BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043169
(421 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M0B6|GAE1_ARATH UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1
SV=1
Length = 429
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/425 (85%), Positives = 394/425 (92%), Gaps = 13/425 (3%)
Query: 1 MPSLEEELFPSTPGKFKIERSNTMNRQFHRCFTSTSTMFLWALFLVALTASYLSFQSFVD 60
MPS+E+ELFPSTPGKFKI+RSN RQ HRCF STSTMFLWALFL+ALTASYLSFQSFVD
Sbjct: 1 MPSIEDELFPSTPGKFKIDRSN---RQLHRCFASTSTMFLWALFLIALTASYLSFQSFVD 57
Query: 61 SGSRYFSASWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGL 120
SGSRY +ASWGGIQWEK VR+SAQIHRSGG+SVLVTGA GFVG+HVSLAL+KRGDGVVGL
Sbjct: 58 SGSRYLTASWGGIQWEKQVRTSAQIHRSGGISVLVTGATGFVGSHVSLALRKRGDGVVGL 117
Query: 121 DNFNNYYDPSLKKARKALLNNHGVFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRY 180
DNFNNYYDPSLK+AR++LL++ G+FV+EGD+NDAKLLAKLFD VAFTHVMHLAAQAGVRY
Sbjct: 118 DNFNNYYDPSLKRARRSLLSSRGIFVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRY 177
Query: 181 AMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPAS 240
A++NP SYVHSNIAGLV LLE CK+ANPQP+IVWASSSSVYGLNE VPFSE+DRTDQPAS
Sbjct: 178 ALENPQSYVHSNIAGLVNLLEICKAANPQPAIVWASSSSVYGLNEKVPFSESDRTDQPAS 237
Query: 241 LYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYR 300
LYAATKKAGEEI HTYNHIYGL+ITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPIT+YR
Sbjct: 238 LYAATKKAGEEITHTYNHIYGLAITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITIYR 297
Query: 301 GKNHVDLARDFTYIDDIVKGCLGSLDTSA----------GPAPYRIFNLGNTSPVTVPKL 350
GKN VDLARDFTYIDDIVKGCLGSLD+S G APYRIFNLGNTSPVTVP L
Sbjct: 298 GKNRVDLARDFTYIDDIVKGCLGSLDSSGKSTGSGGKKRGAAPYRIFNLGNTSPVTVPIL 357
Query: 351 VNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLS 410
V+ILE+HLKVKAK+N +EMPGNGDVPFTHANISSA+ EFGY+PTTDL+TGLKKFVRWYLS
Sbjct: 358 VDILEKHLKVKAKRNFVEMPGNGDVPFTHANISSARNEFGYKPTTDLETGLKKFVRWYLS 417
Query: 411 YYGYN 415
YYGYN
Sbjct: 418 YYGYN 422
>sp|Q9LPC1|GAE2_ARATH UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana GN=GAE2 PE=2
SV=1
Length = 434
Score = 584 bits (1506), Expect = e-166, Method: Compositional matrix adjust.
Identities = 293/424 (69%), Positives = 333/424 (78%), Gaps = 14/424 (3%)
Query: 10 PSTPGKFKIERSNTMNRQFHRCFTSTSTMFLWALFLVAL--TASYLSFQSFVDSGSRYFS 67
PSTPGKFK+ + R +S + + W+L L Y S S DS R
Sbjct: 8 PSTPGKFKMMDKSPFFLHRTRWQSSVAKLAFWSLVFFGLLFIFFYRSPISNPDSSRRSLR 67
Query: 68 A-SWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNY 126
SWGG WEK VRSSA++ G+SVLVTGAAGFVGTHVS ALK+RGDGV+GLDNFN+Y
Sbjct: 68 TYSWGGPAWEKRVRSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDY 127
Query: 127 YDPSLKKARKALLNNHGVFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPH 186
YD SLK++R+ALL GVF++EGDIND LL KLF+ V FTHVMHLAAQAGVRYAM+NP
Sbjct: 128 YDTSLKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPG 187
Query: 187 SYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATK 246
SYVHSNIAG V LLE CKSANPQP+IVWASSSSVYGLN VPFSE DRTDQPASLYAATK
Sbjct: 188 SYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATK 247
Query: 247 KAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVD 306
KAGEEIAHTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FTR+IL+GK I+++ G NH
Sbjct: 248 KAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEGANHGT 307
Query: 307 LARDFTYIDDIVKGCLGSLDTSA----------GPAPYRIFNLGNTSPVTVPKLVNILER 356
+ARDFTYIDDIVKGCLG+LDT+ G A R+FNLGNTSPV V LV+ILER
Sbjct: 308 VARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVSILER 367
Query: 357 HLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYYGYNR 416
LKVKAK+N++++P NGDVPFTHANISSAQ+EFGY+P+TDLQTGLKKFVRWYL YY
Sbjct: 368 LLKVKAKRNMMKLPRNGDVPFTHANISSAQREFGYKPSTDLQTGLKKFVRWYLGYYKQG- 426
Query: 417 GKRV 420
GK+V
Sbjct: 427 GKKV 430
>sp|O81312|GAE3_ARATH UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana GN=GAE3 PE=2
SV=1
Length = 430
Score = 580 bits (1496), Expect = e-165, Method: Compositional matrix adjust.
Identities = 296/428 (69%), Positives = 332/428 (77%), Gaps = 29/428 (6%)
Query: 10 PSTPGKFKIERSNTMNRQFHRCF--TSTSTMFLWALFLVALTASYLSFQSFV-----DSG 62
PSTPGKFK FHR +S + + W+L V L + ++S V D
Sbjct: 11 PSTPGKFK--------PYFHRTRWQSSVAKLAFWSLVFVGLIFIFF-YRSPVSSNPADPS 61
Query: 63 SRYFSA-SWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLD 121
R SWGG WEK VRSSA++ G SVLVTGAAGFVGTHVS ALK+RGDGV+GLD
Sbjct: 62 RRSLRTYSWGGPAWEKRVRSSARLRTRRGFSVLVTGAAGFVGTHVSAALKRRGDGVLGLD 121
Query: 122 NFNNYYDPSLKKARKALLNNHGVFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYA 181
NFN+YYDPSLK+AR+ALL GVFV+EGDINDA LL KLF+ V FTHVMHLAAQAGVRYA
Sbjct: 122 NFNDYYDPSLKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFTHVMHLAAQAGVRYA 181
Query: 182 MQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASL 241
M+NP SYVHSNIAG V LLE CKSANPQP+IVWASSSSVYGLN VPFSE DRTDQPASL
Sbjct: 182 MENPSSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASL 241
Query: 242 YAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRG 301
YAATKKAGEEIAHTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FTR+IL+GK I+++ G
Sbjct: 242 YAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEG 301
Query: 302 KNHVDLARDFTYIDDIVKGCLGSLDTSA----------GPAPYRIFNLGNTSPVTVPKLV 351
NH +ARDFTYIDDIVKGCLG+LDT+ G A R+FNLGNTSPV V LV
Sbjct: 302 VNHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLV 361
Query: 352 NILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSY 411
ILER LKVKAK+N++++P NGDV FTHANISSAQ+E GY+PTTDLQTGLKKF RWYL Y
Sbjct: 362 TILERLLKVKAKRNIMKLPRNGDVQFTHANISSAQRELGYKPTTDLQTGLKKFARWYLGY 421
Query: 412 YGYNRGKR 419
YN GK+
Sbjct: 422 --YNGGKK 427
>sp|O22141|GAE4_ARATH UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1
SV=1
Length = 437
Score = 572 bits (1474), Expect = e-162, Method: Compositional matrix adjust.
Identities = 286/422 (67%), Positives = 331/422 (78%), Gaps = 18/422 (4%)
Query: 9 FPSTPGKFKIERSNTMNR-QFHRCFT-----STSTMFLWALFLVALTASYLSFQSFVDSG 62
PS+PGKFK+E+S+ ++R +F T S + L +L + S S
Sbjct: 7 IPSSPGKFKMEKSSYLHRLRFQSSLTKFAFFSFFLLCLISLLFLRSPPSINPSSPSDPSR 66
Query: 63 SRYFSASWGGIQWEKHVRSSAQIHRS--GGMSVLVTGAAGFVGTHVSLALKKRGDGVVGL 120
+ ++GG WEK +RSSA+I S G++VLVTGAAGFVGTHVS ALK+RGDGV+GL
Sbjct: 67 RSLRTNTYGGPAWEKRLRSSARIRTSTNNGITVLVTGAAGFVGTHVSAALKRRGDGVIGL 126
Query: 121 DNFNNYYDPSLKKARKALLNNHGVFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRY 180
DNFN+YYDPSLK+AR+ALL G+F++EGDIND +LL KLF V+FTHVMHLAAQAGVRY
Sbjct: 127 DNFNDYYDPSLKRARRALLERSGIFIVEGDINDVELLRKLFKIVSFTHVMHLAAQAGVRY 186
Query: 181 AMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPAS 240
AM+NP SYVHSNIAG V LLE CKS NPQP+IVWASSSSVYGLN VPFSE D+TDQPAS
Sbjct: 187 AMENPSSYVHSNIAGFVNLLEICKSVNPQPAIVWASSSSVYGLNTKVPFSEKDKTDQPAS 246
Query: 241 LYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYR 300
LYAATKKAGEEIAHTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FT++IL+GK I+++
Sbjct: 247 LYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKSISIFE 306
Query: 301 GKNHVDLARDFTYIDDIVKGCLGSLDTSA----------GPAPYRIFNLGNTSPVTVPKL 350
NH +ARDFTYIDDIVKGCL +LDT+ GPA R+FNLGNTSPV V L
Sbjct: 307 SANHGTVARDFTYIDDIVKGCLAALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVSDL 366
Query: 351 VNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLS 410
V ILER LKVKAKKN+I+MP NGDVPFTHANIS AQ+E GY+PTTDLQTGLKKFVRWYLS
Sbjct: 367 VRILERQLKVKAKKNLIKMPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLS 426
Query: 411 YY 412
YY
Sbjct: 427 YY 428
>sp|Q9STI6|GAE5_ARATH UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thaliana GN=GAE5 PE=2
SV=1
Length = 436
Score = 526 bits (1355), Expect = e-148, Method: Compositional matrix adjust.
Identities = 278/428 (64%), Positives = 325/428 (75%), Gaps = 19/428 (4%)
Query: 9 FPSTPGKFKIERSNTMNRQFHRCFTSTSTMFLWALFLVALTASYL--------SFQSFVD 60
PSTPGK+K ++ H + S + LWA +AL YL S ++ D
Sbjct: 7 LPSTPGKYKTDKVPPYGILHHHRYLRLSKLTLWASLFLALFLFYLVLSPPPSPSRRNLND 66
Query: 61 SGSRYFSASWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGL 120
S S +A +GG WEK VR SA+ GG++VLVTGA+GFVGTHVS+AL++RGDGV+GL
Sbjct: 67 SSS-ISAAKYGGSHWEKQVRKSARPRSHGGLTVLVTGASGFVGTHVSIALRRRGDGVLGL 125
Query: 121 DNFNNYYDPSLKKARKALLNNHGVFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRY 180
DNFN YYDP LK+AR+ LL GVFV+EGDINDA LL KLFD V FTHVMHLAAQAGVRY
Sbjct: 126 DNFNRYYDPKLKRARQGLLERSGVFVVEGDINDAVLLRKLFDVVLFTHVMHLAAQAGVRY 185
Query: 181 AMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPAS 240
AMQNP SYV+SNIAG V LLE KSANPQP+IVWASSSSVYGLN VPFSE DRTDQPAS
Sbjct: 186 AMQNPGSYVNSNIAGFVNLLEVSKSANPQPAIVWASSSSVYGLNSKVPFSEKDRTDQPAS 245
Query: 241 LYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYR 300
LYAATKKAGE IAHTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FT++IL+GK ITV+
Sbjct: 246 LYAATKKAGEGIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKTITVFE 305
Query: 301 GKNHVDLARDFTYIDDIVKGCLGSLDTSA----------GPAPYRIFNLGNTSPVTVPKL 350
+ +ARDFTYIDDIVKGCLG+LDT+ GPA +RI+NLGNTSPV V KL
Sbjct: 306 SPDKGSVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKKGPAMFRIYNLGNTSPVPVTKL 365
Query: 351 VNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLS 410
V ILE+ LK+KAKK ++ +P NGDV FTHANI+ AQ E GY+P DL+TGLKKFV+WY+
Sbjct: 366 VTILEKLLKMKAKKKIMPLPRNGDVEFTHANITLAQAELGYKPAVDLETGLKKFVKWYMG 425
Query: 411 YYGYNRGK 418
+Y ++ K
Sbjct: 426 FYTGSKKK 433
>sp|Q9LIS3|GAE6_ARATH UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1
SV=1
Length = 460
Score = 523 bits (1348), Expect = e-148, Method: Compositional matrix adjust.
Identities = 265/436 (60%), Positives = 322/436 (73%), Gaps = 34/436 (7%)
Query: 12 TPGKFKIERSNTMNRQFH--RCFTSTSTMFLWA----------LFLV---------ALTA 50
T K+ER N+ R+ H + ++S + A +F + A A
Sbjct: 9 TSKTVKLERYNSYLRKIHSTKVLNASSKVLFRATLLVALVLVLIFAINYPPLSDSRAAAA 68
Query: 51 SYLSFQSFVDSG---SRYFSASWGGIQWEKHVRSSAQIHRSGGMSVLVTGAAGFVGTHVS 107
+L +SF+ +G S S+S GG WEK VR S+ R G+SVLVTGAAGFVG+H S
Sbjct: 69 HHLHRRSFLSTGLFSSSSSSSSIGGAAWEKRVRQSSTAKRPHGLSVLVTGAAGFVGSHCS 128
Query: 108 LALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDINDAKLLAKLFDAVAFT 167
LAL+KRGDGV+G DNFN+YYDPSLK+AR+ LL VF++EGD+ND LL KLFD V FT
Sbjct: 129 LALRKRGDGVLGFDNFNDYYDPSLKRARQELLEKQQVFIVEGDLNDGPLLRKLFDVVPFT 188
Query: 168 HVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENV 227
H++HLAAQAGVRYAM+NP SY+ SNIAG V LLE K+ANPQP+IVWASSSSVYGLN
Sbjct: 189 HILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQPAIVWASSSSVYGLNTEN 248
Query: 228 PFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFT 287
PFSE RTDQPASLYAATKKAGEEIAHTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FT
Sbjct: 249 PFSEEHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFT 308
Query: 288 RNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTSA----------GPAPYRIF 337
++IL GK I +YR +++ ++ARDFTYIDDIVKGC+G+LDT+ G A R++
Sbjct: 309 KDILHGKSIDIYRTQDNQEVARDFTYIDDIVKGCVGALDTAEKSTGSGGKKRGQAQLRVY 368
Query: 338 NLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDL 397
NLGNTSPV V +LV+ILE L KAKK++I+MP NGDVP+THAN+S A K+FGY+PTTDL
Sbjct: 369 NLGNTSPVPVGRLVSILEGLLGTKAKKHLIKMPRNGDVPYTHANVSLAYKDFGYKPTTDL 428
Query: 398 QTGLKKFVRWYLSYYG 413
GL+KFV+WY+ YYG
Sbjct: 429 AAGLRKFVKWYVGYYG 444
>sp|Q04871|YCL2_ECO11 Uncharacterized 37.6 kDa protein in cld 5'region OS=Escherichia
coli O111:H- PE=3 SV=1
Length = 334
Score = 295 bits (754), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 157/337 (46%), Positives = 210/337 (62%), Gaps = 20/337 (5%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M LVTGAAGF+G HVS L + G VVG+DN N+YYD SLK+AR LL G + D
Sbjct: 1 MKYLVTGAAGFIGFHVSKRLLEAGHQVVGIDNLNDYYDVSLKQARLELLAQPGFQFHKID 60
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
+ D + + LF + F V + VRY+++NPH+Y SN+ G + +LE C+ Q
Sbjct: 61 LADREGMTDLFASGHFERVFISPHRLAVRYSLENPHAYADSNLTGFLNILEGCRHNKIQ- 119
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFF 270
+++ASSSSVYGLN +PFS D D P SLYAATKKA E +AHTY+H+YGL TGLRFF
Sbjct: 120 HLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMAHTYSHLYGLPATGLRFF 179
Query: 271 TVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDT--- 327
TVYGPWGRPDMA F FT+ +L+GK I VY N+ + RDFTYIDDI + + D
Sbjct: 180 TVYGPWGRPDMALFKFTKAMLEGKSIDVY---NYGKMKRDFTYIDDIAEAIIRLQDVIPH 236
Query: 328 ------------SAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDV 375
+A APYR++N+GN+SPV + + LE L ++AKKN++ + GDV
Sbjct: 237 ADTQWTVETGTPAASIAPYRVYNIGNSSPVELMDYIQALEDALGIEAKKNMLPLQP-GDV 295
Query: 376 PFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYY 412
T A+ + + G+ P T ++ G+K FV WY +Y
Sbjct: 296 LETSADTKALYEVIGFTPETTVKDGVKNFVNWYRDFY 332
>sp|P39858|CAPI_STAAU Protein CapI OS=Staphylococcus aureus GN=capI PE=3 SV=1
Length = 334
Score = 291 bits (745), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 149/337 (44%), Positives = 215/337 (63%), Gaps = 20/337 (5%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M +L+TG AGF+G+H++ L K+G V+G+D+ N+YY SLK+ R + +
Sbjct: 1 MKILITGTAGFIGSHLAKKLIKQGHYVIGVDSINDYYSVSLKEDRLKSIGKENFTFNKVK 60
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
+ + L+K+F V++LAAQAGVRY+++NP +Y+ SNI G + +LE + N Q
Sbjct: 61 LENYDDLSKVFVDEQPEVVVNLAAQAGVRYSIENPRTYIDSNIVGFMNILECSRHFNIQ- 119
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFF 270
++++ASSSSVYG N + PFS +D D P SLYAATKK+ E +AHTY+H+Y L TGLRFF
Sbjct: 120 NLIYASSSSVYGANTSKPFSTSDNIDHPLSLYAATKKSNELMAHTYSHLYNLPTTGLRFF 179
Query: 271 TVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTSAG 330
TVYGPWGRPDMA F FT+ I+ + I VY NH ++ RDFTY+DDIV+ + A
Sbjct: 180 TVYGPWGRPDMALFKFTKAIVNDQAIDVY---NHGNMMRDFTYVDDIVEAISRLVKKPAS 236
Query: 331 P---------------APYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDV 375
P APY+++N+GN SPV + + V +E L +A+KN +++ GDV
Sbjct: 237 PNKEWSGADPDPGSSYAPYKVYNIGNNSPVRLMEFVEAIENKLGKEARKNYMDLQP-GDV 295
Query: 376 PFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYY 412
P T+AN+ ++ ++P T +Q G+ KFV WYL YY
Sbjct: 296 PETYANVDDLFRDIDFKPETTIQDGVNKFVDWYLEYY 332
>sp|Q58455|Y1055_METJA Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1055 PE=3 SV=1
Length = 326
Score = 282 bits (721), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 146/322 (45%), Positives = 212/322 (65%), Gaps = 11/322 (3%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGDG--VVGLDNFNNYYDPSLKKARKALLNNHGVFV-IE 148
++LVTG+AGF+G H+S L + V+G+DN NNYY+P LK+ R +L N+ + I+
Sbjct: 5 NILVTGSAGFIGFHLSKYLMDNYEDLKVIGIDNLNNYYNPVLKEKRNEILKNYENYTFIK 64
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
D +D L + ++HL AQAGVRY++QNP +Y+ SN G + + E + +
Sbjct: 65 LDFSDWDDLVENLKDKEIDLIVHLGAQAGVRYSLQNPWAYIKSNEMGTLNIFEFARRFDI 124
Query: 209 QPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
+ +V+ASSSSVYG N +PFSE DR D+P SLYA+TK++ E +AH Y+H+YG+ + GLR
Sbjct: 125 E-KVVYASSSSVYGGNRKIPFSEDDRVDKPISLYASTKRSNELMAHVYHHLYGIKMIGLR 183
Query: 269 FFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTS 328
FFTVYG +GRPDMAYF F +NIL GK I VY N+ ++ RDFTYI D+V G L ++
Sbjct: 184 FFTVYGEYGRPDMAYFKFAKNILLGKEIEVY---NYGNMERDFTYISDVVDGILRAIKKD 240
Query: 329 AGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKE 388
Y IFNLGN+ PV + + ++E++L KAKK + M +GDV T+A++S ++K
Sbjct: 241 ---FDYEIFNLGNSKPVKLMYFIELIEKYLNKKAKKKFLPMQ-DGDVLRTYADLSKSEKL 296
Query: 389 FGYRPTTDLQTGLKKFVRWYLS 410
GY+P ++ GLK+F W+L
Sbjct: 297 LGYKPKVTIEEGLKRFCNWFLE 318
>sp|O54067|LPSL_RHIME UDP-glucuronate 5'-epimerase OS=Rhizobium meliloti (strain 1021)
GN=lspL PE=3 SV=2
Length = 341
Score = 255 bits (652), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 137/339 (40%), Positives = 200/339 (58%), Gaps = 22/339 (6%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLN-NHGVFVIEG 149
M L+TG AGF+G HV+ L G VVG D YYD +LK+ R A+L ++G +
Sbjct: 1 MRYLITGTAGFIGFHVAKRLIDEGHFVVGFDGMTPYYDVTLKERRHAILQRSNGFKAVTA 60
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
+ D L + + ++HLAAQAGVRY+++NP +YV +N+ G +LE K+ P+
Sbjct: 61 MLEDRAALDRAAELAEPEVIIHLAAQAGVRYSLENPKAYVDANLVGSWNMLELAKAIAPK 120
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRF 269
++ AS+SS+YG NE +PF+EADR D+P +LYAATKK+ E +AH+Y H+Y + T RF
Sbjct: 121 -HLMLASTSSIYGANEKIPFAEADRADEPMTLYAATKKSMELMAHSYAHLYKVPTTSFRF 179
Query: 270 FTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCL------- 322
FTVYGPWGRPDMA F F I G+PI +Y G+ ++RDFTYIDD+V+ +
Sbjct: 180 FTVYGPWGRPDMALFKFVDAIHNGRPIDIY-GEGR--MSRDFTYIDDLVESIVRLSHVPP 236
Query: 323 ---------GSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNG 373
+ DT + AP+R+ N G PV + V +E+ + A N++ M G
Sbjct: 237 SEENRVAPEKATDTLSRHAPFRVVNTGGGQPVELMTFVETVEKAVGRPAIHNMLPM-QQG 295
Query: 374 DVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYY 412
DVP T A+ + G++P+ ++ G+ +FV WY Y
Sbjct: 296 DVPRTFASPDLLEALTGFKPSVSVEEGVARFVEWYDQNY 334
>sp|O34886|YTCB_BACSU Uncharacterized UDP-glucose epimerase YtcB OS=Bacillus subtilis
(strain 168) GN=ytcB PE=3 SV=1
Length = 316
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 170/335 (50%), Gaps = 35/335 (10%)
Query: 91 MSVLVTGAAGFVGTHVSLAL-KKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFV-IE 148
M +LVTGAAGF+G+H+ L K + V+G+D+F SLK L F I+
Sbjct: 1 MKILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSLKLKNLKNLLPEKRFTFIK 60
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNP-HSYVHSNIAGLVTLLEACKSAN 207
++ A L A L + V + HLAA GVR + N H Y NI L LLEAC+ +
Sbjct: 61 ENLLTADL-ASLLEGVDV--IFHLAAIPGVRSSWGNHFHPYAAHNIQALQRLLEACREHS 117
Query: 208 PQPSIVWASSSSVYG-----LNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGL 262
Q + V+AS+SSVYG ++EN S P S Y TK GE++ H Y +G+
Sbjct: 118 IQ-TFVFASTSSVYGEKQGKVSENTSLS-------PLSPYGVTKLTGEKLCHVYKQSFGI 169
Query: 263 SITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCL 322
I LRFFTVYGP RPDMA+ + LQ KP+T++ +RDFTYI D VKG
Sbjct: 170 PIVILRFFTVYGPRQRPDMAFHRLIKQHLQQKPLTIFGDGQQ---SRDFTYISDCVKGIT 226
Query: 323 GSLDTSAGPAPYRI---FNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGN--GDVPF 377
L P+ I N+G +V K+V+++E + +K + G+
Sbjct: 227 AVLG-----KPHLIGETVNIGGAERASVLKVVSLIE---DISGRKATLHFSDKIAGEPSN 278
Query: 378 THANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYY 412
T A+IS A++ Y P T L+ GL + + S Y
Sbjct: 279 TWADISKAKQLLHYDPATSLKDGLTNEIAYLSSLY 313
>sp|Q04973|VIPB_SALTI Vi polysaccharide biosynthesis protein VipB/TviC OS=Salmonella
typhi GN=vipB PE=3 SV=1
Length = 348
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 164/330 (49%), Gaps = 24/330 (7%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNH--GVFVIEGDI 151
L+TG AGF+G+ + L V+GLDNF+ Y +L R ++ I+GDI
Sbjct: 19 LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI 78
Query: 152 ---NDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
D + K D +V+H AA V ++++P + +NI G + +L A + A+
Sbjct: 79 RKFTDCQKACKNVD-----YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHV 133
Query: 209 QPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
S +A+SSS YG + ++P E +R +P S YA TK E A + Y + GLR
Sbjct: 134 S-SFTYAASSSTYGDHPDLPKIE-ERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLR 191
Query: 269 FFTVYGPWGRPDMAYFS----FTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGS 324
+F V+G P+ AY + + ++L+ +PI + +RDF YI+++++ L S
Sbjct: 192 YFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYI---NGDGSTSRDFCYIENVIQANLLS 248
Query: 325 LDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMP-----GNGDVPFTH 379
T+ + +++N+ ++ +L ++ L + + P +GDV +
Sbjct: 249 ATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQ 308
Query: 380 ANISSAQKEFGYRPTTDLQTGLKKFVRWYL 409
A+I+ + Y P D++ GLK+ ++WY+
Sbjct: 309 ADITKIKTFLSYEPEFDIKEGLKQTLKWYI 338
>sp|Q57664|GALE_METJA Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0211 PE=3 SV=1
Length = 305
Score = 118 bits (296), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 146/320 (45%), Gaps = 28/320 (8%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIN 152
+LVTG AGF+G+H+ L + V+ LDN L K +N FV DI
Sbjct: 2 ILVTGGAGFIGSHIVDKLIENNYDVIILDN--------LTTGNKNNINPKAEFV-NADIR 52
Query: 153 DAKLLAKL-FDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPS 211
D L K+ F V V+H AAQ VR +++NP N+ G + +LE + +
Sbjct: 53 DKDLDEKINFKDVEV--VIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKI 110
Query: 212 IVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFT 271
+ +S +VYG +P E + P S Y +K GEE YN +YG+ LR+
Sbjct: 111 VFASSGGAVYGEPNYLPVDE-NHPINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSN 169
Query: 272 VYG----PWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDT 327
VYG P G + + + PI G RDF Y+ D+ K L +L+
Sbjct: 170 VYGERQDPKGEAGVISIFIDKMLKNQSPIIFGDGNQ----TRDFVYVGDVAKANLMALNW 225
Query: 328 SAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQK 387
I N+G +V +L +I++ + + + + + P G+V + +I A+
Sbjct: 226 KN-----EIVNIGTGKETSVNELFDIIKHEIGFRGEA-IYDKPREGEVYRIYLDIKKAES 279
Query: 388 EFGYRPTTDLQTGLKKFVRW 407
G++P DL+ G+K+ V W
Sbjct: 280 -LGWKPEIDLKEGIKRVVNW 298
>sp|O06485|YFNG_BACSU Putative sugar dehydratase/epimerase YfnG OS=Bacillus subtilis
(strain 168) GN=yfnG PE=3 SV=2
Length = 322
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 145/335 (43%), Gaps = 36/335 (10%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGDGVVGL-----DNFNNYYDPSLKKARKALLNNHGVFV 146
+V VTG G +G+++ L ++G V GL N Y +KK +
Sbjct: 8 NVFVTGCTGLLGSYLVKELIEQGANVTGLVRDHVPQSNLYQGEHIKKMN----------I 57
Query: 147 IEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSA 206
+ G + D ++ + V HLAAQA V A +NP S +NI G +LEAC+
Sbjct: 58 VRGSLEDLAVIERALGEYEIDTVFHLAAQAIVGVANRNPISTFEANILGTWNILEACRKH 117
Query: 207 NPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITG 266
++ ASS YG EN+P+ E + Q Y +K + I+HTY H YGL +
Sbjct: 118 PLIKRVIVASSDKAYGDQENLPYDE-NMPLQGKHPYDVSKSCADLISHTYFHTYGLPVCI 176
Query: 267 LRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHV----DLARDFTYIDDIVKGCL 322
R +YG +F R I Q + + + RD+ YI+D V+ L
Sbjct: 177 TRCGNLYGG------GDLNFNRIIPQTIQLVLNGEAPEIRSDGTFVRDYFYIEDAVQAYL 230
Query: 323 -----GSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPF 377
+ AG A FN N +TV +LV + + + K V+ G+ ++
Sbjct: 231 LLAEKMEENNLAGEA----FNFSNEIQLTVLELVEKILKKMNSNLKPKVLNQ-GSNEIKH 285
Query: 378 THANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYY 412
+ + A+K + P + GL+K + WY ++
Sbjct: 286 QYLSAEKARKLLNWTPAYTIDEGLEKTIEWYTEFF 320
>sp|Q57301|GALE_YEREN UDP-glucose 4-epimerase OS=Yersinia enterocolitica GN=galE PE=3
SV=1
Length = 336
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 158/343 (46%), Gaps = 26/343 (7%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
MS+L+TG AG++G+H L L ++G VV LDN N SL + K + GD
Sbjct: 1 MSILITGGAGYIGSHTVLTLLEQGRNVVVLDNLINSSAESLARVSKICGRKPNFY--HGD 58
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I D L +F + V+H A V +++ P Y +N+ G +TLLE AN +
Sbjct: 59 ILDRSCLKLIFSSHKIDSVIHFAGLKSVGESVEKPIEYYQNNVVGSITLLEEMCLANVK- 117
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIY-GLSITGLRF 269
++++SS++VYG E VP +E R + Y +K E+I ++ + SIT LR+
Sbjct: 118 KLIFSSSATVYGEPEFVPLTEKARIGGTTNPYGTSKVMVEQILKDFSLAHPDYSITALRY 177
Query: 270 FTVYG----------PWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLA-----RDFTYI 314
F G P G+P+ F + GK + N D RD+ ++
Sbjct: 178 FNPVGAHPSGLIGEDPNGKPN-NLLPFITQVAIGKLSKLLVYGNDYDTPDGSGIRDYIHV 236
Query: 315 DDIVKGCLGSL-DTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNG 373
D+ +G L +L + ++G +RI+NLG +V ++ ER +++ G
Sbjct: 237 MDLAEGHLSTLINLTSG---FRIYNLGTGVGYSVLHMIKEFERITGKNIPFDIVSRR-PG 292
Query: 374 DVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWY-LSYYGYN 415
D+ A+ A E G+ L L+ +W ++ GYN
Sbjct: 293 DIAECWASPELAHLELGWYAKRTLVDMLQDAWKWQKMNPNGYN 335
>sp|Q14376|GALE_HUMAN UDP-glucose 4-epimerase OS=Homo sapiens GN=GALE PE=1 SV=2
Length = 348
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 156/345 (45%), Gaps = 43/345 (12%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYD------PSLKKARKALLNNHGVFV 146
VLVTG AG++G+H L L + G V +DNF+N + SL++ ++ L V
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQE--LTGRSVEF 62
Query: 147 IEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSA 206
E DI D L +LF +F V+H A V ++Q P Y N+ G + LLE K A
Sbjct: 63 EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK-A 121
Query: 207 NPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAH-------TYNHI 259
+ ++V++SS++VYG + +P EA T + Y +K EE+ T+N +
Sbjct: 122 HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAV 181
Query: 260 YGLSITGLRFFTVYG----------PWGRPD--MAYFSFTRNILQGKPITVYRGKNHVDL 307
LR+F G P G P+ M Y S + G+ + N D
Sbjct: 182 L------LRYFNPTGAHASGCIGEDPQGIPNNLMPYVS---QVAIGRREALNVFGNDYDT 232
Query: 308 -----ARDFTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKA 362
RD+ ++ D+ KG + +L RI+NLG + +V ++V +E+ K
Sbjct: 233 EDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKI 292
Query: 363 KKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
V+ GDV +AN S AQ+E G+ L + RW
Sbjct: 293 PYKVVARR-EGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRW 336
>sp|P35673|GALE_ERWAM UDP-glucose 4-epimerase OS=Erwinia amylovora GN=galE PE=3 SV=1
Length = 337
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 149/333 (44%), Gaps = 21/333 (6%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
MS+LVTG AG++G+H L+L +RGD VV LDN +N S+ + K L EGD
Sbjct: 1 MSILVTGGAGYIGSHTVLSLLQRGDDVVILDNLSNASRESINRVEK--LTGKTATFFEGD 58
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
+ D L +F A + V+H A V + + P Y +N+ G + LLE +SA
Sbjct: 59 LLDRSCLRSVFSAHRISAVIHFAGLKAVGASTRKPLEYYQNNVTGTLVLLEEMRSAGVN- 117
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIY-GLSITGLRF 269
+++SS++VYG + VP+ E S Y +K E+I Y LR+
Sbjct: 118 QFIFSSSATVYGADAPVPYVETTPIGGTTSPYGTSKLMVEQILRDYAKANPEFKTIALRY 177
Query: 270 FTVYG----------PWGRPD-----MAYFSFTRNILQGKPITVYRGKNHVDLARDFTYI 314
F G P G P+ +A + R G Y ++ + RD+ ++
Sbjct: 178 FNPVGAHESGQMGEDPNGIPNNLLPYIAQVAIGRLEKLGIFGDDYPTEDGTGV-RDYIHV 236
Query: 315 DDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGD 374
D+ +G L +LD + Y+ +NLG +V ++V E+ I +GD
Sbjct: 237 MDLAEGHLKALDHLSAIEGYKAYNLGAGKGYSVLEMVKAFEKASGGTVAYQ-ISPRRDGD 295
Query: 375 VPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
+ A+ + A KE +R + + ++ W
Sbjct: 296 LAAFWADATLADKELNWRVSRGIDEMMRDTWNW 328
>sp|Q9CNY5|GALE_PASMU UDP-glucose 4-epimerase OS=Pasteurella multocida (strain Pm70)
GN=galE PE=3 SV=1
Length = 338
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 151/333 (45%), Gaps = 21/333 (6%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M++LVTG AG++G+H + L VV LDN N SL+ R A + V +GD
Sbjct: 1 MAILVTGGAGYIGSHTVVELLNANKDVVVLDNLCNSSPKSLE--RVAQITGKQVKFYQGD 58
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I D LL K+F V+H A V ++Q P Y +N+ G + L++ K A
Sbjct: 59 ILDTALLQKIFAENQIQSVIHFAGLKAVGESVQKPAEYYMNNVTGSLVLIQEMKKAGVW- 117
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIY-GLSITGLRF 269
+ V++SS++VYG E +P +E+ + + Y +K E+I SIT LR+
Sbjct: 118 NFVFSSSATVYGDPEIIPITESCKVGGTTNPYGTSKFMVEQILKDIAKATPEFSITILRY 177
Query: 270 FTVYG----------PWGRPDMAYFSFTRNILQGK-PITVYRGKNHVDL----ARDFTYI 314
F G P G P+ + + GK P G ++ RD+ ++
Sbjct: 178 FNPVGAHESGLIGEDPNGIPN-NLLPYISQVAIGKLPQLSVFGSDYETHDGTGVRDYIHV 236
Query: 315 DDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGD 374
D+ G L +LD G A I+NLG S +V +V E+ +K +++ GD
Sbjct: 237 VDLAIGHLKALDRHEGDAGLHIYNLGTGSGYSVLDMVKAFEKVNDIKIPYKLVDRR-PGD 295
Query: 375 VPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
+ +++ S A+ E + L+ +K W
Sbjct: 296 IATCYSDPSLAKTELNWTAARGLEQMMKDTWHW 328
>sp|Q5R8D0|GALE_PONAB UDP-glucose 4-epimerase OS=Pongo abelii GN=GALE PE=2 SV=1
Length = 348
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 155/345 (44%), Gaps = 43/345 (12%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYD------PSLKKARKALLNNHGVFV 146
VLVTG AG++G+H L L + G V +DNF+N + SL++ ++ L V
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQE--LTGRSVEF 62
Query: 147 IEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSA 206
E DI D L +LF +F V+H A V ++Q P Y N+ G + LLE K A
Sbjct: 63 EEMDILDQGALQRLFKKHSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK-A 121
Query: 207 NPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAH-------TYNHI 259
+ ++V++SS++VYG + +P EA T + Y +K EE+ T+N +
Sbjct: 122 HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAV 181
Query: 260 YGLSITGLRFFTVYG----------PWGRPD--MAYFSFTRNILQGKPITVYRGKNHVDL 307
LR+F G P G P+ M Y S + G+ + N D
Sbjct: 182 L------LRYFNPTGAHASGCIGEDPQGIPNNLMPYVS---QVAIGRREALNVFGNDYDT 232
Query: 308 -----ARDFTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKA 362
RD+ ++ D+ KG + +L RI+NLG + +V ++V +E+ K
Sbjct: 233 EDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKI 292
Query: 363 KKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
V+ GDV +AN S A +E G+ L + RW
Sbjct: 293 PYKVVARR-EGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 336
>sp|Q45291|GALE_CORGL UDP-glucose 4-epimerase OS=Corynebacterium glutamicum (strain ATCC
13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
GN=galE PE=3 SV=2
Length = 329
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 163/321 (50%), Gaps = 27/321 (8%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M +LVTG AG+VG+ + L + G V +DNF+ R+A+ + +IEGD
Sbjct: 1 MKLLVTGGAGYVGSVAAAVLLEHGHDVTIIDNFST-------GNREAVPAD--ARLIEGD 51
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
+ND ++ ++ F V+H AA++ V +++ P+ Y H N+ +TLL+A + A+
Sbjct: 52 VND--VVEEVLSEGGFEGVVHFAARSLVGESVEKPNEYWHDNVVTALTLLDAMR-AHGVN 108
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFF 270
++V++S+++ YG + VP +E D QP + Y ATK + + +Y +GL+ T LR+F
Sbjct: 109 NLVFSSTAATYGEPDVVPITE-DMPTQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYF 167
Query: 271 TVYGPWGRPDMAYFSFTRNI-LQGKPITVYRGKNHV----------DLARDFTYIDDIVK 319
V G +G T I L + T +R K + RD+ +I D+ K
Sbjct: 168 NVAGAYGNIGENREVETHLIPLVLQVATGHREKTFMFGDDWPTPDGTAVRDYIHILDLAK 227
Query: 320 GCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTH 379
+ +L+++ +RIFNLG+ +V ++V + R + + GD
Sbjct: 228 AHVLALESNEA-GKHRIFNLGSGDGYSVKQVVEMC-REVTGHPIPAEVAPRRAGDPATLI 285
Query: 380 ANISSAQKEFGYRPT-TDLQT 399
A+ A++E G+ P TDL+T
Sbjct: 286 ASSEKAKQELGWTPEHTDLRT 306
>sp|Q6MWV3|GALE_MYCTU UDP-glucose 4-epimerase OS=Mycobacterium tuberculosis GN=galE1 PE=3
SV=1
Length = 314
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 143/326 (43%), Gaps = 26/326 (7%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M LVTGAAGF+G+ + L G VVGLDNF +L+ L +N +E D
Sbjct: 1 MRALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEH----LADNSAHVFVEAD 56
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I A L A + + V HLAAQ VR ++ +P N+ G V L EA + +
Sbjct: 57 IVTADLHA-ILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRK 115
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFF 270
+ +S S+YG P E TD PAS YAA K AGE +T+ H+YGL + +
Sbjct: 116 IVHTSSGGSIYGTPPEYPTPETAPTD-PASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPA 174
Query: 271 TVYGPWGRPD---MAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDT 327
VYGP P F + +L GKP V+ + + D + S D
Sbjct: 175 NVYGPRQDPHGEAGVVAIFAQALLSGKPTRVF--GDGTNTRDYVFVDDVVDAFVRVSADV 232
Query: 328 SAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKA-----KKNVIEMPGNGDVPFTHANI 382
G FN+G + +L H V A P GD+ + +I
Sbjct: 233 GGG----LRFNIGTGKETSDRQL------HSAVAAAVGGPDDPEFHPPRLGDLKRSCLDI 282
Query: 383 SSAQKEFGYRPTTDLQTGLKKFVRWY 408
A++ G+RP +L G+++ V ++
Sbjct: 283 GLAERVLGWRPQIELADGVRRTVEYF 308
>sp|P24325|GALE_HAEIN UDP-glucose 4-epimerase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=galE PE=3 SV=2
Length = 338
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 149/333 (44%), Gaps = 21/333 (6%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M++LVTG AG++G+H + L G VV LDN N SL++ ++ + EGD
Sbjct: 1 MAILVTGGAGYIGSHTVVELLNVGKEVVVLDNLCNSSPKSLERVKQ--ITGKEAKFYEGD 58
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I D LL K+F V+H A V ++Q P Y +N+AG + L++ K A
Sbjct: 59 ILDRALLQKIFAENEINSVIHFAGLKAVGESVQKPTEYYMNNVAGTLVLIQEMKKAGVW- 117
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAH-TYNHIYGLSITGLRF 269
+ V++SS++VYG + +P +E + Y +K E+I T S+T LR+
Sbjct: 118 NFVFSSSATVYGDPKIIPITEDCEVGGTTNPYGTSKYMVEQILRDTAKAEPKFSMTILRY 177
Query: 270 FTVYG----------PWGRPDMAYFSFTRNILQGKPITVYRGKNHVDL-----ARDFTYI 314
F G P G P+ + + GK + + D RD+ ++
Sbjct: 178 FNPVGAHESGLIGEDPNGIPN-NLLPYISQVAIGKLAQLSVFGSDYDTHDGTGVRDYIHV 236
Query: 315 DDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGD 374
D+ G L +L A I+NLG +V +V E+ + ++E +GD
Sbjct: 237 VDLAVGHLKALQRHENDAGLHIYNLGTGHGYSVLDMVKAFEKANNITIAYKLVERR-SGD 295
Query: 375 VPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
+ +++ S A KE G+ L+ ++ W
Sbjct: 296 IATCYSDPSLAAKELGWVAERGLEKMMQDTWNW 328
>sp|O64749|ARAE2_ARATH Putative UDP-arabinose 4-epimerase 2 OS=Arabidopsis thaliana
GN=At2g34850 PE=2 SV=3
Length = 417
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 160/340 (47%), Gaps = 28/340 (8%)
Query: 89 GGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIE 148
G VLVTG AG++G+H +L L K V +DN + ++K ++ + I
Sbjct: 68 GVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKILQQLFPEPGKLQFIY 127
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
D+ DA + K+F AF VMH AA A V + Q P Y H+ + + +LE +A+
Sbjct: 128 ADLGDANAVNKIFSENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETM-AAHG 186
Query: 209 QPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLR 268
+++++S+ + YG E +P +E + P + Y KK E+I ++ +++ LR
Sbjct: 187 VKTLIYSSTCATYGEPEKMPITE-ETPQVPINPYGKAKKMAEDIILDFSKNSIMAVMILR 245
Query: 269 FFTVYG--PWG------RPDM--------AYFSFTRNILQGKPITVYRGKNH--VD--LA 308
+F V G P G RP++ A F R I+ G I +G ++ VD
Sbjct: 246 YFNVIGSDPEGRLGEAPRPELSEHGRISGACFDAARGIIPGLQI---KGTDYKTVDGTCV 302
Query: 309 RDFTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIE 368
RD+ + D+V + +L+ A P IFN+G +V + V ++ V K + +E
Sbjct: 303 RDYIDVTDLVDAHVKALE-KAKPRKVGIFNVGTGKGSSVKEFVEACKKATGVDIKVDYLE 361
Query: 369 MPGNGDVPFTHANISSAQKEFGYRPT-TDLQTGLKKFVRW 407
GD +++ ++E + T+LQ LK RW
Sbjct: 362 RRA-GDYAEVYSDPRKIKEELNWTAKHTNLQESLKMAWRW 400
>sp|Q05026|GALE_NEIGO UDP-glucose 4-epimerase OS=Neisseria gonorrhoeae GN=galE PE=3 SV=1
Length = 338
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 154/337 (45%), Gaps = 29/337 (8%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M+VL+TG GF+G+H +++L + G V LDN N L + R+ + + +GD
Sbjct: 1 MTVLITGGTGFIGSHTAVSLVQSGYDAVILDNLCNSSAAVLPRLRQ--ITGRNIPFYQGD 58
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I D ++L ++F V+H A V ++ P Y +N+ G + L E A
Sbjct: 59 IRDCQILRQIFSEHEIESVIHFAGLKAVGESVAEPTKYYGNNVYGSLVLAEEMARAGVL- 117
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYG-LSITGLRF 269
IV++SS++VYG E VP++E R A+ Y A+K E + S+ LR+
Sbjct: 118 KIVFSSSATVYGDAEKVPYTEDMRPGDTANPYGASKAMVERMLTDIQKADPRWSVILLRY 177
Query: 270 FTVYG----------PWGRPDMAYFSFTRNILQGK--PITVYRGKNHVDLA---RDFTYI 314
F G P G P+ + + G+ ++V+ G RD+ ++
Sbjct: 178 FNPIGAHESGLIGEQPNGVPN-NLLPYICQVASGRLPQLSVFGGDYPTPDGTGMRDYIHV 236
Query: 315 DDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILER----HLKVKAKKNVIEMP 370
D+ +G + ++ G A +FNLG+ +V +++ E H+ + I+
Sbjct: 237 MDLAEGHIAAMKAKGGVAGVHLFNLGSGRAYSVLEIIRAFEAASGLHIPYR-----IQPR 291
Query: 371 GNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
GD+ ++A+ S +++ G+ LQ ++ RW
Sbjct: 292 RAGDLACSYADPSHTKQQTGWETKRGLQQMMEDSWRW 328
>sp|Q9SA77|ARAE1_ARATH UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana GN=MUR4 PE=1
SV=1
Length = 419
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 160/341 (46%), Gaps = 24/341 (7%)
Query: 86 HRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVF 145
H G VLVTG AG++G+H +L L K V +DN + +++ ++ +
Sbjct: 66 HEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRLQ 125
Query: 146 VIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKS 205
I D+ DAK + K+F AF VMH AA A V + Q P Y H+ + + +LE +
Sbjct: 126 FIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETM-A 184
Query: 206 ANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSIT 265
A+ +++++S+ + YG + +P +E + P + Y KK E+I ++ +++
Sbjct: 185 AHGVKTLIYSSTCATYGEPDIMPITE-ETPQVPINPYGKAKKMAEDIILDFSKNSDMAVM 243
Query: 266 GLRFFTVYG--PWG------RPDM--------AYFSFTRNILQGKPI--TVYRGKNHVDL 307
LR+F V G P G RP++ A F R I+ G I T Y+ +
Sbjct: 244 ILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQIKGTDYKTADGT-C 302
Query: 308 ARDFTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVI 367
RD+ + D+V + +L A P I+N+G +V + V ++ V+ K + +
Sbjct: 303 VRDYIDVTDLVDAHVKALQ-KAKPRKVGIYNVGTGKGSSVKEFVEACKKATGVEIKIDYL 361
Query: 368 EMPGNGDVPFTHANISSAQKEFGYRPT-TDLQTGLKKFVRW 407
GD +++ S +KE + T+L+ L+ RW
Sbjct: 362 PRRA-GDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRW 401
>sp|P33119|GALE_CORDI UDP-glucose 4-epimerase OS=Corynebacterium diphtheriae (strain ATCC
700971 / NCTC 13129 / Biotype gravis) GN=galE PE=3 SV=2
Length = 328
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 151/325 (46%), Gaps = 35/325 (10%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M +LVTG AG+VG+ S L ++G V +DN R A+ G +EGD
Sbjct: 1 MKLLVTGGAGYVGSVCSTVLLEQGHEVTIVDNLTT-------GNRDAV--PLGATFVEGD 51
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I D + + + +F V+H AA++ V +++ P Y N+ + LL+A K N +
Sbjct: 52 IKD--VADNVLSSDSFDAVLHFAARSLVGESVEKPDEYWQHNMVTTLALLDAMKRNNVR- 108
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFF 270
+IV++S+++ YG E VP +E D P + Y ATK + + +Y H YG + T LR+F
Sbjct: 109 NIVFSSTAATYGEPETVPITE-DAPTHPTNPYGATKLSIDYAITSYAHAYGFAATSLRYF 167
Query: 271 TVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDL---------------ARDFTYID 315
V G +G T I P+ + H D RD+ +I
Sbjct: 168 NVAGAYGLVGENREIETHLI----PLVLQVALGHRDKIFMFGDDWPTEDGTPIRDYIHIR 223
Query: 316 DIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDV 375
D+ + +L ++ +RIFNLG+ +V ++++ R + + GD
Sbjct: 224 DLADAHILALQSNV-EGSHRIFNLGSGEGYSVKQVIDTC-REVTGHLIPAEVAPRRAGDP 281
Query: 376 PFTHANISSAQKEFGYRPT-TDLQT 399
A+ + AQ E G++P TDL T
Sbjct: 282 AVLIASSAKAQSELGWKPQRTDLHT 306
>sp|Q59678|GALE_PASHA UDP-glucose 4-epimerase OS=Pasteurella haemolytica GN=galE PE=3
SV=1
Length = 338
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 150/333 (45%), Gaps = 21/333 (6%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M++LVTG AG++G+H + L +V LDN +N + SL++ ++ + V +GD
Sbjct: 1 MAILVTGGAGYIGSHTLVELLNENREIVVLDNLSNSSEVSLERVKQ--ITGKSVKFYQGD 58
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I D +L K+F V+H A V +N + + +N+ G + L+E AN
Sbjct: 59 ILDRDILRKIFAENQIESVIHFAGLKAVGETSENRYVTIKNNVTGSIVLVEEMLKANVN- 117
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAH-TYNHIYGLSITGLRF 269
+IV++SS++VYG + +P E+ + Y +K E I T LS LR+
Sbjct: 118 TIVFSSSATVYGDPQIIPIVESCPVGGTTNPYGTSKYMVERILEDTVKAFPQLSAVVLRY 177
Query: 270 FTVYG----------PWGRPDMAYFSFTRNILQGK--PITVYRGKNHVDLA---RDFTYI 314
F G P G P+ F + GK ++V+ G + RD+ ++
Sbjct: 178 FNRVGAHESGLIGEDPNGIPN-NLMPFISQVAVGKLPQLSVFGGDYNTHDGTGVRDYIHV 236
Query: 315 DDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGD 374
D+ G L +LD A + ++NLG + +V +V E + V++ GD
Sbjct: 237 VDLALGHLKALDKHQNDAGFHVYNLGTGTGYSVLDMVKAFEAANGITIPYKVVDRR-PGD 295
Query: 375 VPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
+ ++ A ++ G+ L+ +K W
Sbjct: 296 IAVCYSAPQKALEQLGWETERGLEQMMKDTWNW 328
>sp|Q8R059|GALE_MOUSE UDP-glucose 4-epimerase OS=Mus musculus GN=Gale PE=2 SV=1
Length = 347
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 152/338 (44%), Gaps = 29/338 (8%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNY------YDPSLKKARKALLNNHGVFV 146
VLVTG AG++G+H L L + G V +DNF+N SL++ ++ L V
Sbjct: 4 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGEDSMPESLRRVQE--LTGRSVEF 61
Query: 147 IEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSA 206
E DI D L LF +F V+H A V ++Q P Y N+ G + LLE + A
Sbjct: 62 EEMDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMR-A 120
Query: 207 NPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHI-YGLSIT 265
+ ++V++SS++VYG + +P EA T + Y +K EE+ +
Sbjct: 121 HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCRADTAWNAV 180
Query: 266 GLRFFTVYG----------PWGRPD--MAYFSFTRNILQGKPITVYRGKNHVDL----AR 309
LR+F G P G P+ M Y S I + + + V+ G ++ R
Sbjct: 181 LLRYFNPIGAHASGRIGEDPQGIPNNLMPYVSQV-AIGRREALNVF-GDDYATEDGTGVR 238
Query: 310 DFTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEM 369
D+ ++ D+ KG + +L R +NLG + +V ++V +E+ K V+
Sbjct: 239 DYIHVVDLAKGHIAALKKLKEQCGCRTYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVAR 298
Query: 370 PGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
GDV +AN S A +E G+ L + RW
Sbjct: 299 R-EGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 335
>sp|Q9T0A7|GALE3_ARATH UDP-glucose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g23920 PE=2
SV=1
Length = 350
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 159/345 (46%), Gaps = 44/345 (12%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARK-ALLNNHGVFVIEGD 150
SVLVTG AG++G+H L L + G V +DN++N SL++ +K A N + + + D
Sbjct: 4 SVLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVD 63
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLE-----ACKS 205
+ D L K+F F V+H A V +++ P Y ++NI G VTLLE CK
Sbjct: 64 LRDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCK- 122
Query: 206 ANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASL---YAATKKAGEEIAH-TYNHIYG 261
++V++SS++VYG + VP +E + P S Y TK EEI +
Sbjct: 123 -----NLVFSSSATVYGWPKEVPCTE----ESPISATNPYGRTKLFIEEICRDVHRSDSE 173
Query: 262 LSITGLRFFTVYG----------PWGRPDMAYFSFTRNILQGKP--ITV----YRGKNHV 305
I LR+F G P G P+ + + + G+ +TV Y+ K+
Sbjct: 174 WKIILLRYFNPVGAHPSGYIGEDPLGVPN-NLMPYVQQVAVGRRPHLTVFGTDYKTKDGT 232
Query: 306 DLARDFTYIDDIVKGCLGSL-DTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKK 364
+ RD+ ++ D+ G + +L ++NLG + +V ++V E K KK
Sbjct: 233 GV-RDYIHVMDLADGHIAALRKLDDLKISCEVYNLGTGNGTSVLEMVAAFE---KASGKK 288
Query: 365 NVIEMPGN--GDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
+ M G GD +A+ A++E ++ ++ + W
Sbjct: 289 IPLVMAGRRPGDAEVVYASTEKAERELNWKAKNGIEEMCRDLWNW 333
>sp|O95455|TGDS_HUMAN dTDP-D-glucose 4,6-dehydratase OS=Homo sapiens GN=TGDS PE=2 SV=1
Length = 350
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 142/329 (43%), Gaps = 20/329 (6%)
Query: 89 GGMS--VLVTGAAGFVGTH--VSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGV 144
GG + VLVTG AGF+ +H VSL ++ LD + Y SLK + + N
Sbjct: 14 GGFAKRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLD--YCASLKNL-ETISNKQNY 70
Query: 145 FVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACK 204
I+GDI D+ + LF+ V+H AAQ V + + + N+ G L+ A
Sbjct: 71 KFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAH 130
Query: 205 SANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSI 264
A + ++ S+ VYG + + F E+ QP + YA++K A E +Y Y +
Sbjct: 131 EARVE-KFIYVSTDEVYGGSLDKEFDESS-PKQPTNPYASSKAAAECFVQSYWEQYKFPV 188
Query: 265 TGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGS 324
R VYGP P+ F + + ++ R+F Y D+V+ L
Sbjct: 189 VITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQ---TRNFLYATDVVEAFLTV 245
Query: 325 LDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIE--MPGNGDVPFTHANI 382
L P I+N+G ++V +L L + +K ++ +E + D P
Sbjct: 246 LKKG---KPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRY 302
Query: 383 SSAQKE---FGYRPTTDLQTGLKKFVRWY 408
++ G+RP + G+KK + WY
Sbjct: 303 PMKSEKIHGLGWRPKVPWKEGIKKTIEWY 331
>sp|Q9KDV3|GALE_BACHD UDP-glucose 4-epimerase OS=Bacillus halodurans (strain ATCC BAA-125
/ DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=galE PE=3
SV=1
Length = 334
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 155/340 (45%), Gaps = 28/340 (8%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M++LVTG AG++G+H L L ++G+ V+ LDN L+K L++ V GD
Sbjct: 1 MAILVTGGAGYIGSHTVLFLLEQGEQVIVLDN--------LQKGHAGALSD--VTFYHGD 50
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I D +LL +F + V+H AA + V +++ P Y +N+ G TLL+ + +
Sbjct: 51 IRDDQLLDTIFTTHSIDTVIHFAANSLVGESVKQPIEYYENNVIGTHTLLKKMLEHDVK- 109
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFF 270
IV++S+++ YG +P E+D T P + Y TK A E++ H YGL LR+F
Sbjct: 110 KIVFSSTAATYGEPVQIPIQESDPT-IPTNPYGETKLAIEKMFHWCQEAYGLQYVCLRYF 168
Query: 271 TVYG--PWGR------PDMAYFSFTRNILQGK--PITVYRGKNHVD---LARDFTYIDDI 317
G P GR P+ + G+ + ++ + RD+ ++ D+
Sbjct: 169 NAAGADPNGRIGEDHSPESHLIPIVLQVALGQRERVAIFGDDYQTEDGSCIRDYIHVMDL 228
Query: 318 VKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPF 377
+ + FNLGN +V +++ + R + I +GD
Sbjct: 229 ANAHYLACEHLRKDGQSGSFNLGNGKGFSVKEVIEVC-RQVTGHPIPAEIAPRRSGDPAS 287
Query: 378 THANISSAQKEFGYRPT-TDLQTGLKKFVRWYLSY-YGYN 415
A+ AQ G+ P L+T ++ W+ + +GY+
Sbjct: 288 LIASSEKAQTILGWEPKYPSLETMVEHAWNWHKEHPHGYS 327
>sp|P09147|GALE_ECOLI UDP-glucose 4-epimerase OS=Escherichia coli (strain K12) GN=galE
PE=1 SV=1
Length = 338
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 147/336 (43%), Gaps = 27/336 (8%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M VLVTG +G++G+H + L + G V+ LDN N L + L H FV EGD
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIER-LGGKHPTFV-EGD 58
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I + L+ ++ A V+H A V ++Q P Y +N+ G + L+ A ++AN +
Sbjct: 59 IRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK- 117
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIY-GLSITGLRF 269
+ +++SS++VYG +P+ E+ T P S Y +K E+I SI LR+
Sbjct: 118 NFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRY 177
Query: 270 FTVYG----------PWGRPD--MAYFSFT----RNILQ--GKPITVYRGKNHVDLARDF 311
F G P G P+ M Y + R+ L G G RD+
Sbjct: 178 FNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTG----VRDY 233
Query: 312 TYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPG 371
++ D+ G + +++ A I+NLG +V +VN + +
Sbjct: 234 IHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPR-R 292
Query: 372 NGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
GD+P A+ S A +E +R T L + W
Sbjct: 293 EGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHW 328
>sp|Q8VDR7|TGDS_MOUSE dTDP-D-glucose 4,6-dehydratase OS=Mus musculus GN=Tgds PE=2 SV=2
Length = 355
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 141/327 (43%), Gaps = 26/327 (7%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDG--VVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
VLVTG AGF+ +HV ++L + +V LD + Y SLK + + N I+GD
Sbjct: 20 VLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLD--YCASLKNL-EPVSNKQNYKFIQGD 76
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I D+ + LF+ V+H AAQ V + + + N+ G L+ A A +
Sbjct: 77 ICDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVE- 135
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFF 270
++ S+ VYG + + F E+ QP + YA++K A E +Y Y + R
Sbjct: 136 KFIYVSTDEVYGGSLDQEFDESS-PKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSS 194
Query: 271 TVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTSAG 330
VYGP P+ F + + ++ R+F Y D+V+ L L
Sbjct: 195 NVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQ---RRNFLYAADVVEAFLTVLTKG-- 249
Query: 331 PAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKN--------VIEMPGNG-DVPFTHAN 381
P I+N+G ++V +L L + +K ++ V + P N P
Sbjct: 250 -EPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPMKSEK 308
Query: 382 ISSAQKEFGYRPTTDLQTGLKKFVRWY 408
I S G++P + G+KK V WY
Sbjct: 309 IHS----LGWKPKVPWEEGIKKTVEWY 331
>sp|A6QLW2|TGDS_BOVIN dTDP-D-glucose 4,6-dehydratase OS=Bos taurus GN=TGDS PE=2 SV=1
Length = 355
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 140/323 (43%), Gaps = 18/323 (5%)
Query: 93 VLVTGAAGFVGTH--VSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
VLVTG AGF+ +H VSL ++ LD + Y SLK + + N I+GD
Sbjct: 20 VLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLD--YCASLKNL-ETISNKQNYKFIQGD 76
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I D+ + LF+ V+H AAQ V + + + N+ G L+ A A +
Sbjct: 77 ICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVE- 135
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFF 270
++ S+ VYG + + F E+ QP + YA++K A E +Y Y + R
Sbjct: 136 KFIYVSTDEVYGGSLDKEFDESS-PKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSS 194
Query: 271 TVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDTSAG 330
VYGP P+ F ++LQ G R+F Y D+V+ L L
Sbjct: 195 NVYGPHQYPEKVIPKFI-SLLQHNRKCCIHGTGL--QTRNFLYATDVVEAFLTVLKKG-- 249
Query: 331 PAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIE--MPGNGDVPFTHANISSAQKE 388
P I+N+G ++V +L L + +K ++ +E + D P ++
Sbjct: 250 -KPGEIYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPMKSEK 308
Query: 389 ---FGYRPTTDLQTGLKKFVRWY 408
G+RP + G+KK + WY
Sbjct: 309 IHGLGWRPKVPWKEGIKKTIEWY 331
>sp|Q56093|GALE_SALTI UDP-glucose 4-epimerase OS=Salmonella typhi GN=galE PE=3 SV=2
Length = 338
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 151/333 (45%), Gaps = 21/333 (6%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M VLVTG +G++G+H + L + G VV LDN N L + L H FV EGD
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIER-LGGKHPTFV-EGD 58
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I + L+ ++ A V+H A V ++ P Y +N+ G + L+ A ++AN +
Sbjct: 59 IRNEALITEILHDHAIDTVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLVSAMRAANVK- 117
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIY-GLSITGLRF 269
+++++SS++VYG +P+ E+ T P S Y +K E+I SI LR+
Sbjct: 118 NLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIALLRY 177
Query: 270 FTVYG----------PWGRPD--MAYFSFTRNILQGKPITVYRGKNHVDLA---RDFTYI 314
F G P G P+ M Y + + + + + V+ + RD+ ++
Sbjct: 178 FNPVGAHPSGDMGEDPQGIPNNLMPYIAQVA-VGRRESLAVFGNDYPTEDGTGVRDYIHV 236
Query: 315 DDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGD 374
D+ G + +++ A + I+NLG +V +VN + K +GD
Sbjct: 237 MDLADGHVVAMEKLADKSGVHIYNLGAGVGSSVLDVVNAFSKACG-KPINYHFAPRRDGD 295
Query: 375 VPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
+P A+ S A +E +R T L + W
Sbjct: 296 LPAYWADASKADRELNWRVTRTLDEMAQDTWHW 328
>sp|P22715|GALE_SALTY UDP-glucose 4-epimerase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=galE PE=3 SV=2
Length = 338
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 151/333 (45%), Gaps = 21/333 (6%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M VLVTG +G++G+H + L + G VV LDN N L + L H FV EGD
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIER-LGGKHPTFV-EGD 58
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I + L+ ++ A V+H A V ++ P Y +N+ G + L+ A ++AN +
Sbjct: 59 IRNEALITEILHDHAIDTVIHFAGLKAVGESVARPLEYYDNNVNGTLRLVSAMRAANVK- 117
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIY-GLSITGLRF 269
+++++SS++VYG +P+ E+ T P S Y +K E+I SI LR+
Sbjct: 118 NLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIALLRY 177
Query: 270 FTVYG----------PWGRPD--MAYFSFTRNILQGKPITVYRGKNHVDLA---RDFTYI 314
F G P G P+ M Y + + + + + V+ + RD+ ++
Sbjct: 178 FNPVGAHPSGDMGEDPQGIPNNLMPYIAQVA-VGRRESLAVFGNDYPTEDGTGVRDYIHV 236
Query: 315 DDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGD 374
D+ G + +++ A + I+NLG +V +VN + K +GD
Sbjct: 237 MDLADGHVVAMEKLADKSGVHIYNLGAGVGSSVLDVVNAFSKACG-KPINYHFAPRRDGD 295
Query: 375 VPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
+P A+ S A +E +R T L + W
Sbjct: 296 LPAYWADASKADRELNWRVTRTLDEMAQDTWHW 328
>sp|P0C7J0|RMLB_XANCP dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=rfbB PE=3 SV=1
Length = 351
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 150/344 (43%), Gaps = 32/344 (9%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIND 153
LVTG AGF+G + L RG VV LD Y +L N +FV +GDI D
Sbjct: 5 LVTGRAGFIGGNFVLEAVSRGIRVVNLDALT--YAGNLNTLASLEGNADHIFV-KGDIGD 61
Query: 154 AKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKS---ANPQP 210
L+ +L V++ AA++ V +++ P +++ +N+ G + LLEA + A P
Sbjct: 62 GALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDT 121
Query: 211 S-----IVWASSSSVYG-LNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSI 264
+ S+ VYG L E F+E P S Y+A+K A + + ++H YGL +
Sbjct: 122 RRDAFRFLHVSTDEVYGTLGETGKFTETTPY-APNSPYSASKAASDHLVRAFHHTYGLPV 180
Query: 265 TGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGS 324
YGP+ P+ L G+P+ VY V RD+ ++ D C
Sbjct: 181 LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQV---RDWLFVSD---HCEAI 234
Query: 325 LDTSAGPAPYRIFNLGNTSP----VTVPKLVNILERHLKVKAKKN-------VIEMPGNG 373
A +N+G S V + +L++H + K V + PG+
Sbjct: 235 RTVLAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGH- 293
Query: 374 DVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYYGYNRG 417
D + + S + E G+ P + G+ + V WYL+ + +G
Sbjct: 294 DRRYA-IDASKLKDELGWEPAYTFEQGIAQTVDWYLTNQTWVQG 336
>sp|B0RVL0|RMLB_XANCB dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv.
campestris (strain B100) GN=rfbB PE=3 SV=1
Length = 351
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 149/344 (43%), Gaps = 32/344 (9%)
Query: 94 LVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGDIND 153
LVTG AGF+G + L RG VV LD Y +L N +FV +GDI D
Sbjct: 5 LVTGGAGFIGGNFVLEAVSRGIRVVNLDALT--YAGNLNTLASLEGNADHIFV-KGDIGD 61
Query: 154 AKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKS---ANPQP 210
L+ +L V++ AA++ V +++ P +++ +N+ G + LLEA + A P
Sbjct: 62 GALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDT 121
Query: 211 S-----IVWASSSSVYG-LNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSI 264
+ S+ VYG L E F+E P S Y+A+K A + + ++H YGL +
Sbjct: 122 RRDAFRFLHVSTDEVYGTLGETGKFTETTPY-APNSPYSASKAASDHLVRAFHHTYGLPV 180
Query: 265 TGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGS 324
YGP+ P+ L G+P+ VY V RD+ ++ D C
Sbjct: 181 LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQV---RDWLFVSD---HCEAI 234
Query: 325 LDTSAGPAPYRIFNLGNTSP----VTVPKLVNILERHLKVKAKKN-------VIEMPGNG 373
A +N+G S V + +L++H + K V + PG+
Sbjct: 235 RTVLAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGH- 293
Query: 374 DVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYYGYNRG 417
D + + S + E G+ P + G+ V WYL+ + +G
Sbjct: 294 DRRYA-IDASKLKDELGWEPAYTFEQGIALTVDWYLTNQTWVQG 336
>sp|Q9SN58|GALE2_ARATH UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana GN=At4g10960 PE=2
SV=3
Length = 351
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 166/362 (45%), Gaps = 49/362 (13%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHG--VFVIEG 149
+VLV+G AG++G+H L L G VV +DN +N SL++ +K L HG + +
Sbjct: 5 NVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKK-LAAEHGERLSFHQV 63
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
D+ D L K+F F V+H A V +++ P Y ++N+ G +TLLE +
Sbjct: 64 DLRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCK 123
Query: 210 PSIVWASSSSVYGLNENVPFSEADRTDQPASL---YAATKKAGEEIAHTYNHIYG----L 262
++V++SS++VYG + VP +E + P S Y TK EEI +YG
Sbjct: 124 -NLVFSSSATVYGSPKEVPCTE----EFPISALNPYGRTKLFIEEICRD---VYGSDPEW 175
Query: 263 SITGLRFFTVYG----------PWGRPDMAYFSFTRNILQGKP--ITV----YRGKNHVD 306
I LR+F G P G P+ F + + G+ +TV Y K+
Sbjct: 176 KIILLRYFNPVGAHPSGDIGEDPRGIPN-NLMPFVQQVAVGRRPHLTVFGNDYNTKDGTG 234
Query: 307 LARDFTYIDDIVKGCLGSL----DTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKA 362
+ RD+ ++ D+ G + +L D G ++NLG + +V ++V+ E K
Sbjct: 235 V-RDYIHVIDLADGHIAALRKLEDCKIG---CEVYNLGTGNGTSVLEMVDAFE---KASG 287
Query: 363 KKNVIEMPGN--GDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSY-YGYNRGKR 419
KK + + G GD +A+ A+ E ++ ++ + W + YGY+
Sbjct: 288 KKIPLVIAGRRPGDAEVVYASTERAESELNWKAKYGIEEMCRDLWNWASNNPYGYDSSSE 347
Query: 420 VN 421
N
Sbjct: 348 DN 349
>sp|P44914|RMLB_HAEIN dTDP-glucose 4,6-dehydratase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=rffG PE=3 SV=1
Length = 338
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 152/342 (44%), Gaps = 34/342 (9%)
Query: 91 MSVLVTGAAGFVGTH-VSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
M++LVTG +GF+G+ + + D V+ +D + S A + + NN +
Sbjct: 2 MNILVTGGSGFIGSALIRYIINHTQDFVINIDKLTYAANQS---ALREVENNPRYVFEKV 58
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACK----S 205
DI D ++ +F+ VMHLAA++ V ++ +V +NI G TLLE K +
Sbjct: 59 DICDLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWHT 118
Query: 206 ANPQPSIVW----ASSSSVYGLNENVPFSEADRTDQ----PASLYAATKKAGEEIAHTYN 257
+ + S+ VYG ++ SE T+Q P+S Y+A+K A + ++
Sbjct: 119 LDEAKKTTFRFHHISTDEVYG---DLSLSEPAFTEQSPYHPSSPYSASKAASNHLVQAWH 175
Query: 258 HIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDI 317
YGL + YG + + N + GKP+ +Y + RD+ +++D
Sbjct: 176 RTYGLPVIITNSSNNYGAYQHAEKLIPLMISNAVMGKPLPIYGDGQQI---RDWLFVEDH 232
Query: 318 VKGCLGSLDTSAGPAPYRI-FNLGNTSPVTVPKLVNILER-------HLKV--KAKKNVI 367
V+ L Y I N T+ V ++ +LE H+K V
Sbjct: 233 VQASYLVLTKGRVGENYNIGGNCEKTNLEVVKRICQLLEELAPSKPNHIKYYEDLMTFVK 292
Query: 368 EMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYL 409
+ PG+ DV ++ + S E G++P + GL++ V+WYL
Sbjct: 293 DRPGH-DVRYS-LDCSKIHAELGWQPQITFEQGLRQTVKWYL 332
>sp|Q9LH76|RHM3_ARATH Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana
GN=RHM3 PE=1 SV=1
Length = 664
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 143/325 (44%), Gaps = 21/325 (6%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGDG--VVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG 149
++L+TGAAGF+ +HV+ L + +V LD + Y +LK + + + FV +G
Sbjct: 8 NILITGAAGFIASHVANRLVRSYPDYKIVVLDKLD--YCSNLKNLNPSKSSPNFKFV-KG 64
Query: 150 DINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQ 209
DI A L+ L +MH AAQ V + N + +NI G LLEACK
Sbjct: 65 DIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQI 124
Query: 210 PSIVWASSSSVYGLNE---NVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITG 266
+ S+ VYG + +V EA + P + Y+ATK E + Y YGL +
Sbjct: 125 RRFIHVSTDEVYGETDEDASVGNHEASQL-LPTNPYSATKAGAEMLVMAYGRSYGLPVIT 183
Query: 267 LRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLD 326
R VYGP P+ F + GKP+ ++ ++V R + Y +D+ + L
Sbjct: 184 TRGNNVYGPNQFPEKLIPKFILLAMNGKPLPIHGDGSNV---RSYLYCEDVAEAFEVVL- 239
Query: 327 TSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANI---S 383
G + ++N+G T V + N + + + + + PF
Sbjct: 240 -HKGEVNH-VYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENR---PFNDQRYFLDD 294
Query: 384 SAQKEFGYRPTTDLQTGLKKFVRWY 408
K+ G+ T+ + GL+K + WY
Sbjct: 295 QKLKKLGWCERTNWEEGLRKTMEWY 319
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 9/125 (7%)
Query: 148 EGDINDAKLLAKLFDAVAFTHVMHLAAQAG---VRYAMQNPHSYVHSNIAGLVTLLEACK 204
+G + D L ++ +HV + A G V + + + N+AG +TL + C+
Sbjct: 410 KGRLEDRASLIADIRSIKPSHVFNAAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCR 469
Query: 205 SANPQPSIVWASS-----SSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHI 259
N + +A+ + + + F E D+ + S Y+ TK EE+ ++++
Sbjct: 470 E-NDLLMMNFATGCIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNV 528
Query: 260 YGLSI 264
L +
Sbjct: 529 CTLRV 533
>sp|Q43070|GALE1_PEA UDP-glucose 4-epimerase OS=Pisum sativum GN=GALE PE=2 SV=1
Length = 350
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 154/338 (45%), Gaps = 30/338 (8%)
Query: 93 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNN--HGVFVIEGD 150
+LVTG+AGF+GTH + L G V +DNF+N ++++ R+ + +N + GD
Sbjct: 8 ILVTGSAGFIGTHTVVQLLNNGFNVSIIDNFDNSVMEAVERVREVVGSNLSQNLEFTLGD 67
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
+ + L KLF F V+H A V +++NP Y +N+ G + L E N +
Sbjct: 68 LRNKDDLEKLFSKSKFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYEVMAKHNCK- 126
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIY-GLSITGLRF 269
+V++SS++VYG E +P E D Q + Y TK EEIA I LR+
Sbjct: 127 KMVFSSSATVYGQPEKIPCVE-DFKLQAMNPYGRTKLFLEEIARDIQKAEPEWRIVLLRY 185
Query: 270 FTVYG----------PWGRPDMAYFSFTRNILQGK--PITVYRGKNHV----DLARDFTY 313
F G P G P+ + + + G+ + VY G ++ RD+ +
Sbjct: 186 FNPVGAHESGKLGEDPRGIPN-NLMPYIQQVAVGRLPELNVY-GHDYPTRDGSAIRDYIH 243
Query: 314 IDDIVKGCLGSLDT--SAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPG 371
+ D+ G + +L ++ +NLG +V ++V E K KK +++
Sbjct: 244 VMDLADGHIAALRKLFTSENIGCTAYNLGTGRGSSVLEMVAAFE---KASGKKIALKLCP 300
Query: 372 N--GDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
GD +A+ + A+KE G++ ++ + W
Sbjct: 301 RRPGDATEVYASTAKAEKELGWKAKYGVEEMCRDQWNW 338
>sp|Q8H0B6|ARAE2_ORYSJ Probable UDP-arabinose 4-epimerase 2 OS=Oryza sativa subsp.
japonica GN=UEL-2 PE=2 SV=1
Length = 391
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 136/287 (47%), Gaps = 26/287 (9%)
Query: 86 HRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVF 145
H G VLVTG AG++G+H +L L + V +DN + +++ ++ +
Sbjct: 45 HEIGVTHVLVTGGAGYIGSHATLRLLRDNYRVTIVDNLSRGNMGAVRVLQRLFPEPGRLQ 104
Query: 146 VIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKS 205
I D+ DAK + K+F AF VMH AA A V + P Y H+ + +T+LEA +
Sbjct: 105 FIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLTVLEAMAA 164
Query: 206 ANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSIT 265
N + +++++S+ + YG + +P +EA P + Y KK E+I ++ +++
Sbjct: 165 YNVK-TLIYSSTCATYGEPDTMPITEA-TPQNPINPYGKAKKMAEDIILDFSKRSEMAVM 222
Query: 266 GLRFFTVYG--PWG------RPDM--------AYFSFTRNILQGKPITVYRGKNHV---- 305
LR+F V G P G RP++ A F I+ G + RG ++
Sbjct: 223 ILRYFNVIGSDPGGRLGEAPRPELREHGRISGACFDAALGIIPGLKV---RGTDYPTADG 279
Query: 306 DLARDFTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVN 352
RD+ + D+V + +LD A P I+N+G +V + V
Sbjct: 280 TCIRDYIDVTDLVDAHVKALD-KAQPGKVGIYNVGTGHGRSVKEFVE 325
>sp|P37777|RMLB_SHIFL dTDP-glucose 4,6-dehydratase OS=Shigella flexneri GN=rfbB PE=3 SV=2
Length = 361
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 150/345 (43%), Gaps = 34/345 (9%)
Query: 91 MSVLVTGAAGFVGTHV-SLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIE- 148
M +LVTG AGF+G+ V + D VV +D Y +L+ A +++ + E
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLT--YAGNLESL--ADVSDSERYAFEH 56
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACK---- 204
DI DA ++++F VMHLAA++ V ++ P +++ +NI G LLEA +
Sbjct: 57 ADICDAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWS 116
Query: 205 SANPQPSIVW----ASSSSVYGL---------NENVPFSEADRTDQPASLYAATKKAGEE 251
+ N + + S+ VYG NE +P P+S Y+A+K + +
Sbjct: 117 ALNDEKKKSFRFHHISTDEVYGDLPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDH 176
Query: 252 IAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDF 311
+ + YGL YGP+ P+ N L+GK + +Y GK D RD+
Sbjct: 177 LVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIY-GKG--DQIRDW 233
Query: 312 TYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKK------N 365
Y++D + + Y I + V + L + K K
Sbjct: 234 LYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITY 293
Query: 366 VIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLS 410
V + PG+ A+ S +E G++P ++G++K V WYL+
Sbjct: 294 VADRPGHDRRYAIDADKIS--RELGWKPQETFESGIRKTVEWYLA 336
>sp|Q9F7D4|GALE_YERPE UDP-glucose 4-epimerase OS=Yersinia pestis GN=galE PE=3 SV=1
Length = 338
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 147/333 (44%), Gaps = 21/333 (6%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M VLVTG +G++G+H + L + G V LDN N L AR L + + GD
Sbjct: 1 MYVLVTGGSGYIGSHTCVQLIEAGYKPVILDNLCNSKSSVL--ARIHSLTGYTPELYAGD 58
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I D LL +F A V+H A V ++ P Y ++N+ G + LLEA ++A +
Sbjct: 59 IRDRTLLDSIFAAHPIHAVIHFAGLKAVGESVNRPLEYYNNNVFGTLVLLEAMRAAQVK- 117
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHI-YGLSITGLRF 269
+++++SS++VYG +P+ E+ T P+S Y +K E+I ++T LR+
Sbjct: 118 NLIFSSSATVYGDQPQIPYVESFPTGSPSSPYGRSKLMVEQILQDVQLADPQWNMTILRY 177
Query: 270 FTVYG----------PWGRPDMAYFSFTRNILQGKPITVYRGKNHVDL-----ARDFTYI 314
F G P G P+ F + G+ ++ N RD+ ++
Sbjct: 178 FNPVGAHPSGLMGEDPQGIPN-NLMPFIAQVAVGRRESLAIFGNGYPTPDGTGVRDYIHV 236
Query: 315 DDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGD 374
D+ G + ++ T G IFNLG +V ++V + K GD
Sbjct: 237 VDLADGHVAAMKTLHGKPGVHIFNLGAGVGHSVLQVVAAFSKACG-KPLAYHFAPRREGD 295
Query: 375 VPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
+P A+ + A ++ G+R + L W
Sbjct: 296 LPAYWADATKAAEQLGWRVSRSLDEMAADTWHW 328
>sp|P37759|RMLB1_ECOLI dTDP-glucose 4,6-dehydratase 1 OS=Escherichia coli (strain K12)
GN=rfbB PE=3 SV=2
Length = 361
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 148/345 (42%), Gaps = 34/345 (9%)
Query: 91 MSVLVTGAAGFVGTHV-SLALKKRGDGVVGLDNFNNYYDPSLKKARKAL--LNNHGVFVI 147
M +LVTG AGF+G+ V + D VV +D + R++L +++ +V
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKL------TYAGNRESLADVSDSERYVF 54
Query: 148 E-GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKS- 205
E DI DA +A++F VMHLAA++ V ++ P +++ +NI G LLEA ++
Sbjct: 55 EHADICDAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNY 114
Query: 206 -----ANPQPSIVW--ASSSSVYGL---------NENVPFSEADRTDQPASLYAATKKAG 249
++ + S + S+ VYG E +P P+S Y+A+K +
Sbjct: 115 WSALDSDKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASS 174
Query: 250 EEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLAR 309
+ + + YGL YGP+ P+ N L+GK + +Y GK D R
Sbjct: 175 DHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIY-GKG--DQIR 231
Query: 310 DFTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEM 369
D+ Y++D + + Y I + V + L + K K ++
Sbjct: 232 DWLYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQI 291
Query: 370 PGNGDVPFTH----ANISSAQKEFGYRPTTDLQTGLKKFVRWYLS 410
D P + + G++P ++G++K V WYLS
Sbjct: 292 TYVADRPGHDRRYAIDAEKIGRALGWKPQETFESGIRKTVEWYLS 336
>sp|O65781|GALE2_CYATE UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetragonoloba PE=2 SV=1
Length = 350
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 145/321 (45%), Gaps = 26/321 (8%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEG-D 150
+VLVTG AG++G+H L L G V +DN +N + ++ + ++ G D
Sbjct: 5 TVLVTGGAGYIGSHTVLQLLLGGFKAVVVDNLDNSSETAIHRVKELAGKFAGNLSFHKLD 64
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
+ D L K+F + F V+H A V ++Q P Y +N+ G + L E +A+
Sbjct: 65 LRDRDALEKIFSSTKFDSVIHFAGLKAVGESVQKPLLYYDNNLIGTIVLFEVM-AAHGCK 123
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAH-TYNHIYGLSITGLRF 269
+V++SS++VYGL + VP +E + A+ Y TK EEI Y I LR+
Sbjct: 124 KLVFSSSATVYGLPKEVPCTE-EFPLSAANPYGRTKLIIEEICRDIYRAEQEWKIILLRY 182
Query: 270 FTVYG----------PWGRPDMAYFSFTRNILQG-KPITVYRGKNHVDL----ARDFTYI 314
F G P G P+ F + + G +P G ++ RD+ ++
Sbjct: 183 FNPVGAHPSGYIGEDPRGIPN-NLMPFVQQVAVGRRPALTVFGNDYTTSDGTGVRDYIHV 241
Query: 315 DDIVKGCLGSLDTSAGPA-PYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGN- 372
D+ G + +L P ++NLG +V ++V E + KK + M G
Sbjct: 242 VDLADGHIAALRKLNDPKIGCEVYNLGTGKGTSVLEMVKAFE---QASGKKIPLVMAGRR 298
Query: 373 -GDVPFTHANISSAQKEFGYR 392
GD +A+ + A++E ++
Sbjct: 299 PGDAEVVYASTNKAERELNWK 319
>sp|Q8H0B2|ARAE3_ORYSJ Probable UDP-arabinose 4-epimerase 3 OS=Oryza sativa subsp.
japonica GN=UEL-3 PE=2 SV=1
Length = 406
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 158/353 (44%), Gaps = 28/353 (7%)
Query: 86 HRSGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVF 145
H G VLVTG AG++G+H SL L K V +DN + ++K ++ +
Sbjct: 59 HEPGVTHVLVTGGAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELFPQPGRLQ 118
Query: 146 VIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKS 205
I D+ D K + K+F AF VMH AA A V + P Y H+ + + +LEA S
Sbjct: 119 FIYADLGDQKTVNKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMAS 178
Query: 206 ANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNH-IYGLSI 264
+ +++++S+ + YG E +P E R P + Y KK E+I + +++
Sbjct: 179 HGVK-TLIYSSTCATYGEPEKMPIVETTR-QLPINPYGKAKKMAEDIILDFTKGRKDMAV 236
Query: 265 TGLRFFTVYG--PWG------RPDM--------AYFSFTRNILQGKPI--TVYRGKNHVD 306
LR+F V G P G RP++ A F I+ G + T Y +
Sbjct: 237 MILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVKGTDYPTTDGTC 296
Query: 307 LARDFTYIDDIVKGCLGSLDTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNV 366
+ RD+ + D+V + +L+ A P+ I+N+G +V + V+ ++ V K
Sbjct: 297 I-RDYIDVTDLVDAHVKALN-KAEPSKVGIYNVGTGRGRSVKEFVDACKKATGVNIKIEY 354
Query: 367 IEMPGNGDVPFTHANISSAQKEFGYRPT-TDLQTGLKKFVRWYLSY---YGYN 415
+ GD +++ + E + TDL+ L RW S+ YG N
Sbjct: 355 LSRR-PGDYAEVYSDPTKINTELNWTAQYTDLKESLSVAWRWQKSHPRGYGSN 406
>sp|Q42605|GALE1_ARATH UDP-glucose 4-epimerase 1 OS=Arabidopsis thaliana GN=At1g12780 PE=1
SV=2
Length = 351
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 155/343 (45%), Gaps = 38/343 (11%)
Query: 92 SVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKAL---LNNHGVFVIE 148
++LVTG AGF+GTH + L K G V +DNF+N ++ + R+ + L+ F +
Sbjct: 8 NILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNL- 66
Query: 149 GDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANP 208
GD+ + + KLF F V+H A V +++NP Y +N+ G + L E N
Sbjct: 67 GDLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYNC 126
Query: 209 QPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIY-GLSITGL 267
+ +V++SS++VYG E +P E D + + Y TK EEIA I L
Sbjct: 127 K-MMVFSSSATVYGQPEKIPCME-DFELKAMNPYGRTKLFLEEIARDIQKAEPEWRIILL 184
Query: 268 RFFTVYG----------PWGRPDMAYFSFTRNILQGK--PITVYRGKNHV----DLARDF 311
R+F G P G P+ + + + G+ + VY G ++ RD+
Sbjct: 185 RYFNPVGAHESGSIGEDPKGIPN-NLMPYIQQVAVGRLPELNVY-GHDYPTEDGSAVRDY 242
Query: 312 TYIDDIVKGCLGSL-----DTSAGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNV 366
++ D+ G + +L D G Y NLG +V ++V E K KK
Sbjct: 243 IHVMDLADGHIAALRKLFADPKIGCTAY---NLGTGQGTSVLEMVAAFE---KASGKKIP 296
Query: 367 IEMPG--NGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 407
I++ +GD +A+ A+KE G++ + + +W
Sbjct: 297 IKLCPRRSGDATAVYASTEKAEKELGWKAKYGVDEMCRDQWKW 339
>sp|O84903|GALE_LACCA UDP-glucose 4-epimerase OS=Lactobacillus casei GN=galE PE=3 SV=1
Length = 331
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 95/184 (51%), Gaps = 11/184 (5%)
Query: 91 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGVFVIEGD 150
M++ V G AG++G+H L G+ VV LDN + RKA+ + +GD
Sbjct: 1 MTIAVLGGAGYIGSHTVKQLLAAGEDVVVLDNL-------ITGHRKAVDPRARFY--QGD 51
Query: 151 INDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQP 210
I D L+++F ++H AA + V +M++P Y +N G++TLLEA +
Sbjct: 52 IRDYHFLSQVFSQEKIDGIVHFAAFSIVPESMKDPLKYFDNNTGGMITLLEAMNQFGIK- 110
Query: 211 SIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFF 270
IV++S+++ YG + VP E D P + Y +K A E+I H + YGL LR+F
Sbjct: 111 KIVFSSTAATYGEPKQVPIKETD-PQVPTNPYGESKLAMEKIMHWADVAYGLKFVALRYF 169
Query: 271 TVYG 274
V G
Sbjct: 170 NVAG 173
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 161,999,599
Number of Sequences: 539616
Number of extensions: 6807545
Number of successful extensions: 17929
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 323
Number of HSP's that attempted gapping in prelim test: 17195
Number of HSP's gapped (non-prelim): 590
length of query: 421
length of database: 191,569,459
effective HSP length: 120
effective length of query: 301
effective length of database: 126,815,539
effective search space: 38171477239
effective search space used: 38171477239
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)