Your job contains 1 sequence.
>043172
MSLISQNAVSRNRLKTKTEDGEGPLAVEENKDVEDGKESDLETSRAKKRKREKEKRSEME
QVKEMKKLENILFGSLYAPVEFGKEDEEKVQPEAETGSAVYFVDPSANSMLSVNEEDAQF
SGESDDEEEAWQKKPVWVDEEEEQTNVNIAKVNRLRKLRKEEDESLISGAEYVSRLRAQH
VKLNPGTEWAQLDSRSRDNDPYDESSDEETQAVVACGYEDTEAVDDILRTDEDLVVKSSA
KLSPGLLEYSRLIDANADESSTGPINSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQ
SIFLEDCPVRKASFLPDGSQAIIAGRRKFFYSLDLVKAKADKIGPLVGREEKSLEFFEVS
PDSSVIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWD
LRTRTCIHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQEFLGGKRKPIKTIEN
LTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSNWPPANRNLQYPRCLDFSPG
GGFMAVGNAAGKVFLYKLNHYHHA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043172
(564 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2174698 - symbol:AT5G14050 "AT5G14050" species... 1739 3.9e-179 1
UNIPROTKB|Q9Y5J1 - symbol:UTP18 "U3 small nucleolar RNA-a... 788 2.3e-78 1
UNIPROTKB|F1RSH4 - symbol:UTP18 "Uncharacterized protein"... 785 4.8e-78 1
RGD|1309957 - symbol:Utp18 "UTP18, small subunit (SSU) pr... 784 6.2e-78 1
UNIPROTKB|A6H702 - symbol:UTP18 "Uncharacterized protein"... 781 1.3e-77 1
UNIPROTKB|E2RBW9 - symbol:UTP18 "Uncharacterized protein"... 766 5.0e-76 1
MGI|MGI:1923402 - symbol:Utp18 "UTP18, small subunit (SSU... 765 6.3e-76 1
ZFIN|ZDB-GENE-060929-668 - symbol:utp18 "UTP18 small subu... 758 3.5e-75 1
POMBASE|SPBC29A3.06 - symbol:SPBC29A3.06 "CGI-48 family (... 720 3.7e-71 1
SGD|S000003605 - symbol:UTP18 "Possible U3 snoRNP protein... 333 2.9e-53 3
FB|FBgn0262560 - symbol:wcd "wicked" species:7227 "Drosop... 488 4.2e-49 2
ASPGD|ASPL0000066107 - symbol:AN7458 species:162425 "Emer... 371 3.2e-47 2
UNIPROTKB|E1C7Z0 - symbol:UTP18 "Uncharacterized protein"... 465 3.9e-44 1
CGD|CAL0003002 - symbol:UTP18 species:5476 "Candida albic... 458 2.2e-43 1
UNIPROTKB|Q5A0E1 - symbol:CaO19.7154 "Putative uncharacte... 458 2.2e-43 1
WB|WBGene00015104 - symbol:B0280.9 species:6239 "Caenorha... 432 1.2e-40 1
DICTYBASE|DDB_G0271240 - symbol:utp18 "U3 snoRNP protein"... 251 2.1e-18 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 162 6.3e-09 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 169 9.8e-09 1
UNIPROTKB|F1NFT8 - symbol:WDR61 "WD repeat-containing pro... 143 6.1e-07 1
UNIPROTKB|Q5ZJH5 - symbol:WDR61 "WD repeat-containing pro... 143 6.1e-07 1
UNIPROTKB|Q6PBD6 - symbol:wdr61 "WD repeat-containing pro... 139 1.7e-06 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 138 4.7e-06 1
CGD|CAL0005939 - symbol:TUP1 species:5476 "Candida albica... 139 4.8e-06 1
UNIPROTKB|P0CY34 - symbol:TUP1 "Transcriptional repressor... 139 4.8e-06 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 138 5.5e-06 1
WB|WBGene00016374 - symbol:swd-2.2 species:6239 "Caenorha... 135 5.7e-06 1
MGI|MGI:1917493 - symbol:Wdr61 "WD repeat domain 61" spec... 133 8.1e-06 1
UNIPROTKB|F1RKU4 - symbol:WDR61 "Uncharacterized protein"... 132 9.1e-06 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 136 9.1e-06 1
UNIPROTKB|H0YN81 - symbol:WDR61 "WD repeat-containing pro... 132 9.7e-06 1
UNIPROTKB|E2RBV0 - symbol:WDR61 "Uncharacterized protein"... 132 1.1e-05 1
UNIPROTKB|Q32LN7 - symbol:WDR61 "WD repeat-containing pro... 132 1.1e-05 1
UNIPROTKB|Q9GZS3 - symbol:WDR61 "WD repeat-containing pro... 132 1.1e-05 1
ZFIN|ZDB-GENE-040426-1851 - symbol:wdr61 "WD repeat domai... 132 1.1e-05 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 135 1.2e-05 1
FB|FBgn0039867 - symbol:CstF-50 "CstF-50" species:7227 "D... 134 1.2e-05 1
RGD|1308228 - symbol:Wdr61 "WD repeat domain 61" species:... 131 1.4e-05 1
FB|FBgn0027524 - symbol:CG3909 species:7227 "Drosophila m... 131 1.6e-05 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 133 1.8e-05 1
UNIPROTKB|Q6GMD2 - symbol:wdr61 "WD repeat-containing pro... 129 2.3e-05 1
RGD|1310631 - symbol:Atg16l1 "autophagy related 16-like 1... 91 4.0e-05 2
UNIPROTKB|B4GMG4 - symbol:GL12389 "WD repeat-containing p... 124 4.1e-05 2
UNIPROTKB|P73594 - symbol:slr1409 "Uncharacterized WD rep... 127 4.4e-05 1
SGD|S000004951 - symbol:LST8 "Protein required for the tr... 125 6.3e-05 1
UNIPROTKB|Q96J01 - symbol:THOC3 "THO complex subunit 3" s... 122 6.9e-05 2
MGI|MGI:2686209 - symbol:Wdr65 "WD repeat domain 65" spec... 133 7.0e-05 1
UNIPROTKB|H3BN58 - symbol:MLST8 "Target of rapamycin comp... 118 8.7e-05 2
UNIPROTKB|Q5ZMV7 - symbol:WDR82 "WD repeat-containing pro... 124 8.7e-05 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 130 0.00011 2
TAIR|locus:2202129 - symbol:AT1G11160 "AT1G11160" species... 130 0.00012 1
UNIPROTKB|E7EP32 - symbol:GNB2 "Guanine nucleotide-bindin... 122 0.00013 1
DICTYBASE|DDB_G0276031 - symbol:DDB_G0276031 "WD40 repeat... 125 0.00015 1
UNIPROTKB|P11017 - symbol:GNB2 "Guanine nucleotide-bindin... 122 0.00017 1
UNIPROTKB|E2RD95 - symbol:GNB2 "Uncharacterized protein" ... 122 0.00017 1
UNIPROTKB|P62879 - symbol:GNB2 "Guanine nucleotide-bindin... 122 0.00017 1
MGI|MGI:95784 - symbol:Gnb2 "guanine nucleotide binding p... 122 0.00017 1
RGD|69319 - symbol:Gnb2 "guanine nucleotide binding prote... 122 0.00017 1
RGD|1359599 - symbol:Wsb2 "WD repeat and SOCS box-contain... 123 0.00018 1
UNIPROTKB|C9JXA5 - symbol:GNB2 "Guanine nucleotide-bindin... 119 0.00019 1
UNIPROTKB|B4N984 - symbol:GK12179 "WD repeat-containing p... 116 0.00019 2
UNIPROTKB|Q9W7F2 - symbol:wdr1-a "WD repeat-containing pr... 110 0.00021 2
UNIPROTKB|F1NUQ0 - symbol:THOC3 "Uncharacterized protein"... 122 0.00021 1
DICTYBASE|DDB_G0292592 - symbol:lst8 "WD40 repeat-contain... 120 0.00023 1
UNIPROTKB|J9PAK6 - symbol:TBL3 "Uncharacterized protein" ... 121 0.00023 1
FB|FBgn0025457 - symbol:Bub3 "Bub3" species:7227 "Drosoph... 95 0.00024 2
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 120 0.00026 1
UNIPROTKB|Q29RH4 - symbol:THOC3 "THO complex subunit 3" s... 122 0.00028 2
UNIPROTKB|E2RC43 - symbol:THOC3 "Uncharacterized protein"... 122 0.00028 2
UNIPROTKB|F1S386 - symbol:THOC3 "Uncharacterized protein"... 122 0.00028 2
MGI|MGI:1920916 - symbol:Thoc3 "THO complex 3" species:10... 122 0.00028 2
RGD|1311669 - symbol:Thoc3 "THO complex 3" species:10116 ... 122 0.00028 2
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 120 0.00030 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 122 0.00031 1
FB|FBgn0037569 - symbol:tex "tex" species:7227 "Drosophil... 119 0.00033 1
UNIPROTKB|Q294Y7 - symbol:GA13204 "WD repeat-containing p... 124 0.00034 2
UNIPROTKB|E1BRZ6 - symbol:TWF2 "Twinfilin-2" species:9031... 123 0.00034 1
CGD|CAL0001281 - symbol:orf19.1095 species:5476 "Candida ... 120 0.00036 1
UNIPROTKB|Q59QW3 - symbol:GLE2 "Likely WD40 repeat nuclea... 120 0.00036 1
WB|WBGene00000773 - symbol:cpf-1 species:6239 "Caenorhabd... 120 0.00044 1
UNIPROTKB|Q9KV05 - symbol:VC_0353 "Putative uncharacteriz... 118 0.00045 1
TIGR_CMR|VC_0353 - symbol:VC_0353 "lipoprotein, putative"... 118 0.00045 1
UNIPROTKB|P74598 - symbol:sll1491 "Uncharacterized WD rep... 118 0.00051 1
MGI|MGI:2144041 - symbol:Wsb2 "WD repeat and SOCS box-con... 119 0.00051 1
ZFIN|ZDB-GENE-030131-333 - symbol:wdr82 "WD repeat domain... 121 0.00056 1
TAIR|locus:2173542 - symbol:AT5G60940 "AT5G60940" species... 119 0.00056 1
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 120 0.00062 1
UNIPROTKB|E2RGF2 - symbol:WDR82 "Uncharacterized protein"... 116 0.00068 1
UNIPROTKB|Q6UXN9 - symbol:WDR82 "WD repeat-containing pro... 116 0.00068 1
UNIPROTKB|F2Z5U3 - symbol:WDR82 "Uncharacterized protein"... 116 0.00068 1
MGI|MGI:1924555 - symbol:Wdr82 "WD repeat domain containi... 116 0.00068 1
ZFIN|ZDB-GENE-040808-14 - symbol:thoc3 "THO complex 3" sp... 117 0.00074 2
DICTYBASE|DDB_G0289501 - symbol:cdc40 "putative RNA splic... 112 0.00080 2
>TAIR|locus:2174698 [details] [associations]
symbol:AT5G14050 "AT5G14050" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0006164 "purine nucleotide
biosynthetic process" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:AB007650 GO:GO:0006364
GO:GO:0080008 EMBL:AY075678 EMBL:AY133634 IPI:IPI00529631
RefSeq:NP_196909.1 UniGene:At.31984 ProteinModelPortal:Q9FMU5
SMR:Q9FMU5 IntAct:Q9FMU5 STRING:Q9FMU5 PaxDb:Q9FMU5 PRIDE:Q9FMU5
EnsemblPlants:AT5G14050.1 GeneID:831254 KEGG:ath:AT5G14050
GeneFarm:3315 TAIR:At5g14050 HOGENOM:HOG000242429 InParanoid:Q9FMU5
KO:K14553 OMA:SQFEKIY PhylomeDB:Q9FMU5 ProtClustDB:CLSN2687196
Genevestigator:Q9FMU5 GermOnline:AT5G14050 Uniprot:Q9FMU5
Length = 546
Score = 1739 (617.2 bits), Expect = 3.9e-179, P = 3.9e-179
Identities = 357/565 (63%), Positives = 429/565 (75%)
Query: 8 AVSRNRLKTK-TEDGEGPLAVEENKDVED-GKESDLETSXXXXXXXXXXXXXXXXQVKEM 65
++S+N K+K + E E+ +D E+ G + DL T ++ EM
Sbjct: 2 SLSQNAPKSKGIKREELKKQYEDVEDEEEIGSDDDL-TRGKRRKTEKEKQKLEESELVEM 60
Query: 66 KKLENILFGSLYAPVEFGKEDEEKVQPEAETGSAVYFVDPSANSMLSVNEEDAQFSGESD 125
KKLEN++FGSLY+PV FGKE+EE GSA++ VD SA + E+D E
Sbjct: 61 KKLENLIFGSLYSPVTFGKEEEED-------GSALFHVDRSAVRQIPDYEDDGDDDEELS 113
Query: 126 DEEE----AWQK-KPVWVDEEEEQTNVNIAKVNRLRKLRKEEDESLISGAEYVSRLRAQH 180
DEE A +K + W DEEE+Q NV+IA VNRLRKLRKEE+E LISG+EY++RLRA H
Sbjct: 114 DEENGQVVAIRKGEAAWEDEEEKQINVDIASVNRLRKLRKEENEGLISGSEYIARLRAHH 173
Query: 181 VKLNPGTEWAQLDSRSRDNDPYDESSDEETQAVVACGYEDTEAVDDILRTDEDLVVKSSA 240
KLNPGT+WA+ DS+ D + S D++TQ G VDDILRT+EDLVVKS
Sbjct: 174 AKLNPGTDWARPDSQIVDGE---SSDDDDTQD----G-----GVDDILRTNEDLVVKSRG 221
Query: 241 -KLSPGLLEYSRLIDANADESSTGPINSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKI 299
KL G LEYS+L+DANA + S GPINSV FH+NAQLLL AGLDRRLRFFQIDGKRNTKI
Sbjct: 222 NKLCAGRLEYSKLVDANAADPSNGPINSVHFHQNAQLLLTAGLDRRLRFFQIDGKRNTKI 281
Query: 300 QSIFLEDCPVRKASFLPDGSQAIIAGRRKFFYSLDLVKAKADKIGPLVGREEKSLEFFEV 359
QSIFLEDCP+RKA+FLP+GSQ I++GRRKFFYS DL KAK DKIGPLVGREEKSLE+FEV
Sbjct: 282 QSIFLEDCPIRKAAFLPNGSQVIVSGRRKFFYSFDLEKAKFDKIGPLVGREEKSLEYFEV 341
Query: 360 SPDSSVIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHW 419
S DS+ IAFVGNEGYILLVS+KTKELIGTLKMNG+VRSLAF++DGK LLSSGGDGQVY W
Sbjct: 342 SQDSNTIAFVGNEGYILLVSTKTKELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVW 401
Query: 420 DLRTRTCIHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQEFLGGKRKPIKTIE 479
DLRT C+++ VDEG GT+LC+S +G FA+G+D GIVN+Y + EF+GGKRKPIKT++
Sbjct: 402 DLRTMKCLYKGVDEGSTCGTSLCSSLNGALFASGTDRGIVNIYKKSEFVGGKRKPIKTVD 461
Query: 480 NLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSNWPPANRNLQYPRCLDFSP 539
NLT+K+DFMKFN+DAQILAI STM KNS+KL+H+PS VFSNWPP N + YPRCLDFSP
Sbjct: 462 NLTSKIDFMKFNHDAQILAIVSTMNKNSVKLVHVPSLTVFSNWPPPNSTMHYPRCLDFSP 521
Query: 540 GGGFMAVGNAAGKVFLYKLNHYHHA 564
G GFMA+GNAAGKV LYKL+HY +A
Sbjct: 522 GSGFMAMGNAAGKVLLYKLHHYQNA 546
>UNIPROTKB|Q9Y5J1 [details] [associations]
symbol:UTP18 "U3 small nucleolar RNA-associated protein 18
homolog" species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR024977 Pfam:PF12894 GO:GO:0006364 HOGENOM:HOG000242429
KO:K14553 OMA:FPPQKKP EMBL:AF151806 EMBL:BC025276 EMBL:AY007138
IPI:IPI01015840 RefSeq:NP_057085.2 UniGene:Hs.709327
ProteinModelPortal:Q9Y5J1 SMR:Q9Y5J1 IntAct:Q9Y5J1 STRING:Q9Y5J1
PhosphoSite:Q9Y5J1 DMDM:73920973 SWISS-2DPAGE:Q9Y5J1 PaxDb:Q9Y5J1
PRIDE:Q9Y5J1 Ensembl:ENST00000225298 GeneID:51096 KEGG:hsa:51096
UCSC:uc002its.3 CTD:51096 GeneCards:GC17P049337 HGNC:HGNC:24274
HPA:HPA052378 MIM:612816 neXtProt:NX_Q9Y5J1 PharmGKB:PA134984104
HOVERGEN:HBG082494 InParanoid:Q9Y5J1 OrthoDB:EOG4DV5MJ
ChiTaRS:UTP18 GenomeRNAi:51096 NextBio:53793 PMAP-CutDB:Q9Y5J1
ArrayExpress:Q9Y5J1 Bgee:Q9Y5J1 CleanEx:HS_UTP18
Genevestigator:Q9Y5J1 GermOnline:ENSG00000011260 Uniprot:Q9Y5J1
Length = 556
Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
Identities = 177/455 (38%), Positives = 261/455 (57%)
Query: 116 EDAQFSGESDDEEEAW-----QKKPVWVDEEEEQTNVNIAKVNRLRK-LRKEEDESLISG 169
++ + SG+S+ E EA QKKPVWVDEE+E + NR RK + K ES +S
Sbjct: 116 QEHEDSGDSEVENEAKGNFPPQKKPVWVDEEDEDEEMVDMMNNRFRKDMMKNASESKLSK 175
Query: 170 AEYVSRLRAQHVKLNPGTEWAQLDSRSRDNDPYDESSDEETQAVVACGYEDTEAVDDILR 229
RL+ + G A ++ R DES ++E DD+L+
Sbjct: 176 DNLKKRLKEEFQHAMGGVP-AWAETTKRKTSSDDESEEDE---------------DDLLQ 219
Query: 230 TDEDLVVKSSAKLSPGLLEYSRLIDANADESSTGPINSVQFHRNAQLLLVAGLDRRLRFF 289
+ + +S L G+L+ ANA+ + I+SVQFH AQ+++VAGLD + F
Sbjct: 220 RTGNFI-STSTSLPRGILKMKNCQHANAERPTVARISSVQFHPGAQIVMVAGLDNAVSLF 278
Query: 290 QIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIAGRR-KFFYSLDLVKAKADKIGPLVG 348
Q+DGK N KIQSI+LE P+ KA F +G + + K Y D++ K + + G
Sbjct: 279 QVDGKTNPKIQSIYLERFPIFKACFSANGEEVLATSTHSKVLYVYDMLAGKLIPVHQVRG 338
Query: 349 REEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGKQLL 408
+EK + FEVSPD S + G GY+ L++ KTKELIG++K+NG V + F+ D K++
Sbjct: 339 LKEKIVRSFEVSPDGSFLLINGIAGYLHLLAMKTKELIGSMKINGRVAASTFSSDSKKVY 398
Query: 409 SSGGDGQVYHWDLRTRTCIHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQEFL 468
+S GDG+VY WD+ +R C++R VDEG + G ++ TS +G + A GS+ G+VN+YN+ L
Sbjct: 399 ASSGDGEVYVWDVNSRKCLNRFVDEGSLYGLSIATSRNGQYVACGSNCGVVNIYNQDSCL 458
Query: 469 GGKR-KPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSNWPPA-N 526
KPIK I NL T V + FN +ILAI S K +++L+H+PS VFSN+P N
Sbjct: 459 QETNPKPIKAIMNLVTGVTSLTFNPTTEILAIASEKMKEAVRLVHLPSCTVFSNFPVIKN 518
Query: 527 RNLQYPRCLDFSPGGGFMAVGNAAGKVFLYKLNHY 561
+N+ + +DFSP G+ A+GN GK +Y+L+HY
Sbjct: 519 KNISHVHTMDFSPRSGYFALGNEKGKALMYRLHHY 553
>UNIPROTKB|F1RSH4 [details] [associations]
symbol:UTP18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR024977 Pfam:PF12894 GeneTree:ENSGT00440000033919
OMA:FPPQKKP EMBL:FP085452 Ensembl:ENSSSCT00000019154 Uniprot:F1RSH4
Length = 555
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 176/450 (39%), Positives = 259/450 (57%)
Query: 121 SGESDDEEEAW-----QKKPVWVDEEEEQTNVNIAKVNRLRK-LRKEEDESLISGAEYVS 174
SG+S+ E EA QKKPVW+DEE+E + NR RK + K ES +S E
Sbjct: 120 SGDSEVENEAKDNFPPQKKPVWLDEEDEDEEMVDMMNNRFRKDMMKNASESKLSKDELQK 179
Query: 175 RLRAQHVKLNPGTEWAQLDSRSRDNDPYDESSDEETQAVVACGYEDTEAVDDILRTDEDL 234
RL+ + G A ++ R DES ++E DD+L+ +
Sbjct: 180 RLKEEFQHAMGGVP-AWAETSRRKTSSDDESEEDE---------------DDLLQRTGNF 223
Query: 235 VVKSSAKLSPGLLEYSRLIDANADESSTGPINSVQFHRNAQLLLVAGLDRRLRFFQIDGK 294
+ S++ L G+L+ ANA+ +T I+SVQFH AQ+++VAGLD + FQ+DGK
Sbjct: 224 IATSTS-LPKGILKMKNCQHANAERPTTAEISSVQFHPRAQVVMVAGLDNAISLFQVDGK 282
Query: 295 RNTKIQSIFLEDCPVRKASFLPDGSQAIIAGRR-KFFYSLDLVKAKADKIGPLVGREEKS 353
N KIQSI+LE P+ KA F +G + + + Y D++ K + + G +EK
Sbjct: 283 TNPKIQSIYLEKFPIFKARFSANGEEVLATSTHSRVLYVYDMLAGKLIPVHQVRGLKEKI 342
Query: 354 LEFFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGKQLLSSGGD 413
+ FEVSPD S + G GY+ L+S KTKELIG++K+NG + + F D K++ +S D
Sbjct: 343 VRRFEVSPDGSFLLINGVAGYLHLLSMKTKELIGSMKINGRIAASTFTSDSKKVYASSAD 402
Query: 414 GQVYHWDLRTRTCIHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQEFLGGKR- 472
G+VY WD+ +R C++R VDEG + G ++ TS +G + A GS+ G+VN+YN++ L
Sbjct: 403 GEVYVWDVNSRKCLNRFVDEGSLYGLSIATSRNGQYVACGSNCGVVNIYNQESCLQETNP 462
Query: 473 KPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSNWPPANR-NLQY 531
KPIK I NL T V + FN +ILAI S K +++L+H+PS VFSN+P A + N+
Sbjct: 463 KPIKAIMNLVTGVTSLTFNPTTEILAIASDKMKEAVRLVHLPSCTVFSNFPVAKKKNISL 522
Query: 532 PRCLDFSPGGGFMAVGNAAGKVFLYKLNHY 561
+DFSP G+ A+GN GK +Y+L+HY
Sbjct: 523 VHTMDFSPRSGYFALGNEKGKALMYRLHHY 552
>RGD|1309957 [details] [associations]
symbol:Utp18 "UTP18, small subunit (SSU) processome component,
homolog (yeast)" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1309957 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR024977 Pfam:PF12894
KO:K14553 GeneTree:ENSGT00440000033919 OMA:FPPQKKP CTD:51096
OrthoDB:EOG4DV5MJ IPI:IPI00914191 RefSeq:NP_001128511.1
UniGene:Rn.219491 UniGene:Rn.52378 ProteinModelPortal:D3ZNH2
Ensembl:ENSRNOT00000003582 GeneID:303456 KEGG:rno:303456
NextBio:651365 Uniprot:D3ZNH2
Length = 546
Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
Identities = 175/461 (37%), Positives = 268/461 (58%)
Query: 106 SANSMLSVNEEDAQFSGESDDEEEAWQKKPVWVDEEEEQTNVNIAKVNRLRK-LRKEEDE 164
S+ L + +D++ E+ D QKKPVWVDE++E + NR RK + K E
Sbjct: 102 SSRGHLHGSSDDSEVEDEAVDNLS--QKKPVWVDEDDEDEEIVDMMNNRFRKDMMKNASE 159
Query: 165 SLISGAEYVSRLRAQHVKLNPGT-EWAQLDSRSRDNDPYDESSDEETQAVVACGYEDTEA 223
S +S + RL+ + G +WA+ S+ + SSD+E++ ED
Sbjct: 160 SKLSKDKLQKRLKEEFQHAMGGVPDWAEPGSKRKT------SSDDESE-------EDE-- 204
Query: 224 VDDILRTDEDLVVKSSAKLSPGLLEYSRLIDANADESSTGPINSVQFHRNAQLLLVAGLD 283
DD+L+ + + +S L G+L+ ANA+ +T I+SVQFH AQ+++V+G+D
Sbjct: 205 -DDLLQRTGNFI-STSTSLPRGILKMKNCRPANAERPTTARISSVQFHPGAQVVMVSGVD 262
Query: 284 RRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIAGRR-KFFYSLDLVKAKADK 342
+ FQ+DGK N KIQSI+LE P+ KA F +G + + K Y D++ K
Sbjct: 263 HAISLFQVDGKTNPKIQSIYLEKFPIFKACFSANGEEVLATSMHSKVIYVYDMIAGKLIP 322
Query: 343 IGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFAD 402
+ + G +EK ++ FEVSPD S + G G+ L+S KTKELIG++K+NG + + F+
Sbjct: 323 VHQVRGLKEKIVKRFEVSPDGSFLLISGIAGFSHLLSMKTKELIGSMKINGRISASTFSS 382
Query: 403 DGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVY 462
D K++ +S G+G+VY WD+ +R CI+R +DEG + G ++ S +G + A GS SG+VN+Y
Sbjct: 383 DSKRIYTSSGNGEVYVWDVNSRKCINRFLDEGSLYGLSIAASKNGQYVACGSKSGVVNIY 442
Query: 463 NRQEFLGGKR-KPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSN 521
N+ L KPIK I NL T V + FN +ILA+ S K +++L+H+PS VFSN
Sbjct: 443 NQDSCLQQTNPKPIKAIMNLVTGVTSLAFNPTTEILAVASRKMKEAVRLVHLPSCTVFSN 502
Query: 522 WPPANRN-LQYPRCLDFSPGGGFMAVGNAAGKVFLYKLNHY 561
+P ++ L + +DFSP GG+ A+GN GK LY+L+HY
Sbjct: 503 FPVYKKSTLSRVQTMDFSPRGGYFALGNEQGKALLYRLHHY 543
>UNIPROTKB|A6H702 [details] [associations]
symbol:UTP18 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
HOGENOM:HOG000242429 KO:K14553 GeneTree:ENSGT00440000033919
OMA:FPPQKKP CTD:51096 HOVERGEN:HBG082494 OrthoDB:EOG4DV5MJ
EMBL:DAAA02049023 EMBL:BC146062 IPI:IPI00854346
RefSeq:NP_001092349.1 UniGene:Bt.24386 STRING:A6H702
Ensembl:ENSBTAT00000027490 GeneID:505846 KEGG:bta:505846
InParanoid:A6H702 NextBio:20867334 Uniprot:A6H702
Length = 547
Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
Identities = 172/452 (38%), Positives = 261/452 (57%)
Query: 114 NEEDAQFSGESDDEEEAWQKKPVWVDEEEEQTNVNIAKVNRLRK-LRKEEDESLISGAEY 172
+ +D++ E+ D QKKPVW+DEE+E + NR RK + K E+ +S E
Sbjct: 111 DSDDSEVEKEAKDNFLP-QKKPVWLDEEDEDEEMVDMMNNRFRKDMMKNASENQLSKDEL 169
Query: 173 VSRLRAQHVKLNPGTEWAQLDSRSRDNDPYDESSDEETQAVVACGYEDTEAVDDILRTDE 232
RL+ + G A ++ ++ P D+ S+EE DD+L+
Sbjct: 170 QKRLKEEFQHAMGGVP-AWAEA-NKWKTPSDDESEEEE--------------DDLLQRTG 213
Query: 233 DLVVKSSAKLSPGLLEYSRLIDANADESSTGPINSVQFHRNAQLLLVAGLDRRLRFFQID 292
+ + +S L G+L+ ANA+ +T I+SVQFH AQ+++VAGLD + FQ+D
Sbjct: 214 NFI-STSTSLPKGILKMKNCQHANAERPTTARISSVQFHPRAQVVMVAGLDNAVSLFQVD 272
Query: 293 GKRNTKIQSIFLEDCPVRKASFLPDGSQAIIAGRR-KFFYSLDLVKAKADKIGPLVGREE 351
GK N KIQSI+LE P+ KA F +G + + K Y D++ K + + G +E
Sbjct: 273 GKTNPKIQSIYLEKFPIFKACFSANGEEVLATSTHSKILYVYDMLAGKLIPVHQVRGLKE 332
Query: 352 KSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGKQLLSSG 411
K + FE+SPD S + G GY+ L+S KTKELIG++K+NG + + F+ D K++ +S
Sbjct: 333 KIVRSFEISPDGSFLLINGVAGYLHLLSMKTKELIGSMKINGRIAASTFSSDSKKVYASS 392
Query: 412 GDGQVYHWDLRTRTCIHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQEFLGGK 471
GDG+VY WD+ +R C++R VDEG + G ++ TS +G + A GS+ G+VN+YN+ L
Sbjct: 393 GDGEVYVWDVNSRKCLNRFVDEGSLYGLSIATSRNGQYVACGSNCGVVNIYNQDSCLQET 452
Query: 472 R-KPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSNWPPANR-NL 529
KPIK I NL T V + FN +ILAI S K +++L+H+PS+ VFSN+P + N+
Sbjct: 453 NPKPIKAIMNLVTGVTSLTFNPTTEILAIASANMKEAVRLVHLPSFTVFSNFPVVKKKNI 512
Query: 530 QYPRCLDFSPGGGFMAVGNAAGKVFLYKLNHY 561
+DFSP G+ A+GN GK +Y+L+HY
Sbjct: 513 SLIHTMDFSPRSGYFALGNEKGKALMYRLHHY 544
>UNIPROTKB|E2RBW9 [details] [associations]
symbol:UTP18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR024977 Pfam:PF12894
GeneTree:ENSGT00440000033919 OMA:FPPQKKP EMBL:AAEX03006543
ProteinModelPortal:E2RBW9 Ensembl:ENSCAFT00000027444 Uniprot:E2RBW9
Length = 555
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 171/458 (37%), Positives = 257/458 (56%)
Query: 109 SMLSVNEEDAQFSGESDDEEE-AWQKKPVWVDEEEEQTNVNIAKVNRLRK-LRKEEDESL 166
S + E+ E + ++ +QKKPVWVDEE+E + NR RK + K ES
Sbjct: 112 SRVQAQEDSDDSEAEKEPKDNFLFQKKPVWVDEEDEDDEMVDMMNNRFRKDMMKNTGESQ 171
Query: 167 ISGAEYVSRLRAQHVKLNPGTEWAQLDSRSRDNDPYDESSDEETQAVVACGYEDTEAVDD 226
+S + RL+ + G A ++ + DES ++E DD
Sbjct: 172 LSKDKLQKRLKEEFQHAMGGVP-AWAETNKQKTSLDDESEEDE---------------DD 215
Query: 227 ILRTDEDLVVKSSAKLSPGLLEYSRLIDANADESSTGPINSVQFHRNAQLLLVAGLDRRL 286
+L+ + + +S L G+L+ ANA+ +T I+SVQFH AQ+++VA LD +
Sbjct: 216 LLQRTGNFI-STSTSLPKGILKIKNCQHANAERPTTARISSVQFHPRAQVVMVAALDNAV 274
Query: 287 RFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIAG-RRKFFYSLDLVKAKADKIGP 345
FQ+DG+ N KIQSI+LE P+ KA F +G + + K Y D++ K +
Sbjct: 275 SLFQVDGRTNPKIQSIYLEKFPIYKACFSANGEEVLATSIHSKVLYVYDMLAGKLIPVHQ 334
Query: 346 LVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGK 405
+ G +EK + FEVSPD S + G GY+ L+S KTKELIG++K+NG V + F+ D K
Sbjct: 335 VRGLKEKLVRSFEVSPDGSFLLINGVAGYLHLLSMKTKELIGSMKINGRVAASTFSSDSK 394
Query: 406 QLLSSGGDGQVYHWDLRTRTCIHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQ 465
++ +S GDG+VY WD+ +R C++R VDEG + G ++ TS +G + A GS+ G+VN+YN+
Sbjct: 395 KVYASSGDGEVYVWDVNSRKCLNRFVDEGSLYGLSIATSRNGQYVACGSNCGVVNIYNQD 454
Query: 466 EFLGGKR-KPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSNWPP 524
L KP+K I NL T V + FN +ILAI S K +++L+H+PS VFSN+P
Sbjct: 455 SCLQETNPKPVKAIMNLVTGVTSLTFNPTTEILAIASEEMKEAVRLVHLPSCTVFSNFPV 514
Query: 525 ANRN-LQYPRCLDFSPGGGFMAVGNAAGKVFLYKLNHY 561
+ + +DFSP G+ A+GN GK LY+L+HY
Sbjct: 515 IKKKTISLVHTMDFSPRSGYFALGNEKGKALLYRLHHY 552
>MGI|MGI:1923402 [details] [associations]
symbol:Utp18 "UTP18, small subunit (SSU) processome
component, homolog (yeast)" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1923402 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0006364 EMBL:AL663078 HOGENOM:HOG000242429 KO:K14553
GeneTree:ENSGT00440000033919 OMA:FPPQKKP CTD:51096
HOVERGEN:HBG082494 OrthoDB:EOG4DV5MJ ChiTaRS:UTP18 IPI:IPI00353579
RefSeq:NP_001013393.1 UniGene:Mm.379350 ProteinModelPortal:Q5SSI6
SMR:Q5SSI6 STRING:Q5SSI6 PhosphoSite:Q5SSI6 PaxDb:Q5SSI6
PRIDE:Q5SSI6 Ensembl:ENSMUST00000066888 GeneID:217109
KEGG:mmu:217109 InParanoid:Q5SSI6 NextBio:375557 PMAP-CutDB:Q5SSI6
Bgee:Q5SSI6 Genevestigator:Q5SSI6 GermOnline:ENSMUSG00000054079
Uniprot:Q5SSI6
Length = 552
Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
Identities = 168/461 (36%), Positives = 267/461 (57%)
Query: 106 SANSMLSVNEEDAQFSGESDDEEEAWQKKPVWVDEEEEQTNVNIAKVNRLRK-LRKEEDE 164
S+ L + ++++ E+ D +K+PVWVDE++E + NR RK + K E
Sbjct: 106 SSRGQLHGSSDESEVENEAKDIFSQKKKQPVWVDEDDEDEEIVDMSNNRFRKDIMKNASE 165
Query: 165 SLISGAEYVSRLRAQHVKLNPGT-EWAQLDSRSRDNDPYDESSDEETQAVVACGYEDTEA 223
S +S + RL+ + G +WA+ S+ R SSD+E++ ED
Sbjct: 166 SKLSKDKLQKRLKEEFQHAMGGVPDWAEAGSKRRT------SSDDESE-------EDE-- 210
Query: 224 VDDILRTDEDLVVKSSAKLSPGLLEYSRLIDANADESSTGPINSVQFHRNAQLLLVAGLD 283
DD+L+ + + +S L G+L+ ANA+ +T I+SVQFH AQ+++V+G+D
Sbjct: 211 -DDLLQRTGNFI-STSTSLPRGILKMKNCRPANAERPTTARISSVQFHPGAQVVMVSGVD 268
Query: 284 RRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIAGRR-KFFYSLDLVKAKADK 342
+ FQ+DGK N KIQSI+LE P+ KA F +G + + K Y D++ K
Sbjct: 269 NAISLFQVDGKTNPKIQSIYLEKFPIFKACFSANGEEVLATSMHSKVLYVYDMLAGKLIP 328
Query: 343 IGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFAD 402
+ + G +EK+++ FEVSPD S + G G+ L+S KTKELIG++K+NG + + F+
Sbjct: 329 VHQVRGLKEKTVKQFEVSPDGSFLLISGIAGFSHLLSMKTKELIGSMKINGRIAASTFSS 388
Query: 403 DGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVY 462
D K++ + +G+VY WD+ +R C++R +DEG + G ++ S +G + A GS SG+VN+Y
Sbjct: 389 DSKRIYTYSENGEVYVWDVNSRKCMNRFLDEGSLCGLSIAASKNGQYVACGSKSGVVNIY 448
Query: 463 NRQEFLGGKR-KPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSN 521
N+ L KPIK I NL T V + FN +ILA+ S K +++L+H+PS VFSN
Sbjct: 449 NQDSCLQQTNPKPIKAIMNLVTGVTSLAFNPTTEILAVASRKMKEAVRLVHLPSCTVFSN 508
Query: 522 WPPANRN-LQYPRCLDFSPGGGFMAVGNAAGKVFLYKLNHY 561
+P ++ L + +DFSP GG+ A+GN G+ +Y+L+HY
Sbjct: 509 FPVFKKSTLSRVQTMDFSPRGGYFALGNEKGRALMYRLHHY 549
>ZFIN|ZDB-GENE-060929-668 [details] [associations]
symbol:utp18 "UTP18 small subunit (SSU) processome
component homolog (yeast)" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-060929-668 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
HOGENOM:HOG000242429 KO:K14553 CTD:51096 HOVERGEN:HBG082494
OrthoDB:EOG4DV5MJ EMBL:BC124340 IPI:IPI00801382
RefSeq:NP_001070232.1 UniGene:Dr.30950 ProteinModelPortal:Q08C85
PRIDE:Q08C85 GeneID:767797 KEGG:dre:767797 NextBio:20918176
Uniprot:Q08C85
Length = 509
Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
Identities = 162/468 (34%), Positives = 271/468 (57%)
Query: 103 VDPSANSMLSVNEEDAQFSGESDDEEEAWQKK----PVWVDEEEEQTN-VNIAKVNRLRK 157
++ ++S L +++D S S++ E ++ VW DE++EQ V++ +R R+
Sbjct: 56 LEQGSSSFLEDDDDDEVRSVCSENSEGPRGRRRARTAVWEDEDDEQEEEVDMTLRSR-RE 114
Query: 158 LRKEEDESLISGAEYVSRLRAQHVKLNPGT-EWAQLDSRSRDNDPYDESSDEETQAVVAC 216
L+K + E+ +S RL+ Q K GT WA+ + R+ DE DE+
Sbjct: 115 LKKSDAETKMSKQRLQQRLKEQFQKAMGGTPSWAEKEHRTSQKTADDEDEDED------- 167
Query: 217 GYEDTEAVDDILRTDEDLVVKSSAKLSPGLLEYSRLIDANADESSTGPINSVQFHRNAQL 276
+D+LR + + +S L G++ + ++AN++ S + SVQFH +AQ+
Sbjct: 168 --------EDLLRRTANFI-STSDSLPRGVIRIKKCVNANSECVSEAQLTSVQFHPSAQI 218
Query: 277 LLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIAG-RRKFFYSLDL 335
++ AGLD + FQ+DGK N KIQ++ LE PVR+A+F DG Q + G R K FY D+
Sbjct: 219 VMTAGLDHCVSLFQVDGKSNPKIQTVHLEKFPVRRAAFSADGEQIVATGMRNKLFYIYDM 278
Query: 336 VKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLKMNGTV 395
++ + + + G E+ + F+VSPD + G+ GY+ L+++KT+E++ ++K+NG+V
Sbjct: 279 MEGRVIPVASVRGLREQRVSDFQVSPDGKFLLLSGSSGYLHLMTTKTREVVRSMKLNGSV 338
Query: 396 RSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCINGTALCTSPDGTFFAAGSD 455
S F DG + SS DG+V+ WD+++ C+ + DEGC+ T+LC S DG + A GS
Sbjct: 339 CSAGFTADGNTIFSSSEDGEVFVWDVQSSRCVKKFTDEGCVRATSLCVSRDGRYLACGSQ 398
Query: 456 SGIVNVYNRQEFLG-GKRKPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIP 514
SG+VN+Y++ + L + KP+K + NL T + FN+ ++ILAI S + +L+H+P
Sbjct: 399 SGVVNIYSQSDCLQLAEPKPLKAVMNLLTSATSLSFNSTSEILAIGSRADDEACRLVHLP 458
Query: 515 SYNVFSNWPPANRNLQY-PRCLDFSPGGGFMAVGNAAGKVFLYKLNHY 561
S++VFSN+P + + + LDFSP GF++V N G L++L HY
Sbjct: 459 SFSVFSNFPQFRKKTIFRTQSLDFSPRSGFLSVANNKGAALLFRLLHY 506
Score = 124 (48.7 bits), Expect = 0.00021, P = 0.00021
Identities = 42/148 (28%), Positives = 72/148 (48%)
Query: 64 EMKKLENILFGSLYAPVEFGKEDEEKVQPEAETGSAVYFVDPSANSMLSVNEEDAQFSGE 123
E+++LE +LFG+ EE++ E GS+ + D + + SV E+++ G
Sbjct: 37 EVQRLEELLFGA-----------EEQLSGRLEQGSSSFLEDDDDDEVRSVCSENSE--GP 83
Query: 124 SDDEEEAWQKKPVWVDEEEEQTN-VNIAKVNRLRKLRKEEDESLISGAEYVSRLRAQHVK 182
+ VW DE++EQ V++ +R R+L+K + E+ +S RL+ Q K
Sbjct: 84 RGRRRA---RTAVWEDEDDEQEEEVDMTLRSR-RELKKSDAETKMSKQRLQQRLKEQFQK 139
Query: 183 LNPGT-EWAQLDSRSRDNDPYDESSDEE 209
GT WA+ + R+ DE DE+
Sbjct: 140 AMGGTPSWAEKEHRTSQKTADDEDEDED 167
>POMBASE|SPBC29A3.06 [details] [associations]
symbol:SPBC29A3.06 "CGI-48 family (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC29A3.06 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 EMBL:CU329671 eggNOG:COG2319
GO:GO:0006364 GO:GO:0032040 KO:K14553 EMBL:D89098 PIR:T40077
PIR:T42005 RefSeq:NP_595834.2 ProteinModelPortal:P78750
STRING:P78750 GeneID:2540529 KEGG:spo:SPBC29A3.06
HOGENOM:HOG000162649 OMA:GHEETQR OrthoDB:EOG4QZBW7 NextBio:20801656
Uniprot:P78750
Length = 519
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 168/489 (34%), Positives = 272/489 (55%)
Query: 84 KEDE-EKVQPEAE-----TGSAVYFVDPSANSM-LSVNEEDAQFSGESDDEEEAWQKKPV 136
+EDE EK++ +AE TGSA D + +S+ L + D + +DEE + + +
Sbjct: 49 QEDELEKLE-DAELFMFDTGSA----DGAKDSVPLDIIAGD---NTVKEDEEASNEIPSI 100
Query: 137 WVDEEEEQTNVNIAKVNRLRKLRKEEDESLISGAEYVSRLRAQHVKLNPGTEWAQLDSRS 196
W D ++E+ +++ +RLRKLR+ EDE +++G +Y RLR Q ++ P EWA+ +
Sbjct: 101 WEDSDDERLMISLQDHSRLRKLRQYEDEDMVNGLQYARRLRTQFERVYPVPEWAKKQDVT 160
Query: 197 RDNDPYDESSDEETQAVVACGYEDTEAVDDILRTDEDLVVKSSAKLSPGLLEYSRLIDAN 256
+ D ++ S++ +V+ +++ + ++ + +SS L+PG + RL DAN
Sbjct: 161 EEEDEFNALSEK---SVIP------KSLKSLFKSSVSYINQSSKLLAPGTINIKRLKDAN 211
Query: 257 ADESSTGPINSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLP 316
S I + H LLL G DR LR +Q+DGK N + S+ L ++ A F P
Sbjct: 212 FQAPSHSGIRCMSIHPYFPLLLTCGFDRTLRIYQLDGKVNPLVTSLHLRSSALQTALFHP 271
Query: 317 DGSQAIIAGRRKFFYSLDLVKAKADKIGPLVGRE--EKSLEFFEVSPDSSVIAFVGNEGY 374
DG + I AGRRK+ Y DL A+ K+ + G+E + S+E F V P IA G G+
Sbjct: 272 DGKRVIAAGRRKYMYIWDLESAQVQKVSRMYGQENFQPSMERFHVDPTGKYIALEGRSGH 331
Query: 375 ILLVSSKTKELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHR-AVDE 433
I L+ + T + + K+ G + + F DG ++L +V+H+++ R+ + R V +
Sbjct: 332 INLLHALTGQFATSFKIEGVLSDVLFTSDGSEMLVLSYGAEVWHFNVEQRSVVRRWQVQD 391
Query: 434 GCINGTALCTSPDGTFFAAGSDSGIVNVYNRQEF-LGGKRKPIKTIENLTTKVDFMKFNN 492
G ++ T C P + A GS SGIVN+Y+ Q KP+ T++N+T ++ M F+
Sbjct: 392 G-VSTTHFCLDPSNKYLAIGSKSGIVNIYDLQTSNADAAPKPVTTLDNITFSINSMSFSQ 450
Query: 493 DAQILAICSTMKKNSLKLIHIPSYNVFSNWPPANRNLQYPRCLDFSPGGGFMAVGNAAGK 552
D+Q+LAI S KK++L+L+H+PS++VF NWP + L CL F GG + VGN AG+
Sbjct: 451 DSQVLAIASRGKKDTLRLVHVPSFSVFRNWPTSATPLGRVTCLAFGKGGE-LCVGNEAGR 509
Query: 553 VFLYKLNHY 561
V L+KL HY
Sbjct: 510 VGLWKLAHY 518
>SGD|S000003605 [details] [associations]
symbol:UTP18 "Possible U3 snoRNP protein involved in
maturation of pre-18S rRNA" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000003605 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:BK006943 EMBL:X88851 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480 EMBL:Z34288 GO:GO:0034388
KO:K14553 OMA:SQFEKIY eggNOG:NOG237745 GeneTree:ENSGT00440000033919
HOGENOM:HOG000162649 OrthoDB:EOG4QZBW7 EMBL:Z49344 EMBL:AY692560
PIR:S50802 RefSeq:NP_012466.1 ProteinModelPortal:P40362 SMR:P40362
DIP:DIP-6392N IntAct:P40362 MINT:MINT-561650 STRING:P40362
PaxDb:P40362 PeptideAtlas:P40362 EnsemblFungi:YJL069C GeneID:853376
KEGG:sce:YJL069C CYGD:YJL069c NextBio:973825 Genevestigator:P40362
GermOnline:YJL069C Uniprot:P40362
Length = 594
Score = 333 (122.3 bits), Expect = 2.9e-53, Sum P(3) = 2.9e-53
Identities = 103/311 (33%), Positives = 154/311 (49%)
Query: 83 GKEDEEKVQPEAETGSA-------VYFVDPSANS--------MLSVNEEDAQFSGE-SDD 126
G E + + EA+ G ++FVD N + V++ED S + S+D
Sbjct: 60 GSESDNSEEDEAQNGELDHVNNDQLFFVDDGGNEDSQDKNEDTMDVDDEDDSSSDDYSED 119
Query: 127 EEEAWQKKPVWVDEEEEQTNVNIAKVNRLRKLRKEEDESLISGAEYVSRLRAQHVKLNPG 186
EEA W+D ++E+ V I N+ +KLR +ES I+G Y++RLR+Q K+ P
Sbjct: 120 SEEA-----AWIDSDDEKIKVPILVTNKTKKLRTSYNESKINGVHYINRLRSQFEKIYPR 174
Query: 187 TEWAQLDSRSRDNDPYDESSDEETQAVVACGYEDTEAVDDILRTDEDL--VVKSSAKLSP 244
+W +S S +D +E +EE V G D A+ IL T + + +S L P
Sbjct: 175 PKWVDDESDSELDD--EEDDEEEGSNNVING--DINALTKILSTTYNYKDTLSNSKLLPP 230
Query: 245 GLLEYSRLIDANADESSTGPINSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFL 304
L+ RL DANA S I S+ FH + LLL G D+ LR + IDGK N + S+ L
Sbjct: 231 KKLDIVRLKDANASHPSHSAIQSLSFHPSKPLLLTGGYDKTLRIYHIDGKTNHLVTSLHL 290
Query: 305 EDCPVRKASF---LPDGSQAII--AGRRKFFYSLDLV--------KAKADKIGPLVGRE- 350
P++ +F L + +Q I AGRR++ +S DL AK +K L G E
Sbjct: 291 VGSPIQTCTFYTSLSNQNQQNIFTAGRRRYMHSWDLSLENLTHSQTAKIEKFSRLYGHES 350
Query: 351 -EKSLEFFEVS 360
++S E F+V+
Sbjct: 351 TQRSFENFKVA 361
Score = 259 (96.2 bits), Expect = 2.9e-53, Sum P(3) = 2.9e-53
Identities = 50/114 (43%), Positives = 73/114 (64%)
Query: 449 FFAAGSDSGIVNVYNRQEFLGGKRK-PIKTIENLTTKVDFMKFNNDAQILAICSTMKKNS 507
+ A GS+SG VN+Y+R + P+ ++ LTT + ++F+ D QIL + S K++
Sbjct: 481 WLAVGSESGFVNLYDRNNAMTSSTPTPVAALDQLTTTISNLQFSPDGQILCMASRAVKDA 540
Query: 508 LKLIHIPSYNVFSNWPPANRNLQYPRCLDFSPGGGFMAVGNAAGKVFLYKLNHY 561
L+L+H+PS +VFSNWP + L + FSP GG +AVGN GKV L+KLNHY
Sbjct: 541 LRLVHLPSCSVFSNWPTSGTPLGKVTSVAFSPSGGLLAVGNEQGKVRLWKLNHY 594
Score = 62 (26.9 bits), Expect = 2.9e-53, Sum P(3) = 2.9e-53
Identities = 36/123 (29%), Positives = 56/123 (45%)
Query: 338 AKADKIGPLVGRE--EKSLEFFEV-----SPDSSVIAFV---GNEGYI-LLVSSKTKELI 386
AK +K L G E ++S E F+V S +SV V GN G+I +L S+ L+
Sbjct: 337 AKIEKFSRLYGHESTQRSFENFKVAHLQNSQTNSVHGIVLLQGNNGWINILHSTSGLWLM 396
Query: 387 GTLKMNGTVRSLAF----ADDGKQ---LLSSGGDGQVYHWDL-RTRTCIHRAVDEGCING 438
G K+ G + GK L++ G+V+ +DL + I R D+G +
Sbjct: 397 GC-KIEGVITDFCIDYQPISRGKFRTILIAVNAYGEVWEFDLNKNGHVIRRWKDQGGVGI 455
Query: 439 TAL 441
T +
Sbjct: 456 TKI 458
Score = 48 (22.0 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 28/113 (24%), Positives = 53/113 (46%)
Query: 369 VGNE-GYILL------VSSKTKELIGTL-KMNGTVRSLAFADDGKQL-LSSGG--DG-QV 416
VG+E G++ L ++S T + L ++ T+ +L F+ DG+ L ++S D ++
Sbjct: 484 VGSESGFVNLYDRNNAMTSSTPTPVAALDQLTTTISNLQFSPDGQILCMASRAVKDALRL 543
Query: 417 YHWDLRTRTCIHRAVDEGCING--TALCTSPDGTFFAAGSDSGIVNVYNRQEF 467
H L + + G G T++ SP G A G++ G V ++ +
Sbjct: 544 VH--LPSCSVFSNWPTSGTPLGKVTSVAFSPSGGLLAVGNEQGKVRLWKLNHY 594
>FB|FBgn0262560 [details] [associations]
symbol:wcd "wicked" species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=IPI] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=IMP] [GO:0007405 "neuroblast proliferation" evidence=IMP]
[GO:0042585 "germinal vesicle" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0048132 "female germ-line stem cell division"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0007405 GO:GO:0048132 GO:GO:0006364 GO:GO:0030532
GO:GO:0042585 KO:K14553 eggNOG:NOG237745
GeneTree:ENSGT00440000033919 EMBL:AY119590 RefSeq:NP_611121.1
UniGene:Dm.11287 ProteinModelPortal:Q9V7P1 DIP:DIP-23848N
MINT:MINT-322375 STRING:Q9V7P1 PaxDb:Q9V7P1 PRIDE:Q9V7P1
EnsemblMetazoa:FBtr0087170 GeneID:36831 KEGG:dme:Dmel_CG7989
CTD:36831 FlyBase:FBgn0262560 InParanoid:Q9V7P1 OMA:RETKNEG
OrthoDB:EOG4GHX4M PhylomeDB:Q9V7P1 GenomeRNAi:36831 NextBio:800607
Bgee:Q9V7P1 GermOnline:CG7989 Uniprot:Q9V7P1
Length = 506
Score = 488 (176.8 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 108/345 (31%), Positives = 185/345 (53%)
Query: 219 EDTEAVDDILRTDEDLVVKS-SAKLSPGLLEYSRLIDANADESSTGPINSVQFHRNAQLL 277
ED + +++LRT + K+ ++ L L + R+ D N + G S+QFH +
Sbjct: 161 EDVSSDEELLRTVGFIDRKARNSDLPQKTLNFKRVKDLNRATYAEGNATSIQFHPTSTAA 220
Query: 278 LVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIAGRRKFFYSLDLVK 337
LVAG++ + +DG++N ++ ++ + P+ + P G++A + F+YS DL++
Sbjct: 221 LVAGMNGLATIYAVDGQKNERLHNMRFKKFPLACSRIAPCGTRAFFGSVKPFYYSYDLLE 280
Query: 338 AKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLKMNGTVRS 397
AK K+ L G E + FEVSP I G G I L+++KT EL+ + K G V+
Sbjct: 281 AKESKL-KLPGAME-FMHRFEVSPCGKFIVTAGKFGAIHLLTAKTNELLHSFKQEGKVKG 338
Query: 398 LAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCINGTALCTSPDGTFFAAGSDSG 457
++ D K++L G V +LR H +D+GCI+G ++ SP+ A GS G
Sbjct: 339 FTWSSDSKRILVCGSTSNVSVLNLRQNLIEHIFMDDGCIHGESIQLSPNQRLLATGSQEG 398
Query: 458 IVNVYNRQEFLGGKR-KPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSY 516
+VN+Y+ + K +P K NL T + ++FN+ +++LA+CS+ N+ KL H PS
Sbjct: 399 VVNIYDYESIFASKAPQPEKRFMNLRTAITDLQFNHSSELLAMCSSEAPNAFKLAHFPSA 458
Query: 517 NVFSNWPPANRNLQYPRCLDFSPGGGFMAVGNAAGKVFLYKLNHY 561
V+SN+P N + + + FSP F+A +V L++L ++
Sbjct: 459 TVYSNFPAQNEKVGFVTSMAFSPHSSFLAFATKGKQVPLFRLKYF 503
Score = 191 (72.3 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 65/232 (28%), Positives = 110/232 (47%)
Query: 123 ESDDEEEAWQKKP------VWVDEEEEQTNV-NIAKVNR----LRKLRKEEDESLISGAE 171
E + EE Q KP W D ++E V ++ K + L LRK++ S E
Sbjct: 81 EDEQEENPGQAKPGDKRKAAWSDSDDEDLQVGDVKKATKHTGPLNHLRKDK-----SYKE 135
Query: 172 YVSRLRAQHVKLNPGTEWAQLDSRSRDNDPYDESSDEETQAVVACGYEDTEAVDDILRTD 231
Y++ R Q P +WA+ ++ D++ D SSDEE V G+ D +A +
Sbjct: 136 YLTA-RFQRTLNQP--KWAEKKVKNEDDE--DVSSDEELLRTV--GFIDRKA------RN 182
Query: 232 EDLVVKSSAKLSPGLLEYSRLIDANADESSTGPINSVQFHRNAQLLLVAGLDRRLRFFQI 291
DL K+ L + R+ D N + G S+QFH + LVAG++ + +
Sbjct: 183 SDLPQKT--------LNFKRVKDLNRATYAEGNATSIQFHPTSTAALVAGMNGLATIYAV 234
Query: 292 DGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIAGRRKFFYSLDLVKAKADKI 343
DG++N ++ ++ + P+ + P G++A + F+YS DL++AK K+
Sbjct: 235 DGQKNERLHNMRFKKFPLACSRIAPCGTRAFFGSVKPFYYSYDLLEAKESKL 286
Score = 41 (19.5 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 77 YAPVEFGKEDEEKVQPEAETGSAVYFVDPSA-NSML 111
+A + ED+E V + E V F+D A NS L
Sbjct: 150 WAEKKVKNEDDEDVSSDEELLRTVGFIDRKARNSDL 185
>ASPGD|ASPL0000066107 [details] [associations]
symbol:AN7458 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0003676
GO:GO:0030529 EMBL:AACD01000129 EMBL:BN001304 KO:K14553 OMA:SQFEKIY
eggNOG:NOG237745 HOGENOM:HOG000162649 OrthoDB:EOG4QZBW7
RefSeq:XP_680727.1 STRING:Q5AW72 EnsemblFungi:CADANIAT00000551
GeneID:2869433 KEGG:ani:AN7458.2 Uniprot:Q5AW72
Length = 579
Score = 371 (135.7 bits), Expect = 3.2e-47, Sum P(2) = 3.2e-47
Identities = 109/382 (28%), Positives = 191/382 (50%)
Query: 81 EFGKEDEEKVQPEA--ETGSA-VYFVDPSANSMLSVNEEDAQFSGESDDEEEAWQKKP-V 136
E E EE ++ E E A ++F+D A + S E + E +D++E P +
Sbjct: 58 ESADEAEEGLRDEDLDEMDDADLFFLDSGAGPV-STELESSATPAEVEDKDEDEDSLPAL 116
Query: 137 WVDEEEEQTNVNIAKVNRLRKLRKEEDESLISGAEYVSRLRAQHVKLNPGTEWAQLDSRS 196
W D ++E+ +++A NRLRKLR E E +ISG EY+ RLR Q+++L+P +WA+ +S
Sbjct: 117 WHDSDDERITISLAGNNRLRKLRVTESEDIISGKEYIRRLRRQYLQLHPTPDWAKPNSNK 176
Query: 197 RDNDPYDESSDEETQAVVACGYEDTEAVDDILR-TDEDLVVKSSA-----KLSPGLLEYS 250
+ ++ D+S+ E+ G + + +L+ D + SA KL ++
Sbjct: 177 QADENEDDSNYEDEMDTDEEGEISAQPLAKLLQGIDFTKIETESATGGRPKLRKEVISIQ 236
Query: 251 RLIDANADESSTGPINSVQFHRNAQLLLVAGLDRRLRFFQI--DGKR-NTKIQSIFLEDC 307
RL D D+ S + S+ FH + L+L +G L + D + + S+ +
Sbjct: 237 RLKDIGKDQPSA--VTSLTFHPHYPLILSSGPASTLFIHHVSPDAPSPHPLLTSLHIRQT 294
Query: 308 PVRKASFLPDGSQAIIAGRRKFFYSLDLVKAKADKIGPLVGR--EEKSLEFFEVSPDSSV 365
P+ ++F PDG Q +GRR++++ +L K DK+ R E+KS+E F++SP
Sbjct: 295 PISTSAFSPDGHQIYASGRRRYYHIWNLNSGKVDKVNGSADRREEQKSMERFKLSPCGRF 354
Query: 366 IAFVGNE----GYILLVSSKTKELIGTLKMNGT--VRSLAFADDGKQLLSSGGDGQVYHW 419
I VG+ G I + ++ T + I ++++G + A+ +GK L + +G+V W
Sbjct: 355 IGLVGSTRKGGGVINIHNTVTAQWIAQVRIDGRGGIADFAWWSNGKGLTAVNLNGEVSEW 414
Query: 420 DLRTRTCIHRAVDEGCINGTAL 441
D + + R D G + T L
Sbjct: 415 DAQLNRIVARWKDAGGVGTTVL 436
Score = 178 (67.7 bits), Expect = 3.2e-47, Sum P(2) = 3.2e-47
Identities = 38/126 (30%), Positives = 69/126 (54%)
Query: 449 FFAAGSDSGIVNVYNRQEF----------------LGGKRKPIKTIENLTTKVDFMKFNN 492
+ A GS SGIVN+Y+R ++ + +P++ ++ L T + ++F
Sbjct: 452 YVAIGSKSGIVNIYDRVQWAVNYASLLSKGDTSTAISRNPEPLRALDQLVTSISHIEFAP 511
Query: 493 DAQILAICSTMKKNSLKLIHIPSYNVFSNWPPANRNLQYPRCLDFSPGGGFMAVGNAAGK 552
D Q LA+ S +KK++L+L+H+P V+ NWP + L + SP ++AVGN G+
Sbjct: 512 DGQFLAMASEIKKDALRLVHLPDCTVYRNWPTQSTPLGRVTSVAISPNSEYLAVGNDRGR 571
Query: 553 VFLYKL 558
+ L+++
Sbjct: 572 IRLWQI 577
Score = 47 (21.6 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 439 TALCTSPDGTFFAAGSDSGIVNVYNRQ 465
T++ SP+ + A G+D G + ++ Q
Sbjct: 552 TSVAISPNSEYLAVGNDRGRIRLWQIQ 578
Score = 43 (20.2 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 16/73 (21%), Positives = 34/73 (46%)
Query: 193 DSRSRDNDPYDE--SSDEETQAVVACGYEDTEAVDDILRTDEDLVVKSSAKLSPGLLEYS 250
+ + + N P ++ DE + + + + D + D L+T +D+ +P L +
Sbjct: 4 EGQKKKNAPEEQVLEKDETEKRLESLLFGDGDGFQDALKTGQDI--------NP--LALT 53
Query: 251 RLIDANADESSTG 263
+ D +ADE+ G
Sbjct: 54 TVSDESADEAEEG 66
Score = 38 (18.4 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 429 RAVDEGCINGTALCTSPDGTFFAAGSD 455
RA+D+ + + + +PDG F A S+
Sbjct: 495 RALDQLVTSISHIEFAPDGQFLAMASE 521
>UNIPROTKB|E1C7Z0 [details] [associations]
symbol:UTP18 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00440000033919 EMBL:AADN02029983 IPI:IPI00579470
Ensembl:ENSGALT00000004723 OMA:QFQRAMG Uniprot:E1C7Z0
Length = 400
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 114/310 (36%), Positives = 165/310 (53%)
Query: 121 SGESDDEEEAW----QKKPVWVDEEEEQTNVNIAKVNRLRK-LRKEEDESLISGAEYVSR 175
S +S+ E EA K P WVDE++E I +R R+ L K + E +++ + +R
Sbjct: 108 SSDSESENEAKGGLPSKGPAWVDEDDEAEE-RIDMTHRYRRELMKSDAEKILTKKKLKAR 166
Query: 176 LRAQHVKLNPGTE-WAQLDSRSRDNDPYDESSDEETQAVVACGYEDTEAVDDIL-RTDED 233
L Q + G WA ++R + +S +E DD+L RT
Sbjct: 167 LEEQFQRAMGGVPAWADRENRKKSKQAASDSGSDED--------------DDLLCRTGN- 211
Query: 234 LVVKSSAKLSPGLLEYSRLIDANADESSTGPINSVQFHRNAQLLLVAGLDRRLRFFQIDG 293
V SS L G+LE + AN + + G +++VQFH +AQ++L AG DR + FQ+DG
Sbjct: 212 -FVSSSESLPRGILEMKSCLPANQERLADGKLSTVQFHPSAQVVLTAGRDRSVSLFQVDG 270
Query: 294 KRNTKIQSIFLEDCPVRKASFLPDGSQAIIAG-RRKFFYSLDLVKAKADKIGPLVGREEK 352
RN KIQSI+LE P+ KA F DG Q I G K FY D++ + + G EEK
Sbjct: 271 IRNPKIQSIYLESFPIYKARFSADGEQVIATGTHHKVFYVYDMMGGSIIPVHQVRGMEEK 330
Query: 353 SLEFFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGKQLLSSGG 412
++ FEVSPD S + G GY+ L+S KTKELI T+K+NG + AF D ++ S
Sbjct: 331 FVKNFEVSPDGSFMLLTGTSGYLHLLSMKTKELISTMKVNGRTTACAFTSDSSKMYSYSK 390
Query: 413 DGQVYHWDLR 422
+G+V+ WD+R
Sbjct: 391 EGEVFIWDVR 400
>CGD|CAL0003002 [details] [associations]
symbol:UTP18 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IDA] [GO:0034388 "Pwp2p-containing subcomplex
of 90S preribosome" evidence=IEA] [GO:0000472 "endonucleolytic
cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447 "endonucleolytic
cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003002 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 GO:GO:0032040 EMBL:AACQ01000089 KO:K14553
HOGENOM:HOG000162649 RefSeq:XP_715203.1 RefSeq:XP_889022.1
ProteinModelPortal:Q5A0E1 STRING:Q5A0E1 GeneID:3643123
GeneID:3703936 KEGG:cal:CaO19.7154 KEGG:cal:CaO19_7154
Uniprot:Q5A0E1
Length = 552
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 116/373 (31%), Positives = 194/373 (52%)
Query: 65 MKKLENIL-FGSLYAPV-EFGKEDEEKVQPEAETGSAVYFVDPSANSMLSVNEEDAQFSG 122
+KKL+N+ + + E G E E ++ + ++F+D N S + +D +
Sbjct: 37 LKKLDNLYDYSDEEEEIDEKGSEKESDIEDLQDED--LFFIDDGNNEEHS-SGDDMEIDQ 93
Query: 123 ESDDEE-EAWQKKPVWVDEEEEQTNVNIAKVNRLRKLRKEEDESLISGAEYVSRLRAQHV 181
D+EE E W D ++E+ N+++ ++L+KLRK +S+ISG Y+ RLR+Q
Sbjct: 94 SEDEEEGEDQDSDNAWEDSDDEKVNISLLTSDKLKKLRKTPQDSVISGKSYIIRLRSQFE 153
Query: 182 KLNPGTEWAQ-LDSRSRDN-DPYDESSDEETQAVVACGYEDTEAVDDILRTDEDLVVKSS 239
K+ P +W + +++ S D D DE ++ + V T A+ +IL + E +
Sbjct: 154 KIYPRPQWIEDIENNSDDEKDLSDEDKVDDEEGQVG----STTALLNILSSTEKFINTKQ 209
Query: 240 AKL-SPGLLEYSRLIDANADESSTGPINSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTK 298
KL + + +RL DAN I ++ FH N +LL G D+ +R +QIDGK N
Sbjct: 210 LKLIAANKISITRLKDANYKRIGKSGIQTIDFHPNYPILLTGGFDKTIRIYQIDGKSNNF 269
Query: 299 IQSIFLEDCPVRKASFLPD--G-----SQAIIA-GRRKFFYSLDLVKAKADKIGPLVGRE 350
I S FL++CP+ +ASF P G S I A GRR++ ++L + +KI L G E
Sbjct: 270 ITSYFLKNCPIMEASFYPQLSGDDTKTSNLIYASGRRRYMNKINLSTGEIEKISRLYGHE 329
Query: 351 E--KSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGKQLL 408
+ KS E+F++SP I GN G+ L++++T + K+ GT+ AFA+D ++
Sbjct: 330 QTQKSFEYFKISPQGKYIGLTGNNGWCNLLNAQTGHWVHGFKIEGTIVDFAFANDESFIM 389
Query: 409 SSGGDGQVYHWDL 421
G+V+ + L
Sbjct: 390 IVNSAGEVWEFAL 402
Score = 406 (148.0 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 89/250 (35%), Positives = 143/250 (57%)
Query: 324 AGRRKFFYSLDLVKAKADKIGPLVGREE--KSLEFFEVSPDSSVIAFVGNEGYILLVSSK 381
+GRR++ ++L + +KI L G E+ KS E+F++SP I GN G+ L++++
Sbjct: 303 SGRRRYMNKINLSTGEIEKISRLYGHEQTQKSFEYFKISPQGKYIGLTGNNGWCNLLNAQ 362
Query: 382 TKELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWDLR----TRT---CIHRAVDEG 434
T + K+ GT+ AFA+D ++ G+V+ + L ++T I R D+G
Sbjct: 363 TGHWVHGFKIEGTIVDFAFANDESFIMIVNSAGEVWEFALEGKITSKTPNKIIRRWYDDG 422
Query: 435 CINGTAL-CTSPDGTFFAAGSDSGIVNVYNRQEFLGGKR--KPIKTIENLTTKVDFMKFN 491
+ T L + + A G+++GIVN+Y+R F KPIKT+ENL T + + FN
Sbjct: 423 GVGITKLQIGGKNNRWVAIGNNNGIVNIYDRSVFAPETTHPKPIKTVENLITSISSLVFN 482
Query: 492 NDAQILAICSTMKKNSLKLIHIPSYNVFSNWPPANRNLQYPRCLDFSPGGGFMAVGNAAG 551
D Q+L I S K+++L+L+H+PS +V+SNWP + L + FSP +A+GN G
Sbjct: 483 PDGQLLCIASRAKRDALRLVHLPSGSVYSNWPTSGTPLGKVTSIAFSPNNEMLAIGNQTG 542
Query: 552 KVFLYKLNHY 561
KV L++LNHY
Sbjct: 543 KVTLWRLNHY 552
Score = 50 (22.7 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 19/107 (17%), Positives = 50/107 (46%)
Query: 25 LAVEENKDVEDGKESDLETS-XXXXXXXXXXXXXXXXQVKEMKKL--ENILFGSLYAPVE 81
+ +++++D E+G++ D + + ++K+++K ++++ G Y +
Sbjct: 89 MEIDQSEDEEEGEDQDSDNAWEDSDDEKVNISLLTSDKLKKLRKTPQDSVISGKSYI-IR 147
Query: 82 FGKEDEEKVQPEAETGSAVYFVDPSANSMLSVNEEDAQFSGESDDEE 128
+ EK+ P + +++ N+ S +E+D + DDEE
Sbjct: 148 L-RSQFEKIYPRPQ------WIEDIENN--SDDEKDLSDEDKVDDEE 185
>UNIPROTKB|Q5A0E1 [details] [associations]
symbol:CaO19.7154 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003002 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 GO:GO:0032040 EMBL:AACQ01000089 KO:K14553
HOGENOM:HOG000162649 RefSeq:XP_715203.1 RefSeq:XP_889022.1
ProteinModelPortal:Q5A0E1 STRING:Q5A0E1 GeneID:3643123
GeneID:3703936 KEGG:cal:CaO19.7154 KEGG:cal:CaO19_7154
Uniprot:Q5A0E1
Length = 552
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 116/373 (31%), Positives = 194/373 (52%)
Query: 65 MKKLENIL-FGSLYAPV-EFGKEDEEKVQPEAETGSAVYFVDPSANSMLSVNEEDAQFSG 122
+KKL+N+ + + E G E E ++ + ++F+D N S + +D +
Sbjct: 37 LKKLDNLYDYSDEEEEIDEKGSEKESDIEDLQDED--LFFIDDGNNEEHS-SGDDMEIDQ 93
Query: 123 ESDDEE-EAWQKKPVWVDEEEEQTNVNIAKVNRLRKLRKEEDESLISGAEYVSRLRAQHV 181
D+EE E W D ++E+ N+++ ++L+KLRK +S+ISG Y+ RLR+Q
Sbjct: 94 SEDEEEGEDQDSDNAWEDSDDEKVNISLLTSDKLKKLRKTPQDSVISGKSYIIRLRSQFE 153
Query: 182 KLNPGTEWAQ-LDSRSRDN-DPYDESSDEETQAVVACGYEDTEAVDDILRTDEDLVVKSS 239
K+ P +W + +++ S D D DE ++ + V T A+ +IL + E +
Sbjct: 154 KIYPRPQWIEDIENNSDDEKDLSDEDKVDDEEGQVG----STTALLNILSSTEKFINTKQ 209
Query: 240 AKL-SPGLLEYSRLIDANADESSTGPINSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTK 298
KL + + +RL DAN I ++ FH N +LL G D+ +R +QIDGK N
Sbjct: 210 LKLIAANKISITRLKDANYKRIGKSGIQTIDFHPNYPILLTGGFDKTIRIYQIDGKSNNF 269
Query: 299 IQSIFLEDCPVRKASFLPD--G-----SQAIIA-GRRKFFYSLDLVKAKADKIGPLVGRE 350
I S FL++CP+ +ASF P G S I A GRR++ ++L + +KI L G E
Sbjct: 270 ITSYFLKNCPIMEASFYPQLSGDDTKTSNLIYASGRRRYMNKINLSTGEIEKISRLYGHE 329
Query: 351 E--KSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGKQLL 408
+ KS E+F++SP I GN G+ L++++T + K+ GT+ AFA+D ++
Sbjct: 330 QTQKSFEYFKISPQGKYIGLTGNNGWCNLLNAQTGHWVHGFKIEGTIVDFAFANDESFIM 389
Query: 409 SSGGDGQVYHWDL 421
G+V+ + L
Sbjct: 390 IVNSAGEVWEFAL 402
Score = 406 (148.0 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 89/250 (35%), Positives = 143/250 (57%)
Query: 324 AGRRKFFYSLDLVKAKADKIGPLVGREE--KSLEFFEVSPDSSVIAFVGNEGYILLVSSK 381
+GRR++ ++L + +KI L G E+ KS E+F++SP I GN G+ L++++
Sbjct: 303 SGRRRYMNKINLSTGEIEKISRLYGHEQTQKSFEYFKISPQGKYIGLTGNNGWCNLLNAQ 362
Query: 382 TKELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWDLR----TRT---CIHRAVDEG 434
T + K+ GT+ AFA+D ++ G+V+ + L ++T I R D+G
Sbjct: 363 TGHWVHGFKIEGTIVDFAFANDESFIMIVNSAGEVWEFALEGKITSKTPNKIIRRWYDDG 422
Query: 435 CINGTAL-CTSPDGTFFAAGSDSGIVNVYNRQEFLGGKR--KPIKTIENLTTKVDFMKFN 491
+ T L + + A G+++GIVN+Y+R F KPIKT+ENL T + + FN
Sbjct: 423 GVGITKLQIGGKNNRWVAIGNNNGIVNIYDRSVFAPETTHPKPIKTVENLITSISSLVFN 482
Query: 492 NDAQILAICSTMKKNSLKLIHIPSYNVFSNWPPANRNLQYPRCLDFSPGGGFMAVGNAAG 551
D Q+L I S K+++L+L+H+PS +V+SNWP + L + FSP +A+GN G
Sbjct: 483 PDGQLLCIASRAKRDALRLVHLPSGSVYSNWPTSGTPLGKVTSIAFSPNNEMLAIGNQTG 542
Query: 552 KVFLYKLNHY 561
KV L++LNHY
Sbjct: 543 KVTLWRLNHY 552
Score = 50 (22.7 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 19/107 (17%), Positives = 50/107 (46%)
Query: 25 LAVEENKDVEDGKESDLETS-XXXXXXXXXXXXXXXXQVKEMKKL--ENILFGSLYAPVE 81
+ +++++D E+G++ D + + ++K+++K ++++ G Y +
Sbjct: 89 MEIDQSEDEEEGEDQDSDNAWEDSDDEKVNISLLTSDKLKKLRKTPQDSVISGKSYI-IR 147
Query: 82 FGKEDEEKVQPEAETGSAVYFVDPSANSMLSVNEEDAQFSGESDDEE 128
+ EK+ P + +++ N+ S +E+D + DDEE
Sbjct: 148 L-RSQFEKIYPRPQ------WIEDIENN--SDDEKDLSDEDKVDDEE 185
>WB|WBGene00015104 [details] [associations]
symbol:B0280.9 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0005730 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006364
EMBL:FO080148 KO:K14553 PIR:T15303 RefSeq:NP_498555.1
ProteinModelPortal:P42000 SMR:P42000 STRING:P42000 PaxDb:P42000
EnsemblMetazoa:B0280.9 GeneID:175994 KEGG:cel:CELE_B0280.9
UCSC:B0280.9 CTD:175994 WormBase:B0280.9 eggNOG:NOG237745
GeneTree:ENSGT00440000033919 HOGENOM:HOG000020936 InParanoid:P42000
OMA:FPPQKKP NextBio:890650 Uniprot:P42000
Length = 429
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 105/413 (25%), Positives = 201/413 (48%)
Query: 160 KEEDESLISGAEYVSRLRAQHVKLNPGTEWAQLDSRS---RDNDPYDESSDEETQAVVAC 216
+++D +++ + V +K E +LDS+ R + + + + A
Sbjct: 17 EDDDNMVVAVPKKVKMTMRVELKRTTDEEHGELDSKEYVGRLQEAFRKRHGGTPKWAKAA 76
Query: 217 GYEDTEAVDDILRTDEDLVVKSSAKLSPGLLEYSRLIDANADESSTGPINSVQFHRNAQL 276
++ E +L+T + K L + + + D N T I V+FH+ +
Sbjct: 77 AGDEEEG--SLLKTAAGYLAKD-VNLPKTTIHTTLIKDFNIGHRYTRGITVVKFHKTRPV 133
Query: 277 LLVAGLDRRLRFFQI--DGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIAGRRK-FFYSL 333
L+VA ++ F++ + K++ +QS P+ G I + RK +
Sbjct: 134 LIVADQGGNVQLFKVSREVKKDRFLQSANFSKFPIDSLEIADKGHSVICSSSRKEYLMQY 193
Query: 334 DLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLKMNG 393
++ + ++ P ++ + F +S DS +A G+ +I ++ + + E I T+ +
Sbjct: 194 NMETREVTQLKPPNTVPKQGIRLFAISHDSQFLAIAGHNSHIYVLHATSMEHITTISLPA 253
Query: 394 TVRSLAF-ADDGKQLLSSGGDGQVYHWDLR---TRTCIHRAVDEGCINGTALCTSPDGTF 449
+ F +++ GQ+ ++ T++ H D+G ++GT L S G +
Sbjct: 254 NASEIKFFPSHSREIWIICETGQIVIANIGLPGTKSSQHTFTDDGAVHGTTLAISQHGDY 313
Query: 450 FAAGSDSGIVNVYNRQEFLGGKR-KPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSL 508
FA GSD+GIVNVY+ + +P+ + NL T V + FN+DAQ++AICS +K N L
Sbjct: 314 FATGSDTGIVNVYSGNDCRNSTNPRPLFNVSNLVTAVSSIAFNSDAQLMAICSNVKDNHL 373
Query: 509 KLIHIPSYNVFSNWPPANRNLQYPRCLDFSPGGGFMAVGNAAGKVFLYKLNHY 561
+L+H+ S F N+P N + + RC++FSP GG+MAVGN G++ +++++H+
Sbjct: 374 RLVHVASQTTFKNFPERNGKVTHARCVEFSPNGGYMAVGNDDGRLHVFEIHHF 426
>DICTYBASE|DDB_G0271240 [details] [associations]
symbol:utp18 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 SMART:SM00320
dictyBase:DDB_G0271240 Gene3D:2.130.10.10 SUPFAM:SSF50978
GenomeReviews:CM000151_GR EMBL:AAFI02000006 KO:K14553
eggNOG:NOG237745 RefSeq:XP_645711.1 ProteinModelPortal:Q55BA1
EnsemblProtists:DDB0237560 GeneID:8617904 KEGG:ddi:DDB_G0271240
InParanoid:Q55BA1 OMA:KITKRPL Uniprot:Q55BA1
Length = 520
Score = 251 (93.4 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 105/453 (23%), Positives = 211/453 (46%)
Query: 123 ESDDEEEAWQKKPVWVDEEEEQTNVNIAKVNRLRKLRKEEDESLISGAEYVSRLRAQHVK 182
E +DE E +K EEEE+ + + N K+++ E+E + E + K
Sbjct: 57 EDEDENENSDEKINNTIEEEEEKEEKVEE-NEEEKIKENEEEKGDNNEEEEDEKIVKKTK 115
Query: 183 LNPGTEWAQLDSRSRDNDPYDESSDEETQAVVACGYEDTEAVDDILRTDEDLVVKSSAKL 242
++ + WA + + + S E + G +D E +++ ++++LV +
Sbjct: 116 VSNESAWADEEDVGKFKNRSLLSVTPEWAKIKEKGEDDKEE-ENVFNSNKNLVNNN---- 170
Query: 243 SPGLLEYSRLIDANADESSTGPINSVQFHRNAQLLLV--AGL----DRRLRFFQIDGKRN 296
E+ R++ S T + V + N + + G+ R + +I K+
Sbjct: 171 -----EF-RILQDRTRSSLTSKVTGVAYGSNGNVFMADSKGIFKVFSREIEASKIYDKQ- 223
Query: 297 TKIQSIFLEDCPVRKASFLPDGSQAIIAGRRK-FFYSLDLVKAKADKIGPL-VGRE--EK 352
+S F+ D + ++ ++ II G K ++++ D+ K K PL VG+ +K
Sbjct: 224 -LYESKFV-DFSITNLYYIEKSNEVIITGLDKEYYFTFDVKSEKITK-RPLRVGKNYLKK 280
Query: 353 SL---EFFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLKM-NGTVRSLAFADDGKQLL 408
S E+F +S DS+ G I+++S+ +K ++ ++M + + ++ F+ +GK LL
Sbjct: 281 SAISEEYFSIS-DST--------GRIMMISTASKTIVNEVRMPSAEITTMKFSSNGKILL 331
Query: 409 SSGGDGQVYHWDLRTRTCIHRAVDEGC--ING-TALCTSPDGTFFAAGSDSGIVNVYNRQ 465
S +G ++ +++ + + IH+ D G +N T + SP+G + GS SGI+N Y
Sbjct: 332 ISS-EGYIFCYNVDSMSMIHKFKDYGNFGLNSITTITCSPNGNYLVTGSQSGIINSYRFS 390
Query: 466 EFLGGKR-KPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSNWPP 524
+ + KP+K I+++ + ++F+ ++ +L S K S KLI PS+ F N+
Sbjct: 391 DCMEQTTPKPLKIIDSIVYPITGLEFSPNSLMLLASSEFDKLSSKLILYPSHQTFKNFKL 450
Query: 525 ANRNLQYPRCLDFSPGGGFMAVGNAAGKVFLYK 557
+ + + C FS + +G G + L +
Sbjct: 451 SCKVESF--C--FSQNSQRLLIGEEDGSLTLLR 479
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 162 (62.1 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 59/250 (23%), Positives = 107/250 (42%)
Query: 229 RTDEDLVV---KSSAKLSPGLLEYSRLIDANAD-ESSTGPINSVQFHRNAQLLLVAGLDR 284
R+ DL+ + A L G+ S L E G I + +FH +LLL +G DR
Sbjct: 18 RSKNDLMAYTNRDKALLESGVRRTSNLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDR 77
Query: 285 RLRFFQI-DGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIAGRRKFFYSLDLVKAKADKI 343
++ +Q+ + N + ++ V +A F PDGS K D+ + +
Sbjct: 78 QIYIWQVYEDCEN--VMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRR 135
Query: 344 GPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADD 403
G S++ ++ ++ I + ++ K TL+ V ++ F D
Sbjct: 136 FKGHGNFVNSVQGSRRG--QQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDT 193
Query: 404 GKQLLSSGGDGQVYHWDLRTRTCIHRAVDEG-CINGTALCTSPDGTFFAAGSDSGIVNVY 462
G+Q++S G D +V WD+R + +H I G +L SP+G F + + V+
Sbjct: 194 GEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSL--SPEGDFILTNAMDNTLRVW 251
Query: 463 NRQEFLGGKR 472
+ + + G+R
Sbjct: 252 DVRPYAPGER 261
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 169 (64.5 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 73/303 (24%), Positives = 138/303 (45%)
Query: 259 ESSTGPINSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDG 318
E+ GP+ SV F + + L+ D ++ + D +Q++ V +F PDG
Sbjct: 747 ENHLGPVESVVFSPDGKQLVSGSYDDTVKIW--DPATGELLQTLDGHSGTVESLAFSPDG 804
Query: 319 SQAIIAGRRKFFYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLV 378
+ + +G + ++DL + ++ S+ +PD +A ++ I +
Sbjct: 805 -KLLASG--SYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIW 861
Query: 379 SSKTKELIGTLKMNG-TVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVD--EGC 435
T EL TL + +VRS+AF+ DGK L SS D + W+ T + ++++ G
Sbjct: 862 DLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGE-LQQSLEGRSGW 920
Query: 436 INGTALCTSPDGTFFAAGSDSGIVNVYNRQEFLGGKRKPIKTIENLTTKVDFMKFNNDAQ 495
+ A SPDG A+GS+ V ++N G+ ++T+E + V + F+ D +
Sbjct: 921 VKSVAF--SPDGKKLASGSEKNTVKLWNPAT---GEL--LQTLEGHSQSVRSVAFSPDGK 973
Query: 496 ILAICSTMKKNSLKLIHIPSYNVFSNWPPANRNLQYPRCLDFSPGGGFMAVGNAAGKVFL 555
LA S+ ++KL + + + + +L + R + FSP G + G+ + L
Sbjct: 974 QLA--SSSSDTTIKLWNSTTGELQQTFK--GHDL-WIRAVAFSPDGKHLVSGSDDNTIKL 1028
Query: 556 YKL 558
+ L
Sbjct: 1029 WDL 1031
Score = 159 (61.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 65/254 (25%), Positives = 120/254 (47%)
Query: 259 ESSTGPINSVQFHRNAQLLLVAGLDRRLRFFQ-IDGKRNTKIQSIFLEDCPVRKASFLPD 317
+S + + SV F + +LL + LD ++ + G+ QS+ V+ +F PD
Sbjct: 873 DSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQ---QSLEGRSGWVKSVAFSPD 929
Query: 318 GSQAIIAGRRKFFYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILL 377
G + + +G K L A + + L G + S+ SPD +A ++ I L
Sbjct: 930 GKK-LASGSEKNTVKL-WNPATGELLQTLEGHSQ-SVRSVAFSPDGKQLASSSSDTTIKL 986
Query: 378 VSSKTKELIGTLKMNGT-VRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCI 436
+S T EL T K + +R++AF+ DGK L+S D + WDL T + +++++
Sbjct: 987 WNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSE-LQQSLEDHSR 1045
Query: 437 NGTALCTSPDGTFFAAGSDSGIVNVYNRQEFLGGKRKPIKTIENLTTKVDFMKFNNDAQI 496
+ A+ SPD A+ S + +++ G+ + +T+E + V + F+ D ++
Sbjct: 1046 SVHAVAFSPDDKQLASSSLDSTIKLWDSAT---GELQ--RTLEGHSQGVRSVTFSPDGKL 1100
Query: 497 LAICSTMKKNSLKL 510
LA S ++KL
Sbjct: 1101 LA--SNSYDGTIKL 1112
Score = 134 (52.2 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 71/287 (24%), Positives = 124/287 (43%)
Query: 283 DRRLRFFQIDGKRNTKIQSIFLEDCPVRKAS----FLPDGSQAIIAGRRKFFYSLDLVKA 338
D L F D +R E P++ S F P+GS RR F Y+L +
Sbjct: 676 DSELSKFLYDARRFVLNNRHLAETAPLQLYSSGLMFSPEGSIT----RRIFNYNLS-GWS 730
Query: 339 KADKIGPLVGREEKSLE-------FFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLK- 390
+ K+ E+++LE SPD + + + + T EL+ TL
Sbjct: 731 QLPKVEQTWSAEQQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDG 790
Query: 391 MNGTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCINGT-ALCTSPDGTF 449
+GTV SLAF+ DGK L S D + WD T + EG + ++ +PDG
Sbjct: 791 HSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTF--EGHPHSIWSVAFAPDGKE 848
Query: 450 FAAGSDSGIVNVYNRQEFLGGKRKPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLK 509
A+ SD + ++ + G+ + +T+++ + V + F+ D ++LA S+ +++K
Sbjct: 849 LASASDDSTIKIW---DLATGELQ--QTLDSHSQSVRSVAFSPDGKLLA--SSSLDSTIK 901
Query: 510 LIHIPSYNVFSNWPPANRNLQYPRCLDFSPGGGFMAVGNAAGKVFLY 556
+ + P+ + + + FSP G +A G+ V L+
Sbjct: 902 VWN-PATGELQQSLEGRSG--WVKSVAFSPDGKKLASGSEKNTVKLW 945
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 143 (55.4 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 54/210 (25%), Positives = 87/210 (41%)
Query: 233 DLVVKSSAKLSPGLLEYSRLIDANADES----STGPIN--SVQFHRNAQLLLVAGLDRRL 286
D+ S S L + RL D + GP++ S+ F ++Q L ++
Sbjct: 71 DISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKV 130
Query: 287 RFFQID-GKRNTKIQSIFLEDCPVRKASFLPDGSQAIIAGRRKFFYSLDLVKAKADKIGP 345
F ++ GK+ + + + ++ PDG D+ K +
Sbjct: 131 NIFGVETGKKEYSLDT---RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL--LHT 185
Query: 346 LVGREE--KSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLKMNGT-VRSLAFAD 402
L G +SL F SPDS ++ ++GYI + + L GTL +G+ V ++AF
Sbjct: 186 LEGHAMPIRSLTF---SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCP 242
Query: 403 DGKQLLSSGGDGQVYHWDLRTRTCIHRAVD 432
D +SS D V WD TRTC+H D
Sbjct: 243 DDTHFVSSSSDKSVKVWDAGTRTCVHTFFD 272
Score = 117 (46.2 bits), Expect = 0.00050, P = 0.00050
Identities = 54/237 (22%), Positives = 101/237 (42%)
Query: 267 SVQFHRNAQLLLVAGLDRRLRFFQID-GKRNTKIQSIFLEDCPVRKASFLPDGSQAIIAG 325
SV + + LD +R + ++ GK+ I+SI +F PD SQ + G
Sbjct: 69 SVDISHTGSIAASSSLDAHIRLWDLETGKQ---IKSIDAGPVDAWSLAFSPD-SQFLATG 124
Query: 326 RRKFFYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKEL 385
+++ + K + K + SPD +A +G I + T +L
Sbjct: 125 SH--VGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL 182
Query: 386 IGTLKMNGT-VRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGC-INGTALCT 443
+ TL+ + +RSL F+ D + L+++ DG + +D++ G + A C
Sbjct: 183 LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFC- 241
Query: 444 SPDGTFFAAGSDSGIVNVYNRQEFLGGKRKPIKTIENLTTKVDFMKFNND-AQILAI 499
PD T F + S V V++ G R + T + +V +K+N ++I+++
Sbjct: 242 -PDDTHFVSSSSDKSVKVWD-----AGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSV 292
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 143 (55.4 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 54/210 (25%), Positives = 87/210 (41%)
Query: 233 DLVVKSSAKLSPGLLEYSRLIDANADES----STGPIN--SVQFHRNAQLLLVAGLDRRL 286
D+ S S L + RL D + GP++ S+ F ++Q L ++
Sbjct: 71 DISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKV 130
Query: 287 RFFQID-GKRNTKIQSIFLEDCPVRKASFLPDGSQAIIAGRRKFFYSLDLVKAKADKIGP 345
F ++ GK+ + + + ++ PDG D+ K +
Sbjct: 131 NIFGVETGKKEYSLDT---RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL--LHT 185
Query: 346 LVGREE--KSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLKMNGT-VRSLAFAD 402
L G +SL F SPDS ++ ++GYI + + L GTL +G+ V ++AF
Sbjct: 186 LEGHAMPIRSLTF---SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCP 242
Query: 403 DGKQLLSSGGDGQVYHWDLRTRTCIHRAVD 432
D +SS D V WD TRTC+H D
Sbjct: 243 DDTHFVSSSSDKSVKVWDAGTRTCVHTFFD 272
Score = 117 (46.2 bits), Expect = 0.00050, P = 0.00050
Identities = 54/237 (22%), Positives = 101/237 (42%)
Query: 267 SVQFHRNAQLLLVAGLDRRLRFFQID-GKRNTKIQSIFLEDCPVRKASFLPDGSQAIIAG 325
SV + + LD +R + ++ GK+ I+SI +F PD SQ + G
Sbjct: 69 SVDISHTGSIAASSSLDAHIRLWDLETGKQ---IKSIDAGPVDAWSLAFSPD-SQFLATG 124
Query: 326 RRKFFYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKEL 385
+++ + K + K + SPD +A +G I + T +L
Sbjct: 125 SH--VGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL 182
Query: 386 IGTLKMNGT-VRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGC-INGTALCT 443
+ TL+ + +RSL F+ D + L+++ DG + +D++ G + A C
Sbjct: 183 LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFC- 241
Query: 444 SPDGTFFAAGSDSGIVNVYNRQEFLGGKRKPIKTIENLTTKVDFMKFNND-AQILAI 499
PD T F + S V V++ G R + T + +V +K+N ++I+++
Sbjct: 242 -PDDTHFVSSSSDKSVKVWD-----AGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSV 292
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 51/208 (24%), Positives = 93/208 (44%)
Query: 263 GPIN--SVQFHRNAQLLLVAGLDRRLRFFQID-GKRNTKIQSIFLEDCPVRKASFLPDGS 319
GP++ SV F ++Q L ++ F ++ GK+ + + + ++ PDG
Sbjct: 105 GPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDT---RGKFILSIAYSPDGK 161
Query: 320 QAIIAGRRKFFYSLDLVKAKADKIGPLVGREE--KSLEFFEVSPDSSVIAFVGNEGYILL 377
D+ K + L G +SL F SPDS ++ ++GYI +
Sbjct: 162 YLASGAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTF---SPDSQLLVTASDDGYIKI 216
Query: 378 VSSKTKELIGTLKMNGT-VRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVD-EGC 435
+ L TL +G+ V ++AF+ D +SS D V WD+ RTC+H +D +
Sbjct: 217 YEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQ 276
Query: 436 INGTALCTSPDGTFFAAGSDSGIVNVYN 463
+ G + +G+ + +D ++VY+
Sbjct: 277 VWGVKY--NKNGSKIVSVADDQEIHVYD 302
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 138 (53.6 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 63/266 (23%), Positives = 97/266 (36%)
Query: 265 INSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIA 324
+ SVQF + LL A DR +R + I KR K PVR F DG A
Sbjct: 21 VTSVQFSPHGNLLASASRDRTVRLW-IPDKRG-KFSEFKAHTAPVRSVDFSADGQFLATA 78
Query: 325 GRRKFFYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKE 384
K S+ + + + R + + SPD +I + I + + K+
Sbjct: 79 SEDK---SIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 135
Query: 385 LIGTLKMN-GTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCI-HRAVDEGCINGTALC 442
+ + G + F G + S+G D V WD+R + H V G +N +
Sbjct: 136 CVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVN--CIS 193
Query: 443 TSPDGTFFAAGSDSGIVNVYNRQE-----FLGGKRKPIKTIENLTTKVDFMKFNNDAQIL 497
P G + S G + + + E L G P+ T+ F D Q+L
Sbjct: 194 FHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 253
Query: 498 AI--------CSTMKKNSLKLIHIPS 515
C + K +LK +H S
Sbjct: 254 LWRTNFDELHCKGLTKRNLKRLHFDS 279
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 139 (54.0 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 37/106 (34%), Positives = 55/106 (51%)
Query: 360 SPDSSVIAFVGNEGYILLVSSKTKELIGTLKMNGT-VRSLAFADDGKQLLSSGGDGQVYH 418
SPD ++A + I + TK +I L+ + + SL F DG +L+S GD V
Sbjct: 264 SPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRI 323
Query: 419 WDLRTRTC-IHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYN 463
WDLRT C + ++++G T + SPDG AAGS V V++
Sbjct: 324 WDLRTSQCSLTLSIEDGV---TTVAVSPDGKLIAAGSLDRTVRVWD 366
Score = 121 (47.7 bits), Expect = 0.00044, P = 0.00044
Identities = 58/231 (25%), Positives = 99/231 (42%)
Query: 250 SRLIDA----NADESSTGP----INSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQS 301
++LID N D+++T I SV F + +LL D+ +R + + KR KI
Sbjct: 235 AKLIDESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILR 294
Query: 302 IFLEDCPVRKASFLPDGSQAIIAGRRKFFYSLDLVKAKADKIGPLVGREEKSLEFFEVSP 361
+D + F PDG + + + DL ++ L E + VSP
Sbjct: 295 GHEQD--IYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCS----LTLSIEDGVTTVAVSP 348
Query: 362 DSSVIAFVGNEGYILLVSSKTKELI-----GTLKMNG---TVRSLAFADDGKQLLSSGGD 413
D +IA + + + S T L+ G NG +V S+AF+++G+Q+ S D
Sbjct: 349 DGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLD 408
Query: 414 GQVYHWDLRTRTCIHRAVDEGCINGT----ALCTSPDGTFFAAGS-DSGIV 459
V W L ++ + I ++C +PD + +GS D G++
Sbjct: 409 RTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVI 459
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 139 (54.0 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 37/106 (34%), Positives = 55/106 (51%)
Query: 360 SPDSSVIAFVGNEGYILLVSSKTKELIGTLKMNGT-VRSLAFADDGKQLLSSGGDGQVYH 418
SPD ++A + I + TK +I L+ + + SL F DG +L+S GD V
Sbjct: 264 SPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRI 323
Query: 419 WDLRTRTC-IHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYN 463
WDLRT C + ++++G T + SPDG AAGS V V++
Sbjct: 324 WDLRTSQCSLTLSIEDGV---TTVAVSPDGKLIAAGSLDRTVRVWD 366
Score = 121 (47.7 bits), Expect = 0.00044, P = 0.00044
Identities = 58/231 (25%), Positives = 99/231 (42%)
Query: 250 SRLIDA----NADESSTGP----INSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQS 301
++LID N D+++T I SV F + +LL D+ +R + + KR KI
Sbjct: 235 AKLIDESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILR 294
Query: 302 IFLEDCPVRKASFLPDGSQAIIAGRRKFFYSLDLVKAKADKIGPLVGREEKSLEFFEVSP 361
+D + F PDG + + + DL ++ L E + VSP
Sbjct: 295 GHEQD--IYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCS----LTLSIEDGVTTVAVSP 348
Query: 362 DSSVIAFVGNEGYILLVSSKTKELI-----GTLKMNG---TVRSLAFADDGKQLLSSGGD 413
D +IA + + + S T L+ G NG +V S+AF+++G+Q+ S D
Sbjct: 349 DGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLD 408
Query: 414 GQVYHWDLRTRTCIHRAVDEGCINGT----ALCTSPDGTFFAAGS-DSGIV 459
V W L ++ + I ++C +PD + +GS D G++
Sbjct: 409 RTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVI 459
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 138 (53.6 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 63/266 (23%), Positives = 97/266 (36%)
Query: 265 INSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIA 324
+ SVQF + LL A DR +R + I KR K PVR F DG A
Sbjct: 63 VTSVQFSPHGNLLASASRDRTVRLW-IPDKRG-KFSEFKAHTAPVRSVDFSADGQFLATA 120
Query: 325 GRRKFFYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKE 384
K S+ + + + R + + SPD +I + I + + K+
Sbjct: 121 SEDK---SIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 177
Query: 385 LIGTLKMN-GTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCI-HRAVDEGCINGTALC 442
+ + G + F G + S+G D V WD+R + H V G +N +
Sbjct: 178 CVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVN--CIS 235
Query: 443 TSPDGTFFAAGSDSGIVNVYNRQE-----FLGGKRKPIKTIENLTTKVDFMKFNNDAQIL 497
P G + S G + + + E L G P+ T+ F D Q+L
Sbjct: 236 FHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 295
Query: 498 AI--------CSTMKKNSLKLIHIPS 515
C + K +LK +H S
Sbjct: 296 LWRTNFDELHCKGLTKRNLKRLHFDS 321
>WB|WBGene00016374 [details] [associations]
symbol:swd-2.2 species:6239 "Caenorhabditis elegans"
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0043652 "engulfment of apoptotic
cell" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
GO:GO:0040035 GO:GO:0043652 EMBL:FO080768 KO:K14962
HOGENOM:HOG000176477 GeneTree:ENSGT00530000063965 OMA:CTNMAFW
PIR:T34139 RefSeq:NP_501280.1 ProteinModelPortal:Q18403 SMR:Q18403
STRING:Q18403 PaxDb:Q18403 EnsemblMetazoa:C33H5.7 GeneID:177561
KEGG:cel:CELE_C33H5.7 UCSC:C33H5.7 CTD:177561 WormBase:C33H5.7
InParanoid:Q18403 NextBio:897372 Uniprot:Q18403
Length = 326
Score = 135 (52.6 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 45/162 (27%), Positives = 77/162 (47%)
Query: 402 DDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCIN--GTALCT-SPDGTFFAAGSDSGI 458
DD LS D + WDL+T CI G +N T + T P+G FAAG D+ I
Sbjct: 124 DD--MFLSVAEDKTIRLWDLKTHNCI------GLMNLSATPIATFDPEGLLFAAGLDNNI 175
Query: 459 VNVYNRQEFLGGKRKPIKTIENLTTKVDF--MKFNNDAQILAICSTMKKNSLKLIHIPSY 516
+ +Y+ + F G +EN V++ M+F+ + + IC+ NS +L+ + ++
Sbjct: 176 IKLYDLRSFDKGPFSSFGPLEN-EDNVEWTAMRFSPCGKYIMICT----NSSQLLLVDAF 230
Query: 517 NVFSNWP-PANRNLQ-YPRCLDFSPGGGFMAVGNAAGKVFLY 556
+ ++N Q P F+P + VG++ G ++ Y
Sbjct: 231 TGLIKFTLEEHQNAQKIPLMASFTPESSHIMVGSSDGYIYFY 272
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 133 (51.9 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 263 GPINS--VQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQ 320
GP+++ + F ++Q L ++ F ++ + K S+ + ++ PDG
Sbjct: 105 GPVDAWTLAFSPDSQYLATGTHMGKVNIFGVESGK--KEYSLDTRGKFILSIAYSPDGKY 162
Query: 321 AIIAGRRKFFYSLDLVKAKADKIGPLVGREE--KSLEFFEVSPDSSVIAFVGNEGYILLV 378
D+ K + L G +SL F SPDS ++ ++GYI +
Sbjct: 163 LASGAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTF---SPDSQLLVTASDDGYIKIY 217
Query: 379 SSKTKELIGTLKMNGT-VRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVD 432
+ L GTL + + V ++AF D +SS D V WD+ TRTCIH D
Sbjct: 218 DVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFD 272
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 132 (51.5 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 45/175 (25%), Positives = 76/175 (43%)
Query: 263 GPINS--VQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQ 320
GP+++ + F ++Q L ++ F ++ + K S+ + ++ PDG
Sbjct: 87 GPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK--KEYSLDTRGKFILSIAYSPDGKY 144
Query: 321 AIIAGRRKFFYSLDLVKAKADKIGPLVGREE--KSLEFFEVSPDSSVIAFVGNEGYILLV 378
D+ K + L G +SL F SPDS ++ ++GYI +
Sbjct: 145 LASGAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTF---SPDSQLLVTASDDGYIKIY 199
Query: 379 SSKTKELIGTLKMNGT-VRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVD 432
+ L GTL + + V ++AF D +SS D V WD+ TRTC+H D
Sbjct: 200 DVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD 254
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 136 (52.9 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 66/268 (24%), Positives = 98/268 (36%)
Query: 265 INSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIA 324
+ SVQF LL A DR +R + I KR K PVR F DG A
Sbjct: 63 VTSVQFSPLGNLLASASRDRTVRLW-IPDKRG-KSSEFKAHTAPVRSVDFSADGQFLATA 120
Query: 325 GRRKFFYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKE 384
K S+ + + + R + + SPD +I + I + + K+
Sbjct: 121 SEDK---SIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 177
Query: 385 LIGTLKMN-GTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCI-HRAVDEGCINGTALC 442
+ + G + F +G + S+G D V WD+R + H V G +N C
Sbjct: 178 CVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVN----C 233
Query: 443 TS--PDGTFFAAGSDSGIVNVYNRQE-----FLGGKRKPIKTIENLTTKVDFMKFNNDAQ 495
S P G + S G + + + E L G P+ T+ F D Q
Sbjct: 234 VSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQ 293
Query: 496 ILAI--------CSTMKKNSLKLIHIPS 515
+L C M K +LK +H S
Sbjct: 294 VLLWRTNFDYLNCKDMIKRNLKRLHFDS 321
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 132 (51.5 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 45/175 (25%), Positives = 76/175 (43%)
Query: 263 GPINS--VQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQ 320
GP+++ + F ++Q L ++ F ++ + K S+ + ++ PDG
Sbjct: 105 GPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK--KEYSLDTRGKFILSIAYSPDGKY 162
Query: 321 AIIAGRRKFFYSLDLVKAKADKIGPLVGREE--KSLEFFEVSPDSSVIAFVGNEGYILLV 378
D+ K + L G +SL F SPDS ++ ++GYI +
Sbjct: 163 LASGAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTF---SPDSQLLVTASDDGYIKIY 217
Query: 379 SSKTKELIGTLKMNGT-VRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVD 432
+ L GTL + + V ++AF D +SS D V WD+ TRTC+H D
Sbjct: 218 DVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD 272
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 45/175 (25%), Positives = 76/175 (43%)
Query: 263 GPINS--VQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQ 320
GP+++ + F ++Q L ++ F ++ + K S+ + ++ PDG
Sbjct: 105 GPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK--KEYSLDTRGKFILSIAYSPDGKY 162
Query: 321 AIIAGRRKFFYSLDLVKAKADKIGPLVGREE--KSLEFFEVSPDSSVIAFVGNEGYILLV 378
D+ K + L G +SL F SPDS ++ ++GYI +
Sbjct: 163 LASGAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTF---SPDSQLLVTASDDGYIKIY 217
Query: 379 SSKTKELIGTLKMNGT-VRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVD 432
+ L GTL + + V ++AF D +SS D V WD+ TRTC+H D
Sbjct: 218 DVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD 272
Score = 115 (45.5 bits), Expect = 0.00084, P = 0.00084
Identities = 53/236 (22%), Positives = 101/236 (42%)
Query: 267 SVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIAGR 326
SV + + LD +R + +D + +I+SI +F PD SQ + G
Sbjct: 69 SVDISHTLPIAASSSLDAHIRLWDLDNGK--QIKSIDAGPVDAWTLAFSPD-SQYLATGT 125
Query: 327 RKFFYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKELI 386
+++ ++ K + K + SPD +A +G I + T +L+
Sbjct: 126 H--VGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLL 183
Query: 387 GTLKMNGT-VRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGC-INGTALCTS 444
TL+ + +RSL F+ D + L+++ DG + +D++ + A C
Sbjct: 184 HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC-- 241
Query: 445 PDGTFFAAGSDSGIVNVYNRQEFLGGKRKPIKTIENLTTKVDFMKFN-NDAQILAI 499
PD T F + S V V++ G R + T + +V +K+N N ++I+++
Sbjct: 242 PDDTHFVSSSSDKSVKVWDV-----GTRTCVHTFFDHQDQVWGVKYNGNGSKIVSV 292
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 45/175 (25%), Positives = 76/175 (43%)
Query: 263 GPINS--VQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQ 320
GP+++ + F ++Q L ++ F ++ + K S+ + ++ PDG
Sbjct: 105 GPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK--KEYSLDTRGKFILSIAYSPDGKY 162
Query: 321 AIIAGRRKFFYSLDLVKAKADKIGPLVGREE--KSLEFFEVSPDSSVIAFVGNEGYILLV 378
D+ K + L G +SL F SPDS ++ ++GYI +
Sbjct: 163 LASGAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTF---SPDSQLLVTASDDGYIKIY 217
Query: 379 SSKTKELIGTLKMNGT-VRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVD 432
+ L GTL + + V ++AF D +SS D V WD+ TRTC+H D
Sbjct: 218 DVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD 272
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 45/175 (25%), Positives = 76/175 (43%)
Query: 263 GPINS--VQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQ 320
GP+++ + F ++Q L ++ F ++ + K S+ + ++ PDG
Sbjct: 105 GPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK--KEYSLDTRGKFILSIAYSPDGKY 162
Query: 321 AIIAGRRKFFYSLDLVKAKADKIGPLVGREE--KSLEFFEVSPDSSVIAFVGNEGYILLV 378
D+ K + L G +SL F SPDS ++ ++GYI +
Sbjct: 163 LASGAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTF---SPDSQLLVTASDDGYIKIY 217
Query: 379 SSKTKELIGTLKMNGT-VRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVD 432
+ L GTL + + V ++AF D +SS D V WD+ TRTC+H D
Sbjct: 218 DVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD 272
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 46/206 (22%), Positives = 90/206 (43%)
Query: 263 GPINS--VQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQ 320
GP+++ V F +++ + ++ F ++ + K S+ + ++ PDG
Sbjct: 105 GPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGK--KEHSLDTRGKFILSIAYSPDGKY 162
Query: 321 AIIAGRRKFFYSLDLVKAKADKIGPLVGREE--KSLEFFEVSPDSSVIAFVGNEGYILLV 378
D+ K + L G +SL F SPDS ++ ++GYI +
Sbjct: 163 LASGAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTF---SPDSQLLVTASDDGYIKIY 217
Query: 379 SSKTKELIGTLKMNGT-VRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCIN 437
+ L GTL +G+ V S+AF+ D +SS D + WD +R+C++ D
Sbjct: 218 DVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQD-Q 276
Query: 438 GTALCTSPDGTFFAAGSDSGIVNVYN 463
++ +P G+ + D +++Y+
Sbjct: 277 VWSVKYNPTGSKIVSAGDDRAIHIYD 302
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 64/281 (22%), Positives = 109/281 (38%)
Query: 262 TGPINSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQA 321
T I V F + L+ + D+ +R + K + + VR F DG +
Sbjct: 60 TDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKA--HTASVRSVHFSRDGQRL 117
Query: 322 IIAGRRKFFYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSK 381
+ A K S+ + + K + R + SPD +IA G++ + L +
Sbjct: 118 VTASDDK---SVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTS 174
Query: 382 TKELIGTLK-MNGTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCI-HRAVDEGCINGT 439
+ + I G+ + F G + SSG D + WD+RT I H V +N
Sbjct: 175 SHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVN-- 232
Query: 440 ALCTSPDGTFFAAGSDSGIVNVYNRQE-----FLGGKRKPIKTIENLTTKVD-FMKFNND 493
P G + +GS + + + E L G + P+ T+ + D F D
Sbjct: 233 CFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTV-TFSRDGDLFASGGAD 291
Query: 494 AQILAICSTMKK-NSLKLIHIPSYNVFSNWPPANRNLQYPR 533
+Q+L + N +L+ S V + PP ++ YPR
Sbjct: 292 SQVLMWKTNFDSLNYRELLSKHSKRVTPDPPPHLMDI-YPR 331
>FB|FBgn0039867 [details] [associations]
symbol:CstF-50 "CstF-50" species:7227 "Drosophila
melanogaster" [GO:0005848 "mRNA cleavage stimulating factor
complex" evidence=ISS] [GO:0006379 "mRNA cleavage" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006379 KO:K14406
OMA:LYDHTDE GeneTree:ENSGT00700000104487 HSSP:P46680 GO:GO:0005848
FlyBase:FBgn0039867 NextBio:835499 EMBL:AY094802 RefSeq:NP_651883.1
UniGene:Dm.11654 SMR:Q9V9V0 IntAct:Q9V9V0 MINT:MINT-287008
STRING:Q9V9V0 EnsemblMetazoa:FBtr0085865 GeneID:43734
KEGG:dme:Dmel_CG2261 UCSC:CG2261-RA CTD:43734 InParanoid:Q9V9V0
GenomeRNAi:43734 Uniprot:Q9V9V0
Length = 424
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 68/288 (23%), Positives = 113/288 (39%)
Query: 142 EEQTNVNIAKVNRLRKLRKEEDESLISGAEYVSRLRAQHVKLNPGT-EWAQLDSRSRDND 200
E +V IA + L K + ++ G + A + P + E A + S +
Sbjct: 51 ERLLHVMIAGMQTLSDKDKTNSDDVLPGIDLEFEPEASALAPEPHSYETAYVTSHKQACR 110
Query: 201 PYDESSDEETQAVVACGYEDTEAVDDILRTDEDLVVKSSAKLSPGLLEYSRLIDANADES 260
S D ++VA G D IL + L + + PG + + +
Sbjct: 111 AGAFSCDG---SLVATGSVDASI--KILDVERMLAKSAPEDIEPGREQQGHPVIRTLYDH 165
Query: 261 STGPINSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDC-PVRKASFLPDGS 319
T ++ ++FH +L A D ++ F I K +F DC PV SF P G
Sbjct: 166 -TDEVSYLEFHPKEHILASASRDGTVKLFDIAKPSVKKAHKVFT-DCEPVLCLSFHPTGD 223
Query: 320 QAIIAGRRKFFYSLDLVKAKADKIGPLVGREEKS-LEFFEVSPDSSVIAFVGNEGYILLV 378
I D+ + + + ++ K+ + + SP + A +G I +
Sbjct: 224 YVAIGTEHNVLRVYDVATTQCF-VSAIPSQQHKAGVTCVKYSPTGKLYATGSYDGDIKIW 282
Query: 379 SSKTKELIGTL-KMNG--TVRSLAFADDGKQLLSSGGDGQVYHWDLRT 423
+ I T+ + +G + SL F +GK LLSSG D VY W+L T
Sbjct: 283 DGISGRCINTIAEAHGGAAICSLEFTRNGKYLLSSGMDSLVYLWELCT 330
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 263 GPINS--VQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQ 320
GP+++ + F ++Q L ++ F ++ + K S+ + ++ PDG
Sbjct: 105 GPVDAWTLAFSPDSQHLATGTHMGKVNIFGVESGK--KEYSLDTRGKFILSIAYSPDGKY 162
Query: 321 AIIAGRRKFFYSLDLVKAKADKIGPLVGREE--KSLEFFEVSPDSSVIAFVGNEGYILLV 378
D+ K + L G +SL F SPDS ++ ++GYI +
Sbjct: 163 LASGAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTF---SPDSQLLVTASDDGYIKIY 217
Query: 379 SSKTKELIGTLKMNGT-VRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVD 432
+ L GTL + + V ++AF D +SS D V WD+ TRTCIH D
Sbjct: 218 DVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFD 272
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 53/211 (25%), Positives = 96/211 (45%)
Query: 261 STGPIN--SVQFHRNAQLLLVAGL-DRRLRFFQID-GKRNTKIQSIFLEDCPVRKASFLP 316
S GP++ +VQF +++GL D ++ + ++ GK + + ++ P
Sbjct: 124 SFGPVDLWTVQFSP-CNKYVISGLNDGKISMYSVETGKAEQTLDA--QNGKYTLSIAYSP 180
Query: 317 DGSQAIIAGRRKFFYSL-DLVKAKADKIGPLVGREE--KSLEFFEVSPDSSVIAFVGNEG 373
DG I +G ++ D+ K + L G +SL F SP+S ++ ++G
Sbjct: 181 DGKY-IASGAIDGIITIFDVAAGKV--VQTLEGHAMPVRSLCF---SPNSQLLLTASDDG 234
Query: 374 YILLVSSKTKELIGTLKMNGT-VRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVD 432
++ L +++GTL + + V +AF++DGK SS D V WD R C+H +
Sbjct: 235 HMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAE 294
Query: 433 E-GCINGTALCTSPDGTFFAAGSDSGIVNVY 462
+ G SP A+ S+ +N+Y
Sbjct: 295 HTDQVWGVRY--SPGNDKVASASEDKSLNIY 323
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 62/266 (23%), Positives = 96/266 (36%)
Query: 265 INSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIA 324
+ SVQF + LL A DR +R + I KR K PVR F DG A
Sbjct: 63 VTSVQFSPHGNLLASASRDRTVRLW-IPDKRG-KFSEFKAHTAPVRSVDFSADGQFLATA 120
Query: 325 GRRKFFYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKE 384
K S+ + + + R + + SPD +I + I + + K+
Sbjct: 121 SEDK---SIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 177
Query: 385 LIGTLKMN-GTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCI-HRAVDEGCINGTALC 442
+ + G + F G + S+G D V WD+R + H V G +N +
Sbjct: 178 CVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVN--CIS 235
Query: 443 TSPDGTFFAAGSDSGIVNVYNRQE-----FLGGKRKPIKTIENLTTKVDFMKFNNDAQIL 497
P + S G + + + E L G P+ T+ F D Q+L
Sbjct: 236 FHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 295
Query: 498 AI--------CSTMKKNSLKLIHIPS 515
C + K +LK +H S
Sbjct: 296 LWRTNFDELHCKGLNKRNLKRLHFDS 321
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 129 (50.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 45/176 (25%), Positives = 77/176 (43%)
Query: 263 GPIN--SVQFHRNAQLLLVAGLDRRLRFFQID-GKRNTKIQSIFLEDCPVRKASFLPDGS 319
GP++ SV F ++Q L ++ F ++ GK+ + + + ++ PDG
Sbjct: 105 GPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDT---RGKFILSIAYSPDGK 161
Query: 320 QAIIAGRRKFFYSLDLVKAKADKIGPLVGREE--KSLEFFEVSPDSSVIAFVGNEGYILL 377
D+ K + L G +SL F S DS ++ ++GYI +
Sbjct: 162 YLASGAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTF---STDSQLLVTASDDGYIKI 216
Query: 378 VSSKTKELIGTLKMNGT-VRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVD 432
+ L TL +G+ V ++AF+ D +SS D V WD+ RTC+H +D
Sbjct: 217 YDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLD 272
>RGD|1310631 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000421 "autophagic vacuole
membrane" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005776 "autophagic vacuole" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310631 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
IPI:IPI00766621 ProteinModelPortal:D3ZLV2
Ensembl:ENSRNOT00000056840 UCSC:RGD:1310631 ArrayExpress:D3ZLV2
Uniprot:D3ZLV2
Length = 605
Score = 91 (37.1 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 40/178 (22%), Positives = 78/178 (43%)
Query: 392 NGTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCINGTALCTSPDGTFFA 451
+G V S F D +++S D + WDLR++ C + C+ T T FA
Sbjct: 389 SGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVC--EEMQSLCVLMTFAFLLGIKTVFA 446
Query: 452 AGSDSGIVNV--------YNRQ-EFLGGKRKPIKTIENLTTKVDFMKFNNDAQILAICST 502
S + IV ++++ F + + + L K+ + N + L CS
Sbjct: 447 GSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESVVREMELLGKITALDLNPERTELLSCS- 505
Query: 503 MKKNSLKLIHIPSYNVFSNW--PPANRNLQYPRCLDFSPGGGFMAVGNAAGKVFLYKL 558
+ + LK+I + + + ++ P + R + FSP G ++A G+A G ++++ +
Sbjct: 506 -RDDLLKIIDLRTNAIKQSFSAPGFKCGSDWTRVV-FSPDGSYVAAGSADGSLYVWSV 561
Score = 88 (36.0 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 54/223 (24%), Positives = 97/223 (43%)
Query: 84 KEDEEKVQPEAETGSAVYFV-DPSANSM-LSVNEEDAQFSGES-DDEEEAWQKKPVWVDE 140
++D+E EA+ + + D A+ + L +D + + ++ DE +A Q ++E
Sbjct: 119 QKDKEIQTNEAKIAECLQTISDLEADCLDLRTKLQDLEVANQTLKDEYDALQITFTALEE 178
Query: 141 E-EEQTNVNIAKVNRLRKLRKEEDESLISGAEYVSRLRAQHVKLNPGTEWAQLDSRSRDN 199
+ + T N V R + +E L + E SR R ++ + +D+
Sbjct: 179 KLRKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDD 238
Query: 200 DP---YDESSD--EETQAVVACGYEDTEAVDDILRTDEDLVVK--SSAKLSPGLLEYSRL 252
D DE+SD EET V A T + +D+V +S K S +
Sbjct: 239 DIEVIVDETSDHTEETSPVRAISRAATRRSVSSIPVPQDVVDTHPASGKDVRVPTTASYV 298
Query: 253 IDANADESSTGPINSVQFHRNAQLLLVAGLDRRLRFFQIDGKR 295
DA+ G +N+VQF ++LL G+DRR++ ++ G +
Sbjct: 299 FDAH-----DGEVNAVQFSPGSRLLATGGMDRRVKLWEAFGDK 336
>UNIPROTKB|B4GMG4 [details] [associations]
symbol:GL12389 "WD repeat-containing protein 55 homolog"
species:7234 "Drosophila persimilis" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH479185 OrthoDB:EOG4C2FS9
RefSeq:XP_002019404.1 ProteinModelPortal:B4GMG4
EnsemblMetazoa:FBtr0178004 GeneID:6594719 KEGG:dpe:Dper_GL12389
FlyBase:FBgn0149996 Uniprot:B4GMG4
Length = 503
Score = 124 (48.7 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 47/209 (22%), Positives = 91/209 (43%)
Query: 361 PDSSVIAFVGNEGYILLVS--SKTKELIGTLKMNGTV-RSLAFADDGKQLLSSGGDGQVY 417
PD +IA G + L ++ +L+ T++++ R + F +DG+ LL++ D V
Sbjct: 169 PDRDIIALATIIGDVHLYEYGNEGNKLLRTIEVHSKACRDVEFTEDGRYLLTASKDKCVM 228
Query: 418 HWDLRTRTC--IHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQEFLGGKRKPI 475
DL T ++ + IN + D FA G D+G V +++ + + PI
Sbjct: 229 VTDLETEKLKKLYETAHDDAINKLHVL---DENLFATGDDAGTVKLWDLRT-----KNPI 280
Query: 476 KTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSNWPPANRNLQYPRCL 535
++ + ++ M N+ ++L +T L +I + ++ P L C+
Sbjct: 281 FELKEVEDQITQMITNDQKKLLL--ATSADGYLTTFNIAARKLYVQSEPYEEELN---CM 335
Query: 536 DFSPGGGFMAVGNAAGKVFLYKLNH--YH 562
G + VG + GK++ Y + YH
Sbjct: 336 GIYRGSSKLVVGTSKGKLYSYNWGYFGYH 364
Score = 51 (23.0 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 12/55 (21%), Positives = 29/55 (52%)
Query: 220 DTEAVDDILRTDEDLVVKSSAKLSPGLLEYSRLIDANADESSTGPINSVQFHRNA 274
D + +DD+ D+D+V+ +++ L + D++ DE + + + ++NA
Sbjct: 12 DADELDDL---DDDMVIGVIEEIAQEALVGEDVSDSDIDEHDLADVGAPEHNQNA 63
>UNIPROTKB|P73594 [details] [associations]
symbol:slr1409 "Uncharacterized WD repeat-containing
protein slr1409" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S77304 RefSeq:NP_440958.1
RefSeq:YP_005651017.1 ProteinModelPortal:P73594 STRING:P73594
GeneID:12255183 GeneID:954268 KEGG:syn:slr1409 KEGG:syy:SYNGTS_1064
PATRIC:23839190 OMA:CCNFSPQ ProtClustDB:CLSK501008 Uniprot:P73594
Length = 326
Score = 127 (49.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 61/247 (24%), Positives = 107/247 (43%)
Query: 264 PINSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAII 323
P+ + + + Q+L+ G D +R + + G+ + Q V A F PD SQ I+
Sbjct: 92 PMFNARLSPDRQILITTGYDGTIRLWNLQGELLEEQQP---HRAAVADAIFSPD-SQIIV 147
Query: 324 A----GRRKFFYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVS 379
G+ K F A K G ++L + P +IA V + G + L++
Sbjct: 148 TCSDDGQTKIFTRQGQEIASVLKSGTA-----RNLAYH---PQGLLIASVSDSGSLHLIN 199
Query: 380 --SKTKELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIH--RAVDEGC 435
K + I T + G + ++ F+ +G+QLL+SG +G W+L IH + V G
Sbjct: 200 PNGKIEREISTGQ--GRINNVNFSPNGEQLLTSGINGSAKLWNLAGEL-IHEYKVVPTGW 256
Query: 436 INGTALCTSPDGTFFAAGSDSGIVNVYNRQEFLGGKRKPIKTIENLTTKVDFMKFNNDAQ 495
+N P G + A SD G + + + L I + + ++ + F+ D +
Sbjct: 257 VNSAQFY--PKGEWLATASDDGTIRFWQKDGQL------IYELPLVNARLTSLSFSPDGK 308
Query: 496 ILAICST 502
LA S+
Sbjct: 309 QLAATSS 315
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 125 (49.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 48/229 (20%), Positives = 88/229 (38%)
Query: 276 LLLVAGLDRRLRFFQ-IDGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIAGRRKF-FYSL 333
+L+ AG D +RF++ + G + IQ D V + D AG + Y
Sbjct: 4 ILVSAGYDHTIRFWEALTGVCSRTIQH---SDSQVNRLEITNDKKLLATAGHQNVRLY-- 58
Query: 334 DLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLKMNG 393
D+ + + G ++ D+ + +G I + ++ + K N
Sbjct: 59 DIRTTNPNPVASFEGHRG-NVTSVSFQQDNRWMVTSSEDGTIKVWDVRSPSIPRNYKHNA 117
Query: 394 TVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCINGTALCTSPDGTFFAAG 453
V + + +L+S DG + WDL C H+ E + +L + DG+ AA
Sbjct: 118 PVNEVVIHPNQGELISCDRDGNIRIWDLGENQCTHQLTPEDDTSLQSLSMASDGSMLAAA 177
Query: 454 SDSGIVNVYNRQEFLGGKR-KPIKTIENLTTKVDFMKFNNDAQILAICS 501
+ G V+ KP+ +T + + ++D + LA CS
Sbjct: 178 NTKGNCYVWEMPNHTDASHLKPVTKFRAHSTYITRILLSSDVKHLATCS 226
>UNIPROTKB|Q96J01 [details] [associations]
symbol:THOC3 "THO complex subunit 3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006406 "mRNA export from nucleus" evidence=IDA] [GO:0000346
"transcription export complex" evidence=IDA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
KO:K12880 GO:GO:0003723 GO:GO:0000346 GO:GO:0046784 CTD:84321
HOVERGEN:HBG059732 InterPro:IPR011659 Pfam:PF07676 EMBL:AC138965
EMBL:BC006849 EMBL:BC068499 IPI:IPI00063729 RefSeq:NP_115737.1
UniGene:Hs.484227 UniGene:Hs.715943 ProteinModelPortal:Q96J01
SMR:Q96J01 IntAct:Q96J01 STRING:Q96J01 PhosphoSite:Q96J01
DMDM:48474597 PaxDb:Q96J01 PRIDE:Q96J01 DNASU:84321
Ensembl:ENST00000265097 GeneID:84321 KEGG:hsa:84321 UCSC:uc003mdg.4
GeneCards:GC05M175344 HGNC:HGNC:19072 HPA:HPA042764 HPA:HPA044009
HPA:HPA045071 MIM:606929 neXtProt:NX_Q96J01 PharmGKB:PA134893535
HOGENOM:HOG000264781 InParanoid:Q96J01 OMA:LAYACDD
OrthoDB:EOG49ZXPJ PhylomeDB:Q96J01 ChiTaRS:THOC3 GenomeRNAi:84321
NextBio:74048 ArrayExpress:Q96J01 Bgee:Q96J01 CleanEx:HS_THOC3
Genevestigator:Q96J01 GermOnline:ENSG00000051596 Uniprot:Q96J01
Length = 351
Score = 122 (48.0 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 40/152 (26%), Positives = 64/152 (42%)
Query: 408 LSSGGDGQVYHWDLRTRTCIHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQEF 467
+++ GD + WD+RT CI +G +C SPDG A G+ +V F
Sbjct: 116 VTASGDKTIRIWDVRTTKCIATVNTKG--ENINICWSPDGQTIAVGNKDDVVT------F 167
Query: 468 LGGKRKPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSNWPPANR 527
+ K K E +V+ + +NND + + N I+I SY N
Sbjct: 168 IDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLT-----NGNGCINILSYPELKPVQSINA 222
Query: 528 NLQYPRCLDFSPGGGFMAVGNAAGKVFLYKLN 559
+ C+ F P G + A G+A V L+ ++
Sbjct: 223 HPSNCICIKFDPMGKYFATGSADALVSLWDVD 254
Score = 46 (21.3 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 380 SKTKELIGTLKMNGTVRSLAFADDGKQLLSSGGD 413
SKT+E L + V S+A++ DG++L S D
Sbjct: 46 SKTREF---LAHSAKVHSVAWSCDGRRLASGSFD 76
>MGI|MGI:2686209 [details] [associations]
symbol:Wdr65 "WD repeat domain 65" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2686209 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 EMBL:AL669952 EMBL:BX842610
EMBL:BX321881 EMBL:BC062805 EMBL:AK003848 IPI:IPI00468360
RefSeq:NP_081065.2 UniGene:Mm.256495 ProteinModelPortal:Q9D180
SMR:Q9D180 PaxDb:Q9D180 PRIDE:Q9D180 Ensembl:ENSMUST00000071972
Ensembl:ENSMUST00000081921 GeneID:68625 KEGG:mmu:68625
UCSC:uc012dkc.1 CTD:149465 GeneTree:ENSGT00620000088018
HOGENOM:HOG000231280 HOVERGEN:HBG080209 InParanoid:A2ACY9
OMA:TERNETQ OrthoDB:EOG4BRWJX NextBio:327576 Bgee:Q9D180
Genevestigator:Q9D180 Uniprot:Q9D180
Length = 1249
Score = 133 (51.9 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 54/189 (28%), Positives = 84/189 (44%)
Query: 276 LLLVAGLDRRLRFFQIDGKRNT-KIQSIFLEDCPVRKASFLPDGSQAIIAGRRKFFYSLD 334
L+ LDR +R + + NT ++ + E+ S P G I+ G F L
Sbjct: 402 LIATCSLDRSVRIWNYES--NTLELYKEYQEEAYT--VSLHPSGHY-IVVG---FADKLR 453
Query: 335 LVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLKMN-G 393
L+ D I P + + S + A V N I + ++ + E I LK + G
Sbjct: 454 LMNLLIDDIRPFKEYSVRGCKECSFSNGGHLFAAV-NGNVIHIFTTTSLENINILKGHTG 512
Query: 394 TVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCINGTALCTSPDG-TFFAA 452
+RSL + D +L+S+G DG VY W+L T V + C + ++ TSPD FA
Sbjct: 513 KIRSLVWNLDDSKLVSAGTDGAVYEWNLSTGKRETECVLKSC-SYNSVTTSPDAKVIFAV 571
Query: 453 GSDSGIVNV 461
GSD + +
Sbjct: 572 GSDQTLKEI 580
>UNIPROTKB|H3BN58 [details] [associations]
symbol:MLST8 "Target of rapamycin complex subunit LST8"
species:9606 "Homo sapiens" [GO:0030838 "positive regulation of
actin filament polymerization" evidence=IEA] [GO:0032314
"regulation of Rac GTPase activity" evidence=IEA] [GO:0050731
"positive regulation of peptidyl-tyrosine phosphorylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050731 GO:GO:0030838
GO:GO:0032314 EMBL:AC009065 HGNC:HGNC:24825 Ensembl:ENST00000569457
Bgee:H3BN58 Uniprot:H3BN58
Length = 202
Score = 118 (46.6 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 33/148 (22%), Positives = 67/148 (45%)
Query: 318 GSQAIIAGRRKFFYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYIL- 376
GS +I + +++ +A + V ++ + EV+PD S+IA G + +
Sbjct: 9 GSDPVILATAGYDHTVRFWQAHSGICTRTVQHQDSQVNALEVTPDRSMIAAAGYQHIRMY 68
Query: 377 -LVSSKTKELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGC 435
L S+ +I +N + S+ F +DG+ + + G D WDLR+R + + +
Sbjct: 69 DLNSNNPNPIISYDGVNKNIASVGFHEDGRWMYTGGEDCTARIWDLRSRNLQCQRIFQVN 128
Query: 436 INGTALCTSPDGTFFAAGSDSGIVNVYN 463
+C P+ G SG +++++
Sbjct: 129 APINCVCLHPNQAELIVGDQSGAIHIWD 156
Score = 37 (18.1 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 539 PGGGFMAVGNAAGKVFLYKL 558
P +MA N+ G +++ L
Sbjct: 180 PDASYMAAVNSTGNCYVWNL 199
>UNIPROTKB|Q5ZMV7 [details] [associations]
symbol:WDR82 "WD repeat-containing protein 82" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 KO:K14962
HOGENOM:HOG000176477 GeneTree:ENSGT00530000063965 EMBL:AJ719277
IPI:IPI00598962 RefSeq:NP_001006135.1 UniGene:Gga.17656
ProteinModelPortal:Q5ZMV7 STRING:Q5ZMV7 PRIDE:Q5ZMV7
Ensembl:ENSGALT00000036280 GeneID:415942 KEGG:gga:415942 CTD:80335
HOVERGEN:HBG089149 NextBio:20819468 ArrayExpress:Q5ZMV7
Uniprot:Q5ZMV7
Length = 313
Score = 124 (48.7 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 43/163 (26%), Positives = 77/163 (47%)
Query: 397 SLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCIN--GTALCT-SPDGTFFAAG 453
S++ DD +S D + WDLR+ C +G ++ G +C+ P+G FAAG
Sbjct: 114 SMSPVDD--TFISGSLDKTIRLWDLRSPNC------QGLMHLQGKPVCSFDPEGLIFAAG 165
Query: 454 SDSGIVNVYNRQEFLGGKRKPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHI 513
+S +V +Y+ + F G K + T + +KF+ND +++ I ST ++LI
Sbjct: 166 VNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILI-ST-NGGFIRLIDA 223
Query: 514 PSYNVFSNWPPANRNLQYPRCLDFSPGGGFMAVGNAAGKVFLY 556
V + N + F+P F+ +G+ GK+ ++
Sbjct: 224 FKGAVLHTFGGYNNSKAVTLEASFTPDSQFIMIGSEDGKIHVW 266
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 130 (50.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 66/246 (26%), Positives = 105/246 (42%)
Query: 313 SFLPDGSQ-AIIAGRRKFFYSLDLVKAKADKIGPLVGREEKSLEFF--EV--SPDSSVIA 367
+F DG A R Y +D K K+ V EK + + V SPD + +A
Sbjct: 288 NFSNDGKYLATGCNRSAQIYDVDTGK----KVHAFVDESEKDGDLYIRSVCFSPDGNYLA 343
Query: 368 FVGNEGYILLVSSKTKELIGTLKMNGT-VRSLAFADDGKQLLSSGGDGQVYHWDLRTRTC 426
+ + + TK++ T + + SL ++ DG+ ++S GD + WD+ C
Sbjct: 344 TGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKC 403
Query: 427 IHRAVDE--GCING-TALCTSPDGTFFAAGSDSGIVNVYNRQEFLGGKRKPIKTIENLTT 483
+E G NG T++ SPDG AAGS IV +++ Q G ++ E
Sbjct: 404 AFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQT---GYF--LERYEGHLD 458
Query: 484 KVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSNWPPA-NRNLQYPRCLDFSPGGG 542
V + F+ D + LA S K SLKL + S N + + + FSP G
Sbjct: 459 SVYSVAFSPDGKSLASGSLDK--SLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGS 516
Query: 543 FMAVGN 548
++ G+
Sbjct: 517 WLISGS 522
Score = 42 (19.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 16/84 (19%), Positives = 36/84 (42%)
Query: 96 TGSAVYFVDPSANSMLSVNEEDAQFSGESDDEEEAWQKK--------PVWVDEEEEQTNV 147
T A +D + ++N E + + + DD E +Q + D E Q +
Sbjct: 5 TARASELLDNLKGEIDALNHELSLYKHQKDDYERKFQNQLAELNTIQQTLYDLERGQNKM 64
Query: 148 NIAKVNRLRKLRKEEDESLISGAE 171
I +R+L+++ ++ I+ ++
Sbjct: 65 KIHYEEEIRQLKRQLEQQNINASQ 88
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 130 (50.8 bits), Expect = 0.00012, P = 0.00012
Identities = 56/221 (25%), Positives = 94/221 (42%)
Query: 205 SSDEETQAVVACGYEDTEAVDDILRTDEDLVVKSSAKLSPGLLEYSRLIDANADESSTGP 264
S + T + CG+ T VD + E+++V + A S G+++ L ++ + TG
Sbjct: 44 SIGKTTSPMSLCGH--TSPVDSVAFNSEEVLVLAGA--SSGVIKLWDLEESKMVRAFTGH 99
Query: 265 ---INSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQA 321
++V+FH + L D LR + D ++ IQ+ + F PDG
Sbjct: 100 RSNCSAVEFHPFGEFLASGSSDTNLRVW--DTRKKGCIQTYKGHTRGISTIEFSPDGRWV 157
Query: 322 IIAGRRKFFYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSK 381
+ G DL A K+ E + + P ++A + + +
Sbjct: 158 VSGGLDNVVKVWDLT---AGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLE 214
Query: 382 TKELIGTLKMNGT-VRSLAFADDGKQLLSSGGDG-QVYHWD 420
T ELIGT + T VR++AF DG+ L DG +VY W+
Sbjct: 215 TFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDGLKVYSWE 255
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 48/202 (23%), Positives = 80/202 (39%)
Query: 265 INSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIA 324
I ++ + +++LL+ A D +L + D K+ +I L V ++ P G+
Sbjct: 14 IYAMHWGTDSRLLVSASQDGKLIIW--DSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACG 71
Query: 325 GRRKF--FYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKT 382
G YSL + L G L D+ +I G+ L
Sbjct: 72 GLDNICSIYSLKTREGNVRVSRELPGHTGY-LSCCRFLDDNQIITSSGDTTCALWDIETG 130
Query: 383 KELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVD-EGCINGTAL 441
++ +G +G V SL+ A DG+ +S D + WD+R C + E IN A
Sbjct: 131 QQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAF 190
Query: 442 CTSPDGTFFAAGSDSGIVNVYN 463
P+G F GSD +++
Sbjct: 191 F--PNGYAFTTGSDDATCRLFD 210
>DICTYBASE|DDB_G0276031 [details] [associations]
symbol:DDB_G0276031 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276031
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAFI02000014 EMBL:X16524 PIR:S05357 RefSeq:XP_643326.1
ProteinModelPortal:P14197 STRING:P14197 EnsemblProtists:DDB0185151
GeneID:8620373 GenomeReviews:CM000151_GR KEGG:ddi:DDB_G0276031
KO:K12880 OMA:YAPEINE ProtClustDB:CLSZ2430924 Uniprot:P14197
Length = 478
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 68/263 (25%), Positives = 112/263 (42%)
Query: 263 GPINSVQFH-RNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQA 321
G I + + +N LL AG D+ ++ + + + S E+ VR + PDG Q
Sbjct: 229 GSIEKISWSPKNNDLLASAGTDKVIKIWDVKIGKCIGTVSTNSENIDVR---WSPDG-QF 284
Query: 322 IIAGRRKFFYSL-DLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIA-FVGN-EGYILLV 378
I+A R +L DL K KI G EE + ++ + D ++A +GN E Y L
Sbjct: 285 IVACTRDDHLALIDLPTIKTLKIYKFNG-EELNQVGWDNNGDLILMANSMGNIEAYKFLP 343
Query: 379 SSKT--KELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCI 436
S T K L ++ + F GK L + D V WD+ C+ + +
Sbjct: 344 KSTTHVKHLKTLYGHTASIYCMEFDPTGKYLAAGSADSIVSLWDIEDMMCVKTFI-KSTF 402
Query: 437 NGTALCTSPDGTFFAAGSDSGIVNVYNRQEFLGGKRKPIKTIENLTTKVDFMKFNNDAQI 496
++ S DG F AA S + +++ + +PI TIE + V + ++ +
Sbjct: 403 PCRSVSFSFDGQFIAASSFESTIEIFHIES-----SQPIHTIE--CSGVSSLMWHPTLPL 455
Query: 497 LAICSTMKKNSLKLIHIPSYNVF 519
LA + +N+ PS VF
Sbjct: 456 LAYAPEINENNKD----PSIRVF 474
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 48/202 (23%), Positives = 80/202 (39%)
Query: 265 INSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIA 324
I ++ + +++LL+ A D +L + D K+ +I L V ++ P G+
Sbjct: 58 IYAMHWGTDSRLLVSASQDGKLIIW--DSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACG 115
Query: 325 GRRKF--FYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKT 382
G YSL + L G L D+ +I G+ L
Sbjct: 116 GLDNICSIYSLKTREGNVRVSRELPGHTGY-LSCCRFLDDNQIITSSGDTTCALWDIETG 174
Query: 383 KELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVD-EGCINGTAL 441
++ +G +G V SL+ A DG+ +S D + WD+R C + E IN A
Sbjct: 175 QQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAF 234
Query: 442 CTSPDGTFFAAGSDSGIVNVYN 463
P+G F GSD +++
Sbjct: 235 F--PNGYAFTTGSDDATCRLFD 254
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 48/202 (23%), Positives = 80/202 (39%)
Query: 265 INSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIA 324
I ++ + +++LL+ A D +L + D K+ +I L V ++ P G+
Sbjct: 58 IYAMHWGTDSRLLVSASQDGKLIIW--DSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACG 115
Query: 325 GRRKF--FYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKT 382
G YSL + L G L D+ +I G+ L
Sbjct: 116 GLDNICSIYSLKTREGNVRVSRELPGHTGY-LSCCRFLDDNQIITSSGDTTCALWDIETG 174
Query: 383 KELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVD-EGCINGTAL 441
++ +G +G V SL+ A DG+ +S D + WD+R C + E IN A
Sbjct: 175 QQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAF 234
Query: 442 CTSPDGTFFAAGSDSGIVNVYN 463
P+G F GSD +++
Sbjct: 235 F--PNGYAFTTGSDDATCRLFD 254
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 48/202 (23%), Positives = 80/202 (39%)
Query: 265 INSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIA 324
I ++ + +++LL+ A D +L + D K+ +I L V ++ P G+
Sbjct: 58 IYAMHWGTDSRLLVSASQDGKLIIW--DSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACG 115
Query: 325 GRRKF--FYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKT 382
G YSL + L G L D+ +I G+ L
Sbjct: 116 GLDNICSIYSLKTREGNVRVSRELPGHTGY-LSCCRFLDDNQIITSSGDTTCALWDIETG 174
Query: 383 KELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVD-EGCINGTAL 441
++ +G +G V SL+ A DG+ +S D + WD+R C + E IN A
Sbjct: 175 QQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAF 234
Query: 442 CTSPDGTFFAAGSDSGIVNVYN 463
P+G F GSD +++
Sbjct: 235 F--PNGYAFTTGSDDATCRLFD 254
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 48/202 (23%), Positives = 80/202 (39%)
Query: 265 INSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIA 324
I ++ + +++LL+ A D +L + D K+ +I L V ++ P G+
Sbjct: 58 IYAMHWGTDSRLLVSASQDGKLIIW--DSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACG 115
Query: 325 GRRKF--FYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKT 382
G YSL + L G L D+ +I G+ L
Sbjct: 116 GLDNICSIYSLKTREGNVRVSRELPGHTGY-LSCCRFLDDNQIITSSGDTTCALWDIETG 174
Query: 383 KELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVD-EGCINGTAL 441
++ +G +G V SL+ A DG+ +S D + WD+R C + E IN A
Sbjct: 175 QQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAF 234
Query: 442 CTSPDGTFFAAGSDSGIVNVYN 463
P+G F GSD +++
Sbjct: 235 F--PNGYAFTTGSDDATCRLFD 254
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 48/202 (23%), Positives = 80/202 (39%)
Query: 265 INSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIA 324
I ++ + +++LL+ A D +L + D K+ +I L V ++ P G+
Sbjct: 58 IYAMHWGTDSRLLVSASQDGKLIIW--DSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACG 115
Query: 325 GRRKF--FYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKT 382
G YSL + L G L D+ +I G+ L
Sbjct: 116 GLDNICSIYSLKTREGNVRVSRELPGHTGY-LSCCRFLDDNQIITSSGDTTCALWDIETG 174
Query: 383 KELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVD-EGCINGTAL 441
++ +G +G V SL+ A DG+ +S D + WD+R C + E IN A
Sbjct: 175 QQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAF 234
Query: 442 CTSPDGTFFAAGSDSGIVNVYN 463
P+G F GSD +++
Sbjct: 235 F--PNGYAFTTGSDDATCRLFD 254
>RGD|1359599 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 RGD:1359599
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:BC081901 IPI:IPI00371120 RefSeq:NP_001007617.1 UniGene:Rn.4063
Ensembl:ENSRNOT00000001499 GeneID:288692 KEGG:rno:288692
UCSC:RGD:1359599 InParanoid:Q66HE3 NextBio:628569
Genevestigator:Q66HE3 Uniprot:Q66HE3
Length = 404
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 52/201 (25%), Positives = 96/201 (47%)
Query: 276 LLLVAGL-DRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAII-AGRRKFFYSL 333
L+L GL D +++ +++ + + ++ VR SF P+GS ++ A R K
Sbjct: 124 LILATGLNDGQIKIWEV--QTGLLLLNLSGHQDVVRDLSFTPNGSLILVSASRDKTLRIW 181
Query: 334 DLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLKMN- 392
DL K +I L G + + +SPD S++ E + L S ++ LI L+ +
Sbjct: 182 DLNK-HGKQIQVLSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQ 239
Query: 393 GTVRSLAFADDGKQLLSSGGDGQVYHWD------LRT--RTCIHRAVDEGCINGTAL--- 441
+V S F+ D L+++ D V WD LR+ T + VD+ ++ ++L
Sbjct: 240 SSVVSCDFSPDSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEAPVDDSDVHMSSLRSV 299
Query: 442 CTSPDGTFFAAGSDSGIVNVY 462
C SP+G + A +D ++ ++
Sbjct: 300 CFSPEGLYLATVADDRLLRIW 320
>UNIPROTKB|C9JXA5 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 HOGENOM:HOG000176356 HGNC:HGNC:4398
IPI:IPI00790302 ProteinModelPortal:C9JXA5 SMR:C9JXA5 STRING:C9JXA5
PRIDE:C9JXA5 Ensembl:ENST00000451587 ArrayExpress:C9JXA5
Bgee:C9JXA5 Uniprot:C9JXA5
Length = 251
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 48/194 (24%), Positives = 77/194 (39%)
Query: 265 INSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIA 324
I ++ + +++LL+ A D +L + D K+ +I L V ++ P G+
Sbjct: 58 IYAMHWGTDSRLLVSASQDGKLIIW--DSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACG 115
Query: 325 GRRKF--FYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKT 382
G YSL + L G L D+ +I G+ L
Sbjct: 116 GLDNICSIYSLKTREGNVRVSRELPGHTGY-LSCCRFLDDNQIITSSGDTTCALWDIETG 174
Query: 383 KELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVD-EGCINGTAL 441
++ +G +G V SL+ A DG+ +S D + WD+R C + E IN A
Sbjct: 175 QQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAF 234
Query: 442 CTSPDGTFFAAGSD 455
P+G F GSD
Sbjct: 235 F--PNGYAFTTGSD 246
>UNIPROTKB|B4N984 [details] [associations]
symbol:GK12179 "WD repeat-containing protein 55 homolog"
species:7260 "Drosophila willistoni" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:CH964232 OMA:EDSMAQE
OrthoDB:EOG4C2FS9 RefSeq:XP_002070645.1 ProteinModelPortal:B4N984
EnsemblMetazoa:FBtr0242830 GeneID:6647877 KEGG:dwi:Dwil_GK12179
FlyBase:FBgn0214190 InParanoid:B4N984 Uniprot:B4N984
Length = 504
Score = 116 (45.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 47/209 (22%), Positives = 91/209 (43%)
Query: 361 PDSSVIAFVGNEGYILLV--SSKTKELIGTLKMNGTV-RSLAFADDGKQLLSSGGDGQVY 417
P+ +IA G + L S++ +L+ T++++ R + F +DG+ L++ D V
Sbjct: 170 PERHIIALATIIGDVHLYEYSNEENKLLKTIEVHAKACRDVEFTEDGRSLITCSKDKSVM 229
Query: 418 HWDLRTRTC--IHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQEFLGGKRKPI 475
D+ T ++ + IN + D FA+G DSG V +++ + +
Sbjct: 230 ITDMETEKLKKLYETAHDDAINKLLVL---DERLFASGDDSGTVKLWDFRT--KDSIFEL 284
Query: 476 KTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSNWPPANRNLQYPRCL 535
K IE+ T++ ND + L + +T L +I + ++ P L C+
Sbjct: 285 KEIEDQVTQM----ITNDQKKLLL-ATSADGYLTTFNIGARKLYVQSEPYEEELN---CM 336
Query: 536 DFSPGGGFMAVGNAAGKVFLYKLNH--YH 562
G + VG + G+++ Y + YH
Sbjct: 337 GIYRGNSKLVVGTSKGRLYSYNWGYFGYH 365
Score = 53 (23.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 18/71 (25%), Positives = 28/71 (39%)
Query: 161 EEDESLISGAEYVSRLRAQHVKLNPGTEWAQLDSRSRDNDPYDESSDEETQAVVACGYED 220
E DE+ + GA R + D + D D DE+ DE +A++A +
Sbjct: 92 EPDEAAVGGASKAKRRKDDDGPSGSSNRNQDSDGNAFDMDEDDET-DETVRAIIAAIKKP 150
Query: 221 TEAVDDILRTD 231
A +I D
Sbjct: 151 RSAPPEIKLED 161
>UNIPROTKB|Q9W7F2 [details] [associations]
symbol:wdr1-a "WD repeat-containing protein 1-A"
species:8355 "Xenopus laevis" [GO:0003779 "actin binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005884 "actin filament"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030043 "actin filament fragmentation" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0003779
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011045 SUPFAM:SSF50974
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005884 GO:GO:0030043
EMBL:AF124140 EMBL:BC041232 EMBL:BC077202 RefSeq:NP_001081923.1
UniGene:Xl.524 ProteinModelPortal:Q9W7F2 GeneID:398123
KEGG:xla:398123 CTD:398123 Xenbase:XB-GENE-6251934
HOVERGEN:HBG000780 Uniprot:Q9W7F2
Length = 607
Score = 110 (43.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 34/138 (24%), Positives = 62/138 (44%)
Query: 360 SPDSSVIAFVGNEGYILLVSSKTKELI----GTLKMNGTVRSLAFADDGKQLLSSGGDGQ 415
SPD S +A G +G I L KT E + G+ +G + +++++ DG QLLS+ GD
Sbjct: 198 SPDGSKLASAGADGQIFLYDGKTGEKVCSLGGSKAHDGGIYAVSWSPDGTQLLSASGDKT 257
Query: 416 VYHWDLRTRTCIHRA-VDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQEFLGGKRKP 474
WD+ + + + ++ C + + S SG +N ++ +P
Sbjct: 258 TKIWDVAANSAVTTFNLGSDVLDQQLGCLWQKD-YLLSVSLSGYINYLDKNN----PARP 312
Query: 475 IKTIENLTTKVDFMKFNN 492
++ I+ + M NN
Sbjct: 313 LRVIKGHNKSIQCMTVNN 330
Score = 61 (26.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 528 NLQY-PRCLDFSPGGGFMAVGNAAGKVFLYKL 558
+L Y P + G G +AVG A GKV LY +
Sbjct: 443 SLDYEPEAVAIHKGSGTVAVGGADGKVHLYSI 474
>UNIPROTKB|F1NUQ0 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000346 "transcription export complex" evidence=IEA]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006406 GO:GO:0000346
GeneTree:ENSGT00700000104559 InterPro:IPR011659 Pfam:PF07676
OMA:LAYACDD EMBL:AADN02028708 IPI:IPI00595007
Ensembl:ENSGALT00000040847 Uniprot:F1NUQ0
Length = 381
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 40/152 (26%), Positives = 64/152 (42%)
Query: 408 LSSGGDGQVYHWDLRTRTCIHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQEF 467
+++ GD + WD+RT CI +G +C SPDG A G+ +V F
Sbjct: 88 VTASGDKTIRIWDVRTTKCIATVNTKG--ENINICWSPDGQTIAVGNKDDVVT------F 139
Query: 468 LGGKRKPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSNWPPANR 527
+ K K E +V+ + +NND + + N I+I SY N
Sbjct: 140 IDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLT-----NGNGCINILSYPELKPIQSINA 194
Query: 528 NLQYPRCLDFSPGGGFMAVGNAAGKVFLYKLN 559
+ C+ F P G + A G+A V L+ ++
Sbjct: 195 HPSNCICIKFDPMGKYFATGSADALVSLWDVD 226
>DICTYBASE|DDB_G0292592 [details] [associations]
symbol:lst8 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0043520 "regulation of
myosin II filament assembly" evidence=IMP] [GO:0043327 "chemotaxis
to cAMP" evidence=IMP] [GO:0032148 "activation of protein kinase B
activity" evidence=IMP] [GO:0031932 "TORC2 complex" evidence=IDA]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP] [GO:0030838 "positive regulation of actin filament
polymerization" evidence=IMP] [GO:0007190 "activation of adenylate
cyclase activity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0292592 GO:GO:0005737
GenomeReviews:CM000155_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000194 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007190 GO:GO:0032148
GO:GO:0030838 GO:GO:0031152 GO:GO:0031932 HSSP:P16649 KO:K08266
GO:GO:0043327 GO:GO:0043520 OMA:NNKGNCY RefSeq:XP_629512.1
ProteinModelPortal:Q54D08 STRING:Q54D08 PRIDE:Q54D08
EnsemblProtists:DDB0233210 GeneID:8628763 KEGG:ddi:DDB_G0292592
ProtClustDB:CLSZ2429378 Uniprot:Q54D08
Length = 304
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 36/152 (23%), Positives = 69/152 (45%)
Query: 368 FVGNE-GYILLVSSKTKELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTC 426
+ G+E G + + K + + V ++ + +L+S +G + WDL + TC
Sbjct: 92 YTGSEDGTVKIWDLKAPGCQRDYECSAPVNTVVLHPNQAELISGDQNGSIRVWDLISNTC 151
Query: 427 IHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQEFLGGKRKPIKTIENLTTKVD 486
V +G + T+L S DG A + G V+ E + +P++ IE +
Sbjct: 152 SRELVPDGEVGITSLTISSDGGLVVASNTKGKCFVWRLGEDDTSRFEPLQKIEAHNAPIL 211
Query: 487 FMKFNNDAQILAICSTMKKNSLKLIHIPSYNV 518
F+ D ++LA CS +++K+ + +NV
Sbjct: 212 KTLFSPDTKLLATCSA--DHTVKIWNTKKFNV 241
>UNIPROTKB|J9PAK6 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0006364 GO:GO:0032040 GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000048785 Uniprot:J9PAK6
Length = 346
Score = 121 (47.7 bits), Expect = 0.00023, P = 0.00023
Identities = 33/113 (29%), Positives = 56/113 (49%)
Query: 350 EEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLK-MNGTVRSLAFADDGKQLL 408
+++ + FE+SPD V+A +G I L + + + T + + +V + F G QLL
Sbjct: 62 DQEDITAFELSPDDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVVFVSRGTQLL 121
Query: 409 SSGGDGQVYHWDLRTRTCIHRAVD--EGCINGTALCTSPDGTFFAAGSDSGIV 459
SSG DG V W ++ C+ + +D E + G C+ D SDS ++
Sbjct: 122 SSGSDGLVKLWTIKNNECV-KTLDAHEDKVWGLH-CSRLDDRALTGASDSCVI 172
>FB|FBgn0025457 [details] [associations]
symbol:Bub3 "Bub3" species:7227 "Drosophila melanogaster"
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0007093 "mitotic cell cycle checkpoint"
evidence=NAS] [GO:0007094 "mitotic spindle assembly checkpoint"
evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005875 GO:GO:0005654 GO:GO:0000776
GO:GO:0007052 GO:GO:0007094 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AF075594 EMBL:AF088846
IntAct:O76523 STRING:O76523 FlyBase:FBgn0025457 InParanoid:O76523
OrthoDB:EOG4M9072 Uniprot:O76523
Length = 327
Score = 95 (38.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 37/166 (22%), Positives = 78/166 (46%)
Query: 265 INSVQFH-RNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAII 323
I++V+F ++ Q + + D LRF+ + + ++ F++D P+ +F+ ++
Sbjct: 16 ISAVKFGPKSNQYMAASSWDGTLRFYDVPANQ---LRQKFVQDAPLLDCAFMD--IVHVV 70
Query: 324 AGRRKFFYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTK 383
+G L V +A+ I +G E+ + E + + I + + L + K
Sbjct: 71 SGSLDNQLRLFDVNTQAESI---IGAHEEPIRCVEHAEYVNGILTGSWDNTVKLWDMREK 127
Query: 384 ELIGTLKMN-GTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIH 428
+GT + N G V S++ D+ +++ + D +V WDLR +H
Sbjct: 128 RCVGTFEQNNGKVYSMSVIDE--KIVVATSDRKVLIWDLRKDGQLH 171
Score = 69 (29.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 19/75 (25%), Positives = 34/75 (45%)
Query: 450 FAAGSDSGIVNVYNRQEFLGGKRKPIKTIENLTTKVDFMKFNNDAQILAI-CSTMKKNSL 508
FA G GIVN+++ G +K + T + + F++D LAI CS + +
Sbjct: 250 FATGGSDGIVNIWD-----GFNKKRLCQFHEYDTSISTLNFSSDGSALAIGCSYLDQLPE 304
Query: 509 KLIHIPSYNVFSNWP 523
+P ++ +P
Sbjct: 305 TPATVPHPAIYIRYP 319
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 120 (47.3 bits), Expect = 0.00026, P = 0.00026
Identities = 63/300 (21%), Positives = 116/300 (38%)
Query: 265 INSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIA 324
I SV F N + L +D L+ + + K + + V F P G + +
Sbjct: 23 ITSVDFSLNKKQLASGSMDSCLKIWSM--KPQMRAYCLVGHKDAVMCVQFSPSG-HLVAS 79
Query: 325 GRRKFFYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKE 384
G R L + K + + ++ S D + ++ I + + ++
Sbjct: 80 GSRDKTVCLWVPSVKGEST--VFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQK 137
Query: 385 LIGTLKMN-GTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCINGTALCT 443
+ +L + VR F+ DG+ + S+ D V WD +R CIH + G +
Sbjct: 138 FLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGF-ANHVEF 196
Query: 444 SPDGTFFAAGSDSGIVNVYNRQEFLGGKRKPIKTIENLTTKVDFMKFNNDAQILAICSTM 503
P GT AA V V++ + + ++ + T V+ + F+ L S
Sbjct: 197 HPSGTCIAAAGTDKTVKVWDVR-----MNRLLQHYQVHTAAVNSLSFHPSGNYLITASN- 250
Query: 504 KKNSLKLIHIPS----YNVFSNWPPANRNLQYPRCLDFSPGGGFMAVGNAAGKVFLYKLN 559
++LK++ + Y + + PA C+ FS G F A G + +V ++K N
Sbjct: 251 -DSTLKILDLLEGRLLYTLHGHQGPAT-------CVAFSRTGDFFASGGSDEQVMVWKTN 302
>UNIPROTKB|Q29RH4 [details] [associations]
symbol:THOC3 "THO complex subunit 3" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 KO:K12880 GO:GO:0003723 GO:GO:0051028 EMBL:BC114172
IPI:IPI00732803 RefSeq:NP_001039765.1 UniGene:Bt.3953
ProteinModelPortal:Q29RH4 GeneID:529231 KEGG:bta:529231 CTD:84321
HOVERGEN:HBG059732 NextBio:20874992 InterPro:IPR011659 Pfam:PF07676
Uniprot:Q29RH4
Length = 351
Score = 122 (48.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 40/152 (26%), Positives = 64/152 (42%)
Query: 408 LSSGGDGQVYHWDLRTRTCIHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQEF 467
+++ GD + WD+RT CI +G +C SPDG A G+ +V F
Sbjct: 116 VTASGDKTIRIWDVRTTKCIATVNTKG--ENINICWSPDGQTIAVGNKDDVVT------F 167
Query: 468 LGGKRKPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSNWPPANR 527
+ K K E +V+ + +NND + + N I+I SY N
Sbjct: 168 IDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLT-----NGNGCINILSYPELKPVQSINA 222
Query: 528 NLQYPRCLDFSPGGGFMAVGNAAGKVFLYKLN 559
+ C+ F P G + A G+A V L+ ++
Sbjct: 223 HPSNCICIKFDPMGKYFATGSADALVSLWDVD 254
Score = 40 (19.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 380 SKTKELIGTLKMNGTVRSLAFADDGKQLLSSGGD 413
SKT+E + V S+A++ DG++L S D
Sbjct: 46 SKTREFPAH---SAKVHSVAWSCDGRRLASGSFD 76
>UNIPROTKB|E2RC43 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046784 "intronless viral mRNA export from
host nucleus" evidence=IEA] [GO:0000346 "transcription export
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 KO:K12880 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 CTD:84321 InterPro:IPR011659
Pfam:PF07676 OMA:LAYACDD EMBL:AAEX03002980 RefSeq:XP_537899.2
ProteinModelPortal:E2RC43 Ensembl:ENSCAFT00000022750 GeneID:480781
KEGG:cfa:480781 NextBio:20855728 Uniprot:E2RC43
Length = 351
Score = 122 (48.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 40/152 (26%), Positives = 64/152 (42%)
Query: 408 LSSGGDGQVYHWDLRTRTCIHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQEF 467
+++ GD + WD+RT CI +G +C SPDG A G+ +V F
Sbjct: 116 VTASGDKTIRIWDVRTTKCIATVNTKG--ENINICWSPDGQTIAVGNKDDVVT------F 167
Query: 468 LGGKRKPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSNWPPANR 527
+ K K E +V+ + +NND + + N I+I SY N
Sbjct: 168 IDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLT-----NGNGCINILSYPELKPVQSINA 222
Query: 528 NLQYPRCLDFSPGGGFMAVGNAAGKVFLYKLN 559
+ C+ F P G + A G+A V L+ ++
Sbjct: 223 HPSNCICIKFDPMGKYFATGSADALVSLWDVD 254
Score = 40 (19.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 380 SKTKELIGTLKMNGTVRSLAFADDGKQLLSSGGD 413
SKT+E + V S+A++ DG++L S D
Sbjct: 46 SKTREFPAH---SAKVHSVAWSCDGRRLASGSFD 76
>UNIPROTKB|F1S386 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 KO:K12880 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 InterPro:IPR011659 Pfam:PF07676
OMA:LAYACDD EMBL:CU993810 RefSeq:XP_003123712.1
Ensembl:ENSSSCT00000015360 GeneID:100524425 KEGG:ssc:100524425
Uniprot:F1S386
Length = 351
Score = 122 (48.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 40/152 (26%), Positives = 64/152 (42%)
Query: 408 LSSGGDGQVYHWDLRTRTCIHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQEF 467
+++ GD + WD+RT CI +G +C SPDG A G+ +V F
Sbjct: 116 VTASGDKTIRIWDVRTTKCIATVNTKG--ENINICWSPDGQTIAVGNKDDVVT------F 167
Query: 468 LGGKRKPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSNWPPANR 527
+ K K E +V+ + +NND + + N I+I SY N
Sbjct: 168 IDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLT-----NGNGCINILSYPELKPVQSINA 222
Query: 528 NLQYPRCLDFSPGGGFMAVGNAAGKVFLYKLN 559
+ C+ F P G + A G+A V L+ ++
Sbjct: 223 HPSNCICIKFDPMGKYFATGSADALVSLWDVD 254
Score = 40 (19.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 380 SKTKELIGTLKMNGTVRSLAFADDGKQLLSSGGD 413
SKT+E + V S+A++ DG++L S D
Sbjct: 46 SKTREFPAH---SAKVHSVAWSCDGRRLASGSFD 76
>MGI|MGI:1920916 [details] [associations]
symbol:Thoc3 "THO complex 3" species:10090 "Mus musculus"
[GO:0000346 "transcription export complex" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=ISO]
[GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1920916 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 KO:K12880
GO:GO:0003723 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:AK010668 EMBL:BC019603 IPI:IPI00311904
RefSeq:NP_082873.2 UniGene:Mm.292487 ProteinModelPortal:Q8VE80
SMR:Q8VE80 PhosphoSite:Q8VE80 PaxDb:Q8VE80 PRIDE:Q8VE80
Ensembl:ENSMUST00000026990 GeneID:73666 KEGG:mmu:73666
UCSC:uc007qod.2 InParanoid:Q8VE80 NextBio:338741 Bgee:Q8VE80
CleanEx:MM_THOC3 Genevestigator:Q8VE80
GermOnline:ENSMUSG00000025872 Uniprot:Q8VE80
Length = 351
Score = 122 (48.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 40/152 (26%), Positives = 64/152 (42%)
Query: 408 LSSGGDGQVYHWDLRTRTCIHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQEF 467
+++ GD + WD+RT CI +G +C SPDG A G+ +V F
Sbjct: 116 VTASGDKTIRIWDVRTTKCIATVNTKG--ENINICWSPDGQTIAVGNKDDVVT------F 167
Query: 468 LGGKRKPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSNWPPANR 527
+ K K E +V+ + +NND + + N I+I SY N
Sbjct: 168 IDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLT-----NGNGCINILSYPELKPVQSINA 222
Query: 528 NLQYPRCLDFSPGGGFMAVGNAAGKVFLYKLN 559
+ C+ F P G + A G+A V L+ ++
Sbjct: 223 HPSNCICIKFDPMGKYFATGSADALVSLWDVD 254
Score = 40 (19.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 380 SKTKELIGTLKMNGTVRSLAFADDGKQLLSSGGD 413
SKT+E + V S+A++ DG++L S D
Sbjct: 46 SKTREFPAH---SAKVHSVAWSCDGRRLASGSFD 76
>RGD|1311669 [details] [associations]
symbol:Thoc3 "THO complex 3" species:10116 "Rattus norvegicus"
[GO:0000346 "transcription export complex" evidence=IEA;ISO]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311669 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 EMBL:CH474032
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:BC168852 IPI:IPI00364620
RefSeq:NP_001099529.1 UniGene:Rn.101956 STRING:B5DEY5
Ensembl:ENSRNOT00000000116 GeneID:290519 KEGG:rno:290519
UCSC:RGD:1311669 NextBio:631152 Genevestigator:B5DEY5
Uniprot:B5DEY5
Length = 351
Score = 122 (48.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 40/152 (26%), Positives = 64/152 (42%)
Query: 408 LSSGGDGQVYHWDLRTRTCIHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQEF 467
+++ GD + WD+RT CI +G +C SPDG A G+ +V F
Sbjct: 116 VTASGDKTIRIWDVRTTKCIATVNTKG--ENINICWSPDGQTIAVGNKDDVVT------F 167
Query: 468 LGGKRKPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSNWPPANR 527
+ K K E +V+ + +NND + + N I+I SY N
Sbjct: 168 IDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLT-----NGNGCINILSYPELKPVQSINA 222
Query: 528 NLQYPRCLDFSPGGGFMAVGNAAGKVFLYKLN 559
+ C+ F P G + A G+A V L+ ++
Sbjct: 223 HPSNCICIKFDPMGKYFATGSADALVSLWDVD 254
Score = 40 (19.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 380 SKTKELIGTLKMNGTVRSLAFADDGKQLLSSGGD 413
SKT+E + V S+A++ DG++L S D
Sbjct: 46 SKTREFPAH---SAKVHSVAWSCDGRRLASGSFD 76
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 120 (47.3 bits), Expect = 0.00030, P = 0.00030
Identities = 48/217 (22%), Positives = 83/217 (38%)
Query: 263 GPINSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAI 322
G + +FH N L +G DR + + + G ++ V + + DGS
Sbjct: 57 GEVYCCKFHPNGATLASSGYDRLILMWNVYGDCEN-YATLKGHSGAVMELHYNTDGSLLF 115
Query: 323 IAGRRKFFYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKT 382
A K D +++ L G F + ++G + L +
Sbjct: 116 SASTDKTVCVWD--SETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRK 173
Query: 383 KELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCINGTALC 442
K + T + V S+ F D Q++S G D + WDLR I+ G + T L
Sbjct: 174 KASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGD-SVTGLS 232
Query: 443 TSPDGTFFAAGSDSGIVNVYNRQEFLGGKRKPIKTIE 479
S DG++ + S V V++ + F K + +K +
Sbjct: 233 LSADGSYLLSNSMDNSVRVWDIRPF-APKERCVKIFQ 268
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 122 (48.0 bits), Expect = 0.00031, P = 0.00031
Identities = 51/212 (24%), Positives = 87/212 (41%)
Query: 259 ESSTGPINSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDG 318
++ T P+ SV F + Q L+ A D+ ++ + + R + S++ VR A F PDG
Sbjct: 99 KAHTAPVRSVDFSADGQFLVTASEDKSIKVWSM--YRQRFLYSLYRHTHWVRCAKFSPDG 156
Query: 319 SQAIIAGRRKFFYSLDLV-KAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILL 377
+ K D K + VG F + SP+ + IA G++ + +
Sbjct: 157 RLIVSCSEDKTIKIWDTTSKQCVNNFSDSVG----FANFVDFSPNGTCIASAGSDHAVRI 212
Query: 378 VSSKTKELIGTLKMNGT-VRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCI 436
+ L+ +++ V L+F G L+++ DG V DL I+ +G
Sbjct: 213 WDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTL--QGHT 270
Query: 437 NGT-ALCTSPDGTFFAAGSDSGIVNVYNRQEF 467
+ S DG F +G V V+ R F
Sbjct: 271 GPVFTVSFSKDGELFTSGGADAQVLVW-RTSF 301
>FB|FBgn0037569 [details] [associations]
symbol:tex "tex" species:7227 "Drosophila melanogaster"
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR011659
Pfam:PF07676 EMBL:AY118857 ProteinModelPortal:Q8MSF3 SMR:Q8MSF3
STRING:Q8MSF3 PaxDb:Q8MSF3 PRIDE:Q8MSF3 FlyBase:FBgn0037569
InParanoid:Q8MSF3 OrthoDB:EOG4FJ6RC ArrayExpress:Q8MSF3 Bgee:Q8MSF3
Uniprot:Q8MSF3
Length = 320
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 37/154 (24%), Positives = 65/154 (42%)
Query: 406 QLLSSGGDGQVYHWDLRTRTCIHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQ 465
Q ++ GD V WD+R C+ +G + SPDG A G+ ++
Sbjct: 87 QFATASGDKTVRIWDIRVGKCVSVTNTKG--ENINIAWSPDGKTIAVGNKEDLIT----- 139
Query: 466 EFLGGKRKPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSNWPPA 525
F+ + I+ E + +V+ + +NN + + N L +HI SY +
Sbjct: 140 -FIDTRTNKIRVEEPFSFEVNEISWNNTNDLFFLT-----NGLGCMHILSYPSLEHQMTL 193
Query: 526 NRNLQYPRCLDFSPGGGFMAVGNAAGKVFLYKLN 559
+ C++F P G + A G+A +V L+ N
Sbjct: 194 KAHPANCICIEFGPTGKYFATGSADAQVSLWDAN 227
>UNIPROTKB|Q294Y7 [details] [associations]
symbol:GA13204 "WD repeat-containing protein 55 homolog"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:CM000070 OrthoDB:EOG4C2FS9
RefSeq:XP_001359675.2 ProteinModelPortal:Q294Y7 GeneID:4802839
KEGG:dpo:Dpse_GA13204 FlyBase:FBgn0073241 InParanoid:Q294Y7
Uniprot:Q294Y7
Length = 503
Score = 124 (48.7 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 47/209 (22%), Positives = 91/209 (43%)
Query: 361 PDSSVIAFVGNEGYILLVS--SKTKELIGTLKMNGTV-RSLAFADDGKQLLSSGGDGQVY 417
PD +IA G + L ++ +L+ T++++ R + F +DG+ LL++ D V
Sbjct: 169 PDRDIIALATIIGDVHLYEYGNEGNKLLRTIEVHSKACRDVEFTEDGRYLLTASKDKCVM 228
Query: 418 HWDLRTRTC--IHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQEFLGGKRKPI 475
DL T ++ + IN + D FA G D+G V +++ + + PI
Sbjct: 229 VTDLETEKLKKLYETAHDDAINKLHVL---DENLFATGDDAGTVKLWDLRT-----KNPI 280
Query: 476 KTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSNWPPANRNLQYPRCL 535
++ + ++ M N+ ++L +T L +I + ++ P L C+
Sbjct: 281 FELKEVEDQITQMITNDQKKLLL--ATSADGYLTTFNIAARKLYVQSEPYEEELN---CM 335
Query: 536 DFSPGGGFMAVGNAAGKVFLYKLNH--YH 562
G + VG + GK++ Y + YH
Sbjct: 336 GIYRGSSKLVVGTSKGKLYSYNWGYFGYH 364
Score = 42 (19.8 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 12/55 (21%), Positives = 28/55 (50%)
Query: 220 DTEAVDDILRTDEDLVVKSSAKLSPGLLEYSRLIDANADESSTGPINSVQFHRNA 274
D + +DD+ D+D+V+ +++ L D++ DE + + + ++NA
Sbjct: 12 DADELDDL---DDDMVIGVIEEIAQEALVGEDESDSDIDEHDLADMEAPEPNQNA 63
>UNIPROTKB|E1BRZ6 [details] [associations]
symbol:TWF2 "Twinfilin-2" species:9031 "Gallus gallus"
[GO:0003779 "actin binding" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IEA] [GO:0048188 "Set1C/COMPASS complex" evidence=IEA]
[GO:0072357 "PTW/PP1 phosphatase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR002108
InterPro:IPR015943 Pfam:PF00241 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS51263 SMART:SM00102 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000785 GO:GO:0042800 GO:GO:0048188
GO:GO:0072357 GeneTree:ENSGT00530000063965 EMBL:AADN02056441
EMBL:AADN02056442 EMBL:AADN02056443 EMBL:AADN02056444
EMBL:AADN02056445 EMBL:AADN02056446 EMBL:AADN02056447
IPI:IPI00577651 ProteinModelPortal:E1BRZ6
Ensembl:ENSGALT00000006337 ArrayExpress:E1BRZ6 Uniprot:E1BRZ6
Length = 601
Score = 123 (48.4 bits), Expect = 0.00034, P = 0.00034
Identities = 44/166 (26%), Positives = 80/166 (48%)
Query: 397 SLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCIN--GTALCT-SPDGTFFAAG 453
S++ DD +S D + WDLR+ C +G ++ G +C+ P+G FAAG
Sbjct: 114 SMSPVDD--TFISGSLDKTIRLWDLRSPNC------QGLMHLQGKPVCSFDPEGLIFAAG 165
Query: 454 SDSGIVNVYNRQEFLGGKRKPIKTIE---NLTTKVDFMKFNNDAQILAICSTMKKNSLKL 510
+S +V +Y+ + F K+ P T + + T + +KF+ND +++ I ST ++L
Sbjct: 166 VNSEMVKLYDLRSF--DKKGPFATFKMQYDRTCEWTGLKFSNDGKLILI-ST-NGGFIRL 221
Query: 511 IHIPSYNVFSNWPPANRNLQYPRCLDFSPGGGFMAVGNAAGKVFLY 556
I V + N + F+P F+ +G+ GK+ ++
Sbjct: 222 IDAFKGAVLHTFGGYNNSKAVTLEASFTPDSQFIMIGSEDGKIHVW 267
>CGD|CAL0001281 [details] [associations]
symbol:orf19.1095 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031081
"nuclear pore distribution" evidence=IEA] [GO:0016973 "poly(A)+
mRNA export from nucleus" evidence=IEA] [GO:0010389 "regulation of
G2/M transition of mitotic cell cycle" evidence=IEA] [GO:2000728
"regulation of mRNA export from nucleus in response to heat stress"
evidence=IEA] [GO:0000973 "posttranscriptional tethering of RNA
polymerase II gene DNA at nuclear periphery" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0001281 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000168
EMBL:AACQ01000169 KO:K14298 RefSeq:XP_712083.1 RefSeq:XP_712107.1
ProteinModelPortal:Q59QW3 STRING:Q59QW3 GeneID:3646293
GeneID:3646319 KEGG:cal:CaO19.1095 KEGG:cal:CaO19.8697
Uniprot:Q59QW3
Length = 383
Score = 120 (47.3 bits), Expect = 0.00036, P = 0.00036
Identities = 52/225 (23%), Positives = 93/225 (41%)
Query: 238 SSAKLSPGLLEYSRLIDANADESSTGPINSVQFHRNAQLLLVAGLDRRLRFFQID-GKRN 296
S+ S + L D + I + F LL VA D+++R ++ID N
Sbjct: 12 STTATSSAVTGQELLNDITINNPPEDSIEDISFSPQQDLLAVASWDKKVRIYEIDPNSGN 71
Query: 297 TKIQSIFLEDCPVRKASFLPDGSQAIIAGRRKFFYSLDLVKAKADKIGPLVGREEKSLEF 356
++++ + PV + + DG++ I G DL +A +IG KS+ +
Sbjct: 72 NMGRAMYEHEAPVFSSRWSIDGTKIISGGADNQVKIFDLATQQAQQIGQH-DSAVKSVRY 130
Query: 357 FEVSP-DSSVIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGKQLLSSG-GDG 414
E P ++ VIA + + ++ + + T+ + V S+ D+ ++LL G D
Sbjct: 131 VECGPTNTQVIASGSWDKTLKYWDMRSPQPVSTINLPERVYSM---DNSQKLLVVGCADR 187
Query: 415 QVYHWDLRTRTCIHRAVDEGCINGTALCTS--PDGTFFAAGSDSG 457
+ DL I ++ + + C S P FA GS G
Sbjct: 188 HISIIDLNNPQQIFKS-SQSPLKWQTRCVSCYPQANGFAVGSIEG 231
>UNIPROTKB|Q59QW3 [details] [associations]
symbol:GLE2 "Likely WD40 repeat nuclear pore protein Gle2p"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001281 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000168 EMBL:AACQ01000169 KO:K14298 RefSeq:XP_712083.1
RefSeq:XP_712107.1 ProteinModelPortal:Q59QW3 STRING:Q59QW3
GeneID:3646293 GeneID:3646319 KEGG:cal:CaO19.1095
KEGG:cal:CaO19.8697 Uniprot:Q59QW3
Length = 383
Score = 120 (47.3 bits), Expect = 0.00036, P = 0.00036
Identities = 52/225 (23%), Positives = 93/225 (41%)
Query: 238 SSAKLSPGLLEYSRLIDANADESSTGPINSVQFHRNAQLLLVAGLDRRLRFFQID-GKRN 296
S+ S + L D + I + F LL VA D+++R ++ID N
Sbjct: 12 STTATSSAVTGQELLNDITINNPPEDSIEDISFSPQQDLLAVASWDKKVRIYEIDPNSGN 71
Query: 297 TKIQSIFLEDCPVRKASFLPDGSQAIIAGRRKFFYSLDLVKAKADKIGPLVGREEKSLEF 356
++++ + PV + + DG++ I G DL +A +IG KS+ +
Sbjct: 72 NMGRAMYEHEAPVFSSRWSIDGTKIISGGADNQVKIFDLATQQAQQIGQH-DSAVKSVRY 130
Query: 357 FEVSP-DSSVIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGKQLLSSG-GDG 414
E P ++ VIA + + ++ + + T+ + V S+ D+ ++LL G D
Sbjct: 131 VECGPTNTQVIASGSWDKTLKYWDMRSPQPVSTINLPERVYSM---DNSQKLLVVGCADR 187
Query: 415 QVYHWDLRTRTCIHRAVDEGCINGTALCTS--PDGTFFAAGSDSG 457
+ DL I ++ + + C S P FA GS G
Sbjct: 188 HISIIDLNNPQQIFKS-SQSPLKWQTRCVSCYPQANGFAVGSIEG 231
>WB|WBGene00000773 [details] [associations]
symbol:cpf-1 species:6239 "Caenorhabditis elegans"
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0040010 "positive regulation
of growth rate" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0040027 HOGENOM:HOG000234077 KO:K14406
GeneTree:ENSGT00700000104487 GO:GO:0001703 EMBL:Z68315 PIR:T21482
RefSeq:NP_495822.1 ProteinModelPortal:Q19864 SMR:Q19864
STRING:Q19864 PaxDb:Q19864 EnsemblMetazoa:F28C6.3 GeneID:174378
KEGG:cel:CELE_F28C6.3 UCSC:F28C6.3 CTD:174378 WormBase:F28C6.3
InParanoid:Q19864 OMA:TKFITTH NextBio:883778 Uniprot:Q19864
Length = 430
Score = 120 (47.3 bits), Expect = 0.00044, P = 0.00044
Identities = 39/168 (23%), Positives = 72/168 (42%)
Query: 265 INSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIA 324
+N+V FH +L+ D+ ++ F K E PVR S P G ++A
Sbjct: 173 VNTVIFHPRDSILISGSNDKTVKLFDFSKTAVKKAMKTLSEVYPVRALSCHPGGEFLLVA 232
Query: 325 GRRKF--FYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKT 382
Y+++ +A A P + +S+ S ++ + +G++ + +
Sbjct: 233 TDHPTVRLYNIETAQAYASA-NP-DDQHTESVTDVHYSENARLYVTASKDGHVKIWDGVS 290
Query: 383 KELIGTLKM--NGT-VRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCI 427
+ T K +G+ + S F +GK +L+SG D V W+L T C+
Sbjct: 291 NRCVETFKRAHDGSSICSAKFTKNGKYILTSGMDSIVKLWELSTNRCL 338
>UNIPROTKB|Q9KV05 [details] [associations]
symbol:VC_0353 "Putative uncharacterized protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AE003852 GenomeReviews:AE003852_GR
OMA:LIKFLGH PIR:A82335 RefSeq:NP_230007.1 ProteinModelPortal:Q9KV05
DNASU:2615066 GeneID:2615066 KEGG:vch:VC0353 PATRIC:20079779
ProtClustDB:CLSK873945 Uniprot:Q9KV05
Length = 327
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 50/224 (22%), Positives = 92/224 (41%)
Query: 246 LLEYSRLIDANADESSTGPINSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLE 305
LL+ +L D A + P++ ++ +++ V + + + + SI
Sbjct: 64 LLQDKKLADLGAQDPQANPVSVIRI-ADSERFAVTASQNNFAVWDLAWTQGKGLWSI--T 120
Query: 306 DCPVRKASFLPDGSQAIIA-GRRKFFYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSS 364
D +R DG Q ++ K Y +DLV + + L RE+ + +S +
Sbjct: 121 DGLIRDVDLSSDGEQVLLGLTNGKAIY-VDLVSGRRMEF--LAHREK--VNSVALSANGR 175
Query: 365 VIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWDLR-- 422
GN+ + L +KT +++ + V + +GK +S G Q WDL
Sbjct: 176 YALTGGNDYHAYLWDTKTGQIVRQFEHEQRVNRVTLQREGKLAFTSDGGNQALIWDLTAD 235
Query: 423 TRTCIHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQE 466
++ ++ I TA S DG G+ SG+V V+N Q+
Sbjct: 236 SKPIQLQSFRRQLIFSTARF-SDDGKKLITGTPSGLVEVWNTQD 278
>TIGR_CMR|VC_0353 [details] [associations]
symbol:VC_0353 "lipoprotein, putative" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE003852
GenomeReviews:AE003852_GR OMA:LIKFLGH PIR:A82335 RefSeq:NP_230007.1
ProteinModelPortal:Q9KV05 DNASU:2615066 GeneID:2615066
KEGG:vch:VC0353 PATRIC:20079779 ProtClustDB:CLSK873945
Uniprot:Q9KV05
Length = 327
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 50/224 (22%), Positives = 92/224 (41%)
Query: 246 LLEYSRLIDANADESSTGPINSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLE 305
LL+ +L D A + P++ ++ +++ V + + + + SI
Sbjct: 64 LLQDKKLADLGAQDPQANPVSVIRI-ADSERFAVTASQNNFAVWDLAWTQGKGLWSI--T 120
Query: 306 DCPVRKASFLPDGSQAIIA-GRRKFFYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSS 364
D +R DG Q ++ K Y +DLV + + L RE+ + +S +
Sbjct: 121 DGLIRDVDLSSDGEQVLLGLTNGKAIY-VDLVSGRRMEF--LAHREK--VNSVALSANGR 175
Query: 365 VIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWDLR-- 422
GN+ + L +KT +++ + V + +GK +S G Q WDL
Sbjct: 176 YALTGGNDYHAYLWDTKTGQIVRQFEHEQRVNRVTLQREGKLAFTSDGGNQALIWDLTAD 235
Query: 423 TRTCIHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQE 466
++ ++ I TA S DG G+ SG+V V+N Q+
Sbjct: 236 SKPIQLQSFRRQLIFSTARF-SDDGKKLITGTPSGLVEVWNTQD 278
>UNIPROTKB|P74598 [details] [associations]
symbol:sll1491 "Uncharacterized WD repeat-containing
protein sll1491" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S76794 RefSeq:NP_442894.1
RefSeq:YP_005652955.1 ProteinModelPortal:P74598 IntAct:P74598
GeneID:12255406 GeneID:952007 KEGG:syn:sll1491 KEGG:syy:SYNGTS_3002
PATRIC:23843592 OMA:KMPEQTI ProtClustDB:CLSK2301952 Uniprot:P74598
Length = 348
Score = 118 (46.6 bits), Expect = 0.00051, P = 0.00051
Identities = 52/175 (29%), Positives = 79/175 (45%)
Query: 252 LIDANADESSTGPINSVQFHRN-AQLLLVA-GLDRRLRFFQIDGKRNTKIQSIFLEDCPV 309
LI AD + GP SV F + +Q + A G DR ++F+ D + + + +
Sbjct: 179 LIQTLAD--NLGPTTSVVFTPDGSQFITGAIGQDRTIKFW--DANTFELLGTSPQQPGFI 234
Query: 310 RKASFLPDGSQAIIAGRRKFFYSLDLVKAKADKIGPLVGREEKSLEF--FEVSPDSSVIA 367
+ PDG + ++ R F + +L AK L SLE VSP++ +A
Sbjct: 235 NGLAVTPDGRK-LVGAVRNFVKAWNLADAKE-----LFSVRGPSLEINTIAVSPNNRWVA 288
Query: 368 FVGNEGYILLVSSKTKELIGTLKMN-GTVRSLAFADDGKQLLSSGGDGQVYHWDL 421
EG I++ + + TL+ + G V SLAF+ DG L S D V WDL
Sbjct: 289 TANKEGTIMIFDLANGKQVTTLRGHQGWVLSLAFSPDGNTLYSGAEDKTVKIWDL 343
>MGI|MGI:2144041 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:2144041
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 EMBL:CH466529 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:AF033188 EMBL:AF072881 EMBL:AK157999 EMBL:BC055100
IPI:IPI00556687 RefSeq:NP_067514.2 UniGene:Mm.28489
ProteinModelPortal:O54929 SMR:O54929 STRING:O54929
PhosphoSite:O54929 PRIDE:O54929 Ensembl:ENSMUST00000031309
GeneID:59043 KEGG:mmu:59043 NextBio:314658 Bgee:O54929
CleanEx:MM_WSB2 Genevestigator:O54929 GermOnline:ENSMUSG00000029364
Uniprot:O54929
Length = 404
Score = 119 (46.9 bits), Expect = 0.00051, P = 0.00051
Identities = 51/201 (25%), Positives = 95/201 (47%)
Query: 276 LLLVAGL-DRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAII-AGRRKFFYSL 333
L+L GL D +++ +++ + + ++ VR SF P GS ++ A R K
Sbjct: 124 LILATGLNDGQIKIWEV--QTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIW 181
Query: 334 DLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLKMN- 392
DL K +I L G + + +SPD S++ E + L S ++ LI L+ +
Sbjct: 182 DLNK-HGKQIQVLSGHLQW-VYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQ 239
Query: 393 GTVRSLAFADDGKQLLSSGGDGQVYHWD------LRT--RTCIHRAVDEGCINGTAL--- 441
+V S F+ D L+++ D V WD LR+ T + +D+ ++ ++L
Sbjct: 240 SSVVSCDFSPDSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEPTMDDSDVHMSSLRSV 299
Query: 442 CTSPDGTFFAAGSDSGIVNVY 462
C SP+G + A +D ++ ++
Sbjct: 300 CFSPEGLYLATVADDRLLRIW 320
>ZFIN|ZDB-GENE-030131-333 [details] [associations]
symbol:wdr82 "WD repeat domain containing 82"
species:7955 "Danio rerio" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR002108 InterPro:IPR015943 Pfam:PF00241 Pfam:PF00400
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51263 SMART:SM00102
SMART:SM00320 ZFIN:ZDB-GENE-030131-333 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005622
OrthoDB:EOG4TTGJJ EMBL:AY423022 IPI:IPI00492504
ProteinModelPortal:Q6TEM7 SMR:Q6TEM7 PRIDE:Q6TEM7
HOGENOM:HOG000170291 InParanoid:Q6TEM7 ArrayExpress:Q6TEM7
Bgee:Q6TEM7 Uniprot:Q6TEM7
Length = 600
Score = 121 (47.7 bits), Expect = 0.00056, P = 0.00056
Identities = 41/168 (24%), Positives = 79/168 (47%)
Query: 392 NGTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCIN--GTALCT-SPDGT 448
N V +L+ + +S D + WDLR+ C +G ++ G +C+ P+G
Sbjct: 107 NKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNC------QGLMHLQGKPVCSFDPEGL 160
Query: 449 FFAAGSDSGIVNVYNRQEFLGGKRKPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSL 508
FAAG +S +V +Y+ + F G K T + +KF+ND +++ + ST +L
Sbjct: 161 IFAAGVNSEMVKLYDLRSFDKGPFATFKLQYERTCEWTGLKFSNDGKLILV-ST-NGGTL 218
Query: 509 KLIHIPSYNVFSNWPPANRNLQYPRCLDFSPGGGFMAVGNAAGKVFLY 556
+++ V ++ N + F+P F+ +G+ GK+ ++
Sbjct: 219 RVLDAFKGAVLHSFGGYNNSKGVILEASFTPDSQFIMIGSEDGKIHVW 266
>TAIR|locus:2173542 [details] [associations]
symbol:AT5G60940 "AT5G60940" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 HSSP:P16649 HOGENOM:HOG000234077
KO:K14406 EMBL:AY084766 EMBL:AF515696 EMBL:AY136384 EMBL:BT000184
IPI:IPI00526744 RefSeq:NP_200902.1 UniGene:At.29134
ProteinModelPortal:Q8L4J2 SMR:Q8L4J2 IntAct:Q8L4J2 STRING:Q8L4J2
PaxDb:Q8L4J2 PRIDE:Q8L4J2 EnsemblPlants:AT5G60940.1 GeneID:836215
KEGG:ath:AT5G60940 TAIR:At5g60940 InParanoid:Q8L4J2 OMA:PWANCIV
PhylomeDB:Q8L4J2 ProtClustDB:CLSN2686712 ArrayExpress:Q8L4J2
Genevestigator:Q8L4J2 Uniprot:Q8L4J2
Length = 429
Score = 119 (46.9 bits), Expect = 0.00056, P = 0.00056
Identities = 42/164 (25%), Positives = 67/164 (40%)
Query: 264 PINSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAII 323
PIN + FH + +L+ + D ++FF + +F + VR SF P G + ++
Sbjct: 178 PINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSG-EFLL 236
Query: 324 AGRRK---FFYSLDLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILL--- 377
AG Y ++ + P G ++ S S+ +G I L
Sbjct: 237 AGTDHPIPHLYDVNTYQCFLPSNFPDSG-VSGAINQVRYSSTGSIYITASKDGAIRLFDG 295
Query: 378 VSSKTKELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWDL 421
VS+K IG V S F D + +LSSG D V W++
Sbjct: 296 VSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEI 339
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 120 (47.3 bits), Expect = 0.00062, P = 0.00062
Identities = 52/212 (24%), Positives = 91/212 (42%)
Query: 352 KSLEFFEVSPDSSVIAFVGNEGYILLVSSKT-KELIGTLKMNGTVRSLAFADDGKQLLSS 410
K L + + D S+I ++ ++ KT EL +G V +F+ D LLSS
Sbjct: 262 KKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 321
Query: 411 GGDGQVYHWDLRTRTCIHRAVDEGCINGTALCT--SPDGTFFAAGSDSGIVNVYNRQEFL 468
DG V W L+T TC+ V N T SP G +F +G + ++ +
Sbjct: 322 SEDGTVRLWSLQTFTCL---VGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHY- 377
Query: 469 GGKRKPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSNWPPANRN 528
+P++ V+ +F+ ++ +A S + +++L + + N +
Sbjct: 378 ----QPLRIFAGHLADVNCTRFHPNSNYVATGSADR--TVRLWDVLNGNCVRIFTGHKGP 431
Query: 529 LQYPRCLDFSPGGGFMAVGNAAGKVFLYKLNH 560
+ L FSP G F+A G G+V L+ + H
Sbjct: 432 IH---SLTFSPNGRFLATGATDGRVLLWDIGH 460
>UNIPROTKB|E2RGF2 [details] [associations]
symbol:WDR82 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0072357 "PTW/PP1 phosphatase complex"
evidence=IEA] [GO:0048188 "Set1C/COMPASS complex" evidence=IEA]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000785 "chromatin" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000785 GO:GO:0042800 GO:GO:0048188 KO:K14962
GO:GO:0072357 GeneTree:ENSGT00530000063965 CTD:80335 OMA:CTNMAFW
EMBL:AAEX03012197 RefSeq:XP_859624.1 ProteinModelPortal:E2RGF2
SMR:E2RGF2 Ensembl:ENSCAFT00000015643 GeneID:484740 KEGG:cfa:484740
NextBio:20858819 Uniprot:E2RGF2
Length = 313
Score = 116 (45.9 bits), Expect = 0.00068, P = 0.00068
Identities = 42/163 (25%), Positives = 77/163 (47%)
Query: 397 SLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCIN--GTALCT-SPDGTFFAAG 453
S++ DD +S D + WDLR+ C +G ++ G +C+ P+G FAAG
Sbjct: 114 SMSPVDD--TFISGSLDKTIRLWDLRSPNC------QGLMHLQGKPVCSFDPEGLIFAAG 165
Query: 454 SDSGIVNVYNRQEFLGGKRKPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHI 513
+S +V +Y+ + F G K + T + +KF+ND +++ I ST + ++LI
Sbjct: 166 VNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILI-ST-NGSFIRLIDA 223
Query: 514 PSYNVFSNWPPANRNLQYPRCLDFSPGGGFMAVGNAAGKVFLY 556
V + + F+P F+ +G+ GK+ ++
Sbjct: 224 FKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVW 266
>UNIPROTKB|Q6UXN9 [details] [associations]
symbol:WDR82 "WD repeat-containing protein 82" species:9606
"Homo sapiens" [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0072357 "PTW/PP1 phosphatase complex"
evidence=IDA] [GO:0035097 "histone methyltransferase complex"
evidence=IDA] [GO:0051568 "histone H3-K4 methylation" evidence=IDA]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471055 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000785 GO:GO:0048188 GO:GO:0051568 KO:K14962
GO:GO:0072357 HOGENOM:HOG000176477 OrthoDB:EOG4TTGJJ CTD:80335
HOVERGEN:HBG089149 EMBL:AY358264 EMBL:AK074290 EMBL:AK291380
IPI:IPI00152695 RefSeq:NP_079498.2 UniGene:Hs.194110
ProteinModelPortal:Q6UXN9 SMR:Q6UXN9 IntAct:Q6UXN9 STRING:Q6UXN9
PhosphoSite:Q6UXN9 DMDM:74758580 PaxDb:Q6UXN9 PeptideAtlas:Q6UXN9
PRIDE:Q6UXN9 Ensembl:ENST00000296490 GeneID:80335 KEGG:hsa:80335
UCSC:uc003ddk.2 GeneCards:GC03M052265 HGNC:HGNC:28826 MIM:611059
neXtProt:NX_Q6UXN9 PharmGKB:PA142670585 InParanoid:Q6UXN9
OMA:CTNMAFW ChiTaRS:WDR82 GenomeRNAi:80335 NextBio:70900
ArrayExpress:Q6UXN9 Bgee:Q6UXN9 CleanEx:HS_WDR82
Genevestigator:Q6UXN9 Uniprot:Q6UXN9
Length = 313
Score = 116 (45.9 bits), Expect = 0.00068, P = 0.00068
Identities = 42/163 (25%), Positives = 77/163 (47%)
Query: 397 SLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCIN--GTALCT-SPDGTFFAAG 453
S++ DD +S D + WDLR+ C +G ++ G +C+ P+G FAAG
Sbjct: 114 SMSPVDD--TFISGSLDKTIRLWDLRSPNC------QGLMHLQGKPVCSFDPEGLIFAAG 165
Query: 454 SDSGIVNVYNRQEFLGGKRKPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHI 513
+S +V +Y+ + F G K + T + +KF+ND +++ I ST + ++LI
Sbjct: 166 VNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILI-ST-NGSFIRLIDA 223
Query: 514 PSYNVFSNWPPANRNLQYPRCLDFSPGGGFMAVGNAAGKVFLY 556
V + + F+P F+ +G+ GK+ ++
Sbjct: 224 FKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVW 266
>UNIPROTKB|F2Z5U3 [details] [associations]
symbol:WDR82 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072357 "PTW/PP1 phosphatase complex" evidence=IEA]
[GO:0048188 "Set1C/COMPASS complex" evidence=IEA] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000785
GO:GO:0042800 GO:GO:0048188 KO:K14962 GO:GO:0072357
GeneTree:ENSGT00530000063965 OMA:CTNMAFW EMBL:CU915558
RefSeq:XP_003132297.1 UniGene:Ssc.1045 UniGene:Ssc.53788
ProteinModelPortal:F2Z5U3 SMR:F2Z5U3 Ensembl:ENSSSCT00000012513
GeneID:100522703 KEGG:ssc:100522703 CTD:728505 Uniprot:F2Z5U3
Length = 313
Score = 116 (45.9 bits), Expect = 0.00068, P = 0.00068
Identities = 42/163 (25%), Positives = 77/163 (47%)
Query: 397 SLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCIN--GTALCT-SPDGTFFAAG 453
S++ DD +S D + WDLR+ C +G ++ G +C+ P+G FAAG
Sbjct: 114 SMSPVDD--TFISGSLDKTIRLWDLRSPNC------QGLMHLQGKPVCSFDPEGLIFAAG 165
Query: 454 SDSGIVNVYNRQEFLGGKRKPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHI 513
+S +V +Y+ + F G K + T + +KF+ND +++ I ST + ++LI
Sbjct: 166 VNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILI-ST-NGSFIRLIDA 223
Query: 514 PSYNVFSNWPPANRNLQYPRCLDFSPGGGFMAVGNAAGKVFLY 556
V + + F+P F+ +G+ GK+ ++
Sbjct: 224 FKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVW 266
>MGI|MGI:1924555 [details] [associations]
symbol:Wdr82 "WD repeat domain containing 82" species:10090
"Mus musculus" [GO:0000785 "chromatin" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0035097 "histone methyltransferase complex"
evidence=ISO] [GO:0048188 "Set1C/COMPASS complex" evidence=ISO]
[GO:0051568 "histone H3-K4 methylation" evidence=ISO;IMP]
[GO:0072357 "PTW/PP1 phosphatase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924555 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000785 GO:GO:0003682
GO:GO:0042800 GO:GO:0048188 GO:GO:0051568 KO:K14962 GO:GO:0072357
HOGENOM:HOG000176477 GeneTree:ENSGT00530000063965 OrthoDB:EOG4TTGJJ
CTD:80335 HOVERGEN:HBG089149 OMA:CTNMAFW ChiTaRS:WDR82
EMBL:AK035109 EMBL:AK037620 EMBL:AK149692 EMBL:EF011615
EMBL:BC019115 EMBL:BC031502 IPI:IPI00221414 RefSeq:NP_084172.1
UniGene:Mm.265125 ProteinModelPortal:Q8BFQ4 SMR:Q8BFQ4
IntAct:Q8BFQ4 STRING:Q8BFQ4 PhosphoSite:Q8BFQ4
REPRODUCTION-2DPAGE:Q8BFQ4 PaxDb:Q8BFQ4 PRIDE:Q8BFQ4
Ensembl:ENSMUST00000020490 GeneID:77305 KEGG:mmu:77305
InParanoid:Q8BFQ4 NextBio:346735 Bgee:Q8BFQ4 CleanEx:MM_WDR82
Genevestigator:Q8BFQ4 Uniprot:Q8BFQ4
Length = 313
Score = 116 (45.9 bits), Expect = 0.00068, P = 0.00068
Identities = 42/163 (25%), Positives = 77/163 (47%)
Query: 397 SLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCIN--GTALCT-SPDGTFFAAG 453
S++ DD +S D + WDLR+ C +G ++ G +C+ P+G FAAG
Sbjct: 114 SMSPVDD--TFISGSLDKTIRLWDLRSPNC------QGLMHLQGKPVCSFDPEGLIFAAG 165
Query: 454 SDSGIVNVYNRQEFLGGKRKPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHI 513
+S +V +Y+ + F G K + T + +KF+ND +++ I ST + ++LI
Sbjct: 166 VNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILI-ST-NGSFIRLIDA 223
Query: 514 PSYNVFSNWPPANRNLQYPRCLDFSPGGGFMAVGNAAGKVFLY 556
V + + F+P F+ +G+ GK+ ++
Sbjct: 224 FKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVW 266
>ZFIN|ZDB-GENE-040808-14 [details] [associations]
symbol:thoc3 "THO complex 3" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040808-14 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 KO:K12880
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:BX511257 EMBL:BC079495 EMBL:BC152622
IPI:IPI00485776 RefSeq:NP_001003758.1 UniGene:Dr.78573
STRING:Q6AXK9 Ensembl:ENSDART00000079016 GeneID:445302
KEGG:dre:445302 InParanoid:Q6AXK9 NextBio:20832048 Uniprot:Q6AXK9
Length = 322
Score = 117 (46.2 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 35/151 (23%), Positives = 64/151 (42%)
Query: 408 LSSGGDGQVYHWDLRTRTCIHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQEF 467
+++ GD + WD+RT C+ +G +C SPDG A G+ +V F
Sbjct: 87 VTASGDKTIRIWDVRTTKCMATVSTKG--ENINICWSPDGQTIAVGNKDDVVT------F 138
Query: 468 LGGKRKPIKTIENLTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSNWPPANR 527
+ K + E +V+ + +NND + + T + ++ P + + N
Sbjct: 139 IDAKTHRPRAEEQFKFEVNEISWNNDNDMFFL--TNGNGCINILSYPELKLIQS---INA 193
Query: 528 NLQYPRCLDFSPGGGFMAVGNAAGKVFLYKL 558
+ C+ F P G + A G+A V L+ +
Sbjct: 194 HPSNCICIKFDPTGKYFATGSADALVSLWNV 224
Score = 40 (19.1 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 395 VRSLAFADDGKQLLSSGGD 413
V S+A++ DGK+L S D
Sbjct: 29 VHSVAWSCDGKRLASGSFD 47
>DICTYBASE|DDB_G0289501 [details] [associations]
symbol:cdc40 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0289501 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681
GenomeReviews:CM000154_GR GO:GO:0003676 EMBL:AAFI02000141
GO:GO:0000084 GO:GO:0000398 KO:K12816 OMA:KRQKRGK
RefSeq:XP_636182.1 ProteinModelPortal:Q54HF5 STRING:Q54HF5
EnsemblProtists:DDB0233421 GeneID:8627169 KEGG:ddi:DDB_G0289501
InParanoid:Q54HF5 ProtClustDB:CLSZ2429764 Uniprot:Q54HF5
Length = 595
Score = 112 (44.5 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 46/202 (22%), Positives = 82/202 (40%)
Query: 276 LLLVAGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQAIIAG--RRKFFYSL 333
LLL AG+D ++ + G R IQ+ VR F DG + + G R+ +
Sbjct: 319 LLLSAGMDNTVKIWDAYGDRRC-IQTYMGHSQAVRDICFSNDGRRFLSCGYDRQTRLWDT 377
Query: 334 DLVKAKADKIGPLVGREEKSLEFFEVSPDSSVIAFVGNEGYILLVSSKTKELIGTLKMN- 392
+ K + G+ ++F G++ I+ K+ +++ +
Sbjct: 378 ETGKILSSFTN---GKIPYCIKFNPDDDKQEQFLCGGSDKKIIQWDIKSNQIVQEYDQHL 434
Query: 393 GTVRSLAFADDGKQLLSSGGDGQVYHWDLRTRTCIHRAVDEGCINGTALCTSPDGTFFAA 452
G V ++ F DD ++ ++S D + WD I D + A+ P G +FAA
Sbjct: 435 GAVNTITFLDDNRRFVTSSDDKSLRVWDWGIPVVIKYISDPSMHSMPAVALHPKGKWFAA 494
Query: 453 GSDSGIVNVYN-RQEFLGGKRK 473
S + +Y+ R F K+K
Sbjct: 495 QSLDNQILIYSARDRFRMNKKK 516
Score = 53 (23.7 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 535 LDFSPGGGFMAVGNAAGKVFLY 556
L FSP G F+ G++ GK F +
Sbjct: 530 LGFSPDGKFIYSGDSTGKAFFW 551
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.132 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 564 548 0.00096 119 3 11 23 0.45 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 93
No. of states in DFA: 617 (66 KB)
Total size of DFA: 301 KB (2156 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 59.23u 0.12s 59.35t Elapsed: 00:00:03
Total cpu time: 59.25u 0.12s 59.37t Elapsed: 00:00:03
Start: Mon May 20 17:59:57 2013 End: Mon May 20 18:00:00 2013