||-+
T Consensus 65 d~~Ra~dL~~a~~Dp~i~aI~~~rGGy--------------------------ga~rlLp~LD~~~i~~a~PK--~~iGy 116 (311)
T 1zl0_A 65 VEQRLEDLHNAFDMPDITAVWCLRGGY--------------------------GCGQLLPGLDWGRLQAASPR--PLIGF 116 (311)
T ss_dssp HHHHHHHHHHHHHSTTEEEEEESCCSS--------------------------CGGGGTTTCCHHHHHHSCCC--CEEEC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEccCCc--------------------------CHHHHhhccchhhhhccCCC--EEEEE
Confidence 456677788999998899999887662 1112446777666655 666 69988
Q ss_pred cChhhHHHHHh-cCCCEEecccc
Q 043168 355 CGWNSVLEALS-HGVPIIGWPLA 376 (473)
Q Consensus 355 gG~gs~~eal~-~GvP~i~~P~~ 376 (473)
.-...++-+++ .|++.+.-|..
T Consensus 117 SDiTaL~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 117 SDISVLLSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp GGGHHHHHHHHHTTCCEEECCCG
T ss_pred chhHHHHHHHHHcCCcEEECHhh
Confidence 88888888886 48888887754
No 261
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=24.81 E-value=69 Score=26.58 Aligned_cols=42 Identities=10% Similarity=0.066 Sum_probs=27.7
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
|...+++|+++...+.=.. =++.-.+.|++ .|++|++++...
T Consensus 4 m~~t~~~v~il~~~gFe~~-E~~~p~~~l~~-ag~~V~~~s~~~ 45 (177)
T 4hcj_A 4 MGKTNNILYVMSGQNFQDE-EYFESKKIFES-AGYKTKVSSTFI 45 (177)
T ss_dssp -CCCCEEEEECCSEEECHH-HHHHHHHHHHH-TTCEEEEEESSS
T ss_pred cccCCCEEEEECCCCccHH-HHHHHHHHHHH-CCCEEEEEECCC
Confidence 6655555666655444333 35566788999 999999999653
No 262
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=24.72 E-value=85 Score=27.88 Aligned_cols=38 Identities=18% Similarity=0.243 Sum_probs=27.5
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
|...+-|+++++.++.| =-.++|+.|.+ +|++|+++.-
T Consensus 5 m~~l~gk~vlVTGas~g---IG~~ia~~l~~-~G~~V~~~~~ 42 (287)
T 3pxx_A 5 MGRVQDKVVLVTGGARG---QGRSHAVKLAE-EGADIILFDI 42 (287)
T ss_dssp CCTTTTCEEEEETTTSH---HHHHHHHHHHH-TTCEEEEEEC
T ss_pred ccccCCCEEEEeCCCCh---HHHHHHHHHHH-CCCeEEEEcc
Confidence 44344477888877654 24588999999 9999988763
No 263
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=24.68 E-value=64 Score=27.53 Aligned_cols=37 Identities=16% Similarity=0.123 Sum_probs=25.4
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEc
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVN 41 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~ 41 (473)
|+..+.|+++++.++.| =-.++|++|.+ +|++|+++.
T Consensus 1 M~~~~~k~vlVTGas~g---IG~~~a~~l~~-~G~~V~~~~ 37 (223)
T 3uce_A 1 MMGSDKTVYVVLGGTSG---IGAELAKQLES-EHTIVHVAS 37 (223)
T ss_dssp ----CCEEEEEETTTSH---HHHHHHHHHCS-TTEEEEEES
T ss_pred CCCCCCCEEEEECCCCH---HHHHHHHHHHH-CCCEEEEec
Confidence 44445578888876654 24578999999 999998876
No 264
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=24.61 E-value=82 Score=27.98 Aligned_cols=38 Identities=18% Similarity=0.120 Sum_probs=27.1
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
|...+-|+++++.++.| =-.++|+.|.+ +|++|+++.-
T Consensus 5 m~~l~~k~~lVTGas~g---IG~a~a~~l~~-~G~~V~~~~r 42 (281)
T 3s55_A 5 MADFEGKTALITGGARG---MGRSHAVALAE-AGADIAICDR 42 (281)
T ss_dssp -CTTTTCEEEEETTTSH---HHHHHHHHHHH-TTCEEEEEEC
T ss_pred ccccCCCEEEEeCCCch---HHHHHHHHHHH-CCCeEEEEeC
Confidence 33334477888877654 24578999999 9999988764
No 265
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=24.59 E-value=1.3e+02 Score=22.66 Aligned_cols=32 Identities=19% Similarity=0.156 Sum_probs=21.4
Q ss_pred CCeEEEeCCCcc--hHHHHHHHh-----CCcEEEEcccc
Q 043168 117 KPVCIIADMFFA--WSAEIAQEY-----GIFNALFVGGG 148 (473)
Q Consensus 117 ~pDlVI~D~~~~--~~~~~A~~~-----giP~v~~~~~~ 148 (473)
+||+||.|...+ .+..+++.+ .+|.+.++...
T Consensus 49 ~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (133)
T 3b2n_A 49 NPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFK 87 (133)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCC
Confidence 899999998765 344444332 58888775543
No 266
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=24.57 E-value=68 Score=30.26 Aligned_cols=37 Identities=11% Similarity=0.099 Sum_probs=27.9
Q ss_pred CceEEEEcCCCcc-C---HHHHHHHHHHH-HhCCCcEEEEEcC
Q 043168 5 KENIVMFPLMAQG-H---IIPFLALALHL-ENTNRYTITFVNT 42 (473)
Q Consensus 5 ~~~Il~~~~~~~G-H---v~P~l~LA~~L-~~~rGh~Vt~~~~ 42 (473)
|+||+++..+-.+ | +.....++++| .+ .||+|+.+..
T Consensus 3 k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~-~g~~v~~i~~ 44 (377)
T 1ehi_A 3 KKRVALIFGGNSSEHDVSKRSAQNFYNAIEAT-GKYEIIVFAI 44 (377)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHH-SSEEEEEEEE
T ss_pred CcEEEEEeCCCCCCcceeHHHHHHHHHHhCcc-cCcEEEEEEE
Confidence 6689888765333 3 33567889999 99 9999998863
No 267
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=24.53 E-value=70 Score=28.67 Aligned_cols=37 Identities=8% Similarity=0.059 Sum_probs=30.1
Q ss_pred eEEEEc--CCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 7 NIVMFP--LMAQGHIIPFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 7 ~Il~~~--~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
|++.+. -|+-|-..=...||..|.+ +|++|.++-...
T Consensus 5 kvI~v~s~KGGvGKTT~a~nLA~~La~-~G~~VlliD~D~ 43 (286)
T 2xj4_A 5 RVIVVGNEKGGAGKSTIAVHLVTALLY-GGAKVAVIDLDL 43 (286)
T ss_dssp EEEEECCSSSCTTHHHHHHHHHHHHHH-TTCCEEEEECCT
T ss_pred eEEEEEcCCCCCCHHHHHHHHHHHHHH-CCCcEEEEECCC
Confidence 554444 3689999999999999999 999999887554
No 268
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=24.48 E-value=73 Score=28.61 Aligned_cols=34 Identities=12% Similarity=0.109 Sum_probs=25.6
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
+.|+++++.++.| =-.++|+.|.+ +|++|++++-
T Consensus 11 ~~k~vlITGas~G---IG~~~a~~L~~-~G~~V~~~~r 44 (311)
T 3o26_A 11 KRRCAVVTGGNKG---IGFEICKQLSS-NGIMVVLTCR 44 (311)
T ss_dssp -CCEEEESSCSSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCcEEEEecCCch---HHHHHHHHHHH-CCCEEEEEeC
Confidence 3478888877654 23578999999 9999988874
No 269
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=24.40 E-value=64 Score=29.53 Aligned_cols=34 Identities=21% Similarity=0.257 Sum_probs=22.6
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
.+++|++.. +.|-+ -..|++.|.+ +||+|+.+.-
T Consensus 4 ~~~~vlVTG--atG~i--G~~l~~~L~~-~G~~V~~~~r 37 (341)
T 3enk_A 4 TKGTILVTG--GAGYI--GSHTAVELLA-HGYDVVIADN 37 (341)
T ss_dssp SSCEEEEET--TTSHH--HHHHHHHHHH-TTCEEEEECC
T ss_pred CCcEEEEec--CCcHH--HHHHHHHHHH-CCCcEEEEec
Confidence 444665543 22322 2478999999 9999998863
No 270
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=24.38 E-value=79 Score=29.14 Aligned_cols=36 Identities=14% Similarity=0.132 Sum_probs=24.3
Q ss_pred HHHhhhhhccCCCCCeEEEeCCCcchHHHHHHHhCCcEEEEcc
Q 043168 104 KLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVG 146 (473)
Q Consensus 104 ~~l~~~~~~~~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~~~ 146 (473)
+.|..+ +||+||..........-.+..|+|++.+..
T Consensus 110 E~i~al-------~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 110 EACVAA-------TPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp HHHHHT-------CCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred HHHHhc-------CCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 455567 899999875432233344667999998854
No 271
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=24.37 E-value=1.6e+02 Score=27.04 Aligned_cols=28 Identities=11% Similarity=0.156 Sum_probs=23.5
Q ss_pred cceeeeccChhhHHHHHh------cCCCEEeccc
Q 043168 348 ISAFLSHCGWNSVLEALS------HGVPIIGWPL 375 (473)
Q Consensus 348 ~~~~I~HgG~gs~~eal~------~GvP~i~~P~ 375 (473)
.+++|.=||=||+.|++. .++|+.++|.
T Consensus 81 ~d~vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 81 YDVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp CSEEEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred CCEEEEEcCchHHHHHHHHHHhCCCCCcEEEecC
Confidence 458999999999999863 4689999997
No 272
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=24.20 E-value=66 Score=28.87 Aligned_cols=33 Identities=12% Similarity=0.197 Sum_probs=26.9
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
..+||.|+..|..|. .+|..|.+ .||+|+++..
T Consensus 3 ~~~kV~VIGaG~mG~-----~iA~~la~-~G~~V~l~d~ 35 (283)
T 4e12_A 3 GITNVTVLGTGVLGS-----QIAFQTAF-HGFAVTAYDI 35 (283)
T ss_dssp SCCEEEEECCSHHHH-----HHHHHHHH-TTCEEEEECS
T ss_pred CCCEEEEECCCHHHH-----HHHHHHHh-CCCeEEEEeC
Confidence 356999998777774 68999999 9999998764
No 273
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=24.08 E-value=66 Score=28.34 Aligned_cols=36 Identities=17% Similarity=0.115 Sum_probs=31.1
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 7 NIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 7 ~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
.|.|..-|+-|-.+=...||..|++ +|++|.++=..
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~-~G~~VlliD~D 38 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHA-MGKTIMVVGCD 38 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHT-TTCCEEEEEEC
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHH-CCCcEEEEcCC
Confidence 6777667899999999999999999 99999988643
No 274
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=24.05 E-value=61 Score=29.20 Aligned_cols=35 Identities=23% Similarity=0.275 Sum_probs=25.8
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
|. +++||.|+..|..|. .+|..|.+ .||+|+++..
T Consensus 1 M~-~~~~i~iiG~G~~G~-----~~a~~l~~-~g~~V~~~~~ 35 (301)
T 3cky_A 1 ME-KSIKIGFIGLGAMGK-----PMAINLLK-EGVTVYAFDL 35 (301)
T ss_dssp ----CCEEEEECCCTTHH-----HHHHHHHH-TTCEEEEECS
T ss_pred CC-CCCEEEEECccHHHH-----HHHHHHHH-CCCeEEEEeC
Confidence 55 456999998887775 46888999 9999987653
No 275
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=24.04 E-value=1.8e+02 Score=23.86 Aligned_cols=52 Identities=12% Similarity=0.043 Sum_probs=36.8
Q ss_pred HHHHHHhhhhHHHHHHHhhhhhccCCCCCeEEEeCCCcc-----h----------HHHHHHHhCCcEEEEcccc
Q 043168 90 NFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA-----W----------SAEIAQEYGIFNALFVGGG 148 (473)
Q Consensus 90 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~pDlVI~D~~~~-----~----------~~~~A~~~giP~v~~~~~~ 148 (473)
.+-..+....+.+.+++++. +||.+..+..++ . +..++...|+|+..+++..
T Consensus 43 ~~~~RL~~I~~~l~~~i~~~-------~Pd~vaiE~~F~~~n~~sal~lgqarGv~~la~~~~glpv~eytP~~ 109 (166)
T 4ep4_A 43 PAKERVGRIHARVLEVLHRF-------RPEAVAVEEQFFYRQNELAYKVGWALGAVLVAAFEAGVPVYAYGPMQ 109 (166)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-------CCSEEEEECCCCSSCSHHHHHHHHHHHHHHHHHHHHTCCEEEECHHH
T ss_pred CHHHHHHHHHHHHHHHHHHh-------CCCEEEEeehhhccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHHH
Confidence 34456667778889999999 999888765543 1 1246678899998885543
No 276
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=23.98 E-value=74 Score=28.02 Aligned_cols=38 Identities=13% Similarity=0.117 Sum_probs=30.4
Q ss_pred eEEEEc-CCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcc
Q 043168 7 NIVMFP-LMAQGHIIPFLALALHLENTNRYTITFVNTPSN 45 (473)
Q Consensus 7 ~Il~~~-~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~ 45 (473)
.|+|.. -|+-|=.+=...||..|.+ +|++|.++-....
T Consensus 20 vI~v~s~kGGvGKTT~a~nLA~~la~-~G~~VlliD~D~~ 58 (262)
T 2ph1_A 20 RIAVMSGKGGVGKSTVTALLAVHYAR-QGKKVGILDADFL 58 (262)
T ss_dssp EEEEECSSSCTTHHHHHHHHHHHHHH-TTCCEEEEECCSS
T ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHH-CCCeEEEEeCCCC
Confidence 454444 3689999999999999999 9999999875543
No 277
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=23.97 E-value=79 Score=28.39 Aligned_cols=33 Identities=12% Similarity=0.076 Sum_probs=25.6
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEc
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVN 41 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~ 41 (473)
+.|+++++.++.| =-.++|+.|.+ +|++|+++.
T Consensus 8 ~~k~~lVTGas~G---IG~aia~~la~-~G~~V~~~~ 40 (291)
T 1e7w_A 8 TVPVALVTGAAKR---LGRSIAEGLHA-EGYAVCLHY 40 (291)
T ss_dssp CCCEEEETTCSSH---HHHHHHHHHHH-TTCEEEEEE
T ss_pred CCCEEEEECCCch---HHHHHHHHHHH-CCCeEEEEc
Confidence 4477888876654 24588999999 999998886
No 278
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=23.94 E-value=52 Score=25.84 Aligned_cols=45 Identities=11% Similarity=-0.022 Sum_probs=33.3
Q ss_pred EEecccccchhhhHHHHHHHH-cceEEEecccCCcc-CHHHHHHHHHHHH
Q 043168 370 IIGWPLAAEQFYNSKLLEEVI-GVCVEVARGMNCEV-SKENLSAKFELVM 417 (473)
Q Consensus 370 ~i~~P~~~DQ~~~a~~v~~~l-G~G~~l~~~~~~~~-~~~~l~~ai~~~l 417 (473)
+.++|...+|...|..|++.| ..|++.+. ... +.+.|..+|++.-
T Consensus 11 v~IlpVs~~~~~YA~~V~~~L~~~GiRvev---D~~r~~e~Lg~kIR~a~ 57 (130)
T 1v95_A 11 CSVIVVNKQTKDYAESVGRKVRDLGMVVDL---IFLNTEVSLSQALEDVS 57 (130)
T ss_dssp EEEEESSSGGGHHHHHHHHHHHTTTCCEEE---EECTTSSCHHHHHHHHH
T ss_pred EEEEEeCcchHHHHHHHHHHHHHCCCEEEE---ecCCCCCcHHHHHHHHH
Confidence 478999999999999999888 55666654 222 2688888887653
No 279
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=23.72 E-value=2e+02 Score=28.73 Aligned_cols=27 Identities=19% Similarity=0.140 Sum_probs=22.3
Q ss_pred cceeeeccCh------hhHHHHHhcCCCEEecc
Q 043168 348 ISAFLSHCGW------NSVLEALSHGVPIIGWP 374 (473)
Q Consensus 348 ~~~~I~HgG~------gs~~eal~~GvP~i~~P 374 (473)
..++++|.|- +.++||-+.++|+|++-
T Consensus 73 pgv~~~TsGpG~~N~~~~i~~A~~~~vPll~it 105 (568)
T 2c31_A 73 PGVCLTVSAPGFLNGVTSLAHATTNCFPMILLS 105 (568)
T ss_dssp CEEEEECSHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEEcCCccHHHHHHHHHHHHhcCCCEEEEc
Confidence 3478899996 46779999999999974
No 280
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=23.71 E-value=4.5e+02 Score=26.16 Aligned_cols=81 Identities=16% Similarity=0.021 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEeccc-ChHHhhc-------ccccce
Q 043168 279 QMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWA-PQVEILS-------HKSISA 350 (473)
Q Consensus 279 ~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~lL~-------~~~~~~ 350 (473)
..+.+++.|.+.|++.++.+.+.. . ..+.+.+.. .+++....-. .|.+.+. ....++
T Consensus 13 ~a~~lv~~L~~~GV~~vFg~PG~~-------~---~~l~dal~~-----~~~i~~i~~~hE~~Aa~aAdGyAr~tG~pgv 77 (578)
T 3lq1_A 13 YLAAFIEELVQAGVKEAIISPGSR-------S---TPLALMMAE-----HPILKIYVDVDERSAGFFALGLAKASKRPVV 77 (578)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCTT-------T---HHHHHHHHH-----CSSCEEEECSSHHHHHHHHHHHHHHHCCCEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCc-------c---HHHHHHHHh-----CCCceEEEecCcHHHHHHHHHHHHhhCCCEE
Confidence 345678888899999888776541 0 012222221 1223221111 1221110 113457
Q ss_pred eeeccChh------hHHHHHhcCCCEEecc
Q 043168 351 FLSHCGWN------SVLEALSHGVPIIGWP 374 (473)
Q Consensus 351 ~I~HgG~g------s~~eal~~GvP~i~~P 374 (473)
++++.|-| .+++|-+.++|+|++-
T Consensus 78 ~~~TsGpG~~N~~~gia~A~~d~vPll~it 107 (578)
T 3lq1_A 78 LLCTSGTAAANYFPAVAEANLSQIPLIVLT 107 (578)
T ss_dssp EEECSSHHHHTTHHHHHHHHHTTCCEEEEE
T ss_pred EEECCchhhhhhhHHHHHHHhcCCCeEEEe
Confidence 88999966 6789999999999974
No 281
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=23.67 E-value=81 Score=27.27 Aligned_cols=33 Identities=3% Similarity=-0.122 Sum_probs=23.8
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
.|.++++.++.| =-.++|+.|.+ +|++|+++.-
T Consensus 7 ~k~vlVTGas~g---IG~~ia~~l~~-~G~~V~~~~r 39 (241)
T 1dhr_A 7 ARRVLVYGGRGA---LGSRCVQAFRA-RNWWVASIDV 39 (241)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHT-TTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHh-CCCEEEEEeC
Confidence 356667755543 24578999999 9999988763
No 282
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=23.66 E-value=2.4e+02 Score=24.21 Aligned_cols=86 Identities=10% Similarity=0.093 Sum_probs=0.0
Q ss_pred ceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEE---EcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccCh
Q 043168 263 SVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWV---VKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQ 339 (473)
Q Consensus 263 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 339 (473)
....|+.|..+ .+....++..+.+..++-+ +.... .+..+ -......++.+.
T Consensus 69 g~~lVsGGg~G-----iM~aa~~gAl~~gG~~iGV~~~~P~~~-------------~~~~~-------~t~~~~~~~f~~ 123 (217)
T 1wek_A 69 GFGVVTGGGPG-----VMEAVNRGAYEAGGVSVGLNIELPHEQ-------------KPNPY-------QTHALSLRYFFV 123 (217)
T ss_dssp TCEEEECSCSH-----HHHHHHHHHHHTTCCEEEEEECCTTCC-------------CCCSC-------CSEEEEESCHHH
T ss_pred CCEEEeCChhh-----HHHHHHHHHHHcCCCEEEEeeCCcchh-------------hcccc-------CCcCcccCCHHH
Q ss_pred -HHhhcccccceeeeccChhhHHHHHh----------cCCCEEec
Q 043168 340 -VEILSHKSISAFLSHCGWNSVLEALS----------HGVPIIGW 373 (473)
Q Consensus 340 -~~lL~~~~~~~~I~HgG~gs~~eal~----------~GvP~i~~ 373 (473)
..++...+-..++--||.||+-|... +++|++.+
T Consensus 124 Rk~~m~~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll 168 (217)
T 1wek_A 124 RKVLFVRYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLL 168 (217)
T ss_dssp HHHHHHHTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEE
T ss_pred HHHHHHHhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEe
No 283
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=23.66 E-value=3.1e+02 Score=22.69 Aligned_cols=143 Identities=17% Similarity=0.171 Sum_probs=78.7
Q ss_pred CceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChHH
Q 043168 262 NSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVE 341 (473)
Q Consensus 262 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 341 (473)
+|.|-|-+||.. +...++++.+.|++.++.+-+.+.+.+ ..|+.+.+-.. ..
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SAH------------Rtp~~l~~~~~-------------~a- 73 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAH------------RTPDYMFEYAE-------------TA- 73 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT------------TSHHHHHHHHH-------------HT-
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEccc------------cChHHHHHHHH-------------HH-
Confidence 567999999987 677888999999999988766665543 14444332111 00
Q ss_pred hhcccccceeeeccCh-h---hHHHHHhcCCCEEecccccch---hhhHHHHHHHHcceEEEec---ccCCccCHHHHHH
Q 043168 342 ILSHKSISAFLSHCGW-N---SVLEALSHGVPIIGWPLAAEQ---FYNSKLLEEVIGVCVEVAR---GMNCEVSKENLSA 411 (473)
Q Consensus 342 lL~~~~~~~~I~HgG~-g---s~~eal~~GvP~i~~P~~~DQ---~~~a~~v~~~lG~G~~l~~---~~~~~~~~~~l~~ 411 (473)
..-.++.+|.=.|. + ++..+ ..-+|+|.+|..... .+.--.+.+. =-|+-+.. ++..-.++.-++.
T Consensus 74 --~~~g~~ViIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQM-P~GvpVaTvaig~~ga~NAallA~ 149 (181)
T 4b4k_A 74 --RERGLKVIIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQM-PGGVPVATVAIGKAGSTNAGLLAA 149 (181)
T ss_dssp --TTTTCCEEEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHTC-CTTCCCEECCSSHHHHHHHHHHHH
T ss_pred --HhcCceEEEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHhC-CCCCceEEEecCCccHHHHHHHHH
Confidence 00113345554442 2 33333 567899999986432 3333333322 23332222 1001123344444
Q ss_pred HHHHHHcCChhhHHHHHHHHHHHHHHHHhh
Q 043168 412 KFELVMNETEKGMDLRKKASEVEMIIKNAV 441 (473)
Q Consensus 412 ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~ 441 (473)
.|- -+.|+ .++++.+.+++.+++.+
T Consensus 150 qIL-a~~d~----~l~~kl~~~r~~~~~~v 174 (181)
T 4b4k_A 150 QIL-GSFHD----DIHDALELRREAIEKDV 174 (181)
T ss_dssp HHH-TTTCH----HHHHHHHHHHHHHHHHH
T ss_pred HHH-ccCCH----HHHHHHHHHHHHHHHHH
Confidence 442 23566 78888888888776554
No 284
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=23.58 E-value=1.2e+02 Score=27.39 Aligned_cols=38 Identities=8% Similarity=0.072 Sum_probs=23.7
Q ss_pred CCCceEEEE-cCCCccCHHHHH--HHHHHHHhCCCcEEEEEc
Q 043168 3 QRKENIVMF-PLMAQGHIIPFL--ALALHLENTNRYTITFVN 41 (473)
Q Consensus 3 ~~~~~Il~~-~~~~~GHv~P~l--~LA~~L~~~rGh~Vt~~~ 41 (473)
|+++|||++ +.|-...++-.+ .+.+.|.+ .||+|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~-~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQ-AGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHH-TTCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHH-CCCeEEEEE
Confidence 345577554 456544455433 45688899 999999874
No 285
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=23.40 E-value=74 Score=29.51 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=23.6
Q ss_pred HHHhhhhhccCCCCCeEEEeCCCcc-hHHHHHHHhCCcEEEEc
Q 043168 104 KLINGLIDEQNGHKPVCIIADMFFA-WSAEIAQEYGIFNALFV 145 (473)
Q Consensus 104 ~~l~~~~~~~~~~~pDlVI~D~~~~-~~~~~A~~~giP~v~~~ 145 (473)
+.|.++ +||+||...... ....+.+.+|||++.+.
T Consensus 90 E~Ilal-------~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 90 ESLITL-------QPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp HHHHHH-------CCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred HHHhcC-------CCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 445567 899999865422 12235677899999874
No 286
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=23.34 E-value=1.4e+02 Score=27.91 Aligned_cols=36 Identities=14% Similarity=0.207 Sum_probs=25.1
Q ss_pred ceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 263 SVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKP 300 (473)
Q Consensus 263 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 300 (473)
.+++++.|+.+ ...-+..++++|.+.|++|.++++.
T Consensus 22 rIl~~~~~~~G--Hv~p~l~La~~L~~~Gh~V~v~~~~ 57 (415)
T 3rsc_A 22 HLLIVNVASHG--LILPTLTVVTELVRRGHRVSYVTAG 57 (415)
T ss_dssp EEEEECCSCHH--HHGGGHHHHHHHHHTTCEEEEEECG
T ss_pred EEEEEeCCCcc--ccccHHHHHHHHHHCCCEEEEEeCH
Confidence 37778777554 2233457888888889999888753
No 287
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=23.27 E-value=78 Score=28.91 Aligned_cols=40 Identities=8% Similarity=0.178 Sum_probs=28.9
Q ss_pred CCCCCceEEEEcCCCccCHHH-HHHHHHHHHhCCCcEEEEEcC
Q 043168 1 MAQRKENIVMFPLMAQGHIIP-FLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P-~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
|.+ ++||+++..+..++... ...+.+.|.+ +|++|.+..+
T Consensus 1 m~~-m~ki~iI~n~~~~~~~~~~~~l~~~L~~-~g~~v~~~~~ 41 (307)
T 1u0t_A 1 MTA-HRSVLLVVHTGRDEATETARRVEKVLGD-NKIALRVLSA 41 (307)
T ss_dssp -----CEEEEEESSSGGGGSHHHHHHHHHHHT-TTCEEEEEC-
T ss_pred CCC-CCEEEEEEeCCCHHHHHHHHHHHHHHHH-CCCEEEEecc
Confidence 543 46899999998887654 5678899999 9999887653
No 288
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=23.25 E-value=2.7e+02 Score=28.00 Aligned_cols=82 Identities=13% Similarity=0.036 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccC-hHHhhc-------ccccc
Q 043168 278 SQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAP-QVEILS-------HKSIS 349 (473)
Q Consensus 278 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~lL~-------~~~~~ 349 (473)
..-+.+++.|.+.|++.++.+.+.. ...+.+.+.+ .+++....-.. +.+.+. .-..+
T Consensus 32 ~~a~~lv~~L~~~GV~~vFg~PG~~--------------~~~l~dal~~-~~~i~~i~~~hE~~Aa~aA~GyAr~tgkpg 96 (604)
T 2x7j_A 32 HYIGSFIDEFALSGITDAVVCPGSR--------------STPLAVLCAA-HPDISVHVQIDERSAGFFALGLAKAKQRPV 96 (604)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCST--------------THHHHHHHHH-CTTCEEEECSSHHHHHHHHHHHHHHHTSCE
T ss_pred HHHHHHHHHHHHcCCCEEEECcCcc--------------cHHHHHHHHh-CCCceEEEecChHHHHHHHHHHHHhhCCCE
Confidence 3456688999999999988876542 1122222211 22233221111 111110 12345
Q ss_pred eeeeccCh------hhHHHHHhcCCCEEecc
Q 043168 350 AFLSHCGW------NSVLEALSHGVPIIGWP 374 (473)
Q Consensus 350 ~~I~HgG~------gs~~eal~~GvP~i~~P 374 (473)
++++|.|- +.+++|-+.++|+|++-
T Consensus 97 v~~~TsGpG~~N~~~gia~A~~~~vPlv~It 127 (604)
T 2x7j_A 97 LLICTSGTAAANFYPAVVEAHYSRVPIIVLT 127 (604)
T ss_dssp EEEECSSHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred EEEECChhHHHHHHHHHHHHhhcCCCEEEEe
Confidence 78999996 47889999999999974
No 289
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=23.20 E-value=69 Score=27.61 Aligned_cols=43 Identities=12% Similarity=0.098 Sum_probs=32.3
Q ss_pred eEEEEcCCCccCHHHHHHHHHH-HHhCCCcEEEEEcCCcchhhhh
Q 043168 7 NIVMFPLMAQGHIIPFLALALH-LENTNRYTITFVNTPSNLKKLK 50 (473)
Q Consensus 7 ~Il~~~~~~~GHv~P~l~LA~~-L~~~rGh~Vt~~~~~~~~~~v~ 50 (473)
=+++...|+.|-..=++.+|.. +.+ .|..|.|++.+...+.+.
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~-~~~~v~~~s~E~~~~~~~ 75 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEE-YGEPGVFVTLEERARDLR 75 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHH-HCCCEEEEESSSCHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHh-cCCCceeecccCCHHHHH
Confidence 3577777899999999998755 556 688899999776555443
No 290
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=22.99 E-value=1.3e+02 Score=26.42 Aligned_cols=37 Identities=5% Similarity=0.024 Sum_probs=21.2
Q ss_pred eEEEEecCccc-CCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 264 VIYVSFGSQNT-IAASQMMQLAMALEACGKNFIWVVKP 300 (473)
Q Consensus 264 ~V~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~ 300 (473)
.|.|.+.+... .....+..+.+++++.|+.+++....
T Consensus 10 ~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 47 (293)
T 3l6u_A 10 IVGFTIVNDKHEFAQRLINAFKAEAKANKYEALVATSQ 47 (293)
T ss_dssp EEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred EEEEEEecCCcHHHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 45554544322 12334455666777789998876543
No 291
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=22.97 E-value=72 Score=28.80 Aligned_cols=40 Identities=13% Similarity=0.059 Sum_probs=24.0
Q ss_pred CCCCCceEEEEcCCCccCHHH-HHHHHHHHHhCCCcEEEEEc
Q 043168 1 MAQRKENIVMFPLMAQGHIIP-FLALALHLENTNRYTITFVN 41 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P-~l~LA~~L~~~rGh~Vt~~~ 41 (473)
|...++||+++..|..++... .-.+.+.|.+ +|++|.+..
T Consensus 1 m~~~mkki~ii~np~~~~~~~~~~~i~~~l~~-~g~~v~~~~ 41 (292)
T 2an1_A 1 MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCD-QGYEVIVEQ 41 (292)
T ss_dssp ---CCCEEEEECC-------CHHHHHHHHHHH-TTCEEEEEH
T ss_pred CCCcCcEEEEEEcCCCHHHHHHHHHHHHHHHH-CCCEEEEec
Confidence 555557899999987766655 4567889999 999987754
No 292
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=22.97 E-value=3.2e+02 Score=26.17 Aligned_cols=32 Identities=13% Similarity=0.281 Sum_probs=22.0
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCC-cEEEEEc
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNR-YTITFVN 41 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rG-h~Vt~~~ 41 (473)
.++||+++..++..| +||+.|.+ .+ .+.+++.
T Consensus 20 ~~m~ilvlG~ggre~-----ala~~l~~-s~~v~~v~~~ 52 (442)
T 3lp8_A 20 GSMNVLVIGSGGREH-----SMLHHIRK-STLLNKLFIA 52 (442)
T ss_dssp CCEEEEEEECSHHHH-----HHHHHHTT-CTTEEEEEEE
T ss_pred CCCEEEEECCChHHH-----HHHHHHHh-CCCCCEEEEE
Confidence 356899998775544 68999988 54 4555554
No 293
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=22.92 E-value=57 Score=32.15 Aligned_cols=35 Identities=11% Similarity=-0.081 Sum_probs=27.5
Q ss_pred HHHHHHHhhhhhccCCCCCeEEEeCCCcchHHHHHHHhCCcEEEE
Q 043168 100 PHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALF 144 (473)
Q Consensus 100 ~~l~~~l~~~~~~~~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~ 144 (473)
..+.+++++. +||++|... ....+|+++|||++.+
T Consensus 391 ~el~~~i~~~-------~pDL~ig~~---~~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 391 RVLLKTVDEY-------QADILIAGG---RNMYTALKGRVPFLDI 425 (483)
T ss_dssp HHHHHHHHHT-------TCSEEECCG---GGHHHHHHTTCCBCCC
T ss_pred HHHHHHHHhc-------CCCEEEECC---chhHHHHHcCCCEEEe
Confidence 3456777788 999999864 3567899999999865
No 294
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=22.87 E-value=80 Score=27.96 Aligned_cols=38 Identities=16% Similarity=0.150 Sum_probs=26.6
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
|...+.|+++++.++.| =-.++|+.|.+ +|++|+++.-
T Consensus 1 m~~~~~k~vlVTGas~g---IG~~ia~~l~~-~G~~V~~~~r 38 (278)
T 1spx_A 1 MTRFAEKVAIITGSSNG---IGRATAVLFAR-EGAKVTITGR 38 (278)
T ss_dssp -CTTTTCEEEETTTTSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCCCCCCEEEEeCCCch---HHHHHHHHHHH-CCCEEEEEeC
Confidence 55444577778766543 24578999999 9999988763
No 295
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=22.75 E-value=1.5e+02 Score=22.85 Aligned_cols=41 Identities=5% Similarity=-0.161 Sum_probs=29.5
Q ss_pred EEEcCCCcc--CHHHHHHHHHHHHhCCCcEE-EEEcCCcchhhhh
Q 043168 9 VMFPLMAQG--HIIPFLALALHLENTNRYTI-TFVNTPSNLKKLK 50 (473)
Q Consensus 9 l~~~~~~~G--Hv~P~l~LA~~L~~~rGh~V-t~~~~~~~~~~v~ 50 (473)
++++.+.+| .....+.+|..+.+ .||+| .++-..+......
T Consensus 5 iiv~~~p~~~~~~~~al~~a~a~~~-~g~~v~~vff~~dGV~~~~ 48 (130)
T 2hy5_A 5 LQINEGPYQHQASDSAYQFAKAALE-KGHEIFRVFFYHDGVNNST 48 (130)
T ss_dssp EEECSCTTTSTHHHHHHHHHHHHHH-TTCEEEEEEECGGGGGGGB
T ss_pred EEEeCCCCCcHHHHHHHHHHHHHHh-cCCeeCEEEEechHHHHHh
Confidence 445555554 35577899999999 99999 8888776555444
No 296
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=22.58 E-value=1.3e+02 Score=25.89 Aligned_cols=36 Identities=17% Similarity=0.114 Sum_probs=26.9
Q ss_pred CCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 3 QRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 3 ~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
+.+-|+++++.++.| =-.++|+.|.+ +|++|+++..
T Consensus 4 ~l~~k~vlITGas~g---IG~~~a~~l~~-~G~~v~~~~~ 39 (255)
T 3icc_A 4 MLKGKVALVTGASRG---IGRAIAKRLAN-DGALVAIHYG 39 (255)
T ss_dssp TTTTCEEEETTCSSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred ccCCCEEEEECCCCh---HHHHHHHHHHH-CCCeEEEEeC
Confidence 334578888877655 24688999999 9999988653
No 297
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=22.50 E-value=1.5e+02 Score=27.63 Aligned_cols=34 Identities=18% Similarity=0.286 Sum_probs=23.7
Q ss_pred eEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEc
Q 043168 264 VIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVK 299 (473)
Q Consensus 264 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~ 299 (473)
+++++.|+.+ ....+..++++|.+.|++|.+++.
T Consensus 18 Il~~~~~~~g--h~~~~~~La~~L~~~GheV~v~~~ 51 (398)
T 4fzr_A 18 ILVIAGCSEG--FVMPLVPLSWALRAAGHEVLVAAS 51 (398)
T ss_dssp EEEECCSSHH--HHGGGHHHHHHHHHTTCEEEEEEE
T ss_pred EEEEcCCCcc--hHHHHHHHHHHHHHCCCEEEEEcC
Confidence 6777776433 122356788999999999988775
No 298
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=22.46 E-value=46 Score=25.76 Aligned_cols=32 Identities=13% Similarity=0.109 Sum_probs=24.1
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
+++|+++..+..| ..+++.|.+ .|++|+++..
T Consensus 6 ~~~v~I~G~G~iG-----~~~a~~l~~-~g~~v~~~d~ 37 (144)
T 2hmt_A 6 NKQFAVIGLGRFG-----GSIVKELHR-MGHEVLAVDI 37 (144)
T ss_dssp CCSEEEECCSHHH-----HHHHHHHHH-TTCCCEEEES
T ss_pred CCcEEEECCCHHH-----HHHHHHHHH-CCCEEEEEeC
Confidence 4478888755444 467899999 9999988764
No 299
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=22.39 E-value=82 Score=27.51 Aligned_cols=35 Identities=11% Similarity=0.084 Sum_probs=24.3
Q ss_pred HHHhhhhhccCCCCCeEEEeCCCcc--hHHHHHHHhCCcEEEEc
Q 043168 104 KLINGLIDEQNGHKPVCIIADMFFA--WSAEIAQEYGIFNALFV 145 (473)
Q Consensus 104 ~~l~~~~~~~~~~~pDlVI~D~~~~--~~~~~A~~~giP~v~~~ 145 (473)
+.|.+. +||+||...... ....--+..|+|++.+.
T Consensus 53 E~i~~l-------~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 53 EGILAM-------KPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp HHHHTT-------CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHcc-------CCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 455577 899999877543 23334467899999874
No 300
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=22.36 E-value=94 Score=28.43 Aligned_cols=32 Identities=22% Similarity=0.309 Sum_probs=26.9
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
++||.|+..|..| ..+|..|.+ .||+|+++..
T Consensus 31 ~~~I~iIG~G~mG-----~~~a~~l~~-~G~~V~~~dr 62 (320)
T 4dll_A 31 ARKITFLGTGSMG-----LPMARRLCE-AGYALQVWNR 62 (320)
T ss_dssp CSEEEEECCTTTH-----HHHHHHHHH-TTCEEEEECS
T ss_pred CCEEEEECccHHH-----HHHHHHHHh-CCCeEEEEcC
Confidence 4589999888888 468899999 9999998763
No 301
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=22.32 E-value=1.5e+02 Score=24.03 Aligned_cols=45 Identities=11% Similarity=0.060 Sum_probs=36.3
Q ss_pred ceE-EEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhh
Q 043168 6 ENI-VMFPLMAQGHIIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (473)
Q Consensus 6 ~~I-l~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~ 51 (473)
.++ +++..+..--+.|.+-||..-++ -|++|+++.+-.....+.+
T Consensus 5 ~kl~II~~sG~~dka~~a~ilA~~AaA-~G~eV~iFfTf~Gl~~l~K 50 (160)
T 3pnx_A 5 KKMNLLLFSGDYDKALASLIIANAARE-MEIEVTIFCAFWGLLLLRD 50 (160)
T ss_dssp CEEEEEECCCCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGGGGGBC
T ss_pred CcEEEEEecCCHHHHHHHHHHHHHHHH-cCCCEEEEEeehhHHHhcc
Confidence 344 55556788888899999999999 9999999998877777765
No 302
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=22.29 E-value=88 Score=29.14 Aligned_cols=40 Identities=18% Similarity=0.158 Sum_probs=33.8
Q ss_pred CceEEEEcC-CCccCHHHHHHHHHHHHhCCCcEEEEEcCCcc
Q 043168 5 KENIVMFPL-MAQGHIIPFLALALHLENTNRYTITFVNTPSN 45 (473)
Q Consensus 5 ~~~Il~~~~-~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~ 45 (473)
+++|+|++. |+-|-.+-...||..|++ +|++|.++..+..
T Consensus 25 ~~~i~v~sgKGGvGKTTvA~~LA~~lA~-~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 25 GTKYIMFGGKGGVGKTTMSAATGVYLAE-KGLKVVIVSTDPA 65 (349)
T ss_dssp SCEEEEEECSSSTTHHHHHHHHHHHHHH-SSCCEEEEECCTT
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHH-CCCeEEEEeCCCC
Confidence 446665554 799999999999999999 9999999997763
No 303
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=22.28 E-value=1.1e+02 Score=23.83 Aligned_cols=42 Identities=14% Similarity=0.083 Sum_probs=0.0
Q ss_pred HHHHHHHhhhhhccCCCCCeEEEeCCCcc--hHHHHHHHh-------CCcEEEEcccc
Q 043168 100 PHFRKLINGLIDEQNGHKPVCIIADMFFA--WSAEIAQEY-------GIFNALFVGGG 148 (473)
Q Consensus 100 ~~l~~~l~~~~~~~~~~~pDlVI~D~~~~--~~~~~A~~~-------giP~v~~~~~~ 148 (473)
....+.++.. +||+||.|.... .+..+++.+ .+|+|.++...
T Consensus 41 ~~al~~l~~~-------~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 41 REAVRFLSLT-------RPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILS 91 (154)
T ss_dssp HHHHHHHTTC-------CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCC
T ss_pred HHHHHHHHhC-------CCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCC
No 304
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=22.23 E-value=89 Score=28.44 Aligned_cols=39 Identities=5% Similarity=-0.067 Sum_probs=29.1
Q ss_pred CCceEEEEcCCCcc-C---HHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 4 RKENIVMFPLMAQG-H---IIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 4 ~~~~Il~~~~~~~G-H---v~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
+++||+++..+-.+ | +.....++++|.+ .||+|+.+.+.
T Consensus 12 ~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~-~g~~v~~i~~~ 54 (317)
T 4eg0_A 12 RFGKVAVLFGGESAEREVSLTSGRLVLQGLRD-AGIDAHPFDPA 54 (317)
T ss_dssp GGCEEEEECCCSSTTHHHHHHHHHHHHHHHHH-TTCEEEEECTT
T ss_pred hcceEEEEECCCCCcceeeHHHHHHHHHHHHH-CCCEEEEEeCC
Confidence 45689888865322 2 3467789999999 99999998854
No 305
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=22.20 E-value=73 Score=27.10 Aligned_cols=39 Identities=13% Similarity=0.062 Sum_probs=29.4
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCC-CcEEEEEcCCcc
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTN-RYTITFVNTPSN 45 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~r-Gh~Vt~~~~~~~ 45 (473)
++||+|+..++.-.+. +...++.|.+ + |++|.+++....
T Consensus 3 m~kV~ill~~g~~~~E-~~~~~~~l~~-~~~~~v~~vs~~~~ 42 (206)
T 3f5d_A 3 LKKALFLILDQYADWE-GVYLASALNQ-REDWSVHTVSLDPI 42 (206)
T ss_dssp CEEEEEECCSSBCTTT-SHHHHHHHHT-STTEEEEEEESSSE
T ss_pred ccEEEEEEcCCCcHHH-HHHHHHHHhc-cCCeEEEEEECCCC
Confidence 4589888888776644 4466788888 7 999999997643
No 306
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=22.03 E-value=81 Score=27.44 Aligned_cols=37 Identities=14% Similarity=0.124 Sum_probs=29.9
Q ss_pred eEEEEc--CCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 7 NIVMFP--LMAQGHIIPFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 7 ~Il~~~--~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
+++.+. -++-|-..-...||..|.+ +|++|.++-...
T Consensus 3 ~vi~v~s~kgGvGKTt~a~~LA~~la~-~g~~VlliD~D~ 41 (260)
T 3q9l_A 3 RIIVVTSGKGGVGKTTSSAAIATGLAQ-KGKKTVVIDFAI 41 (260)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHH-TTCCEEEEECCC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHh-CCCcEEEEECCC
Confidence 554443 3688999999999999999 999999987554
No 307
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=22.03 E-value=4.3e+02 Score=23.72 Aligned_cols=62 Identities=18% Similarity=0.182 Sum_probs=36.2
Q ss_pred ccChHHhhcccccceeeeccChh----hHHHHHhcCCCEEec-ccccc--hh-hhHHHHHHHHcceEEEec
Q 043168 336 WAPQVEILSHKSISAFLSHCGWN----SVLEALSHGVPIIGW-PLAAE--QF-YNSKLLEEVIGVCVEVAR 398 (473)
Q Consensus 336 ~~p~~~lL~~~~~~~~I~HgG~g----s~~eal~~GvP~i~~-P~~~D--Q~-~~a~~v~~~lG~G~~l~~ 398 (473)
+-...+++..++++++|.--... .+.+++.+|+++++= |+..+ +. ...+..++. |+-+.+..
T Consensus 51 ~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~-g~~~~~~~ 120 (332)
T 2glx_A 51 VTSVEELVGDPDVDAVYVSTTNELHREQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREA-GVVLGTNH 120 (332)
T ss_dssp BSCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH-TCCEEECC
T ss_pred cCCHHHHhcCCCCCEEEEeCChhHhHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHc-CCEEEEee
Confidence 34556777765566666544433 456789999999874 76543 32 222333444 76665543
No 308
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=22.01 E-value=3.4e+02 Score=22.50 Aligned_cols=143 Identities=15% Similarity=0.201 Sum_probs=80.2
Q ss_pred CceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChHH
Q 043168 262 NSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVE 341 (473)
Q Consensus 262 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 341 (473)
++.|-|-+||.. +....+++...|+..|+++-+-+.+.+ ..|+.+.+-.+ +.
T Consensus 21 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaH------------R~p~~l~~~~~-------------~a- 72 (182)
T 1u11_A 21 APVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSAH------------RTPDRLADYAR-------------TA- 72 (182)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT------------TCHHHHHHHHH-------------HT-
T ss_pred CCEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEccc------------CCHHHHHHHHH-------------HH-
Confidence 345778888876 677888888999998888766555442 14444322110 00
Q ss_pred hhcccccceeeeccCh----hhHHHHHhcCCCEEecccccch---hhhHHHHHH--HHcceE-EEecccCCccCHHHHHH
Q 043168 342 ILSHKSISAFLSHCGW----NSVLEALSHGVPIIGWPLAAEQ---FYNSKLLEE--VIGVCV-EVARGMNCEVSKENLSA 411 (473)
Q Consensus 342 lL~~~~~~~~I~HgG~----gs~~eal~~GvP~i~~P~~~DQ---~~~a~~v~~--~lG~G~-~l~~~~~~~~~~~~l~~ 411 (473)
..-.++.+|.=.|. .++..++ .-+|+|.+|..... .+---.+.. . |+.+ .+..++....++.-++.
T Consensus 73 --~~~g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a~~~nAallAa 148 (182)
T 1u11_A 73 --AERGLNVIIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGASGAKNAALLAA 148 (182)
T ss_dssp --TTTTCCEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHHHHHHHHHHHH
T ss_pred --HhCCCcEEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCccchHHHHHHH
Confidence 00012345554443 2444444 58999999986421 111122332 3 4442 12221112345666665
Q ss_pred HHHHHHcCChhhHHHHHHHHHHHHHHHHhh
Q 043168 412 KFELVMNETEKGMDLRKKASEVEMIIKNAV 441 (473)
Q Consensus 412 ai~~~l~~~~~~~~~~~~a~~~~~~~~~a~ 441 (473)
.|- -+.|+ .++++.+.+++.+++.+
T Consensus 149 qIl-a~~d~----~l~~kL~~~r~~~~~~v 173 (182)
T 1u11_A 149 SIL-ALYNP----ALAARLETWRALQTASV 173 (182)
T ss_dssp HHH-GGGCH----HHHHHHHHHHHHHHHHS
T ss_pred HHH-ccCCH----HHHHHHHHHHHHHHHHH
Confidence 554 45677 79999999999887654
No 309
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=21.86 E-value=2.1e+02 Score=26.25 Aligned_cols=81 Identities=16% Similarity=0.031 Sum_probs=0.0
Q ss_pred CCceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChH
Q 043168 261 CNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQV 340 (473)
Q Consensus 261 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 340 (473)
.+-.|+++--|-.. +.+..+.+.|+..+..+.+...... ....+-..+...
T Consensus 30 ~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~~-----------~~~~~~~~~~~~--------------- 80 (332)
T 2bon_A 30 PASLLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWEK-----------GDAARYVEEARK--------------- 80 (332)
T ss_dssp CCEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCST-----------THHHHHHHHHHH---------------
T ss_pred ceEEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecCc-----------chHHHHHHHHHh---------------
Q ss_pred HhhcccccceeeeccChhhHHHHH--------hcCCCEEeccc
Q 043168 341 EILSHKSISAFLSHCGWNSVLEAL--------SHGVPIIGWPL 375 (473)
Q Consensus 341 ~lL~~~~~~~~I~HgG~gs~~eal--------~~GvP~i~~P~ 375 (473)
...+++|.-||=||+.|++ ..++|+.++|.
T Consensus 81 -----~~~d~vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 81 -----FGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPL 118 (332)
T ss_dssp -----HTCSEEEEEESHHHHHHHHHHHHHCCSSCCCEEEEEEC
T ss_pred -----cCCCEEEEEccchHHHHHHHHHhhcccCCCCeEEEecC
No 310
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=21.82 E-value=2.4e+02 Score=26.43 Aligned_cols=35 Identities=23% Similarity=0.380 Sum_probs=25.3
Q ss_pred eEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 264 VIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKP 300 (473)
Q Consensus 264 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 300 (473)
+++++.||.+ ...-+..+..+|.+.|.+|.+.++.
T Consensus 3 Ili~~~gt~G--hv~p~~~La~~L~~~Gh~V~v~~~~ 37 (404)
T 3h4t_A 3 VLITGCGSRG--DTEPLVALAARLRELGADARMCLPP 37 (404)
T ss_dssp EEEEEESSHH--HHHHHHHHHHHHHHTTCCEEEEECG
T ss_pred EEEEeCCCCc--cHHHHHHHHHHHHHCCCeEEEEeCH
Confidence 6778888764 2233556888898899999887754
No 311
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=21.80 E-value=1.2e+02 Score=26.91 Aligned_cols=31 Identities=6% Similarity=-0.097 Sum_probs=25.8
Q ss_pred eEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEc
Q 043168 7 NIVMFPLMAQGHIIPFLALALHLENTNRYTITFVN 41 (473)
Q Consensus 7 ~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~ 41 (473)
|+++++.++.| =-.++|++|.+ +|++|.+..
T Consensus 12 K~alVTGas~G---IG~aia~~la~-~Ga~V~~~~ 42 (261)
T 4h15_A 12 KRALITAGTKG---AGAATVSLFLE-LGAQVLTTA 42 (261)
T ss_dssp CEEEESCCSSH---HHHHHHHHHHH-TTCEEEEEE
T ss_pred CEEEEeccCcH---HHHHHHHHHHH-cCCEEEEEE
Confidence 89999988766 24678999999 999998876
No 312
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=21.68 E-value=2.9e+02 Score=23.15 Aligned_cols=81 Identities=19% Similarity=0.055 Sum_probs=48.8
Q ss_pred ChHHhhcccccceeeeccChhhHHH-------------HHhcCCCEEecccc----cch---hhhHHHHHHHHcceEEEe
Q 043168 338 PQVEILSHKSISAFLSHCGWNSVLE-------------ALSHGVPIIGWPLA----AEQ---FYNSKLLEEVIGVCVEVA 397 (473)
Q Consensus 338 p~~~lL~~~~~~~~I~HgG~gs~~e-------------al~~GvP~i~~P~~----~DQ---~~~a~~v~~~lG~G~~l~ 397 (473)
.+-++...+++ .+|.-|-+||+.. ++..++|++++|-. +.. ..|..++.+. |+=+...
T Consensus 74 ~hi~l~~~aD~-~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~-G~~iv~p 151 (194)
T 1p3y_1 74 SHVEIGRWADI-YCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRKD-GHIVIEP 151 (194)
T ss_dssp CHHHHHHHCSE-EEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHHH-TCEECCC
T ss_pred CcccccccCCE-EEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHHHC-CCEEECC
Confidence 34555555564 7788888776653 36688999999953 222 3455566655 7633322
Q ss_pred c-c-----------c-CCccCHHHHHHHHHHHHcCC
Q 043168 398 R-G-----------M-NCEVSKENLSAKFELVMNET 420 (473)
Q Consensus 398 ~-~-----------~-~~~~~~~~l~~ai~~~l~~~ 420 (473)
. + . .+-.+.++|.+.+.+.|.+.
T Consensus 152 ~~g~~f~lacg~~g~~g~~~~~~~iv~~v~~~l~~~ 187 (194)
T 1p3y_1 152 VEIMAFEIATGTRKPNRGLITPDKALLAIEKGFKER 187 (194)
T ss_dssp BCCC------------CBCCCHHHHHHHHHHHCC--
T ss_pred CCCcccccccCCcCcCCCCCCHHHHHHHHHHHhccc
Confidence 1 1 1 23357888888888887544
No 313
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=21.62 E-value=1e+02 Score=29.95 Aligned_cols=33 Identities=18% Similarity=0.225 Sum_probs=26.5
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
+.+||+|+..+..|= .+|+.|++ +||+|+..=.
T Consensus 8 ~~k~v~viG~G~sG~-----s~A~~l~~-~G~~V~~~D~ 40 (451)
T 3lk7_A 8 ENKKVLVLGLARSGE-----AAARLLAK-LGAIVTVNDG 40 (451)
T ss_dssp TTCEEEEECCTTTHH-----HHHHHHHH-TTCEEEEEES
T ss_pred CCCEEEEEeeCHHHH-----HHHHHHHh-CCCEEEEEeC
Confidence 346999999876653 46999999 9999998754
No 314
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=21.62 E-value=76 Score=31.62 Aligned_cols=34 Identities=24% Similarity=0.343 Sum_probs=26.9
Q ss_pred HHHHHHhhhhhccCCCCCeEEEeCCCcchHHHHHHHhCCcEEEE
Q 043168 101 HFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALF 144 (473)
Q Consensus 101 ~l~~~l~~~~~~~~~~~pDlVI~D~~~~~~~~~A~~~giP~v~~ 144 (473)
.+.+++++. +||++|.+. ....+|+++|||++.+
T Consensus 340 el~~~i~~~-------~pDL~ig~~---~~~~~a~~~giP~~~i 373 (525)
T 3aek_B 340 EVEKAIEAA-------APELILGTQ---MERNIAKKLGLPCAVI 373 (525)
T ss_dssp HHHHHHHHH-------CCSEEEECH---HHHHHHHHHTCCEEEC
T ss_pred HHHHHHhhc-------CCCEEEecc---hhHHHHHHcCCCEEEe
Confidence 455677777 899999874 4667889999999975
No 315
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=21.58 E-value=1.4e+02 Score=22.29 Aligned_cols=36 Identities=11% Similarity=0.155 Sum_probs=25.2
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEc
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVN 41 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~ 41 (473)
++||++++..+.|-=.=.-.+-+.+.. +|.++.+-.
T Consensus 3 mkkIll~Cg~G~sTS~l~~k~~~~~~~-~gi~~~i~a 38 (106)
T 1e2b_A 3 KKHIYLFSSAGMSTSLLVSKMRAQAEK-YEVPVIIEA 38 (106)
T ss_dssp CEEEEEECSSSTTTHHHHHHHHHHHHH-SCCSEEEEE
T ss_pred CcEEEEECCCchhHHHHHHHHHHHHHH-CCCCeEEEE
Confidence 468999998766554444477788888 998765443
No 316
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=21.58 E-value=3.5e+02 Score=22.46 Aligned_cols=144 Identities=20% Similarity=0.263 Sum_probs=79.6
Q ss_pred CceEEEEecCcccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCccchhcccCCchhHHHhhccCCCCeEEecccChHH
Q 043168 262 NSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLGFDLNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVE 341 (473)
Q Consensus 262 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 341 (473)
-|.|-|-+||.. +....+++...|+..|+++-+-+.+.+ ..|+.+.+-.+ +.+
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaH------------R~p~~l~~~~~-------------~a~ 65 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSAH------------RTPDRMFEYAK-------------NAE 65 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCTT------------TCHHHHHHHHH-------------HTT
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEccc------------CCHHHHHHHHH-------------HHH
Confidence 457888888887 677888899999999988766655442 14444332111 000
Q ss_pred hhcccccceeeeccCh----hhHHHHHhcCCCEEecccccchhhhHHHHHHHHcc--eEEEec-ccCCccCHHHHHHHHH
Q 043168 342 ILSHKSISAFLSHCGW----NSVLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGV--CVEVAR-GMNCEVSKENLSAKFE 414 (473)
Q Consensus 342 lL~~~~~~~~I~HgG~----gs~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~--G~~l~~-~~~~~~~~~~l~~ai~ 414 (473)
-.. ++.+|.=+|. .++..++ .-.|+|.+|.......=...+-..+.. |+-+.. ..+...++.-++..|-
T Consensus 66 -~~g--~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~Id~~~nAa~lAaqIl 141 (183)
T 1o4v_A 66 -ERG--IEVIIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAINNAKNAGILAASIL 141 (183)
T ss_dssp -TTT--CCEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECCTTCHHHHHHHHHHHH
T ss_pred -hCC--CcEEEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCchHHHHHHHHHH
Confidence 011 2345554443 2444444 789999999865211111111112222 321111 0114456666666664
Q ss_pred HHHcCChhhHHHHHHHHHHHHHHHHhh
Q 043168 415 LVMNETEKGMDLRKKASEVEMIIKNAV 441 (473)
Q Consensus 415 ~~l~~~~~~~~~~~~a~~~~~~~~~a~ 441 (473)
-+.|+ .++++.+.++..++..+
T Consensus 142 -a~~d~----~l~~kL~~~r~~~~~~v 163 (183)
T 1o4v_A 142 -GIKYP----EIARKVKEYKERMKREV 163 (183)
T ss_dssp -HTTCH----HHHHHHHHHHHHHHHHH
T ss_pred -hcCCH----HHHHHHHHHHHHHHHHH
Confidence 45677 78888888888877554
No 317
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=21.58 E-value=49 Score=29.39 Aligned_cols=33 Identities=15% Similarity=0.156 Sum_probs=24.3
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
++||++.. + |.+= ..|++.|.+ +||+|+.++-.
T Consensus 5 ~~~ilVtG--a-G~iG--~~l~~~L~~-~g~~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSFG--H-GYTA--RVLSRALAP-QGWRIIGTSRN 37 (286)
T ss_dssp CCEEEEET--C-CHHH--HHHHHHHGG-GTCEEEEEESC
T ss_pred cCcEEEEC--C-cHHH--HHHHHHHHH-CCCEEEEEEcC
Confidence 35777774 4 6543 367899999 99999998843
No 318
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=21.49 E-value=91 Score=26.33 Aligned_cols=20 Identities=20% Similarity=0.132 Sum_probs=16.7
Q ss_pred HHHHHHHH-hCCCcEEEEEcCC
Q 043168 23 LALALHLE-NTNRYTITFVNTP 43 (473)
Q Consensus 23 l~LA~~L~-~~rGh~Vt~~~~~ 43 (473)
..+++.|. + +||+|+.+.-.
T Consensus 19 ~~~~~~l~~~-~g~~V~~~~r~ 39 (221)
T 3r6d_A 19 QXLTATLLTY-TDMHITLYGRQ 39 (221)
T ss_dssp HHHHHHHHHH-CCCEEEEEESS
T ss_pred HHHHHHHHhc-CCceEEEEecC
Confidence 57889999 9 99999988743
No 319
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=21.44 E-value=64 Score=30.29 Aligned_cols=29 Identities=17% Similarity=0.158 Sum_probs=24.4
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEE
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRYTITFV 40 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~ 40 (473)
+||+++..+-.| +.+|..|++ +||+|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~-~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRK-HGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHH-TTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHh-CCCCEEEE
Confidence 489888877555 788999999 99999988
No 320
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=21.37 E-value=84 Score=26.15 Aligned_cols=39 Identities=18% Similarity=0.220 Sum_probs=27.0
Q ss_pred CCCCCceEEEEcCCCccCHHHHHH-HHHHHHhCCCcEEEEEcC
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLA-LALHLENTNRYTITFVNT 42 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~-LA~~L~~~rGh~Vt~~~~ 42 (473)
|+ .++||+++... .|+..-+.. +++.|.+ .|++|.++.-
T Consensus 1 M~-~mmkilii~~S-~g~T~~la~~i~~~l~~-~g~~v~~~~l 40 (199)
T 2zki_A 1 MS-CKPNILVLFYG-YGSIVELAKEIGKGAEE-AGAEVKIRRV 40 (199)
T ss_dssp ---CCCEEEEEECC-SSHHHHHHHHHHHHHHH-HSCEEEEEEC
T ss_pred CC-CCcEEEEEEeC-ccHHHHHHHHHHHHHHh-CCCEEEEEeh
Confidence 44 34588887777 888776554 5677888 8999887753
No 321
>4hps_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 1.55A {Xenorhabdus bovienii} PDB: 4gxh_A
Probab=21.33 E-value=50 Score=28.85 Aligned_cols=27 Identities=19% Similarity=0.169 Sum_probs=21.0
Q ss_pred CceEEEEcCC-Ccc-CHHHHHHHHHHHHh
Q 043168 5 KENIVMFPLM-AQG-HIIPFLALALHLEN 31 (473)
Q Consensus 5 ~~~Il~~~~~-~~G-Hv~P~l~LA~~L~~ 31 (473)
+++||+..++ +.| -+||...++++|..
T Consensus 23 mk~VLvTGF~PF~g~~~NPS~~~v~~L~~ 51 (228)
T 4hps_A 23 MKTILVTAFDPFGGEAINPSWEAIKPLQG 51 (228)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHGGGTT
T ss_pred CCEEEEEeccCCCCCCCChHHHHHHHhcC
Confidence 5689888875 444 47999999999977
No 322
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=21.32 E-value=82 Score=28.95 Aligned_cols=38 Identities=16% Similarity=0.096 Sum_probs=32.5
Q ss_pred ceEEEEc-CCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 6 ENIVMFP-LMAQGHIIPFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 6 ~~Il~~~-~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
++|+|++ -|+-|-.+-...||..|++ +|++|.++....
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~-~G~rVLlvD~D~ 52 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMAR-SGKKTLVISTDP 52 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHH-TTCCEEEEECCS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHH-CCCcEEEEeCCC
Confidence 3665554 4799999999999999999 999999999776
No 323
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=21.26 E-value=92 Score=27.83 Aligned_cols=34 Identities=18% Similarity=0.127 Sum_probs=25.7
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
+.|+++++.++.| =-.++|++|.+ +|++|+++.-
T Consensus 27 ~~k~~lVTGas~G---IG~aia~~la~-~G~~V~~~~r 60 (283)
T 3v8b_A 27 PSPVALITGAGSG---IGRATALALAA-DGVTVGALGR 60 (283)
T ss_dssp CCCEEEEESCSSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHH-CCCEEEEEeC
Confidence 4477788876654 24688999999 9999988764
No 324
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=21.25 E-value=1.4e+02 Score=30.50 Aligned_cols=41 Identities=20% Similarity=0.020 Sum_probs=27.4
Q ss_pred HHHHHHhhhhhccCCCCCeEEEeCCCcc-hHHHHHHHhCCcEEEEcccc
Q 043168 101 HFRKLINGLIDEQNGHKPVCIIADMFFA-WSAEIAQEYGIFNALFVGGG 148 (473)
Q Consensus 101 ~l~~~l~~~~~~~~~~~pDlVI~D~~~~-~~~~~A~~~giP~v~~~~~~ 148 (473)
.+.+.+++. +||+||+-.+.. ....+-..+...++-++++.
T Consensus 66 ~~~~~l~~~-------~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~sl 107 (660)
T 1z7e_A 66 LWVERIAQL-------SPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSL 107 (660)
T ss_dssp HHHHHHHHH-------CCSEEEEESCCSCCCHHHHTTCTTCEEEEESSS
T ss_pred HHHHHHHhc-------CCCEEEEcCcccccCHHHHhcCCCCeEEecCCc
Confidence 345677888 999999765533 34455566666778776663
No 325
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=21.24 E-value=1.7e+02 Score=21.00 Aligned_cols=30 Identities=20% Similarity=0.100 Sum_probs=19.9
Q ss_pred CCeEEEeCCCcc--hHHHHHHH-----hCCcEEEEcc
Q 043168 117 KPVCIIADMFFA--WSAEIAQE-----YGIFNALFVG 146 (473)
Q Consensus 117 ~pDlVI~D~~~~--~~~~~A~~-----~giP~v~~~~ 146 (473)
+||+||.|...+ .+..+.+. -.+|.+.++.
T Consensus 45 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~ 81 (116)
T 3a10_A 45 NYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTA 81 (116)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEES
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEEC
Confidence 899999998765 34443333 2578777754
No 326
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=21.20 E-value=68 Score=29.66 Aligned_cols=37 Identities=8% Similarity=0.269 Sum_probs=26.2
Q ss_pred CceEEEEcCCCcc-C---HHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 5 KENIVMFPLMAQG-H---IIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 5 ~~~Il~~~~~~~G-H---v~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
|+||+++..+..+ | +.....++++|.+ .||+|+.+..
T Consensus 3 ~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~-~g~~v~~i~~ 43 (343)
T 1e4e_A 3 RIKVAILFGGCSEEHDVSVKSAIEIAANINK-EKYEPLYIGI 43 (343)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCT-TTEEEEEEEE
T ss_pred CcEEEEEeCCCCCCcchhHHHHHHHHHHhhh-cCCEEEEEEE
Confidence 6688888754222 2 1245678999999 9999998864
No 327
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=21.14 E-value=88 Score=27.35 Aligned_cols=39 Identities=15% Similarity=0.034 Sum_probs=25.8
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
|+..+.|.++++.++.| =-.++|+.|.+ +|++|+++.-.
T Consensus 1 M~~l~~k~vlVTGas~g---IG~~ia~~l~~-~G~~V~~~~r~ 39 (256)
T 2d1y_A 1 MGLFAGKGVLVTGGARG---IGRAIAQAFAR-EGALVALCDLR 39 (256)
T ss_dssp -CTTTTCEEEEETTTSH---HHHHHHHHHHH-TTCEEEEEESS
T ss_pred CCCCCCCEEEEeCCCCH---HHHHHHHHHHH-CCCEEEEEeCC
Confidence 54444466677755432 23478999999 99999887643
No 328
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=21.09 E-value=4.2e+02 Score=24.09 Aligned_cols=62 Identities=23% Similarity=0.191 Sum_probs=37.2
Q ss_pred ccChHHhhcccccceeeeccCh----hhHHHHHhcCCCEEe-ccccc--chhhhH-HHHHHHHcceEEEec
Q 043168 336 WAPQVEILSHKSISAFLSHCGW----NSVLEALSHGVPIIG-WPLAA--EQFYNS-KLLEEVIGVCVEVAR 398 (473)
Q Consensus 336 ~~p~~~lL~~~~~~~~I~HgG~----gs~~eal~~GvP~i~-~P~~~--DQ~~~a-~~v~~~lG~G~~l~~ 398 (473)
|-...++|..+++++++----. --+.+||.+|+++++ -|+.. ++..-. +..++. |+-+.+..
T Consensus 71 ~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~-g~~~~v~~ 140 (340)
T 1zh8_A 71 FDSYEELLESGLVDAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKS-EKTVYIAE 140 (340)
T ss_dssp ESCHHHHHHSSCCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHC-SSCEEEEC
T ss_pred cCCHHHHhcCCCCCEEEEeCCchHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHc-CCeEEEEe
Confidence 4567888887777777654333 346689999999987 56653 332222 223334 65555543
No 329
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=21.09 E-value=3.3e+02 Score=24.78 Aligned_cols=62 Identities=13% Similarity=0.114 Sum_probs=38.4
Q ss_pred ccChHHhhcccccceeeeccChh----hHHHHHhcCCCEEe-ccccc--chh-hhHHHHHHHHcceEEEec
Q 043168 336 WAPQVEILSHKSISAFLSHCGWN----SVLEALSHGVPIIG-WPLAA--EQF-YNSKLLEEVIGVCVEVAR 398 (473)
Q Consensus 336 ~~p~~~lL~~~~~~~~I~HgG~g----s~~eal~~GvP~i~-~P~~~--DQ~-~~a~~v~~~lG~G~~l~~ 398 (473)
|-...++|..++++++|--.-.. .+.+|+.+|+++++ -|+.. ++- ...+...+. |+-+.+..
T Consensus 53 ~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~-g~~~~v~~ 122 (344)
T 3ezy_A 53 YKDPHELIEDPNVDAVLVCSSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKA-DVILFTGF 122 (344)
T ss_dssp ESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHH-TCCEEEEC
T ss_pred eCCHHHHhcCCCCCEEEEcCCCcchHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHh-CCcEEEee
Confidence 45667888866677777544444 36689999999987 47553 232 233334444 76666654
No 330
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=21.06 E-value=1.2e+02 Score=26.41 Aligned_cols=39 Identities=18% Similarity=-0.005 Sum_probs=27.3
Q ss_pred HHHHHHhhhhhccCCCCCeEEEeCCCcch-------HHHHHHHhCCcEEEE
Q 043168 101 HFRKLINGLIDEQNGHKPVCIIADMFFAW-------SAEIAQEYGIFNALF 144 (473)
Q Consensus 101 ~l~~~l~~~~~~~~~~~pDlVI~D~~~~~-------~~~~A~~~giP~v~~ 144 (473)
.+.++++.+.. +||+|++|..-.. |..+.-.+++|+|.+
T Consensus 92 ~~l~al~~L~~-----~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGV 137 (225)
T 2w36_A 92 LFLKAWEKLRT-----KPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGV 137 (225)
T ss_dssp HHHHHHTTCCS-----CCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHhcCC-----CCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEE
Confidence 34555665521 6999999986653 345667789999988
No 331
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=21.00 E-value=1.1e+02 Score=26.77 Aligned_cols=33 Identities=12% Similarity=-0.012 Sum_probs=24.9
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
-|.++++.++.| =-.++|++|.+ +|++|+++.-
T Consensus 8 gk~~lVTGas~g---IG~a~a~~l~~-~G~~V~~~~r 40 (255)
T 4eso_A 8 GKKAIVIGGTHG---MGLATVRRLVE-GGAEVLLTGR 40 (255)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHH-CCCEEEEEeC
Confidence 367777766554 23578999999 9999988763
No 332
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=20.92 E-value=1.2e+02 Score=26.64 Aligned_cols=34 Identities=12% Similarity=-0.006 Sum_probs=25.7
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
+-|+++++.++.| =-.++|+.|.+ +|++|+++..
T Consensus 26 ~gk~vlVTGas~g---IG~aia~~la~-~G~~V~~~~r 59 (266)
T 3grp_A 26 TGRKALVTGATGG---IGEAIARCFHA-QGAIVGLHGT 59 (266)
T ss_dssp TTCEEEESSTTSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHH-CCCEEEEEeC
Confidence 3477888876654 24578999999 9999988864
No 333
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=20.90 E-value=1e+02 Score=26.69 Aligned_cols=38 Identities=18% Similarity=0.217 Sum_probs=26.6
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
|...+-|.++++.++.| =-.++|+.|.+ +|++|+++.-
T Consensus 1 m~~l~~k~vlVTGas~g---IG~~ia~~l~~-~G~~V~~~~r 38 (246)
T 2ag5_A 1 MGRLDGKVIILTAAAQG---IGQAAALAFAR-EGAKVIATDI 38 (246)
T ss_dssp CCTTTTCEEEESSTTSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCCCCCCEEEEeCCCcH---HHHHHHHHHHH-CCCEEEEEEC
Confidence 54444467777765543 23578999999 9999988763
No 334
>1eyh_A Epsin; superhelix of helices, cell cycle; 1.56A {Rattus norvegicus} SCOP: a.118.9.1 PDB: 1h0a_A* 1edu_A
Probab=20.87 E-value=80 Score=25.26 Aligned_cols=36 Identities=8% Similarity=0.138 Sum_probs=29.2
Q ss_pred ccCHHHHHHHHHHHHcCChhhHHHHHHHHHHHHHHH
Q 043168 403 EVSKENLSAKFELVMNETEKGMDLRKKASEVEMIIK 438 (473)
Q Consensus 403 ~~~~~~l~~ai~~~l~~~~~~~~~~~~a~~~~~~~~ 438 (473)
..+...-++.|..+|.|++..+.-|++|++.+.++.
T Consensus 106 G~~VR~kak~l~~Ll~D~~~L~~eR~~a~~~r~k~~ 141 (144)
T 1eyh_A 106 GVNVREKAKQLVALLRDEDRLREERAHALKTKEKLA 141 (144)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHh
Confidence 345556667788899999888899999999999886
No 335
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=20.84 E-value=1.3e+02 Score=22.86 Aligned_cols=62 Identities=21% Similarity=0.108 Sum_probs=42.0
Q ss_pred cceeeeccChhh---------HHHHHhcCCCEEecccccchhhhHHHHHHHHcceEEEecccCCccCHHHHHHHHHHHHc
Q 043168 348 ISAFLSHCGWNS---------VLEALSHGVPIIGWPLAAEQFYNSKLLEEVIGVCVEVARGMNCEVSKENLSAKFELVMN 418 (473)
Q Consensus 348 ~~~~I~HgG~gs---------~~eal~~GvP~i~~P~~~DQ~~~a~~v~~~lG~G~~l~~~~~~~~~~~~l~~ai~~~l~ 418 (473)
++++|--.|..| +-.|...|+|+|++=.++.+. .-..+++. |..+- .++.+.|.++|+..++
T Consensus 39 ~~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~---a~~iV-----~Wn~~~I~~aI~~~~~ 109 (111)
T 1eiw_A 39 ADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV---SSEVV-----GWNPHCIRDALEDALD 109 (111)
T ss_dssp CSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH---CSEEE-----CSCHHHHHHHHHHHHC
T ss_pred CCEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh---Cceec-----cCCHHHHHHHHHhccC
Confidence 337888889887 567889999999886655441 22224433 32332 3789999999988764
No 336
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=20.78 E-value=86 Score=28.49 Aligned_cols=33 Identities=21% Similarity=0.184 Sum_probs=26.3
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
.+++|.|+..|..|. .+|..|.+ .||+|+++..
T Consensus 29 ~~~~I~iIG~G~mG~-----~~a~~l~~-~g~~V~~~~~ 61 (316)
T 2uyy_A 29 TDKKIGFLGLGLMGS-----GIVSNLLK-MGHTVTVWNR 61 (316)
T ss_dssp CSSCEEEECCSHHHH-----HHHHHHHH-TTCCEEEECS
T ss_pred CCCeEEEEcccHHHH-----HHHHHHHh-CCCEEEEEeC
Confidence 346899998887775 57888999 9999988763
No 337
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=20.72 E-value=57 Score=29.89 Aligned_cols=36 Identities=25% Similarity=0.282 Sum_probs=20.4
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEc
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVN 41 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~ 41 (473)
|+.+.++|+ ++ |+.|-+ -..|+++|.+ +||+|+.+.
T Consensus 1 ~~~~~~~vl-VT-GatGfI--G~~l~~~L~~-~G~~V~~~~ 36 (337)
T 2c29_D 1 MGSQSETVC-VT-GASGFI--GSWLVMRLLE-RGYTVRATV 36 (337)
T ss_dssp -----CEEE-ET-TTTSHH--HHHHHHHHHH-TTCEEEEEE
T ss_pred CCCCCCEEE-EE-CCchHH--HHHHHHHHHH-CCCEEEEEE
Confidence 665555654 44 333332 2468899999 999998765
No 338
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=20.71 E-value=1.2e+02 Score=26.99 Aligned_cols=38 Identities=13% Similarity=0.125 Sum_probs=26.6
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
|...+.|.++++.++.| =-.++|+.|.+ +|++|+++.-
T Consensus 1 m~~l~~k~vlVTGas~g---IG~~ia~~l~~-~G~~V~~~~r 38 (280)
T 1xkq_A 1 MPRFSNKTVIITGSSNG---IGRTTAILFAQ-EGANVTITGR 38 (280)
T ss_dssp -CTTTTCEEEETTCSSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCCCCCCEEEEECCCCh---HHHHHHHHHHH-CCCEEEEEeC
Confidence 44344467788866543 24578999999 9999988763
No 339
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=20.70 E-value=83 Score=28.12 Aligned_cols=37 Identities=11% Similarity=0.073 Sum_probs=31.4
Q ss_pred ceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 6 ENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
+.|.|..-|+-|-.+=...||..|++ +|++|.++=..
T Consensus 3 kvIavs~KGGvGKTT~a~nLA~~La~-~G~rVlliD~D 39 (289)
T 2afh_E 3 RQCAIYGKGGIGKSTTTQNLVAALAE-MGKKVMIVGCD 39 (289)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHH-TTCCEEEEEEC
T ss_pred eEEEEeCCCcCcHHHHHHHHHHHHHH-CCCeEEEEecC
Confidence 36777667899999999999999999 99999888644
No 340
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=20.69 E-value=4.7e+02 Score=23.58 Aligned_cols=62 Identities=18% Similarity=0.171 Sum_probs=37.1
Q ss_pred ccChHHhhcccccceeeeccCh----hhHHHHHhcCCCEEe-ccccc--chhhh-HHHHHHHHcceEEEec
Q 043168 336 WAPQVEILSHKSISAFLSHCGW----NSVLEALSHGVPIIG-WPLAA--EQFYN-SKLLEEVIGVCVEVAR 398 (473)
Q Consensus 336 ~~p~~~lL~~~~~~~~I~HgG~----gs~~eal~~GvP~i~-~P~~~--DQ~~~-a~~v~~~lG~G~~l~~ 398 (473)
|-...++|..+++++++----. -.+.+|+.+|+++++ -|+.. ++..- .+..++. |+-+....
T Consensus 56 ~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~-~~~~~v~~ 125 (329)
T 3evn_A 56 YDKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESC-NLFLMEAQ 125 (329)
T ss_dssp ESCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHT-TCCEEEEC
T ss_pred cCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHc-CCEEEEEE
Confidence 4466788886667677643333 346789999999887 47654 33332 2333434 66555543
No 341
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=20.54 E-value=84 Score=28.61 Aligned_cols=31 Identities=19% Similarity=0.307 Sum_probs=27.4
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEc
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVN 41 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~ 41 (473)
++||.|+..+..|. ++|+.|.+ .||+|++..
T Consensus 3 M~kIgfIGlG~MG~-----~mA~~L~~-~G~~v~v~d 33 (300)
T 3obb_A 3 MKQIAFIGLGHMGA-----PMATNLLK-AGYLLNVFD 33 (300)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHH-TTCEEEEEC
T ss_pred cCEEEEeeehHHHH-----HHHHHHHh-CCCeEEEEc
Confidence 45999999999985 78999999 999999886
No 342
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=20.54 E-value=1.2e+02 Score=27.02 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=25.3
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEc
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVN 41 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~ 41 (473)
+.|+++++.++.| =-.++|+.|.+ +|++|+++.
T Consensus 28 ~~k~~lVTGas~G---IG~aia~~la~-~G~~V~~~~ 60 (280)
T 4da9_A 28 ARPVAIVTGGRRG---IGLGIARALAA-SGFDIAITG 60 (280)
T ss_dssp CCCEEEEETTTSH---HHHHHHHHHHH-TTCEEEEEE
T ss_pred CCCEEEEecCCCH---HHHHHHHHHHH-CCCeEEEEe
Confidence 3477888876553 23578999999 999999886
No 343
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=20.41 E-value=99 Score=26.42 Aligned_cols=37 Identities=14% Similarity=0.082 Sum_probs=29.8
Q ss_pred eEEEEc-CCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 7 NIVMFP-LMAQGHIIPFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 7 ~Il~~~-~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
.|.|.+ -++-|-..=...||..|.+ +|++|.++-...
T Consensus 4 ~i~v~s~kgGvGKTt~a~~LA~~la~-~g~~VlliD~D~ 41 (237)
T 1g3q_A 4 IISIVSGKGGTGKTTVTANLSVALGD-RGRKVLAVDGDL 41 (237)
T ss_dssp EEEEECSSTTSSHHHHHHHHHHHHHH-TTCCEEEEECCT
T ss_pred EEEEecCCCCCCHHHHHHHHHHHHHh-cCCeEEEEeCCC
Confidence 444444 3688999999999999999 999999997553
No 344
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=20.39 E-value=81 Score=28.44 Aligned_cols=32 Identities=19% Similarity=0.284 Sum_probs=27.0
Q ss_pred CceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 5 KENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 5 ~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
++||.|+..+..|. .+|..|.+ .||+|+++..
T Consensus 3 m~~I~iiG~G~mG~-----~~a~~l~~-~G~~V~~~d~ 34 (302)
T 2h78_A 3 MKQIAFIGLGHMGA-----PMATNLLK-AGYLLNVFDL 34 (302)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHH-TTCEEEEECS
T ss_pred CCEEEEEeecHHHH-----HHHHHHHh-CCCeEEEEcC
Confidence 45999999888885 67899999 9999998863
No 345
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.37 E-value=1.7e+02 Score=22.10 Aligned_cols=32 Identities=19% Similarity=0.178 Sum_probs=20.9
Q ss_pred CCeEEEeCCCcc--hHHHHHHH-----hCCcEEEEcccc
Q 043168 117 KPVCIIADMFFA--WSAEIAQE-----YGIFNALFVGGG 148 (473)
Q Consensus 117 ~pDlVI~D~~~~--~~~~~A~~-----~giP~v~~~~~~ 148 (473)
+||+||.|.... .+..+++. ..+|.+.++...
T Consensus 48 ~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~~ 86 (137)
T 3cfy_A 48 KPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAHG 86 (137)
T ss_dssp CCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESSC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEecC
Confidence 899999998665 34444443 257777775443
No 346
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=20.30 E-value=61 Score=30.45 Aligned_cols=33 Identities=15% Similarity=0.118 Sum_probs=26.5
Q ss_pred CCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 4 RKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 4 ~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
++++|.|+..+..|. .+|..|.+ .||+|+++..
T Consensus 21 ~~mkIgiIGlG~mG~-----~~A~~L~~-~G~~V~v~dr 53 (358)
T 4e21_A 21 QSMQIGMIGLGRMGA-----DMVRRLRK-GGHECVVYDL 53 (358)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHHH-TTCEEEEECS
T ss_pred cCCEEEEECchHHHH-----HHHHHHHh-CCCEEEEEeC
Confidence 456999998877664 67999999 9999998863
No 347
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=20.15 E-value=57 Score=27.76 Aligned_cols=37 Identities=27% Similarity=0.276 Sum_probs=24.1
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
|+. +++|++.. +.|.+ -..|++.|.+ +||+|+.++-.
T Consensus 1 M~~-m~~ilItG--atG~i--G~~l~~~L~~-~g~~V~~~~r~ 37 (227)
T 3dhn_A 1 MEK-VKKIVLIG--ASGFV--GSALLNEALN-RGFEVTAVVRH 37 (227)
T ss_dssp --C-CCEEEEET--CCHHH--HHHHHHHHHT-TTCEEEEECSC
T ss_pred CCC-CCEEEEEc--CCchH--HHHHHHHHHH-CCCEEEEEEcC
Confidence 553 35776653 33433 2478999999 99999998843
No 348
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=20.15 E-value=1.2e+02 Score=26.71 Aligned_cols=40 Identities=20% Similarity=0.082 Sum_probs=25.9
Q ss_pred CCCCCceEEEEcCCCc-cCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 1 MAQRKENIVMFPLMAQ-GHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~-GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
|...+-|.++++.++. |-+ -.++|+.|.+ +|++|+++.-.
T Consensus 1 M~~l~~k~vlVTGas~~~gI--G~~~a~~l~~-~G~~V~~~~r~ 41 (275)
T 2pd4_A 1 MGFLKGKKGLIVGVANNKSI--AYGIAQSCFN-QGATLAFTYLN 41 (275)
T ss_dssp -CTTTTCEEEEECCCSTTSH--HHHHHHHHHT-TTCEEEEEESS
T ss_pred CCCCCCCEEEEECCCCCCcH--HHHHHHHHHH-CCCEEEEEeCC
Confidence 5433345666665541 333 3578999999 99999888643
No 349
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=20.13 E-value=59 Score=30.42 Aligned_cols=38 Identities=18% Similarity=0.308 Sum_probs=26.3
Q ss_pred CCceEEEEcCCCcc-C---HHHHHHHHHHHHhCCCcEEEEEcC
Q 043168 4 RKENIVMFPLMAQG-H---IIPFLALALHLENTNRYTITFVNT 42 (473)
Q Consensus 4 ~~~~Il~~~~~~~G-H---v~P~l~LA~~L~~~rGh~Vt~~~~ 42 (473)
+|+||+++..+... | +.....++++|.+ +||+|+.+..
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~-~g~~v~~i~~ 43 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDK-DKYHVDIIYI 43 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCT-TTEEEEEEEE
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhh-cCCEEEEEEE
Confidence 35688888754322 2 2344778999999 9999998863
No 350
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=20.12 E-value=1.2e+02 Score=25.16 Aligned_cols=37 Identities=14% Similarity=0.227 Sum_probs=26.6
Q ss_pred ceEEEEcCCCccCHHHHH-HHHHHHHhCCCcEEEEEcCC
Q 043168 6 ENIVMFPLMAQGHIIPFL-ALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 6 ~~Il~~~~~~~GHv~P~l-~LA~~L~~~rGh~Vt~~~~~ 43 (473)
+||+++-....|+..-+. .+++.|.+ .|++|.++.-.
T Consensus 6 ~kilii~~S~~g~T~~la~~i~~~l~~-~g~~v~~~~l~ 43 (200)
T 2a5l_A 6 PYILVLYYSRHGATAEMARQIARGVEQ-GGFEARVRTVP 43 (200)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHH-TTCEEEEEBCC
T ss_pred ceEEEEEeCCCChHHHHHHHHHHHHhh-CCCEEEEEEhh
Confidence 477666655578776655 45788888 89999887643
No 351
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=20.12 E-value=1.4e+02 Score=29.51 Aligned_cols=41 Identities=24% Similarity=0.316 Sum_probs=29.8
Q ss_pred cCHHHHHHHHHHHHhCCCcEEEEEcCCcchhhhhhcCCCCCCceEEecc
Q 043168 17 GHIIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIP 65 (473)
Q Consensus 17 GHv~P~l~LA~~L~~~rGh~Vt~~~~~~~~~~v~~~~~~~~~~~~~~ip 65 (473)
.+=.-++.+|+.|.+ .|+++. ++..-.+.++. .|+.+..+.
T Consensus 32 ~DK~glv~~Ak~L~~-lGfeI~--ATgGTak~L~e-----~GI~v~~V~ 72 (534)
T 4ehi_A 32 SDKEGIVEFGKELEN-LGFEIL--STGGTFKLLKE-----NGIKVIEVS 72 (534)
T ss_dssp SSCTTHHHHHHHHHH-TTCEEE--ECHHHHHHHHH-----TTCCCEECB
T ss_pred cccccHHHHHHHHHH-CCCEEE--EccHHHHHHHH-----CCCceeehh
Confidence 355668999999999 999875 55666777888 455665554
No 352
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=20.07 E-value=91 Score=28.09 Aligned_cols=39 Identities=13% Similarity=0.218 Sum_probs=30.9
Q ss_pred CceEEEEc--CCCccCHHHHHHHHHHHHhCCCcEEEEEcCCc
Q 043168 5 KENIVMFP--LMAQGHIIPFLALALHLENTNRYTITFVNTPS 44 (473)
Q Consensus 5 ~~~Il~~~--~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~~ 44 (473)
+.|+++++ -|+.|-..=...||..|++ .|.+|.++-...
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~-~G~rVLLID~D~ 131 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQ-TNKRVLLIDCDM 131 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHT-TTCCEEEEECCT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHh-CCCCEEEEeccC
Confidence 34554444 3688999999999999999 999999997554
No 353
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=20.06 E-value=51 Score=32.50 Aligned_cols=37 Identities=8% Similarity=0.109 Sum_probs=27.5
Q ss_pred CCCCCceEEEEcCCCccCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 043168 1 MAQRKENIVMFPLMAQGHIIPFLALALHLENTNRYTITFVNTP 43 (473)
Q Consensus 1 m~~~~~~Il~~~~~~~GHv~P~l~LA~~L~~~rGh~Vt~~~~~ 43 (473)
|+|..+||.|+..|..|. .+|..|.+ .||+|+++-..
T Consensus 1 Msm~~~kVgVIGaG~MG~-----~IA~~la~-aG~~V~l~D~~ 37 (483)
T 3mog_A 1 MSLNVQTVAVIGSGTMGA-----GIAEVAAS-HGHQVLLYDIS 37 (483)
T ss_dssp ---CCCCEEEECCSHHHH-----HHHHHHHH-TTCCEEEECSC
T ss_pred CCCCCCEEEEECcCHHHH-----HHHHHHHH-CCCeEEEEECC
Confidence 555566999998777775 68899999 99999988643
No 354
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=20.06 E-value=1e+02 Score=27.20 Aligned_cols=36 Identities=14% Similarity=0.141 Sum_probs=28.6
Q ss_pred CceEEEEcC--CCccCHHHHHHHHHHHHhCCCcEEEEEc
Q 043168 5 KENIVMFPL--MAQGHIIPFLALALHLENTNRYTITFVN 41 (473)
Q Consensus 5 ~~~Il~~~~--~~~GHv~P~l~LA~~L~~~rGh~Vt~~~ 41 (473)
+++.+|++. ..-|-..-.+.|++.|++ +|++|.++=
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~-~G~~V~~fK 62 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQ-AGIDVAVCK 62 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHH-TTCCEEEEE
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHH-CCCeEEEEe
Confidence 445555443 478889999999999999 999999985
Done!