Your job contains 1 sequence.
>043169
MPSLEEELFPSTPGKFKIERSNTMNRQFHRCFTSTSTMFLWALFLVALTASYLSFQSFVD
SGSRYFSASWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGL
DNFNNYYDPSLKKARKALLNNHGVFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRY
AMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPAS
LYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYR
GKNHVDLARDFTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKV
KAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYYGYNRGKRV
N
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043169
(421 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2118711 - symbol:GAE1 "UDP-D-glucuronate 4-epi... 1929 2.9e-199 1
TAIR|locus:2025472 - symbol:GAE2 "UDP-D-glucuronate 4-epi... 1476 2.9e-151 1
TAIR|locus:2126846 - symbol:GAE3 "UDP-D-glucuronate 4-epi... 1464 5.4e-150 1
TAIR|locus:2050921 - symbol:GAE4 "UDP-D-glucuronate 4-epi... 1458 2.3e-149 1
TAIR|locus:2139134 - symbol:GAE5 "UDP-D-glucuronate 4-epi... 1401 2.6e-143 1
TAIR|locus:2076066 - symbol:GAE6 "UDP-D-glucuronate 4-epi... 1324 3.7e-135 1
TIGR_CMR|CBU_0844 - symbol:CBU_0844 "capsular polysacchar... 828 1.3e-82 1
UNIPROTKB|Q8E8H8 - symbol:wcvA "UDP-glucuronate 4-epimera... 793 6.8e-79 1
TIGR_CMR|SO_4686 - symbol:SO_4686 "NAD dependent epimeras... 793 6.8e-79 1
TIGR_CMR|GSU_2241 - symbol:GSU_2241 "capsular polysacchar... 791 1.1e-78 1
UNIPROTKB|Q489C2 - symbol:CPS_0592 "Capsular polysacchari... 717 7.7e-71 1
TIGR_CMR|CPS_0592 - symbol:CPS_0592 "capsular polysacchar... 717 7.7e-71 1
UNIPROTKB|Q0BYW6 - symbol:HNE_2639 "UDP-glucuronate 5'-ep... 693 2.7e-68 1
UNIPROTKB|Q8ECF3 - symbol:wbpP "UDP-GlkcNAc C4 epimerase ... 327 1.6e-29 1
TIGR_CMR|SO_3189 - symbol:SO_3189 "polysaccharide biosynt... 327 1.6e-29 1
UNIPROTKB|Q6MWV3 - symbol:galE1 "UDP-glucose 4-epimerase"... 320 9.1e-29 1
UNIPROTKB|Q47Y09 - symbol:CPS_3643 "NAD-dependent epimera... 310 1.0e-27 1
TIGR_CMR|CPS_3643 - symbol:CPS_3643 "NAD-dependent epimer... 310 1.0e-27 1
TIGR_CMR|CBU_0677 - symbol:CBU_0677 "NAD dependent epimer... 305 3.5e-27 1
TIGR_CMR|CHY_0545 - symbol:CHY_0545 "UDP-glucose 4-epimer... 285 4.7e-25 1
TAIR|locus:2138121 - symbol:UGE2 "UDP-D-glucose/UDP-D-gal... 282 1.1e-24 1
UNIPROTKB|Q14376 - symbol:GALE "UDP-glucose 4-epimerase" ... 275 7.7e-24 1
TIGR_CMR|CBU_0829 - symbol:CBU_0829 "NAD dependent epimer... 274 1.0e-23 1
TIGR_CMR|CJE_1513 - symbol:CJE_1513 "NAD-dependent epimer... 271 2.2e-23 1
UNIPROTKB|I3LL84 - symbol:GALE "Uncharacterized protein" ... 268 5.0e-23 1
TIGR_CMR|BA_0507 - symbol:BA_0507 "NAD-dependent epimeras... 264 1.5e-22 1
TAIR|locus:2123466 - symbol:UGE5 "UDP-D-glucose/UDP-D-gal... 264 1.5e-22 1
UNIPROTKB|F1PI88 - symbol:GALE "Uncharacterized protein" ... 263 1.9e-22 1
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 263 1.9e-22 1
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 263 1.9e-22 1
UNIPROTKB|Q3T105 - symbol:GALE "Uncharacterized protein" ... 260 4.2e-22 1
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 265 5.6e-22 1
UNIPROTKB|P09147 - symbol:galE species:83333 "Escherichia... 258 7.2e-22 1
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 260 8.4e-22 1
UNIPROTKB|Q6A1A4 - symbol:galE "UDP-galactose 4-epimerase... 256 1.2e-21 1
TAIR|locus:2204639 - symbol:MUR4 "MURUS 4" species:3702 "... 270 1.6e-21 1
UNIPROTKB|P0C7J0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 257 1.9e-21 1
TIGR_CMR|SO_3167 - symbol:SO_3167 "dTDP-glucose 4,6-dehyd... 253 2.7e-21 1
UNIPROTKB|O06329 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 252 3.5e-21 1
TIGR_CMR|BA_1230 - symbol:BA_1230 "dTDP-glucose 4,6-dehyd... 252 3.5e-21 1
TIGR_CMR|DET_0204 - symbol:DET_0204 "NAD-dependent epimer... 252 3.5e-21 1
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 258 3.6e-21 1
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 258 3.6e-21 1
TIGR_CMR|CJE_1287 - symbol:CJE_1287 "ADP-L-glycero-D-mann... 251 4.5e-21 1
UNIPROTKB|B0RVL0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 255 7.9e-21 1
UNIPROTKB|P44914 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 248 9.8e-21 1
TAIR|locus:2099372 - symbol:RHM3 "rhamnose biosynthesis 3... 269 1.2e-20 1
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 247 1.3e-20 1
TIGR_CMR|GSU_2366 - symbol:GSU_2366 "dTDP-glucose 4,6-deh... 255 1.9e-20 1
UNIPROTKB|P29782 - symbol:strE "dTDP-glucose 4,6-dehydrat... 244 2.8e-20 1
UNIPROTKB|E2QWQ8 - symbol:TGDS "Uncharacterized protein" ... 252 4.5e-20 1
UNIPROTKB|F1NWE5 - symbol:GALE "Uncharacterized protein" ... 250 7.0e-20 1
TAIR|locus:2163401 - symbol:DUR "DEFECTIVE UGE IN ROOT" s... 255 1.4e-19 1
TIGR_CMR|GSU_1815 - symbol:GSU_1815 "NAD-dependent epimer... 234 3.6e-19 1
ZFIN|ZDB-GENE-030131-5718 - symbol:tgds "TDP-glucose 4,6-... 243 6.1e-19 1
UNIPROTKB|Q9KLH0 - symbol:VC_A0774 "UDP-glucose 4-epimera... 241 6.6e-19 1
TIGR_CMR|VC_A0774 - symbol:VC_A0774 "UDP-glucose 4-epimer... 241 6.6e-19 1
TAIR|locus:2014235 - symbol:RHD1 "ROOT HAIR DEFECTIVE 1" ... 242 8.8e-19 1
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 252 1.1e-18 1
TIGR_CMR|GSU_1975 - symbol:GSU_1975 "NAD-dependent epimer... 239 1.2e-18 1
UNIPROTKB|A0QSK6 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 237 1.5e-18 1
TAIR|locus:2202960 - symbol:RHM1 "rhamnose biosynthesis 1... 249 2.5e-18 1
ZFIN|ZDB-GENE-060421-6479 - symbol:gale "UDP-galactose-4-... 237 4.7e-18 1
UNIPROTKB|P37777 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 152 1.0e-17 2
UNIPROTKB|Q9S642 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 233 1.2e-17 1
UNIPROTKB|P27830 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 234 1.3e-17 1
RGD|621493 - symbol:Gale "UDP-galactose-4-epimerase" spec... 177 1.5e-17 2
UNIPROTKB|P26391 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 148 1.9e-17 2
WB|WBGene00005019 - symbol:sqv-1 species:6239 "Caenorhabd... 238 1.9e-17 1
UNIPROTKB|Q9ZAE8 - symbol:acbB "dTDP-glucose 4,6-dehydrat... 227 2.6e-17 1
UNIPROTKB|Q0C421 - symbol:HNE_0794 "Putative GDP-6-deoxy-... 227 3.5e-17 1
TAIR|locus:2081675 - symbol:AUD1 "AT3G62830" species:3702... 234 4.6e-17 1
UNIPROTKB|P55294 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 229 5.8e-17 1
UNIPROTKB|P37759 - symbol:rfbB "RmlB" species:83333 "Esch... 143 7.1e-17 2
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 228 9.0e-17 1
DICTYBASE|DDB_G0279465 - symbol:tgds "putative dTDP-D-glu... 225 1.3e-16 2
TAIR|locus:2053275 - symbol:UXS6 "UDP-XYL synthase 6" spe... 224 1.9e-16 1
UNIPROTKB|Q8NBZ7 - symbol:UXS1 "UDP-glucuronic acid decar... 228 1.9e-16 1
MGI|MGI:1915133 - symbol:Uxs1 "UDP-glucuronate decarboxyl... 228 1.9e-16 1
RGD|628680 - symbol:Uxs1 "UDP-glucuronate decarboxylase 1... 228 1.9e-16 1
UNIPROTKB|Q5PQX0 - symbol:Uxs1 "UDP-glucuronic acid decar... 228 1.9e-16 1
TIGR_CMR|BA_5700 - symbol:BA_5700 "UDP-glucose 4-epimeras... 223 2.1e-16 1
TIGR_CMR|BA_5505 - symbol:BA_5505 "UDP-glucose 4-epimeras... 222 2.3e-16 1
UNIPROTKB|E1BMI4 - symbol:UXS1 "Uncharacterized protein" ... 226 3.2e-16 1
UNIPROTKB|F1SU22 - symbol:UXS1 "Uncharacterized protein" ... 225 3.4e-16 1
UNIPROTKB|P37761 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 222 3.6e-16 1
TIGR_CMR|SO_1664 - symbol:SO_1664 "UDP-glucose 4-epimeras... 221 3.8e-16 1
UNIPROTKB|P55293 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 145 5.8e-16 2
TAIR|locus:2010371 - symbol:UGE1 "UDP-D-glucose/UDP-D-gal... 220 6.8e-16 1
UNIPROTKB|F1PU61 - symbol:UXS1 "Uncharacterized protein" ... 222 9.0e-16 1
UNIPROTKB|E1BV28 - symbol:UXS1 "Uncharacterized protein" ... 222 9.5e-16 1
TIGR_CMR|GSU_2240 - symbol:GSU_2240 "UDP-glucose 4-epimer... 216 1.2e-15 1
UNIPROTKB|Q5QPP1 - symbol:GALE "UDP-glucose 4-epimerase" ... 202 1.3e-15 1
UNIPROTKB|Q5QPP2 - symbol:GALE "UDP-glucose 4-epimerase" ... 202 1.3e-15 1
TAIR|locus:2168539 - symbol:UXS3 "UDP-glucuronic acid dec... 215 3.1e-15 1
ZFIN|ZDB-GENE-020419-37 - symbol:uxs1 "UDP-glucuronic aci... 216 4.6e-15 1
TAIR|locus:2015253 - symbol:UGE3 "UDP-D-glucose/UDP-D-gal... 212 6.4e-15 1
TAIR|locus:2078206 - symbol:UXS5 "UDP-XYL synthase 5" spe... 208 1.6e-14 1
FB|FBgn0035848 - symbol:CG7979 species:7227 "Drosophila m... 210 2.6e-14 1
UNIPROTKB|P95780 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 206 3.1e-14 1
WARNING: Descriptions of 118 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2118711 [details] [associations]
symbol:GAE1 "UDP-D-glucuronate 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161577 EMBL:AY661562 EMBL:AY056303
EMBL:AY099855 EMBL:BT000308 EMBL:AY085505 IPI:IPI00530645
PIR:A85356 RefSeq:NP_194773.1 UniGene:At.20969 UniGene:At.67043
HSSP:P04397 ProteinModelPortal:Q9M0B6 SMR:Q9M0B6 STRING:Q9M0B6
PaxDb:Q9M0B6 PRIDE:Q9M0B6 EnsemblPlants:AT4G30440.1 GeneID:829167
KEGG:ath:AT4G30440 TAIR:At4g30440 HOGENOM:HOG000168000
InParanoid:Q9M0B6 KO:K08679 OMA:DELMSET PhylomeDB:Q9M0B6
ProtClustDB:CLSN2679288 Genevestigator:Q9M0B6 GO:GO:0050378
Uniprot:Q9M0B6
Length = 429
Score = 1929 (684.1 bits), Expect = 2.9e-199, P = 2.9e-199
Identities = 364/432 (84%), Positives = 398/432 (92%)
Query: 1 MPSLEEELFPSTPGKFKIERSNTMNRQFHRCFTSTSTMFLWALFLVALTASYLSFQSFVD 60
MPS+E+ELFPSTPGKFKI+RSN RQ HRCF STSTMFLWALFL+ALTASYLSFQSFVD
Sbjct: 1 MPSIEDELFPSTPGKFKIDRSN---RQLHRCFASTSTMFLWALFLIALTASYLSFQSFVD 57
Query: 61 SGSRYFSASWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGL 120
SGSRY +ASWGGIQWEK VR+SAQIHRSGG+SVLVTGA GFVG+HVSLAL+KRGDGVVGL
Sbjct: 58 SGSRYLTASWGGIQWEKQVRTSAQIHRSGGISVLVTGATGFVGSHVSLALRKRGDGVVGL 117
Query: 121 DNFNNYYDPSLKKARKALLNNHGVFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRY 180
DNFNNYYDPSLK+AR++LL++ G+FV+EGD+NDAKLLAKLFD VAFTHVMHLAAQAGVRY
Sbjct: 118 DNFNNYYDPSLKRARRSLLSSRGIFVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRY 177
Query: 181 AMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPAS 240
A++NP SYVHSNIAGLV LLE CK+ANPQP+IVWASSSSVYGLNE VPFSE+DRTDQPAS
Sbjct: 178 ALENPQSYVHSNIAGLVNLLEICKAANPQPAIVWASSSSVYGLNEKVPFSESDRTDQPAS 237
Query: 241 LYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYR 300
LYAATKKAGEEI HTYNHIYGL+ITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPIT+YR
Sbjct: 238 LYAATKKAGEEITHTYNHIYGLAITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITIYR 297
Query: 301 GKNHVDLARDFTYIDDIVKGCLGSLDTSA----------GPAPYRIFNLGNTSPVTVPKL 350
GKN VDLARDFTYIDDIVKGCLGSLD+S G APYRIFNLGNTSPVTVP L
Sbjct: 298 GKNRVDLARDFTYIDDIVKGCLGSLDSSGKSTGSGGKKRGAAPYRIFNLGNTSPVTVPIL 357
Query: 351 VNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLS 410
V+ILE+HLKVKAK+N +EMPGNGDVPFTHANISSA+ EFGY+PTTDL+TGLKKFVRWYLS
Sbjct: 358 VDILEKHLKVKAKRNFVEMPGNGDVPFTHANISSARNEFGYKPTTDLETGLKKFVRWYLS 417
Query: 411 YYGYN-RGKRVN 421
YYGYN + K V+
Sbjct: 418 YYGYNTKAKLVH 429
>TAIR|locus:2025472 [details] [associations]
symbol:GAE2 "UDP-D-glucuronate 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC020622 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AF334734 EMBL:AY084754
EMBL:AK228396 IPI:IPI00543208 PIR:A86152 RefSeq:NP_171702.1
UniGene:At.17005 ProteinModelPortal:Q9LPC1 SMR:Q9LPC1 STRING:Q9LPC1
PaxDb:Q9LPC1 PRIDE:Q9LPC1 EnsemblPlants:AT1G02000.1 GeneID:839289
KEGG:ath:AT1G02000 TAIR:At1g02000 InParanoid:Q9LPC1 OMA:LFKFVDA
PhylomeDB:Q9LPC1 Genevestigator:Q9LPC1 Uniprot:Q9LPC1
Length = 434
Score = 1476 (524.6 bits), Expect = 2.9e-151, P = 2.9e-151
Identities = 293/424 (69%), Positives = 333/424 (78%)
Query: 10 PSTPGKFKIERSNTMNRQFHRCFTSTSTMFLWALFLVALTAS--YLSFQSFVDSGSRYFS 67
PSTPGKFK+ + R +S + + W+L L Y S S DS R
Sbjct: 8 PSTPGKFKMMDKSPFFLHRTRWQSSVAKLAFWSLVFFGLLFIFFYRSPISNPDSSRRSLR 67
Query: 68 A-SWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNY 126
SWGG WEK VRSSA++ G+SVLVTGAAGFVGTHVS ALK+RGDGV+GLDNFN+Y
Sbjct: 68 TYSWGGPAWEKRVRSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDY 127
Query: 127 YDPSLKKARKALLNNHGVFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPH 186
YD SLK++R+ALL GVF++EGDIND LL KLF+ V FTHVMHLAAQAGVRYAM+NP
Sbjct: 128 YDTSLKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPG 187
Query: 187 SYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATK 246
SYVHSNIAG V LLE CKSANPQP+IVWASSSSVYGLN VPFSE DRTDQPASLYAATK
Sbjct: 188 SYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATK 247
Query: 247 KAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVD 306
KAGEEIAHTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FTR+IL+GK I+++ G NH
Sbjct: 248 KAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEGANHGT 307
Query: 307 LARDFTYIDDIVKGCLGSLDTSA----------GPAPYRIFNLGNTSPVTVPKLVNILER 356
+ARDFTYIDDIVKGCLG+LDT+ G A R+FNLGNTSPV V LV+ILER
Sbjct: 308 VARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVSILER 367
Query: 357 HLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYYGYNR 416
LKVKAK+N++++P NGDVPFTHANISSAQ+EFGY+P+TDLQTGLKKFVRWYL YY
Sbjct: 368 LLKVKAKRNMMKLPRNGDVPFTHANISSAQREFGYKPSTDLQTGLKKFVRWYLGYYKQG- 426
Query: 417 GKRV 420
GK+V
Sbjct: 427 GKKV 430
>TAIR|locus:2126846 [details] [associations]
symbol:GAE3 "UDP-D-glucuronate 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0016020 "membrane" evidence=TAS] [GO:0050378
"UDP-glucuronate 4-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
GO:GO:0032580 GO:GO:0044237 EMBL:AL161471 EMBL:AF069299
HOGENOM:HOG000168000 KO:K08679 ProtClustDB:CLSN2679288
GO:GO:0050378 EMBL:BT026487 IPI:IPI00527699 PIR:T01339
RefSeq:NP_191922.1 UniGene:At.27610 HSSP:Q14376
ProteinModelPortal:O81312 SMR:O81312 STRING:O81312 PaxDb:O81312
PRIDE:O81312 EnsemblPlants:AT4G00110.1 GeneID:828145
KEGG:ath:AT4G00110 TAIR:At4g00110 InParanoid:O81312 OMA:KWWSRVL
PhylomeDB:O81312 Genevestigator:O81312 Uniprot:O81312
Length = 430
Score = 1464 (520.4 bits), Expect = 5.4e-150, P = 5.4e-150
Identities = 297/428 (69%), Positives = 334/428 (78%)
Query: 10 PSTPGKFKIERSNTMNRQFHRCF--TSTSTMFLWALFLVALTASYLSFQSFVDSG----S 63
PSTPGKFK FHR +S + + W+L V L + ++S V S S
Sbjct: 11 PSTPGKFK--------PYFHRTRWQSSVAKLAFWSLVFVGLIFIFF-YRSPVSSNPADPS 61
Query: 64 RYF--SASWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLD 121
R + SWGG WEK VRSSA++ G SVLVTGAAGFVGTHVS ALK+RGDGV+GLD
Sbjct: 62 RRSLRTYSWGGPAWEKRVRSSARLRTRRGFSVLVTGAAGFVGTHVSAALKRRGDGVLGLD 121
Query: 122 NFNNYYDPSLKKARKALLNNHGVFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYA 181
NFN+YYDPSLK+AR+ALL GVFV+EGDINDA LL KLF+ V FTHVMHLAAQAGVRYA
Sbjct: 122 NFNDYYDPSLKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFTHVMHLAAQAGVRYA 181
Query: 182 MQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASL 241
M+NP SYVHSNIAG V LLE CKSANPQP+IVWASSSSVYGLN VPFSE DRTDQPASL
Sbjct: 182 MENPSSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASL 241
Query: 242 YAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRG 301
YAATKKAGEEIAHTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FTR+IL+GK I+++ G
Sbjct: 242 YAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEG 301
Query: 302 KNHVDLARDFTYIDDIVKGCLGSLDTSA----------GPAPYRIFNLGNTSPVTVPKLV 351
NH +ARDFTYIDDIVKGCLG+LDT+ G A R+FNLGNTSPV V LV
Sbjct: 302 VNHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLV 361
Query: 352 NILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSY 411
ILER LKVKAK+N++++P NGDV FTHANISSAQ+E GY+PTTDLQTGLKKF RWYL Y
Sbjct: 362 TILERLLKVKAKRNIMKLPRNGDVQFTHANISSAQRELGYKPTTDLQTGLKKFARWYLGY 421
Query: 412 YGYNRGKR 419
Y N GK+
Sbjct: 422 Y--NGGKK 427
>TAIR|locus:2050921 [details] [associations]
symbol:GAE4 "UDP-D-glucuronate 4-epimerase 4"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC002387 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376 EMBL:AY594693
EMBL:BT005652 EMBL:BT004225 IPI:IPI00535089 PIR:A84889
RefSeq:NP_182056.1 UniGene:At.66419 ProteinModelPortal:O22141
SMR:O22141 STRING:O22141 PaxDb:O22141 PRIDE:O22141
EnsemblPlants:AT2G45310.1 GeneID:819139 KEGG:ath:AT2G45310
TAIR:At2g45310 InParanoid:O22141 OMA:IFESANH PhylomeDB:O22141
BioCyc:MetaCyc:AT2G45310-MONOMER Genevestigator:O22141
Uniprot:O22141
Length = 437
Score = 1458 (518.3 bits), Expect = 2.3e-149, P = 2.3e-149
Identities = 287/421 (68%), Positives = 335/421 (79%)
Query: 10 PSTPGKFKIERSNTMNR-QFHRCFTSTSTMFLWALFLVAL----TASYLSFQSFVDSGSR 64
PS+PGKFK+E+S+ ++R +F T + + L L++L + ++ S D R
Sbjct: 8 PSSPGKFKMEKSSYLHRLRFQSSLTKFAFFSFFLLCLISLLFLRSPPSINPSSPSDPSRR 67
Query: 65 YFSAS-WGGIQWEKHVRSSAQIHRS--GGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLD 121
+ +GG WEK +RSSA+I S G++VLVTGAAGFVGTHVS ALK+RGDGV+GLD
Sbjct: 68 SLRTNTYGGPAWEKRLRSSARIRTSTNNGITVLVTGAAGFVGTHVSAALKRRGDGVIGLD 127
Query: 122 NFNNYYDPSLKKARKALLNNHGVFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYA 181
NFN+YYDPSLK+AR+ALL G+F++EGDIND +LL KLF V+FTHVMHLAAQAGVRYA
Sbjct: 128 NFNDYYDPSLKRARRALLERSGIFIVEGDINDVELLRKLFKIVSFTHVMHLAAQAGVRYA 187
Query: 182 MQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASL 241
M+NP SYVHSNIAG V LLE CKS NPQP+IVWASSSSVYGLN VPFSE D+TDQPASL
Sbjct: 188 MENPSSYVHSNIAGFVNLLEICKSVNPQPAIVWASSSSVYGLNTKVPFSEKDKTDQPASL 247
Query: 242 YAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRG 301
YAATKKAGEEIAHTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FT++IL+GK I+++
Sbjct: 248 YAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKSISIFES 307
Query: 302 KNHVDLARDFTYIDDIVKGCLGSLDTSA----------GPAPYRIFNLGNTSPVTVPKLV 351
NH +ARDFTYIDDIVKGCL +LDT+ GPA R+FNLGNTSPV V LV
Sbjct: 308 ANHGTVARDFTYIDDIVKGCLAALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLV 367
Query: 352 NILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSY 411
ILER LKVKAKKN+I+MP NGDVPFTHANIS AQ+E GY+PTTDLQTGLKKFVRWYLSY
Sbjct: 368 RILERQLKVKAKKNLIKMPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLSY 427
Query: 412 Y 412
Y
Sbjct: 428 Y 428
>TAIR|locus:2139134 [details] [associations]
symbol:GAE5 "UDP-D-glucuronate 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0016036 "cellular response to phosphate
starvation" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] [GO:0042631 "cellular response to water
deprivation" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161533 EMBL:AL080318 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376
EMBL:AY050993 EMBL:AY150403 IPI:IPI00529597 PIR:T48135
RefSeq:NP_192962.1 UniGene:At.48849 UniGene:At.66589
ProteinModelPortal:Q9STI6 SMR:Q9STI6 STRING:Q9STI6 PRIDE:Q9STI6
EnsemblPlants:AT4G12250.1 GeneID:826833 KEGG:ath:AT4G12250
TAIR:At4g12250 InParanoid:Q9STI6 OMA:RAYRQQM PhylomeDB:Q9STI6
Genevestigator:Q9STI6 Uniprot:Q9STI6
Length = 436
Score = 1401 (498.2 bits), Expect = 2.6e-143, P = 2.6e-143
Identities = 278/427 (65%), Positives = 325/427 (76%)
Query: 10 PSTPGKFKIERSNTMNRQFHRCFTSTSTMFLWALFLVALTASYL--------SFQSFVDS 61
PSTPGK+K ++ H + S + LWA +AL YL S ++ DS
Sbjct: 8 PSTPGKYKTDKVPPYGILHHHRYLRLSKLTLWASLFLALFLFYLVLSPPPSPSRRNLNDS 67
Query: 62 GSRYFSASWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLD 121
S +A +GG WEK VR SA+ GG++VLVTGA+GFVGTHVS+AL++RGDGV+GLD
Sbjct: 68 SS-ISAAKYGGSHWEKQVRKSARPRSHGGLTVLVTGASGFVGTHVSIALRRRGDGVLGLD 126
Query: 122 NFNNYYDPSLKKARKALLNNHGVFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYA 181
NFN YYDP LK+AR+ LL GVFV+EGDINDA LL KLFD V FTHVMHLAAQAGVRYA
Sbjct: 127 NFNRYYDPKLKRARQGLLERSGVFVVEGDINDAVLLRKLFDVVLFTHVMHLAAQAGVRYA 186
Query: 182 MQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASL 241
MQNP SYV+SNIAG V LLE KSANPQP+IVWASSSSVYGLN VPFSE DRTDQPASL
Sbjct: 187 MQNPGSYVNSNIAGFVNLLEVSKSANPQPAIVWASSSSVYGLNSKVPFSEKDRTDQPASL 246
Query: 242 YAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRG 301
YAATKKAGE IAHTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FT++IL+GK ITV+
Sbjct: 247 YAATKKAGEGIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKTITVFES 306
Query: 302 KNHVDLARDFTYIDDIVKGCLGSLDTSA----------GPAPYRIFNLGNTSPVTVPKLV 351
+ +ARDFTYIDDIVKGCLG+LDT+ GPA +RI+NLGNTSPV V KLV
Sbjct: 307 PDKGSVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKKGPAMFRIYNLGNTSPVPVTKLV 366
Query: 352 NILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSY 411
ILE+ LK+KAKK ++ +P NGDV FTHANI+ AQ E GY+P DL+TGLKKFV+WY+ +
Sbjct: 367 TILEKLLKMKAKKKIMPLPRNGDVEFTHANITLAQAELGYKPAVDLETGLKKFVKWYMGF 426
Query: 412 YGYNRGK 418
Y ++ K
Sbjct: 427 YTGSKKK 433
>TAIR|locus:2076066 [details] [associations]
symbol:GAE6 "UDP-D-glucuronate 4-epimerase 6"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006569 "tryptophan catabolic process" evidence=RCA]
[GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AP001297 HSSP:P04397 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AJ879893
EMBL:AF083691 EMBL:AF370210 EMBL:AY056117 EMBL:AY062625
EMBL:AY133771 IPI:IPI00538638 RefSeq:NP_189024.1 UniGene:At.24934
UniGene:At.67131 UniGene:At.71799 ProteinModelPortal:Q9LIS3
SMR:Q9LIS3 IntAct:Q9LIS3 STRING:Q9LIS3 PaxDb:Q9LIS3 PRIDE:Q9LIS3
EnsemblPlants:AT3G23820.1 GeneID:821965 KEGG:ath:AT3G23820
TAIR:At3g23820 InParanoid:Q9LIS3 OMA:NTAMPFS PhylomeDB:Q9LIS3
BRENDA:5.1.3.6 Genevestigator:Q9LIS3 Uniprot:Q9LIS3
Length = 460
Score = 1324 (471.1 bits), Expect = 3.7e-135, P = 3.7e-135
Identities = 255/380 (67%), Positives = 303/380 (79%)
Query: 47 ALTASYLSFQSFVDSG---SRYFSASWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVG 103
A A +L +SF+ +G S S+S GG WEK VR S+ R G+SVLVTGAAGFVG
Sbjct: 65 AAAAHHLHRRSFLSTGLFSSSSSSSSIGGAAWEKRVRQSSTAKRPHGLSVLVTGAAGFVG 124
Query: 104 THVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDINDAKLLAKLFDA 163
+H SLAL+KRGDGV+G DNFN+YYDPSLK+AR+ LL VF++EGD+ND LL KLFD
Sbjct: 125 SHCSLALRKRGDGVLGFDNFNDYYDPSLKRARQELLEKQQVFIVEGDLNDGPLLRKLFDV 184
Query: 164 VAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGL 223
V FTH++HLAAQAGVRYAM+NP SY+ SNIAG V LLE K+ANPQP+IVWASSSSVYGL
Sbjct: 185 VPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQPAIVWASSSSVYGL 244
Query: 224 NENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAY 283
N PFSE RTDQPASLYAATKKAGEEIAHTYNHIYGLS+TGLRFFTVYGPWGRPDMAY
Sbjct: 245 NTENPFSEEHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAY 304
Query: 284 FSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTSA----------GPAP 333
F FT++IL GK I +YR +++ ++ARDFTYIDDIVKGC+G+LDT+ G A
Sbjct: 305 FFFTKDILHGKSIDIYRTQDNQEVARDFTYIDDIVKGCVGALDTAEKSTGSGGKKRGQAQ 364
Query: 334 YRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRP 393
R++NLGNTSPV V +LV+ILE L KAKK++I+MP NGDVP+THAN+S A K+FGY+P
Sbjct: 365 LRVYNLGNTSPVPVGRLVSILEGLLGTKAKKHLIKMPRNGDVPYTHANVSLAYKDFGYKP 424
Query: 394 TTDLQTGLKKFVRWYLSYYG 413
TTDL GL+KFV+WY+ YYG
Sbjct: 425 TTDLAAGLRKFVKWYVGYYG 444
>TIGR_CMR|CBU_0844 [details] [associations]
symbol:CBU_0844 "capsular polysaccharide biosynthesis
protein I" species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 HOGENOM:HOG000168000
KO:K08679 OMA:NSAYSAN RefSeq:NP_819864.2 ProteinModelPortal:Q83D94
GeneID:1208737 KEGG:cbu:CBU_0844 PATRIC:17930385
ProtClustDB:CLSK914357 BioCyc:CBUR227377:GJ7S-839-MONOMER
GO:GO:0003974 Uniprot:Q83D94
Length = 339
Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
Identities = 171/338 (50%), Positives = 222/338 (65%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG- 149
M LVTG AGF+G H++ L RGD ++GLDN N+YYD +LK+AR A L F
Sbjct: 6 MRTLVTGCAGFIGFHLTKRLLARGDHILGLDNLNDYYDVNLKEARLAQLKEFPHFSFHKL 65
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
D+ D + + LF F V+HLAAQAGVRY++ NP++YV SN+ G +LE C+ + +
Sbjct: 66 DLADRQGMTDLFQKHLFDTVVHLAAQAGVRYSLTNPYAYVDSNLVGFAHILEGCRHQSVK 125
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRF 269
+V+ASSSSVYG NE PFSE+D D P +LYAA+KKA E +AH+Y H++ L TGLRF
Sbjct: 126 -HLVFASSSSVYGANEKYPFSESDNVDHPIALYAASKKANELMAHSYAHLFQLPCTGLRF 184
Query: 270 FTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTSA 329
FTVYGPWGRPDMA F FTRN+L KPI VY NH ++RDFTYIDDIV G L +LD
Sbjct: 185 FTVYGPWGRPDMALFKFTRNLLADKPIDVY---NHGKMSRDFTYIDDIVDGILLTLDHPP 241
Query: 330 GP---------------APYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGD 374
P APYRI+N+G+ +P+ + + ILE+ L KA KN + + GD
Sbjct: 242 EPNSAYSANQPNPAKSNAPYRIYNIGSNNPILLTNFIAILEKTLNKKAIKNFLPLQP-GD 300
Query: 375 VPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYY 412
VP T+A++S +K+F YRP T LQ G+K FV WYL Y+
Sbjct: 301 VPETYADVSQLEKDFQYRPRTPLQKGVKNFVEWYLQYF 338
>UNIPROTKB|Q8E8H8 [details] [associations]
symbol:wcvA "UDP-glucuronate 4-epimerase WcvA"
species:211586 "Shewanella oneidensis MR-1" [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 172/338 (50%), Positives = 216/338 (63%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVF-VIEG 149
M LVTGAAGF+G +VS L G VVG+DN N+YYD +LK AR A L F I+
Sbjct: 1 MKYLVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKL 60
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
D+ D + +AKLF F V+HLAAQAGVRY++ NP +Y SN+ G +T+LE C+ +
Sbjct: 61 DLADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIE 120
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRF 269
+V+ASSSSVYGLN+ +PFS D D P SLYAATKKA E ++HTY+H+Y L TGLRF
Sbjct: 121 -HLVYASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPTTGLRF 179
Query: 270 FTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTSA 329
FTVYGPWGRPDMA F FT+ IL G+ I VY NH DL+RDFTYIDDIV+G + D
Sbjct: 180 FTVYGPWGRPDMALFKFTKAILAGETIDVY---NHGDLSRDFTYIDDIVEGIIRVQDKPP 236
Query: 330 GP---------------APYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGD 374
P APYR+FN+GN SPV + + LER L ++AKK + M GD
Sbjct: 237 SPTPDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALGIEAKKQFLPMQP-GD 295
Query: 375 VPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYY 412
V T A+ K GY+ D+ TG+ KFV WY ++Y
Sbjct: 296 VHATWADTEDLFKAVGYKSQVDIDTGVAKFVDWYRNFY 333
>TIGR_CMR|SO_4686 [details] [associations]
symbol:SO_4686 "NAD dependent epimerase/dehydratase family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 172/338 (50%), Positives = 216/338 (63%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVF-VIEG 149
M LVTGAAGF+G +VS L G VVG+DN N+YYD +LK AR A L F I+
Sbjct: 1 MKYLVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKL 60
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
D+ D + +AKLF F V+HLAAQAGVRY++ NP +Y SN+ G +T+LE C+ +
Sbjct: 61 DLADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIE 120
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRF 269
+V+ASSSSVYGLN+ +PFS D D P SLYAATKKA E ++HTY+H+Y L TGLRF
Sbjct: 121 -HLVYASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPTTGLRF 179
Query: 270 FTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTSA 329
FTVYGPWGRPDMA F FT+ IL G+ I VY NH DL+RDFTYIDDIV+G + D
Sbjct: 180 FTVYGPWGRPDMALFKFTKAILAGETIDVY---NHGDLSRDFTYIDDIVEGIIRVQDKPP 236
Query: 330 GP---------------APYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGD 374
P APYR+FN+GN SPV + + LER L ++AKK + M GD
Sbjct: 237 SPTPDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALGIEAKKQFLPMQP-GD 295
Query: 375 VPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYY 412
V T A+ K GY+ D+ TG+ KFV WY ++Y
Sbjct: 296 VHATWADTEDLFKAVGYKSQVDIDTGVAKFVDWYRNFY 333
>TIGR_CMR|GSU_2241 [details] [associations]
symbol:GSU_2241 "capsular polysaccharide biosynthesis
protein I" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:NP_953290.1
ProteinModelPortal:Q74AV9 GeneID:2687517 KEGG:gsu:GSU2241
PATRIC:22027337 ProtClustDB:CLSK746800
BioCyc:GSUL243231:GH27-2213-MONOMER Uniprot:Q74AV9
Length = 336
Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
Identities = 161/338 (47%), Positives = 217/338 (64%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKAR-KALLNNHGVFVIEGD 150
S+LVTGAAGF+G H++ L RGD VVGLDN N+YYD +LK R + L G +
Sbjct: 3 SILVTGAAGFIGFHLTKRLLDRGDRVVGLDNLNDYYDVNLKLDRLRQLEGREGFSFVRTS 62
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
+ D L LF F V++LAAQAGVRY++ NPH+YV SN+ G + +LE C+ +
Sbjct: 63 LADRPALEDLFAGQRFDVVVNLAAQAGVRYSITNPHAYVDSNLVGFINILEGCRHHGVK- 121
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFF 270
+V+ASSSSVYG N +PFS D P SLYAATKKA E +AHTY+ +YGL TGLRFF
Sbjct: 122 HLVYASSSSVYGANTAMPFSIHHNVDHPVSLYAATKKANELMAHTYSSLYGLPTTGLRFF 181
Query: 271 TVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTSAG 330
TVYGPWGRPDMA F FT+ IL+G+PI VY N + RDFTY+DDIV+G +D +
Sbjct: 182 TVYGPWGRPDMALFLFTKAILEGRPIDVY---NFGKMQRDFTYVDDIVEGVTRVMDRTPE 238
Query: 331 P---------------APYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDV 375
P APYRI+N+GN +PV + + +E++L + A+KN++ + GDV
Sbjct: 239 PNPAWSGARPDPGTSYAPYRIYNIGNNNPVELLAFIEAIEQNLGITAQKNLLPLQA-GDV 297
Query: 376 PFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYYG 413
P T+A++ + G++P T + G+++FV WY YYG
Sbjct: 298 PATYADVDDLMNDVGFKPATPIGEGIERFVEWYRGYYG 335
>UNIPROTKB|Q489C2 [details] [associations]
symbol:CPS_0592 "Capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 153/337 (45%), Positives = 211/337 (62%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M LVTGAAGF+G+ V L G VVG+DN N+YYD +LK+AR A + + I+ D
Sbjct: 1 MKYLVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMD 60
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I D ++A+LF A F V+HLAAQAGVRY+++NP +Y SN+ G + +LE C++ N
Sbjct: 61 IADRNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRN-NQVK 119
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFF 270
+++ASSSSVYGLN VPFS D D P SLYAATKK+ E +AH+Y+H+Y + TGLRFF
Sbjct: 120 HLIYASSSSVYGLNNKVPFSTKDTVDHPVSLYAATKKSNELMAHSYSHLYNIPTTGLRFF 179
Query: 271 TVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDT--- 327
TVYG WGRPDMA + FT+ IL G I + N+ D+ RDFT++DDIV+G + D
Sbjct: 180 TVYGSWGRPDMAPYIFTKKILNGDTIDI---NNNGDMWRDFTHVDDIVEGVIRIADVIPE 236
Query: 328 --------SAGPA----PYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDV 375
S PA PY ++N+G+ SP+++ V +E L ++AKKN EM GDV
Sbjct: 237 RDAEWKVESGSPATSSAPYSVYNIGHGSPISLMDFVKAIEDELGIEAKKNFREMQP-GDV 295
Query: 376 PFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYY 412
T+A+ K Y P ++ G+ + V W+ +Y
Sbjct: 296 YQTYADTQDLFKATNYVPKISVKEGVAELVVWFKDFY 332
>TIGR_CMR|CPS_0592 [details] [associations]
symbol:CPS_0592 "capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 153/337 (45%), Positives = 211/337 (62%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M LVTGAAGF+G+ V L G VVG+DN N+YYD +LK+AR A + + I+ D
Sbjct: 1 MKYLVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMD 60
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I D ++A+LF A F V+HLAAQAGVRY+++NP +Y SN+ G + +LE C++ N
Sbjct: 61 IADRNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRN-NQVK 119
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFF 270
+++ASSSSVYGLN VPFS D D P SLYAATKK+ E +AH+Y+H+Y + TGLRFF
Sbjct: 120 HLIYASSSSVYGLNNKVPFSTKDTVDHPVSLYAATKKSNELMAHSYSHLYNIPTTGLRFF 179
Query: 271 TVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDT--- 327
TVYG WGRPDMA + FT+ IL G I + N+ D+ RDFT++DDIV+G + D
Sbjct: 180 TVYGSWGRPDMAPYIFTKKILNGDTIDI---NNNGDMWRDFTHVDDIVEGVIRIADVIPE 236
Query: 328 --------SAGPA----PYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDV 375
S PA PY ++N+G+ SP+++ V +E L ++AKKN EM GDV
Sbjct: 237 RDAEWKVESGSPATSSAPYSVYNIGHGSPISLMDFVKAIEDELGIEAKKNFREMQP-GDV 295
Query: 376 PFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYY 412
T+A+ K Y P ++ G+ + V W+ +Y
Sbjct: 296 YQTYADTQDLFKATNYVPKISVKEGVAELVVWFKDFY 332
>UNIPROTKB|Q0BYW6 [details] [associations]
symbol:HNE_2639 "UDP-glucuronate 5'-epimerase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0050379
"UDP-glucuronate 5'-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000168000 KO:K08679 GO:GO:0050379 RefSeq:YP_761327.1
ProteinModelPortal:Q0BYW6 STRING:Q0BYW6 GeneID:4289771
KEGG:hne:HNE_2639 PATRIC:32218139 OMA:NSAYSAN
BioCyc:HNEP228405:GI69-2655-MONOMER Uniprot:Q0BYW6
Length = 334
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 148/336 (44%), Positives = 203/336 (60%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG- 149
M +LVTGAAGF+G+ ++L L K G V G+D F YYDP LK+ R A L F +E
Sbjct: 1 MKILVTGAAGFIGSEMALRLLKEGHSVTGVDCFTPYYDPQLKEDRAARLTAFDDFRLERI 60
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
I D++ + +F V+H AAQAGVRY++ +P ++ +NI G +++ + Q
Sbjct: 61 RIEDSEAMEAVFQRDTPEMVLHFAAQAGVRYSLDHPRDFIDANIVGSFNIIDLSRRHGTQ 120
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRF 269
+V AS+SS YG N+ PF E D P ++YAATK A E IAH++ H+YG+ T LRF
Sbjct: 121 -HLVMASTSSAYGANQKFPFEERDSAPYPLTIYAATKLASELIAHSHAHLYGVPTTVLRF 179
Query: 270 FTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDT-- 327
F+VYGPWGRPDMA+F FT I +G+PI V+ NH DL RDFTYIDD+V+ +DT
Sbjct: 180 FSVYGPWGRPDMAFFLFTDKIFKGQPIDVF---NHGDLLRDFTYIDDLVEAIRRLMDTPP 236
Query: 328 ----------SAGP-APYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVP 376
S P APYR+ N+GN SPV + + +E + KA+KN+I+M GDV
Sbjct: 237 VVGNHIIRGDSLSPVAPYRLVNIGNASPVRLMDYIEAIEGAIGRKAEKNMIDMQP-GDVK 295
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYY 412
T A++ GY P TD +TG+ +FV WY Y+
Sbjct: 296 QTFADVRLLDALTGYTPDTDYRTGIARFVDWYRDYF 331
>UNIPROTKB|Q8ECF3 [details] [associations]
symbol:wbpP "UDP-GlkcNAc C4 epimerase WbpP" species:211586
"Shewanella oneidensis MR-1" [GO:0000271 "polysaccharide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 98/330 (29%), Positives = 164/330 (49%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGV-F-VIEGDI 151
L+TG AGF+G+++ L K V+GLDNF +L + + + + + F I GDI
Sbjct: 19 LITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFINGDI 78
Query: 152 NDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPS 211
D + + + V + V+H AA V ++ +P + +NI G + +L+A K A + S
Sbjct: 79 RDYAICEAVVNGVDY--VLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVK-S 135
Query: 212 IVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 271
+A+SSS YG + +P E + P S YA TK E A Y YG GLR+F
Sbjct: 136 FTYAASSSTYGDHPALPKVEQN-IGNPLSPYAVTKYVNELYASVYARTYGFETIGLRYFN 194
Query: 272 VYGPWGRPDMAYFS----FTRNILQGKPITVYRGKNHVDLARDFTYIDDIVK-GCLGSLD 326
V+G P+ AY + +T ++++G+ + + G + +RDF YID++V+ L +
Sbjct: 195 VFGRRQDPNGAYAAVIPKWTSSMIKGEDVFI-NGDG--ETSRDFCYIDNVVQMNILAA-- 249
Query: 327 TSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGN-----GDVPFTHAN 381
T+A A ++N+ T+ L ++ L NV + P GDV + A+
Sbjct: 250 TAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGI-NVNQNPNYRDFRAGDVRHSQAD 308
Query: 382 ISSAQKEFGYRPTTDLQTGLKKFVRWYLSY 411
+S A GY+ T + G+ + + WY +
Sbjct: 309 VSKAVTRLGYQYTHKILEGISEAMPWYKEF 338
>TIGR_CMR|SO_3189 [details] [associations]
symbol:SO_3189 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 98/330 (29%), Positives = 164/330 (49%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGV-F-VIEGDI 151
L+TG AGF+G+++ L K V+GLDNF +L + + + + + F I GDI
Sbjct: 19 LITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFINGDI 78
Query: 152 NDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPS 211
D + + + V + V+H AA V ++ +P + +NI G + +L+A K A + S
Sbjct: 79 RDYAICEAVVNGVDY--VLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVK-S 135
Query: 212 IVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 271
+A+SSS YG + +P E + P S YA TK E A Y YG GLR+F
Sbjct: 136 FTYAASSSTYGDHPALPKVEQN-IGNPLSPYAVTKYVNELYASVYARTYGFETIGLRYFN 194
Query: 272 VYGPWGRPDMAYFS----FTRNILQGKPITVYRGKNHVDLARDFTYIDDIVK-GCLGSLD 326
V+G P+ AY + +T ++++G+ + + G + +RDF YID++V+ L +
Sbjct: 195 VFGRRQDPNGAYAAVIPKWTSSMIKGEDVFI-NGDG--ETSRDFCYIDNVVQMNILAA-- 249
Query: 327 TSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGN-----GDVPFTHAN 381
T+A A ++N+ T+ L ++ L NV + P GDV + A+
Sbjct: 250 TAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGI-NVNQNPNYRDFRAGDVRHSQAD 308
Query: 382 ISSAQKEFGYRPTTDLQTGLKKFVRWYLSY 411
+S A GY+ T + G+ + + WY +
Sbjct: 309 VSKAVTRLGYQYTHKILEGISEAMPWYKEF 338
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 105/323 (32%), Positives = 155/323 (47%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M LVTGAAGF+G+ + L G VVGLDNF +L+ N+ VFV E D
Sbjct: 1 MRALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLAD---NSAHVFV-EAD 56
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I A L A + + V HLAAQ VR ++ +P N+ G V L EA + +
Sbjct: 57 IVTADLHA-ILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRK 115
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFF 270
+ +S S+YG P E TD PAS YAA K AGE +T+ H+YGL + +
Sbjct: 116 IVHTSSGGSIYGTPPEYPTPETAPTD-PASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPA 174
Query: 271 TVYGPWGRP--DMAYFS-FTRNILQGKPITVYR-GKNHVDLARDFTYIDDIVKGCLG-SL 325
VYGP P + + F + +L GKP V+ G N RD+ ++DD+V + S
Sbjct: 175 NVYGPRQDPHGEAGVVAIFAQALLSGKPTRVFGDGTN----TRDYVFVDDVVDAFVRVSA 230
Query: 326 DTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSA 385
D G R FN+G + +L + + + P GD+ + +I A
Sbjct: 231 DVGGG---LR-FNIGTGKETSDRQLHSAVAAAVGGPDDPE-FHPPRLGDLKRSCLDIGLA 285
Query: 386 QKEFGYRPTTDLQTGLKKFVRWY 408
++ G+RP +L G+++ V ++
Sbjct: 286 ERVLGWRPQIELADGVRRTVEYF 308
>UNIPROTKB|Q47Y09 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 93/332 (28%), Positives = 162/332 (48%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNH--GVFVIEGDI 151
L+TG AGF+G+++ L VVGLDNF + + + + + + ++GDI
Sbjct: 19 LITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKGDI 78
Query: 152 N---DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
D + + + +++H AA V ++ +P +NI G +T+L A K
Sbjct: 79 RQLEDCQTALSHYKS-GVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQV 137
Query: 209 QPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
+ S V+A+SSS YG + +P E D +P S YA TK E A ++ YGL+ TGLR
Sbjct: 138 K-SFVYAASSSTYGDHPALPKVE-DAIGKPLSPYAVTKYVNELYADVFHKTYGLNCTGLR 195
Query: 269 FFTVYGPWGRPDMAYFS----FTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKG-CLG 323
+F V+G PD AY + +T ++ + + + G + +RDF ++++ V+ L
Sbjct: 196 YFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLI-NGDG--ETSRDFCFVENAVQANILA 252
Query: 324 SLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKA----KKNVIEMPGNGDVPFTH 379
+ AG +++N+ ++ L N L+ L+ K + GDV +
Sbjct: 253 ATANDAGKN--QVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTYQDFRAGDVRHSQ 310
Query: 380 ANISSAQKEFGYRPTTDLQTGLKKFVRWYLSY 411
A+IS A+ G+ P +Q G+ K + WY+ +
Sbjct: 311 ADISKAKSLIGFEPEFKIQQGIDKAMPWYIKF 342
>TIGR_CMR|CPS_3643 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 93/332 (28%), Positives = 162/332 (48%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNH--GVFVIEGDI 151
L+TG AGF+G+++ L VVGLDNF + + + + + + ++GDI
Sbjct: 19 LITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKGDI 78
Query: 152 N---DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
D + + + +++H AA V ++ +P +NI G +T+L A K
Sbjct: 79 RQLEDCQTALSHYKS-GVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQV 137
Query: 209 QPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
+ S V+A+SSS YG + +P E D +P S YA TK E A ++ YGL+ TGLR
Sbjct: 138 K-SFVYAASSSTYGDHPALPKVE-DAIGKPLSPYAVTKYVNELYADVFHKTYGLNCTGLR 195
Query: 269 FFTVYGPWGRPDMAYFS----FTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKG-CLG 323
+F V+G PD AY + +T ++ + + + G + +RDF ++++ V+ L
Sbjct: 196 YFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLI-NGDG--ETSRDFCFVENAVQANILA 252
Query: 324 SLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKA----KKNVIEMPGNGDVPFTH 379
+ AG +++N+ ++ L N L+ L+ K + GDV +
Sbjct: 253 ATANDAGKN--QVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTYQDFRAGDVRHSQ 310
Query: 380 ANISSAQKEFGYRPTTDLQTGLKKFVRWYLSY 411
A+IS A+ G+ P +Q G+ K + WY+ +
Sbjct: 311 ADISKAKSLIGFEPEFKIQQGIDKAMPWYIKF 342
>TIGR_CMR|CBU_0677 [details] [associations]
symbol:CBU_0677 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HSSP:P09147
EMBL:AF387640 ProteinModelPortal:Q93N66 Uniprot:Q93N66
Length = 344
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 99/318 (31%), Positives = 157/318 (49%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGV-FVIEGDIN 152
+VTG AGF+G+H+ L G V +DN + +L+ +A NN + F I+ DI
Sbjct: 7 IVTGGAGFIGSHMVDLLLDCGFQVRVIDNLKGGHRRNLE--HRA--NNPDLTFEIK-DIC 61
Query: 153 DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
+ LF+ V + V H A + +++NP Y+ +N+ G V +LE ++AN + +
Sbjct: 62 ELSAPHPLFENVDY--VFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLECARAANVK-KL 118
Query: 213 VWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTV 272
V+A+SSS YGL + VP E D P YA +K GEE A + +YGL + +R F
Sbjct: 119 VYAASSSCYGLAD-VPTRE-DHPIAPQYPYALSKYLGEEAAFHWFQVYGLPVNSIRIFNA 176
Query: 273 YGPWGRPDMAY---FS-FTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDT- 327
YG R Y F F + L KP TV RDF Y+ D+ + L + +T
Sbjct: 177 YGTRVRTTGVYGAVFGVFFKQKLADKPFTVVGDGTQ---RRDFLYVTDVARAFLKAAETR 233
Query: 328 SAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQK 387
G +NLG +P ++ +LV ++ ++ K+ PG D T A+IS ++
Sbjct: 234 KVGET----WNLGAGNPQSINRLVELIGGEVEYIPKR-----PGEPDC--TWADISKIKR 282
Query: 388 EFGYRPTTDLQTGLKKFV 405
+ G+ PT G+ + +
Sbjct: 283 DLGWEPTITFADGVSRMM 300
>TIGR_CMR|CHY_0545 [details] [associations]
symbol:CHY_0545 "UDP-glucose 4-epimerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_359403.1 ProteinModelPortal:Q3AEN1 SMR:Q3AEN1
STRING:Q3AEN1 GeneID:3728483 KEGG:chy:CHY_0545 PATRIC:21274237
OMA:DTEDGSC BioCyc:CHYD246194:GJCN-546-MONOMER Uniprot:Q3AEN1
Length = 327
Score = 285 (105.4 bits), Expect = 4.7e-25, P = 4.7e-25
Identities = 89/340 (26%), Positives = 162/340 (47%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
+LVTG AG++G+H+ L + + V+ +DN L K K ++ ++ GD
Sbjct: 2 ILVTGGAGYIGSHIVRQLCLKNEKVLVVDN--------LSKGHKKAVDTRAKLIV-GDFG 52
Query: 153 DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
D LL ++F V+H+AAQ+ V +M P Y NI+ ++LL+ AN + +
Sbjct: 53 DENLLLEIFKKYDIKAVIHMAAQSLVGESMSQPEKYFEENISKTLSLLKVMLKANVK-KM 111
Query: 213 VWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTV 272
V++S+++VYG E P +E D +P ++Y +K E+ Y I+G + LR+F
Sbjct: 112 VFSSTAAVYGEPEKWPITE-DFPQKPTNVYGYSKLVIEQCLEWYRQIHGFNYVSLRYFNA 170
Query: 273 YG--PWG------RPDMAYFSFTRNILQGKP--ITVYRGKNHVD----LARDFTYIDDIV 318
G P G P+ ++ G+ +TV+ G ++ RD+ +++D+
Sbjct: 171 AGADPSGDIGEDHNPETHLIPLIFKVILGEQEELTVF-GTDYPTPDGTCIRDYIHVNDLA 229
Query: 319 KGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFT 378
+ + +L+ ++NLGN +V +++ + E VK K + GD
Sbjct: 230 EAHILALN-KLNKDESGVYNLGNQKGFSVKEIIKVAEEVTGVKVKVRYGQRRP-GDPAVL 287
Query: 379 HANISSAQKEFGYRPTT-DLQTGLKKFVRWYLSY-YGYNR 416
A+ QKE + P D++T ++ W+ + GY+R
Sbjct: 288 VASSEKIQKELNFTPKFGDIKTIVQTAWEWHKNNPRGYDR 327
>TAIR|locus:2138121 [details] [associations]
symbol:UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AL078468 EMBL:AL161560 KO:K01784 GO:GO:0042546
ProtClustDB:PLN02240 EMBL:BT008539 IPI:IPI00516246 PIR:T08911
RefSeq:NP_194123.1 UniGene:At.3390 ProteinModelPortal:Q9T0A7
SMR:Q9T0A7 IntAct:Q9T0A7 STRING:Q9T0A7 PaxDb:Q9T0A7 PRIDE:Q9T0A7
EnsemblPlants:AT4G23920.1 GeneID:828492 KEGG:ath:AT4G23920
TAIR:At4g23920 InParanoid:Q9T0A7 OMA:THAPIDA PhylomeDB:Q9T0A7
Genevestigator:Q9T0A7 GermOnline:AT4G23920 Uniprot:Q9T0A7
Length = 350
Score = 282 (104.3 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 97/346 (28%), Positives = 163/346 (47%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARK-ALLNNHGVFVIEGD 150
SVLVTG AG++G+H L L + G V +DN++N SL++ +K A N + + + D
Sbjct: 4 SVLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVD 63
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
+ D L K+F F V+H A V +++ P Y ++NI G VTLLE +
Sbjct: 64 LRDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCK- 122
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYG-LSITGLRF 269
++V++SS++VYG + VP +E + + Y TK EEI + I LR+
Sbjct: 123 NLVFSSSATVYGWPKEVPCTE-ESPISATNPYGRTKLFIEEICRDVHRSDSEWKIILLRY 181
Query: 270 FTVYG----------PWGRPDMAYFSFTRNILQGK-P-ITV----YRGKNHVDLARDFTY 313
F G P G P+ + + + G+ P +TV Y+ K+ + RD+ +
Sbjct: 182 FNPVGAHPSGYIGEDPLGVPNNL-MPYVQQVAVGRRPHLTVFGTDYKTKDGTGV-RDYIH 239
Query: 314 IDDIVKGCLGSLDTSAG-PAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGN 372
+ D+ G + +L ++NLG + +V ++V E K KK + M G
Sbjct: 240 VMDLADGHIAALRKLDDLKISCEVYNLGTGNGTSVLEMVAAFE---KASGKKIPLVMAGR 296
Query: 373 --GDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSY-YGYN 415
GD +A+ A++E ++ ++ + W + YGYN
Sbjct: 297 RPGDAEVVYASTEKAERELNWKAKNGIEEMCRDLWNWASNNPYGYN 342
>UNIPROTKB|Q14376 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=EXP;IDA] [GO:0019388 "galactose catabolic
process" evidence=IDA;TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 GO:GO:0000166 GO:GO:0044281
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 EMBL:AL031295 OMA:ADKAWNA CTD:2582
EMBL:L41668 EMBL:AF022382 EMBL:BC001273 EMBL:BC050685
IPI:IPI00553131 RefSeq:NP_000394.2 RefSeq:NP_001008217.1
RefSeq:NP_001121093.1 UniGene:Hs.632380 PDB:1EK5 PDB:1EK6 PDB:1HZJ
PDB:1I3K PDB:1I3L PDB:1I3M PDB:1I3N PDBsum:1EK5 PDBsum:1EK6
PDBsum:1HZJ PDBsum:1I3K PDBsum:1I3L PDBsum:1I3M PDBsum:1I3N
ProteinModelPortal:Q14376 SMR:Q14376 IntAct:Q14376 STRING:Q14376
PhosphoSite:Q14376 DMDM:68056598 PaxDb:Q14376 PRIDE:Q14376
DNASU:2582 Ensembl:ENST00000374497 GeneID:2582 KEGG:hsa:2582
UCSC:uc001bhv.1 GeneCards:GC01M024122 HGNC:HGNC:4116 HPA:HPA007340
MIM:230350 MIM:606953 neXtProt:NX_Q14376 Orphanet:79238
PharmGKB:PA28531 HOVERGEN:HBG001396 InParanoid:Q14376
OrthoDB:EOG4B5P5D PhylomeDB:Q14376 BioCyc:MetaCyc:HS04117-MONOMER
SABIO-RK:Q14376 BindingDB:Q14376 ChEMBL:CHEMBL5843
EvolutionaryTrace:Q14376 GenomeRNAi:2582 NextBio:10213
ArrayExpress:Q14376 Bgee:Q14376 CleanEx:HS_GALE
Genevestigator:Q14376 GermOnline:ENSG00000117308 Uniprot:Q14376
Length = 348
Score = 275 (101.9 bits), Expect = 7.7e-24, P = 7.7e-24
Identities = 102/337 (30%), Positives = 158/337 (46%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYY--DPSLKKARKAL--LNNHGVFVIE 148
VLVTG AG++G+H L L + G V +DNF+N + SL ++ + + L V E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
DI D L +LF +F V+H A V ++Q P Y N+ G + LLE K A+
Sbjct: 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK-AHG 123
Query: 209 QPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAH-------TYNHIY- 260
++V++SS++VYG + +P EA T + Y +K EE+ T+N +
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLL 183
Query: 261 -GLSITGLRFFTVYG--PWGRPD--MAYFSFTRNILQGKPITVYRGKNHVDL-----ARD 310
+ TG G P G P+ M Y S I + + + V+ G N D RD
Sbjct: 184 RYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVA-IGRREALNVF-G-NDYDTEDGTGVRD 240
Query: 311 FTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMP 370
+ ++ D+ KG + +L RI+NLG + +V ++V +E+ K V+
Sbjct: 241 YIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARR 300
Query: 371 GNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
GDV +AN S AQ+E G+ L + RW
Sbjct: 301 -EGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRW 336
>TIGR_CMR|CBU_0829 [details] [associations]
symbol:CBU_0829 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000167994 RefSeq:NP_819849.2 ProteinModelPortal:Q83DA9
PRIDE:Q83DA9 GeneID:1208722 KEGG:cbu:CBU_0829 PATRIC:17930355
OMA:ANICAMK ProtClustDB:CLSK914342
BioCyc:CBUR227377:GJ7S-824-MONOMER Uniprot:Q83DA9
Length = 331
Score = 274 (101.5 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 96/334 (28%), Positives = 151/334 (45%)
Query: 90 GMSVLVTGAAGFVGTH-VSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIE 148
G +V G AG +G+H V L++ V+ DNF +L +A + ++ I
Sbjct: 6 GKKFVVIGGAGLIGSHTVDRLLQEDVAEVIIYDNFVRGTRENLAQALRDPRTK--IYDIG 63
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
GDIN +L V V H AA + + P S +NI G +LE C +
Sbjct: 64 GDINQTDILNTALKGV--DGVFHFAA-LWLLQCYEYPRSAFQTNIQGTFNVLETCVAQGV 120
Query: 209 QPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
+ +V++SS+SVYG P +EA + + Y ATK AGE +A Y+H YGL GLR
Sbjct: 121 K-RLVFSSSASVYGDALEEPMTEAHPFNS-RTFYGATKIAGEAMATAYHHRYGLPFVGLR 178
Query: 269 FFTVYGPWGRPDM--AYFSFTRNIL----QGKPITVYRGKNHVDLARDFTYIDDIVKG-- 320
+ VYGP R D AY + +L +G+P+T+Y + A DF Y++D
Sbjct: 179 YMNVYGP--RQDYRGAYIAVIMKMLDALDKGQPMTLYGDGSQ---AYDFVYVEDCAAANI 233
Query: 321 CLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHA 380
C DT +N+G ++ +L ++ K+ + I+ G F
Sbjct: 234 CAMKADTVD-----EYYNVGTGKRTSILELAKEIQ---KITGTSDNIQFLPQGTT-FVKN 284
Query: 381 NISSAQK---EFGYRPTTDLQTGLKKFVRWYLSY 411
I +K + G++ L GL++ + W S+
Sbjct: 285 RIGCPKKAAEQIGFKAEVGLTEGLQRLIEWRRSH 318
>TIGR_CMR|CJE_1513 [details] [associations]
symbol:CJE_1513 "NAD-dependent epimerase/dehydratase
family protein" species:195099 "Campylobacter jejuni RM1221"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
RefSeq:YP_179498.1 ProteinModelPortal:Q5HT87 STRING:Q5HT87
GeneID:3232144 KEGG:cjr:CJE1513 PATRIC:20044818 OMA:EVFRLCC
ProtClustDB:CLSK864552 BioCyc:CJEJ195099:GJC0-1541-MONOMER
Uniprot:Q5HT87
Length = 323
Score = 271 (100.5 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 85/322 (26%), Positives = 159/322 (49%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNY-YDPSLKKARKALLNNHGVFVIEGD 150
++LVTGA GF+G+H+ +L K+G V L +N++ + L+K+ L + + V+ GD
Sbjct: 3 NILVTGADGFIGSHLCESLVKKGFKVRALSQYNSFNFWGHLEKS--PFLKD--MEVVSGD 58
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
+ D+ K+ + + HL A + Y+ P SYV +N+ G + +LEA K N
Sbjct: 59 LRDSFFCEKITKNI--DAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAKK-NEIS 115
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFF 270
+ S+S VYG VP E QP S Y+A+K A + +A +Y + + L++ R F
Sbjct: 116 HFIHTSTSEVYGTAFYVPIDEKHPL-QPQSPYSASKIAADMMALSYYNSFNLNVNIARPF 174
Query: 271 TVYGPWGRPDMAYFSFTRNILQG-KPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTSA 329
YGP + IL G K I + + RD ++ D +G + L+
Sbjct: 175 NTYGPRQSARAIIPTIITQILSGAKEIKL----GDLSPKRDLNFVLDTCEGFISLLNLKH 230
Query: 330 GPAPYRIFNLGNTSPVTVPKLVNILERHL--KVKAKKNVIEM-PGNGDVPFTHANISSAQ 386
++N+G+ ++ +++N++++ L KVK ++ + P N +V + + +
Sbjct: 231 FG---EVYNIGSGVEYSMQEVLNLIQKILDSKVKIIQDEQRLRPKNSEVFRLCCDANKLK 287
Query: 387 KEFGYRPTTDLQTGLKKFVRWY 408
K ++ L+ GL++ + ++
Sbjct: 288 KATNWQSKISLEEGLRQSIEYF 309
>UNIPROTKB|I3LL84 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 EMBL:FP475977 RefSeq:XP_003356250.1
Ensembl:ENSSSCT00000028713 GeneID:100621392 KEGG:ssc:100621392
Uniprot:I3LL84
Length = 348
Score = 268 (99.4 bits), Expect = 5.0e-23, P = 5.0e-23
Identities = 100/337 (29%), Positives = 153/337 (45%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYY--DPSLKKARKAL--LNNHGVFVIE 148
VLVTG AG++G+H L L + G V +DNF+N S+ ++ + + L V E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGGSSMPESLRRVQELTGRSVEFEE 64
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
DI D L +LF F V+H A V ++Q P Y N+ G + LLE K A+
Sbjct: 65 MDILDQAALQRLFKKYHFVAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK-AHG 123
Query: 209 QPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHI-YGLSITGL 267
++V++SS++VYG + +P EA T + Y +K EE+ + L
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKAWNAVLL 183
Query: 268 RFFTVYG----------PWGRPD--MAYFSFTRNILQGKPITVYRGKNHVDL-----ARD 310
R+F G P G P+ M Y S I + + + V+ G N D RD
Sbjct: 184 RYFNPIGAHASGCIGEDPQGIPNNLMPYVSQVA-IGRREALNVF-G-NDYDTEDGTGVRD 240
Query: 311 FTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMP 370
+ ++ D+ KG + +L RI+NLG + +V ++V +E+ K V+
Sbjct: 241 YIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVRAMEKASGKKIPYKVVARR 300
Query: 371 GNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
GDV +AN S A KE G+ L + RW
Sbjct: 301 -EGDVAACYANPSLALKELGWTAALGLDRMCEDLWRW 336
>TIGR_CMR|BA_0507 [details] [associations]
symbol:BA_0507 "NAD-dependent epimerase/dehydratase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000168004 HSSP:P32054 RefSeq:NP_843043.1
RefSeq:YP_017126.1 RefSeq:YP_026759.1 ProteinModelPortal:Q81YX3
DNASU:1087740 EnsemblBacteria:EBBACT00000010883
EnsemblBacteria:EBBACT00000018378 EnsemblBacteria:EBBACT00000021242
GeneID:1087740 GeneID:2816749 GeneID:2850006 KEGG:ban:BA_0507
KEGG:bar:GBAA_0507 KEGG:bat:BAS0479 OMA:IRWSYAV
ProtClustDB:CLSK915839 BioCyc:BANT260799:GJAJ-522-MONOMER
BioCyc:BANT261594:GJ7F-544-MONOMER Uniprot:Q81YX3
Length = 321
Score = 264 (98.0 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 92/335 (27%), Positives = 158/335 (47%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNF----NNYYDPSLKKARKALLNNHGVFVIEG 149
L+TG AGF+G+H++ L RG V +DNF N Y+D +K+ R ++ V+
Sbjct: 6 LITGGAGFIGSHLAEELVGRGYNVTIVDNFYKGKNKYHDELMKEIRVIPIS-----VL-- 58
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
D N L D V HLAA GV+ M+ + +N G +L+A +
Sbjct: 59 DKNSIYELVNQHDVV-----FHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKK 113
Query: 210 PSIVWASSSSVYGLNENVPFSE-ADR----TDQPASLYAATKKAGEEIAHTYNHIYGLSI 264
+V+AS+S VYG PFSE DR T + YA K E + Y + GL +
Sbjct: 114 --VVFASTSEVYG-KAKPPFSEEGDRLYGATSKIRWSYAICKTLEETLCLGYA-LEGLPV 169
Query: 265 TGLRFFTVYGPWGRPDMAYFS----FTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKG 320
T +R+F +YGP + D Y F LQG+ I VY G + R FTY+ D V+
Sbjct: 170 TIVRYFNIYGPRAK-DGPYAGVIPRFISAALQGEDILVY-GDG--EQTRCFTYVSDAVEA 225
Query: 321 CLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMP-------GNG 373
+ ++D I N+G+ + ++ ++ ++++ +K ++++P G
Sbjct: 226 TIRAMDEKVNG---EIINIGSENEKSIKEVAEVIKKLTDSSSK--IVQVPFEEVYPHGFE 280
Query: 374 DVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWY 408
++P +++ + ++ + GLK+ ++W+
Sbjct: 281 EIPNRRPDVTKLKDLVQFQAKVTWEDGLKETIKWF 315
>TAIR|locus:2123466 [details] [associations]
symbol:UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214 InterPro:IPR016040
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
EMBL:AL161518 ProtClustDB:PLN02240 EMBL:AF080118 EMBL:AL049525
EMBL:AY065354 EMBL:AY117180 EMBL:AY140073 EMBL:AY085528
IPI:IPI00540537 PIR:T01881 PIR:T04291 RefSeq:NP_192834.1
UniGene:At.48845 ProteinModelPortal:Q9SN58 SMR:Q9SN58 IntAct:Q9SN58
STRING:Q9SN58 PaxDb:Q9SN58 PRIDE:Q9SN58 EnsemblPlants:AT4G10960.1
GeneID:826696 KEGG:ath:AT4G10960 TAIR:At4g10960 InParanoid:Q9SN58
OMA:ADKAWNA PhylomeDB:Q9SN58 Genevestigator:Q9SN58 Uniprot:Q9SN58
Length = 351
Score = 264 (98.0 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 96/353 (27%), Positives = 162/353 (45%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHG--VFVIEG 149
+VLV+G AG++G+H L L G VV +DN +N SL++ +K L HG + +
Sbjct: 5 NVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKK-LAAEHGERLSFHQV 63
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
D+ D L K+F F V+H A V +++ P Y ++N+ G +TLLE +
Sbjct: 64 DLRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCK 123
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAH-TYNHIYGLSITGLR 268
++V++SS++VYG + VP +E + + Y TK EEI Y I LR
Sbjct: 124 -NLVFSSSATVYGSPKEVPCTE-EFPISALNPYGRTKLFIEEICRDVYGSDPEWKIILLR 181
Query: 269 FFTVYG----------PWGRPDMAYFSFTRNILQGK-P-ITV----YRGKNHVDLARDFT 312
+F G P G P+ F + + G+ P +TV Y K+ + RD+
Sbjct: 182 YFNPVGAHPSGDIGEDPRGIPNNL-MPFVQQVAVGRRPHLTVFGNDYNTKDGTGV-RDYI 239
Query: 313 YIDDIVKGCLGSLDTSAG-PAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPG 371
++ D+ G + +L ++NLG + +V ++V+ E K KK + + G
Sbjct: 240 HVIDLADGHIAALRKLEDCKIGCEVYNLGTGNGTSVLEMVDAFE---KASGKKIPLVIAG 296
Query: 372 N--GDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSY-YGYNRGKRVN 421
GD +A+ A+ E ++ ++ + W + YGY+ N
Sbjct: 297 RRPGDAEVVYASTERAESELNWKAKYGIEEMCRDLWNWASNNPYGYDSSSEDN 349
>UNIPROTKB|F1PI88 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
EMBL:AAEX03001747 RefSeq:XP_003638951.1 ProteinModelPortal:F1PI88
Ensembl:ENSCAFT00000020920 GeneID:100855555 KEGG:cfa:100855555
Uniprot:F1PI88
Length = 348
Score = 263 (97.6 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 100/339 (29%), Positives = 157/339 (46%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYD-----P-SLKKARKALLNNHGVFV 146
VLVTG AG++G+H L L + G V +DNF+N P SL++ ++ L V
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGKGSMPESLQRVQE--LTGRSVEF 62
Query: 147 IEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSA 206
E DI D L +LF+ +FT V+H A V ++Q P Y N+ G + LLE + A
Sbjct: 63 EEMDILDQAALQRLFEKHSFTAVIHFAGLKAVGESVQKPLDYYRVNLTGSIQLLEIMR-A 121
Query: 207 NPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHI-YGLSIT 265
+ ++V++SS++VYG + +P EA T + Y +K EE+ +
Sbjct: 122 HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKYFIEEMIRDLCQADKAWNAV 181
Query: 266 GLRFFTVYG----------PWGRPD--MAYFSFTRNILQGKPITVYRGKNHVDL-----A 308
LR+F G P G P+ M Y S I + + + V+ G N D
Sbjct: 182 LLRYFNPIGAHASGCIGEDPQGIPNNLMPYVSQVA-IGRREVLNVF-G-NDYDTEDGTGV 238
Query: 309 RDFTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIE 368
RD+ ++ D+ KG + +L RI+NLG + +V ++V +++ + V+
Sbjct: 239 RDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVEAMKKASGQEIPYKVVA 298
Query: 369 MPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
GDV +AN S A KE G+ L + RW
Sbjct: 299 RR-EGDVAACYANPSLALKELGWTAVLGLDRMCEDLWRW 336
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 263 (97.6 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 88/329 (26%), Positives = 145/329 (44%)
Query: 89 GGMS--VLVTGAAGFVGTHVSLALKKRGDG--VVGLDNFNNYYDPSLKKARKALLNNHGV 144
GG + VLVTG AGF+ +H+ ++L + ++ LD + Y SLK + + N
Sbjct: 14 GGFAKRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLD--YCASLKNL-ETISNKQNY 70
Query: 145 FVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACK 204
I+GDI D+ + LF+ V+H AAQ V + + + N+ G L+ A
Sbjct: 71 KFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH 130
Query: 205 SANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSI 264
A + ++ S+ VYG + + F E+ QP + YA++K A E +Y Y +
Sbjct: 131 EARVE-KFIYVSTDEVYGGSLDKEFDESS-PKQPTNPYASSKAAAECFVQSYWEQYKFPV 188
Query: 265 TGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGS 324
R VYGP P+ F ++LQ G R+F Y D+V+ L
Sbjct: 189 VITRSSNVYGPHQYPEKVIPKFI-SLLQHNRKCCIHGSGLQ--TRNFLYATDVVEAFLTV 245
Query: 325 LDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIE--MPGNGDVPFTHANI 382
L P I+N+G ++V +L L + +K ++ +E + D P
Sbjct: 246 LKKGK---PGEIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRY 302
Query: 383 SSAQKEF---GYRPTTDLQTGLKKFVRWY 408
++ G+RP + G+KK + WY
Sbjct: 303 PMKSEKIHGLGWRPKVPWKEGIKKTIEWY 331
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 263 (97.6 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 88/323 (27%), Positives = 142/323 (43%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDG--VVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
VLVTG AGF+ +HV ++L + +V LD + Y SLK + + + I+GD
Sbjct: 20 VLVTGGAGFIASHVIVSLVEDYPNYMIVNLDKLD--YCASLKNL-ETISDKQNYKFIQGD 76
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I D+ + LF+ V+H AAQ V + + + N+ G LL A A +
Sbjct: 77 ICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLLSAAHEARVE- 135
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFF 270
++ S+ VYG + + F E+ QP + YA++K A E +Y Y + R
Sbjct: 136 KFIYVSTDEVYGGSLDKEFDESS-PKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSS 194
Query: 271 TVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTSAG 330
VYGP P+ F ++LQ G R+F Y D+V+ L L
Sbjct: 195 NVYGPHQYPEKVIPKFI-SLLQHNRKCCIHGSGLQ--TRNFLYATDVVEAFLTVLKKGK- 250
Query: 331 PAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIE--MPGNGDVPFTHANISSAQKE 388
P I+N+G ++V +L L + +K ++ +E + D P ++
Sbjct: 251 --PGEIYNIGTNFEMSVLQLAKELIQLIKETKSESEMENWVDYVNDRPTNDMRYPMKSEK 308
Query: 389 F---GYRPTTDLQTGLKKFVRWY 408
G+RP + G+KK + WY
Sbjct: 309 IHGLGWRPKVPWKEGIKKTIEWY 331
>UNIPROTKB|Q3T105 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA CTD:2582
HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:DAAA02006426
EMBL:BC102185 IPI:IPI00686007 RefSeq:NP_001193137.1
UniGene:Bt.12474 SMR:Q3T105 STRING:Q3T105
Ensembl:ENSBTAT00000006586 GeneID:523154 KEGG:bta:523154
InParanoid:Q3T105 NextBio:20873677 Uniprot:Q3T105
Length = 348
Score = 260 (96.6 bits), Expect = 4.2e-22, P = 4.2e-22
Identities = 98/337 (29%), Positives = 154/337 (45%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYY--DPSLKKARKAL--LNNHGVFVIE 148
VLVTG AG++G+H L L + G + +DNF+N S+ ++ + + L V E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPMVIDNFHNAIRGGGSMPESLRRVQDLTGRSVEFEE 64
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
DI D L +LF +F V+H A V ++Q P Y N+ G + LLE + A+
Sbjct: 65 MDILDQAALQRLFKKHSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMR-AHG 123
Query: 209 QPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHI-YGLSITGL 267
++V++SS++VYG + +P EA T + Y +K EE+ + L
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKAWNAVLL 183
Query: 268 RFFTVYG----------PWGRPD--MAYFSFTRNILQGKPITVYRGKNHVDL-----ARD 310
R+F G P G P+ M Y S I + + + V+ G N D RD
Sbjct: 184 RYFNPIGAHASGCIGEDPQGIPNNLMPYVSQVA-IGRREVLNVF-G-NDYDTEDGTGVRD 240
Query: 311 FTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMP 370
+ ++ D+ KG + +L RI+NLG + +V ++V +E+ K V+
Sbjct: 241 YIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARR 300
Query: 371 GNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
GDV +AN S A KE G+ L + RW
Sbjct: 301 -EGDVAACYANPSLALKELGWSAALGLDRMCEDLWRW 336
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 265 (98.3 bits), Expect = 5.6e-22, P = 5.6e-22
Identities = 87/323 (26%), Positives = 145/323 (44%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDG--VVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
+LVTG AGF+ +HV ++L + ++ LD + Y SLK + F I+GD
Sbjct: 25 LLVTGGAGFIASHVVVSLVRNYPNYLIINLDKLD--YCASLKNLETVSEKENYKF-IQGD 81
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I + + +LF+ V+H AAQ V + + + + N+ G L+ A AN +
Sbjct: 82 ICEPHFIKQLFETEKIDIVLHFAAQTHVDLSFWHALEFTYVNVYGTNVLVAAAHEANVE- 140
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFF 270
V+ S+ VYG + + F E+ P + YA++K A E +Y Y + R
Sbjct: 141 KFVYVSTDEVYGGSTDQEFDESS-PKCPTNPYASSKAAAECFVQSYWERYQFPVVITRSS 199
Query: 271 TVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTSAG 330
VYGP P+ F + Q + ++ G R+F Y D+V+ L L
Sbjct: 200 NVYGPHQYPEKVIPKFISLLQQNRKCCIH-GSGLQ--RRNFLYATDVVEAFLTVLKEGK- 255
Query: 331 PAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIE--MPGNGDVPFTHANIS-SAQK 387
P I+N+G +++ +L L +K + ++ +E M D P S++K
Sbjct: 256 --PGEIYNIGTNFEMSIVQLAKELIHLIKKTSSESEMEHWMDYVKDRPTNDLRYPMSSEK 313
Query: 388 --EFGYRPTTDLQTGLKKFVRWY 408
G+RP + G+KK + WY
Sbjct: 314 MHNLGWRPKVPWKEGIKKTIEWY 336
>UNIPROTKB|P09147 [details] [associations]
symbol:galE species:83333 "Escherichia coli K-12"
[GO:0006012 "galactose metabolic process" evidence=IDA;IMP]
[GO:0005975 "carbohydrate metabolic process" evidence=IMP]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0070403 "NAD+ binding" evidence=IDA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA;IDA] [GO:0009242 "colanic acid
biosynthetic process" evidence=IEP;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 Gene3D:3.40.50.720 GO:GO:0070403
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 GO:GO:0009242
GO:GO:0033499 EMBL:X06226 OMA:THAPIDA EMBL:X51449 EMBL:U07867
EMBL:J01613 PIR:S02089 RefSeq:NP_415280.3 RefSeq:YP_489032.1
PDB:1A9Y PDB:1A9Z PDB:1KVQ PDB:1KVR PDB:1KVS PDB:1KVT PDB:1KVU
PDB:1LRJ PDB:1LRK PDB:1LRL PDB:1NAH PDB:1NAI PDB:1UDA PDB:1UDB
PDB:1UDC PDB:1XEL PDB:2UDP PDBsum:1A9Y PDBsum:1A9Z PDBsum:1KVQ
PDBsum:1KVR PDBsum:1KVS PDBsum:1KVT PDBsum:1KVU PDBsum:1LRJ
PDBsum:1LRK PDBsum:1LRL PDBsum:1NAH PDBsum:1NAI PDBsum:1UDA
PDBsum:1UDB PDBsum:1UDC PDBsum:1XEL PDBsum:2UDP
ProteinModelPortal:P09147 SMR:P09147 DIP:DIP-9728N IntAct:P09147
SWISS-2DPAGE:P09147 PRIDE:P09147 EnsemblBacteria:EBESCT00000004431
EnsemblBacteria:EBESCT00000004432 EnsemblBacteria:EBESCT00000004433
EnsemblBacteria:EBESCT00000014770 GeneID:12932906 GeneID:945354
KEGG:ecj:Y75_p0732 KEGG:eco:b0759 PATRIC:32116719 EchoBASE:EB0357
EcoGene:EG10362 ProtClustDB:PRK10675
BioCyc:EcoCyc:UDPGLUCEPIM-MONOMER BioCyc:ECOL316407:JW0742-MONOMER
BioCyc:MetaCyc:UDPGLUCEPIM-MONOMER SABIO-RK:P09147
EvolutionaryTrace:P09147 Genevestigator:P09147 Uniprot:P09147
Length = 338
Score = 258 (95.9 bits), Expect = 7.2e-22, P = 7.2e-22
Identities = 89/341 (26%), Positives = 151/341 (44%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M VLVTG +G++G+H + L + G V+ LDN N S+ + L H FV EGD
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNS-KRSVLPVIERLGGKHPTFV-EGD 58
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I + L+ ++ A V+H A V ++Q P Y +N+ G + L+ A ++AN +
Sbjct: 59 IRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK- 117
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIY-GLSITGLRF 269
+ +++SS++VYG +P+ E+ T P S Y +K E+I SI LR+
Sbjct: 118 NFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRY 177
Query: 270 FTVYGPWGRPDMA---------YFSFTRNILQGK--PITVYRGKNHVDL----ARDFTYI 314
F G DM + + G+ + ++ G ++ RD+ ++
Sbjct: 178 FNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIF-GNDYPTEDGTGVRDYIHV 236
Query: 315 DDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGD 374
D+ G + +++ A I+NLG +V +VN + + GD
Sbjct: 237 MDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRR-EGD 295
Query: 375 VPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSY-YGY 414
+P A+ S A +E +R T L + W + GY
Sbjct: 296 LPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGY 336
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 260 (96.6 bits), Expect = 8.4e-22, P = 8.4e-22
Identities = 90/323 (27%), Positives = 143/323 (44%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDG--VVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
VLVTG AGF+ +HV ++L + +V LD + Y SLK + + N I+GD
Sbjct: 20 VLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLD--YCASLKNL-EPVSNKQNYKFIQGD 76
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I D+ + LF+ V+H AAQ V + + + N+ G L+ A A +
Sbjct: 77 ICDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVE- 135
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFF 270
++ S+ VYG + + F E+ QP + YA++K A E +Y Y + R
Sbjct: 136 KFIYVSTDEVYGGSLDQEFDESS-PKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSS 194
Query: 271 TVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTSAG 330
VYGP P+ F ++LQ G R+F Y D+V+ L L T
Sbjct: 195 NVYGPHQYPEKVIPKFI-SLLQHNRKCCIHGSGLQ--RRNFLYAADVVEAFLTVL-TKGE 250
Query: 331 PAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIE--MPGNGDVPFTHANIS-SAQK 387
P I+N+G ++V +L L + +K ++ E + D P ++K
Sbjct: 251 PG--EIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPMKSEK 308
Query: 388 --EFGYRPTTDLQTGLKKFVRWY 408
G++P + G+KK V WY
Sbjct: 309 IHSLGWKPKVPWEEGIKKTVEWY 331
>UNIPROTKB|Q6A1A4 [details] [associations]
symbol:galE "UDP-galactose 4-epimerase" species:644
"Aeromonas hydrophila" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0006012 "galactose metabolic process"
evidence=IC] [GO:0042803 "protein homodimerization activity"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AJ785765 ProteinModelPortal:Q6A1A4 SMR:Q6A1A4 Uniprot:Q6A1A4
Length = 338
Score = 256 (95.2 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 89/341 (26%), Positives = 150/341 (43%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M VLVTG +G++G+H + L + G VV LDN N S+ + L FV EGD
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQSGHDVVILDNLCNS-KRSVLPVIERLSGKQPTFV-EGD 58
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I + L+ ++ A V+H A V ++ P Y +N+ G + L+ A ++AN +
Sbjct: 59 IRNEALMTEILHDHAIETVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLISAMRAANVK- 117
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYG-LSITGLRF 269
+ +++SS++VYG +P+ E+ T P S Y +K E+I SI LR+
Sbjct: 118 NFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIALLRY 177
Query: 270 FTVYGPWGRPDMA---------YFSFTRNILQGK--PITVYRGKNH----VDLARDFTYI 314
F G DM + + G+ + ++ G ++ RD+ ++
Sbjct: 178 FNPVGAHPSGDMGEDPQGIPNNLIPYIAQVAVGRRDSLAIF-GNDYPPEDATAVRDYIHV 236
Query: 315 DDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGD 374
D+ G + ++ A I+NLG +V +VN + K + +GD
Sbjct: 237 MDLADGHVAAMQQLADKPGVHIYNLGAGIGSSVLDVVNAFSKACGKPVKYHFAPRR-DGD 295
Query: 375 VPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSY-YGY 414
+P A+ + A KE +R T L + W + GY
Sbjct: 296 LPAYWADATKADKELNWRVTRTLDEMAQDTWHWQSRHPQGY 336
>TAIR|locus:2204639 [details] [associations]
symbol:MUR4 "MURUS 4" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISM;IDA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019567 "arabinose biosynthetic process" evidence=IMP]
[GO:0050373 "UDP-arabinose 4-epimerase activity" evidence=IDA]
[GO:0009723 "response to ethylene stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0052542 "defense response by callose deposition"
evidence=RCA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
GO:GO:0045227 GO:GO:0009832 EMBL:AY195742 EMBL:AF083751
EMBL:AC007060 EMBL:AY064973 EMBL:BT002614 EMBL:AF325108
EMBL:AK220800 IPI:IPI00521995 PIR:E86431 RefSeq:NP_001031118.1
RefSeq:NP_174350.2 UniGene:At.20201 ProteinModelPortal:Q9SA77
SMR:Q9SA77 STRING:Q9SA77 PaxDb:Q9SA77 PRIDE:Q9SA77
EnsemblPlants:AT1G30620.1 EnsemblPlants:AT1G30620.2 GeneID:839942
KEGG:ath:AT1G30620 TAIR:At1g30620 eggNOG:COG1087
HOGENOM:HOG000168001 InParanoid:Q9SA77 KO:K12448 OMA:SHPNGYN
PhylomeDB:Q9SA77 ProtClustDB:CLSN2686084
BioCyc:MetaCyc:AT1G30620-MONOMER Genevestigator:Q9SA77
GermOnline:AT1G30620 GO:GO:0050373 GO:GO:0003978 GO:GO:0019567
GO:GO:0006012 GO:GO:0033358 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Uniprot:Q9SA77
Length = 419
Score = 270 (100.1 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 95/349 (27%), Positives = 163/349 (46%)
Query: 86 HRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVF 145
H G VLVTG AG++G+H +L L K V +DN + +++ ++ +
Sbjct: 66 HEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRLQ 125
Query: 146 VIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKS 205
I D+ DAK + K+F AF VMH AA A V + Q P Y H+ + + +LE +
Sbjct: 126 FIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETM-A 184
Query: 206 ANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSIT 265
A+ +++++S+ + YG + +P +E + P + Y KK E+I ++ +++
Sbjct: 185 AHGVKTLIYSSTCATYGEPDIMPITE-ETPQVPINPYGKAKKMAEDIILDFSKNSDMAVM 243
Query: 266 GLRFFTVYG--PWGR------PDM--------AYFSFTRNILQGKPI--TVYRGKNHVDL 307
LR+F V G P GR P++ A F R I+ G I T Y+ +
Sbjct: 244 ILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQIKGTDYKTADGT-C 302
Query: 308 ARDFTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVI 367
RD+ + D+V + +L A P I+N+G +V + V ++ V+ K + +
Sbjct: 303 VRDYIDVTDLVDAHVKALQ-KAKPRKVGIYNVGTGKGSSVKEFVEACKKATGVEIKIDYL 361
Query: 368 EMPGNGDVPFTHANISSAQKEFGYRPT-TDLQTGLKKFVRWY-LSYYGY 414
GD +++ S +KE + T+L+ L+ RW L GY
Sbjct: 362 PRRA-GDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKLHRNGY 409
>UNIPROTKB|P0C7J0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:190485
"Xanthomonas campestris pv. campestris str. ATCC 33913" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE008922 GenomeReviews:AE008922_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
ProtClustDB:CLSK445958 RefSeq:NP_636013.1 ProteinModelPortal:P0C7J0
SMR:P0C7J0 GeneID:1001158 KEGG:xcc:XCC0621 PATRIC:24071892
Uniprot:P0C7J0
Length = 351
Score = 257 (95.5 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 90/341 (26%), Positives = 151/341 (44%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIND 153
LVTG AGF+G + L RG VV LD Y +L N +FV +GDI D
Sbjct: 5 LVTGRAGFIGGNFVLEAVSRGIRVVNLDALT--YAGNLNTLASLEGNADHIFV-KGDIGD 61
Query: 154 AKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKS---ANPQP 210
L+ +L V++ AA++ V +++ P +++ +N+ G + LLEA + A P
Sbjct: 62 GALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDT 121
Query: 211 S-----IVWASSSSVYG-LNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSI 264
+ S+ VYG L E F+E P S Y+A+K A + + ++H YGL +
Sbjct: 122 RRDAFRFLHVSTDEVYGTLGETGKFTETTPY-APNSPYSASKAASDHLVRAFHHTYGLPV 180
Query: 265 TGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGS 324
YGP+ P+ L G+P+ VY V RD+ ++ D +
Sbjct: 181 LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQV---RDWLFVSDHCEAIRTV 237
Query: 325 LDTSAGPAPYRIFNLGNTSPVTVPKLV-NILERHLKV---KAKKN----VIEMPGNGDVP 376
L Y + + V + + +L++H K +++ V + PG+ D
Sbjct: 238 LAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGH-DRR 296
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYYGYNRG 417
+ + S + E G+ P + G+ + V WYL+ + +G
Sbjct: 297 YA-IDASKLKDELGWEPAYTFEQGIAQTVDWYLTNQTWVQG 336
>TIGR_CMR|SO_3167 [details] [associations]
symbol:SO_3167 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:NP_718723.1 ProteinModelPortal:Q8ECH5
SMR:Q8ECH5 GeneID:1170861 KEGG:son:SO_3167 PATRIC:23526018
OMA:IDLIIHK ProtClustDB:CLSK907039 Uniprot:Q8ECH5
Length = 343
Score = 253 (94.1 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 74/238 (31%), Positives = 116/238 (48%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M +LVTG AGF+G+ + L ++ + VV L NF+ S ++ + +N ++ D
Sbjct: 1 MRILVTGGAGFIGSALVRMLIEQTESVV-L-NFDKLTYASHPESLAGVADNERYHFVQAD 58
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKS----- 205
I D L ++ +MHLAA++ V ++ P ++ +NI G TLLEAC+S
Sbjct: 59 ICDRARLEQVLQQFQPDLMMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLEACRSYYQTL 118
Query: 206 ANPQPS---IVWASSSSVYG-LNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYG 261
Q + S+ V+G L E FSE D P+S Y+A+K + + + ++ Y
Sbjct: 119 GQAQQRRFRLHHISTDEVFGSLTETGLFSETSAYD-PSSPYSASKASADHLVRAWHRTYA 177
Query: 262 LSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVK 319
L I YGP+ P+ N LQ KP+ +Y V RD+ Y+DD VK
Sbjct: 178 LPIVITNCSNNYGPFQYPEKLIPLMVSNALQSKPLPIYGNGQQV---RDWLYVDDHVK 232
Score = 186 (70.5 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 62/213 (29%), Positives = 99/213 (46%)
Query: 216 SSSSVYG-LNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYG 274
S+ V+G L E FSE D P+S Y+A+K + + + ++ Y L I YG
Sbjct: 132 STDEVFGSLTETGLFSETSAYD-PSSPYSASKASADHLVRAWHRTYALPIVITNCSNNYG 190
Query: 275 PWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTSAGPAPY 334
P+ P+ N LQ KP+ +Y V RD+ Y+DD VK L + G
Sbjct: 191 PFQYPEKLIPLMVSNALQSKPLPIYGNGQQV---RDWLYVDDHVKALY--LVATQGQLG- 244
Query: 335 RIFNLGN----TSPVTVPKLVNILER----HLKVKAKKN---------VIEMPGNGDVPF 377
+ +N+G T+ V + ++LE H + A N V++ PG+ DV +
Sbjct: 245 QTYNIGGSCEQTNLTVVRHICSLLEELVPTHPQSLAMGNAGFADLIQYVVDRPGH-DVRY 303
Query: 378 THANISSAQKEFGYRPTTDLQTGLKKFVRWYLS 410
+ S Q+E G+RP ++GL+K V W ++
Sbjct: 304 A-IDASKIQRELGWRPQESFESGLRKTVEWIIN 335
>UNIPROTKB|O06329 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IGI;IDA] [GO:0019305 "dTDP-rhamnose biosynthetic process"
evidence=IDA] [GO:0040007 "growth" evidence=IDA;IMP] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IGI]
[GO:0070404 "NADH binding" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00124
InterPro:IPR016040 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:3.40.50.720 EMBL:BX842583 GO:GO:0070404 GO:GO:0045226
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:AYNDARY
PIR:E70566 RefSeq:NP_217981.1 RefSeq:NP_338096.1
RefSeq:YP_006516953.1 HSSP:P95780 ProteinModelPortal:O06329
SMR:O06329 PRIDE:O06329 EnsemblBacteria:EBMYCT00000003518
EnsemblBacteria:EBMYCT00000071206 GeneID:13317071 GeneID:887332
GeneID:926625 KEGG:mtc:MT3570 KEGG:mtu:Rv3464 KEGG:mtv:RVBD_3464
PATRIC:18129579 TubercuList:Rv3464 ProtClustDB:CLSK792508
Uniprot:O06329
Length = 331
Score = 252 (93.8 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 90/326 (27%), Positives = 161/326 (49%)
Query: 91 MSVLVTGAAGFVGTH-VSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLN-NHGVFVIE 148
M +LVTG AGF+GT+ V A+++ D V + + Y R++L + + +++
Sbjct: 1 MRLLVTGGAGFIGTNFVHSAVREHPDDAVTVLDALTYAG-----RRESLADVEDAIRLVQ 55
Query: 149 GDINDAKLLAKLFDAVAFTH-VMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSAN 207
GDI DA+L+++L VA + V+H AA++ V A+ NP ++H+N+ G T+LEA +
Sbjct: 56 GDITDAELVSQL---VAESDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHG 112
Query: 208 PQPSIVWASSSSVYG---LNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSI 264
+ + S+ VYG L++ F+E+ + P+S Y+ATK + + + YG+
Sbjct: 113 VRLHHI--STDEVYGDLELDDRARFTESTPYN-PSSPYSATKAGADMLVRAWVRSYGVRA 169
Query: 265 TGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGS 324
T YGP+ + N+L G+ +Y +V RD+ ++DD
Sbjct: 170 TISNCSNNYGPYQHVEKFIPRQITNVLTGRRPKLYGAGANV---RDWIHVDDHNSAVRRI 226
Query: 325 LDTSAGPAPYRIFNLGNTSPVTVPK-LVNILERHLKVKAKKNVIEMPGNGDVPFTHANIS 383
LD Y I + G +TV + L+ +++R +V + G+ D+ + + S
Sbjct: 227 LDRGRIGRTYLISSEGERDNLTVLRTLLRLMDRD--PDDFDHVTDRVGH-DLRYA-IDPS 282
Query: 384 SAQKEFGYRPT-TDLQTGLKKFVRWY 408
+ E + P TD + GL+ + WY
Sbjct: 283 TLYDELCWAPKHTDFEEGLRTTIDWY 308
>TIGR_CMR|BA_1230 [details] [associations]
symbol:BA_1230 "dTDP-glucose 4,6-dehydratase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009243
"O antigen biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009225
GO:GO:0008460 TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006
KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM RefSeq:NP_843702.1
RefSeq:YP_017844.1 RefSeq:YP_027409.1 PDB:4EGB PDBsum:4EGB
ProteinModelPortal:Q81TP0 SMR:Q81TP0 DNASU:1085406
EnsemblBacteria:EBBACT00000011863 EnsemblBacteria:EBBACT00000016310
EnsemblBacteria:EBBACT00000023983 GeneID:1085406 GeneID:2815086
GeneID:2848339 KEGG:ban:BA_1230 KEGG:bar:GBAA_1230 KEGG:bat:BAS1137
ProtClustDB:CLSK916141 BioCyc:BANT260799:GJAJ-1213-MONOMER
BioCyc:BANT261594:GJ7F-1267-MONOMER Uniprot:Q81TP0
Length = 322
Score = 252 (93.8 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 84/323 (26%), Positives = 154/323 (47%)
Query: 91 MSVLVTGAAGFVGTH-VSLALKKRGD-GVVGLDNFNNYYDPSLKKARKALLNNHGVFVIE 148
M++LVTG AGF+G++ V L+ ++ D Y +L K++ ++ + ++
Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALT--YSGNLNNV-KSIQDHPNYYFVK 57
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
G+I + +LL + +++ AA++ V +++NP + +N+ G VTLLE K P
Sbjct: 58 GEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-P 116
Query: 209 QPSIVWASSSSVYG-LNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGL 267
+V S+ VYG L + F+E + P S Y+++K + + IA Y Y L +
Sbjct: 117 HIKLVQVSTDEVYGSLGKTGRFTE-ETPLAPNSPYSSSKASADMIALAYYKTYQLPVIVT 175
Query: 268 RFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDT 327
R YGP+ P+ N L+GK + +Y +V RD+ ++ D C ++D
Sbjct: 176 RCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNV---RDWLHVTD---HC-SAIDV 228
Query: 328 SAGPAPY-RIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHA-NISSA 385
++N+G + T ++V + L K KK++ + +A N
Sbjct: 229 VLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLG-KTKKDIEYVTDRLGHDRRYAINAEKM 287
Query: 386 QKEFGYRPTTDLQTGLKKFVRWY 408
+ EF + P + GL++ V+WY
Sbjct: 288 KNEFDWEPKYTFEQGLQETVQWY 310
>TIGR_CMR|DET_0204 [details] [associations]
symbol:DET_0204 "NAD-dependent epimerase/dehydratase
family protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016491 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0044237
GO:GO:0055114 KO:K01784 HOGENOM:HOG000167994 RefSeq:YP_180952.1
ProteinModelPortal:Q3Z9Z7 STRING:Q3Z9Z7 GeneID:3230493
KEGG:det:DET0204 PATRIC:21607483 OMA:NTLATHN ProtClustDB:CLSK837597
BioCyc:DETH243164:GJNF-204-MONOMER Uniprot:Q3Z9Z7
Length = 312
Score = 252 (93.8 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 92/310 (29%), Positives = 140/310 (45%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
VLVTG GF+G+H+ AL +G V +DN +N +LK ++ L +I G++
Sbjct: 4 VLVTGGCGFIGSHLVDALLSQGFKVRVMDNLSNGSLENLKCGQRDKLE-----IINGNLT 58
Query: 153 DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
D LL V HLAA A V+ + ++ + +N LLEA + N +
Sbjct: 59 DKFLLDSAVKGCET--VFHLAAHANVQNSAKDTGIDLENNTLATHNLLEAMRR-NRVDRL 115
Query: 213 VWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTV 272
V+ASS++VYG + E P SLY A+K AGE + Y+H+YGL T RF +
Sbjct: 116 VFASSAAVYGESGLTVLDEDYGPLLPISLYGASKLAGEGLISAYSHLYGLKATMFRFANI 175
Query: 273 YGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTSAGPA 332
G + Y F + Q + G ++ + ++ D V G L + S
Sbjct: 176 VGSRRHSGVIY-DFVSRLRQNPSSLLVLGDG--SQSKPYLHVSDCVAGMLLGFEKST--K 230
Query: 333 PYRIFNLGNTSPVTVPKLVNIL--ERHLK-VKAKKNVIEMPGNGDVPFTHANISSAQKEF 389
++NLG V V + ++ E LK V + E GD P +IS +
Sbjct: 231 NLGLYNLGTPDSVAVRDIACLVASEMGLKNVCYSYSGGERGWQGDAPQVRFDISRI-RTL 289
Query: 390 GYRPT-TDLQ 398
G++P T LQ
Sbjct: 290 GFKPKFTSLQ 299
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 258 (95.9 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 86/323 (26%), Positives = 142/323 (43%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDG--VVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
VLVTG AGF+ +H+ ++L + ++ LD + Y SLK + + N I+GD
Sbjct: 20 VLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLD--YCASLKNL-ETISNKQNYKFIQGD 76
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I D+ + LF+ V+H AAQ V + + + N+ G L+ A A +
Sbjct: 77 ICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVE- 135
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFF 270
++ S+ VYG + + F E+ QP + YA++K A E +Y Y + R
Sbjct: 136 KFIYVSTDEVYGGSLDKEFDESS-PKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSS 194
Query: 271 TVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTSAG 330
VYGP P+ F ++LQ G R+F Y D+V+ L L
Sbjct: 195 NVYGPHQYPEKVIPKFI-SLLQHNRKCCIHGTGLQ--TRNFLYATDVVEAFLTVLKKGK- 250
Query: 331 PAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIE--MPGNGDVPFTHANISSAQKE 388
P I+N+G ++V +L L + +K ++ +E + D P ++
Sbjct: 251 --PGEIYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPMKSEK 308
Query: 389 F---GYRPTTDLQTGLKKFVRWY 408
G+RP + G+KK + WY
Sbjct: 309 IHGLGWRPKVPWKEGIKKTIEWY 331
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 258 (95.9 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 88/323 (27%), Positives = 143/323 (44%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDG--VVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
VLVTG AGF+ +HV ++L + ++ LD + Y SLK + + N I+GD
Sbjct: 20 VLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLD--YCASLKNL-EPVSNKQNYKFIQGD 76
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I D+ + +LF++ V+H AAQ V + + + N+ G L+ A +
Sbjct: 77 ICDSHFVKRLFESEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNTAYEARVE- 135
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFF 270
++ S+ VYG + + F E+ QP + YA++K A E +Y Y + R
Sbjct: 136 KFIYVSTDEVYGGSLDQEFDESS-PKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSS 194
Query: 271 TVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTSAG 330
VYGP P+ F ++LQ G R+F Y D+V+ L L T
Sbjct: 195 NVYGPHQYPEKVIPKFI-SLLQHDRKCCIHGSGLQ--RRNFLYAADVVEAFLTVL-TKGE 250
Query: 331 PAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIE--MPGNGDVPFTHANIS-SAQK 387
P I+N+G ++V +L L + +K + E + D P ++K
Sbjct: 251 PG--EIYNIGTNFEMSVVQLAKELIQLIKETNSDSETERWVDYVSDRPHNDMRYPMKSEK 308
Query: 388 --EFGYRPTTDLQTGLKKFVRWY 408
G++P + G+KK V WY
Sbjct: 309 IHSLGWKPKVPWEEGIKKTVEWY 331
>TIGR_CMR|CJE_1287 [details] [associations]
symbol:CJE_1287 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 GO:GO:0005975 GO:GO:0050661 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0097171 HOGENOM:HOG000167987
KO:K03274 GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
RefSeq:YP_179275.1 ProteinModelPortal:Q5HTW0 STRING:Q5HTW0
GeneID:3231794 KEGG:cjr:CJE1287 PATRIC:20044370 OMA:GSYQFHT
ProtClustDB:CLSK871664 BioCyc:CJEJ195099:GJC0-1313-MONOMER
Uniprot:Q5HTW0
Length = 317
Score = 251 (93.4 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 88/325 (27%), Positives = 156/325 (48%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNN---YYDPSLKKAR--KALLNNHGVF 145
M V +TG AGF+G+ ++L L+++ + ++ +D + + + +L+ K LL G
Sbjct: 1 MRVAITGGAGFIGSQLALNLQEKHEILI-IDKMRSSATFENGNLQSFGHFKNLLEFDGE- 58
Query: 146 VIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKS 205
+ GDIND K+L K+ D + H AA + Q + +N+ +E
Sbjct: 59 LFAGDINDEKVLKKIEDFKPEI-IFHQAAISDTTVFDQT--KVLQTNLNTFKDFIELSID 115
Query: 206 ANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLS-I 264
N + +++ASS+SVYG + P + ++P + YA +K +++A Y Y + +
Sbjct: 116 LNAK--LIYASSASVYG-DAKSP-QTVGKDEEPKNPYAFSKLMMDKLAKKY---YDKAHL 168
Query: 265 TGLRFFTVYGPW----GRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKG 320
GLR+F VYG + F IL GK ++ G + + RDFTYI D++
Sbjct: 169 VGLRYFNVYGKGEFYKNKTASMVLQFGHQILAGKNPRLFEGSDQI--YRDFTYIKDVINA 226
Query: 321 CLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHA 380
L +LD+ G ++N+G+ T +V+IL++ LK I P F H
Sbjct: 227 NLIALDSKCG-----VYNVGSGKARTFQDIVDILQKELKTDLPCEYIPNPYVKSYQF-HT 280
Query: 381 NISSAQKEFGYRPTTDLQTGLKKFV 405
+ + + Y+P L+ G+K ++
Sbjct: 281 E-AKLDQTWDYQPKFSLEEGIKDYL 304
>UNIPROTKB|B0RVL0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:509169
"Xanthomonas campestris pv. campestris str. B100" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AM920689 GenomeReviews:AM920689_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:AF204145
RefSeq:YP_001905139.1 ProteinModelPortal:B0RVL0 SMR:B0RVL0
STRING:B0RVL0 GeneID:6324993 KEGG:xca:xccb100_3734 PATRIC:24087420
OMA:GFIASHM ProtClustDB:CLSK445958 Uniprot:B0RVL0
Length = 351
Score = 255 (94.8 bits), Expect = 7.9e-21, P = 7.9e-21
Identities = 90/341 (26%), Positives = 150/341 (43%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIND 153
LVTG AGF+G + L RG VV LD Y +L N +FV +GDI D
Sbjct: 5 LVTGGAGFIGGNFVLEAVSRGIRVVNLDALT--YAGNLNTLASLEGNADHIFV-KGDIGD 61
Query: 154 AKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKS---ANPQP 210
L+ +L V++ AA++ V +++ P +++ +N+ G + LLEA + A P
Sbjct: 62 GALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDT 121
Query: 211 S-----IVWASSSSVYG-LNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSI 264
+ S+ VYG L E F+E P S Y+A+K A + + ++H YGL +
Sbjct: 122 RRDAFRFLHVSTDEVYGTLGETGKFTETTPY-APNSPYSASKAASDHLVRAFHHTYGLPV 180
Query: 265 TGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGS 324
YGP+ P+ L G+P+ VY V RD+ ++ D +
Sbjct: 181 LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQV---RDWLFVSDHCEAIRTV 237
Query: 325 LDTSAGPAPYRIFNLGNTSPVTVPKLV-NILERHLKV---KAKKN----VIEMPGNGDVP 376
L Y + + V + + +L++H K +++ V + PG+ D
Sbjct: 238 LAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGH-DRR 296
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYYGYNRG 417
+ + S + E G+ P + G+ V WYL+ + +G
Sbjct: 297 YA-IDASKLKDELGWEPAYTFEQGIALTVDWYLTNQTWVQG 336
>UNIPROTKB|P44914 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase" species:71421
"Haemophilus influenzae Rd KW20" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 PIR:C64099 RefSeq:NP_439034.2
ProteinModelPortal:P44914 SMR:P44914 GeneID:949510 KEGG:hin:HI0873
PATRIC:20190401 OMA:AKKAFRF ProtClustDB:CLSK824762 Uniprot:P44914
Length = 338
Score = 248 (92.4 bits), Expect = 9.8e-21, P = 9.8e-21
Identities = 89/343 (25%), Positives = 154/343 (44%)
Query: 91 MSVLVTGAAGFVGTH-VSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
M++LVTG +GF+G+ + + D V+ +D Y + R+ + N+ +V E
Sbjct: 2 MNILVTGGSGFIGSALIRYIINHTQDFVINIDKLT--YAANQSALRE--VENNPRYVFEK 57
Query: 150 -DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKS--- 205
DI D ++ +F+ VMHLAA++ V ++ +V +NI G TLLE K+
Sbjct: 58 VDICDLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWH 117
Query: 206 -ANPQPSIVWA----SSSSVYGLNENVPFSEADRTDQ----PASLYAATKKAGEEIAHTY 256
+ + S+ VYG ++ SE T+Q P+S Y+A+K A + +
Sbjct: 118 TLDEAKKTTFRFHHISTDEVYG---DLSLSEPAFTEQSPYHPSSPYSASKAASNHLVQAW 174
Query: 257 NHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDD 316
+ YGL + YG + + N + GKP+ +Y + RD+ +++D
Sbjct: 175 HRTYGLPVIITNSSNNYGAYQHAEKLIPLMISNAVMGKPLPIYGDGQQI---RDWLFVED 231
Query: 317 IVKGCLGSLDTSAGPAPYRIF-NLGNTSPVTVPKLVNILER-------HLKV--KAKKNV 366
V+ L Y I N T+ V ++ +LE H+K V
Sbjct: 232 HVQASYLVLTKGRVGENYNIGGNCEKTNLEVVKRICQLLEELAPSKPNHIKYYEDLMTFV 291
Query: 367 IEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYL 409
+ PG+ DV ++ + S E G++P + GL++ V+WYL
Sbjct: 292 KDRPGH-DVRYS-LDCSKIHAELGWQPQITFEQGLRQTVKWYL 332
>TAIR|locus:2099372 [details] [associations]
symbol:RHM3 "rhamnose biosynthesis 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=ISS;IDA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005913 Pfam:PF01370 Pfam:PF04321
InterPro:IPR016040 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016829 EMBL:AP002061 GO:GO:0008831
GO:GO:0045226 HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260
GO:GO:0010280 GO:GO:0010253 eggNOG:COG1088 EMBL:AY078958
EMBL:AY142060 IPI:IPI00525100 RefSeq:NP_188097.1 UniGene:At.27812
ProteinModelPortal:Q9LH76 SMR:Q9LH76 IntAct:Q9LH76 STRING:Q9LH76
PaxDb:Q9LH76 PRIDE:Q9LH76 EnsemblPlants:AT3G14790.1 GeneID:820707
KEGG:ath:AT3G14790 TAIR:At3g14790 InParanoid:Q9LH76 OMA:TARMNNI
PhylomeDB:Q9LH76 Genevestigator:Q9LH76 GermOnline:AT3G14790
Uniprot:Q9LH76
Length = 664
Score = 269 (99.8 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 88/324 (27%), Positives = 145/324 (44%)
Query: 92 SVLVTGAAGFVGTHVSLAL-KKRGD-GVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
++L+TGAAGF+ +HV+ L + D +V LD + Y +LK + + + FV +G
Sbjct: 8 NILITGAAGFIASHVANRLVRSYPDYKIVVLDKLD--YCSNLKNLNPSKSSPNFKFV-KG 64
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
DI A L+ L +MH AAQ V + N + +NI G LLEACK
Sbjct: 65 DIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
Query: 210 PSIVWASSSSVYG-LNENVPFSEADRTDQ-PASLYAATKKAGEEIAHTYNHIYGLSITGL 267
+ S+ VYG +E+ + + P + Y+ATK E + Y YGL +
Sbjct: 125 RRFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
Query: 268 RFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDT 327
R VYGP P+ F + GKP+ ++ ++V R + Y +D+ + +
Sbjct: 185 RGNNVYGPNQFPEKLIPKFILLAMNGKPLPIHGDGSNV---RSYLYCEDVAEAF--EVVL 239
Query: 328 SAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNV--IE-MPGNGDVPFTHANISS 384
G + ++N+G T V + N + + + + +E P N F
Sbjct: 240 HKGEVNH-VYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLD---DQ 295
Query: 385 AQKEFGYRPTTDLQTGLKKFVRWY 408
K+ G+ T+ + GL+K + WY
Sbjct: 296 KLKKLGWCERTNWEEGLRKTMEWY 319
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 247 (92.0 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 80/327 (24%), Positives = 151/327 (46%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDG-VVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
M +LVTG AGF+G+ + K D ++ +D Y L++ + + +
Sbjct: 1 MKILVTGGAGFIGS--AFVRKYAYDHELIIVDKLT--YAGDLRRIEEV---RDRIKFYKA 53
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
D+ D + ++FD V+H AA++ V ++Q+P ++ +N+ G +L+A + +
Sbjct: 54 DVADKTAIEEIFDKEKPEAVVHFAAESHVDRSIQDPTPFIETNVKGTQVMLDASRKYGIE 113
Query: 210 PSIVWASSSSVYG-LNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
V S+ VYG L + F+E +P S Y+ +K A + +A Y+ YGL + R
Sbjct: 114 -KFVHISTDEVYGELGKEGQFTEESPL-RPNSPYSVSKAAADMLARAYHRTYGLPVIVAR 171
Query: 269 FFTVYGPWGRPDMAYFSFTRNILQGKPITVY-RGKNHVDLARDFTYIDDIVKGCLGSLDT 327
YGPW P+ + L +PI VY +G N R++ Y+DD ++ L
Sbjct: 172 PCNNYGPWQYPEKLIPVVIKKALNNEPIPVYGQGLN----VREWLYVDDCIEAVYLLLQK 227
Query: 328 SAGPAPYRIFNLGNTSPVTVPKLVNILERHL-KVKAKKNVIE-MPGNGDVPFTHANISSA 385
P +N+G+ ++V + R L K ++ +E PG+ D ++ N
Sbjct: 228 GK---PGEAYNIGSGEEKGNIEVVKEILRILGKPESLITFVEDRPGH-DFRYS-LNSKKI 282
Query: 386 QKEFGYRPTTDLQTGLKKFVRWYLSYY 412
+ + ++ + G++ + WY ++
Sbjct: 283 KMNYAWKHKVNFNEGIRFVIDWYKKHF 309
>TIGR_CMR|GSU_2366 [details] [associations]
symbol:GSU_2366 "dTDP-glucose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 HSSP:P26391 OMA:IQYVKDR RefSeq:NP_953413.1
ProteinModelPortal:Q74AI8 SMR:Q74AI8 GeneID:2686639
KEGG:gsu:GSU2366 PATRIC:22027581 ProtClustDB:CLSK828808
BioCyc:GSUL243231:GH27-2368-MONOMER Uniprot:Q74AI8
Length = 358
Score = 255 (94.8 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 97/342 (28%), Positives = 158/342 (46%)
Query: 92 SVLVTGAAGFVGTH-VSLALKKR-GDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
+VLVTG AGF+G++ ++ L G V+ LD Y +L+ A+ N ++G
Sbjct: 9 AVLVTGGAGFIGSNFINHFLPANPGCRVINLDILT--YAGNLRNLT-AVEQNPAYRFVKG 65
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACK----- 204
DI DA L+ ++ V+H AA++ V ++ P +V +N+ G LLE +
Sbjct: 66 DIGDADLVRRILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESRRHWES 125
Query: 205 SANPQPSIVWASSSSVYG-LNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLS 263
A + + S+ VYG L E F+E + P S Y+A+K + + YN +GL
Sbjct: 126 GAIERFRFLHVSTDEVYGTLGETGYFTE-ETPLAPNSPYSASKAGSDLLVRAYNETFGLP 184
Query: 264 ITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYR-GKNHVDLARDFTYIDDIVKGCL 322
+ R YGP+ P+ NI+ GKP+ VY G+N RD+ ++ D
Sbjct: 185 VLTTRCSNNYGPFQFPEKLIPLMIHNIVAGKPLPVYGDGRN----VRDWLHVKDHST--- 237
Query: 323 GSLDTSA-GPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGN---GDVPFT 378
+++T G P +FN+G + + NI HL + PG G + F
Sbjct: 238 -AIETVLKGGKPGEVFNVGGNN-----EWFNIDIVHLLCDLLDERLGRPGGESRGLITFV 291
Query: 379 -----HAN---ISSAQ--KEFGYRPTTDLQTGLKKFVRWYLS 410
H IS+A+ +E G+ P+ + G+ + V WYL+
Sbjct: 292 KDRLGHDRRYAISAAKIKRELGWEPSYTFERGIAETVDWYLA 333
>UNIPROTKB|P29782 [details] [associations]
symbol:strE "dTDP-glucose 4,6-dehydratase" species:1911
"Streptomyces griseus" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0019872 "streptomycin biosynthetic
process" evidence=IGI] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00066
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0019872 GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 PANTHER:PTHR10366:SF41 EMBL:X62567 PIR:S18617
ProteinModelPortal:P29782 SMR:P29782 Uniprot:P29782
Length = 328
Score = 244 (91.0 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 93/322 (28%), Positives = 155/322 (48%)
Query: 93 VLVTGAAGFVGT-HVSLALKKRG--DGVV-GLDNFNNYYDPSLKKARKALLNNHGVFVIE 148
+LVTGAAGF+G+ +V L G D VV LD +P A + H + E
Sbjct: 5 LLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPD----NLAAVRGHPRYRFE 60
Query: 149 -GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSAN 207
GDI DA + V+HLAA++ V ++ + +V +N+ G TLL+A + +
Sbjct: 61 RGDICDAPGRRVM---AGQDQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAA-TRH 116
Query: 208 PQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGL 267
S V S+ VYG E+ ++E D +P S Y+A+K +G+ +A ++ +GL +
Sbjct: 117 GVASFVQVSTDEVYGSLEHGSWTE-DEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVT 175
Query: 268 RFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDT 327
R YGP P+ F ++ G + +Y +V R++ ++DD V+G + ++ T
Sbjct: 176 RCSNNYGPRQFPEKLIPRFITLLMDGHRVPLYGDGLNV---REWLHVDDHVRG-IEAVRT 231
Query: 328 SAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVK-AKKNVIEMPGNGDVPFTHANISSAQ 386
G A R++N+G + ++ +LV +L +E D + + + Q
Sbjct: 232 R-GRAG-RVYNIGGGATLSNKELVGLLLEAAGADWGSVEYVEDRKGHDRRYA-VDSTRIQ 288
Query: 387 KEFGYRPTTDLQTGLKKFVRWY 408
+E G+ P DL GL V WY
Sbjct: 289 RELGFAPAVDLADGLAATVAWY 310
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 252 (93.8 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 85/323 (26%), Positives = 142/323 (43%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDG--VVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
+LVTG AGF+ +HV ++L + ++ LD + Y SLK + + N I+GD
Sbjct: 20 LLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLD--YCASLKNL-ETISNKQNYKFIQGD 76
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I ++ + LF+ V+H AAQ V + + + N+ G L+ A A +
Sbjct: 77 ICNSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVE- 135
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFF 270
++ S+ VYG + + F E+ QP + YA++K A E +Y Y R
Sbjct: 136 KFIYVSTDEVYGGSLDKEFDESS-PKQPTNPYASSKAAAECFVQSYWERYKFPAVITRSS 194
Query: 271 TVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTSAG 330
VYGP P+ F ++LQ G R+F Y D+V+ L L
Sbjct: 195 NVYGPHQYPEKVIPKFI-SLLQHNRKCCIHGSGLQ--TRNFLYATDVVEAFLTVLKKGK- 250
Query: 331 PAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIE--MPGNGDVPFTHANISSAQKE 388
P I+N+G ++V +L L + +K + ++ +E + D P ++
Sbjct: 251 --PGEIYNIGTNFEMSVLQLAKELIQLIKETSSESEMETWVDYVNDRPTNDMRYPMKSEK 308
Query: 389 F---GYRPTTDLQTGLKKFVRWY 408
G+RP + G+KK + WY
Sbjct: 309 IQGLGWRPKVPWKEGIKKTIDWY 331
>UNIPROTKB|F1NWE5 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GO:GO:0019388
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AADN02043722
EMBL:AADN02043721 IPI:IPI00604262 Ensembl:ENSGALT00000006441
Uniprot:F1NWE5
Length = 351
Score = 250 (93.1 bits), Expect = 7.0e-20, P = 7.0e-20
Identities = 94/348 (27%), Positives = 161/348 (46%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYY-DP-SLKKA--RKALLNNHGVFVIE 148
+LVTG AG++G+H L L + G V +DN N P +L ++ R + + E
Sbjct: 9 ILVTGGAGYIGSHCVLQLAEAGYEPVVIDNLRNAARGPGALPESLQRVQRIAQTPIAFQE 68
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
DI D L KLF F+ VMH A V +++ P Y + N+ G + LLEA ++ +
Sbjct: 69 LDITDGAALRKLFSTHRFSGVMHFAGLKAVGESVRRPLEYYNVNLTGTIRLLEAMEAYSV 128
Query: 209 QPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEE-IAHTYNHIYGLSITGL 267
+ +IV++SS++VYG + +P E + Y +K EE I G + L
Sbjct: 129 R-NIVFSSSATVYGDPQYLPLDEKHPVGGCTNPYGKSKYFIEEMIQDLCKAEKGWNAILL 187
Query: 268 RFFTVYG----------PWGRPDMAYFSFTRNILQGKP--ITVYRGKNHVDL----ARDF 311
R+F G P G P+ + + G+ ++V+ G ++ RD+
Sbjct: 188 RYFNPIGAHESGMIGEDPQGIPNNL-MPYVAQVAVGRQEFLSVF-GNDYETADGTGIRDY 245
Query: 312 TYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPG 371
++ D+ KG + +L +I+NLG + +V ++V +E K ++ ++ G
Sbjct: 246 IHVVDLAKGHIAALKKLKENCGCKIYNLGTGTGYSVLQMVQAME---KASGREIKYKITG 302
Query: 372 N--GDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSY-YGYNR 416
GDV +AN A++E G++ L + RW L GY++
Sbjct: 303 RREGDVAACYANPELAERELGWKAAFGLDKMCEDLWRWQLQNPTGYSK 350
>TAIR|locus:2163401 [details] [associations]
symbol:DUR "DEFECTIVE UGE IN ROOT" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580 GO:GO:0045227
eggNOG:COG1087 HOGENOM:HOG000168001 KO:K12448
ProtClustDB:CLSN2686084 GO:GO:0050373 GO:GO:0003978 GO:GO:0006012
GO:GO:0033358 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AB017065 IPI:IPI00546765
RefSeq:NP_199261.1 UniGene:At.55356 ProteinModelPortal:Q9FI17
SMR:Q9FI17 STRING:Q9FI17 PaxDb:Q9FI17 PRIDE:Q9FI17
EnsemblPlants:AT5G44480.1 GeneID:834475 KEGG:ath:AT5G44480
TAIR:At5g44480 InParanoid:Q9FI17 OMA:VRWGPLE PhylomeDB:Q9FI17
Genevestigator:Q9FI17 GermOnline:AT5G44480 Uniprot:Q9FI17
Length = 436
Score = 255 (94.8 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 93/356 (26%), Positives = 166/356 (46%)
Query: 82 SAQIHRSGGMS-VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLN 140
SA R G++ VLVTG AG++G+H +L L + V +DN + ++K ++
Sbjct: 85 SAFSQREEGVTHVLVTGGAGYIGSHAALRLLRDSYRVTIVDNLSRGNLGAVKTLQQLFPQ 144
Query: 141 NHGVFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLL 200
+ I D+ D + K+F AF VMH AA A V + P Y H+ + + +L
Sbjct: 145 TGRLQFIYADLGDPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVL 204
Query: 201 EACKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIY 260
EA + + ++++S+ + YG E +P +E D P + Y KK E++ ++
Sbjct: 205 EAM-ARHKVKKLIYSSTCATYGEPEKMPITE-DTPQVPINPYGKAKKMAEDMILDFSKNS 262
Query: 261 GLSITGLRFFTVYG--PWGR------PDM--------AYFSFTRNILQGKPI--TVYRGK 302
+++ LR+F V G P GR P++ A F R + G + T Y+
Sbjct: 263 DMAVMILRYFNVIGSDPGGRLGEAPRPELREQGRISGACFDAARGFIPGLQVKGTDYKTS 322
Query: 303 NHVDLARDFTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKA 362
+ + RD+ + D+V + +L+ A P I+N+G +V + V ++ V+
Sbjct: 323 DGTCI-RDYIDVTDLVDAHVKALE-KAQPRKVGIYNVGTGKGRSVKEFVEACKKATGVEI 380
Query: 363 KKNVI-EMPGNGDVPFTHANISSAQKEFGYRPT-TDLQTGLKKFVRWYLSY-YGYN 415
K + + PG D +++ + K+ + T+LQ L+ RW + +GYN
Sbjct: 381 KVDFLPRRPG--DYAEVYSDPTKILKDLNWTARFTNLQDSLQVAWRWQKIHPHGYN 434
>TIGR_CMR|GSU_1815 [details] [associations]
symbol:GSU_1815 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 KO:K01710
HOGENOM:HOG000168004 OMA:LGHENFE RefSeq:NP_952865.1
ProteinModelPortal:Q74C60 GeneID:2686299 KEGG:gsu:GSU1815
PATRIC:22026487 ProtClustDB:CLSK828578
BioCyc:GSUL243231:GH27-1866-MONOMER Uniprot:Q74C60
Length = 311
Score = 234 (87.4 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 93/328 (28%), Positives = 145/328 (44%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M +LVTG AGF+G+H+ L ++G V+ LDNF + S K+ L++ H VI D
Sbjct: 1 MRILVTGGAGFIGSHLCERLLEQGHDVLCLDNF---FTGS-KRNIDRLMDFHRFEVIRHD 56
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I + LL + +LA A + NP + +++ G + +L K +
Sbjct: 57 IIEPILLE-------VDRIYNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRVRAR- 108
Query: 211 SIVWASSSSVYGLNENVPFSEADRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSITG 266
I+ AS+S VYG P E+ + P S Y K+ E + Y+ G+ I
Sbjct: 109 -ILQASTSEVYGDPTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRI 167
Query: 267 LRFFTVYGP-WGRPDMAYFS-FTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGS 324
R F YGP D S F L+G+ +TVY + R F Y+DD++ G +
Sbjct: 168 ARIFNTYGPRMAEHDGRVVSNFVVQALRGEDLTVYGDGSQT---RSFCYVDDLLDGLVTL 224
Query: 325 L--DTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKN-VIEMPGNGDVPFTHA- 380
+ D GP NLGN P P ++ R + + + +I P D P
Sbjct: 225 MEHDQFCGPV-----NLGN--PEETP-IIEFARRIIAMTGSSSQIIYRPLPSDDPRQRQP 276
Query: 381 NISSAQKEFGYRPTTDLQTGLKKFVRWY 408
+I+ A+ G+ P L GL K + ++
Sbjct: 277 DITLARTILGWEPRVSLDEGLAKTIEYF 304
>ZFIN|ZDB-GENE-030131-5718 [details] [associations]
symbol:tgds "TDP-glucose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-030131-5718 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0008460 PANTHER:PTHR10366:SF41
HOVERGEN:HBG007741 HSSP:P26391 EMBL:BC066615 IPI:IPI00496965
UniGene:Dr.80538 ProteinModelPortal:Q6NYF5 Uniprot:Q6NYF5
Length = 347
Score = 243 (90.6 bits), Expect = 6.1e-19, P = 6.1e-19
Identities = 85/324 (26%), Positives = 143/324 (44%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGDG--VVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
+VLVTG AGF+G+H+ AL R ++ +DN Y +LK R ++ F I G
Sbjct: 8 TVLVTGGAGFIGSHLICALAGRFPHWRIINVDNLQ--YCSNLKNLRSVQASSSYSF-IPG 64
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
D+ D + LF V H AA+ V + P ++ N+ G L+ A A+ Q
Sbjct: 65 DVCDPLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRASLEASVQ 124
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTY--NHIYGLSITGL 267
++ S+ VYG + + PF E +P + Y+ +K A E I +Y H + IT
Sbjct: 125 -RFIYISTDEVYGDSVDQPFDELS-PKRPTNPYSRSKAAAESIVTSYWLKHKFPAVIT-- 180
Query: 268 RFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDT 327
R VYGP + F + Q + T+ +G +R F Y+ D+ L ++
Sbjct: 181 RSSNVYGPRQHHEKVIPRFLSLLQQQQKCTI-QGSGLQ--SRHFLYVSDVTDAFLTVMEK 237
Query: 328 SAGPAPYRIFNLGNTSPVT--VPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSA 385
Y I G P+ +LV + + + ++ + +E + V ++S
Sbjct: 238 GILGEIYNI-GTGFEIPIIQLARELVQMTVKSVSAESLDDWLEFVEDRPVTELRYPMNSV 296
Query: 386 Q-KEFGYRPTTDLQTGLKKFVRWY 408
+ G+RP G+++ V+WY
Sbjct: 297 KLHRLGWRPKVAWTEGIRRTVQWY 320
>UNIPROTKB|Q9KLH0 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 241 (89.9 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 92/327 (28%), Positives = 150/327 (45%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M VLVTG G++G+H + + + G V LDN N L + K ++ FV +GD
Sbjct: 1 MKVLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEK-VIGVRPQFV-QGD 58
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I D LL L V+H A V ++Q P Y +N+ G + L+ A + A +
Sbjct: 59 IRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVK- 117
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIY-GLSITGLRF 269
S+V++SS++VYG +VP +E+ T + A+ Y +K EE + SIT LR+
Sbjct: 118 SLVFSSSATVYGEPTSVPITESFPT-KAANPYGRSKLMVEECLTDFQKANPDWSITLLRY 176
Query: 270 FTVYG----------PWGRPDMAYFSFTRNILQGKP--ITVYRGKNHVDL----ARDFTY 313
F G P G P+ F + G+ ++V+ G ++ RD+ +
Sbjct: 177 FNPVGSHPSGELGEDPQGIPNNL-MPFVTQVAVGRREYLSVF-GSDYPTKDGTGVRDYIH 234
Query: 314 IDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHL-KVKAKKNVIEMPGN 372
+ D+ G + +L A I+NLG +V +V E + K V PG
Sbjct: 235 VMDLADGHIAALKKVGTCAGLHIYNLGTGKGYSVLDVVKAFETASGRTVPYKLVDRRPG- 293
Query: 373 GDVPFTHANISSAQKEFGYRPTTDLQT 399
D+ A+ + A ++ G++ T +L T
Sbjct: 294 -DIAEYWADPTKAAQDLGWKATRNLHT 319
>TIGR_CMR|VC_A0774 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 241 (89.9 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 92/327 (28%), Positives = 150/327 (45%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M VLVTG G++G+H + + + G V LDN N L + K ++ FV +GD
Sbjct: 1 MKVLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEK-VIGVRPQFV-QGD 58
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I D LL L V+H A V ++Q P Y +N+ G + L+ A + A +
Sbjct: 59 IRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVK- 117
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIY-GLSITGLRF 269
S+V++SS++VYG +VP +E+ T + A+ Y +K EE + SIT LR+
Sbjct: 118 SLVFSSSATVYGEPTSVPITESFPT-KAANPYGRSKLMVEECLTDFQKANPDWSITLLRY 176
Query: 270 FTVYG----------PWGRPDMAYFSFTRNILQGKP--ITVYRGKNHVDL----ARDFTY 313
F G P G P+ F + G+ ++V+ G ++ RD+ +
Sbjct: 177 FNPVGSHPSGELGEDPQGIPNNL-MPFVTQVAVGRREYLSVF-GSDYPTKDGTGVRDYIH 234
Query: 314 IDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHL-KVKAKKNVIEMPGN 372
+ D+ G + +L A I+NLG +V +V E + K V PG
Sbjct: 235 VMDLADGHIAALKKVGTCAGLHIYNLGTGKGYSVLDVVKAFETASGRTVPYKLVDRRPG- 293
Query: 373 GDVPFTHANISSAQKEFGYRPTTDLQT 399
D+ A+ + A ++ G++ T +L T
Sbjct: 294 -DIAEYWADPTKAAQDLGWKATRNLHT 319
>TAIR|locus:2014235 [details] [associations]
symbol:RHD1 "ROOT HAIR DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0010053 "root epidermal cell differentiation" evidence=IMP]
[GO:0009832 "plant-type cell wall biogenesis" evidence=TAS]
[GO:0009969 "xyloglucan biosynthetic process" evidence=IMP]
[GO:0010246 "rhamnogalacturonan I biosynthetic process"
evidence=IMP] [GO:0010306 "rhamnogalacturonan II biosynthetic
process" evidence=IMP] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005795 GO:GO:0009832 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GO:GO:0010053 EMBL:AC066689 GO:GO:0009969 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:BT011226 EMBL:BT012154 IPI:IPI00537209
RefSeq:NP_176625.1 UniGene:At.25758 ProteinModelPortal:Q9C7W7
SMR:Q9C7W7 STRING:Q9C7W7 PaxDb:Q9C7W7 PRIDE:Q9C7W7
EnsemblPlants:AT1G64440.1 GeneID:842752 KEGG:ath:AT1G64440
TAIR:At1g64440 InParanoid:Q9C7W7 OMA:HVAGYKY PhylomeDB:Q9C7W7
Genevestigator:Q9C7W7 Uniprot:Q9C7W7
Length = 348
Score = 242 (90.2 bits), Expect = 8.8e-19, P = 8.8e-19
Identities = 93/348 (26%), Positives = 161/348 (46%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHG--VFVIEG 149
++LVTG AG++G+H L L G V +DN +N S+++ K L +HG + V +
Sbjct: 4 NILVTGGAGYIGSHTVLQLLLGGYNTVVIDNLDNSSLVSIQRV-KDLAGDHGQNLTVHQV 62
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
D+ D L K+F F VMH A V ++ P Y ++N+ +TLLE +A+
Sbjct: 63 DLRDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVM-AAHGC 121
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNH-IYGLSITGLR 268
+V++SS++VYG + VP +E S Y TK E+I I LR
Sbjct: 122 KKLVFSSSATVYGWPKEVPCTEESPLSG-MSPYGRTKLFIEDICRDVQRGDPEWRIIMLR 180
Query: 269 FFTVYG----------PWGRPDMAYFSFTRNILQGK-P-ITVYRGKNHVDL----ARDFT 312
+F G P G P+ + + ++ G+ P + +Y G ++ RD+
Sbjct: 181 YFNPVGAHPSGRIGEDPCGTPNNL-MPYVQQVVVGRLPNLKIY-GTDYTTKDGTGVRDYI 238
Query: 313 YIDDIVKG--C-LGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERH--LKVKAKKNVI 367
++ D+ G C L LD + ++NLG TV ++V+ E+ +K+ K V
Sbjct: 239 HVVDLADGHICALQKLDDTE--IGCEVYNLGTGKGTTVLEMVDAFEKASGMKIPLVK-VG 295
Query: 368 EMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSY-YGY 414
PG+ + +A+ A++E ++ ++ + W + +GY
Sbjct: 296 RRPGDAET--VYASTEKAERELNWKANFGIEEMCRDQWNWASNNPFGY 341
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 252 (93.8 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 88/324 (27%), Positives = 144/324 (44%)
Query: 92 SVLVTGAAGFVGTHVSLAL-KKRGD-GVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
++L+TGAAGF+ +HV+ L + D +V LD + Y LK + + + FV +G
Sbjct: 10 NILITGAAGFIASHVANRLIRNYPDYKIVVLDKLD--YCSDLKNLDPSFSSPNFKFV-KG 66
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
DI L+ L +MH AAQ V + N + +NI G LLEACK
Sbjct: 67 DIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 126
Query: 210 PSIVWASSSSVYG-LNENVPFSEADRTDQ-PASLYAATKKAGEEIAHTYNHIYGLSITGL 267
+ S+ VYG +E+ + + P + Y+ATK E + Y YGL +
Sbjct: 127 RRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 186
Query: 268 RFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDT 327
R VYGP P+ F + GKP+ ++ ++V R + Y +D+ + +
Sbjct: 187 RGNNVYGPNQFPEKMIPKFILLAMSGKPLPIHGDGSNV---RSYLYCEDVAEAF--EVVL 241
Query: 328 SAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANI---SS 384
G + ++N+G V + + + L K ++ I+ N PF
Sbjct: 242 HKGEIGH-VYNVGTKRERRVIDVARDICK-LFGKDPESSIQFVENR--PFNDQRYFLDDQ 297
Query: 385 AQKEFGYRPTTDLQTGLKKFVRWY 408
K+ G++ T+ + GLKK + WY
Sbjct: 298 KLKKLGWQERTNWEDGLKKTMDWY 321
>TIGR_CMR|GSU_1975 [details] [associations]
symbol:GSU_1975 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
HSSP:P95780 ProtClustDB:CLSK864552 RefSeq:NP_953024.1
ProteinModelPortal:Q74BR6 GeneID:2685764 KEGG:gsu:GSU1975
PATRIC:22026813 OMA:AMKGCDV BioCyc:GSUL243231:GH27-1926-MONOMER
InterPro:IPR026390 TIGRFAMs:TIGR04180 Uniprot:Q74BR6
Length = 336
Score = 239 (89.2 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 86/331 (25%), Positives = 148/331 (44%)
Query: 90 GMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPS-LKKARKALLNNHGVFVIE 148
G +LVTGA GF+G+H++ AL RG +N++ L LL + VF
Sbjct: 5 GKKILVTGADGFIGSHLTEALLMRGYDTRAFVYYNSFNSWGWLDHLDPELLKSLDVFA-- 62
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
GDI D + + V+HLAA + Y+ +P +YV +N+ G + +++A +
Sbjct: 63 GDIRDPHGVREAMKGCDV--VLHLAALIAIPYSYHSPDTYVDTNVKGTLNVVQAARELGV 120
Query: 209 QPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
+V S+S VYG VP +E + Q S Y+A+K ++IA ++ + + +R
Sbjct: 121 A-KVVHTSTSEVYGTARFVPITE-EHPLQGQSPYSASKIGADQIAMSFYSSFDTPVAIIR 178
Query: 269 FFTVYGPWGRPDMAYFSFT--RNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLD 326
F YGP R F T I G T+ G H RD Y+ D V G + +
Sbjct: 179 PFNTYGP--RQSARAFIPTVITQIASGAR-TLRLGALHP--TRDLNYVADTVAGFIAVAE 233
Query: 327 TSAGPAPYRIFNLGNTSPV----TVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANI 382
+ + N+G+ + T + +++ +++ + P +V A+
Sbjct: 234 SEKSVG--EVINIGSNFEISMGETARMIADVMGADVEIVTDAERLR-PDKSEVERLWADT 290
Query: 383 SSAQK--EFG--YRPTTDLQTGLKKFVRWYL 409
S A++ + G Y L+ GL + V W++
Sbjct: 291 SKAKRLLDHGQNYGGKDGLRRGLVETVEWFV 321
>UNIPROTKB|A0QSK6 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:246196
"Mycobacterium smegmatis str. MC2 155" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IGI] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IGI]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:YP_006566244.1 RefSeq:YP_885894.1 ProteinModelPortal:A0QSK6
SMR:A0QSK6 STRING:A0QSK6 EnsemblBacteria:EBMYCT00000041385
GeneID:13429291 GeneID:4531259 KEGG:msg:MSMEI_1476
KEGG:msm:MSMEG_1512 PATRIC:18075481 OMA:AYNDARY
BioCyc:MSME246196:GJ4Y-1512-MONOMER Uniprot:A0QSK6
Length = 331
Score = 237 (88.5 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 92/326 (28%), Positives = 156/326 (47%)
Query: 91 MSVLVTGAAGFVGTH-VSLALKK-RGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIE 148
M +LVTG AGF+G + V LAL++ R + LD Y S +++ + + + +++
Sbjct: 1 MRLLVTGGAGFIGANFVHLALREARTSSITVLDALT--YAGS-RESLAPVADR--IRLVQ 55
Query: 149 GDINDAKLLAKLFDAVAFTH-VMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSAN 207
GDI DA L+ D VA + V+H AA+ V A+ +P ++HSN+ G T+LEA + N
Sbjct: 56 GDITDAALVG---DLVAESDAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEAVRRHN 112
Query: 208 PQPSIVWASSSSVYG---LNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSI 264
+ V S+ VYG L+ F+E + P+S Y++TK A + + + YG+
Sbjct: 113 VRLHHV--STDEVYGDLELDNPARFNETTPYN-PSSPYSSTKAAADLLVRAWVRSYGVRA 169
Query: 265 TGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGS 324
T YGP+ + N+L G+ +Y +V RD+ ++DD
Sbjct: 170 TISNCSNNYGPYQHVEKFIPRQITNVLTGRRPKLYGAGANV---RDWIHVDDHNSAVWRI 226
Query: 325 LDTSAGPAPYRIFNLGNTSPVTVPK-LVNILERHLKVKAKKNVIEMPGNGDVPFTHANIS 383
L Y I + +TV + ++ ++ R +V + G+ D+ + + S
Sbjct: 227 LTDGTIGRTYLIGAECERNNLTVMRTILKLMGRD--PDDFDHVTDRAGH-DLRYA-IDPS 282
Query: 384 SAQKEFGYRPT-TDLQTGLKKFVRWY 408
+ Q E G+ P TD + GL + WY
Sbjct: 283 TLQDELGWAPKHTDFEAGLTDTIDWY 308
>TAIR|locus:2202960 [details] [associations]
symbol:RHM1 "rhamnose biosynthesis 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA;IMP] [GO:0050377
"UDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=IDA] [GO:0010315 "auxin
efflux" evidence=IMP] [GO:0051555 "flavonol biosynthetic process"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009813 "flavonoid biosynthetic
process" evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010315 EMBL:AC007260
GO:GO:0051555 eggNOG:COG1091 GO:GO:0008831 GO:GO:0045226
EMBL:AY042833 EMBL:AY081471 IPI:IPI00543019 PIR:C96814
RefSeq:NP_177978.1 UniGene:At.198 UniGene:At.71030
ProteinModelPortal:Q9SYM5 SMR:Q9SYM5 IntAct:Q9SYM5 STRING:Q9SYM5
PaxDb:Q9SYM5 PRIDE:Q9SYM5 EnsemblPlants:AT1G78570.1 GeneID:844193
KEGG:ath:AT1G78570 TAIR:At1g78570 HOGENOM:HOG000167988
InParanoid:Q9SYM5 KO:K12450 OMA:IKFVDNR PhylomeDB:Q9SYM5
ProtClustDB:PLN02260 BioCyc:ARA:AT1G78570-MONOMER
BioCyc:MetaCyc:AT1G78570-MONOMER Genevestigator:Q9SYM5
GO:GO:0008460 GO:GO:0050377 GO:GO:0010280 GO:GO:0010253
TIGRFAMs:TIGR01181 Uniprot:Q9SYM5
Length = 669
Score = 249 (92.7 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 86/324 (26%), Positives = 140/324 (43%)
Query: 92 SVLVTGAAGFVGTHVSLAL-KKRGD-GVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
++L+TGAAGF+ +HV+ L + D +V LD + Y +LK + + + FV +G
Sbjct: 8 NILITGAAGFIASHVANRLIRSYPDYKIVVLDKLD--YCSNLKNLNPSKHSPNFKFV-KG 64
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
DI A L+ L +MH AAQ V + N + +NI G LLEACK
Sbjct: 65 DIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSITGL 267
+ S+ VYG + Q P + Y+ATK E + Y YGL +
Sbjct: 125 RRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
Query: 268 RFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDT 327
R VYGP P+ F ++G+ + ++ ++V R + Y +D+ + +
Sbjct: 185 RGNNVYGPNQFPEKLIPKFILLAMRGQVLPIHGDGSNV---RSYLYCEDVAEAF--EVVL 239
Query: 328 SAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANI---SS 384
G + ++N+G V + + + + + N I+ N PF
Sbjct: 240 HKGEVGH-VYNIGTKKERRVNDVAKDICKLFNMDPEAN-IKFVDNR--PFNDQRYFLDDQ 295
Query: 385 AQKEFGYRPTTDLQTGLKKFVRWY 408
K+ G+ T + GLKK + WY
Sbjct: 296 KLKKLGWSERTTWEEGLKKTMDWY 319
>ZFIN|ZDB-GENE-060421-6479 [details] [associations]
symbol:gale "UDP-galactose-4-epimerase"
species:7955 "Danio rerio" [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 ZFIN:ZDB-GENE-060421-6479 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GeneTree:ENSGT00530000063128
EMBL:CR391986 IPI:IPI00758807 Ensembl:ENSDART00000135569
ArrayExpress:F1Q5H4 Bgee:F1Q5H4 Uniprot:F1Q5H4
Length = 350
Score = 237 (88.5 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 91/342 (26%), Positives = 161/342 (47%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYY----D-P-SLKKARKALLNNHGVFV 146
+LVTG G++G+H + L + G V +DNF+N D P SL++ K + + +
Sbjct: 5 ILVTGGGGYIGSHCVVELIEAGFHPVVIDNFSNAVRGEGDVPESLRRIEKFM--DTQIEF 62
Query: 147 IEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSA 206
E D+ D L K+F +F VMH A V +++ P Y N+ G + LLE +S
Sbjct: 63 HELDLLDKPGLEKIFKMHSFYAVMHFAGLKAVGESVEQPLRYYRVNLTGTINLLEVMQSH 122
Query: 207 NPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAH---TYNHIYGLS 263
+ ++V++SS++VYG + +P E + Y TK EE+ T +
Sbjct: 123 GVR-NLVFSSSATVYGDPQKLPIDEQHPVGGCTNPYGKTKYFIEEMIRDQCTAEKDWNAV 181
Query: 264 ITGLRFFTVYG----------PWGRPDMAYFSFTRNILQG--KPITVYRGKNHVDL---- 307
+ LR+F G P G P+ + + G K + V+ G ++
Sbjct: 182 L--LRYFNPIGAHISGQIGEDPQGIPNNL-LPYVAQVAIGRRKHLNVF-GNDYSTPDGTG 237
Query: 308 ARDFTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVI 367
RD+ ++ D+ KG + ++ +++NLG + +V ++V+ +E K +K
Sbjct: 238 VRDYIHVVDLAKGHIAAVRKLKDSCGCKVYNLGTGTGYSVLQMVSAME---KASGRKIAY 294
Query: 368 EM-PG-NGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
++ P +GDV +A+ S A+KE G++ DL+ + RW
Sbjct: 295 QIAPRRSGDVASCYADASLAEKELGWKAEFDLERMCEDLWRW 336
>UNIPROTKB|P37777 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:623
"Shigella flexneri" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:X71970
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF EMBL:L14842 PIR:S41534
RefSeq:NP_707936.1 RefSeq:NP_837663.1 ProteinModelPortal:P37777
SMR:P37777 EnsemblBacteria:EBESCT00000086479
EnsemblBacteria:EBESCT00000092444 GeneID:1025931 GeneID:1078528
KEGG:sfl:SF2104 KEGG:sfx:S2227 PATRIC:18705961 Uniprot:P37777
Length = 361
Score = 152 (58.6 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 46/193 (23%), Positives = 84/193 (43%)
Query: 224 NENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAY 283
NE +P P+S Y+A+K + + + + YGL YGP+ P+
Sbjct: 149 NEALPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLI 208
Query: 284 FSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTS 343
N L+GK + +Y GK D RD+ Y++D + + Y I
Sbjct: 209 PLVILNALEGKALPIY-GKG--DQIRDWLYVEDHARALYTVVTEGKAGETYNIGGHNEKK 265
Query: 344 PVTVPKLV-NILERHL-KVKAKKN----VIEMPGNGDVPFTHANISSAQKEFGYRPTTDL 397
+ V + ++L+ + K K+ + V + PG+ D + + +E G++P
Sbjct: 266 NIDVVLTICDLLDEIVPKEKSYREQITYVADRPGH-DRRYA-IDADKISRELGWKPQETF 323
Query: 398 QTGLKKFVRWYLS 410
++G++K V WYL+
Sbjct: 324 ESGIRKTVEWYLA 336
Score = 134 (52.2 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 37/116 (31%), Positives = 59/116 (50%)
Query: 91 MSVLVTGAAGFVGTHVSL-ALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
M +LVTG AGF+G+ V + D VV +D Y +L+ + F
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLT--YAGNLESLADVSDSERYAFE-HA 57
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKS 205
DI DA ++++F VMHLAA++ V ++ P +++ +NI G LLEA ++
Sbjct: 58 DICDAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARN 113
>UNIPROTKB|Q9S642 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122587
"Neisseria meningitidis Z2491" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
OMA:RAYRQQM EMBL:AL157959 GenomeReviews:AL157959_GR GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
EMBL:AF083467 PIR:G82014 RefSeq:YP_002341735.1
RefSeq:YP_002341747.1 ProteinModelPortal:Q9S642 SMR:Q9S642
EnsemblBacteria:EBNEIT00000000158 EnsemblBacteria:EBNEIT00000001121
GeneID:906204 GeneID:906218 KEGG:nma:NMA0189 KEGG:nma:NMA0204
PATRIC:20360960 ProtClustDB:CLSK877380
BioCyc:NMEN122587:GI3Q-220-MONOMER
BioCyc:NMEN122587:GI3Q-233-MONOMER Uniprot:Q9S642
Length = 341
Score = 233 (87.1 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 90/349 (25%), Positives = 152/349 (43%)
Query: 93 VLVTGAAGFVGTHVSL-ALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDI 151
+LVTG AGF+G+ V ++ D VV LD Y +L+ N F + DI
Sbjct: 4 ILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLT--YAGNLESLTDIADNPRYAFE-QVDI 60
Query: 152 NDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ-P 210
D L ++F VMHLAA++ V ++ + ++ +NI G LLEA ++ Q P
Sbjct: 61 CDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQMP 120
Query: 211 S-------IVWASSSSVYG-LNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL 262
S S+ VYG L+ P+S Y+A+K + + + + YGL
Sbjct: 121 SEKHEAFRFHHISTDEVYGDLSGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGL 180
Query: 263 SITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCL 322
YGP+ P+ N L GKP+ VY + RD+ +++D +
Sbjct: 181 PTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQI---RDWLFVEDHARALY 237
Query: 323 GSLDTSAGPAPYRIFNLGNTSPVTVPKLVNIL------ERHLKVKAKKNVI----EMPGN 372
+ Y I + + V K + L E+ V +++I + PG+
Sbjct: 238 QVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGH 297
Query: 373 GDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYYGYNRGKRVN 421
D + + + +++ G++P ++GL+K V+WYL N+ +R N
Sbjct: 298 -DARYA-VDTAKIRRDLGWQPLETFESGLRKTVQWYLD----NKTRRQN 340
>UNIPROTKB|P27830 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase 2" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IDA] [GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;IDA] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;IDA] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 EMBL:M87049 OMA:RAYRQQM
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
eggNOG:COG1088 GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 PIR:G65182 RefSeq:YP_026255.1
RefSeq:YP_491651.1 PDB:1BXK PDBsum:1BXK ProteinModelPortal:P27830
SMR:P27830 PRIDE:P27830 EnsemblBacteria:EBESCT00000002573
EnsemblBacteria:EBESCT00000015511 GeneID:12933083 GeneID:948300
KEGG:ecj:Y75_p3387 KEGG:eco:b3788 PATRIC:32123069 EchoBASE:EB1422
EcoGene:EG11453 ProtClustDB:PRK10217
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT2-MONOMER
BioCyc:ECOL316407:JW5598-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT2-MONOMER EvolutionaryTrace:P27830
Genevestigator:P27830 Uniprot:P27830
Length = 355
Score = 234 (87.4 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 87/338 (25%), Positives = 147/338 (43%)
Query: 93 VLVTGAAGFVGTH-VSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDI 151
+L+TG AGF+G+ V + + D VV +D Y +L + F + DI
Sbjct: 4 ILITGGAGFIGSALVRYIINETSDAVVVVDKLT--YAGNLMSLAPVAQSERFAFE-KVDI 60
Query: 152 NDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKS-----A 206
D LA++F VMHLAA++ V ++ P +++ +NI G TLLEA ++
Sbjct: 61 CDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALT 120
Query: 207 NPQPSIV---WASSSSVYG-LNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL 262
+ S S+ VYG L+ F P+S Y+A+K + + + + YGL
Sbjct: 121 EDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGL 180
Query: 263 SITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCL 322
YGP+ P+ N L GK + VY + RD+ Y++D +
Sbjct: 181 PTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQI---RDWLYVEDHARALY 237
Query: 323 GSLDTSAGPAPYRIFNLGNTSPVTVPKLV-NILERHLKVKAK-----KNVI----EMPGN 372
T Y I + V + + +LE K +++I + PG+
Sbjct: 238 CVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGH 297
Query: 373 GDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLS 410
D+ + + S +E G+ P ++G++K V+WYL+
Sbjct: 298 -DLRYA-IDASKIARELGWLPQETFESGMRKTVQWYLA 333
>RGD|621493 [details] [associations]
symbol:Gale "UDP-galactose-4-epimerase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;ISO]
[GO:0006012 "galactose metabolic process" evidence=IEA;ISO]
[GO:0019388 "galactose catabolic process" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 HOVERGEN:HBG001396
OrthoDB:EOG4B5P5D EMBL:X53949 IPI:IPI00193573 PIR:S11223
UniGene:Rn.29908 ProteinModelPortal:P18645 SMR:P18645 STRING:P18645
PRIDE:P18645 InParanoid:P18645 ArrayExpress:P18645
Genevestigator:P18645 GermOnline:ENSRNOG00000009712 Uniprot:P18645
Length = 347
Score = 177 (67.4 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 50/142 (35%), Positives = 76/142 (53%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYY--DPSLKKARKAL--LNNHGVFVIE 148
VLVTG AG++G+H L L + G V +DNF+N + S+ ++ + + L V E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSVEFEE 64
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
DI D L LF F V+H A V ++Q P Y N+ G + LLE ++
Sbjct: 65 MDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAMGV 124
Query: 209 QPSIVWASSSSVYGLNENVPFS 230
+ S+V++SS++VYG + VP S
Sbjct: 125 K-SLVFSSSATVYG--KPVPAS 143
Score = 103 (41.3 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 28/99 (28%), Positives = 46/99 (46%)
Query: 309 RDFTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIE 368
RD+ ++ D+ KG + +L RI+NLG + +V ++V +E+ K V+
Sbjct: 238 RDYIHVVDLAKGHIAALKKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVA 297
Query: 369 MPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
GDV +AN S A +E G+ L + RW
Sbjct: 298 RR-EGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 335
>UNIPROTKB|P26391 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0070404 "NADH binding" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
Gene3D:3.40.50.720 EMBL:AE006468 EMBL:X56793
GenomeReviews:AE006468_GR GO:GO:0009103 GO:GO:0070404 GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF PIR:S15299 RefSeq:NP_461042.1
PDB:1G1A PDB:1KEU PDB:1KEW PDBsum:1G1A PDBsum:1KEU PDBsum:1KEW
ProteinModelPortal:P26391 SMR:P26391 PRIDE:P26391 GeneID:1253618
KEGG:stm:STM2097 PATRIC:32382777 EvolutionaryTrace:P26391
Uniprot:P26391
Length = 361
Score = 148 (57.2 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 47/182 (25%), Positives = 86/182 (47%)
Query: 238 PASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPIT 297
P+S Y+A+K + + + + YGL YGP+ P+ N L+GKP+
Sbjct: 163 PSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLP 222
Query: 298 VYRGKNHVDLARDFTYIDDIVKGCLGSLDTSAGPAPYRIFNLG------NTSPV-TVPKL 350
+Y GK D RD+ Y++D + + + G A +N+G N V T+ L
Sbjct: 223 IY-GKG--DQIRDWLYVEDHARAL--HMVVTEGKAG-ETYNIGGHNEKKNLDVVFTICDL 276
Query: 351 VN-ILERHLKVKAKKN-VIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWY 408
++ I+ + + + V + PG+ D + + +E G++P ++G++K V WY
Sbjct: 277 LDEIVPKATSYREQITYVADRPGH-DRRYA-IDAGKISRELGWKPLETFESGIRKTVEWY 334
Query: 409 LS 410
L+
Sbjct: 335 LA 336
Score = 136 (52.9 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 36/115 (31%), Positives = 59/115 (51%)
Query: 91 MSVLVTGAAGFVGTHVSL-ALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
M +L+TG AGF+G+ V +K D VV +D Y +L+ +N F
Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLT--YAGNLESLSDISESNRYNFE-HA 57
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACK 204
DI D+ + ++F+ VMHLAA++ V ++ P +++ +NI G LLE +
Sbjct: 58 DICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVAR 112
Score = 45 (20.9 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 78 HVRSSAQIHRSGGMSVLVTGAAGF-----VGTHVSLALKKRGDGVVGLDNFNNY 126
H+ + + + RS +TG A F VGT+ L + ++ +G D NN+
Sbjct: 79 HLAAESHVDRS------ITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNF 126
>WB|WBGene00005019 [details] [associations]
symbol:sqv-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060465 "pharynx development" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0018991 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0040025
GeneTree:ENSGT00530000063128 KO:K08678 GO:GO:0048040 EMBL:FO081016
EMBL:AY147933 PIR:T15892 RefSeq:NP_501418.1 UniGene:Cel.19768
ProteinModelPortal:G5EF65 SMR:G5EF65 EnsemblMetazoa:D2096.4.1
EnsemblMetazoa:D2096.4.2 GeneID:177631 KEGG:cel:CELE_D2096.4
CTD:177631 WormBase:D2096.4 OMA:FSEALIM NextBio:897688
Uniprot:G5EF65
Length = 467
Score = 238 (88.8 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 90/337 (26%), Positives = 145/337 (43%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
+L+TG AGFVG+H+ L G V+ LDN Y KK + + + ++ D+
Sbjct: 139 ILITGGAGFVGSHLVDKLMLDGHEVIALDN----YFTGRKKNVEHWIGHPNFEMVHHDV- 193
Query: 153 DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
+ F V + HLA+ A + M NP + +N G + +L K + ++
Sbjct: 194 ----VNPYF--VEVDQIYHLASPASPPHYMYNPVKTIKTNTLGTINMLGLAKRV--KATV 245
Query: 213 VWASSSSVYGLNENVPFSEAD----RTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
+ AS+S VYG E P E T P + Y K+ E + YN + I R
Sbjct: 246 LLASTSEVYGDPEVHPQPETYWGHVNTIGPRACYDEGKRVAESLMVAYNKQENIKIRIAR 305
Query: 269 FFTVYGP-WGRPDMAYFS-FTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLD 326
F +GP D S F LQ KPIT+Y R F Y+ D+V G + ++
Sbjct: 306 IFNTFGPRMHMNDGRVVSNFIIQALQDKPITIYGNGTQT---RSFQYVTDLVDGLIKLMN 362
Query: 327 TSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHA-NISSA 385
++ P N+GN T+ + I+ R L + ++ + D P +I A
Sbjct: 363 SNYS-LPV---NIGNPEEHTIGQFATII-RDLVPGSTSEIVNLESQQDDPQQRRPDIRRA 417
Query: 386 QKEFGYRPTTDLQTGLKKFVRWYLSYYGYNR--GKRV 420
++ + P ++ GL K V ++ + N+ GK V
Sbjct: 418 AEQISWAPQVHMKDGLLKTVDYFRAEIDRNKRGGKPV 454
>UNIPROTKB|Q9ZAE8 [details] [associations]
symbol:acbB "dTDP-glucose 4,6-dehydratase" species:134676
"Actinoplanes sp. SE50/110" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0045226 GO:GO:0008460 TIGRFAMs:TIGR01181
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:Y18523 EMBL:CP003170
RefSeq:YP_006266644.1 ProteinModelPortal:Q9ZAE8 SMR:Q9ZAE8
GeneID:12821023 KEGG:ase:ACPL_3681 Uniprot:Q9ZAE8
Length = 320
Score = 227 (85.0 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 90/327 (27%), Positives = 137/327 (41%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGD--------GVVGLDNFNNYYDPSLKKARKALLNNH 142
M +LVTG AGF+G+H +L GD V +D Y +L+ +A +
Sbjct: 1 MKILVTGGAGFIGSHFVTSLIS-GDIATPQPVTQVTVVDKLG--YGGNLRNLAEASADPR 57
Query: 143 GVFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEA 202
FV GDI D L+ L V H AA+ V ++ +V SN+ G LL+A
Sbjct: 58 FSFV-RGDICDEGLIEGLM--ARHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDA 114
Query: 203 CKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL 262
+ + S+ VYG + ++E P S YAA+K + +A Y+ +G+
Sbjct: 115 ALRHHIG-RFLHVSTDEVYGSIDTGSWAEGHPL-APNSPYAASKAGSDLLALAYHQTHGM 172
Query: 263 SITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYR-GKNHVDLARDFTYIDDIVKGC 321
+ R YGP P+ F +L G + VY G+N RD+ ++ D +G
Sbjct: 173 DVVVTRCSNNYGPRQFPEKMIPLFVTRLLDGLDVPVYGDGRN----IRDWLHVSDHCRGL 228
Query: 322 LGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHAN 381
+L AG A ++++G T +L IL A + G +
Sbjct: 229 --ALALGAGRAG-EVYHIGGGWEATNLELTEILLEACGAPASRISFVTDRKGHDRRYSLD 285
Query: 382 ISSAQKEFGYRPTTDLQTGLKKFVRWY 408
S E GYRP D G+ + V WY
Sbjct: 286 YSKIAGELGYRPRVDFTDGIAETVAWY 312
>UNIPROTKB|Q0C421 [details] [associations]
symbol:HNE_0794 "Putative GDP-6-deoxy-D-lyxo-4-hexulose
reductase" species:228405 "Hyphomonas neptunium ATCC 15444"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0003824 "catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:CP000158 GenomeReviews:CP000158_GR
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167992 OMA:NLLEACA
RefSeq:YP_759522.1 ProteinModelPortal:Q0C421 STRING:Q0C421
GeneID:4288576 KEGG:hne:HNE_0794 PATRIC:32214396
BioCyc:HNEP228405:GI69-836-MONOMER Uniprot:Q0C421
Length = 324
Score = 227 (85.0 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 86/311 (27%), Positives = 139/311 (44%)
Query: 90 GMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
G +L+TGA GFVG ++ L G + + ++ A ++L
Sbjct: 3 GRRILITGANGFVGGYMIRELVAAGY------QHSELHTLTVSGAEQSLRIGQAH---RC 53
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
D+ D+ + +L V T ++HLAA A A +P + N + L EA + +P
Sbjct: 54 DLRDSASIHRLLQEVQPTGIVHLAAIALPSQAKADPSAAWAVNFEAVRQLGEAVLACSPH 113
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTD--QPASLYAATKKAGEEIAHTYNHIYGLSITGL 267
+V+A SS YG + N + +P + YAATK A + +A GL+
Sbjct: 114 AVLVFAGSSESYGASFNTVAGAVNEGTALRPLTPYAATKAAAD-VALGQMRNDGLNAVRF 172
Query: 268 RFFTVYGPWGRPDMAYFSFTRNILQ---GKPITVYRGKNHVDLARDFTYIDDIVKGCLGS 324
R F GP PD SF I Q G V R N +D RDF + D+V+G +
Sbjct: 173 RAFNHTGPGQSPDYVVASFAAQIAQIIAGDHPPVIRVGN-LDAMRDFVDVRDVVRGYRLA 231
Query: 325 LDTSAGPAPYRIFNLGNTSPVTVPKLVNILE--RHLKVKAKKNVIEMPGNGDVPFTHANI 382
L+T P +FNL + +P ++ ++N L + + + + ++ N DVP T +
Sbjct: 232 LETELDPVSEGVFNLASGTPRSIRSILNTLIDIAGVDIAIETDPAKLRKN-DVPRTWGDA 290
Query: 383 SSAQKEFGYRP 393
+ A+ E G+ P
Sbjct: 291 NRARTELGWVP 301
>TAIR|locus:2081675 [details] [associations]
symbol:AUD1 "AT3G62830" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0042732 "D-xylose metabolic process"
evidence=IDA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IDA] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005886 EMBL:CP002686 GO:GO:0000139
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005768
EMBL:AL162651 GO:GO:0005802 GO:GO:0042732 GO:GO:0008460
GO:GO:0019305 GO:GO:0048040 OMA:FSEALIM UniGene:At.23561
UniGene:At.27002 UniGene:At.63633 EMBL:AY143897 IPI:IPI00539694
PIR:T48072 RefSeq:NP_001118893.1 RefSeq:NP_191842.1
ProteinModelPortal:Q9LZI2 SMR:Q9LZI2 PRIDE:Q9LZI2
EnsemblPlants:AT3G62830.1 EnsemblPlants:AT3G62830.2 GeneID:825458
KEGG:ath:AT3G62830 TAIR:At3g62830 InParanoid:Q9LZI2
PhylomeDB:Q9LZI2 ProtClustDB:PLN02206 Genevestigator:Q9LZI2
Uniprot:Q9LZI2
Length = 445
Score = 234 (87.4 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 91/327 (27%), Positives = 142/327 (43%)
Query: 90 GMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
G+ V+VTG AGFVG+H+ L RGD V+ +DNF K+ +N +I
Sbjct: 118 GLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFT----GRKENVMHHFSNPNFEMIRH 173
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAG-VRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
D+ + LL + HLA A V Y NP + +N+ G + +L K
Sbjct: 174 DVVEPILLE-------VDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGA 225
Query: 209 QPSIVWASSSSVYGLNENVPFSEADRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSI 264
+ + S+S VYG P E + P S Y K+ E + Y+ + +
Sbjct: 226 R--FLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEV 283
Query: 265 TGLRFFTVYGPWGRPD--MAYFSFTRNILQGKPITVYR-GKNHVDLARDFTYIDDIVKGC 321
R F YGP D +F L+ +P+TVY GK R F ++ D+V+G
Sbjct: 284 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQ----TRSFQFVSDLVEGL 339
Query: 322 LGSLDTS-AGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHA 380
+ ++ GP FNLGN T+ +L +++ + A N+ P D P
Sbjct: 340 MRLMEGEHVGP-----FNLGNPGEFTMLELAKVVQETIDPNA--NIEFRPNTEDDPHKRK 392
Query: 381 -NISSAQKEFGYRPTTDLQTGLKKFVR 406
+I+ A++ G+ P L+ GL V+
Sbjct: 393 PDITKAKELLGWEPKVSLRQGLPLMVK 419
>UNIPROTKB|P55294 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122586
"Neisseria meningitidis MC58" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE002098 GenomeReviews:AE002098_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
ProtClustDB:CLSK877380 EMBL:L09188 PIR:G81242 PIR:S42431
RefSeq:NP_273127.1 RefSeq:NP_273142.1 ProteinModelPortal:P55294
SMR:P55294 EnsemblBacteria:EBNEIT00000009034
EnsemblBacteria:EBNEIT00000009474 GeneID:902170 GeneID:902183
KEGG:nme:NMB0063 KEGG:nme:NMB0079 PATRIC:20355131 OMA:ARSWWNT
BioCyc:NMEN122586:GHGG-64-MONOMER BioCyc:NMEN122586:GHGG-80-MONOMER
Uniprot:P55294
Length = 355
Score = 229 (85.7 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 87/337 (25%), Positives = 147/337 (43%)
Query: 93 VLVTGAAGFVGTHVSL-ALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDI 151
+LVTG AGF+G+ V ++ D VV +D Y +L+ + N F + DI
Sbjct: 4 ILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLT--YAGNLESLTEVADNPRYAFE-QVDI 60
Query: 152 NDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ-P 210
D L ++F VMHLAA++ V ++ + ++ +NI G LLEA ++ Q P
Sbjct: 61 CDRAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMP 120
Query: 211 S-------IVWASSSSVYG-LNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL 262
S S+ VYG L P+S Y+A+K + + + + YGL
Sbjct: 121 SEQHEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGL 180
Query: 263 SITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCL 322
YGP+ P+ N L GKP+ VY + RD+ +++D +
Sbjct: 181 PTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQI---RDWLFVEDHARALY 237
Query: 323 GSLDTSAGPAPYRIFNLGNTSPVTVPKLVNIL------ERHLKVKAKKNVI----EMPGN 372
+ Y I + + V K + L E+ V +++I + PG+
Sbjct: 238 QVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGH 297
Query: 373 GDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYL 409
DV + + + +++ G+ P ++GL+K V+WYL
Sbjct: 298 -DVRYA-VDAAKIRRDLGWLPLETFESGLRKTVQWYL 332
>UNIPROTKB|P37759 [details] [associations]
symbol:rfbB "RmlB" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;ISS] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;ISS] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 OMA:KWWSRVL EMBL:U09876
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PIR:H64969 RefSeq:NP_416545.1 RefSeq:YP_490283.1
ProteinModelPortal:P37759 SMR:P37759 DIP:DIP-10680N IntAct:P37759
MINT:MINT-1302103 PRIDE:P37759 EnsemblBacteria:EBESCT00000003521
EnsemblBacteria:EBESCT00000014484 GeneID:12930685 GeneID:945276
KEGG:ecj:Y75_p2004 KEGG:eco:b2041 PATRIC:32119415 EchoBASE:EB2311
EcoGene:EG12412 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT-MONOMER
BioCyc:ECOL316407:JW2026-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT-MONOMER Genevestigator:P37759
PANTHER:PTHR10366:SF41 Uniprot:P37759
Length = 361
Score = 143 (55.4 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 45/192 (23%), Positives = 82/192 (42%)
Query: 225 ENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYF 284
E +P P+S Y+A+K + + + + YGL YGP+ P+
Sbjct: 150 EELPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIP 209
Query: 285 SFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSP 344
N L+GK + +Y GK D RD+ Y++D + + Y I
Sbjct: 210 LVILNALEGKALPIY-GKG--DQIRDWLYVEDHARALYTVVTEGKAGETYNIGGHNEKKN 266
Query: 345 VTVPKLV-NILERHL-KVKAKKN----VIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQ 398
+ V + ++L+ + K K+ + V + PG+ D + + + G++P +
Sbjct: 267 IDVVLTICDLLDEIVPKEKSYREQITYVADRPGH-DRRYA-IDAEKIGRALGWKPQETFE 324
Query: 399 TGLKKFVRWYLS 410
+G++K V WYLS
Sbjct: 325 SGIRKTVEWYLS 336
Score = 136 (52.9 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 38/116 (32%), Positives = 59/116 (50%)
Query: 91 MSVLVTGAAGFVGTHVSL-ALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
M +LVTG AGF+G+ V + D VV +D Y + + + VF
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLT--YAGNRESLADVSDSERYVFE-HA 57
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKS 205
DI DA +A++F VMHLAA++ V ++ P +++ +NI G LLEA ++
Sbjct: 58 DICDAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARN 113
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 228 (85.3 bits), Expect = 9.0e-17, P = 9.0e-17
Identities = 85/333 (25%), Positives = 144/333 (43%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
+L+TG AGFVG+H++ L G V +DNF K+ + + + +I D+
Sbjct: 34 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDV- 88
Query: 153 DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
+ L+ + + HLA+ A M NP + +N G + +L K + +
Sbjct: 89 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 140
Query: 213 VWASSSSVYGLNENVPFSEA--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
+ AS+S VYG E P SE + P + Y K+ E + + Y G+ + R
Sbjct: 141 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 200
Query: 269 FFTVYGP-WGRPDMAYFS-FTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLD 326
F +GP D S F LQG+P+TVY + R F Y+ D+V G + ++
Sbjct: 201 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQT---RAFQYVSDLVNGLVALMN 257
Query: 327 TSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQ 386
++ +P NLGN T+ + ++ ++L + D +I A+
Sbjct: 258 SNVS-SPV---NLGNPEEHTILEFAQLI-KNLVGSGSEIQFLSEAQDDPQKRKPDIKKAK 312
Query: 387 KEFGYRPTTDLQTGLKKFVRWY---LSYYGYNR 416
G+ P L+ GL K + ++ L Y N+
Sbjct: 313 LMLGWEPVVPLEEGLNKAIHYFRKELEYQANNQ 345
>DICTYBASE|DDB_G0279465 [details] [associations]
symbol:tgds "putative dTDP-D-glucose 4,6-dehydratase"
species:44689 "Dictyostelium discoideum" [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 dictyBase:DDB_G0279465 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:CM000152_GR GO:GO:0050662
GO:GO:0009225 EMBL:AAFI02000031 GO:GO:0008460 eggNOG:COG1088
HSSP:P27830 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
RefSeq:XP_641641.1 ProteinModelPortal:Q54WS6 STRING:Q54WS6
EnsemblProtists:DDB0231748 GeneID:8622047 KEGG:ddi:DDB_G0279465
ProtClustDB:CLSZ2430684 Uniprot:Q54WS6
Length = 434
Score = 225 (84.3 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 67/239 (28%), Positives = 116/239 (48%)
Query: 93 VLVTGAAGFVGTHVSLALKKR--GDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
+L+TG AGF+G+H+++ L K+ ++ LD + Y ++ L + F +G+
Sbjct: 12 ILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLD--YCSNINNLGCVLKELNFKFY-KGN 68
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I D++LL +F+ V+HLAA V + + + +NI G LLE CK+ +
Sbjct: 69 ILDSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCKNYKLK- 127
Query: 211 SIVWASSSSVYGL---------NENVPFSEADRTD-QPASLYAATKKAGEEIAHTYNHIY 260
++ S+ VYG N ++ S +++ P + Y+A+K E + +Y +
Sbjct: 128 KFIYVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSF 187
Query: 261 GLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVY-RGKNHVDLARDFTYIDDIV 318
L + R +YGP P+ F +L K T++ GKN R++ YIDDIV
Sbjct: 188 KLPVIITRANNIYGPKQYPEKIIPKFINLLLNNKKCTIHGTGKN----TRNYLYIDDIV 242
Score = 44 (20.5 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 374 DVPFT-HA-NIS-SAQKEFGYRPTTDLQTGLKKFVRWYLSYYGY 414
D PF H NI+ S G++ + + G++K WY + Y
Sbjct: 325 DRPFNDHRYNINYSKLSNLGWKKSISWEEGIEKTFIWYKNNRNY 368
>TAIR|locus:2053275 [details] [associations]
symbol:UXS6 "UDP-XYL synthase 6" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC005727 HSSP:P27830 HOGENOM:HOG000168004 OMA:LGHENFE
ProtClustDB:CLSN2683686 EMBL:AY099703 EMBL:AY128899 IPI:IPI00536112
PIR:F84688 RefSeq:NP_001077972.1 RefSeq:NP_180443.1
RefSeq:NP_973555.1 UniGene:At.38572 ProteinModelPortal:Q9ZV36
SMR:Q9ZV36 STRING:Q9ZV36 PRIDE:Q9ZV36 EnsemblPlants:AT2G28760.1
EnsemblPlants:AT2G28760.2 EnsemblPlants:AT2G28760.3 GeneID:817426
KEGG:ath:AT2G28760 TAIR:At2g28760 InParanoid:Q9ZV36
PhylomeDB:Q9ZV36 ArrayExpress:Q9ZV36 Genevestigator:Q9ZV36
Uniprot:Q9ZV36
Length = 343
Score = 224 (83.9 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 85/320 (26%), Positives = 142/320 (44%)
Query: 91 MSVLVTGAAGFVGTH-VSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVF-VIE 148
M +LVTG AGF+G+H V ++ + V+ DN Y+ S +K + H F +I
Sbjct: 31 MRILVTGGAGFIGSHLVDKLMQNEKNEVIVADN---YFTGSKDNLKKWI--GHPRFELIR 85
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
D+ + LF V + HLA A + NP + +N+ G + +L K
Sbjct: 86 HDVTEP-----LF--VEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA 138
Query: 209 QPSIVWASSSSVYGLNENVPFSEADRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSI 264
+ I+ S+S VYG P +E+ + P S Y K+ E + Y+ +G+ I
Sbjct: 139 R--ILLTSTSEVYGDPLVHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 196
Query: 265 TGLRFFTVYGPWGRPD--MAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCL 322
R F YGP D +F L+G+ +TV + R F Y+ D+V+G +
Sbjct: 197 RIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQT---RSFCYVSDMVEGLM 253
Query: 323 GSLD-TSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHAN 381
++ GP N+GN T+ +L ++ +K + ++E + D +
Sbjct: 254 RLMEGDQTGP-----INIGNPGEFTMVELAETVKELIKPDVEIKMVENTPD-DPRQRKPD 307
Query: 382 ISSAQKEFGYRPTTDLQTGL 401
IS A++ G+ P L+ GL
Sbjct: 308 ISKAKEVLGWEPKVKLREGL 327
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 228 (85.3 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 85/333 (25%), Positives = 144/333 (43%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
+L+TG AGFVG+H++ L G V +DNF K+ + + + +I D+
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDV- 145
Query: 153 DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
+ L+ + + HLA+ A M NP + +N G + +L K + +
Sbjct: 146 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 213 VWASSSSVYGLNENVPFSEA--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
+ AS+S VYG E P SE + P + Y K+ E + + Y G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 269 FFTVYGP-WGRPDMAYFS-FTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLD 326
F +GP D S F LQG+P+TVY + R F Y+ D+V G + ++
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQT---RAFQYVSDLVNGLVALMN 314
Query: 327 TSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQ 386
++ +P NLGN T+ + ++ ++L + D +I A+
Sbjct: 315 SNVS-SPV---NLGNPEEHTILEFAQLI-KNLVGSGSEIQFLSEAQDDPQKRKPDIKKAK 369
Query: 387 KEFGYRPTTDLQTGLKKFVRWY---LSYYGYNR 416
G+ P L+ GL K + ++ L Y N+
Sbjct: 370 LMLGWEPVVPLEEGLNKAIHYFRKELEYQANNQ 402
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 228 (85.3 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 85/333 (25%), Positives = 144/333 (43%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
+L+TG AGFVG+H++ L G V +DNF K+ + + + +I D+
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDV- 145
Query: 153 DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
+ L+ + + HLA+ A M NP + +N G + +L K + +
Sbjct: 146 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 213 VWASSSSVYGLNENVPFSEA--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
+ AS+S VYG E P SE + P + Y K+ E + + Y G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 269 FFTVYGP-WGRPDMAYFS-FTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLD 326
F +GP D S F LQG+P+TVY + R F Y+ D+V G + ++
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQT---RAFQYVSDLVNGLVALMN 314
Query: 327 TSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQ 386
++ +P NLGN T+ + ++ ++L + D +I A+
Sbjct: 315 SNVS-SPV---NLGNPEEHTILEFAQLI-KNLVGSGSEIQFLSEAQDDPQKRKPDIKKAK 369
Query: 387 KEFGYRPTTDLQTGLKKFVRWY---LSYYGYNR 416
G+ P L+ GL K + ++ L Y N+
Sbjct: 370 LMLGWEPVVPLEEGLNKAIHYFRKELEYQANNQ 402
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 228 (85.3 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 85/333 (25%), Positives = 144/333 (43%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
+L+TG AGFVG+H++ L G V +DNF K+ + + + +I D+
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDV- 145
Query: 153 DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
+ L+ + + HLA+ A M NP + +N G + +L K + +
Sbjct: 146 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 213 VWASSSSVYGLNENVPFSEA--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
+ AS+S VYG E P SE + P + Y K+ E + + Y G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 269 FFTVYGP-WGRPDMAYFS-FTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLD 326
F +GP D S F LQG+P+TVY + R F Y+ D+V G + ++
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQT---RAFQYVSDLVNGLVALMN 314
Query: 327 TSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQ 386
++ +P NLGN T+ + ++ ++L + D +I A+
Sbjct: 315 SNVS-SPV---NLGNPEEHTILEFAQLI-KNLVGSGSEIQFLSEAQDDPQKRKPDIKKAK 369
Query: 387 KEFGYRPTTDLQTGLKKFVRWY---LSYYGYNR 416
G+ P L+ GL K + ++ L Y N+
Sbjct: 370 LMLGWEPVVPLEEGLNKAIHYFRKELEYQANNQ 402
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 228 (85.3 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 85/333 (25%), Positives = 144/333 (43%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
+L+TG AGFVG+H++ L G V +DNF K+ + + + +I D+
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDV- 145
Query: 153 DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
+ L+ + + HLA+ A M NP + +N G + +L K + +
Sbjct: 146 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 213 VWASSSSVYGLNENVPFSEA--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
+ AS+S VYG E P SE + P + Y K+ E + + Y G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 269 FFTVYGP-WGRPDMAYFS-FTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLD 326
F +GP D S F LQG+P+TVY + R F Y+ D+V G + ++
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQT---RAFQYVSDLVNGLVALMN 314
Query: 327 TSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQ 386
++ +P NLGN T+ + ++ ++L + D +I A+
Sbjct: 315 SNVS-SPV---NLGNPEEHTILEFAQLI-KNLVGSGSEIQFLSEAQDDPQKRKPDIKKAK 369
Query: 387 KEFGYRPTTDLQTGLKKFVRWY---LSYYGYNR 416
G+ P L+ GL K + ++ L Y N+
Sbjct: 370 LMLGWEPVVPLEEGLNKAIHYFRKELEYQANNQ 402
>TIGR_CMR|BA_5700 [details] [associations]
symbol:BA_5700 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:Q14376 RefSeq:NP_847846.1 RefSeq:YP_022385.1
RefSeq:YP_031541.1 ProteinModelPortal:Q81JK4 SMR:Q81JK4
DNASU:1085447 EnsemblBacteria:EBBACT00000009571
EnsemblBacteria:EBBACT00000018180 EnsemblBacteria:EBBACT00000022977
GeneID:1085447 GeneID:2816576 GeneID:2853003 KEGG:ban:BA_5700
KEGG:bar:GBAA_5700 KEGG:bat:BAS5304 OMA:TENNIDW
ProtClustDB:CLSK888129 BioCyc:BANT260799:GJAJ-5377-MONOMER
BioCyc:BANT261594:GJ7F-5553-MONOMER Uniprot:Q81JK4
Length = 338
Score = 223 (83.6 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 84/342 (24%), Positives = 154/342 (45%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M++L+TG AG++G+H + L ++ +DN +N SL + K + F E
Sbjct: 1 MAILITGGAGYIGSHTCVELLNNNYKIIVVDNLSNSSIESLNRV-KEITGKQFEFYKENV 59
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
+N K+ ++F V+H A V + P +Y ++NI + L + + N +
Sbjct: 60 LNREKM-NEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYNNIISAIVLCDVMQKHNVK- 117
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASL---YAATKKAGEEIAHTYNHIYG-LSITG 266
+ +++SS++VYG+ + +P +E + P S+ Y TK E+I SI
Sbjct: 118 NFIFSSSATVYGIPKTLPITE----EFPLSVTNPYGQTKLMIEQIMRDVAKADDEWSIAL 173
Query: 267 LRFFTVYG----------PWGRPDMAYFSFTRNILQGK--PITVYRGKNHVDL----ARD 310
LR+F +G P G P+ + + GK + ++ G ++ RD
Sbjct: 174 LRYFNPFGAHQSGRIGEDPNGIPNNL-MPYVTQVAVGKLKELNIF-GNDYPTKDGTGVRD 231
Query: 311 FTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMP 370
+ ++ D+ KG + +L+ +NLG +V ++V E KV KK ++
Sbjct: 232 YIHVVDLAKGHVKALEKVLKTKGIEAYNLGTGKGYSVLEMVKAFE---KVSGKKIPYKVI 288
Query: 371 GN--GDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLS 410
G GDV A++S A++E G+ L+ RW ++
Sbjct: 289 GRRPGDVAICFADVSKAKRELGWEAEYGLEEMCVDSWRWQVN 330
>TIGR_CMR|BA_5505 [details] [associations]
symbol:BA_5505 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000168001
OMA:SHPNGYN GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:NP_847665.1 RefSeq:YP_022172.1 RefSeq:YP_031353.1 PDB:2C20
PDBsum:2C20 ProteinModelPortal:Q81K34 SMR:Q81K34 DNASU:1085150
EnsemblBacteria:EBBACT00000011015 EnsemblBacteria:EBBACT00000018769
EnsemblBacteria:EBBACT00000021224 GeneID:1085150 GeneID:2819098
GeneID:2850681 KEGG:ban:BA_5505 KEGG:bar:GBAA_5505 KEGG:bat:BAS5114
ProtClustDB:CLSK917664 BioCyc:BANT260799:GJAJ-5189-MONOMER
BioCyc:BANT261594:GJ7F-5367-MONOMER EvolutionaryTrace:Q81K34
Uniprot:Q81K34
Length = 330
Score = 222 (83.2 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 83/341 (24%), Positives = 146/341 (42%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDI 151
S+L+ G AG++G+H L G VV +DN ++ ++ + K GD+
Sbjct: 3 SILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAK---------FYNGDL 53
Query: 152 NDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPS 211
D L +F VMH AA + V +M+ P Y ++N+ G + LLE
Sbjct: 54 RDKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVD-K 112
Query: 212 IVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 271
+++S+++ YG +V + P + Y TK A E++ H Y+ L R+F
Sbjct: 113 FIFSSTAATYG-EVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFN 171
Query: 272 VYG--PWG------RPDMAYFSFTRNILQGK--PITVYRGK-NHVD--LARDFTYIDDIV 318
V G P G RP+ + G+ I ++ N D RD+ +++D+V
Sbjct: 172 VAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLV 231
Query: 319 KG-CLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPF 377
LG D G +NLGN + +V ++V+ + + V GD
Sbjct: 232 AAHFLGLKDLQNG-GESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRA-GDPAR 289
Query: 378 THANISSAQKEFGYRPT-TDLQTGLKKFVRWYLSY-YGYNR 416
A+ A+++ G+ P +++T ++ W+ GY +
Sbjct: 290 LVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQPNGYEK 330
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 226 (84.6 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 85/333 (25%), Positives = 144/333 (43%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
+LVTG AGFVG+H++ L G V +DNF K+ + + + +I D+
Sbjct: 91 ILVTGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDV- 145
Query: 153 DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
+ L+ + + HLA+ A M NP + +N G + +L K + +
Sbjct: 146 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 213 VWASSSSVYGLNENVPFSEA--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
+ AS+S VYG E P +E + P + Y K+ E + + Y G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 269 FFTVYGP-WGRPDMAYFS-FTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLD 326
F +GP D S F LQG+P+TVY + R F Y+ D+V G + ++
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQT---RAFQYVSDLVNGLVALMN 314
Query: 327 TSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQ 386
++ +P NLGN T+ + ++ ++L + D +I A+
Sbjct: 315 SNVS-SPV---NLGNPEEHTILEFAQLI-KNLVGSGSEIQFLSEAQDDPQKRKPDIKKAK 369
Query: 387 KEFGYRPTTDLQTGLKKFVRWY---LSYYGYNR 416
G+ P L+ GL K + ++ L Y N+
Sbjct: 370 LMLGWEPVVPLEEGLNKAIHYFRKELEYQANNQ 402
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 225 (84.3 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 84/333 (25%), Positives = 144/333 (43%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
+L+TG AGFVG+H++ L G V +DNF K+ + + + +I D+
Sbjct: 68 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDV- 122
Query: 153 DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
+ L+ + + HLA+ A M NP + +N G + +L K + +
Sbjct: 123 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 174
Query: 213 VWASSSSVYGLNENVPFSEA--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
+ AS+S VYG E P +E + P + Y K+ E + + Y G+ + R
Sbjct: 175 LLASTSEVYGDPEVHPQTEDYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 234
Query: 269 FFTVYGP-WGRPDMAYFS-FTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLD 326
F +GP D S F LQG+P+TVY + R F Y+ D+V G + ++
Sbjct: 235 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQT---RAFQYVSDLVNGLVALMN 291
Query: 327 TSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQ 386
++ +P NLGN T+ + ++ ++L + D +I A+
Sbjct: 292 SNVS-SPV---NLGNPEEHTILEFAQLI-KNLVGSGSEIQFLSEAQDDPQKRKPDIKKAK 346
Query: 387 KEFGYRPTTDLQTGLKKFVRWY---LSYYGYNR 416
G+ P L+ GL K + ++ L Y N+
Sbjct: 347 LMLGWEPVVPLEEGLNKAIHYFRKELEYQANNQ 379
>UNIPROTKB|P37761 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:485
"Neisseria gonorrhoeae" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PANTHER:PTHR10366:SF41 EMBL:Z32742 EMBL:Z21508
PIR:S47045 ProteinModelPortal:P37761 SMR:P37761 Uniprot:P37761
Length = 346
Score = 222 (83.2 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 92/353 (26%), Positives = 151/353 (42%)
Query: 89 GGMSVLVTGAAGFVGTHVSL-ALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVI 147
G ++LVTG AGF+G+ V ++ D VV LD Y +L+ N F
Sbjct: 5 GKKNILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLT--YAGNLESLTDIADNPRYAFE- 61
Query: 148 EGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSAN 207
+ DI D L ++F VMHLAA++ V A+ + ++ +NI G LLEA ++
Sbjct: 62 QVDICDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYW 121
Query: 208 PQ-PS-------IVWASSSSVYGLNENVPFSEADRTDQ-PASLYAATKKAGEEIAHTYNH 258
Q PS S+ VYG + T P+S Y+A+K A + + +
Sbjct: 122 QQMPSEKREAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKAAADHLVRAWQR 181
Query: 259 IYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIV 318
Y L YGP P+ N L GKP+ VY + RD+ +++D
Sbjct: 182 TYRLPSIVSNCSNNYGPRQFPEKLIPLMILNALSGKPLPVYGDGAQI---RDWLFVEDHA 238
Query: 319 KGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNIL------ERHLKVKAKKNVI----E 368
+ + Y I + + V K + L E+ V +++I +
Sbjct: 239 RALYQVVTEGVVGETYNIGGHNEKTNLEVVKTICALLEELAPEKPAGVARYEDLITFVQD 298
Query: 369 MPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYYGYNRGKRVN 421
PG+ D + + + +++ G+ P ++GL+K V+WYL N+ +R N
Sbjct: 299 RPGH-DARYA-VDAAKIRRDLGWLPLETFESGLRKTVQWYLD----NKTRRQN 345
>TIGR_CMR|SO_1664 [details] [associations]
symbol:SO_1664 "UDP-glucose 4-epimerase" species:211586
"Shewanella oneidensis MR-1" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0005975 "carbohydrate metabolic
process" evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_717275.1 ProteinModelPortal:Q8EGE0
GeneID:1169457 KEGG:son:SO_1664 PATRIC:23522965 OMA:CGKSIAY
ProtClustDB:CLSK906369 Uniprot:Q8EGE0
Length = 337
Score = 221 (82.9 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 83/332 (25%), Positives = 145/332 (43%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M++LVTG AG++GTH + L G V+ LDN +N +L + + + V +GD
Sbjct: 1 MTILVTGGAGYIGTHTVVELLNAGSEVIVLDNLSNSSIEALDRVER--ITGKSVTFYQGD 58
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I + LL K+F + V+H A V ++ P Y +N+ G + L + +
Sbjct: 59 ILNKALLQKVFSDHSIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQVMAEFKVK- 117
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIY-GLSITGLRF 269
++V++SS++VYG ++P +E D + Y +K E I +H +I LR+
Sbjct: 118 NLVFSSSATVYGDPASLPITE-DFPTGATNPYGQSKLMVEHILADLHHSDPSWNIARLRY 176
Query: 270 FTVYGPWGR------P-DMA--YFSFTRNILQGK--PITVYRGK--NHVDLA-RDFTYID 315
F G P D+ F + GK ++V+ H RD+ ++
Sbjct: 177 FNPVGAHASGLIGEDPNDIPNNLMPFIAQVAVGKREALSVFGNDYPTHDGTGVRDYIHVV 236
Query: 316 DIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDV 375
D+ G L +L+ A +NLG +V +V E+ K+ +I GD+
Sbjct: 237 DLAIGHLKALEKLATKPGLVTYNLGTGQGYSVLDMVKAFEKACG-KSIAYLIAPRRPGDI 295
Query: 376 PFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
+A+ A+ + ++ T L+ W
Sbjct: 296 AACYADPDHAKTDLDWQATHSLEDMANSSWHW 327
>UNIPROTKB|P55293 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:562
"Escherichia coli" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AF125322
GO:GO:0009103 GO:GO:0045226 GO:GO:0009243 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
PANTHER:PTHR10366:SF41 PIR:S78542 ProteinModelPortal:P55293
SMR:P55293 PRIDE:P55293 SABIO-RK:P55293 Uniprot:P55293
Length = 361
Score = 145 (56.1 bits), Expect = 5.8e-16, Sum P(2) = 5.8e-16
Identities = 45/193 (23%), Positives = 83/193 (43%)
Query: 224 NENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAY 283
NE + P+S Y+A+K + + + + YGL YGP+ P+
Sbjct: 149 NETLQLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVSNCSNNYGPYHFPEKLI 208
Query: 284 FSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTS 343
N L+GK + +Y GK D RD+ Y++D + + Y I
Sbjct: 209 PLVILNALEGKALPIY-GKG--DQIRDWLYVEDHARALYTVVTEGKAGETYNIGGHNEKK 265
Query: 344 PVTVP-KLVNILERHL-KVKAKKN----VIEMPGNGDVPFTHANISSAQKEFGYRPTTDL 397
+ V + ++L+ + K K+ + V + PG+ D + + +E G++P
Sbjct: 266 NIDVVFTICDLLDEIVPKEKSYREQITYVADRPGH-DRRYA-IDADKISRELGWKPQETF 323
Query: 398 QTGLKKFVRWYLS 410
++G++K V WYL+
Sbjct: 324 ESGIRKTVEWYLA 336
Score = 125 (49.1 bits), Expect = 5.8e-16, Sum P(2) = 5.8e-16
Identities = 38/117 (32%), Positives = 60/117 (51%)
Query: 91 MSVLVTGAAGFVGTHVSL-ALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
M +LVTG AGF+G+ V + D VV +D Y +L+ A +++ + E
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLT--YAGNLESL--AEISDSERYSFEN 56
Query: 150 -DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKS 205
DI DA+ F VMHLAA++ V ++ P +++ +NI G LLEA ++
Sbjct: 57 ADICDAEGDGLYFGQHQLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARN 113
>TAIR|locus:2010371 [details] [associations]
symbol:UGE1 "UDP-D-glucose/UDP-D-galactose 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0046983 "protein
dimerization activity" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0046369 "galactose biosynthetic process"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AC012187
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 EMBL:Z54214 EMBL:AF334724
EMBL:AY054207 EMBL:AY120709 EMBL:BT000032 IPI:IPI00533120
PIR:B86261 PIR:S62783 RefSeq:NP_172738.1 UniGene:At.20506
UniGene:At.27284 ProteinModelPortal:Q42605 SMR:Q42605 IntAct:Q42605
STRING:Q42605 PaxDb:Q42605 PRIDE:Q42605 EnsemblPlants:AT1G12780.1
GeneID:837834 KEGG:ath:AT1G12780 TAIR:At1g12780 InParanoid:Q42605
OMA:CEAILAD PhylomeDB:Q42605 ProtClustDB:PLN02240
BioCyc:ARA:AT1G12780-MONOMER BioCyc:MetaCyc:AT1G12780-MONOMER
Genevestigator:Q42605 GermOnline:AT1G12780 Uniprot:Q42605
Length = 351
Score = 220 (82.5 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 88/323 (27%), Positives = 147/323 (45%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKAL---LNNHGVFVIE 148
++LVTG AGF+GTH + L K G V +DNF+N ++ + R+ + L+ F +
Sbjct: 8 NILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNL- 66
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
GD+ + + KLF F V+H A V +++NP Y +N+ G + L E N
Sbjct: 67 GDLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYNC 126
Query: 209 QPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYG-LSITGL 267
+ +V++SS++VYG E +P E D + + Y TK EEIA I L
Sbjct: 127 K-MMVFSSSATVYGQPEKIPCME-DFELKAMNPYGRTKLFLEEIARDIQKAEPEWRIILL 184
Query: 268 RFFTVYG----------PWGRPDMAYFSFTRNILQGK-P-ITVYRGKNHV----DLARDF 311
R+F G P G P+ + + + G+ P + VY G ++ RD+
Sbjct: 185 RYFNPVGAHESGSIGEDPKGIPNNL-MPYIQQVAVGRLPELNVY-GHDYPTEDGSAVRDY 242
Query: 312 TYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEM-P 370
++ D+ G + +L P N ++ ++ K KK I++ P
Sbjct: 243 IHVMDLADGHIAALRKLFAD-PKIGCTAYNLGTGQGTSVLEMVAAFEKASGKKIPIKLCP 301
Query: 371 G-NGDVPFTHANISSAQKEFGYR 392
+GD +A+ A+KE G++
Sbjct: 302 RRSGDATAVYASTEKAEKELGWK 324
>UNIPROTKB|F1PU61 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR021761
Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:AAEX03007410 Ensembl:ENSCAFT00000003315 Uniprot:F1PU61
Length = 414
Score = 222 (83.2 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 84/333 (25%), Positives = 143/333 (42%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
+L+TG AGFVG+H++ L G V +DNF K+ + + + +I D+
Sbjct: 85 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDV- 139
Query: 153 DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
+ L+ + + HLA+ A M NP + +N G + +L K + +
Sbjct: 140 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 191
Query: 213 VWASSSSVYGLNENVPFSEA--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
+ AS+S VYG E P SE + P + Y K+ E + + Y G+ + R
Sbjct: 192 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 251
Query: 269 FFTVYGP-WGRPDMAYFS-FTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLD 326
F +GP D S F LQG+P+TVY + R F Y+ D+V G + ++
Sbjct: 252 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQT---RAFQYVSDLVNGLVALMN 308
Query: 327 TSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQ 386
++ +P NLGN T+ + ++ ++L + D +I A+
Sbjct: 309 SNVS-SPV---NLGNPEEHTILEFAQLI-KNLVGSGSEIQFLSEAQDDPQKRKPDIRKAK 363
Query: 387 KEFGYRPTTDLQTGLKKFVRWY---LSYYGYNR 416
+ P L+ GL K + ++ L Y N+
Sbjct: 364 MMLAWEPVVPLEEGLNKAIHYFRKELEYQANNQ 396
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 222 (83.2 bits), Expect = 9.5e-16, P = 9.5e-16
Identities = 84/333 (25%), Positives = 146/333 (43%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
+L+TG AGFVG+H++ L G V +DNF K+ + + + +I D+
Sbjct: 92 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDV- 146
Query: 153 DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
+ L+ + + HLA+ A M NP + +N G + +L K + +
Sbjct: 147 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 198
Query: 213 VWASSSSVYGLNENVPFSEA--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
+ AS+S VYG E P +E + P + Y K+ E + + Y G+ + R
Sbjct: 199 LLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 258
Query: 269 FFTVYGP-WGRPDMAYFS-FTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLD 326
F +GP D S F LQG+P+TVY G R F Y+ D+V G + ++
Sbjct: 259 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVY-GPG--TQTRAFQYVSDLVNGLVALMN 315
Query: 327 TSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQ 386
++ +P NLGN T+ + ++++ + ++ + D +I A+
Sbjct: 316 SNVS-SPV---NLGNPEEHTILEFAQLIKKLVGSGSEIQFLS-EAQDDPQKRKPDIRKAK 370
Query: 387 KEFGYRPTTDLQTGLKKFVRWY---LSYYGYNR 416
G+ P L+ GL K + ++ L Y N+
Sbjct: 371 LLLGWEPVVPLEEGLNKAIHYFRKELEYQANNQ 403
>TIGR_CMR|GSU_2240 [details] [associations]
symbol:GSU_2240 "UDP-glucose 4-epimerase" species:243231
"Geobacter sulfurreducens PCA" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_953289.1 ProteinModelPortal:Q74AW0
GeneID:2687202 KEGG:gsu:GSU2240 PATRIC:22027335 OMA:VEHARQG
ProtClustDB:CLSK828777 BioCyc:GSUL243231:GH27-2212-MONOMER
Uniprot:Q74AW0
Length = 326
Score = 216 (81.1 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 92/334 (27%), Positives = 150/334 (44%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M VLVTG AG++G+HV L + G VV DN + + P AL+ HG ++ GD
Sbjct: 1 MPVLVTGGAGYIGSHVVRQLSEAGYTVVVYDNLSTGF-PD------ALV--HGERLVTGD 51
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
++D L LF F+ V+H AA ++ P Y +N + LL AC +
Sbjct: 52 LSDTARLDALFVEYGFSTVLHFAASIIAPESVTAPLKYYGNNTRNTLNLLGACVKHGVE- 110
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFF 270
+++S+++VYG+ ++ +E T P + Y +K E + +G+ LR+F
Sbjct: 111 RFIFSSTAAVYGIPDSGVAAEESAT-VPINPYGTSKLMSEWMLRDVCAAHGMRSVALRYF 169
Query: 271 TVYG--PWGR-----PDMAYF---SFTRNI-LQGKPI---TVYRGKNHVDLARDFTYIDD 316
V G P R P+ + S + L+ K T Y + + RD+ +++D
Sbjct: 170 NVAGADPQARMGQRTPEATHLIKVSCQAALGLRDKVCIFGTDYPTPDGTGI-RDYIHVED 228
Query: 317 IVKGCLGSLD-TSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGN-GD 374
+ L +L G RI N+G S +V ++++++ R V E P GD
Sbjct: 229 LASAHLAALSYLEKGGESTRI-NVGYGSGSSVREVIDMVRRVSGVHFLAE--EAPRRPGD 285
Query: 375 VPFTHANISSAQKEFGYRPTTD-LQTGLKKFVRW 407
P A A+ G+ P D L+T + RW
Sbjct: 286 PPSLVARADRARTLLGWTPRYDNLETIVADAWRW 319
>UNIPROTKB|Q5QPP1 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00641123 SMR:Q5QPP1
Ensembl:ENST00000445705 Uniprot:Q5QPP1
Length = 194
Score = 202 (76.2 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 57/164 (34%), Positives = 87/164 (53%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYY--DPSLKKARKAL--LNNHGVFVIE 148
VLVTG AG++G+H L L + G V +DNF+N + SL ++ + + L V E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
DI D L +LF +F V+H A V ++Q P Y N+ G + LLE K A+
Sbjct: 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK-AHG 123
Query: 209 QPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEI 252
++V++SS++VYG + +P EA T + Y +K EE+
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM 167
>UNIPROTKB|Q5QPP2 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644364 SMR:Q5QPP2
Ensembl:ENST00000425913 Uniprot:Q5QPP2
Length = 195
Score = 202 (76.2 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 57/164 (34%), Positives = 87/164 (53%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYY--DPSLKKARKAL--LNNHGVFVIE 148
VLVTG AG++G+H L L + G V +DNF+N + SL ++ + + L V E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
DI D L +LF +F V+H A V ++Q P Y N+ G + LLE K A+
Sbjct: 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK-AHG 123
Query: 209 QPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEI 252
++V++SS++VYG + +P EA T + Y +K EE+
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM 167
>TAIR|locus:2168539 [details] [associations]
symbol:UXS3 "UDP-glucuronic acid decarboxylase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;IDA] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
GO:GO:0048040 IPI:IPI00846930 RefSeq:NP_001078768.1
UniGene:At.24136 ProteinModelPortal:F4KHU8 SMR:F4KHU8 PRIDE:F4KHU8
EnsemblPlants:AT5G59290.2 GeneID:836047 KEGG:ath:AT5G59290
OMA:EINMVEN ArrayExpress:F4KHU8 Uniprot:F4KHU8
Length = 357
Score = 215 (80.7 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 81/320 (25%), Positives = 138/320 (43%)
Query: 91 MSVLVTGAAGFVGTH-VSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVF-VIE 148
M +L++G AGF+G+H V ++ + VV DN Y+ S + +K + H F +I
Sbjct: 45 MRILISGGAGFIGSHLVDKLMENEKNEVVVADN---YFTGSKENLKKWI--GHPRFELIR 99
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
D+ + L + + HLA A + NP + +N+ G + +L K
Sbjct: 100 HDVTEPLL-------IEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA 152
Query: 209 QPSIVWASSSSVYG--LNENVPFSEADRTDQPA--SLYAATKKAGEEIAHTYNHIYGLSI 264
+ I+ S+S VYG L P S + S Y K+ E + Y+ +G+ I
Sbjct: 153 R--ILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 210
Query: 265 TGLRFFTVYGPWGRPD--MAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCL 322
R F YGP D +F L+G+ +TV + R F Y+ D+V G +
Sbjct: 211 RIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQT---RSFCYVSDMVDGLI 267
Query: 323 GSLD-TSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHAN 381
++ GP N+GN T+ +L ++ + + ++E + D +
Sbjct: 268 RLMEGNDTGP-----INIGNPGEFTMVELAETVKELINPSIEIKMVENTPD-DPRQRKPD 321
Query: 382 ISSAQKEFGYRPTTDLQTGL 401
IS A++ G+ P L+ GL
Sbjct: 322 ISKAKEVLGWEPKVKLREGL 341
>ZFIN|ZDB-GENE-020419-37 [details] [associations]
symbol:uxs1 "UDP-glucuronic acid decarboxylase 1"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
[GO:0030206 "chondroitin sulfate biosynthetic process"
evidence=IMP] [GO:0015012 "heparan sulfate proteoglycan
biosynthetic process" evidence=IGI;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IGI;IMP] [GO:0050650 "chondroitin
sulfate proteoglycan biosynthetic process" evidence=IGI;IMP]
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 ZFIN:ZDB-GENE-020419-37 GO:GO:0016021
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030198 GO:GO:0032580 GO:GO:0051216 GO:GO:0001503
GO:GO:0015012 GO:GO:0030206 GeneTree:ENSGT00530000063128
EMBL:AF506235 EMBL:BC074058 IPI:IPI00494152 RefSeq:NP_775349.1
UniGene:Dr.79684 ProteinModelPortal:Q6GMI9 SMR:Q6GMI9 STRING:Q6GMI9
Ensembl:ENSDART00000078525 GeneID:192315 KEGG:dre:192315 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 InParanoid:Q6GMI9 KO:K08678
OrthoDB:EOG4ZW5B0 NextBio:20797152 ArrayExpress:Q6GMI9 Bgee:Q6GMI9
GO:GO:0048040 GO:GO:0033320 Uniprot:Q6GMI9
Length = 418
Score = 216 (81.1 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 85/323 (26%), Positives = 143/323 (44%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
+L+TG AGFVG+H++ L G V +DNF K+ + + + +I D+
Sbjct: 89 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDV- 143
Query: 153 DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
+ L+ + + HLA+ A M NP + +N G + +L K + +
Sbjct: 144 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 195
Query: 213 VWASSSSVYGLNENVPFSEA--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
+ AS+S VYG E P +E + P + Y K+ E + + Y G+ + R
Sbjct: 196 LLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 255
Query: 269 FFTVYGP-WGRPDMAYFS-FTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLD 326
F +G D S F LQG+ +TVY + R F Y+ D+V G L SL
Sbjct: 256 IFNTFGSRMHMNDGRVVSNFILQALQGEALTVYGSGSQT---RAFQYVSDLVNG-LVSLM 311
Query: 327 TSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHA-NISSA 385
S +P NLGN T+ + +++ V ++ ++ +P D P +I A
Sbjct: 312 NSNISSPV---NLGNPEEHTILEFAQLIKS--LVASRSHIQFLPEAQDDPQRRRPDIRKA 366
Query: 386 QKEFGYRPTTDLQTGLKKFVRWY 408
+ G+ P L+ GL K ++++
Sbjct: 367 KLLLGWEPVVPLEEGLNKTIQYF 389
>TAIR|locus:2015253 [details] [associations]
symbol:UGE3 "UDP-D-glucose/UDP-D-galactose 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IPI] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 EMBL:CP002684 GO:GO:0009555 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:AY085887 EMBL:BT024882 EMBL:AK117913
IPI:IPI00534992 RefSeq:NP_564811.1 UniGene:At.36168
ProteinModelPortal:Q8LDN8 SMR:Q8LDN8 STRING:Q8LDN8 PRIDE:Q8LDN8
EnsemblPlants:AT1G63180.1 GeneID:842622 KEGG:ath:AT1G63180
TAIR:At1g63180 InParanoid:Q8LDN8 OMA:FWADASL PhylomeDB:Q8LDN8
Genevestigator:Q8LDN8 Uniprot:Q8LDN8
Length = 351
Score = 212 (79.7 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 86/323 (26%), Positives = 147/323 (45%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKAL---LNNHGVFVIE 148
++LVTG AGF+GTH + L +G V +DN +N ++ + R+ + L+ F +
Sbjct: 8 NILVTGGAGFIGTHTVVQLLNQGFKVTIIDNLDNSVVEAVHRVRELVGPDLSTKLEFNL- 66
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
GD+ + + KLF F V+H A V ++ NP Y +N+ G + L E N
Sbjct: 67 GDLRNKGDIEKLFSNQRFDAVIHFAGLKAVGESVGNPRRYFDNNLVGTINLYETMAKYNC 126
Query: 209 QPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYG-LSITGL 267
+ +V++SS++VYG E VP E D Q + Y TK EEIA + I L
Sbjct: 127 K-MMVFSSSATVYGQPEIVPCVE-DFELQAMNPYGRTKLFLEEIARDIHAAEPEWKIILL 184
Query: 268 RFFTVYG----------PWGRPDMAYFSFTRNILQGK-P-ITVYRGKNHVDL----ARDF 311
R+F G P G P+ + + + G+ P + V+ G ++ + RD+
Sbjct: 185 RYFNPVGAHESGRIGEDPKGIPNNL-MPYIQQVAVGRLPELNVF-GHDYPTMDGSAVRDY 242
Query: 312 TYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEM-P 370
++ D+ G + +L+ + N ++ ++ K KK I++ P
Sbjct: 243 IHVMDLADGHVAALNKLFSDSKIGC-TAYNLGTGQGTSVLEMVSSFEKASGKKIPIKLCP 301
Query: 371 GN-GDVPFTHANISSAQKEFGYR 392
GD +A+ A+KE G++
Sbjct: 302 RRAGDATAVYASTQKAEKELGWK 324
>TAIR|locus:2078206 [details] [associations]
symbol:UXS5 "UDP-XYL synthase 5" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;TAS] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
EMBL:AL133298 HSSP:P27830 HOGENOM:HOG000168004 EMBL:AY072098
EMBL:AY096586 EMBL:AY087118 EMBL:AK228600 EMBL:AK317497
IPI:IPI00534151 PIR:T45701 RefSeq:NP_001030820.1 RefSeq:NP_190228.1
UniGene:At.43598 ProteinModelPortal:Q9SN95 SMR:Q9SN95 STRING:Q9SN95
PRIDE:Q9SN95 EnsemblPlants:AT3G46440.1 EnsemblPlants:AT3G46440.2
GeneID:823794 KEGG:ath:AT3G46440 TAIR:At3g46440 InParanoid:Q9SN95
OMA:QISTQNR PhylomeDB:Q9SN95 ProtClustDB:CLSN2683686
ArrayExpress:Q9SN95 Genevestigator:Q9SN95 Uniprot:Q9SN95
Length = 341
Score = 208 (78.3 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 79/320 (24%), Positives = 137/320 (42%)
Query: 91 MSVLVTGAAGFVGTH-VSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVF-VIE 148
M +L++G AGF+G+H V ++ + V+ DN Y+ S +K + H F +I
Sbjct: 29 MRILISGGAGFIGSHLVDKLMENEKNEVIVADN---YFTGSKDNLKKWI--GHPRFELIR 83
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
D+ + L + + HLA A + NP + +N+ G + +L K
Sbjct: 84 HDVTEPLL-------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA 136
Query: 209 QPSIVWASSSSVYG--LNENVPFSEADRTDQPA--SLYAATKKAGEEIAHTYNHIYGLSI 264
+ I+ S+S VYG L P S + S Y K+ E + Y+ +G+ I
Sbjct: 137 R--ILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 194
Query: 265 TGLRFFTVYGPWGRPD--MAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCL 322
R F YGP D +F L+G+ +TV + R F Y+ D+V G +
Sbjct: 195 RIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQT---RSFCYVSDMVDGLM 251
Query: 323 GSLD-TSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHAN 381
++ GP N+GN T+ +L ++ + + ++E + D +
Sbjct: 252 RLMEGDDTGP-----INIGNPGEFTMVELAETVKELINPSIEIKMVENTPD-DPRQRKPD 305
Query: 382 ISSAQKEFGYRPTTDLQTGL 401
I+ A++ G+ P L+ GL
Sbjct: 306 ITKAKEVLGWEPKVKLREGL 325
>FB|FBgn0035848 [details] [associations]
symbol:CG7979 species:7227 "Drosophila melanogaster"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K08678 OMA:LGHENFE
EMBL:AY051913 RefSeq:NP_648182.1 UniGene:Dm.20044 HSSP:P93031
SMR:Q9VSE8 STRING:Q9VSE8 EnsemblMetazoa:FBtr0076690 GeneID:38911
KEGG:dme:Dmel_CG7979 UCSC:CG7979-RA FlyBase:FBgn0035848
InParanoid:Q9VSE8 OrthoDB:EOG45HQCS GenomeRNAi:38911 NextBio:810971
Uniprot:Q9VSE8
Length = 441
Score = 210 (79.0 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 86/324 (26%), Positives = 141/324 (43%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
+L+TG AGFVG+H+ L +G V+ +DNF K+ + L + +I DI
Sbjct: 118 ILITGGAGFVGSHLVDDLMVQGHEVIVVDNFFT----GRKRNVEHWLGHENFELIHHDI- 172
Query: 153 DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
+ LF + + HLA+ A + M NP + +N G + +L K +
Sbjct: 173 ----VNPLF--IEIDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLGLAKRV--MAKV 224
Query: 213 VWASSSSVYGLNENVPFSEA--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
+ AS+S VYG P E + P + Y K+ E +++ Y + + R
Sbjct: 225 LIASTSEVYGDPTVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAYAKQEKVQVRVAR 284
Query: 269 FFTVYGP-WGRPDMAYFS-FTRNILQGKPITVY-RGKNHVDLARDFTYIDDIVKGCLGSL 325
F YGP D S F L+ + ITVY GK R F Y+ D+V G + +L
Sbjct: 285 IFNTYGPRMHMNDGRVVSNFILQALRNETITVYGNGKQ----TRSFQYVSDLVDGMI-AL 339
Query: 326 DTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHA-NISS 384
S P NLGN T+ + I+++ V + + D P +I+
Sbjct: 340 MASNYTQPV---NLGNPVEQTIGEFAEIIKK--LVGGPSVIKQSKAMEDDPQRRKPDITR 394
Query: 385 AQKEFGYRPTTDLQTGLKKFVRWY 408
A++ + P L+TGL++ + ++
Sbjct: 395 ARQLLHWEPKVPLETGLQRTISYF 418
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 206 (77.6 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 90/336 (26%), Positives = 156/336 (46%)
Query: 92 SVLVTGAAGFVGTH-VSLALKKRGD-GVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
+++VTG AGF+G++ V D V LD Y + + L + V ++ G
Sbjct: 6 NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLT--YAGNRANLEEILGDR--VELVVG 61
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
DI D++L+ KL A ++H AA++ ++++P ++++N G LLEA + + +
Sbjct: 62 DIADSELVDKL--AAKADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAARKYDIR 119
Query: 210 PSIVWASSSSVYG---LNENVP-FSE-------ADRTDQPASLYAATKKAGEEIAHTYNH 258
V S+ VYG L E++P E A+ P+S Y++TK A + I +
Sbjct: 120 FHHV--STDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVR 177
Query: 259 IYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQG-KPITVYRGKNHVDLARDFTYIDDI 317
+G+ T YGP+ + NIL G KP GKN RD+ + +D
Sbjct: 178 SFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKN----VRDWIHTNDH 233
Query: 318 VKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVK-AKKNVIEMPGNGDVP 376
G L Y I G + V +L ILE+ + K A +V + G+ D+
Sbjct: 234 STGVWAILTKGRIGETYLIGADGEKNNKEVLEL--ILEKMSQPKNAYDHVTDRAGH-DLR 290
Query: 377 FTHANISSAQKEFGYRPT-TDLQTGLKKFVRWYLSY 411
+ + + ++E G++P T+ + GL+ ++WY +
Sbjct: 291 YA-IDSTKLREELGWKPQFTNFEEGLEDTIKWYTEH 325
>TIGR_CMR|CPS_2147 [details] [associations]
symbol:CPS_2147 "UDP-glucose 4-epimerase" species:167879
"Colwellia psychrerythraea 34H" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_268872.1 ProteinModelPortal:Q482Z5 SMR:Q482Z5
STRING:Q482Z5 GeneID:3518989 KEGG:cps:CPS_2147 PATRIC:21467411
OMA:QTAMGIR BioCyc:CPSY167879:GI48-2217-MONOMER Uniprot:Q482Z5
Length = 340
Score = 204 (76.9 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 83/340 (24%), Positives = 152/340 (44%)
Query: 91 MSVLVTGAAGFVGTH--VSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIE 148
MS+L+TG G++G+H V L + +V +DN +N L++ ++ + N V I+
Sbjct: 1 MSLLITGGTGYIGSHTVVELLQSTKEQEIVIVDNLSNSSTKVLERIKQ--ITNKTVTFIK 58
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
D+ D L ++F+ V+H A V + + P +Y +N++G +TLL
Sbjct: 59 ADVCDENALEQVFNEHKIEAVIHFAGLKAVGESNEIPLAYYQNNVSGTITLLRVMAKYQV 118
Query: 209 QPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTY-NHIYGLSITGL 267
+ ++V++SS++VYG N + P +E T + Y TK E + SI L
Sbjct: 119 K-NLVFSSSATVYGNNVS-PLNETMATSA-TNPYGQTKLMVEHVLFDLAKSDASWSIACL 175
Query: 268 RFFTVYG----------PWGRPDMAYFSFTRNILQGK--PITVYRGKNHVDL----ARDF 311
R+F G P G P+ + + G+ + ++ G ++ RD+
Sbjct: 176 RYFNPIGAHQSGLIGENPNGIPNNL-LPYVAQVAVGRLEQLQIF-GDDYDTQDGTGVRDY 233
Query: 312 TYIDDIVKG---CLGSLDTSAGPAP-YRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVI 367
++ D+ +G L SL + G + NLG + +V ++VN + K V+
Sbjct: 234 IHVVDLAQGHVKALESLGHAKGTVKGCQAINLGTGNGTSVLEIVNTFKDISKQDIPYQVV 293
Query: 368 EMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
GD+ +A+ S A + ++ DL ++ RW
Sbjct: 294 PRRA-GDLATVYADASLANELLDWQAKLDLTAMIQDTWRW 332
>UNIPROTKB|Q6T1X6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:143495
"Aneurinibacillus thermoaerophilus" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AY442352
PDB:2PK3 PDBsum:2PK3 ProteinModelPortal:Q6T1X6 SMR:Q6T1X6
BRENDA:1.1.1.281 EvolutionaryTrace:Q6T1X6 GO:GO:0033705
Uniprot:Q6T1X6
Length = 309
Score = 201 (75.8 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 81/325 (24%), Positives = 150/325 (46%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M L+TG AGFVG +++ L ++ V G NN +A L N V +I D
Sbjct: 1 MRALITGVAGFVGKYLANHLTEQNVEVFGTSR-NN----------EAKLPN--VEMISLD 47
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I D++ + K+ + ++ HLAA++ V+ + N +N+ G + +L+A + +N
Sbjct: 48 IMDSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDC 107
Query: 211 SIVWASSSSVYG--LNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
I+ SS YG L E P SE ++ +P S Y +K + +A Y YG+ I R
Sbjct: 108 RILTIGSSEEYGMILPEESPVSEENQL-RPMSPYGVSKASVGMLARQYVKAYGMDIIHTR 166
Query: 269 FFTVYGPWGRPDMAYFSFTRNILQ---GKPITVYRGKNHVDLARDFTYIDDIVKGCLGSL 325
F GP F + I+ K + + N ++ RDFT + DIV+ L
Sbjct: 167 TFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGN-LEAVRDFTDVRDIVQAYW--L 223
Query: 326 DTSAGPAPYRIFNLGNTSPVTVPKLVNIL--ERHLKVKAKKNVIEMPGNGDVPFTHANIS 383
+ G ++N+ + + ++++L ++K+ + N +++ + +VP +
Sbjct: 224 LSQYGKTG-DVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQLRPS-EVPTLIGSNK 281
Query: 384 SAQKEFGYRPTTDLQTGLKKFVRWY 408
+ G++P L+ L + ++ Y
Sbjct: 282 RLKDSTGWKPRIPLEKSLFEILQSY 306
>DICTYBASE|DDB_G0275295 [details] [associations]
symbol:galE "UDP-glucose 4-epimerase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 dictyBase:DDB_G0275295
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0044237
eggNOG:COG1087 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P04397 OMA:ADKAWNA RefSeq:XP_643834.1
ProteinModelPortal:Q553X7 SMR:Q553X7 STRING:Q553X7
EnsemblProtists:DDB0231575 GeneID:8619881 KEGG:ddi:DDB_G0275295
ProtClustDB:CLSZ2729193 Uniprot:Q553X7
Length = 344
Score = 203 (76.5 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 87/340 (25%), Positives = 150/340 (44%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
++VTG AG++G+H + L + G V +DN +N ++K+ + + DI
Sbjct: 8 IMVTGGAGYIGSHTVIELIEAGYTPVIVDNLSNSSLEAIKRVES--ITGKEIEFHHVDIM 65
Query: 153 DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
+ K L ++F+ V+H A V + + P Y ++NIAG +TLL + +
Sbjct: 66 NEKALDEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMDKHRVK-KL 124
Query: 213 VWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTY-NHIYGLSITGLRFFT 271
V++SS++VYG VP +E D + Y TK E I + LR+F
Sbjct: 125 VFSSSATVYGDPHTVPITE-DFPLSATNPYGRTKLYVEGILQDLCASDPEWNCIMLRYFN 183
Query: 272 VYG--PWGR--------PDMAYFSFTRNILQGKPITVYRGK--NHVDLA--RDFTYIDDI 317
G P G P+ T+ + +PI G N D RDF ++ D+
Sbjct: 184 PVGAHPSGLIGEDPKDIPNNLMPYVTQTAIGKRPILSIFGNDYNTPDGTGVRDFIHVVDL 243
Query: 318 VKGCLGSLDTSAGPAPYRI-FNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVP 376
KG + +L + + +NLG +V ++V L++ + ++ GDV
Sbjct: 244 AKGHISALSSLHSKKQGCVAYNLGTGRGYSVLEMVGALKQASHKEIPYQIVSRR-KGDVA 302
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRWY-LSYYGYN 415
+ A+ S A KE G++ T + + +W L+ GY+
Sbjct: 303 SSFADPSKALKELGWKATHNQDDMCRDAWKWQSLNPNGYS 342
>TIGR_CMR|SO_3188 [details] [associations]
symbol:SO_3188 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 HSSP:P26391 RefSeq:NP_718744.1
ProteinModelPortal:Q8ECF4 SMR:Q8ECF4 GeneID:1170881
KEGG:son:SO_3188 PATRIC:23526058 OMA:NAARATW Uniprot:Q8ECF4
Length = 375
Score = 133 (51.9 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 46/179 (25%), Positives = 78/179 (43%)
Query: 238 PASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPIT 297
P+S Y+A+K + + + + YG YGP+ P+ N L+GKP+
Sbjct: 181 PSSPYSASKASSDHLVRAWLRTYGFPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLP 240
Query: 298 VYRGKNHVDLARDFTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLV-NILER 356
+Y GK D RD+ Y++D + + Y I + V + + +IL+
Sbjct: 241 IY-GKG--DQIRDWLYVEDHARALFKVVTEGKVGETYNIGGHNEKRNLEVVQTICSILDS 297
Query: 357 HLKVK---AKK--NVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLS 410
+ A++ V + PG+ A SA E ++P +TGL+K V WYL+
Sbjct: 298 LVPKNTPYAEQIAYVADRPGHDRRYAIDATKMSA--ELDWQPQETFETGLRKTVEWYLA 354
Score = 117 (46.2 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 37/115 (32%), Positives = 56/115 (48%)
Query: 91 MSVLVTGAAGFVGTHVSL-ALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
M +LVTG AGF+G+ V + D VV +D Y +L+ + F +
Sbjct: 1 MKILVTGGAGFIGSAVVRHIIGNTQDCVVNVDKLT--YAGNLESLTSVADSPRYTFE-KV 57
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACK 204
DI D L ++F VMHLAA++ V ++ ++ +NI G TLLEA +
Sbjct: 58 DICDRTELERVFSLHQPDAVMHLAAESHVDRSITGSADFIQTNIVGTYTLLEAAR 112
>CGD|CAL0000448 [details] [associations]
symbol:GAL10 species:5476 "Candida albicans" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0019388
"galactose catabolic process" evidence=IEP;IGI;IMP] [GO:0001403
"invasive growth in response to glucose limitation" evidence=IMP]
[GO:0009272 "fungal-type cell wall biogenesis" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0042149 "cellular response to glucose starvation" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0060257 "negative regulation of
flocculation" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IEA] [GO:0042125 "protein galactosylation"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000448
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0034599
GO:GO:0030246 GO:GO:0042149 GO:GO:0009272 GO:GO:0044237
SUPFAM:SSF74650 GO:GO:0001403 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AACQ01000118 EMBL:AACQ01000119 Gene3D:2.70.98.10 GO:GO:0019388
GO:GO:0060257 GO:GO:1900429 eggNOG:COG2017 KO:K15917
RefSeq:XP_713732.1 RefSeq:XP_713766.1 ProteinModelPortal:Q59VY6
SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583 GeneID:3644609
KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672 Uniprot:Q59VY6
Length = 675
Score = 208 (78.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 64/190 (33%), Positives = 97/190 (51%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNY-YDPSLKKARKALLNNHGVFVIEGDI 151
+LVTG AG++G+H + L G VV +DN +N YD + + ++ H F + DI
Sbjct: 6 ILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAVARI--EFIVKQHVPFY-DVDI 62
Query: 152 NDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPS 211
+ + L K+F + V+H AA V + + P +Y +N++G V LLE CK AN +
Sbjct: 63 RNYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCK-ANDVKT 121
Query: 212 IVWASSSSVYG----LNEN--VPFSEADRTDQPASLYAATKKAGEEIAHT-YNHIYGLSI 264
IV++SS++VYG +N +P E D P + Y TK E I YN +
Sbjct: 122 IVFSSSATVYGDVTRFGDNSMIPIPEHCPMD-PTNPYGRTKFIIESILKDIYNSDDAWKV 180
Query: 265 TGLRFFTVYG 274
LR+F G
Sbjct: 181 AILRYFNPIG 190
>UNIPROTKB|Q59VY6 [details] [associations]
symbol:GAL10 "Putative uncharacterized protein GAL10"
species:237561 "Candida albicans SC5314" [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0019388
"galactose catabolic process" evidence=IGI;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0034599 "cellular response
to oxidative stress" evidence=IMP] [GO:0042149 "cellular response
to glucose starvation" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0060257 "negative regulation of flocculation" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008183
InterPro:IPR011013 InterPro:IPR014718 Pfam:PF01263 Pfam:PF01370
InterPro:IPR016040 CGD:CAL0000448 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0034599 GO:GO:0030246 GO:GO:0042149
GO:GO:0009272 GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0001403
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AACQ01000118 EMBL:AACQ01000119
Gene3D:2.70.98.10 GO:GO:0019388 GO:GO:0060257 GO:GO:1900429
eggNOG:COG2017 KO:K15917 RefSeq:XP_713732.1 RefSeq:XP_713766.1
ProteinModelPortal:Q59VY6 SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583
GeneID:3644609 KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672
Uniprot:Q59VY6
Length = 675
Score = 208 (78.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 64/190 (33%), Positives = 97/190 (51%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNY-YDPSLKKARKALLNNHGVFVIEGDI 151
+LVTG AG++G+H + L G VV +DN +N YD + + ++ H F + DI
Sbjct: 6 ILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAVARI--EFIVKQHVPFY-DVDI 62
Query: 152 NDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPS 211
+ + L K+F + V+H AA V + + P +Y +N++G V LLE CK AN +
Sbjct: 63 RNYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCK-ANDVKT 121
Query: 212 IVWASSSSVYG----LNEN--VPFSEADRTDQPASLYAATKKAGEEIAHT-YNHIYGLSI 264
IV++SS++VYG +N +P E D P + Y TK E I YN +
Sbjct: 122 IVFSSSATVYGDVTRFGDNSMIPIPEHCPMD-PTNPYGRTKFIIESILKDIYNSDDAWKV 180
Query: 265 TGLRFFTVYG 274
LR+F G
Sbjct: 181 AILRYFNPIG 190
>POMBASE|SPBPB2B2.12c [details] [associations]
symbol:gal10 species:4896 "Schizosaccharomyces pombe"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IDA]
[GO:0004034 "aldose 1-epimerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=ISS]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0042125
"protein galactosylation" evidence=IMP] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 PomBase:SPBPB2B2.12c GO:GO:0005829 GO:GO:0005634
GO:GO:0033554 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030246 EMBL:CU329671 GenomeReviews:CU329671_GR
SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 RefSeq:NP_596858.1 ProteinModelPortal:Q9HDU3
STRING:Q9HDU3 EnsemblFungi:SPBPB2B2.12c.1 GeneID:2541411
KEGG:spo:SPBPB2B2.12c eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T BRENDA:5.1.3.2 NextBio:20802517
GO:GO:0004034 GO:GO:0033499 GO:GO:0042125 InterPro:IPR018052
PROSITE:PS00545 Uniprot:Q9HDU3
Length = 713
Score = 208 (78.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 61/190 (32%), Positives = 98/190 (51%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNF-NNYYDPSLKKARKALLNNHGVFVIEGDI 151
+LVTG AG++G+H + L G V+ +DN N+ YD AR + + + D+
Sbjct: 8 ILVTGGAGYIGSHTVIELINHGYKVIIVDNLCNSCYDAV---ARVEFIVRKSIKFFKLDL 64
Query: 152 NDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPS 211
D + LA++FD V+H AA V +M+ P Y +NI G +TLL + + +
Sbjct: 65 RDKEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMREHRVK-T 123
Query: 212 IVWASSSSVYG----LNENVPFSEADRTDQPASLYAATKKAGEEIA---HTYNHIYGLSI 264
+V++SS++VYG + +P E+ D P + Y TK A E I HT ++ + +I
Sbjct: 124 VVFSSSATVYGDATRFDNMIPIPESCPND-PTNPYGKTKYAIENIIKDLHTSDNTWRGAI 182
Query: 265 TGLRFFTVYG 274
LR+F G
Sbjct: 183 --LRYFNPIG 190
>WB|WBGene00008132 [details] [associations]
symbol:gale-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0042335
"cuticle development" evidence=IGI;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0042335 GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:THAPIDA EMBL:Z99709 GeneID:173171
KEGG:cel:CELE_C47B2.6 UCSC:C47B2.6b CTD:173171 NextBio:878565
RefSeq:NP_001021052.1 ProteinModelPortal:Q564Q1 SMR:Q564Q1
STRING:Q564Q1 PRIDE:Q564Q1 EnsemblMetazoa:C47B2.6b
WormBase:C47B2.6b InParanoid:Q564Q1 ArrayExpress:Q564Q1
Uniprot:Q564Q1
Length = 349
Score = 200 (75.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 55/169 (32%), Positives = 85/169 (50%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNY------YDPSLKKARKALLNNHGV 144
M +LVTGAAGF+G+H L L G V+ +DNF N + ++ R A L V
Sbjct: 1 MHILVTGAAGFIGSHTVLELLNSGYTVLCIDNFANAISVTDEHGNAISLKRVAQLTGKDV 60
Query: 145 FVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACK 204
D+ D L K+F F ++HLAA V ++ P Y +N+ + L++ C
Sbjct: 61 PFQNVDVCDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMCL 120
Query: 205 SANPQPSIVWASSSSVYGLNENVPFSEADRTDQP-ASLYAATKKAGEEI 252
N + + V++SS++VYG +P +E +T Q + Y TK E+I
Sbjct: 121 KYNVK-NFVFSSSATVYGPPSELPITEKSQTGQGITNPYGQTKYMMEQI 168
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 76/300 (25%), Positives = 129/300 (43%)
Query: 130 SLKKARKALLNNHGVFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYV 189
SLK R A L V D+ D L K+F F ++HLAA V ++ P Y
Sbjct: 48 SLK--RVAQLTGKDVPFQNVDVCDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYY 105
Query: 190 HSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAG 249
+N+ + L++ C N + + +S++ +E ++ + Y TK
Sbjct: 106 SNNLVASLNLIQMCLKYNVKNFVFSSSATVYGPPSELPITEKSQTGQGITNPYGQTKYMM 165
Query: 250 EEIAHTYNHIYG-LSITGLRFFTVYG----------PWGRPD--MAYFSFTRNILQGK-P 295
E+I ++ LR+F G P G P+ M Y S + GK P
Sbjct: 166 EQILIDVGKANPEWNVVLLRYFNPVGAHKSGLIGEDPKGVPNNLMPYVS---QVAIGKLP 222
Query: 296 I-TVYRGK-NHVDLA--RDFTYIDDIVKGCLGSLDT--SAGPAPYRIFNLGNTSPVTVPK 349
+ T+Y + + VD RD+ ++ D+ KG + + D + G I+NLG +V +
Sbjct: 223 VLTIYGDQFDTVDGTGVRDYIHVVDLAKGHVKAFDRIKTVGNIGTEIYNLGTGVGYSVRQ 282
Query: 350 LVNILERHLKVKAKKNVIEM--PGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
+V+ L+ KV + +++ P GDV + + S AQ++ G+R T L+ W
Sbjct: 283 MVDALK---KVSGRDIPVKIGVPRPGDVASVYCDPSLAQEKLGWRAETGLEEMCADLWNW 339
>UNIPROTKB|Q4QRB0 [details] [associations]
symbol:Gale "Gale protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784 EMBL:CH473968
GeneTree:ENSGT00530000063128 CTD:2582 HOVERGEN:HBG001396
UniGene:Rn.29908 EMBL:BC097293 IPI:IPI00882523 RefSeq:NP_542961.2
SMR:Q4QRB0 STRING:Q4QRB0 Ensembl:ENSRNOT00000013322 GeneID:114860
KEGG:rno:114860 InParanoid:Q4QRB0 NextBio:618919
Genevestigator:Q4QRB0 Uniprot:Q4QRB0
Length = 348
Score = 198 (74.8 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 81/295 (27%), Positives = 129/295 (43%)
Query: 130 SLKKARKALLNNHGVFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYV 189
SL++ ++ L V E DI D L LF F V+H A V ++Q P Y
Sbjct: 48 SLRRVQE--LTGRSVEFEEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYY 105
Query: 190 HSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAG 249
N+ G + LLE + A+ S+V++SS++VYG + +P EA T + Y +K
Sbjct: 106 RVNLTGTIQLLEIMR-AHGVKSLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFI 164
Query: 250 EEIAHTYNHI-YGLSITGLRFFTVYG----------PWGRPD--MAYFSFTRNILQGKPI 296
EE+ + LR+F G P G P+ M Y S I + + +
Sbjct: 165 EEMIQDLCRADTAWNAVLLRYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVA-IGRREAL 223
Query: 297 TVYRGKNHVDL----ARDFTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVN 352
V+ G ++ RD+ ++ D+ KG + +L RI+NLG + +V ++V
Sbjct: 224 NVF-GDDYATEDGTGVRDYIHVVDLAKGHIAALKKLKEQCGCRIYNLGTGTGYSVLQMVQ 282
Query: 353 ILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
+E+ K V+ GDV +AN S A +E G+ L + RW
Sbjct: 283 AMEKASGKKIPYKVVARR-EGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 336
Score = 197 (74.4 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 56/164 (34%), Positives = 85/164 (51%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYY--DPSLKKARKAL--LNNHGVFVIE 148
VLVTG AG++G+H L L + G V +DNF+N + S+ ++ + + L V E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSVEFEE 64
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
DI D L LF F V+H A V ++Q P Y N+ G + LLE + A+
Sbjct: 65 MDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMR-AHG 123
Query: 209 QPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEI 252
S+V++SS++VYG + +P EA T + Y +K EE+
Sbjct: 124 VKSLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM 167
>MGI|MGI:1921496 [details] [associations]
symbol:Gale "galactose-4-epimerase, UDP" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISO;IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IDA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0019388
"galactose catabolic process" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 MGI:MGI:1921496 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:BC027438
IPI:IPI00153129 RefSeq:NP_848476.1 UniGene:Mm.247946
ProteinModelPortal:Q8R059 SMR:Q8R059 STRING:Q8R059
PhosphoSite:Q8R059 PaxDb:Q8R059 PRIDE:Q8R059
Ensembl:ENSMUST00000102540 Ensembl:ENSMUST00000102541 GeneID:74246
KEGG:mmu:74246 InParanoid:Q8R059 ChiTaRS:GALE NextBio:340230
Bgee:Q8R059 CleanEx:MM_GALE Genevestigator:Q8R059
GermOnline:ENSMUSG00000028671 Uniprot:Q8R059
Length = 347
Score = 197 (74.4 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 55/164 (33%), Positives = 86/164 (52%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYY--DPSLKKARKAL--LNNHGVFVIE 148
VLVTG AG++G+H L L + G V +DNF+N + S+ ++ + + L V E
Sbjct: 4 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGEDSMPESLRRVQELTGRSVEFEE 63
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
DI D L LF +F V+H A V ++Q P Y N+ G + LLE + A+
Sbjct: 64 MDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMR-AHG 122
Query: 209 QPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEI 252
++V++SS++VYG + +P EA T + Y +K EE+
Sbjct: 123 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM 166
Score = 193 (73.0 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 79/295 (26%), Positives = 129/295 (43%)
Query: 130 SLKKARKALLNNHGVFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYV 189
SL++ ++ L V E DI D L LF +F V+H A V ++Q P Y
Sbjct: 47 SLRRVQE--LTGRSVEFEEMDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYY 104
Query: 190 HSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAG 249
N+ G + LLE + A+ ++V++SS++VYG + +P EA T + Y +K
Sbjct: 105 RVNLTGTIQLLEIMR-AHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFI 163
Query: 250 EEIAHTYNHI-YGLSITGLRFFTVYG----------PWGRPD--MAYFSFTRNILQGKPI 296
EE+ + LR+F G P G P+ M Y S I + + +
Sbjct: 164 EEMIRDLCRADTAWNAVLLRYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVA-IGRREAL 222
Query: 297 TVYRGKNHVDL----ARDFTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVN 352
V+ G ++ RD+ ++ D+ KG + +L R +NLG + +V ++V
Sbjct: 223 NVF-GDDYATEDGTGVRDYIHVVDLAKGHIAALKKLKEQCGCRTYNLGTGTGYSVLQMVQ 281
Query: 353 ILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
+E+ K V+ GDV +AN S A +E G+ L + RW
Sbjct: 282 AMEKASGKKIPYKVVARR-EGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 335
>SGD|S000000223 [details] [associations]
symbol:GAL10 "UDP-glucose-4-epimerase" species:4932
"Saccharomyces cerevisiae" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IMP;IDA] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IMP;IDA] [GO:0019318 "hexose metabolic
process" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 SGD:S000000223 GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030246 EMBL:BK006936
GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T GO:GO:0004034 GO:GO:0033499
InterPro:IPR018052 PROSITE:PS00545 EMBL:Z35888 EMBL:X81324
EMBL:K02115 EMBL:M12348 EMBL:K01609 PIR:S45875 RefSeq:NP_009575.1
PDB:1Z45 PDBsum:1Z45 ProteinModelPortal:P04397 SMR:P04397
DIP:DIP-4891N MINT:MINT-526001 STRING:P04397 PeptideAtlas:P04397
PRIDE:P04397 EnsemblFungi:YBR019C GeneID:852307 KEGG:sce:YBR019C
CYGD:YBR019c GeneTree:ENSGT00530000063128 EvolutionaryTrace:P04397
NextBio:970981 Genevestigator:P04397 GermOnline:YBR019C
Uniprot:P04397
Length = 699
Score = 197 (74.4 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 64/183 (34%), Positives = 87/183 (47%)
Query: 82 SAQIH-RSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNY-YDPSLKKARKALL 139
+AQ+ S VLVTG AG++G+H + L + G V DN +N YD AR +L
Sbjct: 2 TAQLQSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYD---SVARLEVL 58
Query: 140 NNHGVFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTL 199
H + E D+ D K L K+F V+H A V + Q P Y H+NI G V L
Sbjct: 59 TKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVL 118
Query: 200 LEACKSANPQPSIVWASSSSVYG----LNENVPFSEADRTDQPASLYAATKKAGEEIAHT 255
LE + N V++SS++VYG +P E P + Y TK A E I +
Sbjct: 119 LELMQQYNVS-KFVFSSSATVYGDATRFPNMIPIPEECPLG-PTNPYGHTKYAIENILND 176
Query: 256 -YN 257
YN
Sbjct: 177 LYN 179
Score = 50 (22.7 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 25/115 (21%), Positives = 47/115 (40%)
Query: 309 RDFTYIDDIVKGCLGSLDT----SAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKK 364
RD+ ++ D+ KG + +L + R +NLG+ TV ++ + + +
Sbjct: 246 RDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPY 305
Query: 365 NVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSY-YGYN-RG 417
V GDV A A++E ++ ++ K +W +GY RG
Sbjct: 306 KVTGRRA-GDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPFGYQLRG 359
>WB|WBGene00018737 [details] [associations]
symbol:F53B1.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0040017
GeneTree:ENSGT00530000063128 EMBL:FO081052 GO:GO:0008460
eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:AYNDARY HSSP:P26391 PIR:T16444
RefSeq:NP_508390.1 UniGene:Cel.908 ProteinModelPortal:Q20697
SMR:Q20697 STRING:Q20697 PaxDb:Q20697 EnsemblMetazoa:F53B1.4
GeneID:180525 KEGG:cel:CELE_F53B1.4 UCSC:F53B1.4 CTD:180525
WormBase:F53B1.4 InParanoid:Q20697 NextBio:909738 Uniprot:Q20697
Length = 342
Score = 196 (74.1 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 80/335 (23%), Positives = 135/335 (40%)
Query: 93 VLVTGAAGFVGT-HVSLALKK-RGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
VL+TG GF+G+ +++ K + + D + S K + + +E
Sbjct: 11 VLITGGCGFIGSNYINFTFNKWKNTKFINYDKLA--FGASPLHVEKEIRESPRYKFVEAA 68
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ- 209
+ D L K V+H AA V + + + NI TLLE+ ++ +
Sbjct: 69 LEDQPTLIKTLQENEVDMVIHFAAITHVDESYSDRIGTIQDNIISTTTLLESIVNSPYKG 128
Query: 210 -PSIVWASSSSVYG--LNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITG 266
+V S+ VYG + P SE+ P + YAA+K A E + +Y H Y L
Sbjct: 129 VKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWHSYKLPYVM 188
Query: 267 LRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLG-SL 325
+R VYGP FT+ L GKP + H R + Y++D + +L
Sbjct: 189 VRMNNVYGPRQIHTKLIPKFTKLALDGKPYPLMGDGLHT---RSWMYVEDCSEAITRVAL 245
Query: 326 DTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKV-KAKKNVIEMPGNGDVPFT------ 378
+ + G I+N+G +T +L ++ H V K P +P
Sbjct: 246 EGTLG----EIYNIGTDFEMTNIELTKMI--HFTVSKLLNREPTAPTFAPIPDRPYHDRR 299
Query: 379 -HANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYY 412
+ + S + G++ TT GL K + +Y+ +
Sbjct: 300 YYIDFSKIRNAMGWQCTTPFSEGLMKTIDYYVKLH 334
>TAIR|locus:2150441 [details] [associations]
symbol:GME ""GDP-D-mannose 3',5'-epimerase"" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0047918 "GDP-mannose 3,5-epimerase activity" evidence=ISS;IDA]
[GO:0019853 "L-ascorbic acid biosynthetic process" evidence=TAS]
[GO:0051287 "NAD binding" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] UniPathway:UPA00990 InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0451 Gene3D:3.40.50.720
GO:GO:0051287 GO:GO:0019853 EMBL:AF272706 EMBL:AY057660
EMBL:AY057694 EMBL:AY116953 IPI:IPI00536932 RefSeq:NP_001190417.1
RefSeq:NP_198236.1 UniGene:At.21733 PDB:2C54 PDB:2C59 PDB:2C5A
PDB:2C5E PDBsum:2C54 PDBsum:2C59 PDBsum:2C5A PDBsum:2C5E
ProteinModelPortal:Q93VR3 SMR:Q93VR3 STRING:Q93VR3 PaxDb:Q93VR3
PRIDE:Q93VR3 EnsemblPlants:AT5G28840.1 EnsemblPlants:AT5G28840.2
GeneID:833002 KEGG:ath:AT5G28840 TAIR:At5g28840
HOGENOM:HOG000168017 InParanoid:Q93VR3 KO:K10046 OMA:RKAQTST
PhylomeDB:Q93VR3 ProtClustDB:PLN02695 BioCyc:ARA:AT5G28840-MONOMER
BioCyc:MetaCyc:AT5G28840-MONOMER EvolutionaryTrace:Q93VR3
Genevestigator:Q93VR3 GermOnline:AT5G28840 GO:GO:0047918
Uniprot:Q93VR3
Length = 377
Score = 192 (72.6 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 84/333 (25%), Positives = 141/333 (42%)
Query: 88 SGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVI 147
S + + +TGA GF+ +H++ LK G V+ D N + +F
Sbjct: 25 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH------------MTEDMFCD 72
Query: 148 EGDINDAKLLAKLFDAV-AFTHVMHLAAQAGVRYAMQNPHSYV-HSNIAGLVTLLEACKS 205
E + D +++ HV +LAA G +Q+ HS + ++N ++EA +
Sbjct: 73 EFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAAR- 131
Query: 206 ANPQPSIVWASSSSVYGL-----NENVPFSEADRTD-QPASLYAATKKAGEEIAHTYNHI 259
N +ASS+ +Y NV E+D +P Y K A EE+ YN
Sbjct: 132 INGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKD 191
Query: 260 YGLSITGLRFFTVYGP---W-GRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYID 315
+G+ RF +YGP W G + A +F R G R FT+ID
Sbjct: 192 FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQ--TRSFTFID 249
Query: 316 DIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIE-MPGNGD 374
+ V+G L L S P N+G+ V++ ++ ++ L + KK I +PG
Sbjct: 250 ECVEGVL-RLTKSDFREPV---NIGSDEMVSMNEMAEMV---LSFEEKKLPIHHIPGPEG 302
Query: 375 VPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
V +++ + +++ G+ P L+ GL+ W
Sbjct: 303 VRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFW 335
>FB|FBgn0035147 [details] [associations]
symbol:Gale "UDP-galactose 4'-epimerase" species:7227
"Drosophila melanogaster" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS;IMP;NAS] [GO:0006012 "galactose metabolic
process" evidence=IMP;NAS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 EMBL:AE014296 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AY058582
RefSeq:NP_001246537.1 RefSeq:NP_612044.1 UniGene:Dm.4155
ProteinModelPortal:Q9W0P5 SMR:Q9W0P5 DIP:DIP-20343N IntAct:Q9W0P5
MINT:MINT-914196 STRING:Q9W0P5 PaxDb:Q9W0P5 PRIDE:Q9W0P5
EnsemblMetazoa:FBtr0072556 EnsemblMetazoa:FBtr0306917 GeneID:38076
KEGG:dme:Dmel_CG12030 UCSC:CG12030-RA CTD:2582 FlyBase:FBgn0035147
InParanoid:Q9W0P5 OrthoDB:EOG473N6Z PhylomeDB:Q9W0P5
GenomeRNAi:38076 NextBio:806870 Bgee:Q9W0P5 GermOnline:CG12030
Uniprot:Q9W0P5
Length = 350
Score = 188 (71.2 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 58/188 (30%), Positives = 84/188 (44%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKK----ARKALLNNHGVFVI 147
+VLVTG AG++G+H L + G V+ +DN N Y K +R + V
Sbjct: 5 TVLVTGGAGYIGSHTVLEMLNAGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKKVNFY 64
Query: 148 EGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSAN 207
DI D + + +F V H AA V + + P Y H+N+ G LLEA N
Sbjct: 65 RVDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMADNN 124
Query: 208 PQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTY-NHIYGLSITG 266
V++SS++VYG + +P +E T S Y TK EEI ++
Sbjct: 125 VF-KFVYSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEILKDLCKSDKRWAVVS 183
Query: 267 LRFFTVYG 274
LR+F G
Sbjct: 184 LRYFNPVG 191
Score = 171 (65.3 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 72/276 (26%), Positives = 116/276 (42%)
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
DI D + + +F V H AA V + + P Y H+N+ G LLEA N
Sbjct: 67 DITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMADNNVF 126
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTY-NHIYGLSITGLR 268
V++SS++VYG + +P +E T S Y TK EEI ++ LR
Sbjct: 127 -KFVYSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEILKDLCKSDKRWAVVSLR 185
Query: 269 FFTVYG----------PWGRPDMAYFSFTRNILQGK-P-ITVYRGK--NHVDLA-RDFTY 313
+F G P G P+ + + G+ P ++VY H RD+ +
Sbjct: 186 YFNPVGAHISGRIGEDPNGEPNNL-MPYIAQVAVGRRPSLSVYGSDFPTHDGTGVRDYIH 244
Query: 314 IDDIVKGCLGSLDTSAGPAPYRIF--NLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPG 371
I D+ +G + +LD A F NLG +V +V E+ K +++
Sbjct: 245 IVDLAEGHVKALDKLRNIAETGFFAYNLGTGVGYSVLDMVKAFEKASGKKVNYTLVDRR- 303
Query: 372 NGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
+GDV +A+ + A K+ G++ + + RW
Sbjct: 304 SGDVATCYADATLADKKLGWKAERGIDKMCEDTWRW 339
>UNIPROTKB|G4MX57 [details] [associations]
symbol:MGG_08012 "UDP-glucose 4-epimerase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:CM001232 KO:K01784 RefSeq:XP_003714962.1
ProteinModelPortal:G4MX57 SMR:G4MX57 EnsemblFungi:MGG_08012T0
GeneID:2678278 KEGG:mgr:MGG_08012 Uniprot:G4MX57
Length = 369
Score = 155 (59.6 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 50/166 (30%), Positives = 81/166 (48%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDI 151
+VL+TG G++G+ SLAL + VV +DN N ++ + + + F DI
Sbjct: 5 TVLITGGTGYIGSFTSLALLENDYDVVIVDNLYNSSAVAIDRI-ELICGKRPAFH-NVDI 62
Query: 152 NDAKLLAKLFDA-VAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
D L K+FDA V+H AA V + + P Y N+ G ++LL + + N
Sbjct: 63 TDEAALDKVFDAHPEIDSVIHFAALKAVGESGEIPLEYYRVNVGGSISLLRSMQKHNVC- 121
Query: 211 SIVWASSSSVYG----LNENVPFSEADRTDQPASLYAATKKAGEEI 252
+IV++SS++VYG + +P E P + Y TK E++
Sbjct: 122 NIVFSSSATVYGDATRVPNMIPIPEHCPIG-PTNTYGRTKSTIEDV 166
Score = 75 (31.5 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 24/100 (24%), Positives = 45/100 (45%)
Query: 309 RDFTYIDDIVKGCLGSLDTSAGPAP-YRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVI 367
RD+ ++ D+ KG L +L+ P + +NLG+ TV +++ + V+
Sbjct: 249 RDYIHVLDLAKGHLAALNYLRDNKPGVKAWNLGSGRGSTVFEMIKAFSSVVGRDLPYEVV 308
Query: 368 EMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
GDV AN + A KE G++ ++ + +W
Sbjct: 309 PRR-QGDVLDLTANPALANKELGWKTELRMEDACQDLWKW 347
>POMBASE|SPBC365.14c [details] [associations]
symbol:uge1 "UDP-glucose 4-epimerase Uge1" species:4896
"Schizosaccharomyces pombe" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=ISS] [GO:0042125 "protein galactosylation"
evidence=IMP] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00214 InterPro:IPR016040 PomBase:SPBC365.14c
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CU329671
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 HSSP:P04397 OrthoDB:EOG4NKG3T
GO:GO:0033499 GO:GO:0042125 OMA:ADKAWNA PIR:T40321
RefSeq:NP_596043.1 ProteinModelPortal:Q9Y7X5 SMR:Q9Y7X5
STRING:Q9Y7X5 PRIDE:Q9Y7X5 EnsemblFungi:SPBC365.14c.1
GeneID:2540938 KEGG:spo:SPBC365.14c NextBio:20802053 Uniprot:Q9Y7X5
Length = 355
Score = 180 (68.4 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 58/188 (30%), Positives = 91/188 (48%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDI 151
+VLVTG AG++G+H + L ++G VV +DN N ++ + K L V + D+
Sbjct: 8 TVLVTGGAGYIGSHTCVVLLEKGYDVVIVDNLCNSRVEAVHRIEK--LTGKKVIFHQVDL 65
Query: 152 NDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPS 211
D L K+F + V+H A V ++Q P SY +NI+G + L+E K N +
Sbjct: 66 LDEPALDKVFANQNISAVIHFAGLKAVGESVQVPLSYYKNNISGTINLIECMKKYNVR-D 124
Query: 212 IVWASSSSVYG----LNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIY-GLSITG 266
V++SS++VYG +P E+ + S Y TK E I + L+
Sbjct: 125 FVFSSSATVYGDPTRPGGTIPIPESCPREG-TSPYGRTKLFIENIIEDETKVNKSLNAAL 183
Query: 267 LRFFTVYG 274
LR+F G
Sbjct: 184 LRYFNPGG 191
>UNIPROTKB|O53454 [details] [associations]
symbol:MT1137 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:1773 "Mycobacterium tuberculosis"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IDA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0008202 "steroid metabolic
process" evidence=IDA] [GO:0030283 "testosterone dehydrogenase
[NAD(P)] activity" evidence=IDA] [GO:0070403 "NAD+ binding"
evidence=IDA] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 GO:GO:0005829 GO:GO:0005886 EMBL:BX842575
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0030283 PIR:H70897
RefSeq:NP_215622.1 RefSeq:NP_335580.1 RefSeq:YP_006514475.1
ProteinModelPortal:O53454 SMR:O53454 PRIDE:O53454
EnsemblBacteria:EBMYCT00000002215 EnsemblBacteria:EBMYCT00000071008
GeneID:13319678 GeneID:886004 GeneID:924962 KEGG:mtc:MT1137
KEGG:mtu:Rv1106c KEGG:mtv:RVBD_1106c PATRIC:18124264
TubercuList:Rv1106c KO:K16045 OMA:IQLQPTF ProtClustDB:CLSK790953
BioCyc:MetaCyc:MONOMER-16889 BindingDB:O53454 ChEMBL:CHEMBL1744528
GO:GO:0070403 GO:GO:0016042 GO:GO:0008202 Uniprot:O53454
Length = 370
Score = 169 (64.5 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 73/264 (27%), Positives = 109/264 (41%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
VLVTG AGFVG ++ L RG V D PSL A L V++GDI
Sbjct: 17 VLVTGGAGFVGANLVTTLLDRGHWVRSFDRA-----PSLLPAHPQLE------VLQGDIT 65
Query: 153 DAKLLAKLFDAVAFTHVMHLAA----QAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
DA + A D + + H AA G + N+ G LL A + A
Sbjct: 66 DADVCAAAVDGI--DTIFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRAGV 123
Query: 209 QPSIVWASSSSVYGLNENVPFSEADR--TDQPASLYAATKKAGEEIAHTYNHIYGLSITG 266
Q V+ SS+SV +N+ + TD+ LY TK E N + G+
Sbjct: 124 Q-RFVYTSSNSVVMGGQNIAGGDETLPYTDRFNDLYTETKVVAERFVLAQNGVDGMLTCA 182
Query: 267 LRFFTVYGPWGRPDMAYF-SFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKG-CLGS 324
+R G WG D F ++L+G + V G+ L D +Y+ +++ G L +
Sbjct: 183 IR---PSGIWGNGDQTMFRKLFESVLKGH-VKVLVGRKSARL--DNSYVHNLIHGFILAA 236
Query: 325 LD-TSAGPAPYRIFNLGNTSPVTV 347
G AP + + + + P+ +
Sbjct: 237 AHLVPDGTAPGQAYFINDAEPINM 260
Score = 51 (23.0 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 381 NISSAQKEFGYRPTTDLQTGLKKFVRWYLSYY 412
+I+ A+++ GY P Q L + + +Y+S +
Sbjct: 321 SIAKARRDLGYEPLFTTQQALTECLPYYVSLF 352
>ASPGD|ASPL0000073187 [details] [associations]
symbol:ugeA species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=RCA;IDA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0042125 "protein
galactosylation" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:BN001303
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 OMA:ADKAWNA
ProteinModelPortal:C8VAU8 EnsemblFungi:CADANIAT00005702
Uniprot:C8VAU8
Length = 371
Score = 159 (61.0 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 52/164 (31%), Positives = 79/164 (48%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDI 151
SVLVTG G++G+ +LAL + G VV DN N +L + L++ + D+
Sbjct: 5 SVLVTGGTGYIGSFTTLALLEAGYKVVVADNLYNSSAEALNRIE--LISGKKAEFAQLDV 62
Query: 152 NDAKLLAKLFDAVA-FTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
D K+F+A V+H AA V + + P Y H N+ G + LL + N
Sbjct: 63 TDEAAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLDYYHVNVYGTICLLRSMVRHNVT- 121
Query: 211 SIVWASSSSVYG----LNENVPFSEADRTDQPASLYAATKKAGE 250
+IV++SS++VYG + +P E P + Y TK A E
Sbjct: 122 NIVFSSSATVYGDATRFPDMIPIPEHCPLG-PTNPYGNTKFAIE 164
Score = 62 (26.9 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 24/100 (24%), Positives = 41/100 (41%)
Query: 309 RDFTYIDDIVKGCLGSLDTSAGPAP-YRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVI 367
RD+ +I D+ G L +L+ P R +NLG TV +++ + + V
Sbjct: 251 RDYIHILDLADGHLKALNYLRANNPGVRAWNLGTGRGSTVYEMIRAFSKAVGRDLPYEVA 310
Query: 368 EMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
GDV +N + A E G++ L+ + W
Sbjct: 311 PRRA-GDVLNLTSNPTRANTELGWKAQRTLEQACEDLWLW 349
>UNIPROTKB|Q5QPP3 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 TIGRFAMs:TIGR01179 EMBL:AL031295
UniGene:Hs.632380 HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644339
SMR:Q5QPP3 Ensembl:ENST00000418277 Uniprot:Q5QPP3
Length = 227
Score = 164 (62.8 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 65/225 (28%), Positives = 105/225 (46%)
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
DI D L +LF +F V+H A V ++Q P Y N+ G + LLE K A+
Sbjct: 2 DILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK-AHGV 60
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAH-------TYNHIY-- 260
++V++SS++VYG + +P EA T + Y +K EE+ T+N +
Sbjct: 61 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLR 120
Query: 261 GLSITGLRFFTVYG--PWGRPD--MAYFSFTRNILQGKPITVYRGKNHVDL-----ARDF 311
+ TG G P G P+ M Y S I + + + V+ G N D RD+
Sbjct: 121 YFNPTGAHASGCIGEDPQGIPNNLMPYVSQVA-IGRREALNVF-G-NDYDTEDGTGVRDY 177
Query: 312 TYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILER 356
++ D+ KG + +L RI+NLG + +V ++V +E+
Sbjct: 178 IHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEK 222
>UNIPROTKB|O53634 [details] [associations]
symbol:gca "POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA
(GDP-D-MANNOSE DEHYDRATASE)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR001509 InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061
InterPro:IPR016040 GO:GO:0040007 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
GO:GO:0055114 KO:K01711 GO:GO:0008446 HOGENOM:HOG000167992
HSSP:P32054 EMBL:CP003248 PIR:C70840 RefSeq:NP_214626.1
RefSeq:NP_334530.1 RefSeq:YP_006513430.1 SMR:O53634 DNASU:886907
EnsemblBacteria:EBMYCT00000003264 EnsemblBacteria:EBMYCT00000070103
GeneID:13316094 GeneID:886907 GeneID:922974 KEGG:mtc:MT0121
KEGG:mtu:Rv0112 KEGG:mtv:RVBD_0112 PATRIC:18121990
TubercuList:Rv0112 OMA:CSGVATR ProtClustDB:CLSK790272
Uniprot:O53634
Length = 318
Score = 171 (65.3 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 67/253 (26%), Positives = 107/253 (42%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M V +TGA G +G+H++ L G V + Y P++ + L +G E D
Sbjct: 1 MKVWITGAGGMMGSHLAEMLLAAGHDV-----YATYCRPTIDPSD---LQFNGA---EVD 49
Query: 151 INDAKLLAKLFDAVAFTH---VMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSAN 207
I D ++D++A V HLAAQ+ + P + +N+ G + EA +
Sbjct: 50 ITD---WCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVR 106
Query: 208 PQPSIVWASSSSVYGLNE--NVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSIT 265
P I+ A SS+ YG + VP +E R +P Y +K A + +A+ Y+ YG+
Sbjct: 107 PHAKIIVAGSSAEYGFVDPSEVPINER-RELRPLHPYGVSKAATDMLAYQYHKSYGMHTV 165
Query: 266 GLRFFTVYGPWGRPDMAYFSFTRNI--LQGKPITVYRGKNHVDLARDFTYIDDIVKGCLG 323
R F GP D A F R L+ P ++ R + D+ + +
Sbjct: 166 VARIFNCTGPRKVGD-ALSDFVRRCTWLEHHPEQSAIRVGNLKTKRTIVDVRDLNRALML 224
Query: 324 SLDTSAGPAPYRI 336
LD A Y +
Sbjct: 225 MLDKGEAGADYNV 237
>TIGR_CMR|CJE_1273 [details] [associations]
symbol:CJE_1273 "UDP-glucose 4-epimerase" species:195099
"Campylobacter jejuni RM1221" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0044237
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 RefSeq:YP_179261.1
ProteinModelPortal:Q5HTX4 STRING:Q5HTX4 GeneID:3231780
KEGG:cjr:CJE1273 PATRIC:20044342 OMA:MMSERIL ProtClustDB:CLSK879103
BioCyc:CJEJ195099:GJC0-1299-MONOMER Uniprot:Q5HTX4
Length = 328
Score = 171 (65.3 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 78/334 (23%), Positives = 136/334 (40%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M +L++G AG++G+H K + LDN + +++ +K + F E D
Sbjct: 1 MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDLQK--IRAFKFF--EQD 56
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
++D + + LF+ F ++H AA V +MQNP Y +N L+E C
Sbjct: 57 LSDFQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTGVN- 115
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEI---AHTYNHIYGLSITGL 267
+++S+++ YG + SE P + Y +K EE+ A N + I L
Sbjct: 116 KFIFSSTAATYGEPQTPVVSETSPL-APINPYGRSKLMSEEVLRDASMANPEFKHCI--L 172
Query: 268 RFFTVYGPW-----GR--PDMAYF-SFTRNILQGKPITVYRGKNHVDLA-----RDFTYI 314
R+F V G G+ P GK ++ + D RDF ++
Sbjct: 173 RYFNVAGACMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDYDTKDGTCIRDFIHV 232
Query: 315 DDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGD 374
DDI L +LD +FN+G +V +++ +++ V K + GD
Sbjct: 233 DDISSAHLATLDYLQENES-NVFNVGYGHGFSVKEVIEAMKKVSGVDFKVELAPRRA-GD 290
Query: 375 VPFTHANISSAQKEFGYRPT-TDLQTGLKKFVRW 407
++ S + ++P DL+ K W
Sbjct: 291 PSVLISDASKIRNLTSWQPKYDDLELICKSAFDW 324
>CGD|CAL0000450 [details] [associations]
symbol:GAL102 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 170 (64.9 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 77/316 (24%), Positives = 143/316 (45%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGV--VGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
++V+G AGF+G H + K+ +D N + + + K+ N V + D
Sbjct: 9 IVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSFSNFEFVHL---D 65
Query: 151 IND-AKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
++D + L K+ T +++ AA++ V + ++P + +NI LLE C NP
Sbjct: 66 LSDNLEYLLKITKNT--TDIINFAAESSVDRSFKDPVYFTKNNILATQNLLE-CHRLNPS 122
Query: 210 PS-IVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
+ S+ VYG + ++ + P + Y+A+K A + I +Y + Y L IT LR
Sbjct: 123 IGYFLHISTDEVYG-DVYEGDNKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPITILR 181
Query: 269 FFTVYGPWGRPDMAYFSFTRNILQGKPITVY-RGKNHVDLARDFTYIDDIVKGCLGSLDT 327
VYGP P+ + I + KPI V+ +G N R + Y+ DIV
Sbjct: 182 PNNVYGPLQYPEKIIPLTIQCINEKKPIPVHGKGTNK----RKYLYVLDIVLAIETVWIK 237
Query: 328 SAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQ- 386
+ +I+N+G T + L+ ++ +++ + I+ + + T+ +I + +
Sbjct: 238 NPMTTVNQIYNIGGTDELDNLSLIKLI---MEIFGRGE-IQFIKDRNYNDTNYSIDTTKI 293
Query: 387 KEFGYRPTTDLQTGLK 402
G+ P L GL+
Sbjct: 294 HNLGWSPKISLVQGLQ 309
>UNIPROTKB|Q59VY4 [details] [associations]
symbol:TGD99 "Putative uncharacterized protein TGD99"
species:237561 "Candida albicans SC5314" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 170 (64.9 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 77/316 (24%), Positives = 143/316 (45%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGV--VGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
++V+G AGF+G H + K+ +D N + + + K+ N V + D
Sbjct: 9 IVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSFSNFEFVHL---D 65
Query: 151 IND-AKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
++D + L K+ T +++ AA++ V + ++P + +NI LLE C NP
Sbjct: 66 LSDNLEYLLKITKNT--TDIINFAAESSVDRSFKDPVYFTKNNILATQNLLE-CHRLNPS 122
Query: 210 PS-IVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
+ S+ VYG + ++ + P + Y+A+K A + I +Y + Y L IT LR
Sbjct: 123 IGYFLHISTDEVYG-DVYEGDNKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPITILR 181
Query: 269 FFTVYGPWGRPDMAYFSFTRNILQGKPITVY-RGKNHVDLARDFTYIDDIVKGCLGSLDT 327
VYGP P+ + I + KPI V+ +G N R + Y+ DIV
Sbjct: 182 PNNVYGPLQYPEKIIPLTIQCINEKKPIPVHGKGTNK----RKYLYVLDIVLAIETVWIK 237
Query: 328 SAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQ- 386
+ +I+N+G T + L+ ++ +++ + I+ + + T+ +I + +
Sbjct: 238 NPMTTVNQIYNIGGTDELDNLSLIKLI---MEIFGRGE-IQFIKDRNYNDTNYSIDTTKI 293
Query: 387 KEFGYRPTTDLQTGLK 402
G+ P L GL+
Sbjct: 294 HNLGWSPKISLVQGLQ 309
>TIGR_CMR|CBU_0676 [details] [associations]
symbol:CBU_0676 "NAD dependent epimerase/dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GenomeReviews:AE016828_GR GO:GO:0044237 EMBL:AF387640
ProteinModelPortal:Q93N67 PRIDE:Q93N67 PATRIC:17930035
HOGENOM:HOG000168002 ProtClustDB:CLSK905415
BioCyc:CBUR227377:GJ7S-674-MONOMER Uniprot:Q93N67
Length = 337
Score = 167 (63.8 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 84/319 (26%), Positives = 142/319 (44%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
+LVTG AG+VG+ + L + G V D + D L K LN ++EGDI
Sbjct: 8 ILVTGGAGYVGSALVPQLLELGYRVTVYDTLF-FGDDFLPK-ENPYLN-----IVEGDIR 60
Query: 153 DAKLLAKLF-DAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPS 211
D + L + F DA A + ++ A + + S N+ +++A K+A +
Sbjct: 61 DTERLKQCFKDADAVISLACISNDAS--FELDETLS-TSINLEAFEPMVKAAKAAGVK-R 116
Query: 212 IVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 271
++ASSSSVYG++E +E + P +LY K E + + + +T +R T
Sbjct: 117 FIYASSSSVYGVSETKDVTE-EHPLVPLTLYNKYKGMCEPLLFKHQSPEFVCVT-IRPAT 174
Query: 272 V--YGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYID--DIVKGCLGSLDT 327
+ Y P R D++ T + + ITV+ G L + D D+ K L D
Sbjct: 175 LCGYAPRQRLDLSVNILTNHAVNNNKITVFGGSQ---LRPNLHVQDMCDLYKLLLVVPDE 231
Query: 328 S-AGPAPYRIFNLG--NTSPVTVPKLV-NILERHLKVKAKKNVIEMPGNGDVPFTHANIS 383
AG FN+G N S + + +V NI+E KA +++ P + D+ H N
Sbjct: 232 KIAGET----FNVGYENKSIMEIAHIVKNIVEEEFPEKAPIDIVTAPTD-DIRSYHINSD 286
Query: 384 SAQKEFGYRPTTDLQTGLK 402
++ G+ ++ ++
Sbjct: 287 KIKRCLGFEAKYSIEDAVR 305
>WB|WBGene00015298 [details] [associations]
symbol:C01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0040011 GeneTree:ENSGT00530000063128 KO:K12450 GO:GO:0008460
eggNOG:COG1088 OMA:TARMNNI PANTHER:PTHR10366:SF41 HSSP:P26391
EMBL:FO080258 PIR:T15370 RefSeq:NP_001040727.1
ProteinModelPortal:Q17556 SMR:Q17556 STRING:Q17556
World-2DPAGE:0020:Q17556 PaxDb:Q17556 EnsemblMetazoa:C01F1.3a
GeneID:173762 KEGG:cel:CELE_C01F1.3 UCSC:C01F1.3a CTD:173762
WormBase:C01F1.3a HOGENOM:HOG000017218 InParanoid:Q17556
NextBio:880983 ArrayExpress:Q17556 Uniprot:Q17556
Length = 631
Score = 172 (65.6 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 78/330 (23%), Positives = 136/330 (41%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGD--GVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
+V++TG GF+G++ + V +D + + +++ N+ ++
Sbjct: 7 NVVITGGCGFIGSNFVNYIHDAWPTCNFVNIDKL--ILNSDTQNVAESVRNSPRYKLVLT 64
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
DI + + +F+ V+H AA V +N+ + LE ++
Sbjct: 65 DIKNEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTYGKI 124
Query: 210 PSIVWASSSSVYG---LNENVPFS-EADRTDQPASLYAATKKAGEEIAHTYNHIYGLSIT 265
V S+ VYG L+EN E R P + YAATK AGE Y Y L I
Sbjct: 125 KRFVHISTDEVYGDSDLSENEQGKVEFSRL-VPGNPYAATKIAGEAYVRAYQTQYNLPIV 183
Query: 266 GLRFFTVYGP--WGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLG 323
R +YGP W + F + +G+ GK R + ++DD G
Sbjct: 184 TARMNNIYGPNQWDVKVVPRFIEIAKV-RGEYTIQGSGKQ----LRSWLFVDDASAGLKA 238
Query: 324 SLDTSAGPAPYRIFNLG-----NTSPV--TVPKLVNI-LERHLKVKAKKNVIEMPGNGDV 375
+ G + I+NLG N + + T+ + V++ L R + K++ + P N D+
Sbjct: 239 VCEK--GEL-HEIYNLGTYYEKNVADLAKTIQEEVDLQLGRAHEPPKYKSIPDRPYN-DL 294
Query: 376 PFTHANISSAQKEFGYRPTTDLQTGLKKFV 405
+ +I A+ + G+ PTT G++ V
Sbjct: 295 RYL-ISIEKAKNDLGWEPTTSFDDGMRHTV 323
>POMBASE|SPBPB2B2.11 [details] [associations]
symbol:SPBPB2B2.11 "nucleotide-sugar 4,6-dehydratase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006012 "galactose metabolic process" evidence=IEP] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0031506 "cell wall
glycoprotein biosynthetic process" evidence=NAS] [GO:0033554
"cellular response to stress" evidence=IEP] [GO:0042125 "protein
galactosylation" evidence=NAS] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
InterPro:IPR020904 Pfam:PF01370 InterPro:IPR016040
PomBase:SPBPB2B2.11 GO:GO:0005829 GO:GO:0005634 GO:GO:0033554
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
EMBL:CU329671 GO:GO:0016491 GO:GO:0055114 GO:GO:0006012
GO:GO:0042125 GO:GO:0031506 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:NP_596857.1 HSSP:P26391 ProteinModelPortal:Q9HDU4
STRING:Q9HDU4 EnsemblFungi:SPBPB2B2.11.1 GeneID:2541398
KEGG:spo:SPBPB2B2.11 OMA:IQYVKDR OrthoDB:EOG4VX5DN NextBio:20802505
Uniprot:Q9HDU4
Length = 365
Score = 154 (59.3 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 57/200 (28%), Positives = 94/200 (47%)
Query: 94 LVTGAAGFVGTH-VSLALKKRGDG----VVGLDNFNNYYDPSLKKARKALLNNHGVFVIE 148
L+TG AGF+G++ + A+ K D + L +NY L K +LN +E
Sbjct: 13 LITGGAGFIGSNFLDYAVDKYPDFHFTCIDKLSYVSNYTTVFLSK----VLNQPNFRFLE 68
Query: 149 GDI-NDAKLLAKLF----DAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEAC 203
D+ + K L + + TH+++ AA++ V + +P + +NI LLE
Sbjct: 69 MDLATNYKFLYQFMVEDSEINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLLECV 128
Query: 204 K-------SANPQPSIVWASSSSVYG-LNENVPFSEADRTDQPASLYAATKKAGEEIAHT 255
+ + + V S+ VYG +EN E + + P S YAA+K A + I +
Sbjct: 129 RILLGKKEELRNRLNFVHVSTDEVYGEQDENASVDEKSKLN-PTSPYAASKAAVDLIIQS 187
Query: 256 YNHIYGLSITGLRFFTVYGP 275
Y + Y +S+T +R VYGP
Sbjct: 188 YRYSYKISVTVIRANNVYGP 207
Score = 55 (24.4 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 387 KEFGYRPTTDLQTGLKKFVRWY 408
K G+RP L+TGL+K + Y
Sbjct: 343 KSLGWRPQIPLETGLRKLIDEY 364
>TIGR_CMR|CJE_1611 [details] [associations]
symbol:CJE_1611 "GDP-mannose 4,6-dehydratase"
species:195099 "Campylobacter jejuni RM1221" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0044237 KO:K01711 GO:GO:0008446
HOGENOM:HOG000167992 RefSeq:YP_179592.1 ProteinModelPortal:Q5HSZ3
STRING:Q5HSZ3 GeneID:3232239 KEGG:cjr:CJE1611 PATRIC:20045019
OMA:RISIFYA ProtClustDB:CLSK931088
BioCyc:CJEJ195099:GJC0-1641-MONOMER Uniprot:Q5HSZ3
Length = 343
Score = 160 (61.4 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 71/287 (24%), Positives = 121/287 (42%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGD-GVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
+ L+TG G VG+ ++ L D V+G+ + D ++ + + + D
Sbjct: 4 TALITGFTGQVGSQMADFLLANTDYEVIGMMRWQEPMD-NIYHLSDRINKKDRISIFYAD 62
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ- 209
+ND L KLF++ + HLAAQ+ + + P + +NI G +LE + +
Sbjct: 63 LNDYSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRILKAKD 122
Query: 210 ---PSIVWASSSSVYGLNE-NVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSIT 265
P + SSS VYG + + +E D T AS Y+ +K + + Y Y +
Sbjct: 123 GYDPVVHVCSSSEVYGRAKVGIKLNE-DTTFHGASPYSISKIGTDYLGRFYGEAYNIRTF 181
Query: 266 GLRFFTVYGPWGRPDMAYFSFTRN----ILQGKPITVYRGKNHVDLARDFTYIDDIVKGC 321
R T GP R D+ + S I G V + N + R F D ++
Sbjct: 182 VTRMGTHSGP-RRSDVFFESTVAKQIALIETGYQEPVIKVGN-LSSVRTFQDARDAIRAY 239
Query: 322 -LGSLDTSAGPAPY-RIFNLGNTSPVTVPKLVNILERHLKVKAKKNV 366
L SL++ G P FN+ +P+++ IL L +K++
Sbjct: 240 YLLSLESQKGKVPCGEAFNIAGEEAFKLPEVIEIL---LSFSTRKDI 283
>UNIPROTKB|G4MZC9 [details] [associations]
symbol:MGG_11399 "Sterol-4-alpha-carboxylate
3-dehydrogenase" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006696 EMBL:CM001232
KO:K07748 GO:GO:0000252 RefSeq:XP_003713491.1
ProteinModelPortal:G4MZC9 EnsemblFungi:MGG_11399T0 GeneID:5051352
KEGG:mgr:MGG_11399 Uniprot:G4MZC9
Length = 371
Score = 146 (56.5 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 67/233 (28%), Positives = 105/233 (45%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDI 151
SVLV G GF+G+H+ L LD++ S R GV + DI
Sbjct: 12 SVLVVGGCGFLGSHIVRML---------LDDYK-CSAVSAVDLRCTRNRREGVQYHDADI 61
Query: 152 NDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPS 211
+A+ L +FD V V+H A+ ++ + + N+ G T++EACK A + +
Sbjct: 62 TNAERLVSVFDEVRPDVVIHTASPLAQGNSVVHRDIFYKVNVEGTRTVVEACKKAGVK-A 120
Query: 212 IVWASSSSVYGLNENVP-FSEAD------RTDQPASLYAATKKAGEEIAHTYNHIYGLSI 264
+V+ SS+SV +++NV AD R D+ Y+ TK EEI N L
Sbjct: 121 LVFTSSASV--ISDNVSDLINADERWPMIRGDKQTEYYSDTKAEAEEIVLKANEPGKLLT 178
Query: 265 TGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDI 317
+R ++G G M + + +GK V G N+ +L DFTY ++
Sbjct: 179 AAIRPSGIFGE-G-DSMVTANLVKTYREGK-WKVQVGDNN-NLF-DFTYAGNV 226
Score = 56 (24.8 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 381 NISSAQKEFGYRPTTDLQTGLKKFVRWYL 409
NI+ A++ GY P ++ G+++ V++ L
Sbjct: 332 NITKAKQRLGYAPIVSMEEGVRRGVQYIL 360
>TIGR_CMR|CBU_0689 [details] [associations]
symbol:CBU_0689 "GDP-mannose 4,6-dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GenomeReviews:AE016828_GR GO:GO:0019673 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P93031 EMBL:AF387640
ProteinModelPortal:Q93N54 SMR:Q93N54 PRIDE:Q93N54 PATRIC:17930061
ProtClustDB:CLSK914242 BioCyc:CBUR227377:GJ7S-687-MONOMER
Uniprot:Q93N54
Length = 348
Score = 159 (61.0 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 85/332 (25%), Positives = 140/332 (42%)
Query: 95 VTGAAGFVGTHVSLALKKRGDGVVGL----DNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
+TG G G++++ L ++ V G+ +FN + + + N +F+ GD
Sbjct: 7 ITGITGQDGSYLAELLLRKDYEVHGMIRRSSSFNTERLSDIYEEKHK--ENARLFLHYGD 64
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIA-GLVTLLEACKSANPQ 209
I D +L KL + V +LAAQ+ VR + P Y I G + +LEA K+A+
Sbjct: 65 ITDGLVLNKLIHEIKPHEVYNLAAQSHVRVSFDIP-VYTMETIGLGTLNILEAIKNADNA 123
Query: 210 PSIVW--ASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL-SITG 266
I + ASSS +YG ++VP +E+ + P S YA K Y YGL + TG
Sbjct: 124 KEIRFYQASSSEMYGDVKSVPQTESTPFN-PRSPYACAKVFAHYQTINYRESYGLHASTG 182
Query: 267 LRFFTVYGPWGRPDMA--YFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGS 324
+ F G + S IL G +Y G +++ RD+ Y D V+
Sbjct: 183 ILFNHESPRRGETFVTRKITSGIAKILAGLEKKIYLG--NLEAKRDWGYAKDYVEAMWLM 240
Query: 325 LDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGN---GDVPFTHAN 381
L P Y + G T +V +L+ + + + V+ P +V
Sbjct: 241 LQQDT-PDDY-VIATGETW--SVKELLEYSFNLVNLNWRDFVVIDPKYYRPAEVDLLLGE 296
Query: 382 ISSAQKEFGYRPTTDLQTGLKKFVRWYLSYYG 413
A+++ G++P T +K + YG
Sbjct: 297 PKKAKEKLGWQPNTSFHKLIKIMLEHDFKSYG 328
>UNIPROTKB|Q9HTB6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:208964
"Pseudomonas aeruginosa PAO1" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 PseudoCAP:PA5454
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE004091 GenomeReviews:AE004091_GR GO:GO:0033705 EMBL:AF009955
PIR:H82964 RefSeq:NP_254141.1 HSSP:P27830 ProteinModelPortal:Q9HTB6
SMR:Q9HTB6 GeneID:883037 KEGG:pae:PA5454 PATRIC:19845791
HOGENOM:HOG000167992 OMA:NLLEACA ProtClustDB:CLSK869364
Uniprot:Q9HTB6
Length = 304
Score = 147 (56.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 57/246 (23%), Positives = 102/246 (41%)
Query: 169 VMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYG--LNEN 226
V+HLA Q V A ++P + N+ G + LL+A K+ + ++ SS VYG
Sbjct: 57 VIHLAGQTYVPEAFRDPARTLQINLLGTLNLLQALKARGFSGTFLYISSGDVYGQVAEAA 116
Query: 227 VPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSF 286
+P E + P + YA +K A E + + G + R F GP + S
Sbjct: 117 LPIHE-ELIPHPRNPYAVSKLAAESLCLQWGITEGWRVLVARPFNHIGPGQKDSFVIASA 175
Query: 287 TRNILQGKP-ITVYRGK-NHVDLARDFTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSP 344
R I + K + R + +D++RDF + D++ L L A Y + + G
Sbjct: 176 ARQIARMKQGLQANRLEVGDIDVSRDFLDVQDVLSAYLRLLSHGEAGAVYNVCS-GQEQK 234
Query: 345 VT--VPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLK 402
+ + L +I + L++ + V +HA + G++P ++ L+
Sbjct: 235 IRELIELLADIAQVELEIVQDPARMRRAEQRRVRGSHARLHDTT---GWKPEITIKQSLR 291
Query: 403 KFVR-W 407
+ W
Sbjct: 292 AILSDW 297
Score = 47 (21.6 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 93 VLVTGAAGFVGTHVSLAL 110
+ VTG +GFVG H+ L
Sbjct: 5 LFVTGLSGFVGKHLQAYL 22
>UNIPROTKB|P67910 [details] [associations]
symbol:rfaD "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:83333 "Escherichia coli K-12" [GO:0097171
"ADP-L-glycero-beta-D-manno-heptose biosynthetic process"
evidence=IEA] [GO:0070401 "NADP+ binding" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008712 "ADP-glyceromanno-heptose
6-epimerase activity" evidence=IEA;IDA] [GO:0009244
"lipopolysaccharide core region biosynthetic process"
evidence=IEA;IMP] UniPathway:UPA00356 HAMAP:MF_01601
InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 GO:GO:0005829 GO:GO:0006950
GO:GO:0016020 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:U00039
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009244 GO:GO:0070401 GO:GO:0097171
EMBL:M33577 EMBL:X54492 PIR:JU0299 RefSeq:NP_418076.1
RefSeq:YP_491814.1 PDB:1EQ2 PDB:2X6T PDBsum:1EQ2 PDBsum:2X6T
ProteinModelPortal:P67910 SMR:P67910 DIP:DIP-35958N IntAct:P67910
SWISS-2DPAGE:P67910 PaxDb:P67910 PRIDE:P67910
EnsemblBacteria:EBESCT00000000716 EnsemblBacteria:EBESCT00000000717
EnsemblBacteria:EBESCT00000000718 EnsemblBacteria:EBESCT00000000719
EnsemblBacteria:EBESCT00000016472 GeneID:12934299 GeneID:948134
KEGG:ecj:Y75_p3555 KEGG:eco:b3619 PATRIC:32122725 EchoBASE:EB0831
EcoGene:EG10838 HOGENOM:HOG000167987 KO:K03274 OMA:AVNLWFW
ProtClustDB:PRK11150 BioCyc:EcoCyc:EG10838-MONOMER
BioCyc:ECOL316407:JW3594-MONOMER BioCyc:MetaCyc:EG10838-MONOMER
SABIO-RK:P67910 EvolutionaryTrace:P67910 Genevestigator:P67910
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
Uniprot:P67910
Length = 310
Score = 152 (58.6 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 77/326 (23%), Positives = 132/326 (40%)
Query: 93 VLVTGAAGFVGTHVSLALKKRG-DGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDI 151
++VTG AGF+G+++ AL +G ++ +DN + K LN E +
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD----GTKFVNLVDLNIADYMDKEDFL 57
Query: 152 NDAKLLAKLFDAVAFTH--VMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
+ D A H + +Y M N + Y LL C +
Sbjct: 58 IQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKE-------LLHYCLER--E 108
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRF 269
++ASS++ YG F E+ ++P ++Y +K +E I G R+
Sbjct: 109 IPFLYASSAATYG-GRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRY 167
Query: 270 FTVYGPW-G-RPDMAYFSFTRN--ILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSL 325
F VYGP G + MA +F N + G+ ++ G + RDF Y+ D+ L L
Sbjct: 168 FNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSEN--FKRDFVYVGDVADVNLWFL 225
Query: 326 DTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGN--GDVP-FTHANI 382
+ IFNLG + + + + K K + I P G FT A++
Sbjct: 226 ENGVSG----IFNLGTGRAESFQAVADATLAYHK-KGQIEYIPFPDKLKGRYQAFTQADL 280
Query: 383 SSAQKEFGY-RPTTDLQTGLKKFVRW 407
++ + GY +P + G+ +++ W
Sbjct: 281 TNLRAA-GYDKPFKTVAEGVTEYMAW 305
>TAIR|locus:2155036 [details] [associations]
symbol:GMD1 ""GDP-D-mannose 4,6-dehydratase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA;ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AB022211 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 EMBL:AF195140
IPI:IPI00517362 RefSeq:NP_201429.1 UniGene:At.46822
ProteinModelPortal:Q9SNY3 SMR:Q9SNY3 IntAct:Q9SNY3 STRING:Q9SNY3
PaxDb:Q9SNY3 PRIDE:Q9SNY3 EnsemblPlants:AT5G66280.1 GeneID:836760
KEGG:ath:AT5G66280 TAIR:At5g66280 InParanoid:Q9SNY3
PhylomeDB:Q9SNY3 ProtClustDB:PLN02653 Genevestigator:Q9SNY3
GermOnline:AT5G66280 Uniprot:Q9SNY3
Length = 361
Score = 153 (58.9 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 73/246 (29%), Positives = 111/246 (45%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGL----DNFNN------YYDPSLKKARKALLNNHG 143
LVTG G G++++ L ++G V GL NFN Y DP KAL+ H
Sbjct: 20 LVTGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRLNHIYVDPH--NVNKALMKLH- 76
Query: 144 VFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIA-GLVTLLEA 202
GD++DA L + D + V +LAAQ+ V + + P Y +A G + LLEA
Sbjct: 77 ----YGDLSDASSLRRWLDVIKPDEVYNLAAQSHVAVSFEIP-DYTADVVATGALRLLEA 131
Query: 203 CKSANPQP--SIVW--ASSSSVYGLNENVPFSEADRTD-QPASLYAATKKAGEEIAHTYN 257
+S N +I + A SS ++G + P +++ T P S YAA+K A Y
Sbjct: 132 VRSHNIDNGRAIKYYQAGSSEMFG---STPPPQSETTPFHPRSPYAASKCAAHWYTVNYR 188
Query: 258 HIYGL-SITGLRFFTVYGPWGRPDMAYFSFTR---NILQGKPITVYRGKNHVDLARDFTY 313
YGL + G+ F P + TR I G ++ G ++ +RD+ +
Sbjct: 189 EAYGLYACNGI-LFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLG--NIQASRDWGF 245
Query: 314 IDDIVK 319
D V+
Sbjct: 246 AGDYVE 251
>WB|WBGene00000266 [details] [associations]
symbol:bre-1 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=IDA] [GO:0055120 "striated muscle dense body"
evidence=IDA] [GO:0030017 "sarcomere" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005783 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0030017 GO:GO:0055120 GO:GO:0071688
GO:GO:0075015 GO:GO:0017085 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AM231683 EMBL:AM231684 EMBL:Z68215 PIR:T20182
RefSeq:NP_001076668.1 RefSeq:NP_001076669.1 RefSeq:NP_001076670.1
RefSeq:NP_501563.1 RefSeq:NP_501564.1 UniGene:Cel.13248
ProteinModelPortal:Q18801 SMR:Q18801 STRING:Q18801 PaxDb:Q18801
PRIDE:Q18801 EnsemblMetazoa:C53B4.7b GeneID:177717
KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717 WormBase:C53B4.7a
WormBase:C53B4.7b WormBase:C53B4.7c WormBase:C53B4.7d
WormBase:C53B4.7e GeneTree:ENSGT00440000033640 InParanoid:Q18801
OMA:IAYNLTD NextBio:898062 GO:GO:0042350 Uniprot:Q18801
Length = 399
Score = 157 (60.3 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 55/207 (26%), Positives = 97/207 (46%)
Query: 72 GIQWEKHVRSSAQIHRSGGMSV-LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPS 130
G+ E +A++ V L+TG +G G++++ L +G V G+ ++ ++ +
Sbjct: 31 GMSHEVSTTPAAELAAFRARKVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTA 90
Query: 131 -LKKARKALLNNHG--VFVIE-GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPH 186
++ + +HG F + GD+ D+ L KL + T V HLAAQ+ V+ + P
Sbjct: 91 RIEHLYSNPITHHGDSSFSLHYGDMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLPE 150
Query: 187 SYVHSNIAGLVTLLEACKSANPQPSIVW--ASSSSVYGLNENVPFSEADRTD-QPASLYA 243
+ G + LL+A + + + AS+S +YG + +P SE +T P S YA
Sbjct: 151 YTAEVDAVGTLRLLDAIHACRLTEKVRFYQASTSELYGKVQEIPQSE--KTPFYPRSPYA 208
Query: 244 ATKKAGEEIAHTYNHIYGL-SITGLRF 269
K G I Y Y + + G+ F
Sbjct: 209 VAKMYGYWIVVNYREAYNMFACNGILF 235
Score = 37 (18.1 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 325 LDTSAGPAPYRIFNLGNTSPVTVPKLV 351
++T G A LG + VTVP+LV
Sbjct: 356 VETLLGNAEKAKKTLGWEAKVTVPELV 382
>UNIPROTKB|Q18801 [details] [associations]
symbol:bre-1 "GDP-mannose 4,6 dehydratase 1" species:6239
"Caenorhabditis elegans" [GO:0017085 "response to insecticide"
evidence=IMP] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IDA] [GO:0075015 "formation of infection structure on or
near host" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005783
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030017
GO:GO:0055120 GO:GO:0071688 GO:GO:0075015 GO:GO:0017085
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AM231683 EMBL:AM231684 EMBL:Z68215
PIR:T20182 RefSeq:NP_001076668.1 RefSeq:NP_001076669.1
RefSeq:NP_001076670.1 RefSeq:NP_501563.1 RefSeq:NP_501564.1
UniGene:Cel.13248 ProteinModelPortal:Q18801 SMR:Q18801
STRING:Q18801 PaxDb:Q18801 PRIDE:Q18801 EnsemblMetazoa:C53B4.7b
GeneID:177717 KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717
WormBase:C53B4.7a WormBase:C53B4.7b WormBase:C53B4.7c
WormBase:C53B4.7d WormBase:C53B4.7e GeneTree:ENSGT00440000033640
InParanoid:Q18801 OMA:IAYNLTD NextBio:898062 GO:GO:0042350
Uniprot:Q18801
Length = 399
Score = 157 (60.3 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 55/207 (26%), Positives = 97/207 (46%)
Query: 72 GIQWEKHVRSSAQIHRSGGMSV-LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPS 130
G+ E +A++ V L+TG +G G++++ L +G V G+ ++ ++ +
Sbjct: 31 GMSHEVSTTPAAELAAFRARKVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTA 90
Query: 131 -LKKARKALLNNHG--VFVIE-GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPH 186
++ + +HG F + GD+ D+ L KL + T V HLAAQ+ V+ + P
Sbjct: 91 RIEHLYSNPITHHGDSSFSLHYGDMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLPE 150
Query: 187 SYVHSNIAGLVTLLEACKSANPQPSIVW--ASSSSVYGLNENVPFSEADRTD-QPASLYA 243
+ G + LL+A + + + AS+S +YG + +P SE +T P S YA
Sbjct: 151 YTAEVDAVGTLRLLDAIHACRLTEKVRFYQASTSELYGKVQEIPQSE--KTPFYPRSPYA 208
Query: 244 ATKKAGEEIAHTYNHIYGL-SITGLRF 269
K G I Y Y + + G+ F
Sbjct: 209 VAKMYGYWIVVNYREAYNMFACNGILF 235
Score = 37 (18.1 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 325 LDTSAGPAPYRIFNLGNTSPVTVPKLV 351
++T G A LG + VTVP+LV
Sbjct: 356 VETLLGNAEKAKKTLGWEAKVTVPELV 382
>DICTYBASE|DDB_G0281487 [details] [associations]
symbol:DDB_G0281487 "3-beta-hydroxysteroid
dehydrogenase" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 dictyBase:DDB_G0281487 eggNOG:COG0451
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AAFI02000041 KO:K07748 RefSeq:XP_640712.1
ProteinModelPortal:Q54TU9 STRING:Q54TU9 PRIDE:Q54TU9
EnsemblProtists:DDB0233059 GeneID:8623099 KEGG:ddi:DDB_G0281487
InParanoid:Q54TU9 OMA:HIVWGPG ProtClustDB:CLSZ2729041
Uniprot:Q54TU9
Length = 349
Score = 112 (44.5 bits), Expect = 5.6e-08, Sum P(3) = 5.6e-08
Identities = 54/215 (25%), Positives = 91/215 (42%)
Query: 135 RKALLNNHGVFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQA-GVRYAMQNPHSYVHSNI 193
RK+ ++ F I GDI + L + T V H A+ G+ Y + Y N+
Sbjct: 36 RKSFEDDRVTFHI-GDIRKTEDLESACKGI--TTVFHTASPTHGMGYDI-----YYSVNV 87
Query: 194 AGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEA-DRTDQPASLYAATKKAGEEI 252
G L+EAC + + +SSS V+ + V E D+ Y TK+ GE
Sbjct: 88 IGTERLIEACIKCGVKQLVYTSSSSVVFNGKDIVNGDETLPYVDKHIDPYNKTKELGERA 147
Query: 253 AHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFT 312
L + LR ++GP R + F + +GK ++ N++ D+T
Sbjct: 148 VLKAKGS-NLLVCALRPAGIFGP--REVQGWPQFLKAAKEGKNKFMFGDGNNLC---DWT 201
Query: 313 YIDDIVKGCLGSLD--TSAGPAPYRIFNLGNTSPV 345
YID++V + + D T+ P ++ + N P+
Sbjct: 202 YIDNVVHAHILAADNMTTNSPISGSVYFITNDEPI 236
Score = 70 (29.7 bits), Expect = 5.6e-08, Sum P(3) = 5.6e-08
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 381 NISSAQKEFGYRPTTDLQTGLKKFVRWYL 409
NI A+KE Y+P L+ G++K W+L
Sbjct: 302 NIEKAKKELKYKPIVSLRDGMEKTKEWFL 330
Score = 50 (22.7 bits), Expect = 5.6e-08, Sum P(3) = 5.6e-08
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGD 115
S LV G GF+G ++ +L RG+
Sbjct: 4 SYLVVGGCGFLGRYIVESLLARGE 27
>UNIPROTKB|P72586 [details] [associations]
symbol:rfbD "GDP-D-mannose dehydratase" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:BA000022 GenomeReviews:BA000022_GR
GO:GO:0019673 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P32054 PIR:S74433
RefSeq:NP_439905.1 RefSeq:YP_005649960.1 ProteinModelPortal:P72586
SMR:P72586 IntAct:P72586 STRING:P72586 GeneID:12255298
GeneID:951882 KEGG:syn:sll1212 KEGG:syy:SYNGTS_0007 PATRIC:23836866
ProtClustDB:CLSK892430 Uniprot:P72586
Length = 362
Score = 151 (58.2 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 75/271 (27%), Positives = 109/271 (40%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGL----DNFNN------YYDPSLKKARKALLNNH 142
VL+TG G G+++S L ++G V G+ FN Y DP +A+ L H
Sbjct: 7 VLLTGITGQDGSYLSELLLEKGYQVHGIIRRTSTFNTDRIDHLYVDPHDLEAKLRL---H 63
Query: 143 GVFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEA 202
GD+ D L ++ + V T + +L AQ+ VR + +P V S G + LLEA
Sbjct: 64 -----YGDLTDGTTLRRILEDVKPTEIYNLGAQSHVRVSFDSPEYTVDSVAMGTLRLLEA 118
Query: 203 CKSANPQPSI----VWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNH 258
+ + I A SS ++G + +P E P S YA K G Y
Sbjct: 119 IRDYQHRTGIQVRFYQAGSSEMFGKVQEIPQKETTPF-YPRSPYACAKVYGHWQTVNYRE 177
Query: 259 IYGL-SITGLRFFTVYGPWGRPDMAYFSFTR---NILQGKPITVYRGKNHVDLARDFTYI 314
Y L + G+ F P TR I+ G +Y G ++D RD+ Y
Sbjct: 178 SYDLFACNGI-LFNHESPRRGETFVTRKITRAIARIVAGTQKKLYLG--NIDSKRDWGYA 234
Query: 315 DDIVKGCLGSLDTSAGPAPYRIFNLGNTSPV 345
D V+ L P Y + G T V
Sbjct: 235 KDYVRAMWAMLQQEQ-PDDY-VVATGETHEV 263
>UNIPROTKB|Q5QPP4 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 EMBL:AL031295 UniGene:Hs.632380 HGNC:HGNC:4116
HOVERGEN:HBG001396 IPI:IPI00030229 SMR:Q5QPP4
Ensembl:ENST00000429356 Uniprot:Q5QPP4
Length = 239
Score = 136 (52.9 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 57/194 (29%), Positives = 90/194 (46%)
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
DI D L +LF +F V+H A V ++Q P Y N+ G + LLE K A+
Sbjct: 2 DILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK-AHGV 60
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAH-------TYNHIY-- 260
++V++SS++VYG + +P EA T + Y +K EE+ T+N +
Sbjct: 61 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLR 120
Query: 261 GLSITGLRFFTVYG--PWGRPD--MAYFSFTRNILQGKPITVYRGKNHVDL-----ARDF 311
+ TG G P G P+ M Y S I + + + V+ G N D RD+
Sbjct: 121 YFNPTGAHASGCIGEDPQGIPNNLMPYVSQVA-IGRREALNVF-G-NDYDTEDGTGVRDY 177
Query: 312 TYIDDIVKGCLGSL 325
++ D+ KG + +L
Sbjct: 178 IHVVDLAKGHIAAL 191
Score = 46 (21.3 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 373 GDVPFTHANISSAQKEFGY 391
GDV +AN S AQ+E G+
Sbjct: 212 GDVAACYANPSLAQEELGW 230
>ASPGD|ASPL0000035245 [details] [associations]
symbol:AN2951 species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=RCA] [GO:0005575
"cellular_component" evidence=ND] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:BN001306 EMBL:AACD01000051 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
OMA:CEAILAD RefSeq:XP_660555.1 ProteinModelPortal:Q5B929
STRING:Q5B929 EnsemblFungi:CADANIAT00010133 GeneID:2873905
KEGG:ani:AN2951.2 OrthoDB:EOG4B8NNF Uniprot:Q5B929
Length = 428
Score = 88 (36.0 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNH 142
+LVTG GF+G+H +L L K VV +DN +N + + + +H
Sbjct: 49 ILVTGGLGFIGSHTTLELLKASYNVVVIDNLSNSFQSVFDRIKHLAQKHH 98
Score = 79 (32.9 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 31/126 (24%), Positives = 52/126 (41%)
Query: 169 VMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGL--NEN 226
V+H AA V +++NP Y +N++GL+ + + +++SS++VYG
Sbjct: 144 VIHFAAYKAVEESIKNPLKYYANNVSGLIDFASTLGKYGIK-TFIFSSSATVYGTLATSG 202
Query: 227 VPFSEA-----DRTDQPASLYAATKKAGEE-IAHTYNHIYGLSITGLRFFTVYGP-WGRP 279
+P E D A A T +AG I + Y + L P W
Sbjct: 203 LPLKEELCAHKDEIYHDADGVAQTIRAGSTGITNPYGRTKWMCEAILADLAASDPEWTIV 262
Query: 280 DMAYFS 285
+ YF+
Sbjct: 263 ALRYFN 268
Score = 69 (29.3 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 29/105 (27%), Positives = 50/105 (47%)
Query: 309 RDFTYIDDIVKGCLGSLDTSAG---PAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKN 365
RDF ++ D+ +G + +LD + +R FNLG +V ++V+ +E V K+
Sbjct: 320 RDFIHVTDLARGHIAALDAANERKLAENFRAFNLGTGRGHSVKEVVDAME---SVSRKQI 376
Query: 366 VIEM-PGN-GDVPFTHANISSAQKEFGYRPT---TDLQTGLKKFV 405
+ P GDV A + +Q+E ++ TD L KF+
Sbjct: 377 PVRAAPRRPGDVGSCVAVATRSQQELRWKTEKSLTDACGSLCKFL 421
>DICTYBASE|DDB_G0270184 [details] [associations]
symbol:ger "GDP-keto-6-deoxymannose 3,5-
epimerase/4-reductase" species:44689 "Dictyostelium discoideum"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0270184
EMBL:AAFI02000005 GenomeReviews:CM000150_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
RefSeq:XP_646604.1 HSSP:P32055 ProteinModelPortal:Q55C77
STRING:Q55C77 EnsemblProtists:DDB0305155 GeneID:8617576
KEGG:ddi:DDB_G0270184 InParanoid:Q55C77 ProtClustDB:CLSZ2431446
Uniprot:Q55C77
Length = 320
Score = 143 (55.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 70/317 (22%), Positives = 128/317 (40%)
Query: 114 GDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD--INDAKLLAKLFDAVAFTHVMH 171
G G+VG Y +K+ K+ N+ VF+ D + + F+ + THV+H
Sbjct: 15 GSGLVG-KGIEKY----VKETDKS--NDVWVFMRSSDCDLKSRESTRSYFEKIKPTHVIH 67
Query: 172 LAAQAGVRYA-MQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFS 230
LAA+ G ++ M+ + NI +L CK N V S+ ++ P
Sbjct: 68 LAARVGGLFSNMKYKVEFFRENIDINDNVLACCKEFNVV-KCVSCLSTCIFPDKTTYPID 126
Query: 231 EA---DRTDQPASL-YAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSF 286
E + P++ YA K+ + + YN YG T + +YGP Y
Sbjct: 127 ETMIHNGPPHPSNEGYAYAKRMIDVLNRAYNEEYGCKFTSVIPTNIYGPHDN----YHLT 182
Query: 287 TRNILQGKPITVYRG-KNHVDLA--------RDFTYIDDIVKGCLGSLDTSAGPAPYRIF 337
+++ G Y KN+ DL R F Y D+ K + +L+ +P I
Sbjct: 183 DGHVIPGLIHKTYLAMKNNQDLTIMGTGKPLRQFIYSYDLAKYFVWTLNNYEEMSPL-IL 241
Query: 338 NLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANIS--SAQKEFGYRPTT 395
++G +++ + ++ ++ K K +G T +N+ S + + P
Sbjct: 242 SVGEEDEISIADVARLITEAMEFKGKLIFDTSKADGQYKKTASNLKLKSLVPDLTFTP-- 299
Query: 396 DLQTGLKKFVRWYLSYY 412
+Q +K+ +W++ Y
Sbjct: 300 -IQQAIKESCQWFIDNY 315
Score = 44 (20.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 92 SVLVTGAAGFVGTHVSLALKK 112
+VLVTG +G VG + +K+
Sbjct: 9 TVLVTGGSGLVGKGIEKYVKE 29
>UNIPROTKB|P14060 [details] [associations]
symbol:HSD3B1 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 1" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006702 "androgen biosynthetic process"
evidence=TAS] [GO:0006703 "estrogen biosynthetic process"
evidence=TAS] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=ISS] [GO:0006694 "steroid
biosynthetic process" evidence=ISS] [GO:0030868 "smooth endoplasmic
reticulum membrane" evidence=ISS] [GO:0005758 "mitochondrial
intermembrane space" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0004769 "steroid delta-isomerase
activity" evidence=ISS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006704 "glucocorticoid biosynthetic
process" evidence=TAS] [GO:0006705 "mineralocorticoid biosynthetic
process" evidence=TAS] [GO:0008202 "steroid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] Reactome:REACT_111217 InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021 EMBL:M27137
EMBL:M28392 EMBL:M28162 EMBL:M28391 EMBL:X53321 EMBL:M35493
EMBL:M63397 EMBL:M63395 EMBL:M63396 EMBL:M38180 EMBL:X55997
EMBL:S45679 EMBL:AK291556 EMBL:BC031999 IPI:IPI00843838 PIR:A36551
RefSeq:NP_000853.1 UniGene:Hs.364941 ProteinModelPortal:P14060
SMR:P14060 STRING:P14060 PhosphoSite:P14060 DMDM:112767
PRIDE:P14060 DNASU:3283 Ensembl:ENST00000369413
Ensembl:ENST00000528909 GeneID:3283 KEGG:hsa:3283 UCSC:uc001ehv.1
CTD:3283 GeneCards:GC01P120049 H-InvDB:HIX0028579 HGNC:HGNC:5217
MIM:109715 neXtProt:NX_P14060 PharmGKB:PA29486 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 InParanoid:P14060 KO:K00070
OrthoDB:EOG4K3KWG PhylomeDB:P14060 BioCyc:MetaCyc:HS08829-MONOMER
BRENDA:1.1.1.145 Reactome:REACT_15493 SABIO-RK:P14060
BindingDB:P14060 ChEMBL:CHEMBL1958 DrugBank:DB00157
DrugBank:DB01108 GenomeRNAi:3283 NextBio:13031 ArrayExpress:P14060
Bgee:P14060 CleanEx:HS_HSD3B1 Genevestigator:P14060
GermOnline:ENSG00000203857 GO:GO:0005743 GO:GO:0005758
GO:GO:0030868 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
GO:GO:0006702 GO:GO:0006703 GO:GO:0006704 GO:GO:0006705
GO:GO:0044281 Gene3D:3.40.50.720 Uniprot:P14060
Length = 373
Score = 145 (56.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 56/199 (28%), Positives = 89/199 (44%)
Query: 90 GMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
G S LVTGA GF+G + L K + + + + + P L++ L N + V+EG
Sbjct: 3 GWSCLVTGAGGFLGQRIIRLLVKEKE-LKEIRVLDKAFGPELREEFSKLQNKTKLTVLEG 61
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
DI D L + V+ ++H A V + + + S ++ N+ G LLEAC A+
Sbjct: 62 DILDEPFLKRACQDVSV--IIHTACIIDV-FGVTHRESIMNVNVKGTQLLLEACVQASV- 117
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQPA-----SLYAATKKAGEEI---AHTYNHIYG 261
P ++ SS V G N + ++P + Y +KK E+ A+ +N G
Sbjct: 118 PVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPAPYPHSKKLAEKAVLAANGWNLKNG 177
Query: 262 --LSITGLRFFTVYGPWGR 278
L LR +YG R
Sbjct: 178 GTLYTCALRPMYIYGEGSR 196
Score = 43 (20.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
FT + AQ++ Y+P + +K V W
Sbjct: 327 FTFS-YKKAQRDLAYKPLYSWEEAKQKTVEW 356
>UNIPROTKB|Q5TDG2 [details] [associations]
symbol:HSD3B1 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 1" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
UniGene:Hs.364941 HGNC:HGNC:5217 HOGENOM:HOG000167989
HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
OMA:MAGWSCL GO:GO:0006694 GO:GO:0016853 EMBL:AL121995
IPI:IPI00246994 ProteinModelPortal:Q5TDG2 SMR:Q5TDG2 STRING:Q5TDG2
PRIDE:Q5TDG2 Ensembl:ENST00000235547 ArrayExpress:Q5TDG2
Bgee:Q5TDG2 Uniprot:Q5TDG2
Length = 375
Score = 145 (56.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 56/199 (28%), Positives = 89/199 (44%)
Query: 90 GMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
G S LVTGA GF+G + L K + + + + + P L++ L N + V+EG
Sbjct: 5 GWSCLVTGAGGFLGQRIIRLLVKEKE-LKEIRVLDKAFGPELREEFSKLQNKTKLTVLEG 63
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
DI D L + V+ ++H A V + + + S ++ N+ G LLEAC A+
Sbjct: 64 DILDEPFLKRACQDVSV--IIHTACIIDV-FGVTHRESIMNVNVKGTQLLLEACVQASV- 119
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQPA-----SLYAATKKAGEEI---AHTYNHIYG 261
P ++ SS V G N + ++P + Y +KK E+ A+ +N G
Sbjct: 120 PVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPAPYPHSKKLAEKAVLAANGWNLKNG 179
Query: 262 --LSITGLRFFTVYGPWGR 278
L LR +YG R
Sbjct: 180 GTLYTCALRPMYIYGEGSR 198
Score = 43 (20.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
FT + AQ++ Y+P + +K V W
Sbjct: 329 FTFS-YKKAQRDLAYKPLYSWEEAKQKTVEW 358
>UNIPROTKB|Q81V79 [details] [associations]
symbol:BA_0621 "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 GenomeReviews:AE016879_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000034276
OMA:DYAVEIF RefSeq:NP_843152.1 RefSeq:YP_017248.1
ProteinModelPortal:Q81V79 SMR:Q81V79 DNASU:1087994
EnsemblBacteria:EBBACT00000011110 EnsemblBacteria:EBBACT00000017957
GeneID:1087994 GeneID:2814938 KEGG:ban:BA_0621 KEGG:bar:GBAA_0621
PATRIC:18778842 ProtClustDB:CLSK865117
BioCyc:BANT261594:GJ7F-674-MONOMER Uniprot:Q81V79
Length = 317
Score = 145 (56.1 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 74/317 (23%), Positives = 132/317 (41%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
+LVTG+ G +G+ L +K R V G +N +++ ++ + G F D+
Sbjct: 4 ILVTGSLGQIGSE--LVMKLRD--VYGA---SNVIATDIRETDSEVVTS-GPFETL-DVT 54
Query: 153 DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ--- 209
D + L + ++HLAA A +NP + N+ GLV LEA + N +
Sbjct: 55 DGQKLHDIAKRNEVDTIIHLAALLSAT-AEKNPLFAWNLNMGGLVNALEAARELNCKFFT 113
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRF 269
PS + A S +N P D +P ++Y K AGE + Y+ +G+ G+RF
Sbjct: 114 PSSIGAFGPSTP--KDNTP---QDTIQRPTTMYGVNKVAGELLCDYYHQKFGVDTRGVRF 168
Query: 270 ---FTVYGP--WGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGS 324
+ P G D A + I +G T Y + D Y+ D ++ +
Sbjct: 169 PGLISYVAPPGGGTTDYAVEIYYEAIKKGT-YTSYIAEGTY---MDMMYMPDALQAIISL 224
Query: 325 LDTSAGPAPYR-IFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHAN-- 381
++ +R FN+ S ++ + +H+ ++ P + + N
Sbjct: 225 MEADPSKLVHRNAFNITAMS-FEPEQIAASIRKHIPTFTMDYAVD-PARQTIADSWPNSI 282
Query: 382 -ISSAQKEFGYRPTTDL 397
++A KE+G++ DL
Sbjct: 283 DATAAMKEWGFKAEYDL 299
>TIGR_CMR|BA_0621 [details] [associations]
symbol:BA_0621 "conserved hypothetical protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
GO:GO:0044237 HOGENOM:HOG000034276 OMA:DYAVEIF RefSeq:NP_843152.1
RefSeq:YP_017248.1 ProteinModelPortal:Q81V79 SMR:Q81V79
DNASU:1087994 EnsemblBacteria:EBBACT00000011110
EnsemblBacteria:EBBACT00000017957 GeneID:1087994 GeneID:2814938
KEGG:ban:BA_0621 KEGG:bar:GBAA_0621 PATRIC:18778842
ProtClustDB:CLSK865117 BioCyc:BANT261594:GJ7F-674-MONOMER
Uniprot:Q81V79
Length = 317
Score = 145 (56.1 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 74/317 (23%), Positives = 132/317 (41%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
+LVTG+ G +G+ L +K R V G +N +++ ++ + G F D+
Sbjct: 4 ILVTGSLGQIGSE--LVMKLRD--VYGA---SNVIATDIRETDSEVVTS-GPFETL-DVT 54
Query: 153 DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ--- 209
D + L + ++HLAA A +NP + N+ GLV LEA + N +
Sbjct: 55 DGQKLHDIAKRNEVDTIIHLAALLSAT-AEKNPLFAWNLNMGGLVNALEAARELNCKFFT 113
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRF 269
PS + A S +N P D +P ++Y K AGE + Y+ +G+ G+RF
Sbjct: 114 PSSIGAFGPSTP--KDNTP---QDTIQRPTTMYGVNKVAGELLCDYYHQKFGVDTRGVRF 168
Query: 270 ---FTVYGP--WGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGS 324
+ P G D A + I +G T Y + D Y+ D ++ +
Sbjct: 169 PGLISYVAPPGGGTTDYAVEIYYEAIKKGT-YTSYIAEGTY---MDMMYMPDALQAIISL 224
Query: 325 LDTSAGPAPYR-IFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHAN-- 381
++ +R FN+ S ++ + +H+ ++ P + + N
Sbjct: 225 MEADPSKLVHRNAFNITAMS-FEPEQIAASIRKHIPTFTMDYAVD-PARQTIADSWPNSI 282
Query: 382 -ISSAQKEFGYRPTTDL 397
++A KE+G++ DL
Sbjct: 283 DATAAMKEWGFKAEYDL 299
>UNIPROTKB|Q06952 [details] [associations]
symbol:rfbD "Probable GDP-mannose 4,6-dehydratase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 149 (57.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 61/234 (26%), Positives = 100/234 (42%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPS-LKKARKALLNNHGVFVIE-GDI 151
L+TG G G++++ L ++G V G+ ++ ++ + K F + GD+
Sbjct: 7 LITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYKDPHEEDVNFKLHYGDL 66
Query: 152 NDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACK--SANPQ 209
D+ L ++ V V +L AQ+ V + Q+P + G + LLEA + +
Sbjct: 67 TDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPEYTADVDAIGTLRLLEAIRFLGLTKK 126
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL-SITGLR 268
AS+S +YGL + +P E P S YA K I Y YG+ + G+
Sbjct: 127 TKFYQASTSELYGLVQEIPQKETTPF-YPRSPYAVAKMYAYWITINYRESYGIYACNGI- 184
Query: 269 FFTVYGPWGRPDMAYFSFTR---NILQGKPITVYRGKNHVDLARDFTYIDDIVK 319
F P TR NI QG ++ G ++D RD+ + D VK
Sbjct: 185 LFNHESPRRGETFVTRKITRGMANIAQGLEKCLFMG--NLDALRDWGHAKDYVK 236
Score = 37 (18.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 383 SSAQKEFGYRPTTDLQTGLKKFV 405
S A+KE G+ P LQ + + V
Sbjct: 326 SLAKKELGWVPEITLQQMVSEMV 348
>TIGR_CMR|VC_0243 [details] [associations]
symbol:VC_0243 "GDP-mannose 4,6-dehydratase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 149 (57.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 61/234 (26%), Positives = 100/234 (42%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPS-LKKARKALLNNHGVFVIE-GDI 151
L+TG G G++++ L ++G V G+ ++ ++ + K F + GD+
Sbjct: 7 LITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYKDPHEEDVNFKLHYGDL 66
Query: 152 NDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACK--SANPQ 209
D+ L ++ V V +L AQ+ V + Q+P + G + LLEA + +
Sbjct: 67 TDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPEYTADVDAIGTLRLLEAIRFLGLTKK 126
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL-SITGLR 268
AS+S +YGL + +P E P S YA K I Y YG+ + G+
Sbjct: 127 TKFYQASTSELYGLVQEIPQKETTPF-YPRSPYAVAKMYAYWITINYRESYGIYACNGI- 184
Query: 269 FFTVYGPWGRPDMAYFSFTR---NILQGKPITVYRGKNHVDLARDFTYIDDIVK 319
F P TR NI QG ++ G ++D RD+ + D VK
Sbjct: 185 LFNHESPRRGETFVTRKITRGMANIAQGLEKCLFMG--NLDALRDWGHAKDYVK 236
Score = 37 (18.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 383 SSAQKEFGYRPTTDLQTGLKKFV 405
S A+KE G+ P LQ + + V
Sbjct: 326 SLAKKELGWVPEITLQQMVSEMV 348
>TIGR_CMR|CPS_4199 [details] [associations]
symbol:CPS_4199 "GDP-mannose 4,6-dehydratase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0019673
eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 RefSeq:YP_270850.1
ProteinModelPortal:Q47WH2 SMR:Q47WH2 STRING:Q47WH2 GeneID:3519434
KEGG:cps:CPS_4199 PATRIC:21471261 ProtClustDB:CLSK589180
BioCyc:CPSY167879:GI48-4209-MONOMER Uniprot:Q47WH2
Length = 374
Score = 146 (56.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 61/236 (25%), Positives = 101/236 (42%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHG----VFVIEG 149
L+TG G G++++ L ++G V G+ ++ + ++ +NH F+ G
Sbjct: 8 LITGITGQDGSYLAELLLEKGYEVHGIKRRSSSLNT--ERIDHIYQDNHEKNQKFFLHYG 65
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACK--SAN 207
D+ D+ L ++ V V +L AQ+ V + + P + G + LLEA +
Sbjct: 66 DLTDSSNLTRILKDVQPDEVYNLGAQSHVAVSFECPEYTADVDAIGTLRLLEAIRFLGLE 125
Query: 208 PQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL-SITG 266
+ AS+S +YG + +P SE P S YA K I Y YG+ + G
Sbjct: 126 KKTKFYQASTSELYGEVQEIPQSETTPF-HPRSPYAVAKMYAYWIVVNYRESYGMYACNG 184
Query: 267 LRFFTVYGPWGRPDMAYFSFTR---NILQGKPITVYRGKNHVDLARDFTYIDDIVK 319
+ F P TR NI QG +Y G ++D RD+ + D V+
Sbjct: 185 I-LFNHESPRRGETFVTRKITRAIANIAQGLESCLYLG--NMDALRDWGHAKDYVR 237
>UNIPROTKB|Q5QP01 [details] [associations]
symbol:HSD3B2 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
HOGENOM:HOG000167989 HOVERGEN:HBG000014 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AL359553 UniGene:Hs.654399 HGNC:HGNC:5218 GO:GO:0016853
IPI:IPI00642070 SMR:Q5QP01 STRING:Q5QP01 Ensembl:ENST00000433745
Uniprot:Q5QP01
Length = 195
Score = 135 (52.6 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 55/198 (27%), Positives = 88/198 (44%)
Query: 90 GMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
G S LVTGA G +G + L + + + + + + P L++ L N + V+EG
Sbjct: 2 GWSCLVTGAGGLLGQRIVRLLVEEKE-LKEIRALDKAFRPELREEFSKLQNRTKLTVLEG 60
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
DI D L + V+ V+H A V + + + S ++ N+ G LLEAC A+
Sbjct: 61 DILDEPFLKRACQDVSV--VIHTACIIDV-FGVTHRESIMNVNVKGTQLLLEACVQASV- 116
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQPA-----SLYAATKKAGEEI---AHTYNHIYG 261
P ++ SS V G N + ++P + Y +KK E+ A+ +N G
Sbjct: 117 PVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPTPYPYSKKLAEKAVLAANGWNLKNG 176
Query: 262 --LSITGLRFFTVYGPWG 277
L LR +YG G
Sbjct: 177 DTLYTCALRPTYIYGEGG 194
>UNIPROTKB|I3LIF3 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:PCGLRLV EMBL:CU914342
Ensembl:ENSSSCT00000029053 Uniprot:I3LIF3
Length = 363
Score = 141 (54.7 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 64/222 (28%), Positives = 93/222 (41%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIND 153
LVTG GF+G HV L ++ + L F+ + P L++ + V I+GD+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQQEPRLCELRVFDLHLGPWLEELETGPVQ---VTAIQGDVTQ 69
Query: 154 AKLLAKLFDAVAFTHVM-HLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
A +A AVA HV+ H A V + +P + N+ G ++EAC N +
Sbjct: 70 AHEVAA---AVAGAHVVIHTAGLVDV-FGRASPETIHEVNVQGTQNVIEACVQ-NGTRFL 124
Query: 213 VWASSSSVYGL----NENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
V+ SS V G NEN P+ A R P S A + E L LR
Sbjct: 125 VYTSSMEVVGPTTRGNENTPYEAAHRHPYPRSKALAERLVLEANGRKVRGGLPLVTCALR 184
Query: 269 FFTVYGPWGRPDMA--YFSFTR---NILQGKPITVYRGKNHV 305
+YG G M Y R +L+ P +V G+ +V
Sbjct: 185 PTGIYGE-GHQIMKDFYHQGLRLGGRLLRAIPASVEHGRVYV 225
Score = 44 (20.5 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
FT + A + FGY P + + +RW
Sbjct: 325 FT-VSTDKALRHFGYEPLFSWEESRARTIRW 354
>WB|WBGene00010166 [details] [associations]
symbol:gmd-2 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic
process" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 144 (55.7 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 51/184 (27%), Positives = 80/184 (43%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGL----DNFNNYYDPSLKKARKALLNNHGVFVIE- 148
L+TG G G++++ L +G V G+ +FN L N F +
Sbjct: 37 LITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLY-GNPVTHNGSASFSLHY 95
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
GD+ D+ L KL + T + HLAAQ+ V+ + P + G + LL+A +
Sbjct: 96 GDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIHACRL 155
Query: 209 QPSIVW--ASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL-SIT 265
+ + AS+S +YG + +P SE P S YA K G I Y Y + +
Sbjct: 156 TEKVRFYQASTSELYGKVQEIPQSELTPF-YPRSPYAVAKMYGYWIVVNYREAYKMFACN 214
Query: 266 GLRF 269
G+ F
Sbjct: 215 GILF 218
>UNIPROTKB|O45583 [details] [associations]
symbol:gmd-2 "GDP-mannose 4,6 dehydratase 2" species:6239
"Caenorhabditis elegans" [GO:0019673 "GDP-mannose metabolic
process" evidence=IDA] [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 144 (55.7 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 51/184 (27%), Positives = 80/184 (43%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGL----DNFNNYYDPSLKKARKALLNNHGVFVIE- 148
L+TG G G++++ L +G V G+ +FN L N F +
Sbjct: 37 LITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLY-GNPVTHNGSASFSLHY 95
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
GD+ D+ L KL + T + HLAAQ+ V+ + P + G + LL+A +
Sbjct: 96 GDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIHACRL 155
Query: 209 QPSIVW--ASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL-SIT 265
+ + AS+S +YG + +P SE P S YA K G I Y Y + +
Sbjct: 156 TEKVRFYQASTSELYGKVQEIPQSELTPF-YPRSPYAVAKMYGYWIVVNYREAYKMFACN 214
Query: 266 GLRF 269
G+ F
Sbjct: 215 GILF 218
>UNIPROTKB|P71790 [details] [associations]
symbol:gmdA "GDP-D-mannose dehydratase gmdA (GDP-mannose
4,6 dehydratase) (GMD)" species:83332 "Mycobacterium tuberculosis
H37Rv" [GO:0005886 "plasma membrane" evidence=IDA] [GO:0071456
"cellular response to hypoxia" evidence=IEP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005886
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842576 GO:GO:0071456 GO:GO:0005622
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG HSSP:P32054 EMBL:CP003248
PIR:B70714 RefSeq:NP_216027.1 RefSeq:YP_006514898.1
ProteinModelPortal:P71790 SMR:P71790 PRIDE:P71790
EnsemblBacteria:EBMYCT00000003919 GeneID:13320108 GeneID:886529
KEGG:mtu:Rv1511 KEGG:mtv:RVBD_1511 PATRIC:18151910
TubercuList:Rv1511 ProtClustDB:CLSK791213 Uniprot:P71790
Length = 340
Score = 143 (55.4 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 69/249 (27%), Positives = 101/249 (40%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGL----DNFNN------YYDPSLKKARKALLNNHG 143
L+TG G G++++ L +G V GL FN Y DP AR
Sbjct: 5 LITGITGQDGSYLAELLLAKGYEVHGLIRRASTFNTSRIDHLYVDPHQPGAR-------- 56
Query: 144 VFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEAC 203
+F+ GD+ D L L + V +LAAQ+ VR + P + G + LLEA
Sbjct: 57 LFLHYGDLIDGTRLVTLLSTIEPDEVYNLAAQSHVRVSFDEPVHTGDTTGMGSMRLLEAV 116
Query: 204 KSANPQPSIVWASSSSVYGLNENVPFSEADRTD-QPASLYAATKKAGEEIAHTYNHIYGL 262
+ + ASSS ++G + P + + T P S Y A K Y YGL
Sbjct: 117 RLSRVHCRFYQASSSEMFGAS---PPPQNELTPFYPRSPYGAAKVYSYWATRNYREAYGL 173
Query: 263 -SITGLRFFTVYGPWGRPDMAYFSFTRNILQ---GKPITVYRGKNHVDLARDFTYIDDIV 318
++ G+ F P TR + + G VY G ++D RD+ Y + V
Sbjct: 174 FAVNGI-LFNHESPRRGETFVTRKITRAVARIKAGIQSEVYMG--NLDAVRDWGYAPEYV 230
Query: 319 KGCLGSLDT 327
+G L T
Sbjct: 231 EGMWRMLQT 239
>MGI|MGI:96233 [details] [associations]
symbol:Hsd3b1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 1" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=ISO] [GO:0004769 "steroid delta-isomerase activity"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=ISO]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96233 GO:GO:0016021 GO:GO:0005739
CTD:3283 eggNOG:COG0451 HOVERGEN:HBG000014 KO:K00070 GO:GO:0003854
GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720 EMBL:M58567
EMBL:BC052659 IPI:IPI00229070 PIR:I49762 RefSeq:NP_032319.1
UniGene:Mm.140811 ProteinModelPortal:P24815 SMR:P24815
STRING:P24815 PhosphoSite:P24815 PaxDb:P24815 PRIDE:P24815
Ensembl:ENSMUST00000107016 GeneID:15492 KEGG:mmu:15492
InParanoid:P24815 OMA:MAGWSCL SABIO-RK:P24815 NextBio:288366
Bgee:P24815 Genevestigator:P24815 GermOnline:ENSMUSG00000027871
GO:GO:0005789 GO:GO:0031966 GO:GO:0006694 Uniprot:P24815
Length = 373
Score = 140 (54.3 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 47/137 (34%), Positives = 65/137 (47%)
Query: 90 GMSVLVTGAAGFVGTHV--SLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVI 147
G S LVTGA GFVG + L +K V LD + P K+ L V V+
Sbjct: 3 GWSCLVTGAGGFVGQRIIKMLVQEKELQEVRALDKV---FRPETKEEFSKLQTKTKVTVL 59
Query: 148 EGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSAN 207
EGDI DA+ L + ++ V+H AA V + + + N+ G LLEAC A+
Sbjct: 60 EGDILDAQCLRRACQGISV--VIHTAAVIDVTGVIPR-QTILDVNLKGTQNLLEACVQAS 116
Query: 208 PQPSIVWASSSSVYGLN 224
P+ ++ SS V G N
Sbjct: 117 V-PAFIFCSSVDVAGPN 132
Score = 44 (20.5 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
FT + AQ++ GY P + + +K W
Sbjct: 327 FTFS-YKKAQRDLGYEPLVNWEEAKQKTSEW 356
>UNIPROTKB|Q4K5C5 [details] [associations]
symbol:PFL_5490 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167992 RefSeq:YP_262558.1 ProteinModelPortal:Q4K5C5
STRING:Q4K5C5 GeneID:3479881 KEGG:pfl:PFL_5490 PATRIC:19880467
OMA:EPNPAND ProtClustDB:CLSK881263
BioCyc:PFLU220664:GIX8-5527-MONOMER Uniprot:Q4K5C5
Length = 311
Score = 141 (54.7 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 79/313 (25%), Positives = 149/313 (47%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIND 153
L+TG GF G +V+ L++ G + G + S R+A G F + DI D
Sbjct: 11 LITGLEGFTGRYVADELRRSGYEIFGTRH-------SGADEREA-----GCFRV--DICD 56
Query: 154 AKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP-SI 212
L ++ + V V+HLAA + V + + + +N+ G LLEA + P ++
Sbjct: 57 LAALRRVVEEVEPEVVVHLAAISFVAHGEAD--AIYRANVVGTRNLLEALAGLSRTPRAV 114
Query: 213 VWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTV 272
+ ASS++VYG N V + + PA+ YA +K A E +A + H L I R F
Sbjct: 115 LLASSANVYG-NAPVELIDESVSLAPANDYAVSKLAMEYMARLWMH--RLPIVIARPFNY 171
Query: 273 YGPWGRPDMAYFSFTRNI--LQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTSAG 330
G G+ ++F + + Q + + G ++D+ RDF+ + + + L+
Sbjct: 172 TGV-GQA--SHFLIPKIVSHFQRRASVIELG--NLDVERDFSDVRVVALAYVRLLEVV-- 224
Query: 331 PAPYRIFNLGNTSPVTVPKLVNILER---HLKVKAKKNVIEMPGNGDVPFTHANISSAQK 387
PA ++ N+G+ V++ +++ ++ H +++ + N + N +V ++S ++
Sbjct: 225 PAG-QVVNVGSGQVVSLREVLAMMSGISGH-EIEVRVNPEFVRAN-EVKRLQGDVSRLKE 281
Query: 388 EFG-YRPTTDLQT 399
G Y+PT ++T
Sbjct: 282 LIGGYQPTPLMET 294
>TAIR|locus:2080933 [details] [associations]
symbol:MUR1 "MURUS 1" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS;IDA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009826 "unidimensional cell growth" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0006007 "glucose catabolic process"
evidence=RCA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005525
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009826 EMBL:AL132980
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 ProtClustDB:PLN02653
EMBL:U81805 EMBL:BT025710 EMBL:AY084574 IPI:IPI00519785 PIR:T45747
RefSeq:NP_190685.2 UniGene:At.23910 PDB:1N7G PDB:1N7H PDBsum:1N7G
PDBsum:1N7H ProteinModelPortal:P93031 SMR:P93031 STRING:P93031
PaxDb:P93031 PRIDE:P93031 EnsemblPlants:AT3G51160.1 GeneID:824280
KEGG:ath:AT3G51160 GeneFarm:4170 TAIR:At3g51160 InParanoid:P93031
OMA:DAIRDWG PhylomeDB:P93031 BioCyc:MetaCyc:AT3G51160-MONOMER
EvolutionaryTrace:P93031 Genevestigator:P93031 GermOnline:AT3G51160
Uniprot:P93031
Length = 373
Score = 142 (55.0 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 86/337 (25%), Positives = 143/337 (42%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGL----DNFNN------YYDPSLKKARKALLNNHG 143
L+TG G G++++ L +G V GL NFN Y DP KAL+ H
Sbjct: 32 LITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPH--NVNKALMKLH- 88
Query: 144 VFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIA-GLVTLLEA 202
D+ DA L + D + V +LAAQ+ V + + P Y +A G + LLEA
Sbjct: 89 ----YADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIP-DYTADVVATGALRLLEA 143
Query: 203 CKS--ANPQPSIVW--ASSSSVYGLNENVPFSEADRTD-QPASLYAATKKAGEEIAHTYN 257
+S + ++ + A SS ++G + P +++ T P S YAA+K A Y
Sbjct: 144 VRSHTIDSGRTVKYYQAGSSEMFG---STPPPQSETTPFHPRSPYAASKCAAHWYTVNYR 200
Query: 258 HIYGL-SITGLRFFTVYGPWGRPDMAYFSFTR---NILQGKPITVYRGKNHVDLARDFTY 313
YGL + G+ F P + TR I G ++ G ++ +RD+ +
Sbjct: 201 EAYGLFACNGI-LFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLG--NLQASRDWGF 257
Query: 314 IDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGN- 372
D V+ L P Y + TV + +++ +L + K + +E+
Sbjct: 258 AGDYVEAMWLMLQQEK-PDDYVV---ATEEGHTVEEFLDVSFGYLGLNWK-DYVEIDQRY 312
Query: 373 ---GDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVR 406
+V + S A++ G++P Q G +K V+
Sbjct: 313 FRPAEVDNLQGDASKAKEVLGWKP----QVGFEKLVK 345
>TIGR_CMR|SO_1745 [details] [associations]
symbol:SO_1745 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:211586 "Shewanella
oneidensis MR-1" [GO:0006694 "steroid biosynthetic process"
evidence=ISS] [GO:0016229 "steroid dehydrogenase activity"
evidence=ISS] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GO:GO:0016853 EMBL:AE014299 GenomeReviews:AE014299_GR
OMA:PQVTRYR ProtClustDB:CLSK906403 RefSeq:NP_717355.1
ProteinModelPortal:Q8EG63 GeneID:1169523 KEGG:son:SO_1745
PATRIC:23523115 BioCyc:MetaCyc:MONOMER-17300 Uniprot:Q8EG63
Length = 387
Score = 132 (51.5 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 73/276 (26%), Positives = 118/276 (42%)
Query: 95 VTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDINDA 154
VTGA GF+G + L G V G Y + +AL GV +++GD+ +
Sbjct: 58 VTGAGGFLGKAICQRLIAAGIKVTGFAR-GRYLE------LEAL----GVTMVQGDLVNP 106
Query: 155 KLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSAN------- 207
+ + + V H+A++AGV + SY N+ G ++ ACK+
Sbjct: 107 EQVKQAMQGCDI--VFHVASKAGV---WGDRDSYFCPNVKGAANVIAACKALKINKLVYT 161
Query: 208 PQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEI------AHTYNHIYG 261
PS+ +A G+NE+ P+ A R + YA +K E++ + + N Y
Sbjct: 162 STPSVTFAGEDES-GINESTPY--ASRF---LNYYAHSKAIAEKMMLDANQSSSTNAAYV 215
Query: 262 LSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKG- 320
L LR ++GP P + R L GK V R VD YID+
Sbjct: 216 LKTVALRPHLIWGP-NDPHLVPRVLARGRL-GKLKLVGREDKLVDTI----YIDNAAYAH 269
Query: 321 CLGSLDT-SAGP-APYRIFNLGNTSPVTVPKLVNIL 354
L +L+ A P + + + N PVT+ K++N++
Sbjct: 270 VLAALELCQATPKCQGKAYFISNDEPVTMAKMLNMI 305
Score = 52 (23.4 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 8/23 (34%), Positives = 17/23 (73%)
Query: 381 NISSAQKEFGYRPTTDLQTGLKK 403
+IS+A+++FGY ++ G+K+
Sbjct: 360 DISAAKQDFGYSALVSIEEGMKR 382
>UNIPROTKB|Q4K8G6 [details] [associations]
symbol:PFL_4375 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0044237
HOGENOM:HOG000218208 RefSeq:YP_261467.1 ProteinModelPortal:Q4K8G6
STRING:Q4K8G6 GeneID:3478498 KEGG:pfl:PFL_4375 PATRIC:19878178
OMA:VFGAPFP ProtClustDB:CLSK2301589
BioCyc:PFLU220664:GIX8-4410-MONOMER Uniprot:Q4K8G6
Length = 324
Score = 140 (54.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 61/212 (28%), Positives = 97/212 (45%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKA---RKAL--LNNHGVF 145
M++LVTGAAGF+G + AL +RG L + + P + R + L++ V
Sbjct: 1 MNILVTGAAGFLGRRLIQALLERGS----LTDRHGQLHPIQRITAFDRDPVQGLDDPRVQ 56
Query: 146 VIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKS 205
V GDI D ++LA L DA + HLAA + A + + N + LLE +
Sbjct: 57 VKGGDITDPQVLANLIDANT-QGIFHLAAVVSSQ-AESDFDLGMRVNFSATQGLLERARQ 114
Query: 206 ANPQPSIVWASSSSVYGLNENVPFSEAD-RTDQPASLYAATKKAGEEIAHTYNHIYGLSI 264
P V SS +V+G +P + D + P S Y K + + Y+ +
Sbjct: 115 LGTCPKWVMTSSVAVFG--GQLPDTVGDDQVWSPQSSYGTQKAMNDLLLADYSRRGFVDG 172
Query: 265 TGLRFFTVYGPWGRPDMAYFSFTRNILQGKPI 296
LR T+ G+P++A SF I++ +P+
Sbjct: 173 RSLRMPTIVVRPGKPNLAASSFASGIIR-EPL 203
>FB|FBgn0031661 [details] [associations]
symbol:Gmd "GDP-mannose 4,6-dehydratase" species:7227
"Drosophila melanogaster" [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=ISS;IDA] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=IMP] [GO:2000035 "regulation of
stem cell division" evidence=IMP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:AE014134 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0007219 GO:GO:0005622 GO:GO:2000035
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
GO:GO:0042350 CTD:33716 EMBL:AM231687 EMBL:AY089519
RefSeq:NP_608888.2 UniGene:Dm.4967 ProteinModelPortal:Q9VMW9
SMR:Q9VMW9 STRING:Q9VMW9 PaxDb:Q9VMW9 EnsemblMetazoa:FBtr0079049
GeneID:33716 KEGG:dme:Dmel_CG8890 FlyBase:FBgn0031661
InParanoid:Q9VMW9 OrthoDB:EOG40K6FB PhylomeDB:Q9VMW9
GenomeRNAi:33716 NextBio:784930 Bgee:Q9VMW9 GermOnline:CG8890
Uniprot:Q9VMW9
Length = 395
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 80/325 (24%), Positives = 132/325 (40%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGL----DNFNN------YYDPSLKKARKALLNNHG 143
L+TG G G++++ L K+ V G+ FN Y DP K + L+
Sbjct: 50 LITGITGQDGSYLAEFLLKKDYEVHGIIRRASTFNTTRIEHLYADPKAHKGGRMKLHY-- 107
Query: 144 VFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEAC 203
GD+ D+ L K+ + V T + +LAAQ+ V+ + + G + +L+A
Sbjct: 108 -----GDMTDSSSLVKIINMVKPTEIYNLAAQSHVKVSFDLSEYTAEVDAVGTLRILDAI 162
Query: 204 KSANPQPSIVW--ASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYG 261
++ + ++ + AS+S +YG P +E P S YA K G I Y Y
Sbjct: 163 RTCGMEKNVRFYQASTSELYGKVVETPQNE-QTPFYPRSPYACAKMYGFWIVINYREAYN 221
Query: 262 L-SITGLRFFTVYGPWGRPDMAYFSFTRNI--LQGKPITVYRGKNHVDLARDFTYIDDIV 318
+ + G+ F P + TR++ + K + + N +D RD+ + D V
Sbjct: 222 MYACNGI-LFNHESPRRGENFVTRKITRSVAKIYHKQMEYFELGN-LDSKRDWGHASDYV 279
Query: 319 KGCLGSLDTSAGPAPYRIFNLGNTSPVT--VPKLVNILERHLKVKAKKNVIEMPGNGDVP 376
+ L + P+ Y + G T V V ++R + K K V E+
Sbjct: 280 EAMWMMLQRES-PSDY-VIATGETHSVREFVEAAFKHIDREITWKGK-GVDEVGVENGTG 336
Query: 377 FTHANISSAQKEFGYRPT-TDLQTG 400
I+ K F RPT DL G
Sbjct: 337 IVRVRINP--KYF--RPTEVDLLQG 357
>UNIPROTKB|I3L2H6 [details] [associations]
symbol:HSD3B7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 EMBL:AC135048 HGNC:HGNC:18324 GO:GO:0047016
GO:GO:0001558 Ensembl:ENST00000574447 Bgee:I3L2H6 Uniprot:I3L2H6
Length = 176
Score = 126 (49.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 45/147 (30%), Positives = 69/147 (46%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIND 153
LVTG GF+G HV L +R + L F+ + P L++ + + V I+GD+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVR---VTAIQGDVTQ 69
Query: 154 AKLLAKLFDAVAFTHVM-HLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
A +A AVA HV+ H A V + +P + N+ G ++EAC + +
Sbjct: 70 AHEVAA---AVAGAHVVIHTAGLVDV-FGRASPKTIHEVNVQGTRNVIEACVQTGTR-FL 124
Query: 213 VWASSSSVYGLN-ENVPFSEADRTDQP 238
V+ SS V G N + PF + D P
Sbjct: 125 VYTSSMEVVGPNTKGHPFYRGNE-DTP 150
>MGI|MGI:109598 [details] [associations]
symbol:Hsd3b6 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 6" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=ISO] [GO:0004769 "steroid delta-isomerase activity"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=ISO] [GO:0005758
"mitochondrial intermembrane space" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0006700 "C21-steroid
hormone biosynthetic process" evidence=ISO] [GO:0006702 "androgen
biosynthetic process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0034757 "negative regulation of iron ion transport"
evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=ISO] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:109598 GO:GO:0016021
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
BRENDA:1.1.1.145 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0031966 GO:GO:0006694
BRENDA:5.3.3.1 EMBL:AL606755 GeneTree:ENSGT00550000074557 CTD:15497
EMBL:AF031170 EMBL:AK142267 EMBL:CH466620 IPI:IPI00420666
RefSeq:NP_038849.2 UniGene:Mm.14435 ProteinModelPortal:O35469
SMR:O35469 STRING:O35469 PRIDE:O35469 Ensembl:ENSMUST00000029463
Ensembl:ENSMUST00000170847 GeneID:15497 KEGG:mmu:15497
InParanoid:Q3UQN7 OMA:FIHISST NextBio:288386 Bgee:O35469
Genevestigator:O35469 GermOnline:ENSMUSG00000027869 Uniprot:O35469
Length = 373
Score = 137 (53.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 43/135 (31%), Positives = 67/135 (49%)
Query: 90 GMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
G S LVTGA GF+G + L + D + + + ++ P ++ L N V V+EG
Sbjct: 3 GWSCLVTGAGGFLGQRIVQLLMQEKD-LEEIRVLDKFFRPETREQFFNLDTNIKVTVLEG 61
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
DI D + L K ++ V+H AA V + + + N+ G LLEAC A+
Sbjct: 62 DILDTQYLRKACQGISV--VIHTAAVIDVTGVIPR-QTILDVNLKGTQNLLEACIQASV- 117
Query: 210 PSIVWASSSSVYGLN 224
P+ +++SS V G N
Sbjct: 118 PAFIFSSSVDVAGPN 132
Score = 44 (20.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 14/62 (22%), Positives = 29/62 (46%)
Query: 346 TVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFV 405
TV L++ + R + ++++ + G+ FT + AQ++ GY P + +K
Sbjct: 300 TVSFLLSPIYRFIP-PFNRHLVTLTGS---TFTFS-YKKAQRDLGYEPLVSWEEAKQKTS 354
Query: 406 RW 407
W
Sbjct: 355 EW 356
>RGD|1308676 [details] [associations]
symbol:Hsd3b2 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 2" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA;ISO;IDA] [GO:0004769 "steroid delta-isomerase
activity" evidence=ISO;IDA] [GO:0005496 "steroid binding"
evidence=IPI] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0006082 "organic
acid metabolic process" evidence=IEP] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;ISO] [GO:0006701 "progesterone
biosynthetic process" evidence=IEP;IDA] [GO:0006703 "estrogen
biosynthetic process" evidence=IEP] [GO:0008202 "steroid metabolic
process" evidence=IDA] [GO:0008207 "C21-steroid hormone metabolic
process" evidence=IDA] [GO:0008584 "male gonad development"
evidence=IEP] [GO:0008585 "female gonad development" evidence=IEP]
[GO:0009635 "response to herbicide" evidence=IEP] [GO:0010033
"response to organic substance" evidence=IEP] [GO:0010038 "response
to metal ion" evidence=IEP] [GO:0010226 "response to lithium ion"
evidence=IEP] [GO:0010288 "response to lead ion" evidence=IEP]
[GO:0014070 "response to organic cyclic compound" evidence=IEP]
[GO:0014823 "response to activity" evidence=IEP] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016101 "diterpenoid
metabolic process" evidence=IEP] [GO:0017143 "insecticide metabolic
process" evidence=IEP] [GO:0018879 "biphenyl metabolic process"
evidence=IEP] [GO:0018894 "dibenzo-p-dioxin metabolic process"
evidence=IEP] [GO:0018958 "phenol-containing compound metabolic
process" evidence=IEP] [GO:0018970 "toluene metabolic process"
evidence=IEP] [GO:0021766 "hippocampus development" evidence=IEP]
[GO:0030061 "mitochondrial crista" evidence=IDA] [GO:0030325
"adrenal gland development" evidence=IEP] [GO:0030728 "ovulation"
evidence=IEP] [GO:0030851 "granulocyte differentiation"
evidence=IEP] [GO:0031667 "response to nutrient levels"
evidence=IEP] [GO:0032355 "response to estradiol stimulus"
evidence=IEP] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEP] [GO:0033197 "response to vitamin E" evidence=IEP]
[GO:0033327 "Leydig cell differentiation" evidence=IEP] [GO:0033591
"response to L-ascorbic acid" evidence=IEP] [GO:0035410
"dihydrotestosterone 17-beta-dehydrogenase activity" evidence=IDA]
[GO:0042493 "response to drug" evidence=IEP] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0043279 "response to alkaloid" evidence=IEP] [GO:0044344
"cellular response to fibroblast growth factor stimulus"
evidence=IEP] [GO:0045471 "response to ethanol" evidence=IEP]
[GO:0046470 "phosphatidylcholine metabolic process" evidence=IEP]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0050756 "fractalkine metabolic process" evidence=IEP]
[GO:0051287 "NAD binding" evidence=IDA] [GO:0051412 "response to
corticosterone stimulus" evidence=IEP] [GO:0051592 "response to
calcium ion" evidence=IEP] [GO:0060135 "maternal process involved
in female pregnancy" evidence=IEP] [GO:0060992 "response to
fungicide" evidence=IEP] [GO:0061370 "testosterone biosynthetic
process" evidence=IEP] [GO:0070301 "cellular response to hydrogen
peroxide" evidence=IEP] [GO:0070542 "response to fatty acid"
evidence=IEP] [GO:0071236 "cellular response to antibiotic"
evidence=IEP] [GO:0071288 "cellular response to mercury ion"
evidence=IEP] [GO:0071320 "cellular response to cAMP" evidence=IEP]
[GO:0071333 "cellular response to glucose stimulus" evidence=IEP]
[GO:0071371 "cellular response to gonadotropin stimulus"
evidence=IEP] [GO:0071372 "cellular response to
follicle-stimulating hormone stimulus" evidence=IEP] [GO:0071373
"cellular response to luteinizing hormone stimulus" evidence=IEP]
[GO:0071406 "cellular response to methylmercury" evidence=IEP]
[GO:0071549 "cellular response to dexamethasone stimulus"
evidence=IEP] [GO:0071560 "cellular response to transforming growth
factor beta stimulus" evidence=IEP] InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 RGD:1308676 GO:GO:0016021
GO:GO:0046686 GO:GO:0021766 CTD:3283 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 GO:GO:0003854
GO:GO:0004769 GO:GO:0006703 Gene3D:3.40.50.720 GO:GO:0005789
EMBL:M38178 EMBL:BC086578 EMBL:DQ515797 IPI:IPI00362470 PIR:A39051
RefSeq:NP_001007720.3 UniGene:Rn.128814 ProteinModelPortal:P22071
STRING:P22071 Ensembl:ENSRNOT00000026325 GeneID:360348
KEGG:rno:360348 UCSC:RGD:1308676 InParanoid:P22071 OMA:WVFPRIA
BRENDA:5.3.3.1 NextBio:672781 ArrayExpress:P22071
Genevestigator:P22071 GermOnline:ENSRNOG00000019454 GO:GO:0030061
GO:GO:0035410 GO:GO:0051287 GO:GO:0005496 GO:GO:0030325
GO:GO:0018879 GO:GO:0071236 GO:GO:0071320 GO:GO:0071549
GO:GO:0044344 GO:GO:0071372 GO:GO:0071333 GO:GO:0070301
GO:GO:0032869 GO:GO:0071373 GO:GO:0071288 GO:GO:0071406
GO:GO:0071560 GO:GO:0018894 GO:GO:0016101 GO:GO:0008585
GO:GO:0050756 GO:GO:0030851 GO:GO:0017143 GO:GO:0033327
GO:GO:0060135 GO:GO:0006082 GO:GO:0030728 GO:GO:0018958
GO:GO:0046470 GO:GO:0006701 GO:GO:0014823 GO:GO:0043279
GO:GO:0046685 GO:GO:0051592 GO:GO:0051412 GO:GO:0042493
GO:GO:0032355 GO:GO:0045471 GO:GO:0070542 GO:GO:0060992
GO:GO:0009635 GO:GO:0033591 GO:GO:0010288 GO:GO:0010226
GO:GO:0033197 GO:GO:0061370 GO:GO:0018970 Uniprot:P22071
Length = 373
Score = 139 (54.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 44/137 (32%), Positives = 66/137 (48%)
Query: 90 GMSVLVTGAAGFVGTHV--SLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVI 147
G S LVTGA GFVG + L +K V LD + P K+ L V ++
Sbjct: 3 GWSCLVTGAGGFVGQRIIRMLVQEKELQEVRALDKV---FRPETKEEFSKLQTKAKVTML 59
Query: 148 EGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSAN 207
EGDI DA+ L + ++ V+H AA V + + + + N+ G +LEAC A+
Sbjct: 60 EGDILDAQYLRRACQGISV--VIHTAAVIDVSHVLPR-QTILDVNLKGTQNILEACVEAS 116
Query: 208 PQPSIVWASSSSVYGLN 224
P+ ++ S+ V G N
Sbjct: 117 V-PAFIYCSTVDVAGPN 132
Score = 40 (19.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
FT + AQ++ GY P + +K W
Sbjct: 327 FTFS-YKKAQRDLGYVPLVSWEEAKQKTSEW 356
>UNIPROTKB|P0AC88 [details] [associations]
symbol:gmd "GDP-mannose 4,6-dehydratase" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0009242 "colanic acid biosynthetic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 UniPathway:UPA00980 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0005622 GO:GO:0009103 GO:GO:0019673 GO:GO:0042351 EMBL:U38473
GO:GO:0009242 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 PIR:D64971 RefSeq:NP_416557.1 RefSeq:YP_490295.1
PDB:1DB3 PDBsum:1DB3 ProteinModelPortal:P0AC88 SMR:P0AC88
DIP:DIP-48216N IntAct:P0AC88 EnsemblBacteria:EBESCT00000004343
EnsemblBacteria:EBESCT00000015616 GeneID:12930696 GeneID:946562
KEGG:ecj:Y75_p2016 KEGG:eco:b2053 PATRIC:32119439 EchoBASE:EB1735
EcoGene:EG11787 HOGENOM:HOG000168003 ProtClustDB:CLSK880276
BioCyc:EcoCyc:GDPMANDEHYDRA-MONOMER
BioCyc:ECOL316407:JW2038-MONOMER
BioCyc:MetaCyc:GDPMANDEHYDRA-MONOMER EvolutionaryTrace:P0AC88
Genevestigator:P0AC88 Uniprot:P0AC88
Length = 373
Score = 138 (53.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 61/236 (25%), Positives = 98/236 (41%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGL----DNFNNYYDPSLKKARKALLNNHGVFVIEG 149
L+TG G G++++ L ++G V G+ +FN + + N + G
Sbjct: 6 LITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTC--NPKFHLHYG 63
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACK--SAN 207
D++D L ++ V V +L A + V + ++P + G + LLEA +
Sbjct: 64 DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLE 123
Query: 208 PQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL-SITG 266
+ AS+S +YGL + +P E P S YA K I Y YG+ + G
Sbjct: 124 KKTRFYQASTSELYGLVQEIPQKETTPF-YPRSPYAVAKLYAYWITVNYRESYGMYACNG 182
Query: 267 LRFFTVYGPWGRPDMAYFSFTR---NILQGKPITVYRGKNHVDLARDFTYIDDIVK 319
+ F P TR NI QG +Y G ++D RD+ + D VK
Sbjct: 183 I-LFNHESPRRGETFVTRKITRAIANIAQGLESCLYLG--NMDSLRDWGHAKDYVK 235
>UNIPROTKB|P26439 [details] [associations]
symbol:HSD3B2 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IDA] [GO:0006694 "steroid
biosynthetic process" evidence=IDA] [GO:0004769 "steroid
delta-isomerase activity" evidence=IDA] [GO:0030868 "smooth
endoplasmic reticulum membrane" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0005758
"mitochondrial intermembrane space" evidence=ISS] [GO:0031966
"mitochondrial membrane" evidence=NAS] [GO:0005783 "endoplasmic
reticulum" evidence=NAS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006702 "androgen biosynthetic process"
evidence=TAS] [GO:0006704 "glucocorticoid biosynthetic process"
evidence=TAS] [GO:0006705 "mineralocorticoid biosynthetic process"
evidence=TAS] [GO:0008202 "steroid metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021 eggNOG:COG0451
HOVERGEN:HBG000014 KO:K00070 BRENDA:1.1.1.145 Reactome:REACT_15493
DrugBank:DB00157 DrugBank:DB01108 GO:GO:0005743 GO:GO:0005758
GO:GO:0030868 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
GO:GO:0006702 GO:GO:0006704 GO:GO:0006705 GO:GO:0044281
Gene3D:3.40.50.720 OMA:WVFPRIA EMBL:M77144 EMBL:M67466
EMBL:CR627415 EMBL:AK222997 EMBL:AL359553 EMBL:CH471122
EMBL:BC038419 EMBL:BC131488 EMBL:S80140 EMBL:S60309 EMBL:S60310
IPI:IPI00218494 IPI:IPI00465001 PIR:A39488 RefSeq:NP_000189.1
RefSeq:NP_001159592.1 UniGene:Hs.654399 ProteinModelPortal:P26439
SMR:P26439 STRING:P26439 PhosphoSite:P26439 DMDM:112770
PRIDE:P26439 DNASU:3284 Ensembl:ENST00000369416
Ensembl:ENST00000543831 GeneID:3284 KEGG:hsa:3284 UCSC:uc001ehs.3
UCSC:uc001ehu.3 CTD:3284 GeneCards:GC01P119957 HGNC:HGNC:5218
MIM:201810 MIM:613890 neXtProt:NX_P26439 Orphanet:90791
Orphanet:1331 Orphanet:3185 PharmGKB:PA29487 InParanoid:P26439
PhylomeDB:P26439 BioCyc:MetaCyc:HS10943-MONOMER BindingDB:P26439
ChEMBL:CHEMBL3670 GenomeRNAi:3284 NextBio:13035 ArrayExpress:P26439
Bgee:P26439 CleanEx:HS_HSD3B2 Genevestigator:P26439
GermOnline:ENSG00000203859 Uniprot:P26439
Length = 372
Score = 135 (52.6 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 55/198 (27%), Positives = 88/198 (44%)
Query: 90 GMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
G S LVTGA G +G + L + + + + + + P L++ L N + V+EG
Sbjct: 2 GWSCLVTGAGGLLGQRIVRLLVEEKE-LKEIRALDKAFRPELREEFSKLQNRTKLTVLEG 60
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
DI D L + V+ V+H A V + + + S ++ N+ G LLEAC A+
Sbjct: 61 DILDEPFLKRACQDVSV--VIHTACIIDV-FGVTHRESIMNVNVKGTQLLLEACVQASV- 116
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQPA-----SLYAATKKAGEEI---AHTYNHIYG 261
P ++ SS V G N + ++P + Y +KK E+ A+ +N G
Sbjct: 117 PVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPTPYPYSKKLAEKAVLAANGWNLKNG 176
Query: 262 --LSITGLRFFTVYGPWG 277
L LR +YG G
Sbjct: 177 DTLYTCALRPTYIYGEGG 194
Score = 43 (20.2 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
FT + AQ++ Y+P + +K V W
Sbjct: 326 FTFS-YKKAQRDLAYKPLYSWEEAKQKTVEW 355
>UNIPROTKB|E1C279 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0008203 GO:GO:0007224 KO:K07748
CTD:50814 EMBL:AADN02013506 IPI:IPI00684598 RefSeq:XP_420279.1
ProteinModelPortal:E1C279 Ensembl:ENSGALT00000032336 GeneID:422302
KEGG:gga:422302 NextBio:20824951 Uniprot:E1C279
Length = 346
Score = 114 (45.2 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 53/204 (25%), Positives = 88/204 (43%)
Query: 149 GDI-NDAKLLAKLFD-AVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSA 206
GD+ N LL L D +VAF H A+ A + N + N G ++EACK A
Sbjct: 55 GDLCNKEALLPALQDVSVAF----HCASPAP---SSDNKELFYKVNFMGTKAVIEACKEA 107
Query: 207 NPQPSIVWASSSSVY-GLNENVPFSEADRTDQPASLYAATKKAGE-EIAHTYNHIYGLSI 264
Q ++ +S+S V+ G + + +P Y TK E E+ +
Sbjct: 108 GVQKLVLTSSASVVFEGTDIKNGTEDLPYAKKPIDYYTETKILQEKEVLSANDPDNNFFT 167
Query: 265 TGLRFFTVYGPWGRPDMAYFSFTRNILQGK-PITVYRGKNHVDLARDFTYIDDIVKGCLG 323
T +R ++GP P + + GK + GKN VD FTY++++V G +
Sbjct: 168 TAIRPHGIFGPRD-PQLVPI-LIQAAKSGKMKFIIGDGKNLVD----FTYVENVVHGHIL 221
Query: 324 SLDTSAGPAPY--RIFNLGNTSPV 345
+ + +P + F++ N P+
Sbjct: 222 AAEHLRKDSPVCGKAFHITNDEPI 245
Score = 53 (23.7 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 87 RSGGMSVLVTGAAGFVGTHVSLALKKRGDGV 117
RS G +V G +GF+G H+ L +G V
Sbjct: 6 RSTGKKCVVIGGSGFLGQHMVEKLLDKGYSV 36
Score = 44 (20.5 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 7/32 (21%), Positives = 17/32 (53%)
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRWY 408
F + + A+++ GY+P L + + ++ Y
Sbjct: 307 FHYYSCERAKRDMGYKPVVSLDEAIDRTLQSY 338
>MGI|MGI:96234 [details] [associations]
symbol:Hsd3b2 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 2" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96234 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
BRENDA:1.1.1.145 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0031966 GO:GO:0006694
BRENDA:5.3.3.1 CTD:3284 EMBL:AL606755 EMBL:BC026757 EMBL:BC040397
EMBL:M75886 IPI:IPI00230105 RefSeq:NP_694873.2 UniGene:Mm.482364
ProteinModelPortal:P26149 SMR:P26149 STRING:P26149
PhosphoSite:P26149 PaxDb:P26149 PRIDE:P26149
Ensembl:ENSMUST00000107021 Ensembl:ENSMUST00000107022
Ensembl:ENSMUST00000177651 GeneID:15493 KEGG:mmu:15493
GeneTree:ENSGT00550000074557 InParanoid:B1ARN7 OMA:HEEECHE
NextBio:288370 Bgee:P26149 Genevestigator:P26149
GermOnline:ENSMUSG00000063730 Uniprot:P26149
Length = 373
Score = 128 (50.1 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 42/135 (31%), Positives = 66/135 (48%)
Query: 90 GMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
G S LVTGA GF+G + L + D + + + + P +K L + V V+EG
Sbjct: 3 GWSCLVTGAGGFLGQRIIQLLVQEED-LEEIRVLDKVFRPETRKEFFNLETSIKVTVLEG 61
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
DI D + L + ++ V+H AA V + + + N+ G LLEAC A+
Sbjct: 62 DILDTQYLRRACQGISV--VIHTAAIIDVTGVIPR-QTILDVNLKGTQNLLEACIQASV- 117
Query: 210 PSIVWASSSSVYGLN 224
P+ +++SS V G N
Sbjct: 118 PAFIFSSSVDVAGPN 132
Score = 47 (21.6 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 14/62 (22%), Positives = 30/62 (48%)
Query: 346 TVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFV 405
TV L++ + R++ ++++ + G+ FT + AQ++ GY P + +K
Sbjct: 300 TVSFLLSPIYRYIP-PFNRHLVTLSGS---TFTFS-YKKAQRDLGYEPLVSWEEAKQKTS 354
Query: 406 RW 407
W
Sbjct: 355 EW 356
>TIGR_CMR|GSU_0626 [details] [associations]
symbol:GSU_0626 "GDP-mannose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0019673
KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
RefSeq:NP_951684.1 ProteinModelPortal:Q74FI2 SMR:Q74FI2
GeneID:2685242 KEGG:gsu:GSU0626 PATRIC:22024003 OMA:YACAKAY
ProtClustDB:CLSK827959 BioCyc:GSUL243231:GH27-625-MONOMER
Uniprot:Q74FI2
Length = 349
Score = 133 (51.9 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 64/240 (26%), Positives = 95/240 (39%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGL----DNFNN------YYDPSLKKARKALLNNHG 143
L+TG +G G++++ L +G V G+ +FN Y DP R
Sbjct: 5 LITGISGQDGSYLAELLLGKGYEVHGVIRRSSSFNTGRIDHLYRDPHEPDVR-------- 56
Query: 144 VFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEAC 203
+F+ GD+NDA + ++ V + +L AQ+ VR + P + G V LLE
Sbjct: 57 LFLHYGDLNDASSINRVLREVRPDEIYNLGAQSHVRVSFDVPEYTGEIDALGTVRLLEGI 116
Query: 204 KSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL- 262
+ ASSS +YG P E P S YA K I Y YG+
Sbjct: 117 RETGLNTRFYQASSSELYGKVVETPQKETTPF-YPRSPYACAKAYAYYITVNYRESYGMY 175
Query: 263 SITGLRFFTVYGPWGRPDMAYFSFTR---NILQGKPITVYRGKNHVDLARDFTYIDDIVK 319
+ G+ F P TR I G +Y G ++D RD+ + D V+
Sbjct: 176 ACNGI-LFNHESPRRGETFVTRKITRAAGRIKTGLQDRLYLG--NLDAKRDWGFAGDYVE 232
Score = 39 (18.8 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 355 ERHLKVKAKKNVIEMPGN----GDVPFTHANISSAQKEFGYRPTTDLQTGL 401
E+ + + K VIE+ +V + + A+++ G++P D Q GL
Sbjct: 280 EKGIDTNSGKIVIEIDPRYFRPAEVDLLLGDPAKARRQLGWQPRVDFQ-GL 329
>UNIPROTKB|E2QS16 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:80270 KO:K12408
OMA:PCGLRLV EMBL:AAEX03004381 RefSeq:XP_547037.1
Ensembl:ENSCAFT00000026560 GeneID:489917 KEGG:cfa:489917
NextBio:20863025 Uniprot:E2QS16
Length = 369
Score = 120 (47.3 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 52/192 (27%), Positives = 80/192 (41%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIND 153
LVTG GF+G HV L +R ++ L F+ + L++ + + V I+GD+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLLELRVFDLHLGAWLEELKTGPVQ---VTAIQGDVTQ 69
Query: 154 AKLLAKLFDAVAFTHVM-HLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
A +A AVA HV+ H A V + +P + N+ G ++EAC + +
Sbjct: 70 AHEVAA---AVAGAHVVIHTAGLVDV-FGRASPETIYEVNVQGTKNVIEACVQTGTR-FL 124
Query: 213 VWASSSSVYGLN----------ENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL 262
V+ SS V G N E+ P+ R P S A + E + L
Sbjct: 125 VYTSSMEVVGPNIKGHHFYRGNEDTPYEAVHRHPYPCSKAQAERLVLEANGRKVHGGLPL 184
Query: 263 SITGLRFFTVYG 274
LR +YG
Sbjct: 185 VTCALRPTGIYG 196
Score = 54 (24.1 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYYGYNR 416
FT N A++ FGY P + + +RW + G R
Sbjct: 331 FT-VNTDKARRHFGYEPLFSWEDSRTRTIRWVQAMEGSAR 369
>UNIPROTKB|Q3MHF2 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016853 "isomerase activity" evidence=IEA] [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
CTD:80270 KO:K12408 OMA:PCGLRLV OrthoDB:EOG4N5VX7 GO:GO:0016853
EMBL:DAAA02057919 EMBL:BC105259 EMBL:BT030700 IPI:IPI00692623
RefSeq:NP_001029868.1 UniGene:Bt.7734 STRING:Q3MHF2
Ensembl:ENSBTAT00000003028 GeneID:540229 KEGG:bta:540229
InParanoid:Q3MHF2 NextBio:20878503 Uniprot:Q3MHF2
Length = 368
Score = 125 (49.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 55/194 (28%), Positives = 84/194 (43%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIND 153
LVTG GF+G HV L +R + L F+ + P L++ + + V I+GD+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLRELRIFDLHLGPWLEELKTGPVQ---VTAIQGDVTQ 69
Query: 154 AKLLAKLFDAVAFTHVM-HLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
A +A AVA HV+ H A V + +P + N+ G ++EAC + +
Sbjct: 70 AHEVAA---AVAGAHVVIHTAGLVDV-FGKTSPETIHEVNVQGTQNVIEACVQTGTR-FL 124
Query: 213 VWASSSSVYGLN----------ENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL 262
++ SS V G N EN P+ R P S A + E A+ + GL
Sbjct: 125 IYTSSMEVVGPNIKGQPFYRGNENTPYEAVHRHPYPCSKALAEQLVLE--ANGREVLGGL 182
Query: 263 SIT--GLRFFTVYG 274
+ LR +YG
Sbjct: 183 PLVTCALRPTGIYG 196
Score = 48 (22.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYYG 413
FT + A++ FGY P + + +RW + G
Sbjct: 331 FT-VSTDKARRHFGYEPLFSWEESRTRTIRWVQTVEG 366
>TIGR_CMR|CPS_2156 [details] [associations]
symbol:CPS_2156 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:167879 "Colwellia
psychrerythraea 34H" [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=ISS] [GO:0006694 "steroid
biosynthetic process" evidence=ISS] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 HOGENOM:HOG000167989
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GO:GO:0016853 EMBL:CP000083 GenomeReviews:CP000083_GR OMA:KAYFLSN
RefSeq:YP_268881.1 ProteinModelPortal:Q482Y6 STRING:Q482Y6
GeneID:3521240 KEGG:cps:CPS_2156 PATRIC:21467431
ProtClustDB:CLSK906403 BioCyc:CPSY167879:GI48-2226-MONOMER
Uniprot:Q482Y6
Length = 400
Score = 118 (46.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 45/167 (26%), Positives = 76/167 (45%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
V VTGA GF+GT + L+ V G +Y P L + GV +++GDI
Sbjct: 47 VFVTGAGGFLGTAICRLLRLANIKVTGFAR--GHY-PELSQM--------GVNMVQGDIT 95
Query: 153 DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSA------ 206
D LL + + V H+AA+AGV + ++ Y N+ G +++AC+
Sbjct: 96 DFALLKETMHSCDL--VFHVAAKAGV-WGSKD--DYFKPNVQGAKNIIQACQELAITRLV 150
Query: 207 -NPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEI 252
PS+ +A G++E+ P++ D + Y +K E++
Sbjct: 151 YTSTPSVTFAGVDEA-GIDESQPYA-----DNFLNFYGESKALAEQL 191
Score = 56 (24.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 9/23 (39%), Positives = 17/23 (73%)
Query: 381 NISSAQKEFGYRPTTDLQTGLKK 403
+IS+A+K+ GY P ++ G+K+
Sbjct: 369 DISAAKKDLGYTPLISIEEGMKQ 391
>ZFIN|ZDB-GENE-081105-30 [details] [associations]
symbol:hsd3b1 "hydroxy-delta-5-steroid
dehydrogenase, 3 beta- and steroid delta-isomerase 1" species:7955
"Danio rerio" [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
ZFIN:ZDB-GENE-081105-30 eggNOG:COG0451 HOGENOM:HOG000167989
HOVERGEN:HBG000014 OrthoDB:EOG4K3KWG GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 OMA:DACVEAS EMBL:BC074074
IPI:IPI00809590 UniGene:Dr.32164 ProteinModelPortal:Q6GMH6
STRING:Q6GMH6 InParanoid:Q6GMH6 Bgee:Q6GMH6 Uniprot:Q6GMH6
Length = 402
Score = 124 (48.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 66/202 (32%), Positives = 86/202 (42%)
Query: 88 SGGMSVLVTGAAGFVGTH-VSLALKKRGDGVVGL-D-NFNNYYDPSLKKARKALLNNHGV 144
SG + V VTGA GF+G V L LK+ + L D N + SL R V
Sbjct: 32 SGEVCV-VTGACGFLGERLVRLLLKEEKLAEIRLLDRNIRSELIQSLDDCR----GETKV 86
Query: 145 FVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACK 204
V EGDI + +LL + A V H A+ V A++ Y N+ LLE C
Sbjct: 87 SVFEGDIRNPELLRRACKGAAL--VFHTASLIDVIGAVEYSELY-GVNVKATKLLLETCI 143
Query: 205 SANPQPSIVWASSSSVYGLNEN-VPFSEADRTDQPASL-----YAATKKAGEEIAHTYNH 258
N PS ++ SS V G N + P + D P S Y+ TKK EEI N
Sbjct: 144 QENV-PSFIYTSSIEVAGPNPSGEPIINGNE-DTPYSSRLKFSYSKTKKEAEEICLQANG 201
Query: 259 ---IYG--LSITGLRFFTVYGP 275
G L+ LR ++GP
Sbjct: 202 DLLCNGGQLATCALRPMYIFGP 223
Score = 49 (22.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 374 DVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLS 410
+ PF+ + A ++FGY P + + K W+ S
Sbjct: 355 NTPFSFS-YQKAHRDFGYTPRYEWEEARKCTTDWFAS 390
>DICTYBASE|DDB_G0284553 [details] [associations]
symbol:gmd "GDP-mannose dehydratase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;ISS] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0284553
GenomeReviews:CM000153_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AAFI02000066 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 RefSeq:XP_001134543.1 ProteinModelPortal:Q1ZXF7
SMR:Q1ZXF7 STRING:Q1ZXF7 EnsemblProtists:DDB0231676 GeneID:8624624
KEGG:ddi:DDB_G0284553 ProtClustDB:CLSZ2432853 Uniprot:Q1ZXF7
Length = 356
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 78/333 (23%), Positives = 135/333 (40%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGL-DNFNNYYDPSLKKAR---KALLNNHGVFVIEG 149
L+TG G G++++ L +G V G+ ++++ +K L + + G
Sbjct: 9 LITGITGQDGSYLTEFLISKGYYVHGIIQKIFHHFNTIVKNIYIKIDMLKEKESLTLHYG 68
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
D+ DA L + V T + +L AQ+ V+ + + G + LL+A +S +
Sbjct: 69 DLTDASNLHSIVSKVNPTEIYNLGAQSHVKVSFDMSEYTGDVDGLGCLRLLDAIRSCGME 128
Query: 210 PSIVW--ASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL-SITG 266
+ + AS+S +YG + +P SE P S YA K+ I Y Y + + G
Sbjct: 129 KKVKYYQASTSELYGKVQEIPQSETTPF-YPRSPYAVAKQYAYWIVVNYREAYDMYACNG 187
Query: 267 LRFFTVYGPWGRPDMAYFSFTR---NILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLG 323
+ F P P TR I G+ +Y G +++ RD+ + D V+
Sbjct: 188 I-LFNHESPRRGPTFVTRKITRFVAGIACGRDEILYLG--NINAKRDWGHARDYVEAMWL 244
Query: 324 SLDTSAGPAPYRIFNLGNTSPVT--VPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHAN 381
L P + + G T V V K ++ +K + + E G T
Sbjct: 245 MLQQEK-PEDF-VIATGETHSVREFVEKSFKEIDIIIKWRGEAEKEE----GYCEKTGKV 298
Query: 382 ISSAQKEFGYRPT-TDLQTG----LKKFVRWYL 409
+++ YRPT DL G KK ++W +
Sbjct: 299 YVKIDEKY-YRPTEVDLLLGNPNKAKKLLQWQI 330
>UNIPROTKB|C9JCB7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004
HGNC:HGNC:17729 IPI:IPI00916638 ProteinModelPortal:C9JCB7
SMR:C9JCB7 STRING:C9JCB7 PRIDE:C9JCB7 Ensembl:ENST00000416298
ArrayExpress:C9JCB7 Bgee:C9JCB7 Uniprot:C9JCB7
Length = 134
Score = 109 (43.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/139 (28%), Positives = 60/139 (43%)
Query: 182 MQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEA--DRTDQ-- 237
M NP + +N G + +L K + ++ AS+S VYG E P SE +
Sbjct: 1 MYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGDPEVHPQSEDYWGHVNPIG 58
Query: 238 PASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGP-WGRPDMAYFS-FTRNILQGKP 295
P + Y K+ E + + Y G+ + R F +GP D S F LQG+P
Sbjct: 59 PRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEP 118
Query: 296 ITVYRGKNHVDLARDFTYI 314
+TVY + R F Y+
Sbjct: 119 LTVYGSGSQT---RAFQYV 134
>ASPGD|ASPL0000035041 [details] [associations]
symbol:AN3119 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:BN001306 EMBL:AACD01000051 GO:GO:0044237 RefSeq:XP_660723.1
ProteinModelPortal:Q5B8L1 EnsemblFungi:CADANIAT00009957
GeneID:2873998 KEGG:ani:AN3119.2 HOGENOM:HOG000218208 OMA:WFASPRS
OrthoDB:EOG41NXW0 Uniprot:Q5B8L1
Length = 316
Score = 128 (50.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 61/212 (28%), Positives = 95/212 (44%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M +L+TGAAGF+G ++ L + L + N +P + K N + D
Sbjct: 1 MHILITGAAGFIGQLLARELLNDPSYTLVLTDIN---EPPIPAGVKYPQNAR---TVTAD 54
Query: 151 INDAK--LLAKLFDAV-AFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSAN 207
+ A ++ K DAV AF +M ++A M N+ LLEA ++
Sbjct: 55 LVKAADTVVDKSLDAVYAFHGIMSSGSEANFDLGMT-------VNVDATRKLLEALRATC 107
Query: 208 PQPSIVWASSSSVYGLNENVPFSEADRT-DQPASLYAATKKAGEEIAHTYNHIYGLSITG 266
P ++++SS +VYG + +P D P S Y A K E + + Y G ITG
Sbjct: 108 PGVRVIYSSSQAVYG--QPLPEVVDDTVIPTPQSSYGAEKLICETLVNEYTR-RGF-ITG 163
Query: 267 --LRFFTVYGPWGRPDMAYFSFTRNILQGKPI 296
LRF T+ GRP A SF +++ +P+
Sbjct: 164 FTLRFPTISVRPGRPTAAASSFLSGMIR-EPL 194
>WB|WBGene00022616 [details] [associations]
symbol:hsd-3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
EMBL:FO081547 RefSeq:NP_508852.3 ProteinModelPortal:A4UVJ7
EnsemblMetazoa:ZC449.6 GeneID:260026 KEGG:cel:CELE_ZC449.6
CTD:260026 WormBase:ZC449.6 HOGENOM:HOG000266975 InParanoid:A4UVJ7
OMA:IVVDPNP NextBio:952782 Uniprot:A4UVJ7
Length = 359
Score = 132 (51.5 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 52/194 (26%), Positives = 91/194 (46%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLN-NHGVFVIE-GDI 151
++TG GF+G H+ AL+K GD + DP+ + + + ++ + + E G
Sbjct: 8 VITGGGGFLGAHLIAALQKNGDRTKCI-----VVDPNPRLSHFSAIDFDKSLVEYEKGSF 62
Query: 152 NDAKLLAKLFDAVAFTHVMHLAAQAGVR-YAMQNPHSYVHS-NIAGLVTLLEACKSANPQ 209
D K+L ++ A T V HL A + Q YV++ N+ G L+E CK
Sbjct: 63 LDRKVLERVLPN-AIT-VFHLCAIGHTGWFGAQKHREYVYAFNVTGTKFLIEKCKFFGV- 119
Query: 210 PSIVWASSSSV-------YGLNENVPFS-EADRTDQPASLYAATKKAGEEIAHTYNHIYG 261
P +++SS +V Y +E+ P+ +++ D +Y+++K E + + I
Sbjct: 120 PRFIYSSSIAVVFVGKPIYNCDESEPYPLKSEYLD----IYSSSKAEAEAFVRSQSTIQ- 174
Query: 262 LSITGLRFFTVYGP 275
T LRF +YGP
Sbjct: 175 FKTTCLRFRAIYGP 188
Score = 37 (18.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 381 NISSAQKEFGYRPTTDL 397
+I A++E GY P +L
Sbjct: 334 SIEKARRELGYCPEQNL 350
>UNIPROTKB|Q9H2F3 [details] [associations]
symbol:HSD3B7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase
activity" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=NAS] [GO:0006699 "bile acid
biosynthetic process" evidence=TAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005789 "endoplasmic
reticulum membrane" evidence=TAS] [GO:0008206 "bile acid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] Reactome:REACT_111217 InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
EMBL:AF277719 EMBL:AK057436 EMBL:AK290950 EMBL:AK292068
EMBL:AC135048 EMBL:CH471192 EMBL:BC004929 IPI:IPI00065225
IPI:IPI00106783 RefSeq:NP_001136249.1 RefSeq:NP_001136250.1
RefSeq:NP_079469.2 UniGene:Hs.460618 ProteinModelPortal:Q9H2F3
SMR:Q9H2F3 IntAct:Q9H2F3 STRING:Q9H2F3 PhosphoSite:Q9H2F3
DMDM:47605550 PaxDb:Q9H2F3 PRIDE:Q9H2F3 DNASU:80270
Ensembl:ENST00000262520 Ensembl:ENST00000297679
Ensembl:ENST00000353250 GeneID:80270 KEGG:hsa:80270 UCSC:uc002eaf.2
CTD:80270 GeneCards:GC16P030997 H-InvDB:HIX0038797 HGNC:HGNC:18324
HPA:HPA050521 MIM:607764 MIM:607765 neXtProt:NX_Q9H2F3
Orphanet:79301 PharmGKB:PA134940289 InParanoid:Q9H2F3 KO:K12408
OMA:PCGLRLV OrthoDB:EOG4N5VX7 PhylomeDB:Q9H2F3 BindingDB:Q9H2F3
ChEMBL:CHEMBL3600 GenomeRNAi:80270 NextBio:70733
ArrayExpress:Q9H2F3 Bgee:Q9H2F3 CleanEx:HS_HSD3B7
Genevestigator:Q9H2F3 GermOnline:ENSG00000099377 GO:GO:0047016
GO:GO:0006699 GO:GO:0001558 Uniprot:Q9H2F3
Length = 369
Score = 126 (49.4 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 45/147 (30%), Positives = 69/147 (46%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIND 153
LVTG GF+G HV L +R + L F+ + P L++ + + V I+GD+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVR---VTAIQGDVTQ 69
Query: 154 AKLLAKLFDAVAFTHVM-HLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
A +A AVA HV+ H A V + +P + N+ G ++EAC + +
Sbjct: 70 AHEVAA---AVAGAHVVIHTAGLVDV-FGRASPKTIHEVNVQGTRNVIEACVQTGTR-FL 124
Query: 213 VWASSSSVYGLN-ENVPFSEADRTDQP 238
V+ SS V G N + PF + D P
Sbjct: 125 VYTSSMEVVGPNTKGHPFYRGNE-DTP 150
Score = 44 (20.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
FT + AQ+ FGY P + + + W
Sbjct: 331 FT-VSTDKAQRHFGYEPLFSWEDSRTRTILW 360
>UNIPROTKB|F6Z8R0 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:13616
"Monodelphis domestica" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
Ensembl:ENSMODT00000010461 Uniprot:F6Z8R0
Length = 347
Score = 127 (49.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 48/183 (26%), Positives = 85/183 (46%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGL----DNFNNYYDPSLKKARKALLNNHGVFVIEG 149
L+TG G G++++ L ++G V G+ +FN L K +A + + + + G
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGN-MKLHYG 85
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
D+ D+ L K+ + V T + +L AQ+ V+ + + G + LL+A K+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIKTCGLI 145
Query: 210 PSIVW--ASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL-SITG 266
S+ + AS+S +YG + +P E P S Y A K I + Y L ++ G
Sbjct: 146 NSVKFYQASTSELYGKVQEIPQKETTPF-YPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 204
Query: 267 LRF 269
+ F
Sbjct: 205 ILF 207
>UNIPROTKB|F1NP20 [details] [associations]
symbol:HSD3B2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 EMBL:AADN02037787 IPI:IPI00581332
Ensembl:ENSGALT00000030483 Uniprot:F1NP20
Length = 377
Score = 119 (46.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 44/167 (26%), Positives = 72/167 (43%)
Query: 90 GMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
G+S LVTGA GF+G + L + + + + + + + V ++EG
Sbjct: 5 GVSCLVTGAGGFLGQRIVRLLLEEDEALAEIRLLDKAFSREALWSFGKFQGKTEVKILEG 64
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
DI D + L + V+ V+H A+ ++ + N+ G LLEAC N Q
Sbjct: 65 DIRDVEFLHRACQGVSL--VIHTASIIDTLGLVEKQLLW-EVNVTGTQMLLEACAHCNVQ 121
Query: 210 PSIVWASSSSVYGLN-ENVPF--SEADRTDQPASL--YAATKKAGEE 251
++ S+ V G N P + D T + S YA +K+ EE
Sbjct: 122 -HFIYTSTIEVAGPNCRGDPIFNGDEDTTYESTSKFPYAQSKRLAEE 167
Score = 50 (22.7 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 374 DVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLS 410
+ PFT + AQK+FGY P + + +W S
Sbjct: 328 NTPFTFS-YRKAQKDFGYVPRYTWEEAKRYTSQWIAS 363
>UNIPROTKB|Q06963 [details] [associations]
symbol:hldD "ADP-L-glycero-D-manno-heptose-6-epimerase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008712 "ADP-glyceromanno-heptose 6-epimerase activity"
evidence=ISS] [GO:0009244 "lipopolysaccharide core region
biosynthetic process" evidence=ISS] UniPathway:UPA00356
HAMAP:MF_01601 InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0050661 GO:GO:0009244 EMBL:X59554 GO:GO:0097171 KO:K03274
OMA:AVNLWFW ProtClustDB:PRK11150 GO:GO:0008712
PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197 EMBL:X90547 EMBL:U47542
EMBL:AB012956 EMBL:AB012957 PIR:JC4066 PIR:T44311
RefSeq:NP_229897.1 ProteinModelPortal:Q06963 SMR:Q06963
DNASU:2614708 GeneID:2614708 KEGG:vch:VC0240 PATRIC:20079524
Uniprot:Q06963
Length = 314
Score = 126 (49.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 66/263 (25%), Positives = 112/263 (42%)
Query: 93 VLVTGAAGFVGTHVSLALKKRG-DGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDI 151
++VTG AG +G+++ AL +RG ++ +D+ N + K L++ ++ D
Sbjct: 2 IIVTGGAGMIGSNIIKALNERGITDILVVDHLKN------GRKFKNLVDLQIADYMDRDD 55
Query: 152 NDAKLLAK----LFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSAN 207
A+++A DA+ + +Y M N + Y LL C +
Sbjct: 56 FLAQIMAGDDFGFIDAIFHEGACSATTEWDGKYVMLNNYEYSKE-------LLHYC--LD 106
Query: 208 PQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTY-----NHIYGL 262
+ ++ASS++ YG E F E + + ++Y +K+ + H L
Sbjct: 107 REIPFLYASSAATYG--ETDTFIEEPQYEGALNVYGYSKQQFDNYVRRLWLDAKQHDETL 164
Query: 263 S-ITGLRFFTVYGP--WGRPDMAYFSFTRN--ILQGKPITVYRGKNHVDLARDFTYIDDI 317
S ITG R+F VYGP + MA +F N + G+ ++ G + RDF Y+ D+
Sbjct: 165 SQITGFRYFNVYGPREQHKGSMASVAFHLNNQMNAGENPKLFAGSEN--FKRDFVYVGDV 222
Query: 318 VKGCLGSLDTSAGPAPYRIFNLG 340
L LD IFN G
Sbjct: 223 AAVNLWFLDHGVSG----IFNCG 241
>TIGR_CMR|VC_0240 [details] [associations]
symbol:VC_0240 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 HAMAP:MF_01601 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 UniPathway:UPA00958
InterPro:IPR016040 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0050661 GO:GO:0009244 EMBL:X59554
GO:GO:0097171 KO:K03274 OMA:AVNLWFW ProtClustDB:PRK11150
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197 EMBL:X90547
EMBL:U47542 EMBL:AB012956 EMBL:AB012957 PIR:JC4066 PIR:T44311
RefSeq:NP_229897.1 ProteinModelPortal:Q06963 SMR:Q06963
DNASU:2614708 GeneID:2614708 KEGG:vch:VC0240 PATRIC:20079524
Uniprot:Q06963
Length = 314
Score = 126 (49.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 66/263 (25%), Positives = 112/263 (42%)
Query: 93 VLVTGAAGFVGTHVSLALKKRG-DGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDI 151
++VTG AG +G+++ AL +RG ++ +D+ N + K L++ ++ D
Sbjct: 2 IIVTGGAGMIGSNIIKALNERGITDILVVDHLKN------GRKFKNLVDLQIADYMDRDD 55
Query: 152 NDAKLLAK----LFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSAN 207
A+++A DA+ + +Y M N + Y LL C +
Sbjct: 56 FLAQIMAGDDFGFIDAIFHEGACSATTEWDGKYVMLNNYEYSKE-------LLHYC--LD 106
Query: 208 PQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTY-----NHIYGL 262
+ ++ASS++ YG E F E + + ++Y +K+ + H L
Sbjct: 107 REIPFLYASSAATYG--ETDTFIEEPQYEGALNVYGYSKQQFDNYVRRLWLDAKQHDETL 164
Query: 263 S-ITGLRFFTVYGP--WGRPDMAYFSFTRN--ILQGKPITVYRGKNHVDLARDFTYIDDI 317
S ITG R+F VYGP + MA +F N + G+ ++ G + RDF Y+ D+
Sbjct: 165 SQITGFRYFNVYGPREQHKGSMASVAFHLNNQMNAGENPKLFAGSEN--FKRDFVYVGDV 222
Query: 318 VKGCLGSLDTSAGPAPYRIFNLG 340
L LD IFN G
Sbjct: 223 AAVNLWFLDHGVSG----IFNCG 241
>UNIPROTKB|O60547 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IC]
[GO:0070401 "NADP+ binding" evidence=IDA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IGI;IDA] [GO:0019673
"GDP-mannose metabolic process" evidence=IGI;IDA] [GO:0007219
"Notch signaling pathway" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005737 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 EMBL:AL034344
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:IAYNLTD HOVERGEN:HBG000727 EMBL:AF042377
EMBL:CR541929 EMBL:CR541947 EMBL:AL033517 EMBL:AL035693
EMBL:AL137179 EMBL:AL158139 EMBL:BC000117 EMBL:AF040260
IPI:IPI00030207 RefSeq:NP_001240775.1 RefSeq:NP_001491.1
UniGene:Hs.144496 UniGene:Hs.660919 PDB:1T2A PDBsum:1T2A
ProteinModelPortal:O60547 SMR:O60547 IntAct:O60547 STRING:O60547
PhosphoSite:O60547 PaxDb:O60547 PeptideAtlas:O60547 PRIDE:O60547
DNASU:2762 Ensembl:ENST00000380815 GeneID:2762 KEGG:hsa:2762
UCSC:uc003mtq.3 CTD:2762 GeneCards:GC06M001624 HGNC:HGNC:4369
HPA:HPA031528 MIM:602884 neXtProt:NX_O60547 PharmGKB:PA28754
InParanoid:O60547 OrthoDB:EOG4FXR7M PhylomeDB:O60547 ChiTaRS:GMDS
EvolutionaryTrace:O60547 GenomeRNAi:2762 NextBio:10866
ArrayExpress:O60547 Bgee:O60547 CleanEx:HS_GMDS
Genevestigator:O60547 GermOnline:ENSG00000112699 Uniprot:O60547
Length = 372
Score = 127 (49.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 48/183 (26%), Positives = 85/183 (46%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGL----DNFNNYYDPSLKKARKALLNNHGVFVIEG 149
L+TG G G++++ L ++G V G+ +FN L K +A + + + + G
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGN-MKLHYG 85
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
D+ D+ L K+ + V T + +L AQ+ V+ + + G + LL+A K+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLI 145
Query: 210 PSIVW--ASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL-SITG 266
S+ + AS+S +YG + +P E P S Y A K I + Y L ++ G
Sbjct: 146 NSVKFYQASTSELYGKVQEIPQKETTPF-YPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 204
Query: 267 LRF 269
+ F
Sbjct: 205 ILF 207
>UNIPROTKB|F6W0W9 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase isoform 1"
species:9544 "Macaca mulatta" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:JU322217 EMBL:JV046790 RefSeq:NP_001253718.1
UniGene:Mmu.34300 Ensembl:ENSMMUT00000008111 GeneID:707051
KEGG:mcc:707051 NextBio:19971634 Uniprot:F6W0W9
Length = 372
Score = 127 (49.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 48/183 (26%), Positives = 85/183 (46%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGL----DNFNNYYDPSLKKARKALLNNHGVFVIEG 149
L+TG G G++++ L ++G V G+ +FN L K +A + + + + G
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGN-MKLHYG 85
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
D+ D+ L K+ + V T + +L AQ+ V+ + + G + LL+A K+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLI 145
Query: 210 PSIVW--ASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL-SITG 266
S+ + AS+S +YG + +P E P S Y A K I + Y L ++ G
Sbjct: 146 NSVKFYQASTSELYGKVQEIPQKETTPF-YPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 204
Query: 267 LRF 269
+ F
Sbjct: 205 ILF 207
>UNIPROTKB|F7EWI9 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD CTD:2762 EMBL:ACFV01112271 EMBL:ACFV01112272
EMBL:ACFV01112273 EMBL:ACFV01112274 EMBL:ACFV01112275
EMBL:ACFV01112276 EMBL:ACFV01112277 EMBL:ACFV01112278
EMBL:ACFV01112279 EMBL:ACFV01112280 EMBL:ACFV01112281
EMBL:ACFV01112282 EMBL:ACFV01112283 EMBL:ACFV01112284
EMBL:ACFV01112285 EMBL:ACFV01112286 EMBL:ACFV01112287
EMBL:ACFV01112288 EMBL:ACFV01112289 EMBL:ACFV01112290
EMBL:ACFV01112291 EMBL:ACFV01112292 EMBL:ACFV01112293
EMBL:ACFV01112294 EMBL:ACFV01112295 EMBL:ACFV01112296
EMBL:ACFV01112297 EMBL:ACFV01112298 EMBL:ACFV01112299
EMBL:ACFV01112300 EMBL:ACFV01112301 RefSeq:XP_002746325.1
ProteinModelPortal:F7EWI9 Ensembl:ENSCJAT00000038466
GeneID:100390839 Uniprot:F7EWI9
Length = 372
Score = 127 (49.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 48/183 (26%), Positives = 85/183 (46%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGL----DNFNNYYDPSLKKARKALLNNHGVFVIEG 149
L+TG G G++++ L ++G V G+ +FN L K +A + + + + G
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGN-MKLHYG 85
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
D+ D+ L K+ + V T + +L AQ+ V+ + + G + LL+A K+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLI 145
Query: 210 PSIVW--ASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL-SITG 266
S+ + AS+S +YG + +P E P S Y A K I + Y L ++ G
Sbjct: 146 NSVKFYQASTSELYGKVQEIPQKETTPF-YPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 204
Query: 267 LRF 269
+ F
Sbjct: 205 ILF 207
>RGD|67377 [details] [associations]
symbol:Hsd3b1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 1" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IDA]
[GO:0004769 "steroid delta-isomerase activity" evidence=IDA]
[GO:0005743 "mitochondrial inner membrane" evidence=ISO] [GO:0005758
"mitochondrial intermembrane space" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0006700
"C21-steroid hormone biosynthetic process" evidence=IDA] [GO:0006702
"androgen biosynthetic process" evidence=IDA] [GO:0010288 "response
to lead ion" evidence=IEP] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=TAS]
[GO:0021766 "hippocampus development" evidence=IEP] [GO:0030283
"testosterone dehydrogenase [NAD(P)] activity" evidence=TAS]
[GO:0031966 "mitochondrial membrane" evidence=IEA] [GO:0033327
"Leydig cell differentiation" evidence=IEP] [GO:0034698 "response to
gonadotropin stimulus" evidence=IEP] [GO:0034757 "negative
regulation of iron ion transport" evidence=IMP] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0051412 "response to
corticosterone stimulus" evidence=IEP] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:67377
GO:GO:0016021 GO:GO:0046686 GO:GO:0021766 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 GO:GO:0004769 GO:GO:0006702
Gene3D:3.40.50.720 OMA:MAGWSCL GO:GO:0005789 GO:GO:0031966
GO:GO:0033327 GO:GO:0051412 GO:GO:0010288
GeneTree:ENSGT00550000074557 EMBL:L17138 EMBL:BC089937
IPI:IPI00555268 PIR:A48769 RefSeq:NP_058961.4 RefSeq:XP_003749409.1
UniGene:Rn.109394 ProteinModelPortal:Q62878 STRING:Q62878
Ensembl:ENSRNOT00000026306 GeneID:100911154 GeneID:29632
KEGG:rno:100911154 KEGG:rno:29632 UCSC:RGD:67377 CTD:15497
InParanoid:Q62878 NextBio:609864 Genevestigator:Q62878
GermOnline:ENSRNOG00000019441 GO:GO:0030283 GO:GO:0006700
GO:GO:0034757 GO:GO:0034698 Uniprot:Q62878
Length = 373
Score = 123 (48.4 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 42/136 (30%), Positives = 65/136 (47%)
Query: 90 GMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
G S LVTGA GF+G + L + D + + + + P ++ L + V V+EG
Sbjct: 3 GWSCLVTGAGGFLGQRIVQLLVQEKD-LKEVRVLDKVFRPETREEFFNLGTSIKVTVLEG 61
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHS-NIAGLVTLLEACKSANP 208
DI D + L + ++ V+H AA V NP + N+ G LLEAC A+
Sbjct: 62 DILDTQCLRRACQGISV--VIHTAALIDVTGV--NPRQTILDVNLKGTQNLLEACVQASV 117
Query: 209 QPSIVWASSSSVYGLN 224
P+ ++ S+ V G N
Sbjct: 118 -PAFIYCSTVDVAGPN 132
Score = 45 (20.9 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
FT + AQ++ GY+P + +K W
Sbjct: 327 FTFS-YKKAQRDLGYKPLVSWEEAKQKTSEW 356
>UNIPROTKB|F1NA93 [details] [associations]
symbol:HSD3B2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:DACVEAS EMBL:AADN02037787
IPI:IPI00820848 Ensembl:ENSGALT00000023813 Uniprot:F1NA93
Length = 401
Score = 119 (46.9 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 44/167 (26%), Positives = 72/167 (43%)
Query: 90 GMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
G+S LVTGA GF+G + L + + + + + + + V ++EG
Sbjct: 31 GVSCLVTGAGGFLGQRIVRLLLEEDEALAEIRLLDKAFSREALWSFGKFQGKTEVKILEG 90
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
DI D + L + V+ V+H A+ ++ + N+ G LLEAC N Q
Sbjct: 91 DIRDVEFLHRACQGVSL--VIHTASIIDTLGLVEKQLLW-EVNVTGTQMLLEACAHCNVQ 147
Query: 210 PSIVWASSSSVYGLN-ENVPF--SEADRTDQPASL--YAATKKAGEE 251
++ S+ V G N P + D T + S YA +K+ EE
Sbjct: 148 -HFIYTSTIEVAGPNCRGDPIFNGDEDTTYESTSKFPYAQSKRLAEE 193
Score = 50 (22.7 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 374 DVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLS 410
+ PFT + AQK+FGY P + + +W S
Sbjct: 354 NTPFTFS-YRKAQKDFGYVPRYTWEEAKRYTSQWIAS 389
>MGI|MGI:96235 [details] [associations]
symbol:Hsd3b3 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 3" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96235 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 OrthoDB:EOG4K3KWG
GO:GO:0005743 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006694 OMA:WVFPRIA
GeneTree:ENSGT00550000074557 EMBL:M77015 IPI:IPI00111855
RefSeq:NP_001155214.1 RefSeq:NP_001155215.1 RefSeq:NP_001155216.1
RefSeq:NP_001155217.1 UniGene:Mm.158717 ProteinModelPortal:P26150
SMR:P26150 STRING:P26150 PaxDb:P26150 PRIDE:P26150
Ensembl:ENSMUST00000090743 Ensembl:ENSMUST00000107018
Ensembl:ENSMUST00000107019 GeneID:15494 KEGG:mmu:15494 CTD:15494
InParanoid:P26150 SABIO-RK:P26150 NextBio:288374 Bgee:P26150
Genevestigator:P26150 GermOnline:ENSMUSG00000062410 Uniprot:P26150
Length = 373
Score = 124 (48.7 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 41/135 (30%), Positives = 66/135 (48%)
Query: 90 GMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
G S LVTGA GF+G + L + D + + + + P ++ L + V V+EG
Sbjct: 3 GWSCLVTGAGGFLGQRIIQLLVQEKD-LEEIRVLDKVFKPETREQFFNLGTSIKVTVLEG 61
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
DI D + L + ++ V+H AA V + + + N+ G LLEAC A+
Sbjct: 62 DILDTQYLRRACQGISV--VIHTAAIIDVTGVIPR-QTILDVNLKGTQNLLEACIQASV- 117
Query: 210 PSIVWASSSSVYGLN 224
P+ +++SS V G N
Sbjct: 118 PAFIFSSSVDVAGPN 132
Score = 43 (20.2 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
FT + AQ++ GY P + +K W
Sbjct: 327 FTFS-YKKAQRDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|Q6P621 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
OrthoDB:EOG4FXR7M EMBL:AAMC01033108 EMBL:AAMC01033109
EMBL:AAMC01033110 EMBL:AAMC01033111 EMBL:AAMC01033112
EMBL:AAMC01033113 EMBL:AAMC01033114 EMBL:AAMC01033115
EMBL:AAMC01033116 EMBL:AAMC01033117 EMBL:AAMC01033118
EMBL:AAMC01033119 EMBL:AAMC01033120 EMBL:AAMC01033121
EMBL:AAMC01033122 EMBL:AAMC01033123 EMBL:AAMC01033124
EMBL:AAMC01033125 EMBL:AAMC01033126 EMBL:AAMC01033127
EMBL:AAMC01033128 EMBL:AAMC01033129 EMBL:AAMC01033130
EMBL:AAMC01033131 EMBL:AAMC01033132 EMBL:BC062513 UniGene:Str.7169
ProteinModelPortal:Q6P621 STRING:Q6P621 Ensembl:ENSXETT00000001321
Xenbase:XB-GENE-943015 InParanoid:Q6P621 Bgee:Q6P621 Uniprot:Q6P621
Length = 383
Score = 126 (49.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 60/244 (24%), Positives = 107/244 (43%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGL----DNFNNYYDPSLKKARKALLNNHGVFVIEG 149
L+TG G G++++ L ++G V G+ +FN L K A + + + + G
Sbjct: 38 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPHAHIEGN-MKLHYG 96
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
D+ D+ L K+ + V T + +L AQ+ V+ + + G + LL+A K+
Sbjct: 97 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGLGTLRLLDATKTCGLI 156
Query: 210 PSIVW--ASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL-SITG 266
S+ + AS+S +YG + +P E P S Y A K I + Y L ++ G
Sbjct: 157 NSVKFYQASTSELYGKVQEIPQKETTPF-YPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 215
Query: 267 LRFFTVYGPWGRPDMAYFSFTRNILQ---GKPITVYRGKNHVDLARDFTYIDDIVKGCLG 323
+ F P + +R++ + G+ V G ++D RD+ + D V+
Sbjct: 216 I-LFNHESPRRGANFVTRKISRSVAKIHLGQMEFVSLG--NLDAKRDWGHAKDYVEAMWL 272
Query: 324 SLDT 327
L T
Sbjct: 273 MLQT 276
>UNIPROTKB|C9JW33 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004 GO:GO:0048040
HGNC:HGNC:17729 IPI:IPI00916527 ProteinModelPortal:C9JW33
SMR:C9JW33 STRING:C9JW33 Ensembl:ENST00000457835
ArrayExpress:C9JW33 Bgee:C9JW33 Uniprot:C9JW33
Length = 190
Score = 118 (46.6 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 45/168 (26%), Positives = 75/168 (44%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
+L+TG AGFVG+H++ L G V +DNF K+ + + + +I D+
Sbjct: 34 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDV- 88
Query: 153 DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
+ L+ + + HLA+ A M NP + +N G + +L K + +
Sbjct: 89 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 140
Query: 213 VWASSSSVYGLNENVPFSEA--DRTDQ--PASLYAATKKAGEEIAHTY 256
+ AS+S VYG E P SE + P + Y K+ E + + Y
Sbjct: 141 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAY 188
>UNIPROTKB|H9L1L3 [details] [associations]
symbol:H9L1L3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AADN02078154 EMBL:AADN02078155 Ensembl:ENSGALT00000035571
GeneTree:ENSGT00560000077526 OMA:PACHKIS Uniprot:H9L1L3
Length = 109
Score = 104 (41.7 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 32/107 (29%), Positives = 51/107 (47%)
Query: 90 GMSVLVTGAAGFVGTH-VSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIE 148
G+ +VTG GF+G H V L L++ D + L F+ + DP L + + N V +
Sbjct: 9 GLVFVVTGGCGFLGRHLVRLLLEEEPD-LRELRVFDLHLDPDLPDGERPI--NPRVRALR 65
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAG 195
GD+ DA + + + V+H AA V + +P S N+ G
Sbjct: 66 GDVGDAGAVGRALEGADV--VLHTAALVDV-WGNADPQSIARVNVQG 109
>TAIR|locus:2056171 [details] [associations]
symbol:AT2G02400 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0009809 "lignin biosynthetic
process" evidence=ISS] [GO:0016621 "cinnamoyl-CoA reductase
activity" evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC005312 HOGENOM:HOG000167998 EMBL:BT005781
EMBL:BT006079 EMBL:AK228447 IPI:IPI00542037 PIR:C84436
RefSeq:NP_178345.1 UniGene:At.41493 UniGene:At.69541
ProteinModelPortal:Q9ZVQ2 SMR:Q9ZVQ2 STRING:Q9ZVQ2 PaxDb:Q9ZVQ2
PRIDE:Q9ZVQ2 DNASU:814771 EnsemblPlants:AT2G02400.1 GeneID:814771
KEGG:ath:AT2G02400 TAIR:At2g02400 InParanoid:Q9ZVQ2 OMA:NGFIGSW
PhylomeDB:Q9ZVQ2 ProtClustDB:CLSN2683687 ArrayExpress:Q9ZVQ2
Genevestigator:Q9ZVQ2 Uniprot:Q9ZVQ2
Length = 318
Score = 124 (48.7 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 56/238 (23%), Positives = 104/238 (43%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDI 151
+V VTGA GF+G+ + L ++G + + DP+ ++ + + E D+
Sbjct: 5 TVCVTGANGFIGSWIIRTLIEKGYTKIHASIYPGS-DPTHLLQLPG--SDSKIKIFEADL 61
Query: 152 NDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPS 211
D+ +++ D A V H+A+ + + V + G + +LEA K N +
Sbjct: 62 LDSDAISRAIDGCA--GVFHVASPCTLDPPVDPEKELVEPAVKGTINVLEAAKRFNVRRV 119
Query: 212 IVWASSSS-VYGLN--ENVPFSEADRTD-----QPASLYAATKKAGEEIAHTYNHIYGLS 263
++ +S S+ V N E VP E+ +D Y +K E+ A ++ +G +
Sbjct: 120 VITSSISALVPNPNWPEKVPVDESSWSDLDFCKSRQKWYPISKTLAEKAAWEFSEKHGTN 179
Query: 264 ITGLRFFTVYGPWGRPDM-AYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKG 320
I + T GP +P++ A + +LQG T + H L ++ D+ KG
Sbjct: 180 IVTIHPSTCLGPLLQPNLNASCAVLLQLLQGSTET----QEHHWLG--VVHVKDVAKG 231
>RGD|2838 [details] [associations]
symbol:Hsd3b5 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 5" species:10116 "Rattus norvegicus"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IDA] [GO:0005496 "steroid binding" evidence=IDA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA;IDA;TAS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016229 "steroid dehydrogenase activity"
evidence=TAS] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0042448 "progesterone metabolic process" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA]
[GO:0050810 "regulation of steroid biosynthetic process"
evidence=IDA] [GO:0051287 "NAD binding" evidence=IDA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 RGD:2838 GO:GO:0043231 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070
OrthoDB:EOG4K3KWG GO:GO:0003854 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0031966 GO:GO:0006694 GO:GO:0051287 GO:GO:0005496
GeneTree:ENSGT00550000074557 CTD:15496 EMBL:M67465 EMBL:BC092571
IPI:IPI00231782 PIR:A37404 RefSeq:NP_036716.1 RefSeq:XP_003749408.1
UniGene:Rn.34902 ProteinModelPortal:P27364 STRING:P27364
PhosphoSite:P27364 PRIDE:P27364 Ensembl:ENSRNOT00000026290
GeneID:100911116 GeneID:24470 KEGG:rno:100911116 KEGG:rno:24470
UCSC:RGD:2838 InParanoid:P27364 BindingDB:P27364 ChEMBL:CHEMBL4490
NextBio:603409 Genevestigator:P27364 GermOnline:ENSRNOG00000019417
GO:GO:0042448 GO:GO:0050810 Uniprot:P27364
Length = 373
Score = 123 (48.4 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 38/135 (28%), Positives = 65/135 (48%)
Query: 90 GMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
G S LVTGA GF+G + L + + + + + P K+ L V V+ G
Sbjct: 3 GWSCLVTGAGGFLGQRIVQMLVQEKE-LQEVRVLYRTFSPKHKEELSKLQTKAKVTVLRG 61
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
DI DA+ L + ++ ++H AA + + + + N+ G LL+AC A+
Sbjct: 62 DIVDAQFLRRACQGMSV--IIHTAAALDIAGFLPR-QTILDVNVKGTQLLLDACVEASV- 117
Query: 210 PSIVWASSSSVYGLN 224
P+ +++SS+ V G N
Sbjct: 118 PAFIYSSSTGVAGPN 132
Score = 43 (20.2 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
FT + AQ++ GY P + +K W
Sbjct: 327 FT-ISYKKAQRDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|Q60AF9 [details] [associations]
symbol:MCA0903 "Polysaccharide biosynthesis protein"
species:243233 "Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003869 Pfam:PF02719
InterPro:IPR016040 GO:GO:0009058 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AE017282 GenomeReviews:AE017282_GR HOGENOM:HOG000257078
RefSeq:YP_113388.1 ProteinModelPortal:Q60AF9 GeneID:3103120
KEGG:mca:MCA0903 PATRIC:22605604 OMA:PIFKKQI
ProtClustDB:CLSK2765708 Uniprot:Q60AF9
Length = 615
Score = 128 (50.1 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 57/252 (22%), Positives = 100/252 (39%)
Query: 90 GMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
G ++VTG G +G+ + + + G + + + ++ + + + + G
Sbjct: 283 GKCIMVTGGGGSIGSELCKQIARFSPGRLVVFEHCEFNLYRVELELRQAFPDMAIHAVLG 342
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
D+ DA + + D + H AA V Q V +N+ G T+ E
Sbjct: 343 DVTDAASVRRAIDVHKPAIIFHAAAYKHVPLLQQQVREAVFNNVIGTRTVAEVAVE---- 398
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYN-HIYGLSITGLR 268
YG+ E V S D+ P ++ ATK+A E + +YN H IT +R
Sbjct: 399 -----------YGVGEFVLIS-TDKAVNPTNVMGATKRAAELVVQSYNGHTATRFIT-VR 445
Query: 269 FFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTS 328
F V G G F + I G P+TV H ++ R F I + + + + T
Sbjct: 446 FGNVLGSAGS---VVPLFRKQIRNGGPVTV----THPEVTRFFMTIPEACQLIMKAAATG 498
Query: 329 AGPAPYRIFNLG 340
G + + ++G
Sbjct: 499 QGGEVF-VLDMG 509
>MGI|MGI:2141879 [details] [associations]
symbol:Hsd3b7 "hydroxy-delta-5-steroid dehydrogenase, 3
beta- and steroid delta-isomerase 7" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=ISO] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol
3-beta-dehydrogenase activity" evidence=ISO] [GO:0055114
"oxidation-reduction process" evidence=ISO] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 MGI:MGI:2141879
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989
HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0005789 GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:80270
KO:K12408 OMA:PCGLRLV OrthoDB:EOG4N5VX7 GO:GO:0047016 GO:GO:0001558
EMBL:AF277718 EMBL:BC132605 EMBL:BC138589 IPI:IPI00111009
RefSeq:NP_598704.2 UniGene:Mm.486340 ProteinModelPortal:Q9EQC1
SMR:Q9EQC1 STRING:Q9EQC1 PhosphoSite:Q9EQC1 PaxDb:Q9EQC1
PRIDE:Q9EQC1 Ensembl:ENSMUST00000046863 GeneID:101502
KEGG:mmu:101502 UCSC:uc009jwu.1 InParanoid:A2RTR5 ChiTaRS:HSD3B7
NextBio:354976 Bgee:Q9EQC1 Genevestigator:Q9EQC1
GermOnline:ENSMUSG00000042289 Uniprot:Q9EQC1
Length = 369
Score = 114 (45.2 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 58/228 (25%), Positives = 97/228 (42%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIND 153
LVTG GF+G H+ L +R + L F+ + L++ + + V I+GD+
Sbjct: 13 LVTGGCGFLGEHIVRMLLEREPRLRELRVFDLHLSSWLEELKAGPVQ---VTAIQGDVTQ 69
Query: 154 AKLLAKLFDAVAFTHVM-HLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
A +A A++ +HV+ H A V + +P + N+ G +++AC Q +
Sbjct: 70 AHEVAA---AMSGSHVVIHTAGLVDV-FGKASPKTIHKVNVQGTQNVIDACVQTGTQ-YL 124
Query: 213 VWASSSSVYGLN-ENVPFSEADRTDQPASL-----YAATKKAGEEIAHTYN--HIYG--- 261
V+ SS V G N + PF + D P Y +K E++ N + G
Sbjct: 125 VYTSSMEVVGPNIKGHPFYRGNE-DTPYEAVHSHPYPCSKALAEQLVLEANGRKVNGGLP 183
Query: 262 LSITGLRFFTVYGPWGRP--DMAY--FSFTRNILQGKPITVYRGKNHV 305
L LR +YG + D Y F + + P +V G+ +V
Sbjct: 184 LVTCALRPTGIYGEGHQVMRDFYYQGLRFGGRLFRAVPASVEHGRVYV 231
Score = 52 (23.4 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYYGYNR 416
FT + + AQ+ FGY+P + + ++W + G R
Sbjct: 331 FT-VSTNKAQRHFGYKPLFSWEESRTRTIQWVQAMEGSAR 369
>UNIPROTKB|Q8K3X3 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:10029
"Cricetulus griseus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
GO:GO:0019673 GO:GO:0042351 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AF525364 RefSeq:NP_001233625.1 ProteinModelPortal:Q8K3X3
SMR:Q8K3X3 GeneID:100689436 CTD:33716 HOVERGEN:HBG000727
Uniprot:Q8K3X3
Length = 372
Score = 127 (49.8 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 48/183 (26%), Positives = 85/183 (46%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGL----DNFNNYYDPSLKKARKALLNNHGVFVIEG 149
L+TG G G++++ L ++G V G+ +FN L K +A + + + + G
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGN-MKLHYG 85
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
D+ D+ L K+ + V T + +L AQ+ V+ + + G + LL+A K+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIKTCGLI 145
Query: 210 PSIVW--ASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL-SITG 266
S+ + AS+S +YG + +P E P S Y A K I + Y L ++ G
Sbjct: 146 NSVKFYQASTSELYGKVQEIPQKETTPF-YPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 204
Query: 267 LRF 269
+ F
Sbjct: 205 ILF 207
Score = 37 (18.1 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 7/33 (21%), Positives = 17/33 (51%)
Query: 374 DVPFTHANISSAQKEFGYRPTTDLQTGLKKFVR 406
+V F + S AQ++ ++P +++ V+
Sbjct: 328 EVDFLQGDCSKAQQKLNWKPRVAFDELVREMVQ 360
>MGI|MGI:1891112 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=ISO] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0070401 "NADP+ binding" evidence=ISO] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 MGI:MGI:1891112 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
HOVERGEN:HBG000727 CTD:2762 OrthoDB:EOG4FXR7M EMBL:AL645643
EMBL:AL645664 EMBL:AL645697 EMBL:AL645783 EMBL:AL645763
EMBL:BC031788 EMBL:BC093502 IPI:IPI00169546 RefSeq:NP_666153.1
UniGene:Mm.247143 ProteinModelPortal:Q8K0C9 SMR:Q8K0C9
STRING:Q8K0C9 PhosphoSite:Q8K0C9 PaxDb:Q8K0C9 PRIDE:Q8K0C9
Ensembl:ENSMUST00000041859 GeneID:218138 KEGG:mmu:218138
UCSC:uc007pzq.1 InParanoid:Q8K0C9 NextBio:376160 Bgee:Q8K0C9
CleanEx:MM_GMDS Genevestigator:Q8K0C9 GermOnline:ENSMUSG00000038372
Uniprot:Q8K0C9
Length = 372
Score = 127 (49.8 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 48/183 (26%), Positives = 85/183 (46%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGL----DNFNNYYDPSLKKARKALLNNHGVFVIEG 149
L+TG G G++++ L ++G V G+ +FN L K +A + + + + G
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGN-MKLHYG 85
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
D+ D+ L K+ + V T + +L AQ+ V+ + + G + LL+A K+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIKTCGLI 145
Query: 210 PSIVW--ASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL-SITG 266
S+ + AS+S +YG + +P E P S Y A K I + Y L ++ G
Sbjct: 146 NSVKFYQASTSELYGKVQEIPQKETTPF-YPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 204
Query: 267 LRF 269
+ F
Sbjct: 205 ILF 207
Score = 37 (18.1 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 7/33 (21%), Positives = 17/33 (51%)
Query: 374 DVPFTHANISSAQKEFGYRPTTDLQTGLKKFVR 406
+V F + S AQ++ ++P +++ V+
Sbjct: 328 EVDFLQGDCSKAQQKLNWKPRVAFDELVREMVQ 360
>RGD|1311008 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISO;ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISO;ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISO;ISS]
[GO:0070401 "NADP+ binding" evidence=ISO;ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 RGD:1311008
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
EMBL:CH473977 GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
CTD:2762 OrthoDB:EOG4FXR7M EMBL:BC104708 IPI:IPI00362967
RefSeq:NP_001034695.1 UniGene:Rn.212995 SMR:Q3MHS7 STRING:Q3MHS7
Ensembl:ENSRNOT00000023691 GeneID:291095 KEGG:rno:291095
UCSC:RGD:1311008 InParanoid:Q3MHS7 NextBio:632111
Genevestigator:Q3MHS7 Uniprot:Q3MHS7
Length = 372
Score = 127 (49.8 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 48/183 (26%), Positives = 85/183 (46%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGL----DNFNNYYDPSLKKARKALLNNHGVFVIEG 149
L+TG G G++++ L ++G V G+ +FN L K +A + + + + G
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGN-MKLHYG 85
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
D+ D+ L K+ + V T + +L AQ+ V+ + + G + LL+A K+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIKTCGLI 145
Query: 210 PSIVW--ASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL-SITG 266
S+ + AS+S +YG + +P E P S Y A K I + Y L ++ G
Sbjct: 146 NSVKFYQASTSELYGKVQEIPQKETTPF-YPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 204
Query: 267 LRF 269
+ F
Sbjct: 205 ILF 207
Score = 37 (18.1 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 7/33 (21%), Positives = 17/33 (51%)
Query: 374 DVPFTHANISSAQKEFGYRPTTDLQTGLKKFVR 406
+V F + S AQ++ ++P +++ V+
Sbjct: 328 EVDFLQGDCSKAQQKLNWKPRVAFDELVREMVQ 360
>UNIPROTKB|Q5IFP1 [details] [associations]
symbol:HSD3B "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:9615 "Canis lupus familiaris" [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0004769 "steroid
delta-isomerase activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070
OrthoDB:EOG4K3KWG GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0031966 GO:GO:0006694
CTD:3284 EMBL:AY739720 RefSeq:NP_001010954.1 UniGene:Cfa.13172
ProteinModelPortal:Q5IFP1 STRING:Q5IFP1 GeneID:483146
KEGG:cfa:483146 InParanoid:Q5IFP1 NextBio:20857590 Uniprot:Q5IFP1
Length = 373
Score = 119 (46.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 41/137 (29%), Positives = 65/137 (47%)
Query: 90 GMSVLVTGAAGFVGTHVS--LALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVI 147
G S LVTGA GF+G + LA +K + LD + P L + L + + ++
Sbjct: 3 GWSCLVTGAGGFLGQRIVHLLAEEKELQEIRALDKA---FRPELLEEFSKLQSKTKLTMV 59
Query: 148 EGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSAN 207
EGDI D + L + + V+H A+ V + + ++ N+ G LLEAC A+
Sbjct: 60 EGDILDEQCLKRACQGTSV--VIHTASVIDVMNVIHR-ETIMNVNLKGTQLLLEACAQAS 116
Query: 208 PQPSIVWASSSSVYGLN 224
P ++ S+ V G N
Sbjct: 117 V-PIFIYTSTIEVAGPN 132
Score = 45 (20.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
FT + AQ++ GY+P + +K W
Sbjct: 327 FTFS-YKKAQRDLGYKPLFSWEEAKQKTTEW 356
>UNIPROTKB|F1PED8 [details] [associations]
symbol:HSD3B2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
OMA:MAGWSCL GO:GO:0006694 GeneTree:ENSGT00550000074557
EMBL:AAEX03011027 Ensembl:ENSCAFT00000015969 Uniprot:F1PED8
Length = 377
Score = 119 (46.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 41/137 (29%), Positives = 65/137 (47%)
Query: 90 GMSVLVTGAAGFVGTHVS--LALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVI 147
G S LVTGA GF+G + LA +K + LD + P L + L + + ++
Sbjct: 7 GWSCLVTGAGGFLGQRIVHLLAEEKELQEIRALDKA---FRPELLEEFSKLQSKTKLTMV 63
Query: 148 EGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSAN 207
EGDI D + L + + V+H A+ V + + ++ N+ G LLEAC A+
Sbjct: 64 EGDILDEQCLKRACQGTSV--VIHTASVIDVMNVIHR-ETIMNVNLKGTQLLLEACAQAS 120
Query: 208 PQPSIVWASSSSVYGLN 224
P ++ S+ V G N
Sbjct: 121 V-PIFIYTSTIEVAGPN 136
Score = 45 (20.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
FT + AQ++ GY+P + +K W
Sbjct: 331 FTFS-YKKAQRDLGYKPLFSWEEAKQKTTEW 360
>UNIPROTKB|P96816 [details] [associations]
symbol:Rv0139 "Dihydroflavonol-4-reductase" species:83332
"Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005886
GO:GO:0005618 GO:GO:0003824 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
HOGENOM:HOG000168005 EMBL:CP003248 PIR:F70616 RefSeq:NP_214653.1
RefSeq:NP_334557.1 RefSeq:YP_006513458.1 SMR:P96816 DNASU:886860
EnsemblBacteria:EBMYCT00000002589 EnsemblBacteria:EBMYCT00000072636
GeneID:13316122 GeneID:886860 GeneID:923018 KEGG:mtc:MT0147
KEGG:mtu:Rv0139 KEGG:mtv:RVBD_0139 PATRIC:18122051
TubercuList:Rv0139 KO:K00091 OMA:QAENLVM ProtClustDB:CLSK790293
Uniprot:P96816
Length = 340
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 50/196 (25%), Positives = 85/196 (43%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIND 153
LV GA GF+G+HV+ L D P+ A +++ + GD+ D
Sbjct: 6 LVIGANGFLGSHVTRQLV--ADCAPQKGEVRAMVRPA---ANTRSIDDLPLTRFHGDVFD 60
Query: 154 AKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIV 213
+A +A+A ++ R +++P +N+AGL +L+ A+ + V
Sbjct: 61 TATVA---EAMAGCDDVYYCV-VDTRAWLRDPSPLFRTNVAGLRNVLDVATDASLR-RFV 115
Query: 214 WASSSSVYGLNENVPFSEADRTD-QPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTV 272
+ SS + G +E DR D + + Y ++ A E++ Y H GL + T
Sbjct: 116 FTSSYATVGRRRGHVATEEDRVDTRKVTPYVRSRVAAEDLVLQYAHDAGLPAVAMCVSTT 175
Query: 273 YG--PWGR-PDMAYFS 285
YG WGR P A+ +
Sbjct: 176 YGGGDWGRTPHGAFIA 191
>UNIPROTKB|Q4K6F9 [details] [associations]
symbol:rfbG "CDP-glucose-4,6-dehydratase" species:220664
"Pseudomonas protegens Pf-5" [GO:0009243 "O antigen biosynthetic
process" evidence=ISS] [GO:0047733 "CDP-glucose 4,6-dehydratase
activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0009243
RefSeq:YP_262174.1 ProteinModelPortal:Q4K6F9 SMR:Q4K6F9
STRING:Q4K6F9 GeneID:3479503 KEGG:pfl:PFL_5095 PATRIC:19879659
HOGENOM:HOG000167999 KO:K01709 OMA:KCYENKE ProtClustDB:CLSK715086
BioCyc:PFLU220664:GIX8-5136-MONOMER GO:GO:0047733
InterPro:IPR013445 PANTHER:PTHR10366:SF33 TIGRFAMs:TIGR02622
Uniprot:Q4K6F9
Length = 361
Score = 110 (43.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 58/221 (26%), Positives = 91/221 (41%)
Query: 90 GMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
G V +TG GF G+ ++L L+ G V G P+L + G+ G
Sbjct: 12 GKKVFLTGHTGFKGSWLALWLQSMGAQVQGFALMPPT-TPALFDVANVV---KGMQSCIG 67
Query: 150 DINDAKLLAKLFDAVAFTH--VMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSAN 207
DI D L A V F ++H+AAQ VR + + P +N+ G + +LEA +
Sbjct: 68 DIRD--LQAITHSMVGFNPDVLIHMAAQPLVRLSYREPLETYATNVMGTLHVLEAARLCP 125
Query: 208 PQPSIVWASSSSVYGLNENVPFSEADRTDQPAS---LYAATKKAGEEIAHTYNHIY---- 260
+IV ++ Y EN + R D+P Y+ +K E I +Y + +
Sbjct: 126 NLRAIVNVTTDKCY---ENREWEWGYREDEPMGGHDPYSNSKGCVELITASYRNSFFNTP 182
Query: 261 -GLSITGLRFFTVYG--PWGRPDMAYFSFTRNILQGKPITV 298
++ R V G W D R +G+P+TV
Sbjct: 183 QAAALASARAGNVIGGGDWAE-DRLIPDILRAFEKGQPVTV 222
Score = 54 (24.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 381 NISSAQKEFGYRPTTDLQTGLKKFVRWYLSY 411
+IS A+ + PT +L+ L + V+W+ ++
Sbjct: 305 DISKARARLNWAPTWNLEKTLSRIVQWHRAF 335
>UNIPROTKB|C9JFU6 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HGNC:HGNC:17729
IPI:IPI00916816 ProteinModelPortal:C9JFU6 SMR:C9JFU6 STRING:C9JFU6
Ensembl:ENST00000444193 ArrayExpress:C9JFU6 Bgee:C9JFU6
Uniprot:C9JFU6
Length = 121
Score = 100 (40.3 bits), Expect = 0.00016, P = 0.00016
Identities = 36/123 (29%), Positives = 54/123 (43%)
Query: 182 MQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEA--DRTDQ-- 237
M NP + +N G + +L K + ++ AS+S VYG E P SE +
Sbjct: 1 MYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGDPEVHPQSEDYWGHVNPIG 58
Query: 238 PASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGP-WGRPDMAYFS-FTRNILQGKP 295
P + Y K+ E + + Y G+ + R F +GP D S F LQG+P
Sbjct: 59 PRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEP 118
Query: 296 ITV 298
+TV
Sbjct: 119 LTV 121
>UNIPROTKB|F1NFM2 [details] [associations]
symbol:TDH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006567 "threonine catabolic process"
evidence=IEA] [GO:0008743 "L-threonine 3-dehydrogenase activity"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0006567 GeneTree:ENSGT00390000014037 OMA:DYAVEIF
GO:GO:0008743 EMBL:AADN02018298 IPI:IPI00599778
Ensembl:ENSGALT00000026878 Uniprot:F1NFM2
Length = 366
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 78/338 (23%), Positives = 133/338 (39%)
Query: 77 KHVRSSAQIH-----RSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSL 131
+ V S A H S VL+TG G +G ++ L+KR G NN +
Sbjct: 30 RQVASDASFHSVSFSESDHPRVLITGGLGQLGVGLAKLLRKR----FGK---NNVILSDI 82
Query: 132 KKARKALLNNHGVFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHS 191
+K + + G F+ DI D K L ++ T + H +A P +
Sbjct: 83 RKPADHVFYS-GPFIYL-DILDYKNLREIVVNNRITWLFHYSALLSAVGEANVPLARA-V 139
Query: 192 NIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEADRT-----DQPASLYAATK 246
NI GL +L+ N + + S+ +G P S D T +P ++Y +K
Sbjct: 140 NITGLHNVLDIAAEHNLRLFV--PSTIGAFG-----PTSPRDPTPDLCIQRPRTIYGVSK 192
Query: 247 KAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVD 306
E + Y++ YGL LR+ + +P + I + GK +
Sbjct: 193 VHAELMGEYYHYRYGLDFRCLRYPGIISADSQPGGGTTDYAVQIFHD---AIKTGKFECN 249
Query: 307 LARD----FTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERH---LK 359
L D YIDD +K L ++ A R +N+ S T +L +++H L+
Sbjct: 250 LKPDTRLPMMYIDDCLKATLEVMEAPAEALSMRTYNISAMS-FTPEELAQEVQKHVPELQ 308
Query: 360 VKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDL 397
V + + P + S+A++++G++ DL
Sbjct: 309 VTYNVDTVRQAIADSWPMNFDD-SNARRDWGWKHDYDL 345
>UNIPROTKB|B5XE59 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:8030
"Salmo salar" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
EMBL:BT049328 RefSeq:NP_001134845.1 UniGene:Ssa.6439
ProteinModelPortal:B5XE59 GeneID:100196344 Uniprot:B5XE59
Length = 370
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 46/184 (25%), Positives = 85/184 (46%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGL----DNFNNYYDPSLKKARKALLNNHGVFVIE- 148
++TG G G++++ L ++G V G+ +FN L + + + G +
Sbjct: 25 VITGITGQDGSYLAEFLLEKGYEVHGILRRSSSFNTGRIEHLYQNPQT--HTEGNMKLHY 82
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
GD+ D+ L K+ + V T + +L AQ+ V+ + + + + G + LL+A K+
Sbjct: 83 GDLTDSTCLVKIINQVKPTEIYNLGAQSHVKISFELAEYTANVDGVGTLRLLDAIKTCGL 142
Query: 209 QPSIVW--ASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL-SIT 265
S+ + AS+S +YG + +P E P S Y A K I + Y L ++
Sbjct: 143 TNSVKFYQASTSELYGKVQEIPQKETTPF-YPRSPYGAAKLYAYWIVVNFREAYNLFAVN 201
Query: 266 GLRF 269
G+ F
Sbjct: 202 GILF 205
>UNIPROTKB|C9JE50 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 GO:GO:0048040 HGNC:HGNC:17729
IPI:IPI00910001 ProteinModelPortal:C9JE50 SMR:C9JE50 STRING:C9JE50
PRIDE:C9JE50 Ensembl:ENST00000441952 ArrayExpress:C9JE50
Bgee:C9JE50 Uniprot:C9JE50
Length = 171
Score = 111 (44.1 bits), Expect = 0.00021, P = 0.00021
Identities = 36/123 (29%), Positives = 57/123 (46%)
Query: 212 IVWASSSSVYGLNENVPFSEA--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSITGL 267
++ AS+S VYG E P SE + P + Y K+ E + + Y G+ +
Sbjct: 41 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 100
Query: 268 RFFTVYGP-WGRPDMAYFS-FTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSL 325
R F +GP D S F LQG+P+TVY + R F Y+ D+V G + +
Sbjct: 101 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQT---RAFQYVSDLVNGLVALM 157
Query: 326 DTS 328
+++
Sbjct: 158 NSN 160
>ASPGD|ASPL0000052066 [details] [associations]
symbol:AN0746 species:162425 "Emericella nidulans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:BN001308
GO:GO:0050662 GO:GO:0044237 EMBL:AACD01000012 HOGENOM:HOG000218208
OrthoDB:EOG41NXW0 RefSeq:XP_658350.1 ProteinModelPortal:Q5BFD4
EnsemblFungi:CADANIAT00001918 GeneID:2876520 KEGG:ani:AN0746.2
OMA:INEYTRR Uniprot:Q5BFD4
Length = 321
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 71/299 (23%), Positives = 126/299 (42%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRG-DGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
MSVL+TGA G+VG ++ AL D V L + P+ A+ A I+
Sbjct: 1 MSVLITGAGGYVGQELASALLASSPDLTVTLADVVAPVIPA-SAAQHASRTK----CIQA 55
Query: 150 DINDAKLLAKLF------DAVAFTH-VMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEA 202
D+ K++ +LF D + H +M A+A M+ N +L+
Sbjct: 56 DLTSPKVVDELFTSSNRYDTIYLLHGIMSSGAEANFELGMR-------VNFDATRDILDR 108
Query: 203 CKSANPQPSIVWASSSSVYGLN-ENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYG 261
++ P +V+ SS +VYGL + E + P+S Y K E + + Y+
Sbjct: 109 LRAVQPGVKVVFTSSLAVYGLAPKGFVIDETNFPPVPSSSYGTQKLMIELLLNDYSRRGF 168
Query: 262 LSITGLRFFTVYGPWGRPDMAYFSFTRNILQ----G-KPITVYRGKNHVDLARDFTYIDD 316
+ +R TV G+P A SF I++ G K I + + +T + +
Sbjct: 169 IDGRAVRLPTVTVRAGKPTQAASSFASGIIREPFHGEKAILPVSKDTEMWICSPYTVVKN 228
Query: 317 IVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDV 375
++ + + G + R NL V+V ++++ LE + K K+ ++E + D+
Sbjct: 229 LIHAATVPAE-AFGDS--RSVNLPGLV-VSVQEMLDALEE-IGGKEKRALVEEKYDADI 282
>UNIPROTKB|Q8AVI1 [details] [associations]
symbol:gmds "Gmds-prov protein" species:8355 "Xenopus
laevis" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
HSSP:P32054 EMBL:BC042270 EMBL:BC111472 RefSeq:NP_001080352.1
UniGene:Xl.10260 SMR:Q8AVI1 GeneID:380044 KEGG:xla:380044
Xenbase:XB-GENE-943021 Uniprot:Q8AVI1
Length = 369
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 48/184 (26%), Positives = 83/184 (45%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGL----DNFNNYYDPSLKKARKALLNNHGVFVIE- 148
L+TG G G++++ L ++G V G+ +FN L K A + G +
Sbjct: 24 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPHA--HTEGNMKLHY 81
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
GD+ D+ L K+ + V T + +L AQ+ V+ + + G + LL+A K+
Sbjct: 82 GDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGLGTLRLLDATKTCGL 141
Query: 209 QPSIVW--ASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL-SIT 265
++ + AS+S +YG + +P E P S Y A K I + Y L ++
Sbjct: 142 INTVKFYQASTSELYGKVQEIPQKETTPF-YPRSPYGAAKLYAYWIVVNFREAYNLFAVN 200
Query: 266 GLRF 269
G+ F
Sbjct: 201 GILF 204
>WB|WBGene00022498 [details] [associations]
symbol:hsd-2 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
HOGENOM:HOG000266975 EMBL:FO081655 PIR:T30003 RefSeq:NP_508851.1
ProteinModelPortal:Q23086 SMR:Q23086 EnsemblMetazoa:ZC8.1
GeneID:191049 KEGG:cel:CELE_ZC8.1 CTD:191049 WormBase:ZC8.1
InParanoid:Q23086 OMA:FERANIT NextBio:947784 Uniprot:Q23086
Length = 374
Score = 117 (46.2 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 47/187 (25%), Positives = 82/187 (43%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIND 153
++ G GF+G HV AL+K +G DP ++ + ++ + I+ D
Sbjct: 5 VIVGGGGFLGAHVISALQK-----IGCKERIIVVDPCPQEFKTIKIDKSNISYIKASFLD 59
Query: 154 AKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHS-NIAGLVTLLEACKSANPQPSI 212
K+L + + + V+HLAA G + VH+ N+ G L++ CK+ +
Sbjct: 60 DKVLENILNGASA--VVHLAA-VGHTGLIAGDRKSVHNFNVNGTKQLIKQCKALGVK-RF 115
Query: 213 VWASSSSVYGLNENVP-FSEADRTDQPAS---LYAATKKAGEEIAHTYNHIYGLSITGLR 268
++ASS +V + E + +E D P Y+A+K E + + LR
Sbjct: 116 LYASSVAVSFIGEPLDNVTEDDPLPDPKKYLDFYSASKAEAETYVLSQS-TPDFKTVCLR 174
Query: 269 FFTVYGP 275
F +YGP
Sbjct: 175 FRGIYGP 181
Score = 44 (20.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 381 NISSAQKEFGYRPTTDLQTGLKKF 404
+I A++E GY P + T + K+
Sbjct: 313 SIERARRELGYEPEPCVMTDVAKY 336
>RGD|628727 [details] [associations]
symbol:Hsd3b7 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 7" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=IDA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0008206 "bile acid metabolic process"
evidence=TAS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016853 "isomerase activity" evidence=IEA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase
activity" evidence=IDA] InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 RGD:628727 GO:GO:0043231
GO:GO:0016021 eggNOG:COG0451 HOVERGEN:HBG000014 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006694
CTD:80270 KO:K12408 GO:GO:0047016 GO:GO:0001558 EMBL:AB000199
IPI:IPI00205271 RefSeq:NP_647545.1 UniGene:Rn.11380
ProteinModelPortal:O35048 STRING:O35048 PhosphoSite:O35048
PRIDE:O35048 GeneID:246211 KEGG:rno:246211 UCSC:RGD:628727
NextBio:623487 Genevestigator:O35048 GO:GO:0008206 Uniprot:O35048
Length = 338
Score = 110 (43.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 48/183 (26%), Positives = 79/183 (43%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIND 153
LVTG GF+G H+ L + + L F+ + L++ + + V I+GD+
Sbjct: 13 LVTGGCGFLGEHIVRMLLEWEPRLRELRVFDLHLSSWLEELKTGPVQ---VTAIQGDVTQ 69
Query: 154 AKLLAKLFDAVAFTHVM-HLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
A +A A+A +HV+ H A V + +P + N+ G +++AC + +
Sbjct: 70 AHEVAA---AMAGSHVVIHTAGLVDV-FGKASPETIHKVNVQGTQNVIDACVQTGTR-LL 124
Query: 213 VWASSSSVYGLN-ENVPFSEADRTDQPASL-----YAATKKAGEEIAHTYNHIYGLSITG 266
V+ SS V G N + PF + D P Y +K E++ N GL G
Sbjct: 125 VYTSSMEVVGPNVKGHPFYRGNE-DTPYEAIHRHPYPCSKALAEQLVLEANGRKGLRFGG 183
Query: 267 LRF 269
F
Sbjct: 184 RLF 186
Score = 50 (22.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYYG 413
FT + + AQ+ FGY+P + + + W + G
Sbjct: 300 FT-VSTNKAQRHFGYKPLFSWEESRARTIHWVQAMEG 335
>UNIPROTKB|O35048 [details] [associations]
symbol:Hsd3b7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:628727
GO:GO:0043231 GO:GO:0016021 eggNOG:COG0451 HOVERGEN:HBG000014
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0006694 CTD:80270 KO:K12408 GO:GO:0047016 GO:GO:0001558
EMBL:AB000199 IPI:IPI00205271 RefSeq:NP_647545.1 UniGene:Rn.11380
ProteinModelPortal:O35048 STRING:O35048 PhosphoSite:O35048
PRIDE:O35048 GeneID:246211 KEGG:rno:246211 UCSC:RGD:628727
NextBio:623487 Genevestigator:O35048 GO:GO:0008206 Uniprot:O35048
Length = 338
Score = 110 (43.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 48/183 (26%), Positives = 79/183 (43%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIND 153
LVTG GF+G H+ L + + L F+ + L++ + + V I+GD+
Sbjct: 13 LVTGGCGFLGEHIVRMLLEWEPRLRELRVFDLHLSSWLEELKTGPVQ---VTAIQGDVTQ 69
Query: 154 AKLLAKLFDAVAFTHVM-HLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
A +A A+A +HV+ H A V + +P + N+ G +++AC + +
Sbjct: 70 AHEVAA---AMAGSHVVIHTAGLVDV-FGKASPETIHKVNVQGTQNVIDACVQTGTR-LL 124
Query: 213 VWASSSSVYGLN-ENVPFSEADRTDQPASL-----YAATKKAGEEIAHTYNHIYGLSITG 266
V+ SS V G N + PF + D P Y +K E++ N GL G
Sbjct: 125 VYTSSMEVVGPNVKGHPFYRGNE-DTPYEAIHRHPYPCSKALAEQLVLEANGRKGLRFGG 183
Query: 267 LRF 269
F
Sbjct: 184 RLF 186
Score = 50 (22.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYYG 413
FT + + AQ+ FGY+P + + + W + G
Sbjct: 300 FT-VSTNKAQRHFGYKPLFSWEESRARTIHWVQAMEG 335
>UNIPROTKB|F1P299 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0007219 "Notch signaling
pathway" evidence=ISS] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
EMBL:AADN02036511 EMBL:AADN02036512 EMBL:AADN02036513
EMBL:AADN02036514 EMBL:AADN02036515 EMBL:AADN02036516
EMBL:AADN02036517 EMBL:AADN02036518 IPI:IPI00578850
Ensembl:ENSGALT00000020945 Uniprot:F1P299
Length = 358
Score = 119 (46.9 bits), Expect = 0.00028, P = 0.00028
Identities = 46/183 (25%), Positives = 84/183 (45%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGL----DNFNNYYDPSLKKARKALLNNHGVFVIEG 149
L+TG G G++++ L ++G V G+ +FN L K +A + + + + G
Sbjct: 13 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNSQAHIEGN-MKLHYG 71
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
D+ D+ L K+ + V + +L AQ+ V+ + + G + LL+A K+
Sbjct: 72 DLTDSTCLVKIINEVKPNEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIKTCGLI 131
Query: 210 PSIVW--ASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL-SITG 266
S+ + AS+S ++G + +P E P S Y A K I + Y L ++ G
Sbjct: 132 NSVKFYQASTSELFGKVQEIPQKETTPF-YPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 190
Query: 267 LRF 269
+ F
Sbjct: 191 ILF 193
>UNIPROTKB|Q48Q20 [details] [associations]
symbol:PSPPH_0194 "ActC family protein" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 EMBL:CP000058 GenomeReviews:CP000058_GR
RefSeq:YP_272499.1 ProteinModelPortal:Q48Q20 STRING:Q48Q20
GeneID:3558262 KEGG:psp:PSPPH_0194 PATRIC:19969384
HOGENOM:HOG000240104 OMA:CSNARAR ProtClustDB:CLSK869277
Uniprot:Q48Q20
Length = 282
Score = 117 (46.2 bits), Expect = 0.00028, P = 0.00028
Identities = 44/165 (26%), Positives = 77/165 (46%)
Query: 143 GVFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEA 202
GV + GD+ D + A L+ A A +V++ A + ++ Y + + GL +L
Sbjct: 42 GVHGVAGDLFDTRKPA-LWPAAALDYVVYCATPS-----KRDEAGYRMAYVEGLRNVLSW 95
Query: 203 CKSANPQPS-IVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYG 261
+ +P +++ SSS VYG +N + + D +PA+ E++A N G
Sbjct: 96 LEQTGQRPKRLIFVSSSGVYG-QQNGEWVDEDSITEPANYTGTVMLEAEQLA--LNS--G 150
Query: 262 LSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVD 306
L T +R +YGP GR D++ + ++ P VY + H D
Sbjct: 151 LPATAVRLTGIYGP-GRSDLSNRVRQGHSVRIDP-PVYANRIHAD 193
>ZFIN|ZDB-GENE-030828-2 [details] [associations]
symbol:hsd3b2 "hydroxy-delta-5-steroid dehydrogenase,
3 beta- and steroid delta-isomerase 2" species:7955 "Danio rerio"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;IMP] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
ZFIN:ZDB-GENE-030828-2 CTD:3283 HOVERGEN:HBG000014 KO:K00070
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AY279108 IPI:IPI00500056 RefSeq:NP_997962.1 UniGene:Dr.119436
ProteinModelPortal:Q7ZZC3 STRING:Q7ZZC3 GeneID:373131
KEGG:dre:373131 InParanoid:Q7ZZC3 NextBio:20813390
ArrayExpress:Q7ZZC3 Uniprot:Q7ZZC3
Length = 374
Score = 111 (44.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 61/202 (30%), Positives = 89/202 (44%)
Query: 88 SGGMSVLVTGAAGFVGTH-VSLALKKRGDGVVGL-D-NFNNYYDPSLKKARKALLNNHGV 144
SG + V VTGA GF+G V L L++ + L D N + +L+ R V
Sbjct: 4 SGEVCV-VTGACGFLGEKLVRLLLEEENLSEIRLLDRNIRSELIQTLEDGR----GETKV 58
Query: 145 FVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHS-NIAGLVTLLEAC 203
VIEGDI D +LL + T V H A+ A++ +S +H+ N+ LLE C
Sbjct: 59 SVIEGDIRDRELLRRACKGA--TLVFHTASLIDYNGAVE--YSELHAVNVKATRLLLETC 114
Query: 204 KSANPQPSIVWASSSSVYGLNEN-VPF----SEADRTDQPASLYAATKKAGEEIAHTYNH 258
+ S ++ SS V N + P + + P S Y+ TK+ E+I N
Sbjct: 115 IQQSVS-SFIYTSSIEVACPNRSGEPIINGHEDTPYSSYPISNYSKTKQEAEQICLQANG 173
Query: 259 IY----G-LSITGLRFFTVYGP 275
G L+ LR +YGP
Sbjct: 174 ELLRDGGHLATCALRPMFIYGP 195
Score = 49 (22.3 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 374 DVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLS 410
+ PF+ + A +EFGY P D + + W S
Sbjct: 327 NTPFSFS-YQKACREFGYSPRYDWEEARRSTTDWLAS 362
>UNIPROTKB|Q4KC82 [details] [associations]
symbol:arnA "Bifunctional polymyxin resistance protein
ArnA" species:220664 "Pseudomonas protegens Pf-5" [GO:0009245
"lipid A biosynthetic process" evidence=ISS] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=ISS] [GO:0016831 "carboxy-lyase activity" evidence=ISS]
[GO:0046398 "UDP-glucuronate metabolic process" evidence=ISS]
[GO:0046677 "response to antibiotic" evidence=ISS]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
SUPFAM:SSF50486 GO:GO:0016491 GO:GO:0046677 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0009245 GO:GO:0016742 GO:GO:0008168
Gene3D:3.10.25.10 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
RefSeq:YP_260151.1 ProteinModelPortal:Q4KC82 SMR:Q4KC82
STRING:Q4KC82 GeneID:3475938 KEGG:pfl:PFL_3045 PATRIC:19875401
BioCyc:PFLU220664:GIX8-3059-MONOMER GO:GO:0016831 GO:GO:0046398
Uniprot:Q4KC82
Length = 668
Score = 122 (48.0 bits), Expect = 0.00033, P = 0.00033
Identities = 85/336 (25%), Positives = 146/336 (43%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGD--GVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
VL+ G GF+G H+S L R D V GLD ++ ++++ R N H FV EGD
Sbjct: 321 VLILGVNGFIGNHLSERLL-RDDKYDVYGLDIGSD----AIERLRSHP-NFH--FV-EGD 371
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAG-VRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
I+ + + V+ L A A + Y +NP + + L+ C N +
Sbjct: 372 ISIHSEWIE-YHIKKCDVVLPLVAIATPIEYT-RNPLRVFELDFEENLKLVRYCVKYNKR 429
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQ---PAS----LYAATKKAGEEIAHTYNHIYGL 262
+++ S+S VYG+ ++ F E D ++ P + +Y+ +K+ + + Y GL
Sbjct: 430 --VIFPSTSEVYGMCQDKNFDE-DTSNLIVGPINKQRWIYSVSKQLLDRVIWAYG-AKGL 485
Query: 263 SITGLRFFTVYGP-WGRPDMAYFSFTR-------NILQGKPITVYRGKNHVDLARDFTYI 314
+ T R F GP R D A +R N+++G PI ++ G R FT I
Sbjct: 486 NFTLFRPFNWMGPRLDRLDSARIGSSRAITQLILNLVEGTPIRLFDGGEQ---KRCFTDI 542
Query: 315 DDIVKGCLGSLDTSAGPAPYRIFNLGNT-SPVTVPKLVNILERHLKVKAKK-NVIEMPGN 372
D ++ +D +I N+GN + ++ +L L R + + N G
Sbjct: 543 ADGIEALARIVDNENDCCNGQIINIGNPDNEASIRQLGEELLRQFEAHPLRGNFPPFAGF 602
Query: 373 GDVPFTHANISSAQKEFGYR-PTTDLQTGLKKFVRW 407
DV + A + ++ +R P+ D K+ + W
Sbjct: 603 RDVE-SKAFYGAGYQDVEHRKPSID---NAKRLLNW 634
>UNIPROTKB|B4E3U7 [details] [associations]
symbol:UXS1 "cDNA FLJ57788, highly similar to
UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC018878 GO:GO:0048040 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK304872 IPI:IPI00910001 SMR:B4E3U7 STRING:B4E3U7
Ensembl:ENST00000428048 UCSC:uc010ywh.2 Uniprot:B4E3U7
Length = 185
Score = 111 (44.1 bits), Expect = 0.00035, P = 0.00035
Identities = 36/123 (29%), Positives = 57/123 (46%)
Query: 212 IVWASSSSVYGLNENVPFSEA--DRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSITGL 267
++ AS+S VYG E P SE + P + Y K+ E + + Y G+ +
Sbjct: 41 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 100
Query: 268 RFFTVYGP-WGRPDMAYFS-FTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSL 325
R F +GP D S F LQG+P+TVY + R F Y+ D+V G + +
Sbjct: 101 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQT---RAFQYVSDLVNGLVALM 157
Query: 326 DTS 328
+++
Sbjct: 158 NSN 160
>UNIPROTKB|P14893 [details] [associations]
symbol:HSD3B "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:9913 "Bos taurus" [GO:0030868 "smooth
endoplasmic reticulum membrane" evidence=IDA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0004769 "steroid delta-isomerase
activity" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 GO:GO:0016021 CTD:3283 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
GO:GO:0030868 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 OMA:MAGWSCL GO:GO:0031966 GO:GO:0006694
GeneTree:ENSGT00550000074557 EMBL:X17614 EMBL:BC111203
IPI:IPI00703764 PIR:S07102 RefSeq:NP_776768.1 UniGene:Bt.111390
ProteinModelPortal:P14893 STRING:P14893 PRIDE:P14893
Ensembl:ENSBTAT00000010992 GeneID:281824 KEGG:bta:281824
InParanoid:P14893 NextBio:20805734 Uniprot:P14893
Length = 373
Score = 118 (46.6 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 44/167 (26%), Positives = 76/167 (45%)
Query: 90 GMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
G S LVTG GF+G + L + D + + + + P +++ L + + ++EG
Sbjct: 3 GWSCLVTGGGGFLGQRIICLLVEEKD-LQEIRVLDKVFRPEVREEFSKLQSKIKLTLLEG 61
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
DI D + L + V+H A+ VR A+ + ++ N+ G LLEAC A+
Sbjct: 62 DILDEQCLKGACQGTSV--VIHTASVIDVRNAVPR-ETIMNVNVKGTQLLLEACVQASV- 117
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQP-----ASLYAATKKAGEE 251
P + S+ V G N + R ++ +S Y +KK E+
Sbjct: 118 PVFIHTSTIEVAGPNSYREIIQDGREEEHHESAWSSPYPYSKKLAEK 164
Score = 40 (19.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
FT + AQ++ GY P + +K W
Sbjct: 327 FTFS-YKKAQRDLGYEPLYTWEEAKQKTKEW 356
>POMBASE|SPBC3F6.02c [details] [associations]
symbol:SPBC3F6.02c "3 beta-hydroxysteroid
dehydrogenase/delta 5-->4-isomerase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0000252 "C-3 sterol dehydrogenase
(C-4 sterol decarboxylase) activity" evidence=ISO] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006696 "ergosterol
biosynthetic process" evidence=ISO] [GO:0047012
"sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating)
activity" evidence=IEA] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 PomBase:SPBC3F6.02c GO:GO:0005783
GO:GO:0005794 eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0006696 PIR:T40392
RefSeq:NP_596741.1 ProteinModelPortal:O43050 STRING:O43050
PRIDE:O43050 EnsemblFungi:SPBC3F6.02c.1 GeneID:2540634
KEGG:spo:SPBC3F6.02c KO:K07748 OMA:PQVTRYR OrthoDB:EOG4DNJD4
NextBio:20801759 GO:GO:0000252 GO:GO:0047012 Uniprot:O43050
Length = 340
Score = 102 (41.0 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 63/260 (24%), Positives = 114/260 (43%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGD-GVVGLDNFNNYYDPSLKKARKALLNNHGVFVI-EG 149
SVLV G+ GF+G H+ L +R + + D F N K L HG F + G
Sbjct: 5 SVLVIGS-GFLGGHIIRQLCERENLRIAAFDLFEN---------EKLLHELHGQFTMYTG 54
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
D+ + ++F+ V+H A+ V ++ Y N+ G +++AC+ N
Sbjct: 55 DLTKQGDIERVFEEFHPRVVIHTASP--VHNLARD--IYFEVNVDGTANIIKACQKFNVD 110
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQP-ASLYAATKKAGE-EIAHTYNHIYGLSITGL 267
+ +S+ V+ + + E+ + Y +K E ++ + L L
Sbjct: 111 ALVYTSSAGVVFNGADLINVDESQPIPEVHMDAYNESKALAEKQVLEASSE--SLKTAAL 168
Query: 268 RFFTVYGPWGR---PDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGS 324
R ++GP R P M S +N G+ T ++ ++++L DFTYI++ L +
Sbjct: 169 RVAGLFGPGDRQLVPGM--LSVLKN---GQ--TKFQLGDNLNLF-DFTYIENAAYAHLLA 220
Query: 325 LDT--SAGP-APYRIFNLGN 341
+D S+ P A ++F + N
Sbjct: 221 MDNLLSSNPTANGQVFFITN 240
Score = 56 (24.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 381 NISSAQKEFGYRPTTDLQTGLKKFVRW 407
NI A+ Y P DL+ G+++ + W
Sbjct: 307 NIQKAEDVLKYHPIVDLEEGIRRTLAW 333
>RGD|1592771 [details] [associations]
symbol:Hsd3b "3 beta-hydroxysteroid
dehydrogenase/delta-5-delta-4 isomerase type II" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 RGD:1592771 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720
GO:GO:0005789 GO:GO:0031966 GO:GO:0006694 UniGene:Rn.128814
GermOnline:ENSRNOG00000019454 EMBL:M38179 EMBL:S63167
IPI:IPI00554001 PIR:A40378 PIR:B39051 RefSeq:NP_001036084.1
ProteinModelPortal:P22072 STRING:P22072 PhosphoSite:P22072
GeneID:682974 KEGG:rno:682974 UCSC:RGD:1592771 CTD:111785
InParanoid:P22072 BindingDB:P22072 ChEMBL:CHEMBL4821 NextBio:724140
ArrayExpress:P22072 Genevestigator:P22072 Uniprot:P22072
Length = 373
Score = 115 (45.5 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 42/137 (30%), Positives = 63/137 (45%)
Query: 90 GMSVLVTGAAGFVGTHV--SLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVI 147
G S LVTGA GFVG + L +K V LD + P K+ L V ++
Sbjct: 3 GWSCLVTGAGGFVGQRIIRMLVQEKELQEVRALDKV---FRPETKEEFSKLQTKAKVTML 59
Query: 148 EGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSAN 207
EGDI DA+ L + ++ V+H A+ + + + N+ G LLEA A+
Sbjct: 60 EGDILDAQYLRRACQGISV--VIHTASVMDFSRVLPR-QTILDVNLKGTQNLLEAGIHAS 116
Query: 208 PQPSIVWASSSSVYGLN 224
P+ ++ S+ V G N
Sbjct: 117 V-PAFIYCSTVDVAGPN 132
Score = 43 (20.2 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
FT + AQ++ GY P + +K W
Sbjct: 327 FTFS-YKKAQRDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|P22072 [details] [associations]
symbol:Hsd3b "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:1592771
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989
HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG GO:GO:0003854
GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0031966 GO:GO:0006694 UniGene:Rn.128814
GermOnline:ENSRNOG00000019454 EMBL:M38179 EMBL:S63167
IPI:IPI00554001 PIR:A40378 PIR:B39051 RefSeq:NP_001036084.1
ProteinModelPortal:P22072 STRING:P22072 PhosphoSite:P22072
GeneID:682974 KEGG:rno:682974 UCSC:RGD:1592771 CTD:111785
InParanoid:P22072 BindingDB:P22072 ChEMBL:CHEMBL4821 NextBio:724140
ArrayExpress:P22072 Genevestigator:P22072 Uniprot:P22072
Length = 373
Score = 115 (45.5 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 42/137 (30%), Positives = 63/137 (45%)
Query: 90 GMSVLVTGAAGFVGTHV--SLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVI 147
G S LVTGA GFVG + L +K V LD + P K+ L V ++
Sbjct: 3 GWSCLVTGAGGFVGQRIIRMLVQEKELQEVRALDKV---FRPETKEEFSKLQTKAKVTML 59
Query: 148 EGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSAN 207
EGDI DA+ L + ++ V+H A+ + + + N+ G LLEA A+
Sbjct: 60 EGDILDAQYLRRACQGISV--VIHTASVMDFSRVLPR-QTILDVNLKGTQNLLEAGIHAS 116
Query: 208 PQPSIVWASSSSVYGLN 224
P+ ++ S+ V G N
Sbjct: 117 V-PAFIYCSTVDVAGPN 132
Score = 43 (20.2 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 377 FTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
FT + AQ++ GY P + +K W
Sbjct: 327 FTFS-YKKAQRDLGYEPLVSWEEAKQKTSEW 356
>ZFIN|ZDB-GENE-040426-2379 [details] [associations]
symbol:tdh "L-threonine dehydrogenase"
species:7955 "Danio rerio" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 ZFIN:ZDB-GENE-040426-2379
GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 CTD:157739 GeneTree:ENSGT00390000014037
HOGENOM:HOG000034276 HOVERGEN:HBG062086 KO:K15789 OMA:DYAVEIF
OrthoDB:EOG4B2SXX EMBL:BX510941 EMBL:BC063962 IPI:IPI00488483
RefSeq:NP_998410.1 UniGene:Dr.10250 STRING:Q6P3J8
Ensembl:ENSDART00000025509 Ensembl:ENSDART00000147105 GeneID:406528
KEGG:dre:406528 InParanoid:Q6P3J8 NextBio:20818098 Uniprot:Q6P3J8
Length = 375
Score = 116 (45.9 bits), Expect = 0.00064, P = 0.00064
Identities = 73/329 (22%), Positives = 133/329 (40%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
VL+TG G +G ++ L+KR G NN ++K + ++ G F+ DI
Sbjct: 60 VLITGGLGQLGVGLAKLLRKR----FGK---NNVILSDIRKPPSNVFHS-GPFIYS-DIL 110
Query: 153 DAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSI 212
D K L ++ T ++H +A N NI GL +L+ +A +
Sbjct: 111 DYKNLREIVVNNRITWLVHYSALLSA-VGEANVALARAVNITGLHNILDI--AAEHGLRL 167
Query: 213 VWASSSSVYG-LNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 271
S+ +G + P + +P ++Y +K E + Y+H YGL LR+
Sbjct: 168 FVPSTIGAFGPTSPRNPTPDLC-VQRPRTIYGVSKVHAELMGEYYHHRYGLDFRCLRYPG 226
Query: 272 VYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARD----FTYIDDIVKGCLGSLDT 327
+ +P + I V GK +L D YIDD ++ L ++
Sbjct: 227 IISADSQPGGGTTDYAVQIFHD---AVKTGKFECNLKPDTRLPMMYIDDCLRATLEVMEA 283
Query: 328 SAGPAPYRIFNLGNTSPVTVPKLVNILERHL---KVKAKKNVIEMPGNGDVPFTHANISS 384
R +N+ N T +L N +++ L +V + + + P + ++
Sbjct: 284 PLETLSMRTYNI-NAMSFTPEELANEVQKQLPDLQVSYEIDSVRQAIADSWPMNFDD-TN 341
Query: 385 AQKEFGYRPTTDLQTGLKKFVRWYLSYYG 413
A+ ++G++ DL + V+ L+Y G
Sbjct: 342 ARNDWGWKHDYDLP----ELVQTMLNYIG 366
>UNIPROTKB|Q88BE7 [details] [associations]
symbol:PSPTO_0070 "Uncharacterized protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AE016853 GenomeReviews:AE016853_GR HOGENOM:HOG000240104
OMA:CSNARAR ProtClustDB:CLSK869277 RefSeq:NP_789929.1
ProteinModelPortal:Q88BE7 DNASU:1181678 GeneID:1181678
KEGG:pst:PSPTO_0070 PATRIC:19991286
BioCyc:PSYR223283:GJIX-70-MONOMER Uniprot:Q88BE7
Length = 282
Score = 113 (44.8 bits), Expect = 0.00080, P = 0.00080
Identities = 42/165 (25%), Positives = 76/165 (46%)
Query: 143 GVFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEA 202
GV +EGD+ +A+ A+ + A +V++ A + ++ Y + + GL +L
Sbjct: 42 GVIGVEGDLFEAQRPAQ-WPTAALDYVVYCATPS-----QRDETGYRMAYVEGLRNVLSW 95
Query: 203 CKSANPQPS-IVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYG 261
+ QP +++ SSS VYG +N + + + +P E++A N G
Sbjct: 96 LEQTGQQPKRLIFVSSSGVYG-QQNGEWVDENSATEPGGYTGTVMLEAEQLA--LNS--G 150
Query: 262 LSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVD 306
L T +R +YGP GR D++ + ++ P VY + H D
Sbjct: 151 LPATAVRLTGIYGP-GRSDLSNRVRQGHSVRVDP-PVYANRIHAD 193
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 421 421 0.00083 118 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 218
No. of states in DFA: 618 (66 KB)
Total size of DFA: 269 KB (2142 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.54u 0.10s 34.64t Elapsed: 00:00:02
Total cpu time: 34.58u 0.10s 34.68t Elapsed: 00:00:02
Start: Mon May 20 17:51:22 2013 End: Mon May 20 17:51:24 2013
WARNINGS ISSUED: 1