Citrus Sinensis ID: 043174

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150------
Protein Sequence
MVRLYHDLKCYDYKPYLISSLSFNSHSSASSCSSRNERHLISSYFHHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVYIKKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSAN
Secondary Structure (PSIPRED)
ccEEccccccccccccEEccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccEEEEEEccccEEEEEEEEHHHHHHHHHHHHHccccccccccEEEEcccEEEEEEEEccccHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEccEEcccHHHHHcccccccccccccccccHHcccccccccccccccccHHHHHHHHHHHHcccccccccccEccEcccccccEEEEHHHHHHHHHHHHHHHcccccccEEEEEEccccEEEEEEEccccccHHHHHHccccccccHHHcc
Coil and Loop (DISEMBL)
mvrlyhdlkcydykpylisslsfnshssasscssrnerHLISSyfhhtphktnqpAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVYIKKRNRVHIEKEILKmldhpflpslfaEFEASHYSRLVIeycpggdlltvsQRQRRLRFSIPSAN
Flexible Loop (DISEMBL)
MVRLYHDLKCYDYKPYLISSLSFNSHSSASSCSSRNERHLISSYFHHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGsgiirsvyikkrnrVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLtvsqrqrrlrfsipsan
Low Complexity Region (SEG)
MVRLYHDLKCYDYKPYLIsslsfnshssasscssRNERHLISSYFHHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVYIKKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSAN
Disordered region (IsUnstruct)
**RLYHDLKCYDYKPYLISSLS**********************************************GQVGLDQFQLFRRLGSGIIRSVYIKKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVS**************
Disordered Region (DISOPRED)
**************************************************************************QFQLFRRLGSGIIRSVYIKKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQ***********
Disordered Region (DISEMBL)
MVRLYHDLKCYDYKPYLISSLSF************NERHLISSYFHHT*********RAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVYIKKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSAN
Disordered Region (DISPRO)
MVRLYHDLKCYDYKPYLISSL*******************************NQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVYIKKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQR**********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVRLYHDLKCYDYKPYLISSLSFNSHSSASSCSSRNERHLISSYFHHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVYIKKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSAN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	156	2.2.26 [Sep-21-2011]
Q64FQ2	525	Protein kinase PINOID 2 O	yes	no	0.846	0.251	0.446	4e-27
Q94E49	493	Protein kinase PINOID 2 O	yes	no	0.756	0.239	0.373	6e-22
A2YBX5	589	Protein kinase G11A OS=Or	N/A	no	0.711	0.188	0.398	7e-19
Q0DCT8	589	Protein kinase G11A OS=Or	no	no	0.711	0.188	0.405	9e-19
O64682	438	Protein kinase PINOID OS=	no	no	0.705	0.251	0.382	3e-18
Q9LFA2	934	Serine/threonine-protein	no	no	0.602	0.100	0.401	2e-17
Q2QM77	484	Protein kinase PINOID OS=	no	no	0.846	0.272	0.335	1e-15
P15792	609	Protein kinase PVPK-1 OS=	N/A	no	0.653	0.167	0.373	9e-15
Q05999	578	Serine/threonine-protein	no	no	0.621	0.167	0.354	2e-13
O48963	996	Phototropin-1 OS=Arabidop	no	no	0.666	0.104	0.353	3e-13

>sp|Q64FQ2|PID2_ARATH Protein kinase PINOID 2 OS=Arabidopsis thaliana GN=PID2 PE=1 SV=1

 Score =  120 bits (300), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/159 (44%), Positives = 90/159 (56%), Gaps = 27/159 (16%)

Query: 24  NSHSSASSCSSRN--ERHLISSYFHHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRR 81
           +S +++ SCSS +    H ++SY    PHK NQ A  AM +L +     VGL+ F+L +R
Sbjct: 33  SSFTASPSCSSISHLSNHGLNSYNQSKPHKANQVAWEAMARLRRCCGRAVGLEHFRLLKR 92

Query: 82  LGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSL 116
           LGSG I SVY+                         KK  R  +EK+IL MLDHPF P+L
Sbjct: 93  LGSGDIGSVYLCQIRGSPETAFYAMKVVDKEAVAVKKKLGRAEMEKKILGMLDHPFCPTL 152

Query: 117 FAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
           +A FEASHYS LV+EYCPGGDL  V  RQ   RF+I S 
Sbjct: 153 YAAFEASHYSFLVMEYCPGGDLYAVRLRQPSKRFTISST 191

Serine/threonine-protein kinase involved in the regulation of auxin signaling. Plays a minor role in the regulation of cellular auxin efflux and cotyledon organogenesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q94E49|PID2_ORYSJ Protein kinase PINOID 2 OS=Oryza sativa subsp. japonica GN=PID2 PE=2 SV=1

 Score =  103 bits (256), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 62/166 (37%), Positives = 85/166 (51%), Gaps = 48/166 (28%)

Query: 23  FNSHSSASSCSSRNERHLISSYFHHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRL 82
           F   + ASSC              + PHK NQ    A+ +L +   G+VGL+ F+L RRL
Sbjct: 41  FGGDTPASSC-------------RYKPHKANQAEWEAIRRL-RAGAGRVGLEHFRLVRRL 86

Query: 83  GSGIIRSVYI----------------------------------KKRNRVHIEKEILKML 108
           GSG + +VY+                                  KK  R  +E++IL+ L
Sbjct: 87  GSGDLGNVYLCRLREPWSSSSMTTTAGGCLYAMKVVDKDALAFRKKLRRAEVERDILRTL 146

Query: 109 DHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPS 154
           DHPFLP+L+A+FEASHY+ LV+E+CPGGDL    QRQ   RF++ S
Sbjct: 147 DHPFLPTLYADFEASHYACLVMEFCPGGDLHVARQRQPGRRFTVSS 192

Serine/threonine-protein kinase involved in the regulation of auxin signaling.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A2YBX5|G11A_ORYSI Protein kinase G11A OS=Oryza sativa subsp. indica GN=OsI_021818 PE=2 SV=1

 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 76/143 (53%), Gaps = 32/143 (22%)

Query: 27  SSASSCSSRNERHLISSYFHHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGI 86
           S  S+CSS      ISS     PHK N     A+ ++++   G +GL  F+L ++LG G 
Sbjct: 155 SDESACSS------ISSVTK--PHKANDSRWEAI-QMIRTRDGILGLSHFKLLKKLGCGD 205

Query: 87  IRSVYIKKRN-----------------------RVHIEKEILKMLDHPFLPSLFAEFEAS 123
           I SVY+ + N                       R   EKEIL+ LDHPFLP+L+  FE  
Sbjct: 206 IGSVYLSELNGTKSYFAMKVMDKASLASRKKLLRAQTEKEILQCLDHPFLPTLYTHFETD 265

Query: 124 HYSRLVIEYCPGGDLLTVSQRQR 146
            +S LV+E+CPGGDL T+ QRQR
Sbjct: 266 KFSCLVMEFCPGGDLHTLRQRQR 288

May play a role in the regulation of metabolism and signal transduction processes.

Oryza sativa subsp. indica (taxid: 39946)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q0DCT8|G11A_ORYSJ Protein kinase G11A OS=Oryza sativa subsp. japonica GN=Os06g0291600 PE=2 SV=1

 Score = 92.4 bits (228), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 76/143 (53%), Gaps = 32/143 (22%)

Query: 27  SSASSCSSRNERHLISSYFHHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGI 86
           S  S+CSS      ISS     PHK N     A+ ++++   G +GL  F+L ++LG G 
Sbjct: 155 SDESACSS------ISSVTK--PHKANDSRWEAI-QMIRTRDGILGLSHFKLLKKLGCGD 205

Query: 87  IRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS 123
           I SVY+                       KK  R   EKEIL+ LDHPFLP+L+  FE  
Sbjct: 206 IGSVYLSELSGTKSYFAMKVMDKASLASRKKLLRAQTEKEILQCLDHPFLPTLYTHFETD 265

Query: 124 HYSRLVIEYCPGGDLLTVSQRQR 146
            +S LV+E+CPGGDL T+ QRQR
Sbjct: 266 KFSCLVMEFCPGGDLHTLRQRQR 288

May play a role in the regulation of metabolism and signal transduction processes.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64682|PID_ARATH Protein kinase PINOID OS=Arabidopsis thaliana GN=PID PE=1 SV=1

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 77/141 (54%), Gaps = 31/141 (21%)

Query: 43  SYFHHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVYI---------- 92
           S+    PH+++  A   + +  +Q    +    F+L RR+G+G I +VY+          
Sbjct: 45  SFLSLKPHRSSDFAYAEIRRRKKQ---GLTFRDFRLMRRIGAGDIGTVYLCRLAGDEEES 101

Query: 93  ------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCP 134
                             KK +R  +EK ILKMLDHPFLP+L+AEFEASH+S +V+EYC 
Sbjct: 102 RSSYFAMKVVDKEALALKKKMHRAEMEKTILKMLDHPFLPTLYAEFEASHFSCIVMEYCS 161

Query: 135 GGDLLTVSQRQRRLRFSIPSA 155
           GGDL ++  RQ   RFS+ SA
Sbjct: 162 GGDLHSLRHRQPHRRFSLSSA 182

Serine/threonine-protein kinase involved in the regulation of auxin signaling. Acts as a positive regulator of cellular auxin efflux and regulates organ development by enhancing polar auxin transport. Phosphorylates conserved serine residues in the PIN auxin efflux carriers. Phosphorylation of PIN proteins is required and sufficient for apical-basal PIN polarity that enables directional intercellular auxin fluxes, which mediate differential growth, tissue patterning and organogenesis. Acts in association with PIN1 to control the establishment of bilateral symmetry and promotion of cotyledon outgrowth. Regulates root gravitropism through modulation of PIN2-dependent basipetal auxin transport. Required for polarization of PIN3-dependent auxin transport for hypocotyl gravitropic response. The protein kinase activity of PID is essential for its auxin efflux regulatory function. PID kinase and PP2A phosphatase activities antagonistically regulate phosphorylation of PIN proteins, affecting PIN sorting.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LFA2|KIPK_ARATH Serine/threonine-protein kinase KIPK OS=Arabidopsis thaliana GN=KIPK PE=1 SV=1

 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 66/117 (56%), Gaps = 23/117 (19%)

Query: 62  KLLQQEHGQVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRV 98
           K ++ ++G +GL  F L ++LG G I +VY+                       KK  R 
Sbjct: 524 KHIKVQYGSLGLRHFNLLKKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKSPRA 583

Query: 99  HIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
             E+EILKMLDHPFLP+L+A+F + + S LV+EYCPGGDL  + Q+Q    F  P+A
Sbjct: 584 QAEREILKMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRCFPEPAA 640

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q2QM77|PID_ORYSJ Protein kinase PINOID OS=Oryza sativa subsp. japonica GN=PID PE=2 SV=1

 Score = 82.4 bits (202), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 58/173 (33%), Positives = 82/173 (47%), Gaps = 41/173 (23%)

Query: 18  ISSLSFNSHSSA------SSCSSRNERHLISSYFHHTPHKTNQPAKRAMNKLLQQEHGQV 71
           +S LSF+   SA      +SCS      L+       PH++   A  A+          +
Sbjct: 53  LSRLSFDCSPSAAVAAAATSCSPPRASVLLR------PHRSGDVAWAAIRAASTTSAAPL 106

Query: 72  GLDQFQLFRRLGSGIIRSVYI----------------------------KKRNRVHIEKE 103
           G   F+L RR+G G I +VY+                            +K  R   EK 
Sbjct: 107 GPRDFKLVRRIGGGDIGTVYLCRLRSSPERESPCMYAMKVVDRRAVARKQKLGRAAAEKR 166

Query: 104 ILKMLDHPFLPSLFAEFEAS-HYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
           IL+ LDHPFLP+LFA+F+A+ H+S  V+E+CPGGDL ++  R    RF +PSA
Sbjct: 167 ILRQLDHPFLPTLFADFDATPHFSCAVMEFCPGGDLHSLRHRMPSRRFPLPSA 219

Serine/threonine-protein kinase involved in the regulation of auxin signaling. May control polar auxin transport and probably plays a role in the pattern formation and organogenesis in the rice shoot.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P15792|KPK1_PHAVU Protein kinase PVPK-1 OS=Phaseolus vulgaris PE=2 SV=1

 Score = 79.3 bits (194), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 65/126 (51%), Gaps = 24/126 (19%)

Query: 49  PHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVYI---------------- 92
           PHK N     A+ + ++   G + +  F+L ++LG G I SVY+                
Sbjct: 203 PHKANDIRWEAI-QAVRTRDGMLEMRHFRLLKKLGCGDIGSVYLAELSGTRTSFAMKVMN 261

Query: 93  -------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQ 145
                  KK  R   E+EIL+ LDHPFLP+L+  FE   +S LV+E+CPGGDL  + QRQ
Sbjct: 262 KTELANRKKLLRAQTEREILQSLDHPFLPTLYTHFETEIFSCLVMEFCPGGDLHALRQRQ 321

Query: 146 RRLRFS 151
               FS
Sbjct: 322 PGKYFS 327

Phaseolus vulgaris (taxid: 3885)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q05999|KPK7_ARATH Serine/threonine-protein kinase AtPK7 OS=Arabidopsis thaliana GN=PK7 PE=2 SV=1

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 65/127 (51%), Gaps = 30/127 (23%)

Query: 47  HTPHKTNQPAKRAMNKLLQQEHGQVG----LDQFQLFRRLGSGIIRSVYI---------- 92
           + PH+ N   +      +Q+   +VG       F+L ++LG G I +VY+          
Sbjct: 152 YKPHRDNNDKRWVA---IQEVRSRVGSSLEAKDFKLIKKLGGGDIGNVYLAELIGTGVSF 208

Query: 93  -------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLL 139
                        KK  R   EKEIL+ LDHPFLP+L++ FE    S LV+E+CPGGDL 
Sbjct: 209 AVKVMEKAAIAARKKLVRAQTEKEILQSLDHPFLPTLYSHFETEMNSCLVMEFCPGGDLH 268

Query: 140 TVSQRQR 146
           ++ Q+QR
Sbjct: 269 SLRQKQR 275

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O48963|PHOT1_ARATH Phototropin-1 OS=Arabidopsis thaliana GN=PHOT1 PE=1 SV=1

 Score = 73.9 bits (180), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 26/130 (20%)

Query: 42  SSYFHHTPHKTNQPAKRAMNKLLQQEHGQ-VGLDQFQLFRRLGSGIIRSVYIKK------ 94
           S   H  PH+ + P   A+ K+L  E G+ +GL  F+  + LGSG   SV++ +      
Sbjct: 630 SKVVHCKPHRKDSPPWIAIQKVL--ESGEPIGLKHFKPVKPLGSGDTGSVHLVELVGTDQ 687

Query: 95  --------------RNRVH---IEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGD 137
                         RN+VH    E+EIL +LDHPFLP+L+A F+   +  L+ +Y PGG+
Sbjct: 688 LFAMKAMDKAVMLNRNKVHRARAEREILDLLDHPFLPALYASFQTKTHICLITDYYPGGE 747

Query: 138 LLTVSQRQRR 147
           L  +  RQ R
Sbjct: 748 LFMLLDRQPR 757

Protein kinase that acts as a blue-light photoreceptor in a signal-transduction pathway for photo-induced movements. Required for blue-light mediated mRNA destabilization. Mediates calcium spiking of extracellular origin in response to low rate of blue light. Mediates also rapid membrane depolarization and growth inhibition in response to blue light. Necessary for root phototropism. Involved in hypocotyl phototropism under low rate but not under high rate blue light. Contributes to the chloroplast accumulation but seems to be not required for chloroplast translocation. Regulates stomata opening and photomorphogenesis response of leaf tissue. Confers sensitivity to drought. Not involved in hypocotyl elongation inhibition, anthocyanin accumulation or cotyledon opening.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	156
356511648	481	PREDICTED: protein kinase PINOID 2-like	0.698	0.226	0.492	6e-27
255566941	504	serine/threonine protein kinase, putativ	0.724	0.224	0.492	3e-26
224136105	458	predicted protein [Populus trichocarpa]	0.679	0.231	0.518	3e-26
156481452	487	putative serine/threonine protein kinase	0.679	0.217	0.518	3e-26
356563039	490	PREDICTED: protein kinase PINOID 2-like	0.698	0.222	0.478	9e-26
225445430	470	PREDICTED: protein kinase PINOID 2-like	0.692	0.229	0.496	9e-26
297738919	382	unnamed protein product [Vitis vinifera]	0.692	0.282	0.496	1e-25
2760836	676	putative second messenger-dependent prot	0.839	0.193	0.449	1e-25
110738299	574	putative second messenger-dependent prot	0.846	0.229	0.446	2e-25
42569356	525	protein pinoid2 [Arabidopsis thaliana] g	0.846	0.251	0.446	2e-25

>gi|356511648|ref|XP_003524535.1| PREDICTED: protein kinase PINOID 2-like [Glycine max]

 Score =  125 bits (314), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 68/138 (49%), Positives = 81/138 (58%), Gaps = 29/138 (21%)

Query: 46  HHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVYI------------- 92
           H  PHK NQ A  AM +L + + GQVGLD F+L RRLGSG + +VY+             
Sbjct: 61  HAKPHKANQAAWEAMRRLWR-DKGQVGLDHFRLLRRLGSGDLGNVYLCQIRNPVVGLPQC 119

Query: 93  ---------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGD 137
                          KK  R  +EKEIL MLDHPFLP+L+ EF+ASHYS LV+E+CPGGD
Sbjct: 120 FYAMKVVDREALAIRKKLQRAEMEKEILAMLDHPFLPTLYTEFDASHYSCLVMEFCPGGD 179

Query: 138 LLTVSQRQRRLRFSIPSA 155
           L    QRQ   RFSI SA
Sbjct: 180 LYAARQRQPGKRFSIASA 197

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255566941|ref|XP_002524453.1| serine/threonine protein kinase, putative [Ricinus communis] gi|223536241|gb|EEF37893.1| serine/threonine protein kinase, putative [Ricinus communis]

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/142 (49%), Positives = 83/142 (58%), Gaps = 29/142 (20%)

Query: 42  SSYFHHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVYI--------- 92
           S Y  + PHK NQ A  A+ K LQ  +G+VGLD F+L RRLGSG + +VY+         
Sbjct: 51  SLYSTYKPHKANQAAWEAI-KRLQIANGRVGLDHFRLLRRLGSGDLGNVYLCQIRNPVVG 109

Query: 93  -------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC 133
                               K  R  +EKEIL MLDHPFLP+L+AEFEASHYS LV+E+C
Sbjct: 110 LPQCFYAMKVVDKEALVIRNKLQRAEVEKEILGMLDHPFLPTLYAEFEASHYSCLVMEFC 169

Query: 134 PGGDLLTVSQRQRRLRFSIPSA 155
           PGGDL    QRQ   RFSI SA
Sbjct: 170 PGGDLYAARQRQPGRRFSISSA 191

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224136105|ref|XP_002322241.1| predicted protein [Populus trichocarpa] gi|222869237|gb|EEF06368.1| predicted protein [Populus trichocarpa]

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/135 (51%), Positives = 80/135 (59%), Gaps = 29/135 (21%)

Query: 49  PHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVYI---------------- 92
           PHK NQ A +A+ K LQ+  G+VGLD F+L RRLGSG I +VY+                
Sbjct: 33  PHKANQAAWQAI-KRLQRATGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPVVGLPQCFYA 91

Query: 93  ------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLT 140
                        K  R  +EKEIL MLDHPFLP+L+AEFEASHYS LV EYCPGGDL  
Sbjct: 92  MKVVDKEALAIRNKLQRAEMEKEILGMLDHPFLPTLYAEFEASHYSCLVTEYCPGGDLYA 151

Query: 141 VSQRQRRLRFSIPSA 155
             QRQ   RFSI SA
Sbjct: 152 ARQRQPWKRFSISSA 166

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|156481452|gb|ABU68435.1| putative serine/threonine protein kinase [Populus tomentosa]

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/135 (51%), Positives = 80/135 (59%), Gaps = 29/135 (21%)

Query: 49  PHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVYI---------------- 92
           PHK NQ A +A+ K LQ+  G+VGLD F+L RRLGSG I +VY+                
Sbjct: 63  PHKANQAAWQAI-KRLQRATGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPVVGLPQCFYA 121

Query: 93  ------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLT 140
                        K  R  +EKEIL MLDHPFLP+L+AEFEASHYS LV EYCPGGDL  
Sbjct: 122 MKVVDKEALAIRNKLQRAEMEKEILGMLDHPFLPTLYAEFEASHYSCLVTEYCPGGDLYA 181

Query: 141 VSQRQRRLRFSIPSA 155
             QRQ   RFSI SA
Sbjct: 182 ARQRQPWKRFSISSA 196

Source: Populus tomentosa

Species: Populus tomentosa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563039|ref|XP_003549773.1| PREDICTED: protein kinase PINOID 2-like [Glycine max]

 Score =  121 bits (304), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 66/138 (47%), Positives = 81/138 (58%), Gaps = 29/138 (21%)

Query: 46  HHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVYI------------- 92
           H  PHK N  A  AM +L +++ GQVGLD F+L RRLGSG I +VY+             
Sbjct: 69  HAKPHKANHAAWEAMRRL-RRDKGQVGLDHFRLLRRLGSGDIGNVYLCQIRNPIVGLPQC 127

Query: 93  ---------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGD 137
                          KK  R  +EKEIL MLDHPFLP+L+ EF+ASHYS L++E+CPGGD
Sbjct: 128 FYAMKVVDREALAIRKKLQRAEMEKEILAMLDHPFLPTLYTEFDASHYSCLLMEFCPGGD 187

Query: 138 LLTVSQRQRRLRFSIPSA 155
           L    QRQ   RFSI S+
Sbjct: 188 LYAARQRQPGKRFSIASS 205

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445430|ref|XP_002285044.1| PREDICTED: protein kinase PINOID 2-like [Vitis vinifera]

 Score =  121 bits (304), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 68/137 (49%), Positives = 81/137 (59%), Gaps = 29/137 (21%)

Query: 47  HTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVYI-------------- 92
           H PHK NQ A  AM K L+ E G+VGLD F++ RRLGSG I +VY+              
Sbjct: 49  HKPHKANQAAWEAM-KRLRGEKGRVGLDHFRMLRRLGSGDIGNVYLCQIRNPVVGLPQSF 107

Query: 93  --------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDL 138
                          K  R  +EKEIL +LDHPFLP+L+AEF+ASHYS LV+E+CPGGDL
Sbjct: 108 YAMKVVDREALAIRNKLQRAEMEKEILGILDHPFLPTLYAEFDASHYSCLVMEFCPGGDL 167

Query: 139 LTVSQRQRRLRFSIPSA 155
               QRQ   RFSI SA
Sbjct: 168 HAARQRQPGKRFSISSA 184

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738919|emb|CBI28164.3| unnamed protein product [Vitis vinifera]

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 68/137 (49%), Positives = 81/137 (59%), Gaps = 29/137 (21%)

Query: 47  HTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVYI-------------- 92
           H PHK NQ A  AM K L+ E G+VGLD F++ RRLGSG I +VY+              
Sbjct: 49  HKPHKANQAAWEAM-KRLRGEKGRVGLDHFRMLRRLGSGDIGNVYLCQIRNPVVGLPQSF 107

Query: 93  --------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDL 138
                          K  R  +EKEIL +LDHPFLP+L+AEF+ASHYS LV+E+CPGGDL
Sbjct: 108 YAMKVVDREALAIRNKLQRAEMEKEILGILDHPFLPTLYAEFDASHYSCLVMEFCPGGDL 167

Query: 139 LTVSQRQRRLRFSIPSA 155
               QRQ   RFSI SA
Sbjct: 168 HAARQRQPGKRFSISSA 184

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2760836|gb|AAB95304.1| putative second messenger-dependent protein kinase [Arabidopsis thaliana]

 Score =  120 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 71/158 (44%), Positives = 90/158 (56%), Gaps = 27/158 (17%)

Query: 24  NSHSSASSCSSRNE--RHLISSYFHHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRR 81
           +S +++ SCSS +    H ++SY    PHK NQ A  AM +L +     VGL+ F+L +R
Sbjct: 214 SSFTASPSCSSISHLSNHGLNSYNQSKPHKANQVAWEAMARLRRCCGRAVGLEHFRLLKR 273

Query: 82  LGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSL 116
           LGSG I SVY+                         KK  R  +EK+IL MLDHPF P+L
Sbjct: 274 LGSGDIGSVYLCQIRGSPETAFYAMKVVDKEAVAVKKKLGRAEMEKKILGMLDHPFCPTL 333

Query: 117 FAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPS 154
           +A FEASHYS LV+EYCPGGDL  V  RQ   RF+I S
Sbjct: 334 YAAFEASHYSFLVMEYCPGGDLYAVRLRQPSKRFTISS 371

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110738299|dbj|BAF01078.1| putative second messenger-dependent protein kinase [Arabidopsis thaliana]

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/159 (44%), Positives = 90/159 (56%), Gaps = 27/159 (16%)

Query: 24  NSHSSASSCSSRN--ERHLISSYFHHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRR 81
           +S +++ SCSS +    H ++SY    PHK NQ A  AM +L +     VGL+ F+L +R
Sbjct: 82  SSFTASPSCSSISHLSNHGLNSYNQSKPHKANQVAWEAMARLRRCCGRAVGLEHFRLLKR 141

Query: 82  LGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSL 116
           LGSG I SVY+                         KK  R  +EK+IL MLDHPF P+L
Sbjct: 142 LGSGDIGSVYLCQIRGSPETAFYAMKVVDKEAVAVKKKLGRAEMEKKILGMLDHPFCPTL 201

Query: 117 FAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
           +A FEASHYS LV+EYCPGGDL  V  RQ   RF+I S 
Sbjct: 202 YAAFEASHYSFLVMEYCPGGDLYAVRLRQPSKRFTISST 240

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42569356|ref|NP_180238.2| protein pinoid2 [Arabidopsis thaliana] gi|75253187|sp|Q64FQ2.1|PID2_ARATH RecName: Full=Protein kinase PINOID 2; AltName: Full=Protein kinase AGC1-10 gi|51944867|gb|AAU14162.1| AGC1-10 [Arabidopsis thaliana] gi|51944869|gb|AAU14163.1| AGC1-10 [Arabidopsis thaliana] gi|330252783|gb|AEC07877.1| protein pinoid2 [Arabidopsis thaliana]

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/159 (44%), Positives = 90/159 (56%), Gaps = 27/159 (16%)

Query: 24  NSHSSASSCSSRN--ERHLISSYFHHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRR 81
           +S +++ SCSS +    H ++SY    PHK NQ A  AM +L +     VGL+ F+L +R
Sbjct: 33  SSFTASPSCSSISHLSNHGLNSYNQSKPHKANQVAWEAMARLRRCCGRAVGLEHFRLLKR 92

Query: 82  LGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSL 116
           LGSG I SVY+                         KK  R  +EK+IL MLDHPF P+L
Sbjct: 93  LGSGDIGSVYLCQIRGSPETAFYAMKVVDKEAVAVKKKLGRAEMEKKILGMLDHPFCPTL 152

Query: 117 FAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
           +A FEASHYS LV+EYCPGGDL  V  RQ   RF+I S 
Sbjct: 153 YAAFEASHYSFLVMEYCPGGDLYAVRLRQPSKRFTISST 191

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	156
TAIR|locus:2043813	525	PID2 "PINOID2" [Arabidopsis th	0.423	0.125	0.611	5e-25
TAIR|locus:2062268	438	PID "PINOID" [Arabidopsis thal	0.403	0.143	0.634	2.5e-20
UNIPROTKB|Q5I6E9	700	Adi3 "AvrPto-dependent Pto-int	0.378	0.084	0.576	3.4e-19
TAIR|locus:2133837	506	D6PKL1 "D6 protein kinase like	0.403	0.124	0.555	4e-19
TAIR|locus:2160922	586	D6PKL2 "D6 protein kinase like	0.378	0.100	0.559	1.2e-17
UNIPROTKB|A6MW92	491	bif2 "Barren inflorescence2" [	0.403	0.128	0.515	3e-16
TAIR|locus:2174885	499	AT5G40030 [Arabidopsis thalian	0.378	0.118	0.491	2.7e-15
UNIPROTKB|Q8H935	963	Vfphot1a "Phototropin" [Vicia	0.326	0.052	0.518	5.2e-15
TAIR|locus:2024892	476	WAG1 "WAG 1" [Arabidopsis thal	0.384	0.126	0.516	8.3e-15
TAIR|locus:2087785	577	AGC1.5 "AGC kinase 1.5" [Arabi	0.378	0.102	0.457	1.5e-14

TAIR|locus:2043813 PID2 "PINOID2" [Arabidopsis thaliana (taxid:3702)]

 Score = 203 (76.5 bits), Expect = 5.0e-25, Sum P(2) = 5.0e-25
 Identities = 41/67 (61%), Positives = 50/67 (74%)

Query:    89 SVYIKKR-NRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRR 147
             +V +KK+  R  +EK+IL MLDHPF P+L+A FEASHYS LV+EYCPGGDL  V  RQ  
Sbjct:   124 AVAVKKKLGRAEMEKKILGMLDHPFCPTLYAAFEASHYSFLVMEYCPGGDLYAVRLRQPS 183

Query:   148 LRFSIPS 154
              RF+I S
Sbjct:   184 KRFTISS 190

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0048825 "cotyledon development" evidence=IGI

TAIR|locus:2062268 PID "PINOID" [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
 Identities = 40/63 (63%), Positives = 50/63 (79%)

Query:    93 KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSI 152
             KK +R  +EK ILKMLDHPFLP+L+AEFEASH+S +V+EYC GGDL ++  RQ   RFS+
Sbjct:   120 KKMHRAEMEKTILKMLDHPFLPTLYAEFEASHFSCIVMEYCSGGDLHSLRHRQPHRRFSL 179

Query:   153 PSA 155
              SA
Sbjct:   180 SSA 182

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS;IDA

GO:0009734 "auxin mediated signaling pathway" evidence=IMP

GO:0009926 "auxin polar transport" evidence=RCA;IMP

GO:0009733 "response to auxin stimulus" evidence=IEP;RCA

GO:0005515 "protein binding" evidence=IPI

GO:0048825 "cotyledon development" evidence=IGI

GO:0004672 "protein kinase activity" evidence=IDA

GO:0042802 "identical protein binding" evidence=IPI

GO:0009986 "cell surface" evidence=IDA

GO:0048766 "root hair initiation" evidence=IMP

GO:0048767 "root hair elongation" evidence=IMP

GO:0048827 "phyllome development" evidence=IGI

GO:0009958 "positive gravitropism" evidence=IMP

GO:0080167 "response to karrikin" evidence=IEP

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048364 "root development" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

UNIPROTKB|Q5I6E9 Adi3 "AvrPto-dependent Pto-interacting protein 3" [Solanum lycopersicum (taxid:4081)]

 Score = 180 (68.4 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
 Identities = 34/59 (57%), Positives = 42/59 (71%)

Query:    93 KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFS 151
             KK  R   E+EIL++LDHPFLP+L+  FE   +S LV+EYCPGGDL T+ QRQ    FS
Sbjct:   348 KKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFS 406

GO:0005515 "protein binding" evidence=IPI

GO:0043069 "negative regulation of programmed cell death" evidence=IMP

TAIR|locus:2133837 D6PKL1 "D6 protein kinase like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
 Identities = 35/63 (55%), Positives = 45/63 (71%)

Query:    93 KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSI 152
             KK  R   E+EIL+ LDHPFLP+L++ FE   +S LV+E+CPGGDL T+ QRQ   RFS 
Sbjct:   163 KKLLRAQTEREILQCLDHPFLPTLYSHFETEKFSCLVMEFCPGGDLHTLRQRQPGKRFSE 222

Query:   153 PSA 155
              +A
Sbjct:   223 QAA 225

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2160922 D6PKL2 "D6 protein kinase like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 169 (64.5 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
 Identities = 33/59 (55%), Positives = 41/59 (69%)

Query:    93 KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFS 151
             KK  R   E+EIL+ LDHPFLP+L+  FE   +S LV+E+CPGGDL T+ QRQ    FS
Sbjct:   231 KKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQRQPGKHFS 289

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

UNIPROTKB|A6MW92 bif2 "Barren inflorescence2" [Zea mays (taxid:4577)]

 Score = 172 (65.6 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
 Identities = 33/64 (51%), Positives = 45/64 (70%)

Query:    93 KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS-HYSRLVIEYCPGGDLLTVSQRQRRLRFS 151
             KK      E+ IL+ LDHPFLP+LFA+F+A+ H+S +V E+CPGGDL ++  R    RF 
Sbjct:   172 KKLEHAAAERRILRALDHPFLPTLFADFDAAPHFSCVVTEFCPGGDLHSLRHRMPNRRFP 231

Query:   152 IPSA 155
             +PSA
Sbjct:   232 LPSA 235

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2174885 AT5G40030 [Arabidopsis thaliana (taxid:3702)]

 Score = 150 (57.9 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
 Identities = 29/59 (49%), Positives = 40/59 (67%)

Query:    93 KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFS 151
             KK  R   E+EIL +LDHPFLP+L++ FE   +S L++E+C GGDL  + Q+Q    FS
Sbjct:   154 KKLVRAQTEREILGLLDHPFLPTLYSHFETEKFSCLLMEFCSGGDLHILRQKQPGKHFS 212

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q8H935 Vfphot1a "Phototropin" [Vicia faba (taxid:3906)]

 Score = 149 (57.5 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
 Identities = 28/54 (51%), Positives = 38/54 (70%)

Query:    95 RNRVH---IEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQ 145
             RN+VH    E+EIL MLDHPFLP+L+A F+   +  L+ +YCPGG+L  +  RQ
Sbjct:   673 RNKVHRACTEREILDMLDHPFLPALYASFQTKTHICLITDYCPGGELFMLLDRQ 726

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2024892 WAG1 "WAG 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 8.3e-15, Sum P(2) = 8.3e-15
 Identities = 31/60 (51%), Positives = 43/60 (71%)

Query:    93 KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSI 152
             KK + V  E EIL +LDHPFLP+L+A  +ASHY+ L+I+YCP GDL ++ ++Q   R  I
Sbjct:   134 KKISHVETEAEILSLLDHPFLPTLYARIDASHYTCLLIDYCPNGDLHSLLRKQPNNRLPI 193

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009630 "gravitropism" evidence=IMP

GO:0009926 "auxin polar transport" evidence=IMP

GO:0048364 "root development" evidence=IGI

GO:0048825 "cotyledon development" evidence=IGI

TAIR|locus:2087785 AGC1.5 "AGC kinase 1.5" [Arabidopsis thaliana (taxid:3702)]

 Score = 143 (55.4 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
 Identities = 27/59 (45%), Positives = 41/59 (69%)

Query:    97 RVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
             R   E+EIL +LDHPFLP+L++ FE   +  LV+E+C GG+L ++ Q+Q   RF+  +A
Sbjct:   229 RAQTEREILSLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPSRRFTEEAA 287

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0009826 "unidimensional cell growth" evidence=IGI

GO:0009860 "pollen tube growth" evidence=IGI;RCA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	156
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	6e-19
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-09
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	7e-09
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-07
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	4e-07
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	5e-07
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-06
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	1e-06
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	8e-06
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	1e-05
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	1e-05
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	1e-05
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	2e-05
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	3e-05
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	3e-05
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-05
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	5e-05
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	5e-05
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	6e-05
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	9e-05
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-04
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	2e-04
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	2e-04
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	3e-04
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	3e-04
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	4e-04
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	7e-04
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	0.001
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	0.001
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	0.001
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	0.001
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	0.002
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	0.002
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	0.002
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	0.002
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	0.003
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	0.004
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	0.004

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 80.8 bits (200), Expect = 6e-19
 Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 23/105 (21%)

Query: 74  DQFQLFRRLGSGIIRSVY--------------------IKKRNRVH---IEKEILKMLDH 110
             F+  + LG G +  V+                    + KRN+V     E+EIL  LDH
Sbjct: 1   KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDH 60

Query: 111 PFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
           PFLP+L+A F+   Y  LV++YCPGG+L  + QRQ     S   A
Sbjct: 61  PFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVA 105

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 54.8 bits (133), Expect = 1e-09
 Identities = 25/63 (39%), Positives = 35/63 (55%)

Query: 86  IIRSVYIKKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQ 145
           I +    K R R+  E +ILK L HP +  L+  FE      LV+EYC GGDL  + +++
Sbjct: 32  IKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKR 91

Query: 146 RRL 148
            RL
Sbjct: 92  GRL 94

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 52.5 bits (127), Expect = 7e-09
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 3/60 (5%)

Query: 92  IKKRNRV---HIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
           I KR  V     E+ IL  ++HPF+  L   F+      LV+EY PGG+L +   ++ R 
Sbjct: 31  IIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGRF 90

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 49.1 bits (118), Expect = 1e-07
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%)

Query: 92  IKKRNRVHI--EKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLR 149
           +K +   H+  EK IL+ + HPFL +L+  F+      LV+EY PGG+L +  ++    R
Sbjct: 40  VKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSG--R 97

Query: 150 FSIPSA 155
           F  P A
Sbjct: 98  FPEPVA 103

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 47.6 bits (114), Expect = 4e-07
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%)

Query: 86  IIRSVYIKKR--NRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTV 141
           I ++  I+K   ++V  E++IL     P++  L+  F+      LV+EY PGGDL ++
Sbjct: 26  IKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASL 83

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 47.2 bits (113), Expect = 5e-07
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 24/90 (26%)

Query: 74  DQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLD- 109
           D F+  + +G G   +V +                       KK   V IEKE+L  L+ 
Sbjct: 1   DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNG 60

Query: 110 HPFLPSLFAEFEASHYSRLVIEYCPGGDLL 139
           HP +  L+  F+       V+EY P G+LL
Sbjct: 61  HPGIIKLYYTFQDEENLYFVLEYAPNGELL 90

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 46.1 bits (110), Expect = 1e-06
 Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 8/59 (13%)

Query: 91  YIKKRNRV------HI--EKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTV 141
            +KKR+ V      HI  EKEIL+  +HPF+  L+  F+   Y  +++EYC GG+L T+
Sbjct: 25  CVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTI 83

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 45.9 bits (109), Expect = 1e-06
 Identities = 20/62 (32%), Positives = 33/62 (53%)

Query: 86  IIRSVYIKKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQ 145
           I   + +K+   VH EK +LK + HPF+  LF       +  +++EY PGG+L +  +  
Sbjct: 36  IPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNS 95

Query: 146 RR 147
            R
Sbjct: 96  GR 97

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 43.8 bits (104), Expect = 8e-06
 Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 22/95 (23%)

Query: 76  FQLFRRLGSGIIRSVY---------------IKKRNRVHIEKE-------ILKMLDHPFL 113
           ++L R+LGSG   +VY               +KKR+    + +       IL+ L HP +
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNI 60

Query: 114 PSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
             L   FE   +  LV+EYC GGDL     R   L
Sbjct: 61  VRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPL 95

Length = 260

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 3/50 (6%)

Query: 95  RNRVH---IEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTV 141
           RN++    +E++IL   ++PF+ S+F  FE   +  +V+EY  GGD  T+
Sbjct: 42  RNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATL 91

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 43.3 bits (102), Expect = 1e-05
 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 98  VHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
           V  EK + +   +HPFL  L + F+       VIE+  GGDL+   QRQR+L
Sbjct: 42  VQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKL 93

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 43.1 bits (102), Expect = 1e-05
 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 101 EKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
           EK +L +   HPFL  L + F+       V+EY  GGDL+   QR    RF  P A
Sbjct: 45  EKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSG--RFDEPRA 98

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 42.5 bits (100), Expect = 2e-05
 Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 2/58 (3%)

Query: 86  IIRSVYIKKRNRVHI--EKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTV 141
           +++S   KK    H+  E+++L   D P++ SL+  F+ + Y  L++E+ PGGDL+T+
Sbjct: 34  LLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTM 91

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 42.7 bits (100), Expect = 3e-05
 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)

Query: 84  SGIIRSVYIKKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQ 143
           S II+    K+ + V  E++IL  ++HPF  +L+  F+   Y  LV+E+  GG+  T  +
Sbjct: 67  SKIIKQ---KQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLR 123

Query: 144 RQRRL 148
           R +R 
Sbjct: 124 RNKRF 128

Length = 340

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 42.5 bits (100), Expect = 3e-05
 Identities = 18/44 (40%), Positives = 28/44 (63%)

Query: 101 EKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQR 144
           E++IL + + P++P L   F+      LV+EY PGGDLL++  R
Sbjct: 51  ERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNR 94

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 41.8 bits (99), Expect = 3e-05
 Identities = 19/55 (34%), Positives = 28/55 (50%)

Query: 93  KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRR 147
                +  E EILK L+HP +  L+  FE  ++  LV+EYC GG L  + +    
Sbjct: 33  SLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEG 87

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 41.8 bits (98), Expect = 5e-05
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 100 IEKEILKM-LDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRR 147
            EK IL +   HPFL +L   F+       V+EY  GGDL+   QR R+
Sbjct: 44  TEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRK 92

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 41.5 bits (97), Expect = 5e-05
 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 5/71 (7%)

Query: 88  RSVYIKKRNRVHIEKE---ILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQR 144
           +   +KK+ + HI  E   +LK L HPFL  L   F+ +     V++Y  GG+L    QR
Sbjct: 30  KKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQR 89

Query: 145 QRRLRFSIPSA 155
           +R   F  P A
Sbjct: 90  ER--CFLEPRA 98

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 41.5 bits (98), Expect = 6e-05
 Identities = 18/52 (34%), Positives = 29/52 (55%)

Query: 98  VHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLR 149
           V  E++IL   D P++  L+  F+   +  LV+EY PGGDL+ +  R+    
Sbjct: 48  VRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFP 99

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 40.6 bits (96), Expect = 9e-05
 Identities = 20/61 (32%), Positives = 31/61 (50%)

Query: 93  KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSI 152
           K+R     E +ILK L+HP +   +  FE      +V+EY  GGDL    ++Q++     
Sbjct: 41  KEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPF 100

Query: 153 P 153
           P
Sbjct: 101 P 101

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 40.3 bits (94), Expect = 1e-04
 Identities = 21/60 (35%), Positives = 34/60 (56%)

Query: 92  IKKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFS 151
           +K++     E  +L  + HP + + FA F+ +    +V+EYC GGDL+    RQR + FS
Sbjct: 40  VKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFS 99

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 98  VHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
           V  EK + +   +HPFL  L + F+       VIEY  GGDL+   QRQR+L
Sbjct: 42  VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKL 93

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 2/51 (3%)

Query: 92  IKKRNRVHI--EKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLT 140
           ++K    H+  E++IL   D+P++  L+  F+  +Y  L++EY PGGD++T
Sbjct: 40  LEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMT 90

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 39.4 bits (92), Expect = 3e-04
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 7/70 (10%)

Query: 88  RSVYIKKRNRVHI--EKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQ 145
           + V I K    H   E  +L+   HPFL +L   F+       V+EY  GG+L     R+
Sbjct: 30  KEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE 89

Query: 146 R-----RLRF 150
           R     R RF
Sbjct: 90  RVFSEDRARF 99

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 39.3 bits (92), Expect = 3e-04
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 6/58 (10%)

Query: 101 EKEILKMLD---HPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
           EK I +  +   HPFL +LFA F+   +   V+EY  GGDL+          FS P A
Sbjct: 49  EKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTD---VFSEPRA 103

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 38.9 bits (90), Expect = 4e-04
 Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 98  VHIEKEILKMLD-HPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
           V  EK + +    +PFL  L + F+ +    LVIEY  GGDL+   QRQR+L
Sbjct: 42  VQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKL 93

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 38.5 bits (89), Expect = 7e-04
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 101 EKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTV 141
           E++I+   + P++  LF  F+   Y  +V+EY PGGDL+ +
Sbjct: 93  ERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNL 133

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 101 EKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTV 141
           E++I+   + P++  LF  F+   Y  +V+EY PGGDL+ +
Sbjct: 93  ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL 133

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 37.5 bits (87), Expect = 0.001
 Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 6/68 (8%)

Query: 92  IKKRNRV-HIEKE---ILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRR 147
           I K+    HI  E   +LK + HPFL  L   F+ +     V++Y  GG+L    QR+R 
Sbjct: 33  ILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRER- 91

Query: 148 LRFSIPSA 155
             F  P A
Sbjct: 92  -SFPEPRA 98

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 37.3 bits (87), Expect = 0.001
 Identities = 16/38 (42%), Positives = 24/38 (63%)

Query: 101 EKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDL 138
           E+ IL+ L+HPFL +L+  F+      LV++   GGDL
Sbjct: 50  ERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDL 87

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 8/71 (11%)

Query: 88  RSVYIKKRNRVHIEKE---ILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQR 144
           +   +KK+   HI  E   +LK + HPFL  L   F+ +     V++Y  GG+L    QR
Sbjct: 30  KKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQR 89

Query: 145 QR-----RLRF 150
           +R     R RF
Sbjct: 90  ERCFLEPRARF 100

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 37.2 bits (86), Expect = 0.002
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 101 EKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
           EK IL +  +HPFL  L+  F+       V+E+  GGDL+   Q+ RR 
Sbjct: 45  EKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRF 93

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)

Query: 100 IEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
           +EK +L +  +HPFL  L+  F+       V+EY  GGDL+   Q     +F +P A
Sbjct: 44  VEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCH--KFDLPRA 98

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 36.7 bits (85), Expect = 0.002
 Identities = 18/59 (30%), Positives = 27/59 (45%)

Query: 93  KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFS 151
           K+R     E  +L  + HP +      FE +    +V++YC GGDL      QR + F 
Sbjct: 41  KEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFP 99

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 36.7 bits (86), Expect = 0.002
 Identities = 16/40 (40%), Positives = 19/40 (47%)

Query: 101 EKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLT 140
           E  I+K L HP +  L           +V EY PGGDLL 
Sbjct: 51  EASIMKKLSHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLD 90

Length = 258

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 36.7 bits (85), Expect = 0.003
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 100 IEKEILKM-LDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
           +E+ +L +  +HPFL  LF  F+   +   V+EY  GGDL+     Q   RF    A
Sbjct: 44  VERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLM--FHIQSSGRFDEARA 98

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 36.2 bits (84), Expect = 0.004
 Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 23/89 (25%)

Query: 75  QFQLFRRLGSGIIRSVYI-KKRN--------------------RVHI--EKEILKMLDHP 111
            FQ+  ++G G    V++ KK++                      H+  E++IL      
Sbjct: 2   DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSE 61

Query: 112 FLPSLFAEFEASHYSRLVIEYCPGGDLLT 140
           +L  L   F+   Y  L +EY PGGD  T
Sbjct: 62  WLVKLLYAFQDDEYLYLAMEYVPGGDFRT 90

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 12/97 (12%)

Query: 69  GQVGLDQFQLFRRLGSGIIRSVYIKKRNRV---------HIEKEILKMLDHP-FLPSLFA 118
           G+    +  L  R G+  + ++ I K++ V          +EK +L + D P FL  L +
Sbjct: 9   GKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHS 68

Query: 119 EFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
            F+       V+EY  GGDL+     Q+  +F  P A
Sbjct: 69  CFQTVDRLYFVMEYVNGGDLMY--HIQQVGKFKEPQA 103

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	156
KOG0610	459	consensus Putative serine/threonine protein kinase	99.79
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.79
KOG0605	550	consensus NDR and related serine/threonine kinases	99.75
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.75
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.71
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.67
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.66
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.65
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.65
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.62
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.58
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.57
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.54
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.54
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.53
KOG0586	596	consensus Serine/threonine protein kinase [General	99.53
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.52
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.52
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.52
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.52
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.51
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.5
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.5
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.5
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.5
KOG0589	426	consensus Serine/threonine protein kinase [General	99.49
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.49
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.49
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.48
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.47
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.47
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.46
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.46
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.45
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.45
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.45
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.44
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.44
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.43
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.43
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.42
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.42
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.42
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.41
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.41
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.4
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.39
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.39
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.38
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.38
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.37
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.37
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.37
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.37
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.37
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.36
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.36
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.36
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.35
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.35
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.35
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.34
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.33
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.33
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.32
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.32
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.32
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.32
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.32
KOG0198	313	consensus MEKK and related serine/threonine protei	99.31
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.31
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.31
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.31
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.31
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.3
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.3
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.3
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.3
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.3
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.29
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.29
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.29
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.29
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.28
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.28
PTZ00267	478	NIMA-related protein kinase; Provisional	99.28
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.27
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.27
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.27
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.27
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.27
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.26
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.26
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.26
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.26
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.26
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.26
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.25
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.25
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.25
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.25
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.25
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.25
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.25
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.25
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.25
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.25
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.24
KOG1152	772	consensus Signal transduction serine/threonine kin	99.24
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.24
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.24
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.24
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.23
PHA03212	391	serine/threonine kinase US3; Provisional	99.23
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.23
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.23
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.23
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.23
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.22
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.22
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.22
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.22
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.22
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.22
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.22
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.22
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.22
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.22
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.22
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.21
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.21
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.21
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.21
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.21
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.21
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.21
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.2
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.2
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.2
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.2
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.2
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.2
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.2
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.2
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.2
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.2
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.19
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.19
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.19
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.19
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.19
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.19
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.19
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.19
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.19
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.19
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.18
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.18
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.18
PHA02988	283	hypothetical protein; Provisional	99.18
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.18
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.18
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.18
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.18
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.18
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.18
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.18
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.18
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.17
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.17
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.17
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.17
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.17
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.17
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.17
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.17
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.17
KOG0584	632	consensus Serine/threonine protein kinase [General	99.17
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.17
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.17
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.16
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.16
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.16
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.16
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.16
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.16
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.16
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.16
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.16
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.16
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.16
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.16
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.16
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.16
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.15
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.15
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.15
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.15
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.15
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.15
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.14
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.14
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.14
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.14
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.14
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.14
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.13
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.13
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.13
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.13
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.13
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.13
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.13
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.13
PHA03207	392	serine/threonine kinase US3; Provisional	99.12
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.12
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.12
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.12
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.12
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.12
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.12
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.12
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.11
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.11
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.1
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.1
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.1
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.1
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.1
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.09
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.09
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.09
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.09
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.09
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.09
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.09
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.09
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.08
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.08
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.08
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.08
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.08
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.08
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.08
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.07
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.07
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.07
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.07
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.07
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.07
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.06
PHA03209	357	serine/threonine kinase US3; Provisional	99.06
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.06
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.06
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.05
PHA03211	461	serine/threonine kinase US3; Provisional	99.05
PLN00009	294	cyclin-dependent kinase A; Provisional	99.05
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.05
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.05
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.05
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.05
PRK10345	210	hypothetical protein; Provisional	99.04
KOG0578	550	consensus p21-activated serine/threonine protein k	99.04
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.04
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.03
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.03
PHA03210	501	serine/threonine kinase US3; Provisional	99.03
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.03
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.03
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.02
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.02
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.02
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.02
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.02
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.02
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.02
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.01
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.01
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.01
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	98.99
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.99
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	98.99
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	98.99
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	98.98
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	98.98
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.97
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	98.97
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	98.97
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	98.96
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	98.95
PTZ00283	496	serine/threonine protein kinase; Provisional	98.95
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	98.95
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	98.95
PTZ00036	440	glycogen synthase kinase; Provisional	98.95
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	98.94
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	98.94
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.94
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.94
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	98.93
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	98.93
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.93
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	98.93
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.91
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.91
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.91
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.91
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.91
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.91
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.91
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	98.9
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.9
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.9
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	98.9
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.9
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	98.9
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.9
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	98.89
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.89
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.89
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.89
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	98.88
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	98.88
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	98.88
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.87
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.87
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.87
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	98.87
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.87
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.87
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	98.87
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	98.87
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	98.86
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.86
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	98.85
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.85
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	98.85
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.85
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.85
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.84
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.84
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.84
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	98.84
KOG2052	513	consensus Activin A type IB receptor, serine/threo	98.84
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.84
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	98.84
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	98.83
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.83
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.82
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.82
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	98.81
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.8
PRK09188	365	serine/threonine protein kinase; Provisional	98.79
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.79
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	98.78
PTZ00284	467	protein kinase; Provisional	98.78
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.78
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	98.77
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.76
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.75
KOG0577	948	consensus Serine/threonine protein kinase [Signal	98.74
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.74
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	98.74
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.74
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.73
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.73
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.73
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.71
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.71
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.7
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.69
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	98.69
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.69
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.67
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	98.66
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.65
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.64
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.62
KOG3653	534	consensus Transforming growth factor beta/activin	98.62
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.54
KOG0596	677	consensus Dual specificity; serine/threonine and t	98.53
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.53
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.44
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.42
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.42
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.41
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.4
PRK14879	211	serine/threonine protein kinase; Provisional	98.37
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.34
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	98.32
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.27
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.16
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.1
PRK12274	218	serine/threonine protein kinase; Provisional	98.09
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.02
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	98.01
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.01
PHA02882	294	putative serine/threonine kinase; Provisional	97.95
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	97.93
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	97.92
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	97.86
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	97.8
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	97.77
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	97.75
COG0515	384	SPS1 Serine/threonine protein kinase [General func	97.75
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	97.75
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	97.6
KOG1167	418	consensus Serine/threonine protein kinase of the C	97.49
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.44
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	97.41
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	97.36
KOG1027	903	consensus Serine/threonine protein kinase and endo	97.33
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	97.26
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	97.21
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	97.17
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.11
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	96.91
smart00090	237	RIO RIO-like kinase.	96.88
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	96.73
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	96.58
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	96.41
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	95.37
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	95.35
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	95.07
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	94.7
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	94.08
KOG1243	690	consensus Protein kinase [General function predict	94.0
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	93.77
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	93.42
PRK10593	297	hypothetical protein; Provisional	93.35
KOG0590	601	consensus Checkpoint kinase and related serine/thr	93.08
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	92.7
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	92.45
KOG0590	601	consensus Checkpoint kinase and related serine/thr	92.29
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	92.23
PLN02876	822	acyl-CoA dehydrogenase	91.62
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	91.17
KOG3087	229	consensus Serine/threonine protein kinase [General	86.69
PF01636	239	APH: Phosphotransferase enzyme family This family	85.45
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	85.07
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	84.93
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	83.76
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	82.68
KOG1266	458	consensus Protein kinase [Signal transduction mech	82.32
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	81.9
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	81.61
KOG0606	1205	consensus Microtubule-associated serine/threonine	80.73

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.79  E-value=1.2e-19  Score=138.14  Aligned_cols=112  Identities=47%  Similarity=0.843  Sum_probs=100.4

Q ss_pred             ccCCCCCCCchhHHHHHHHhhhccCCccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHH
Q 043174           45 FHHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIE  101 (156)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E  101 (156)
                      ...+|+...+..|+++..........+..++|++++.||.|.-|.||+                       +....+..|
T Consensus        48 ~~~kph~~~d~~w~a~~~~~~~~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE  127 (459)
T KOG0610|consen   48 SGNKPHKGNDVRWEAISSIRNSKDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTE  127 (459)
T ss_pred             ccCCCCCCCchhhhhhccccccCCCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHH
Confidence            346788888888999887733567788899999999999999999999                       445678889


Q ss_pred             HHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCHHHHHHhcCCCCCCCCCcC
Q 043174          102 KEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus       102 ~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      .+||..++||+++.||..|+.+...|++||||+||||..++++++.++|+|+.||
T Consensus       128 ~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aR  182 (459)
T KOG0610|consen  128 REILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAAR  182 (459)
T ss_pred             HHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHH
Confidence            9999999999999999999999999999999999999999999999999998875

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.79  E-value=1.9e-19  Score=136.90  Aligned_cols=83  Identities=35%  Similarity=0.529  Sum_probs=75.1

Q ss_pred             cCCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      ..++|.+.+.||.|+|+.||+                      +.++.+..|+++|+.++|||||+++++.++++.+|+|
T Consensus         8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV   87 (429)
T KOG0595|consen    8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV   87 (429)
T ss_pred             ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence            357899999999999999999                      2355678999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCCCcC
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      ||||.||||..||+++  +.++|+-+|
T Consensus        88 MEyC~gGDLs~yi~~~--~~l~e~t~r  112 (429)
T KOG0595|consen   88 MEYCNGGDLSDYIRRR--GRLPEATAR  112 (429)
T ss_pred             EEeCCCCCHHHHHHHc--CCCCHHHHH
Confidence            9999999999999996  788887553

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.75  E-value=1.6e-18  Score=135.51  Aligned_cols=90  Identities=29%  Similarity=0.589  Sum_probs=83.4

Q ss_pred             hhccCCccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEE
Q 043174           65 QQEHGQVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFE  121 (156)
Q Consensus        65 ~~~~~~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~  121 (156)
                      +....++..++|+++++||+|+||.||+                       .++.++..|..+|...++|+||+|+..|+
T Consensus       132 R~~R~r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQ  211 (550)
T KOG0605|consen  132 RLRRTRLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQ  211 (550)
T ss_pred             HhccccCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEec
Confidence            4566688999999999999999999999                       45678999999999999999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhcCCCCCCCCCcC
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      |...+||||||++|||+..+|.+.  +.|+|++||
T Consensus       212 D~~~LYLiMEylPGGD~mTLL~~~--~~L~e~~ar  244 (550)
T KOG0605|consen  212 DKEYLYLIMEYLPGGDMMTLLMRK--DTLTEDWAR  244 (550)
T ss_pred             CCCeeEEEEEecCCccHHHHHHhc--CcCchHHHH
Confidence            999999999999999999999986  999999875

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.75  E-value=4e-18  Score=128.15  Aligned_cols=85  Identities=33%  Similarity=0.582  Sum_probs=78.6

Q ss_pred             CccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      ....++|+++++||+|+||+|+.                       +..+....|..||..++||+||+++..|++...+
T Consensus        21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kL  100 (357)
T KOG0598|consen   21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKL  100 (357)
T ss_pred             cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeE
Confidence            45678999999999999999999                       3456789999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCCCcC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      |+|+||+.||+|+.+|++.  +.|+|+.||
T Consensus       101 ylVld~~~GGeLf~hL~~e--g~F~E~~ar  128 (357)
T KOG0598|consen  101 YLVLDYLNGGELFYHLQRE--GRFSEDRAR  128 (357)
T ss_pred             EEEEeccCCccHHHHHHhc--CCcchhHHH
Confidence            9999999999999999987  999999875

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.71  E-value=3.1e-17  Score=120.78  Aligned_cols=84  Identities=36%  Similarity=0.668  Sum_probs=80.2

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEE
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR  127 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~  127 (156)
                      ..+++|+.++.||.|+||+|.+                       ++.++..+|..||+.+.||+++++++.+.|...+|
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly  120 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY  120 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence            7889999999999999999999                       67788999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCCCcC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      +||||++||+|+.++++.  ++|+|.+||
T Consensus       121 mvmeyv~GGElFS~Lrk~--~rF~e~~ar  147 (355)
T KOG0616|consen  121 MVMEYVPGGELFSYLRKS--GRFSEPHAR  147 (355)
T ss_pred             EEEeccCCccHHHHHHhc--CCCCchhHH
Confidence            999999999999999996  899999986

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.67  E-value=1.6e-16  Score=125.89  Aligned_cols=81  Identities=31%  Similarity=0.497  Sum_probs=76.0

Q ss_pred             CCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ..|...+.||+|+|..||.                       ++.+.+.+||+|.+.+.|||||+++++|+|.+++|||.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            5599999999999999999                       45678999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCCcC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      |+|..|+|..+++++  +.++|.+||
T Consensus        98 ELC~~~sL~el~Krr--k~ltEpEar  121 (592)
T KOG0575|consen   98 ELCHRGSLMELLKRR--KPLTEPEAR  121 (592)
T ss_pred             EecCCccHHHHHHhc--CCCCcHHHH
Confidence            999999999999975  999999886

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.66  E-value=2.9e-16  Score=119.94  Aligned_cols=84  Identities=30%  Similarity=0.371  Sum_probs=72.9

Q ss_pred             CccCCCeEEEEEeccCCceEEEe-----------------------c----hhhhHHHHHHHHHhCCCCCCCceeEEEEe
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI-----------------------K----KRNRVHIEKEILKMLDHPFLPSLFAEFEA  122 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~-----------------------~----~~~~~~~E~~~l~~~~h~~iv~l~~~~~~  122 (156)
                      +...+.|.+.+.||+|+||.|.+                       +    ......+|++||++++|||||+++++|+.
T Consensus       168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~  247 (475)
T KOG0615|consen  168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV  247 (475)
T ss_pred             chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec
Confidence            34567789999999999999998                       0    11235799999999999999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          123 SHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       123 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      ++..|+||||+.||+|++.+-.+  +.+.|+..
T Consensus       248 ~ds~YmVlE~v~GGeLfd~vv~n--k~l~ed~~  278 (475)
T KOG0615|consen  248 PDSSYMVLEYVEGGELFDKVVAN--KYLREDLG  278 (475)
T ss_pred             CCceEEEEEEecCccHHHHHHhc--cccccchh
Confidence            99999999999999999999987  88887653

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.65  E-value=5.3e-17  Score=116.40  Aligned_cols=88  Identities=33%  Similarity=0.497  Sum_probs=78.8

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      .....+++|++.+.||+|.||.||+                       ...+.+.+|++|...++||||+++|++|.|..
T Consensus        16 ~~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~   95 (281)
T KOG0580|consen   16 TKTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK   95 (281)
T ss_pred             ccccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccc
Confidence            3456789999999999999999999                       22356899999999999999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      .+|+++||.+.|+|+..|+..+.+.|+|..|
T Consensus        96 riyLilEya~~gel~k~L~~~~~~~f~e~~~  126 (281)
T KOG0580|consen   96 RIYLILEYAPRGELYKDLQEGRMKRFDEQRA  126 (281)
T ss_pred             eeEEEEEecCCchHHHHHHhcccccccccch
Confidence            9999999999999999999776788988764

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.65  E-value=3.6e-16  Score=123.19  Aligned_cols=81  Identities=20%  Similarity=0.382  Sum_probs=74.2

Q ss_pred             hhccCCccCCCeEEEEEeccCCceEEEe---------------------------chhhhHHHHHHHHHhCCCCCCCcee
Q 043174           65 QQEHGQVGLDQFQLFRRLGSGIIRSVYI---------------------------KKRNRVHIEKEILKMLDHPFLPSLF  117 (156)
Q Consensus        65 ~~~~~~~~~~~~~~~~~lG~G~~g~V~~---------------------------~~~~~~~~E~~~l~~~~h~~iv~l~  117 (156)
                      ..+.+.+..++..+.++||+|+||.||+                           .++..+++|+++|++++|||||+++
T Consensus       148 ~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~y  227 (474)
T KOG0194|consen  148 PRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFY  227 (474)
T ss_pred             cccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence            4566788888999999999999999999                           2345789999999999999999999


Q ss_pred             EEEEeCCeEEEEEeccCCCCHHHHHHhc
Q 043174          118 AEFEASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       118 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      |+..+..++++|||+|+||+|.++|++.
T Consensus       228 GVa~~~~Pl~ivmEl~~gGsL~~~L~k~  255 (474)
T KOG0194|consen  228 GVAVLEEPLMLVMELCNGGSLDDYLKKN  255 (474)
T ss_pred             EEEcCCCccEEEEEecCCCcHHHHHHhC
Confidence            9999999999999999999999999987

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.62  E-value=7.2e-17  Score=123.64  Aligned_cols=82  Identities=24%  Similarity=0.435  Sum_probs=74.2

Q ss_pred             CCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      ...|++.+.||+|.||+|-+                       ...-.+++||+||..++||||+++|.+|+..+.+.||
T Consensus        52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv  131 (668)
T KOG0611|consen   52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV  131 (668)
T ss_pred             hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence            35688899999999999998                       1234689999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCCCcC
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      |||..+|+|++||.++  +.++|.+||
T Consensus       132 MEYaS~GeLYDYiSer--~~LsErEaR  156 (668)
T KOG0611|consen  132 MEYASGGELYDYISER--GSLSEREAR  156 (668)
T ss_pred             EEecCCccHHHHHHHh--ccccHHHHH
Confidence            9999999999999997  899998875

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.58  E-value=3.9e-15  Score=117.05  Aligned_cols=85  Identities=32%  Similarity=0.470  Sum_probs=78.3

Q ss_pred             CccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCe
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHY  125 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~  125 (156)
                      +....+|...+.||+|+|++|++                       +....+.+|..+|..+ .||.|++|+..|+|+..
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s  148 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES  148 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence            66789999999999999999999                       3445678899999999 89999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCCCcC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      +|+|+||+++|+|.++|++.  |.|+|.+||
T Consensus       149 LYFvLe~A~nGdll~~i~K~--Gsfde~caR  177 (604)
T KOG0592|consen  149 LYFVLEYAPNGDLLDLIKKY--GSFDETCAR  177 (604)
T ss_pred             eEEEEEecCCCcHHHHHHHh--CcchHHHHH
Confidence            99999999999999999997  999998876

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.57  E-value=5.5e-16  Score=122.67  Aligned_cols=81  Identities=27%  Similarity=0.513  Sum_probs=74.1

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      +++|.+.+.||+|+||.||+                      |.++.+.+|++|++.++|||||.++++|++...+++|.
T Consensus         1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt   80 (808)
T KOG0597|consen    1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT   80 (808)
T ss_pred             CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence            36788889999999999999                      45667999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCCcC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      |||.| +|+.+|...  +.++|+.+|
T Consensus        81 e~a~g-~L~~il~~d--~~lpEe~v~  103 (808)
T KOG0597|consen   81 EYAVG-DLFTILEQD--GKLPEEQVR  103 (808)
T ss_pred             hhhhh-hHHHHHHhc--cCCCHHHHH
Confidence            99987 999999985  999998764

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.54  E-value=1e-14  Score=116.96  Aligned_cols=86  Identities=23%  Similarity=0.442  Sum_probs=77.0

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      .+....-|..++.||-|+||.|++                       .+..+...|.+||...++.+||+||..|+|++.
T Consensus       624 aKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdn  703 (1034)
T KOG0608|consen  624 AKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDN  703 (1034)
T ss_pred             hhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCc
Confidence            345567799999999999999999                       234567889999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCCCcC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      +|+||||++|||+..+|.+.  +.|.|+.||
T Consensus       704 LYFVMdYIPGGDmMSLLIrm--gIFeE~LAR  732 (1034)
T KOG0608|consen  704 LYFVMDYIPGGDMMSLLIRM--GIFEEDLAR  732 (1034)
T ss_pred             eEEEEeccCCccHHHHHHHh--ccCHHHHHH
Confidence            99999999999999999985  999998876

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.54  E-value=4.2e-15  Score=119.39  Aligned_cols=85  Identities=35%  Similarity=0.598  Sum_probs=74.7

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCC
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASH  124 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~  124 (156)
                      .++.+++|.++++||+|+||+|++                       ..++..+.|..|+..+ +||++++|+.+|++..
T Consensus       363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~  442 (694)
T KOG0694|consen  363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE  442 (694)
T ss_pred             CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence            478899999999999999999999                       3467789999999988 5999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCCcC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      ++|+||||+.|||+..+++.   +.|+|..||
T Consensus       443 ~l~fvmey~~Ggdm~~~~~~---~~F~e~rar  471 (694)
T KOG0694|consen  443 HLFFVMEYVAGGDLMHHIHT---DVFSEPRAR  471 (694)
T ss_pred             eEEEEEEecCCCcEEEEEec---ccccHHHHH
Confidence            99999999999995554443   789998775

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.53  E-value=1.4e-16  Score=116.88  Aligned_cols=85  Identities=27%  Similarity=0.482  Sum_probs=70.9

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeE-EEEeCC-
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFA-EFEASH-  124 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~-~~~~~~-  124 (156)
                      +...+.+|++.+.||+|+||.||+                      +..+.+..|+.+|++++|||||++++ .|..++ 
T Consensus        14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~e   93 (375)
T KOG0591|consen   14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNE   93 (375)
T ss_pred             CcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccch
Confidence            455677899999999999999999                      55678999999999999999999998 455444 


Q ss_pred             eEEEEEeccCCCCHHHHHHhcC--CCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQR--RLRFSIP  153 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~--~~~~~e~  153 (156)
                      -++|+||||.+|||.+.|+..+  .+.++|.
T Consensus        94 vlnivmE~c~~GDLsqmIk~~K~qkr~ipE~  124 (375)
T KOG0591|consen   94 VLNIVMELCDAGDLSQMIKHFKKQKRLIPEK  124 (375)
T ss_pred             hhHHHHHhhcccCHHHHHHHHHhccccCchH
Confidence            4999999999999999997643  3456654

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.53  E-value=3.4e-14  Score=112.92  Aligned_cols=85  Identities=27%  Similarity=0.475  Sum_probs=76.7

Q ss_pred             CccCCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEE
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR  127 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~  127 (156)
                      ......|.+.+.||+|.|+.|.+                      ..++.+.+|+++|..++|||||+++.+.+....+|
T Consensus        52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly  131 (596)
T KOG0586|consen   52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY  131 (596)
T ss_pred             cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence            44568899999999999999999                      34567899999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCCCcC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      +||||+.+|++++||.++  ++..|..||
T Consensus       132 lV~eya~~ge~~~yl~~~--gr~~e~~ar  158 (596)
T KOG0586|consen  132 LVMEYASGGELFDYLVKH--GRMKEKEAR  158 (596)
T ss_pred             EEEEeccCchhHHHHHhc--ccchhhhhh
Confidence            999999999999999997  888876654

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.52  E-value=5.5e-15  Score=115.54  Aligned_cols=79  Identities=27%  Similarity=0.382  Sum_probs=67.0

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      ....+++++.||+|.||.|+.                  -..+.|.+|+.||++++|++||++++++..++++||||||+
T Consensus       204 ~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m  283 (468)
T KOG0197|consen  204 PREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYM  283 (468)
T ss_pred             cHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEec
Confidence            334456678899999999999                  12367889999999999999999999999989999999999


Q ss_pred             CCCCHHHHHHhcCCCCC
Q 043174          134 PGGDLLTVSQRQRRLRF  150 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~  150 (156)
                      +.|+|.++|+...++.+
T Consensus       284 ~~GsLl~yLr~~~~~~l  300 (468)
T KOG0197|consen  284 PKGSLLDYLRTREGGLL  300 (468)
T ss_pred             ccCcHHHHhhhcCCCcc
Confidence            99999999997423433

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.52  E-value=6.7e-15  Score=116.91  Aligned_cols=77  Identities=22%  Similarity=0.315  Sum_probs=69.6

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      .++..+.+.+.+.||+|.||.|-+                    ..+..|..||++|.+++||||++|+|+|..++++++
T Consensus       533 ~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicm  612 (807)
T KOG1094|consen  533 VEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCM  612 (807)
T ss_pred             hhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHH
Confidence            345567788899999999999988                    234689999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhc
Q 043174          129 VIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~  145 (156)
                      ++||+++|+|.+++.++
T Consensus       613 I~EYmEnGDLnqFl~ah  629 (807)
T KOG1094|consen  613 ITEYMENGDLNQFLSAH  629 (807)
T ss_pred             HHHHHhcCcHHHHHHhc
Confidence            99999999999999986

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.52  E-value=4e-14  Score=109.83  Aligned_cols=84  Identities=30%  Similarity=0.497  Sum_probs=74.2

Q ss_pred             ccCCCeEEEEEeccCCceEEEe----------------c---------hhhhHHHHHHHHHhCC-CCCCCceeEEEEeCC
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI----------------K---------KRNRVHIEKEILKMLD-HPFLPSLFAEFEASH  124 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~----------------~---------~~~~~~~E~~~l~~~~-h~~iv~l~~~~~~~~  124 (156)
                      ...+.|.+.+.||+|+||+|+.                +         ..+.+.+|+.+++.++ ||||++++.++....
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            4567899999999999999999                1         1234568999999998 999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCCcC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      .+|+|||||.||+|+++|.+.  +.+.|++||
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~~--g~l~E~~ar  123 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVNK--GRLKEDEAR  123 (370)
T ss_pred             eEEEEEEecCCccHHHHHHHc--CCCChHHHH
Confidence            999999999999999999985  889997764

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.52  E-value=1.3e-14  Score=118.72  Aligned_cols=76  Identities=24%  Similarity=0.388  Sum_probs=70.4

Q ss_pred             CccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS  123 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~  123 (156)
                      .+...+.+..+.||+|+||+||+                          ++.+.|++|++.|..++|||||+|+|++..+
T Consensus       482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~  561 (774)
T KOG1026|consen  482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREG  561 (774)
T ss_pred             EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC
Confidence            45677888899999999999999                          3567899999999999999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHHhc
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +++|+|+||+..|||.++|+.+
T Consensus       562 ~P~~MvFEYm~~GDL~eFLra~  583 (774)
T KOG1026|consen  562 DPLCMVFEYMDHGDLHEFLRAR  583 (774)
T ss_pred             CeeEEEEEecccccHHHHHHhh
Confidence            9999999999999999999975

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.51  E-value=8.6e-14  Score=106.18  Aligned_cols=85  Identities=29%  Similarity=0.493  Sum_probs=73.6

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      ...+..++|.+.+.||+|+||.||+                       +..+.+.+|+.++..++||||+++++.+.+++
T Consensus        12 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   91 (329)
T PTZ00263         12 TSSWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN   91 (329)
T ss_pred             cCCCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC
Confidence            3455678999999999999999998                       12345788999999999999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      .+|++|||+++|+|.+++.+.  +.++++.
T Consensus        92 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~  119 (329)
T PTZ00263         92 RVYFLLEFVVGGELFTHLRKA--GRFPNDV  119 (329)
T ss_pred             EEEEEEcCCCCChHHHHHHHc--CCCCHHH
Confidence            999999999999999999875  6676654

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.50  E-value=7.1e-14  Score=108.42  Aligned_cols=80  Identities=29%  Similarity=0.572  Sum_probs=69.3

Q ss_pred             CCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ++|.+++.||+|+||.||+                       ...+.+.+|+.++..++||||+++++++.+...+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            4689999999999999998                       12345678999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      ||+++|+|.+++...  +.+++..+
T Consensus        81 E~~~gg~L~~~l~~~--~~~~~~~~  103 (377)
T cd05629          81 EFLPGGDLMTMLIKY--DTFSEDVT  103 (377)
T ss_pred             eCCCCCcHHHHHHhc--CCCCHHHH
Confidence            999999999999875  66766543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.50  E-value=9.3e-14  Score=106.64  Aligned_cols=85  Identities=31%  Similarity=0.632  Sum_probs=73.1

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS  123 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~  123 (156)
                      ...+..++|.+.+.||+|+||.||+                        +..+.+.+|+.++..++||||+++++++.+.
T Consensus        24 ~~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~  103 (340)
T PTZ00426         24 KNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE  103 (340)
T ss_pred             CCCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC
Confidence            3456678999999999999999998                        1123467899999999999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      +.+|++|||+++|+|.+++.+.  +.+++..
T Consensus       104 ~~~~lv~Ey~~~g~L~~~i~~~--~~~~~~~  132 (340)
T PTZ00426        104 SYLYLVLEFVIGGEFFTFLRRN--KRFPNDV  132 (340)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHc--CCCCHHH
Confidence            9999999999999999999875  5676654

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.50  E-value=9.5e-14  Score=107.89  Aligned_cols=79  Identities=27%  Similarity=0.473  Sum_probs=69.2

Q ss_pred             CeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           75 QFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      .|.+++.||+|+||.||+                       ...+.+.+|+.++..++|+||+++++.+.+.+.+|+|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            588999999999999999                       123457889999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |+++|+|.+++.+.  +.++|..+
T Consensus        82 ~~~gg~L~~~l~~~--~~~~e~~~  103 (382)
T cd05625          82 YIPGGDMMSLLIRM--GIFPEDLA  103 (382)
T ss_pred             CCCCCcHHHHHHhc--CCCCHHHH
Confidence            99999999999875  56776543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.50  E-value=9.2e-14  Score=107.70  Aligned_cols=79  Identities=25%  Similarity=0.474  Sum_probs=69.2

Q ss_pred             CCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ++|++++.||+|+||.||+            |           ..+.+.+|+.++..++|+||+++++.+.+++.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            3689999999999999998            1           2345778999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ||+++|+|.++|.+.  +.++++.
T Consensus        81 E~~~~g~L~~~i~~~--~~~~~~~  102 (376)
T cd05598          81 DYIPGGDMMSLLIRL--GIFEEDL  102 (376)
T ss_pred             eCCCCCcHHHHHHhc--CCCCHHH
Confidence            999999999999875  6666654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.49  E-value=1.2e-14  Score=113.09  Aligned_cols=81  Identities=28%  Similarity=0.535  Sum_probs=72.2

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe-EEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY-SRLV  129 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~-~~lv  129 (156)
                      .++|.+++++|+|+||.+++                      +..+....|+.++++++|||||.+.+.|..++. ++|+
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv   82 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV   82 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence            57899999999999999988                      334578999999999999999999999998887 9999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCC
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |+||+||+|.+.|.++++..|+|+
T Consensus        83 m~Y~eGg~l~~~i~~~k~~~f~E~  106 (426)
T KOG0589|consen   83 MEYCEGGDLAQLIKEQKGVLFPEE  106 (426)
T ss_pred             EeecCCCCHHHHHHHHhhccccHH
Confidence            999999999999998865667765

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.49  E-value=8.9e-14  Score=107.22  Aligned_cols=80  Identities=30%  Similarity=0.621  Sum_probs=69.5

Q ss_pred             CCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ++|++.+.||+|+||.||+            |           ....+.+|+.++..++||||+++++.+.+.+.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            4789999999999999998            1           1234678999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      ||+++|+|.+++...  +.++|..+
T Consensus        81 E~~~~g~L~~~l~~~--~~l~~~~~  103 (364)
T cd05599          81 EYLPGGDMMTLLMKK--DTFTEEET  103 (364)
T ss_pred             CCCCCcHHHHHHHHc--CCCCHHHH
Confidence            999999999999875  66776543

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.49  E-value=1.1e-13  Score=107.68  Aligned_cols=78  Identities=26%  Similarity=0.474  Sum_probs=68.4

Q ss_pred             CeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           75 QFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      .|++++.||+|+||.||+                       ...+.+.+|+.++..++|+||+++++.+.+.+.+|+|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            588999999999999998                       123357789999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      |++||+|.+++.+.  +.++|..
T Consensus        82 ~~~gg~L~~~l~~~--~~~~e~~  102 (381)
T cd05626          82 YIPGGDMMSLLIRM--EVFPEVL  102 (381)
T ss_pred             cCCCCcHHHHHHhc--CCCCHHH
Confidence            99999999999875  5676654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.48  E-value=1.6e-13  Score=106.07  Aligned_cols=80  Identities=23%  Similarity=0.486  Sum_probs=69.7

Q ss_pred             CCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ++|++.+.||+|+||.||+            |           ....+.+|+.++..++|+||+++++.+.+...+|+||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            4789999999999999998            1           1235678999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      ||++||+|.+++.+.  +.+++..+
T Consensus        81 E~~~gg~L~~~l~~~--~~l~~~~~  103 (363)
T cd05628          81 EFLPGGDMMTLLMKK--DTLTEEET  103 (363)
T ss_pred             cCCCCCcHHHHHHhc--CCCCHHHH
Confidence            999999999999875  66776543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.47  E-value=2.7e-15  Score=125.93  Aligned_cols=85  Identities=26%  Similarity=0.490  Sum_probs=76.6

Q ss_pred             CccCCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      ++..++|.++++||+|+||.|.+            |           ....|..|.+||.-.+.++||+++..|+|+.++
T Consensus        71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~L  150 (1317)
T KOG0612|consen   71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYL  150 (1317)
T ss_pred             hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccce
Confidence            56779999999999999999998            1           123578899999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCCCcC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      |+||||++||||..++.+.  ..++|++||
T Consensus       151 YlVMdY~pGGDlltLlSk~--~~~pE~~Ar  178 (1317)
T KOG0612|consen  151 YLVMDYMPGGDLLTLLSKF--DRLPEDWAR  178 (1317)
T ss_pred             EEEEecccCchHHHHHhhc--CCChHHHHH
Confidence            9999999999999999997  589999886

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.47  E-value=7e-14  Score=105.56  Aligned_cols=82  Identities=26%  Similarity=0.435  Sum_probs=72.8

Q ss_pred             CccCCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC-eEE
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH-YSR  127 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~-~~~  127 (156)
                      .+..++++.++.||+|..|.||+                     ...+.+.+|+++++.++||+||.+||+|..++ .++
T Consensus        75 ~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~is  154 (364)
T KOG0581|consen   75 GISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEIS  154 (364)
T ss_pred             ccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEE
Confidence            45566888899999999999999                     23467899999999999999999999999998 499


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |+||||.+|+|.+++++.  ++++|.
T Consensus       155 I~mEYMDgGSLd~~~k~~--g~i~E~  178 (364)
T KOG0581|consen  155 ICMEYMDGGSLDDILKRV--GRIPEP  178 (364)
T ss_pred             eehhhcCCCCHHHHHhhc--CCCCHH
Confidence            999999999999999986  778774

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.46  E-value=8.5e-15  Score=109.72  Aligned_cols=89  Identities=27%  Similarity=0.479  Sum_probs=79.0

Q ss_pred             hccCCccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe
Q 043174           66 QEHGQVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA  122 (156)
Q Consensus        66 ~~~~~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~  122 (156)
                      ....++.+++|..+++||+|.||+|.+                       ....+-..|-++|...+||++..|...|++
T Consensus       160 ~~~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt  239 (516)
T KOG0690|consen  160 KRKNKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQT  239 (516)
T ss_pred             cccceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhcc
Confidence            445567889999999999999999998                       223456778889999999999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHHHhcCCCCCCCCCcC
Q 043174          123 SHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus       123 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      .+++|+||||+.||+|+.+|.+.  +.|+|+.+|
T Consensus       240 ~drlCFVMeyanGGeLf~HLsre--r~FsE~RtR  271 (516)
T KOG0690|consen  240 QDRLCFVMEYANGGELFFHLSRE--RVFSEDRTR  271 (516)
T ss_pred             CceEEEEEEEccCceEeeehhhh--hcccchhhh
Confidence            99999999999999999999986  889999886

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.46  E-value=1.4e-13  Score=106.33  Aligned_cols=81  Identities=26%  Similarity=0.489  Sum_probs=66.8

Q ss_pred             ccCCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC-eEEE
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH-YSRL  128 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~-~~~l  128 (156)
                      +..+.+.+.+.||.|+||.||+                     +..+.|.+|+.+|.+++|||||+++|++..+. .+++
T Consensus        38 i~~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~i  117 (362)
T KOG0192|consen   38 IDPDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCI  117 (362)
T ss_pred             cChHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEE
Confidence            3345556666799999999998                     11448999999999999999999999998877 7999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFS  151 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~  151 (156)
                      ||||+++|+|..++.....+.++
T Consensus       118 VtEy~~~GsL~~~l~~~~~~~l~  140 (362)
T KOG0192|consen  118 VTEYMPGGSLSVLLHKKRKRKLP  140 (362)
T ss_pred             EEEeCCCCcHHHHHhhcccCCCC
Confidence            99999999999999873234454

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.45  E-value=9.4e-14  Score=113.35  Aligned_cols=87  Identities=20%  Similarity=0.292  Sum_probs=78.9

Q ss_pred             hhccCCccCCCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEE
Q 043174           65 QQEHGQVGLDQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEF  120 (156)
Q Consensus        65 ~~~~~~~~~~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~  120 (156)
                      +.....+...+.++.++||.|.||.||.                        +++..|+.|+.||.+..||||++|-|+.
T Consensus       620 reFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVV  699 (996)
T KOG0196|consen  620 REFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVV  699 (996)
T ss_pred             HHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEE
Confidence            5556677888899999999999999999                        6678899999999999999999999999


Q ss_pred             EeCCeEEEEEeccCCCCHHHHHHhcCCCCCCC
Q 043174          121 EASHYSRLVIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       121 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      ....+++|+.|||++|.|..+|+++ ++.|.-
T Consensus       700 Tks~PvMIiTEyMENGsLDsFLR~~-DGqftv  730 (996)
T KOG0196|consen  700 TKSKPVMIITEYMENGSLDSFLRQN-DGQFTV  730 (996)
T ss_pred             ecCceeEEEhhhhhCCcHHHHHhhc-CCceEe
Confidence            9999999999999999999999988 566653

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.45  E-value=2e-13  Score=106.13  Aligned_cols=81  Identities=33%  Similarity=0.539  Sum_probs=71.5

Q ss_pred             cCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCC-CCCCCceeEEEEeCCeEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLD-HPFLPSLFAEFEASHYSR  127 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~-h~~iv~l~~~~~~~~~~~  127 (156)
                      ....|.+.+.||+|+||.||+                       ...+.+.+|+.||..+. |||||.++++|++...++
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~  112 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY  112 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence            356799999999999999999                       12357899999999998 999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      +|||+|.||+|++.|.+.   .++|.+|
T Consensus       113 lvmEL~~GGeLfd~i~~~---~~sE~da  137 (382)
T KOG0032|consen  113 LVMELCEGGELFDRIVKK---HYSERDA  137 (382)
T ss_pred             EEEEecCCchHHHHHHHc---cCCHHHH
Confidence            999999999999999885   3777654

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.45  E-value=4.9e-13  Score=102.02  Aligned_cols=79  Identities=28%  Similarity=0.492  Sum_probs=68.9

Q ss_pred             CCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ++|++.+.||+|+||.||+                       ...+.+.+|+.++..++||||+++++.+.+.+.+|+||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            4689999999999999998                       12345778999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ||+++|+|.+++...  +.+++..
T Consensus        81 e~~~g~~L~~~l~~~--~~l~~~~  102 (333)
T cd05600          81 EYVPGGDFRTLLNNL--GVLSEDH  102 (333)
T ss_pred             eCCCCCCHHHHHHHc--CCCCHHH
Confidence            999999999999875  5666654

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.44  E-value=1.2e-13  Score=111.12  Aligned_cols=81  Identities=28%  Similarity=0.485  Sum_probs=73.7

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------ch-------hhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------KK-------RNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------~~-------~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      .+-|++.+.||.|+-|.|.+                +.       ...+.+||.||+.+.|||+++++++|++...+|+|
T Consensus        11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv   90 (786)
T KOG0588|consen   11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV   90 (786)
T ss_pred             ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence            46689999999999999998                22       45689999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      .||++||+|++++.++  |.++|.+|
T Consensus        91 lEyv~gGELFdylv~k--G~l~e~ea  114 (786)
T KOG0588|consen   91 LEYVPGGELFDYLVRK--GPLPEREA  114 (786)
T ss_pred             EEecCCchhHHHHHhh--CCCCCHHH
Confidence            9999999999999986  99999876

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.44  E-value=4.7e-13  Score=103.25  Aligned_cols=79  Identities=24%  Similarity=0.510  Sum_probs=68.9

Q ss_pred             CCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ++|++.+.||+|+||.||+                       .....+..|+.++..++|+||+++++.+.+.+.+|+||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            4689999999999999998                       12345678999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ||++||+|.+++.+.  +.+++..
T Consensus        81 E~~~gg~L~~~l~~~--~~l~~~~  102 (360)
T cd05627          81 EFLPGGDMMTLLMKK--DTLSEEA  102 (360)
T ss_pred             eCCCCccHHHHHHhc--CCCCHHH
Confidence            999999999999875  6677654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.43  E-value=8.3e-13  Score=100.80  Aligned_cols=81  Identities=22%  Similarity=0.322  Sum_probs=70.3

Q ss_pred             ccCCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEE
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      +..++|++.+.||+|+||.||+                     ...+.+.+|++++..++||||+++++++.+.+.++++
T Consensus         2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (331)
T cd06649           2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC   81 (331)
T ss_pred             CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            3468899999999999999998                     1124588999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCC
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |||+++|+|.+++...  +.+++.
T Consensus        82 ~e~~~~~~L~~~l~~~--~~~~~~  103 (331)
T cd06649          82 MEHMDGGSLDQVLKEA--KRIPEE  103 (331)
T ss_pred             eecCCCCcHHHHHHHc--CCCCHH
Confidence            9999999999999875  455543

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.43  E-value=1.8e-13  Score=102.62  Aligned_cols=79  Identities=32%  Similarity=0.608  Sum_probs=68.7

Q ss_pred             CCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ++|++.+.||+|+||.||+            |           ..+.+.+|+.+++.++||||+++++.+.+...+|++|
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            4689999999999999998            1           2235778999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ||+++|+|.+++++.  +.+++..
T Consensus        81 e~~~~~~L~~~~~~~--~~~~~~~  102 (291)
T cd05612          81 EYVPGGELFSYLRNS--GRFSNST  102 (291)
T ss_pred             eCCCCCCHHHHHHHc--CCCCHHH
Confidence            999999999999875  5666543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.42  E-value=5.4e-13  Score=101.98  Aligned_cols=80  Identities=24%  Similarity=0.364  Sum_probs=69.5

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------c---------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------K---------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------~---------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ..++|++.+.||+|+||.||+            +         ....+.+|++++..++|+||+++++++.+.+.++++|
T Consensus         3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   82 (333)
T cd06650           3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   82 (333)
T ss_pred             chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence            457899999999999999998            1         1235789999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||+++|+|.+++++.  +.+++.
T Consensus        83 e~~~~~~L~~~l~~~--~~~~~~  103 (333)
T cd06650          83 EHMDGGSLDQVLKKA--GRIPEQ  103 (333)
T ss_pred             ecCCCCcHHHHHHHc--CCCCHH
Confidence            999999999999875  455543

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.42  E-value=6.7e-13  Score=98.11  Aligned_cols=81  Identities=20%  Similarity=0.229  Sum_probs=68.5

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR  127 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~  127 (156)
                      ...+|++.+.||+|+||.||+                        +....+.+|+.++..++||||+++++++...+.++
T Consensus         3 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   82 (266)
T cd05064           3 DNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM   82 (266)
T ss_pred             chHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence            356799999999999999987                        11235788999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +||||+++|+|.+++... .+.+++.
T Consensus        83 lv~e~~~~~~L~~~l~~~-~~~l~~~  107 (266)
T cd05064          83 IVTEYMSNGALDSFLRKH-EGQLVAG  107 (266)
T ss_pred             EEEEeCCCCcHHHHHHhC-CCCCCHH
Confidence            999999999999999874 2345543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.42  E-value=8.7e-13  Score=100.74  Aligned_cols=80  Identities=26%  Similarity=0.459  Sum_probs=68.2

Q ss_pred             CCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ++|++.+.||+|+||.||+            |           ..+.+..|+.++..++|+||+.+++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            4789999999999999998            1           1234678999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ||+++|+|.+++.+. ...++|..
T Consensus        81 e~~~g~~L~~~l~~~-~~~~~~~~  103 (331)
T cd05597          81 DYYVGGDLLTLLSKF-EDRLPEDM  103 (331)
T ss_pred             ecCCCCcHHHHHHHh-cCCCCHHH
Confidence            999999999999764 24566654

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.41  E-value=1.6e-12  Score=100.62  Aligned_cols=84  Identities=26%  Similarity=0.299  Sum_probs=72.6

Q ss_pred             CchhHHHHHHHhhhccCCccCCCeEEEEEeccCCceEEEe------------------ch-hhhHHHHHHHHHhCCCCCC
Q 043174           53 NQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVYI------------------KK-RNRVHIEKEILKMLDHPFL  113 (156)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~------------------~~-~~~~~~E~~~l~~~~h~~i  113 (156)
                      ..+.+.++...         +++|.-...||+|+||.||+                  .. ...|.+|+.++..++|||+
T Consensus        63 ~~fs~~el~~A---------T~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nl  133 (361)
T KOG1187|consen   63 RSFSYDELRKA---------TNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNL  133 (361)
T ss_pred             ceeeHHHHHHH---------HhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCc
Confidence            34556666666         58899889999999999998                  12 4569999999999999999


Q ss_pred             CceeEEEEeCC-eEEEEEeccCCCCHHHHHHhc
Q 043174          114 PSLFAEFEASH-YSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       114 v~l~~~~~~~~-~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      |+|+|+|.+.+ ..+||+||+++|+|.++|...
T Consensus       134 v~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~  166 (361)
T KOG1187|consen  134 VKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGK  166 (361)
T ss_pred             ccEEEEEecCCceEEEEEEccCCCCHHHHhCCC
Confidence            99999999888 599999999999999999765

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.41  E-value=7.4e-13  Score=103.85  Aligned_cols=77  Identities=26%  Similarity=0.322  Sum_probs=67.4

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCC-CCCCCceeEEEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLD-HPFLPSLFAEFE  121 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~-h~~iv~l~~~~~  121 (156)
                      +....+.|.+.+.||+|+||.||+                          ...+.+.+|+.++..+. ||||+++++++.
T Consensus        32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~  111 (400)
T cd05105          32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT  111 (400)
T ss_pred             eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc
Confidence            345577899999999999999985                          11346788999999995 999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhc
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +.+.+|+||||+++|+|.++|.++
T Consensus       112 ~~~~~~lv~Ey~~~g~L~~~l~~~  135 (400)
T cd05105         112 KSGPIYIITEYCFYGDLVNYLHKN  135 (400)
T ss_pred             cCCceEEEEEecCCCcHHHHHHHh
Confidence            999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.40  E-value=1.4e-12  Score=98.55  Aligned_cols=78  Identities=23%  Similarity=0.346  Sum_probs=68.0

Q ss_pred             CCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           74 DQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      ++|++.+.||+|+||.||+                     .....+.+|++++..++||||+++++.+.+++.++++|||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            4689999999999999998                     1123578899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +++|+|.+++++.  +.+++.
T Consensus        81 ~~~~~L~~~l~~~--~~~~~~   99 (308)
T cd06615          81 MDGGSLDQVLKKA--GRIPEN   99 (308)
T ss_pred             cCCCcHHHHHHhc--CCCCHH
Confidence            9999999999875  556554

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.39  E-value=1.1e-12  Score=101.69  Aligned_cols=85  Identities=21%  Similarity=0.428  Sum_probs=71.6

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS  123 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~  123 (156)
                      ....+..++|++.+.||+|+||.||+            |           ....+..|+.++..++||||+++++++.+.
T Consensus        36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~  115 (370)
T cd05596          36 TKLRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDD  115 (370)
T ss_pred             ccCCCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence            34456778999999999999999997            1           112366899999999999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ..+|+||||++||+|.+++..   ..+++..
T Consensus       116 ~~~~lv~Ey~~gg~L~~~l~~---~~l~~~~  143 (370)
T cd05596         116 KYLYMVMEYMPGGDLVNLMSN---YDIPEKW  143 (370)
T ss_pred             CEEEEEEcCCCCCcHHHHHHh---cCCCHHH
Confidence            999999999999999999976   3466543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.39  E-value=1.4e-12  Score=99.56  Aligned_cols=80  Identities=28%  Similarity=0.483  Sum_probs=67.7

Q ss_pred             CCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ++|.+.+.||+|+||.||+            |           ....+..|+.++..++|+||+++++.+.+.+.+|+||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            4789999999999999998            1           1233677889999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ||++||+|.+++.+. .+.+++..
T Consensus        81 Ey~~gg~L~~~l~~~-~~~l~~~~  103 (331)
T cd05624          81 DYYVGGDLLTLLSKF-EDRLPEDM  103 (331)
T ss_pred             eCCCCCcHHHHHHHh-cCCCCHHH
Confidence            999999999999874 24566543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.38  E-value=1.2e-12  Score=101.64  Aligned_cols=83  Identities=24%  Similarity=0.499  Sum_probs=70.5

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      .....++|++.+.||+|+||.||+            |           ..+.+.+|+.++..++||||+++++++.++..
T Consensus        38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~  117 (370)
T cd05621          38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY  117 (370)
T ss_pred             cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence            355668899999999999999997            1           12346789999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      +|+||||+++|+|.+++...   .+++..
T Consensus       118 ~~lv~Ey~~gg~L~~~l~~~---~~~~~~  143 (370)
T cd05621         118 LYMVMEYMPGGDLVNLMSNY---DVPEKW  143 (370)
T ss_pred             EEEEEcCCCCCcHHHHHHhc---CCCHHH
Confidence            99999999999999999763   466543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.38  E-value=6.5e-13  Score=106.63  Aligned_cols=73  Identities=25%  Similarity=0.379  Sum_probs=64.1

Q ss_pred             cCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      ..+.+.+.+.||+|.||.||.                         ...+.|+.|.-+|+.++|||||+|+|++. ..++
T Consensus       387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~-e~P~  465 (974)
T KOG4257|consen  387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV-EQPM  465 (974)
T ss_pred             ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee-ccce
Confidence            334455667899999999999                         34678999999999999999999999886 5779


Q ss_pred             EEEEeccCCCCHHHHHHhc
Q 043174          127 RLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~  145 (156)
                      ++|||+++.|+|..||+.+
T Consensus       466 WivmEL~~~GELr~yLq~n  484 (974)
T KOG4257|consen  466 WIVMELAPLGELREYLQQN  484 (974)
T ss_pred             eEEEecccchhHHHHHHhc
Confidence            9999999999999999986

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.37  E-value=2e-12  Score=100.31  Aligned_cols=84  Identities=23%  Similarity=0.489  Sum_probs=71.2

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCC
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      ...+..++|.+.+.||+|+||.||+            |           ..+.+.+|+.++..++||||+++++.+.++.
T Consensus        37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~  116 (371)
T cd05622          37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR  116 (371)
T ss_pred             hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence            3456678999999999999999998            1           1234668899999999999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      .+|+||||+++|+|.++++.   ..+++..
T Consensus       117 ~~~lv~Ey~~gg~L~~~~~~---~~~~~~~  143 (371)
T cd05622         117 YLYMVMEYMPGGDLVNLMSN---YDVPEKW  143 (371)
T ss_pred             EEEEEEcCCCCCcHHHHHHh---cCCCHHH
Confidence            99999999999999999976   3466543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.37  E-value=7.4e-13  Score=102.90  Aligned_cols=76  Identities=24%  Similarity=0.396  Sum_probs=66.3

Q ss_pred             CccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEe
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEA  122 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~  122 (156)
                      .+..++|.+.+.||+|+||.||+                          ...+.+.+|+.++..+ +||||+++++.+.+
T Consensus        31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~  110 (375)
T cd05104          31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV  110 (375)
T ss_pred             ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence            34456799999999999999985                          1123577899999999 89999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHHHhc
Q 043174          123 SHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       123 ~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      .+..+++|||+++|+|.+++++.
T Consensus       111 ~~~~~lv~E~~~~g~L~~~l~~~  133 (375)
T cd05104         111 GGPTLVITEYCCYGDLLNFLRRK  133 (375)
T ss_pred             CCcceeeehhccCCcHHHHHHhc
Confidence            99999999999999999999874

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.37  E-value=2e-12  Score=98.77  Aligned_cols=77  Identities=21%  Similarity=0.304  Sum_probs=65.1

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe-----------------c---------hhhhHHHHHHHHHhC-CCCCCCceeEEEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI-----------------K---------KRNRVHIEKEILKML-DHPFLPSLFAEFE  121 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~-----------------~---------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~  121 (156)
                      +.+..++|++.+.||+|+||.||+                 |         ....+.+|+.++..+ +||||+++++++.
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   81 (338)
T cd05102           2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACT   81 (338)
T ss_pred             cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEec
Confidence            345667899999999999999986                 1         123578899999999 8999999999877


Q ss_pred             e-CCeEEEEEeccCCCCHHHHHHhc
Q 043174          122 A-SHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       122 ~-~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      . ...++++|||+++|+|.++|...
T Consensus        82 ~~~~~~~lv~ey~~~g~L~~~l~~~  106 (338)
T cd05102          82 KPNGPLMVIVEFCKYGNLSNFLRAK  106 (338)
T ss_pred             CCCCceEEEEecCCCCcHHHHHHhc
Confidence            6 44689999999999999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.37  E-value=1.2e-12  Score=110.54  Aligned_cols=75  Identities=29%  Similarity=0.436  Sum_probs=68.4

Q ss_pred             ccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      +.....++.+.||+|+||.||.                          .....|.+|..+|+.++|||||+++|++.+..
T Consensus       689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~  768 (1025)
T KOG1095|consen  689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG  768 (1025)
T ss_pred             CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC
Confidence            4467788899999999999999                          23457999999999999999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhc
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ..+|++|||+||||..+|++.
T Consensus       769 ~~~i~leyM~gGDL~sflr~~  789 (1025)
T KOG1095|consen  769 PPLILLEYMEGGDLLSFLRES  789 (1025)
T ss_pred             CcEEEehhcccCcHHHHHHhc
Confidence            999999999999999999985

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.37  E-value=2.6e-13  Score=106.10  Aligned_cols=86  Identities=28%  Similarity=0.361  Sum_probs=70.8

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC--
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS--  123 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~--  123 (156)
                      +.....+.|+.+++||+|+||.||+            |          ......+||.||++++||||++|.+...+.  
T Consensus       111 w~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~  190 (560)
T KOG0600|consen  111 WGPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLS  190 (560)
T ss_pred             ccccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCC
Confidence            3445667899999999999999999            1          123468999999999999999999987765  


Q ss_pred             CeEEEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      +.+|+|+||++. ||..++..- .-.|+|.+.
T Consensus       191 ~siYlVFeYMdh-DL~GLl~~p-~vkft~~qI  220 (560)
T KOG0600|consen  191 GSIYLVFEYMDH-DLSGLLSSP-GVKFTEPQI  220 (560)
T ss_pred             ceEEEEEecccc-hhhhhhcCC-CcccChHHH
Confidence            789999999986 999999863 456877654

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.36  E-value=2.6e-12  Score=98.07  Aligned_cols=80  Identities=25%  Similarity=0.459  Sum_probs=67.6

Q ss_pred             CCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ++|.+.+.||+|+||.||+            |           ....+..|+.++..++|+||+.+++.+.+...+|+||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            4789999999999999998            1           1223678899999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ||+++|+|.+++.+. ...+++..
T Consensus        81 ey~~~g~L~~~l~~~-~~~l~~~~  103 (332)
T cd05623          81 DYYVGGDLLTLLSKF-EDRLPEDM  103 (332)
T ss_pred             eccCCCcHHHHHHHh-cCCCCHHH
Confidence            999999999999864 24566543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.36  E-value=3e-13  Score=105.31  Aligned_cols=86  Identities=28%  Similarity=0.441  Sum_probs=69.0

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe----------------------------------chhhhHHHHHHHHHhCCCCC
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI----------------------------------KKRNRVHIEKEILKMLDHPF  112 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~----------------------------------~~~~~~~~E~~~l~~~~h~~  112 (156)
                      ......+++|++++.||+|+||+|.+                                  ..++.+.+||.||++++|||
T Consensus        90 ~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~n  169 (576)
T KOG0585|consen   90 DQDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPN  169 (576)
T ss_pred             cccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcC
Confidence            33456679999999999999999998                                  12357899999999999999


Q ss_pred             CCceeEEEEeC--CeEEEEEeccCCCCHHHHHHhcCCCC-CCCCCc
Q 043174          113 LPSLFAEFEAS--HYSRLVIEYCPGGDLLTVSQRQRRLR-FSIPSA  155 (156)
Q Consensus       113 iv~l~~~~~~~--~~~~lv~E~~~~g~L~~~l~~~~~~~-~~e~~a  155 (156)
                      ||+|+.+.+|+  ..+|||+|||..|.+.+.-..   +. +.|.+|
T Consensus       170 VV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d---~~els~~~A  212 (576)
T KOG0585|consen  170 VVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPD---KPELSEQQA  212 (576)
T ss_pred             eeEEEEeecCcccCceEEEEEeccCCccccCCCC---cccccHHHH
Confidence            99999999985  579999999999986654433   22 555544

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.36  E-value=2.9e-12  Score=97.56  Aligned_cols=80  Identities=29%  Similarity=0.500  Sum_probs=68.5

Q ss_pred             CCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ++|.+.+.||+|+||.||+                       ...+.+..|+.++..++|+||+++++.+.+...+|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            4689999999999999997                       12345778999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ||+++|+|.+++++. .+.++|..
T Consensus        81 e~~~~~~L~~~l~~~-~~~l~~~~  103 (330)
T cd05601          81 EYQPGGDLLSLLNRY-EDQFDEDM  103 (330)
T ss_pred             CCCCCCCHHHHHHHh-cCCCCHHH
Confidence            999999999999875 24566553

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.35  E-value=2.2e-12  Score=98.75  Aligned_cols=79  Identities=30%  Similarity=0.603  Sum_probs=68.9

Q ss_pred             CCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ++|.+.+.||+|+||.||+                       .....+..|+.++..++|+||+++++.+.+.+.+|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            4689999999999999998                       12235778999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ||+++|+|.+++.+.  +.+++..
T Consensus        81 e~~~~~~L~~~l~~~--~~l~~~~  102 (350)
T cd05573          81 EYMPGGDLMNLLIRK--DVFPEET  102 (350)
T ss_pred             cCCCCCCHHHHHHHc--CCCCHHH
Confidence            999999999999875  5666654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.35  E-value=3.2e-12  Score=93.76  Aligned_cols=79  Identities=23%  Similarity=0.348  Sum_probs=67.3

Q ss_pred             CCCeEEEEEeccCCceEEEe-----------c-------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccC
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-----------K-------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCP  134 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-----------~-------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~  134 (156)
                      .++|++.+.||+|+||.||+           +       ....+.+|+.+++.++||||+++++++.....++++|||++
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           3 PSELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            45689999999999999997           1       13467889999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCCCC
Q 043174          135 GGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       135 ~g~L~~~l~~~~~~~~~e  152 (156)
                      +|+|.+++... .+.+++
T Consensus        83 ~~~L~~~~~~~-~~~~~~   99 (256)
T cd05114          83 NGCLLNYLRQR-QGKLSK   99 (256)
T ss_pred             CCcHHHHHHhC-ccCCCH
Confidence            99999999764 234544

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.35  E-value=4e-12  Score=94.95  Aligned_cols=80  Identities=29%  Similarity=0.338  Sum_probs=66.3

Q ss_pred             CeEEEEEeccCCceEEEe------------ch-----------hhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           75 QFQLFRRLGSGIIRSVYI------------KK-----------RNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~------------~~-----------~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      .|++.+.||+|+||.||+            +.           ...+.+|+.+++.++||||+.+++.+.+++.++++||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            478899999999999999            11           1235679999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      |+++|+|..++.......+++..
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~  103 (285)
T cd05605          81 LMNGGDLKFHIYNMGNPGFDEER  103 (285)
T ss_pred             ccCCCcHHHHHHhcCcCCCCHHH
Confidence            99999999988764234466543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.34  E-value=8.5e-14  Score=108.18  Aligned_cols=82  Identities=24%  Similarity=0.369  Sum_probs=70.0

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------c-hh--------hhHHHHHHHHHhCC-CCCCCceeEEEEeCC-eEEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------K-KR--------NRVHIEKEILKMLD-HPFLPSLFAEFEASH-YSRL  128 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------~-~~--------~~~~~E~~~l~~~~-h~~iv~l~~~~~~~~-~~~l  128 (156)
                      ..+.|.+++.||.|+||.||+            | +.        -.-.||+..|++++ |||||+|++++.+.+ .+|+
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f   87 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF   87 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence            356788999999999999999            1 11        12478999999998 999999999999987 9999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      ||||++. .|+++++.+ .+.|+|+.+
T Consensus        88 VfE~Md~-NLYqLmK~R-~r~fse~~i  112 (538)
T KOG0661|consen   88 VFEFMDC-NLYQLMKDR-NRLFSESDI  112 (538)
T ss_pred             eHHhhhh-hHHHHHhhc-CCcCCHHHH
Confidence            9999985 999999988 788988764

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.33  E-value=7.2e-12  Score=94.27  Aligned_cols=74  Identities=23%  Similarity=0.294  Sum_probs=65.0

Q ss_pred             cCCCeEEEEEeccCCceEEEe-------------------------------------chhhhHHHHHHHHHhCCCCCCC
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI-------------------------------------KKRNRVHIEKEILKMLDHPFLP  114 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~-------------------------------------~~~~~~~~E~~~l~~~~h~~iv  114 (156)
                      ..++|.+.+.||+|+||.||+                                     .....+.+|+.++..++||||+
T Consensus         3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv   82 (304)
T cd05096           3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNII   82 (304)
T ss_pred             chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCee
Confidence            456799999999999999985                                     0123578899999999999999


Q ss_pred             ceeEEEEeCCeEEEEEeccCCCCHHHHHHhc
Q 043174          115 SLFAEFEASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       115 ~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ++++++.+.+.++++|||+++|+|.+++...
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  113 (304)
T cd05096          83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSH  113 (304)
T ss_pred             EEEEEEecCCceEEEEecCCCCcHHHHHHhc
Confidence            9999999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.33  E-value=4e-12  Score=96.77  Aligned_cols=73  Identities=29%  Similarity=0.464  Sum_probs=62.3

Q ss_pred             EEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCC
Q 043174           80 RRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGG  136 (156)
Q Consensus        80 ~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g  136 (156)
                      +.||+|+||.||+            |           ....+.+|+.++..++||||+++++.+...+.+|+||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            3689999999998            1           1234567999999999999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCCCCCC
Q 043174          137 DLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       137 ~L~~~l~~~~~~~~~e~~  154 (156)
                      +|..++.+.  +.+++..
T Consensus        81 ~L~~~l~~~--~~~~~~~   96 (323)
T cd05595          81 ELFFHLSRE--RVFTEER   96 (323)
T ss_pred             cHHHHHHHc--CCCCHHH
Confidence            999999875  5676654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.32  E-value=4.6e-12  Score=96.41  Aligned_cols=73  Identities=30%  Similarity=0.468  Sum_probs=62.6

Q ss_pred             EEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCC
Q 043174           80 RRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGG  136 (156)
Q Consensus        80 ~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g  136 (156)
                      +.||+|+||.||+            |           ....+.+|+.++..++||||+++++.+...+.+|+||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            3689999999997            1           1235678999999999999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCCCCCC
Q 043174          137 DLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       137 ~L~~~l~~~~~~~~~e~~  154 (156)
                      +|.+++.+.  +.++|..
T Consensus        81 ~L~~~l~~~--~~~~~~~   96 (323)
T cd05571          81 ELFFHLSRE--RVFSEDR   96 (323)
T ss_pred             cHHHHHHHc--CCCCHHH
Confidence            999999875  6676654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.32  E-value=6.3e-13  Score=100.25  Aligned_cols=88  Identities=32%  Similarity=0.517  Sum_probs=79.5

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEe
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEA  122 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~  122 (156)
                      ..+.+.+++|.++++||+|+|.+|.+                       +.+.+.+.|..++.+. +||++|.|+.+|++
T Consensus       243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqt  322 (593)
T KOG0695|consen  243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT  322 (593)
T ss_pred             cccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcc
Confidence            44567889999999999999999887                       3456788899999887 79999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHHHhcCCCCCCCCCcC
Q 043174          123 SHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus       123 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      +..+++|.||++||+|..+++++  +.++|++||
T Consensus       323 esrlffvieyv~ggdlmfhmqrq--rklpeehar  354 (593)
T KOG0695|consen  323 ESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHAR  354 (593)
T ss_pred             cceEEEEEEEecCcceeeehhhh--hcCcHHHhh
Confidence            99999999999999999999997  889999987

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.32  E-value=6.4e-12  Score=92.32  Aligned_cols=82  Identities=21%  Similarity=0.347  Sum_probs=70.1

Q ss_pred             CccCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      .+..++|++.+.||+|+||.||+                  ...+.+.+|+.++..++|+||+++++.+.+.+..+++||
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (261)
T cd05072           2 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITE   81 (261)
T ss_pred             cCchHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEe
Confidence            35568899999999999999998                  123467889999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFS  151 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~  151 (156)
                      |+++|+|.++++......++
T Consensus        82 ~~~~~~L~~~l~~~~~~~~~  101 (261)
T cd05072          82 YMAKGSLLDFLKSDEGGKVL  101 (261)
T ss_pred             cCCCCcHHHHHHHhcCCCCC
Confidence            99999999999765333344

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.32  E-value=7.4e-12  Score=95.42  Aligned_cols=78  Identities=27%  Similarity=0.564  Sum_probs=66.4

Q ss_pred             CeEEEEEeccCCceEEEe---------------c------------hhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeE
Q 043174           75 QFQLFRRLGSGIIRSVYI---------------K------------KRNRVHIEKEILKML-DHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~---------------~------------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~  126 (156)
                      +|++.+.||+|+||.||+               |            ..+.+..|+.++..+ +|+||+++++++...+.+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            488999999999999996               1            123467799999999 599999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      +++|||+++|+|.+++.++  +.++++.
T Consensus        81 ~lv~e~~~~g~L~~~l~~~--~~~~~~~  106 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQR--DNFSEDE  106 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHc--CCCCHHH
Confidence            9999999999999999875  5676654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.32  E-value=2.9e-12  Score=100.55  Aligned_cols=77  Identities=26%  Similarity=0.355  Sum_probs=67.0

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCC-CCCCCceeEEEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLD-HPFLPSLFAEFE  121 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~-h~~iv~l~~~~~  121 (156)
                      +.+..++|.+.+.||+|+||.||+                          ...+.+.+|+.++..+. ||||+++++.+.
T Consensus        32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~  111 (401)
T cd05107          32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT  111 (401)
T ss_pred             ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence            455667789999999999999995                          11235778999999997 999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhc
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ....+++||||+++|+|.++|.+.
T Consensus       112 ~~~~~~iv~E~~~~g~L~~~l~~~  135 (401)
T cd05107         112 KGGPIYIITEYCRYGDLVDYLHRN  135 (401)
T ss_pred             cCCCcEEEEeccCCCcHHHHHHhc
Confidence            999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.31  E-value=1.9e-12  Score=97.95  Aligned_cols=82  Identities=26%  Similarity=0.448  Sum_probs=68.7

Q ss_pred             CCCeEEEEEeccCCceEEEe------------ch--------hhhHHHHHHHHHhCCCCCCCceeEEEEeCC--eEEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------KK--------RNRVHIEKEILKMLDHPFLPSLFAEFEASH--YSRLVI  130 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~~--------~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~--~~~lv~  130 (156)
                      ..++...+.||+|+||.||+            |.        .+.+.+|+.+|..++|||||+++|......  .++++|
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m   95 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM   95 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence            35577888999999999999            11        345799999999999999999999755544  699999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      ||+++|+|.+++++.. +.|+|+.+
T Consensus        96 Ey~~~GsL~~~~~~~g-~~l~E~~v  119 (313)
T KOG0198|consen   96 EYAPGGSLSDLIKRYG-GKLPEPLV  119 (313)
T ss_pred             eccCCCcHHHHHHHcC-CCCCHHHH
Confidence            9999999999999972 27888765

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.31  E-value=5e-12  Score=95.87  Aligned_cols=73  Identities=29%  Similarity=0.610  Sum_probs=61.8

Q ss_pred             EEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccC
Q 043174           80 RRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCP  134 (156)
Q Consensus        80 ~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~  134 (156)
                      +.||+|+||.||+                         .....+..|+.++..++||||+++++.+.+.+.+|+||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5799999999995                         112345679999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCCCCCC
Q 043174          135 GGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       135 ~g~L~~~l~~~~~~~~~e~~  154 (156)
                      +|+|.+++.+.  ..++++.
T Consensus        82 ~~~L~~~l~~~--~~l~~~~   99 (318)
T cd05582          82 GGDLFTRLSKE--VMFTEED   99 (318)
T ss_pred             CCcHHHHHHHc--CCCCHHH
Confidence            99999999775  5566543

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.31  E-value=1.1e-11  Score=92.64  Aligned_cols=79  Identities=28%  Similarity=0.317  Sum_probs=65.3

Q ss_pred             CeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           75 QFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      .|++.+.||+|+||.||+            |           ....+.+|+.++..++|+||+.+++.+.+.+.++++||
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            378899999999999998            1           11246789999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |+++|+|..++.......+++.
T Consensus        81 ~~~~g~L~~~~~~~~~~~~~~~  102 (285)
T cd05631          81 IMNGGDLKFHIYNMGNPGFDEQ  102 (285)
T ss_pred             ecCCCcHHHHHHhhCCCCCCHH
Confidence            9999999988875422345543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.31  E-value=1.7e-11  Score=89.82  Aligned_cols=79  Identities=28%  Similarity=0.471  Sum_probs=67.4

Q ss_pred             CeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           75 QFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      +|++.+.||+|+||.||+                     ...+.+..|+.+++.++|+||+++++.+.+.+.+|++|||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            478899999999999998                     12345778999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCCCC
Q 043174          134 PGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++|+|.+++.......++++
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~  100 (255)
T cd08219          81 DGGDLMQKIKLQRGKLFPED  100 (255)
T ss_pred             CCCcHHHHHHhccCCCCCHH
Confidence            99999999976533445554

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.31  E-value=1.4e-11  Score=92.05  Aligned_cols=78  Identities=37%  Similarity=0.706  Sum_probs=68.1

Q ss_pred             CCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ++|.+.+.||+|+||.||+                       +....+.+|+++++.++||||+++++.+.+...++++|
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            4689999999999999997                       12345778999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||+++|+|.++++..  +.+++.
T Consensus        81 e~~~~~~L~~~~~~~--~~l~~~  101 (290)
T cd05580          81 EYVPGGELFSHLRKS--GRFPEP  101 (290)
T ss_pred             ecCCCCCHHHHHHHc--CCCCHH
Confidence            999999999999875  556654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.30  E-value=1.2e-11  Score=90.46  Aligned_cols=79  Identities=27%  Similarity=0.408  Sum_probs=67.0

Q ss_pred             CeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           75 QFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      +|+..+.||+|+||.||.                      .....+.+|+++++.++|+||+++++++.+.+.++++|||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            488999999999998877                      1234578999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +++|+|.+++.+.....+++.
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~  101 (256)
T cd08221          81 ANGGTLYDKIVRQKGQLFEEE  101 (256)
T ss_pred             cCCCcHHHHHHhccccCCCHH
Confidence            999999999987533345443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.30  E-value=2.5e-12  Score=103.46  Aligned_cols=78  Identities=19%  Similarity=0.255  Sum_probs=69.1

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      .|.+...++.+..+||-|+||.||.                   ..++.|..|+.+|+.++|||+|+|+|+|.-+.++||
T Consensus       261 kWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYI  340 (1157)
T KOG4278|consen  261 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYI  340 (1157)
T ss_pred             hhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEE
Confidence            3444556677788999999999998                   235689999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhc
Q 043174          129 VIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~  145 (156)
                      +.|||..|+|.+||++.
T Consensus       341 iTEfM~yGNLLdYLRec  357 (1157)
T KOG4278|consen  341 ITEFMCYGNLLDYLREC  357 (1157)
T ss_pred             EEecccCccHHHHHHHh
Confidence            99999999999999975

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.30  E-value=3.6e-12  Score=99.05  Aligned_cols=77  Identities=27%  Similarity=0.384  Sum_probs=66.9

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe-----------------c---------hhhhHHHHHHHHHhC-CCCCCCceeEEEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI-----------------K---------KRNRVHIEKEILKML-DHPFLPSLFAEFE  121 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~-----------------~---------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~  121 (156)
                      +.+..++|++.+.||+|+||.||+                 |         ..+.+.+|+.+++.+ +|+||+++++.+.
T Consensus        33 ~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~  112 (374)
T cd05106          33 WEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACT  112 (374)
T ss_pred             ccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence            345567899999999999999985                 1         123578899999999 8999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhc
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ..+.++++|||+++|+|.++++..
T Consensus       113 ~~~~~~lv~ey~~~g~L~~~l~~~  136 (374)
T cd05106         113 HGGPVLVITEYCCYGDLLNFLRKK  136 (374)
T ss_pred             CCCCeEEeHhhccCCcHHHHHHhh
Confidence            999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.30  E-value=7.7e-12  Score=92.33  Aligned_cols=73  Identities=23%  Similarity=0.313  Sum_probs=64.9

Q ss_pred             CCCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      .++|++.+.||+|+||.||+                        +..+.+.+|+.++..++||||+++++++...+.+++
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   82 (267)
T cd05066           3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI   82 (267)
T ss_pred             HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            46789999999999999986                        123467889999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhc
Q 043174          129 VIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~  145 (156)
                      +|||+++|+|.+++...
T Consensus        83 v~e~~~~~~L~~~~~~~   99 (267)
T cd05066          83 VTEYMENGSLDAFLRKH   99 (267)
T ss_pred             EEEcCCCCCHHHHHHhc
Confidence            99999999999999865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.30  E-value=6e-12  Score=95.77  Aligned_cols=73  Identities=29%  Similarity=0.502  Sum_probs=61.8

Q ss_pred             EEeccCCceEEEe---------------c------------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           80 RRLGSGIIRSVYI---------------K------------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        80 ~~lG~G~~g~V~~---------------~------------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      +.||+|+||.||+               |            ....+..|+.++..++||||+++++.+..++.+|++|||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            5799999999997               1            112456799999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      +++|+|.+++.+.  +.+.++.
T Consensus        82 ~~~~~L~~~~~~~--~~~~~~~  101 (323)
T cd05584          82 LSGGELFMHLERE--GIFMEDT  101 (323)
T ss_pred             CCCchHHHHHHHc--CCCCHHH
Confidence            9999999999875  5566543

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.29  E-value=6.7e-12  Score=95.01  Aligned_cols=71  Identities=27%  Similarity=0.475  Sum_probs=61.2

Q ss_pred             eccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCH
Q 043174           82 LGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDL  138 (156)
Q Consensus        82 lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L  138 (156)
                      ||+|+||.||+            |           ....+.+|+.++..++||||+++++.+.+.+.+|++|||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            69999999998            1           123467899999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCCCC
Q 043174          139 LTVSQRQRRLRFSIPS  154 (156)
Q Consensus       139 ~~~l~~~~~~~~~e~~  154 (156)
                      .+++.+.  +.+++..
T Consensus        81 ~~~l~~~--~~~~~~~   94 (312)
T cd05585          81 FHHLQRE--GRFDLSR   94 (312)
T ss_pred             HHHHHhc--CCCCHHH
Confidence            9999875  6676654

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.29  E-value=1.1e-11  Score=91.32  Aligned_cols=79  Identities=22%  Similarity=0.288  Sum_probs=67.5

Q ss_pred             CCCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      .++|++.+.||+|+||.||+                        .....+.+|+.++..++||||+++++.+...+..++
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i   82 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI   82 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence            46799999999999999996                        122457789999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      +|||+++|+|.+++... .+.+++
T Consensus        83 v~e~~~~~~L~~~~~~~-~~~~~~  105 (266)
T cd05033          83 ITEYMENGSLDKFLREN-DGKFTV  105 (266)
T ss_pred             EEEcCCCCCHHHHHHhc-cCCCCH
Confidence            99999999999999765 234544

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.29  E-value=9.6e-12  Score=94.92  Aligned_cols=74  Identities=32%  Similarity=0.525  Sum_probs=62.3

Q ss_pred             EEeccCCceEEEe-----------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           80 RRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        80 ~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      ++||+|+||.||+                       .....+..|+.++..+ +||||+++++++.+...+|++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            3689999999998                       1123467888999888 799999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCCCCCCc
Q 043174          136 GDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       136 g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |+|..++.+.  +.+++..+
T Consensus        81 g~L~~~~~~~--~~l~~~~~   98 (329)
T cd05588          81 GDLMFHMQRQ--RKLPEEHA   98 (329)
T ss_pred             CCHHHHHHHc--CCCCHHHH
Confidence            9999999875  66776543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.29  E-value=1.6e-11  Score=92.47  Aligned_cols=76  Identities=26%  Similarity=0.409  Sum_probs=66.5

Q ss_pred             CccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCe
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHY  125 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~  125 (156)
                      .+..++|.+.+.||+|+||.||+                       .....+.+|+.++..+ +|+||+++++++.+.+.
T Consensus         3 ~~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~   82 (303)
T cd05088           3 VLEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY   82 (303)
T ss_pred             ccchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCC
Confidence            35568899999999999999999                       0123467799999999 89999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhc
Q 043174          126 SRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +|++|||+++|+|.+++.+.
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~  102 (303)
T cd05088          83 LYLAIEYAPHGNLLDFLRKS  102 (303)
T ss_pred             ceEEEEeCCCCcHHHHHHhc
Confidence            99999999999999999864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.28  E-value=1.2e-11  Score=94.47  Aligned_cols=73  Identities=32%  Similarity=0.468  Sum_probs=62.3

Q ss_pred             EEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCC
Q 043174           80 RRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGG  136 (156)
Q Consensus        80 ~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g  136 (156)
                      +.||+|+||.||+                       .....+.+|+.++..++||||+++++.+.+.+.+|+||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            3689999999998                       12235678999999999999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCCCCCC
Q 043174          137 DLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       137 ~L~~~l~~~~~~~~~e~~  154 (156)
                      +|..++...  +.+++..
T Consensus        81 ~L~~~l~~~--~~l~~~~   96 (328)
T cd05593          81 ELFFHLSRE--RVFSEDR   96 (328)
T ss_pred             CHHHHHHhc--CCCCHHH
Confidence            999999875  5666543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.28  E-value=1.2e-11  Score=94.22  Aligned_cols=73  Identities=29%  Similarity=0.455  Sum_probs=61.9

Q ss_pred             EEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCC
Q 043174           80 RRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGG  136 (156)
Q Consensus        80 ~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g  136 (156)
                      +.||+|+||.||+                       .....+..|+.++..++||||+++++.+.+.+.+|+||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            3689999999997                       11234577889999999999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCCCCCC
Q 043174          137 DLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       137 ~L~~~l~~~~~~~~~e~~  154 (156)
                      +|..++.+.  +.++++.
T Consensus        81 ~L~~~l~~~--~~l~~~~   96 (325)
T cd05594          81 ELFFHLSRE--RVFSEDR   96 (325)
T ss_pred             cHHHHHHhc--CCCCHHH
Confidence            999999875  5666654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.28  E-value=2.9e-11  Score=96.82  Aligned_cols=72  Identities=21%  Similarity=0.321  Sum_probs=63.8

Q ss_pred             CCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           73 LDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      ...|.+.+.||+|+||.||+                     .....+.+|+.++..++||||+++++.+.+.+.+|+|||
T Consensus        66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E  145 (478)
T PTZ00267         66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME  145 (478)
T ss_pred             ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence            34499999999999999998                     112357789999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHh
Q 043174          132 YCPGGDLLTVSQR  144 (156)
Q Consensus       132 ~~~~g~L~~~l~~  144 (156)
                      |+++|+|.++|++
T Consensus       146 ~~~gg~L~~~l~~  158 (478)
T PTZ00267        146 YGSGGDLNKQIKQ  158 (478)
T ss_pred             CCCCCCHHHHHHH
Confidence            9999999998864

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.27  E-value=3e-11  Score=93.65  Aligned_cols=87  Identities=17%  Similarity=0.332  Sum_probs=75.5

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      ..+....++|++..+||.|.-+.||+                     .....+++|+..|+.++||||+.++..|..+..
T Consensus        19 ~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~   98 (516)
T KOG0582|consen   19 KEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSE   98 (516)
T ss_pred             ccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecce
Confidence            33456678999999999999999999                     235678999999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +|+||.|+.+|++.++|+..-...|+|.
T Consensus        99 LWvVmpfMa~GS~ldIik~~~~~Gl~E~  126 (516)
T KOG0582|consen   99 LWVVMPFMAGGSLLDIIKTYYPDGLEEA  126 (516)
T ss_pred             eEEeehhhcCCcHHHHHHHHccccccHH
Confidence            9999999999999999998644456553

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.27  E-value=1.4e-11  Score=90.81  Aligned_cols=80  Identities=23%  Similarity=0.360  Sum_probs=68.5

Q ss_pred             cCCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      ..++|++.+.||+|+||.||+                    .....+.+|+.++..++||||+++++.+...+.++++||
T Consensus         7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e   86 (267)
T cd06646           7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICME   86 (267)
T ss_pred             chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Confidence            346799999999999999998                    123357789999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |+++|+|.+++.+.  +.+++.
T Consensus        87 ~~~~~~L~~~~~~~--~~~~~~  106 (267)
T cd06646          87 YCGGGSLQDIYHVT--GPLSEL  106 (267)
T ss_pred             CCCCCcHHHHHHhc--CCCCHH
Confidence            99999999999764  555544

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.27  E-value=4.2e-12  Score=94.62  Aligned_cols=80  Identities=18%  Similarity=0.288  Sum_probs=68.4

Q ss_pred             cCCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ..++|++.+.||+|+||.||+                     +....+.+|++++..++||||+++++.+.+...++++|
T Consensus         3 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (284)
T cd06620           3 RNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM   82 (284)
T ss_pred             cHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence            346788899999999999998                     12346788999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||+++|+|..++.+.  +.+++.
T Consensus        83 e~~~~~~L~~~~~~~--~~~~~~  103 (284)
T cd06620          83 EFMDCGSLDRIYKKG--GPIPVE  103 (284)
T ss_pred             ecCCCCCHHHHHHhc--cCCCHH
Confidence            999999999998874  455543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.27  E-value=2.2e-12  Score=101.81  Aligned_cols=82  Identities=21%  Similarity=0.348  Sum_probs=71.9

Q ss_pred             CCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           74 DQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      +-|.+.+.||+|.|..|.+                      -...++..|+.+|+.++|||||+||.+.++...+|+++|
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE   97 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE   97 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence            4578889999999998877                      123468999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCCCcC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      +-.+|||++||-++ ...++|+.||
T Consensus        98 LGD~GDl~DyImKH-e~Gl~E~La~  121 (864)
T KOG4717|consen   98 LGDGGDLFDYIMKH-EEGLNEDLAK  121 (864)
T ss_pred             ecCCchHHHHHHhh-hccccHHHHH
Confidence            99999999999887 4668888764

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.27  E-value=2.3e-11  Score=91.67  Aligned_cols=78  Identities=27%  Similarity=0.578  Sum_probs=67.6

Q ss_pred             CCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ++|++.+.||+|+||.||+                       +....+.+|+.+++.++||||+++++.+...+.++++|
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            4689999999999999997                       12345678999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||++||+|.++++..  +.+++.
T Consensus        81 e~~~g~~L~~~l~~~--~~~~~~  101 (305)
T cd05609          81 EYVEGGDCATLLKNI--GALPVD  101 (305)
T ss_pred             ecCCCCcHHHHHHHc--CCCCHH
Confidence            999999999999875  556654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.26  E-value=3.5e-11  Score=102.40  Aligned_cols=77  Identities=21%  Similarity=0.555  Sum_probs=66.3

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe--C
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA--S  123 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~--~  123 (156)
                      .+....++|.+++.||+|+||.||+                      .....+..|+.++..+.|||||+++++|.+  .
T Consensus         7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~   86 (1021)
T PTZ00266          7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKAN   86 (1021)
T ss_pred             CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCC
Confidence            3455678999999999999999998                      123457889999999999999999998855  4


Q ss_pred             CeEEEEEeccCCCCHHHHHHh
Q 043174          124 HYSRLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~  144 (156)
                      ..+||||||+++|+|.++|..
T Consensus        87 ~~lyIVMEY~~gGSL~~lL~k  107 (1021)
T PTZ00266         87 QKLYILMEFCDAGDLSRNIQK  107 (1021)
T ss_pred             CEEEEEEeCCCCCcHHHHHHH
Confidence            579999999999999999975

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.26  E-value=2.1e-11  Score=91.18  Aligned_cols=73  Identities=25%  Similarity=0.328  Sum_probs=63.9

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------c---------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------K---------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------~---------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      .+++|.+.+.||+|+||.||+            |         ....+.+|+.++..++||||+++++++.+...++++|
T Consensus         3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~   82 (288)
T cd07871           3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF   82 (288)
T ss_pred             ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence            357899999999999999998            1         1235678999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhc
Q 043174          131 EYCPGGDLLTVSQRQ  145 (156)
Q Consensus       131 E~~~~g~L~~~l~~~  145 (156)
                      ||+++ +|.+++...
T Consensus        83 e~~~~-~l~~~l~~~   96 (288)
T cd07871          83 EYLDS-DLKQYLDNC   96 (288)
T ss_pred             eCCCc-CHHHHHHhc
Confidence            99984 999998764

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.26  E-value=2.2e-11  Score=90.65  Aligned_cols=75  Identities=19%  Similarity=0.330  Sum_probs=65.7

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      +..++|++.+.||+|+||.||+                         .....+.+|+.+++.++||||+++++.+.....
T Consensus         2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~   81 (283)
T cd05090           2 LPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQP   81 (283)
T ss_pred             CChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCc
Confidence            3457899999999999999997                         112357889999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhc
Q 043174          126 SRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~  145 (156)
                      .|++|||+++|+|.+++...
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~  101 (283)
T cd05090          82 VCMLFEYLNQGDLHEFLIMR  101 (283)
T ss_pred             eEEEEEcCCCCcHHHHHHhc
Confidence            99999999999999999653

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.26  E-value=2.7e-11  Score=91.15  Aligned_cols=80  Identities=24%  Similarity=0.282  Sum_probs=66.6

Q ss_pred             CCCeEEEEEeccCCceEEEe------------ch---------hhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------KK---------RNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~~---------~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      .++|++.+.||+|+||.||+            |.         ...+.+|+.+++.++||||+++++++.++..+++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            47799999999999999998            11         1246789999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      |++ ++|.+++..+ .+.++++.
T Consensus        84 ~~~-~~l~~~~~~~-~~~~~~~~  104 (303)
T cd07869          84 YVH-TDLCQYMDKH-PGGLHPEN  104 (303)
T ss_pred             CCC-cCHHHHHHhC-CCCCCHHH
Confidence            996 6898888765 24455543

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.26  E-value=1.4e-11  Score=91.17  Aligned_cols=73  Identities=19%  Similarity=0.323  Sum_probs=65.3

Q ss_pred             CCCeEEEEEeccCCceEEEe-------------------------c-hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-------------------------K-KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-------------------------~-~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      .++|.+++.||+|+||.||+                         . ..+.+.+|+.++..++|+||+++++++.+....
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   83 (275)
T cd05046           4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH   83 (275)
T ss_pred             hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc
Confidence            46789999999999999997                         0 234688899999999999999999999998999


Q ss_pred             EEEEeccCCCCHHHHHHhc
Q 043174          127 RLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~  145 (156)
                      +++|||+++|+|.+++...
T Consensus        84 ~lv~e~~~~~~L~~~i~~~  102 (275)
T cd05046          84 YMILEYTDLGDLKQFLRAT  102 (275)
T ss_pred             eEEEEecCCCcHHHHHHhc
Confidence            9999999999999999875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.26  E-value=1.4e-11  Score=91.82  Aligned_cols=79  Identities=18%  Similarity=0.213  Sum_probs=64.2

Q ss_pred             CCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           74 DQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      ++|++.+.||+|+||.||+                      ...+.+.+|+.++..++||||+++++++...+.+++|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            4689999999999999998                      113457789999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      |++++.+..+.+..  ..++++.
T Consensus        81 ~~~~~~l~~~~~~~--~~~~~~~  101 (287)
T cd07848          81 YVEKNMLELLEEMP--NGVPPEK  101 (287)
T ss_pred             cCCCCHHHHHHhcC--CCCCHHH
Confidence            99987665554432  4565543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.25  E-value=2.2e-11  Score=92.62  Aligned_cols=76  Identities=34%  Similarity=0.549  Sum_probs=61.7

Q ss_pred             eEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHH---hCCCCCCCceeEEEEeCCeEEEE
Q 043174           76 FQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILK---MLDHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~---~~~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      |.+.+.||+|+||.||+                       ...+.+.+|+.++.   .++||||+++++++.+.+.+|+|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            67889999999999998                       11234566766654   56799999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      |||+++|+|..++..   +.+++..
T Consensus        81 ~E~~~~~~L~~~~~~---~~l~~~~  102 (324)
T cd05589          81 MEYAAGGDLMMHIHT---DVFSEPR  102 (324)
T ss_pred             EcCCCCCcHHHHhhc---CCCCHHH
Confidence            999999999998865   4566543

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.25  E-value=1.8e-11  Score=89.97  Aligned_cols=80  Identities=23%  Similarity=0.328  Sum_probs=67.6

Q ss_pred             CCCeEEEEEeccCCceEEEe-----------c-------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccC
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-----------K-------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCP  134 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-----------~-------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~  134 (156)
                      .++|.+.+.||+|+||.||.           +       ....+.+|+.++..++||||+++++++.....++++|||++
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             hHHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            46789999999999999998           1       12357889999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCCCCC
Q 043174          135 GGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       135 ~g~L~~~l~~~~~~~~~e~  153 (156)
                      +|+|.+++.... ..+++.
T Consensus        83 ~~~l~~~i~~~~-~~~~~~  100 (256)
T cd05113          83 NGCLLNYLREHG-KRFQPS  100 (256)
T ss_pred             CCcHHHHHHhcC-CCCCHH
Confidence            999999998642 345543

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.25  E-value=2.3e-11  Score=89.32  Aligned_cols=78  Identities=22%  Similarity=0.365  Sum_probs=67.6

Q ss_pred             CCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      ++|.+.+.||+|+||.||.                         ...+.+.+|+.+++.++||||+++++++.+...+++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            5689999999999999998                         123457889999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++||+++++|.+++...  +.+++.
T Consensus        82 v~e~~~~~~l~~~~~~~--~~~~~~  104 (263)
T cd06625          82 FMEYMPGGSVKDQLKAY--GALTET  104 (263)
T ss_pred             EEEECCCCcHHHHHHHh--CCCCHH
Confidence            99999999999999875  455544

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.25  E-value=2.1e-11  Score=89.75  Aligned_cols=77  Identities=22%  Similarity=0.387  Sum_probs=66.4

Q ss_pred             CeEEEEEeccCCceEEEe-----------c--------------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEE
Q 043174           75 QFQLFRRLGSGIIRSVYI-----------K--------------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~-----------~--------------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      +|++.+.||.|+||.||+           |              ....+.+|+.+++.++|+||+++++++.+.+.++++
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            467888999999999998           1              124578899999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCC
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +||+++|+|.+++.+.  +.++++
T Consensus        81 ~e~~~~~~L~~~l~~~--~~~~~~  102 (265)
T cd06631          81 MEFVPGGSISSILNRF--GPLPEP  102 (265)
T ss_pred             EecCCCCcHHHHHHhc--CCCCHH
Confidence            9999999999999875  556554

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.25  E-value=3.8e-11  Score=88.28  Aligned_cols=75  Identities=21%  Similarity=0.361  Sum_probs=65.8

Q ss_pred             CccCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      .+..+.|.+.+.||+|+||.||+                  ...+.+.+|+.+++.++|+||+++++.+.. ...+++||
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e   80 (260)
T cd05073           2 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITE   80 (260)
T ss_pred             cccccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEE
Confidence            35578899999999999999997                  123467889999999999999999998887 77899999


Q ss_pred             ccCCCCHHHHHHhc
Q 043174          132 YCPGGDLLTVSQRQ  145 (156)
Q Consensus       132 ~~~~g~L~~~l~~~  145 (156)
                      |+++|+|.+++++.
T Consensus        81 ~~~~~~L~~~~~~~   94 (260)
T cd05073          81 FMAKGSLLDFLKSD   94 (260)
T ss_pred             eCCCCcHHHHHHhC
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.25  E-value=2.7e-11  Score=90.45  Aligned_cols=75  Identities=24%  Similarity=0.329  Sum_probs=65.4

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-----------------c---------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCC
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-----------------K---------KRNRVHIEKEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-----------------~---------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      +..++|.+.+.||+|+||.||+                 |         ....+.+|+.++..++|+||+++++.+.+..
T Consensus         3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   82 (288)
T cd05061           3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ   82 (288)
T ss_pred             ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            4467899999999999999995                 1         1224678999999999999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhc
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ..+++|||+++|+|.+++++.
T Consensus        83 ~~~lv~e~~~~g~L~~~l~~~  103 (288)
T cd05061          83 PTLVVMELMAHGDLKSYLRSL  103 (288)
T ss_pred             CcEEEEeCCCCCCHHHHHHHh
Confidence            999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.25  E-value=2.6e-11  Score=89.53  Aligned_cols=79  Identities=20%  Similarity=0.302  Sum_probs=67.4

Q ss_pred             CCCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      .++|++.+.||+|+||.||+                        +..+.+..|+.+++.++||||+++++.+.++...++
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l   82 (269)
T cd05065           3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMI   82 (269)
T ss_pred             hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEE
Confidence            46789999999999999996                        123467889999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      +|||+++|+|.++++.. .+.+++
T Consensus        83 v~e~~~~~~L~~~l~~~-~~~~~~  105 (269)
T cd05065          83 ITEFMENGALDSFLRQN-DGQFTV  105 (269)
T ss_pred             EEecCCCCcHHHHHhhC-CCCCCH
Confidence            99999999999999764 234444

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.25  E-value=3.1e-11  Score=88.56  Aligned_cols=83  Identities=24%  Similarity=0.378  Sum_probs=70.3

Q ss_pred             CccCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      .+..++|.+.+.||+|+||.||+                  .....+.+|+.+++.++|+||+++++.+.+...++++||
T Consensus         2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   81 (261)
T cd05034           2 EIPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE   81 (261)
T ss_pred             ccchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence            35578899999999999999997                  112468899999999999999999999999899999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      |+++++|.+++.......+++
T Consensus        82 ~~~~~~L~~~i~~~~~~~~~~  102 (261)
T cd05034          82 YMSKGSLLDFLKSGEGKKLRL  102 (261)
T ss_pred             ccCCCCHHHHHhccccCCCCH
Confidence            999999999998753234443

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.25  E-value=2.3e-12  Score=96.52  Aligned_cols=79  Identities=32%  Similarity=0.367  Sum_probs=69.0

Q ss_pred             eEE-EEEeccCCceEEEe--------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEEecc
Q 043174           76 FQL-FRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        76 ~~~-~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      |++ .++||+|+|+.|-.                    ..+..+.+|++++..+ .|+||++|+++|+++..+|+|||-+
T Consensus        79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm  158 (463)
T KOG0607|consen   79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKM  158 (463)
T ss_pred             HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecc
Confidence            444 35799999999877                    2345689999999988 5999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCCCCCcC
Q 043174          134 PGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      .||.|..+|+++  +.|+|.+|+
T Consensus       159 ~GGplLshI~~~--~~F~E~EAs  179 (463)
T KOG0607|consen  159 RGGPLLSHIQKR--KHFNEREAS  179 (463)
T ss_pred             cCchHHHHHHHh--hhccHHHHH
Confidence            999999999997  899998763

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.25  E-value=3.1e-11  Score=88.76  Aligned_cols=75  Identities=31%  Similarity=0.388  Sum_probs=66.8

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-----------c-------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-----------K-------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-----------~-------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      +..++|.+.+.||+|+||.||+           |       ..+.+.+|+.+++.++|+||+++++++...+.++++|||
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05068           3 IDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL   82 (261)
T ss_pred             cchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence            4567799999999999999997           1       134588899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhc
Q 043174          133 CPGGDLLTVSQRQ  145 (156)
Q Consensus       133 ~~~g~L~~~l~~~  145 (156)
                      +++++|.++++..
T Consensus        83 ~~~~~L~~~~~~~   95 (261)
T cd05068          83 MKYGSLLEYLQGG   95 (261)
T ss_pred             ccCCcHHHHHhcc
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.24  E-value=4e-11  Score=91.24  Aligned_cols=78  Identities=31%  Similarity=0.520  Sum_probs=64.6

Q ss_pred             CeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCC-CCCCceeEEEEeCCeEEEEE
Q 043174           75 QFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDH-PFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h-~~iv~l~~~~~~~~~~~lv~  130 (156)
                      +|.+++.||+|+||.||+            |           ..+.+..|+.++..+.| ++|+.+++++.+.+.+|+||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            588999999999999998            1           12356778888888865 56888999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ||+++|+|.+++...  +.+++..
T Consensus        81 E~~~~g~L~~~~~~~--~~~~~~~  102 (324)
T cd05587          81 EYVNGGDLMYHIQQV--GKFKEPH  102 (324)
T ss_pred             cCCCCCcHHHHHHHc--CCCCHHH
Confidence            999999999999875  5666543

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.24  E-value=7.7e-12  Score=99.64  Aligned_cols=83  Identities=28%  Similarity=0.382  Sum_probs=71.1

Q ss_pred             cCCCeEEEEEeccCCceEEEe----------------------------chhhhHHHHHHHHHhCC---CCCCCceeEEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI----------------------------KKRNRVHIEKEILKMLD---HPFLPSLFAEF  120 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~----------------------------~~~~~~~~E~~~l~~~~---h~~iv~l~~~~  120 (156)
                      ...+|..++.||+|+||.|++                            +.+..+..||.||..++   |+||+++.++|
T Consensus       559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF  638 (772)
T KOG1152|consen  559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF  638 (772)
T ss_pred             ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence            456799999999999999999                            23345788999999997   99999999999


Q ss_pred             EeCCeEEEEEec-cCCCCHHHHHHhcCCCCCCCCCcC
Q 043174          121 EASHYSRLVIEY-CPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus       121 ~~~~~~~lv~E~-~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      ++++..|++||- -+|-||+++|..+  ..++|.+|+
T Consensus       639 Eddd~yyl~te~hg~gIDLFd~IE~k--p~m~E~eAk  673 (772)
T KOG1152|consen  639 EDDDYYYLETEVHGEGIDLFDFIEFK--PRMDEPEAK  673 (772)
T ss_pred             ecCCeeEEEecCCCCCcchhhhhhcc--CccchHHHH
Confidence            999999999996 3455999999986  778887764

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.24  E-value=4.5e-11  Score=99.34  Aligned_cols=79  Identities=24%  Similarity=0.490  Sum_probs=69.0

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      +++|.+.+.||+|+||.||+            |           ....+..|+.++..++|+||+++++++.....+|+|
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV   82 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV   82 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence            57899999999999999998            1           125678899999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCC
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |||++||+|.++|...  +.+++.
T Consensus        83 mEy~~g~~L~~li~~~--~~l~~~  104 (669)
T cd05610          83 MEYLIGGDVKSLLHIY--GYFDEE  104 (669)
T ss_pred             EeCCCCCCHHHHHHhc--CCCCHH
Confidence            9999999999999875  556554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.24  E-value=1.9e-11  Score=100.58  Aligned_cols=82  Identities=24%  Similarity=0.383  Sum_probs=67.3

Q ss_pred             CCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCC-CCCCCceeEE-EEe---C---C
Q 043174           73 LDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLD-HPFLPSLFAE-FEA---S---H  124 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~-h~~iv~l~~~-~~~---~---~  124 (156)
                      ..++++.+.|.+|+|+.||+                    ...+.+.+||++|+.|. |+|||.+++. ...   .   -
T Consensus        36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~  115 (738)
T KOG1989|consen   36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW  115 (738)
T ss_pred             CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence            45567889999999999999                    34678999999999995 9999999993 211   1   2


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      .++|+||||+||.|.+++.++...+|+|.+
T Consensus       116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~e  145 (738)
T KOG1989|consen  116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDE  145 (738)
T ss_pred             EEEeehhhccCCcHHHHHHHHHhccCChHH
Confidence            478999999999999999876556788865

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.24  E-value=2.5e-11  Score=91.47  Aligned_cols=78  Identities=24%  Similarity=0.366  Sum_probs=67.3

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe-----------------c---------hhhhHHHHHHHHHhC-CCCCCCceeEEE
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI-----------------K---------KRNRVHIEKEILKML-DHPFLPSLFAEF  120 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~-----------------~---------~~~~~~~E~~~l~~~-~h~~iv~l~~~~  120 (156)
                      .+++..++|.+.+.||+|+||.||+                 |         ..+.+.+|+.++..+ +|+||+++++.+
T Consensus        29 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  108 (302)
T cd05055          29 KWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGAC  108 (302)
T ss_pred             cccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEE
Confidence            3456667899999999999999985                 1         123577899999999 799999999999


Q ss_pred             EeCCeEEEEEeccCCCCHHHHHHhc
Q 043174          121 EASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       121 ~~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ...+.++++|||+++|+|.++++..
T Consensus       109 ~~~~~~~lv~e~~~~~~L~~~i~~~  133 (302)
T cd05055         109 TIGGPILVITEYCCYGDLLNFLRRK  133 (302)
T ss_pred             ecCCceEEEEEcCCCCcHHHHHHhC
Confidence            9999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.23  E-value=5.2e-11  Score=89.03  Aligned_cols=78  Identities=28%  Similarity=0.336  Sum_probs=64.6

Q ss_pred             eEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           76 FQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      |+..+.||+|+||.||+            +           ....+.+|+.++..++|++|+.+++.+.+.+.++++|||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            67888999999999998            1           112466799999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +++|+|.+++.......+++.
T Consensus        82 ~~g~~L~~~l~~~~~~~l~~~  102 (285)
T cd05630          82 MNGGDLKFHIYHMGEAGFEEG  102 (285)
T ss_pred             cCCCcHHHHHHHhcccCCCHH
Confidence            999999999876422345543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.23  E-value=5.2e-11  Score=93.19  Aligned_cols=81  Identities=19%  Similarity=0.315  Sum_probs=68.5

Q ss_pred             CccCCCeEEEEEeccCCceEEEe------------c--hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI------------K--KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~------------~--~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      .+....|.+.+.||+|+||.||+            |  ....+.+|+.+++.++||||+++++++......++++|++. 
T Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-  166 (391)
T PHA03212         88 GIEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQRGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-  166 (391)
T ss_pred             ccccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhhhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-
Confidence            35567899999999999999998            1  23457899999999999999999999999999999999995 


Q ss_pred             CCHHHHHHhcCCCCCCCC
Q 043174          136 GDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       136 g~L~~~l~~~~~~~~~e~  153 (156)
                      ++|..++...  +.+++.
T Consensus       167 ~~L~~~l~~~--~~l~~~  182 (391)
T PHA03212        167 TDLYCYLAAK--RNIAIC  182 (391)
T ss_pred             CCHHHHHHhc--CCCCHH
Confidence            7999998775  455543

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.23  E-value=2.8e-11  Score=92.37  Aligned_cols=73  Identities=33%  Similarity=0.526  Sum_probs=60.9

Q ss_pred             EEeccCCceEEEe-----------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           80 RRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        80 ~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      +.||+|+||.||+                       .....+.+|+.++..+ +||||+++++++.+.+.+|+||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            3699999999998                       1123467788888776 899999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCCCCCC
Q 043174          136 GDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       136 g~L~~~l~~~~~~~~~e~~  154 (156)
                      |+|..++.+.  +.+++..
T Consensus        81 ~~L~~~~~~~--~~l~~~~   97 (329)
T cd05618          81 GDLMFHMQRQ--RKLPEEH   97 (329)
T ss_pred             CCHHHHHHHc--CCCCHHH
Confidence            9999998875  5676653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.23  E-value=3.4e-11  Score=88.44  Aligned_cols=81  Identities=23%  Similarity=0.454  Sum_probs=67.0

Q ss_pred             ccCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      +..++|++.+.||+|+||.||+                  .....+.+|+.+++.++|+||+++++.+. .+.++++|||
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~   81 (260)
T cd05067           3 VPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY   81 (260)
T ss_pred             cchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence            4567899999999999999998                  12346889999999999999999999874 5678999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e  152 (156)
                      +++|+|.+++.......+++
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~  101 (260)
T cd05067          82 MENGSLVDFLKTPEGIKLTI  101 (260)
T ss_pred             CCCCCHHHHHHhcCCCCCCH
Confidence            99999999997653344443

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.23  E-value=2.6e-12  Score=95.52  Aligned_cols=74  Identities=24%  Similarity=0.343  Sum_probs=63.8

Q ss_pred             CCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           74 DQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      +.|+.+.++|+|+||.||+                      ...+..++||++|++++|+|+|.|..+|.....+++|+|
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE   81 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE   81 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence            5678888999999999999                      123457999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCC
Q 043174          132 YCPGGDLLTVSQRQRRL  148 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~  148 (156)
                      ||+. ++.+-|.+.+.|
T Consensus        82 ~~dh-TvL~eLe~~p~G   97 (396)
T KOG0593|consen   82 YCDH-TVLHELERYPNG   97 (396)
T ss_pred             ecch-HHHHHHHhccCC
Confidence            9986 777777776544

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.23  E-value=5.2e-11  Score=86.98  Aligned_cols=78  Identities=23%  Similarity=0.448  Sum_probs=66.6

Q ss_pred             CeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           75 QFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      +|.+.+.||+|+||.||+                      .....+.+|+.+++.++||||+++++.+.+.+..+++|||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            478889999999999998                      2245678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e  152 (156)
                      +++++|.+++.......+++
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~  100 (256)
T cd08529          81 AENGDLHKLLKMQRGRPLPE  100 (256)
T ss_pred             CCCCcHHHHHHHhcCCCCCH
Confidence            99999999998753334443

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.22  E-value=4e-11  Score=91.28  Aligned_cols=78  Identities=32%  Similarity=0.539  Sum_probs=64.3

Q ss_pred             CeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCC-CCCCCceeEEEEeCCeEEEEE
Q 043174           75 QFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLD-HPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      +|...+.||+|+||.||+            |           ..+.+..|+.++..+. |++|+++++++.+.+.+|+||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            477889999999999998            1           1234667888888774 678889999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ||+++|+|..++.+.  +.+++..
T Consensus        81 Ey~~~g~L~~~i~~~--~~l~~~~  102 (323)
T cd05615          81 EYVNGGDLMYHIQQV--GKFKEPQ  102 (323)
T ss_pred             cCCCCCcHHHHHHHc--CCCCHHH
Confidence            999999999999875  6677654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.22  E-value=2.2e-11  Score=90.49  Aligned_cols=56  Identities=13%  Similarity=0.169  Sum_probs=47.8

Q ss_pred             hHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174           97 RVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus        97 ~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      .+.+|+.+++.++||||+++++++.+....++||||+++|+|..++++. .+.+++.
T Consensus        62 ~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~  117 (274)
T cd05076          62 AFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVA  117 (274)
T ss_pred             HHHHHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHH
Confidence            5677888999999999999999999999999999999999999998764 2445543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.22  E-value=7.7e-13  Score=102.83  Aligned_cols=83  Identities=30%  Similarity=0.390  Sum_probs=71.9

Q ss_pred             cCCCeEEEEEeccCCceEEEe---------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEE-eC
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI---------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFE-AS  123 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~---------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~-~~  123 (156)
                      ..+.|-++.+||+|+|+.||+                           ....+..+|.+|.+.+.||.||++|++|. |.
T Consensus       461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt  540 (775)
T KOG1151|consen  461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT  540 (775)
T ss_pred             hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence            345577788999999999999                           23457899999999999999999999875 56


Q ss_pred             CeEEEEEeccCCCCHHHHHHhcCCCCCCCCCcC
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      +.+|-|+|||+|.||..||+.+  +.++|.+||
T Consensus       541 dsFCTVLEYceGNDLDFYLKQh--klmSEKEAR  571 (775)
T KOG1151|consen  541 DSFCTVLEYCEGNDLDFYLKQH--KLMSEKEAR  571 (775)
T ss_pred             ccceeeeeecCCCchhHHHHhh--hhhhHHHHH
Confidence            6799999999999999999997  889998875

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.22  E-value=9.2e-11  Score=85.95  Aligned_cols=80  Identities=29%  Similarity=0.479  Sum_probs=69.3

Q ss_pred             CCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           73 LDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      .++|++.+.||+|+||.||+                    ...+.+.+|+.+++.++||||+++++.+.+...+|++|||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            46799999999999999998                    1245688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +++++|.+++... ...+++.
T Consensus        82 ~~~~~l~~~~~~~-~~~l~~~  101 (262)
T cd06613          82 CGGGSLQDIYQVT-RGPLSEL  101 (262)
T ss_pred             CCCCcHHHHHHhh-ccCCCHH
Confidence            9999999998764 2455554

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.22  E-value=1e-11  Score=92.22  Aligned_cols=80  Identities=24%  Similarity=0.468  Sum_probs=68.5

Q ss_pred             CCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           74 DQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      ++|++.+.||.|+||.||+                    ...+.+.+|+.+++.++|+||+++++.+..+..+|++|||+
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC   84 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence            5688899999999999999                    12346788999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCCCCC
Q 043174          134 PGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ++|+|..++.+. ...+++..
T Consensus        85 ~~~~L~~~~~~~-~~~l~~~~  104 (280)
T cd06611          85 DGGALDSIMLEL-ERGLTEPQ  104 (280)
T ss_pred             CCCcHHHHHHHh-cCCCCHHH
Confidence            999999999764 24466543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.22  E-value=3.9e-11  Score=88.53  Aligned_cols=69  Identities=30%  Similarity=0.533  Sum_probs=59.5

Q ss_pred             EEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           77 QLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        77 ~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      ++.+.||.|.||.||+                         +..+.+.+|+.++..++||||++++|++...+.+++|+|
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e   81 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME   81 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence            5778999999999999                         124678999999999999999999999998888999999


Q ss_pred             ccCCCCHHHHHHhc
Q 043174          132 YCPGGDLLTVSQRQ  145 (156)
Q Consensus       132 ~~~~g~L~~~l~~~  145 (156)
                      |+++|+|.++|...
T Consensus        82 ~~~~g~L~~~L~~~   95 (259)
T PF07714_consen   82 YCPGGSLDDYLKSK   95 (259)
T ss_dssp             --TTEBHHHHHHHT
T ss_pred             cccccccccccccc
Confidence            99999999999885

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.22  E-value=5.9e-11  Score=90.25  Aligned_cols=78  Identities=32%  Similarity=0.526  Sum_probs=64.4

Q ss_pred             CeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEE
Q 043174           75 QFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      +|.+.+.||+|+||.||+            |           ..+....|+.++..+ +|++|+.+++++.+.+.+|+||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            588999999999999998            1           122356677777776 6899999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ||+++|+|..++...  +.+++..
T Consensus        81 E~~~~g~L~~~~~~~--~~~~~~~  102 (323)
T cd05616          81 EYVNGGDLMYQIQQV--GRFKEPH  102 (323)
T ss_pred             cCCCCCCHHHHHHHc--CCCCHHH
Confidence            999999999999875  5676643

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.22  E-value=6.6e-11  Score=86.42  Aligned_cols=79  Identities=25%  Similarity=0.443  Sum_probs=67.1

Q ss_pred             CeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           75 QFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      +|.+.+.||+|+||.||+                      ...+.+.+|+.+++.++||||+++++.+...+.++++|||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            478899999999999997                      1234688899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +++++|.+++.......+++.
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~  101 (256)
T cd08220          81 APGGTLAEYIQKRCNSLLDED  101 (256)
T ss_pred             CCCCCHHHHHHHhcccCCCHH
Confidence            999999999987532335443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.22  E-value=1e-11  Score=91.19  Aligned_cols=80  Identities=29%  Similarity=0.384  Sum_probs=68.6

Q ss_pred             CCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      ..+|.+.+.||.|+||.||+                   .....+..|+.+++.++|+||+++++++.+...++++|||+
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   84 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELM   84 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeec
Confidence            45688899999999999997                   13456888999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCCC
Q 043174          134 PGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~~e  152 (156)
                      ++|+|.++++....+.+++
T Consensus        85 ~~~~L~~~~~~~~~~~~~~  103 (261)
T cd05148          85 EKGSLLAFLRSPEGQVLPV  103 (261)
T ss_pred             ccCCHHHHHhcCCCCCCCH
Confidence            9999999998753344443

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.22  E-value=4.1e-11  Score=88.98  Aligned_cols=75  Identities=25%  Similarity=0.434  Sum_probs=65.8

Q ss_pred             ccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      +..++|++.+.||+|+||.||+                          .....+.+|+.++..++||||+++++++.+..
T Consensus         2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~   81 (283)
T cd05048           2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ   81 (283)
T ss_pred             CChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC
Confidence            3456789999999999999996                          11235788999999999999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhc
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ..+++|||+++|+|.+++...
T Consensus        82 ~~~~~~e~~~~~~L~~~l~~~  102 (283)
T cd05048          82 PTCMLFEYLAHGDLHEFLVRN  102 (283)
T ss_pred             ceEEEEecCCCCcHHHHHHhc
Confidence            999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.22  E-value=3.9e-11  Score=88.63  Aligned_cols=77  Identities=26%  Similarity=0.376  Sum_probs=66.2

Q ss_pred             CeEEEEEeccCCceEEEe------------ch------------------hhhHHHHHHHHHhCCCCCCCceeEEEEeCC
Q 043174           75 QFQLFRRLGSGIIRSVYI------------KK------------------RNRVHIEKEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~------------~~------------------~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      +|.+.+.||.|+||.||+            +.                  .+.+..|+.++..++|+||+++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            477889999999999998            11                  134678999999999999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      .+++||||+++|+|.+++++.  +.+++.
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~  108 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQ  108 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhc--cCCCHH
Confidence            999999999999999999875  556654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.21  E-value=4.2e-11  Score=87.71  Aligned_cols=82  Identities=20%  Similarity=0.314  Sum_probs=69.6

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-----------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-----------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-----------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      +..++|++.+.||.|+||.||+                 ...+.+.+|+.++..++|+||+++++.+.+....+++|||+
T Consensus         3 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   82 (256)
T cd05039           3 INSKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM   82 (256)
T ss_pred             cChhhccceeeeecCCCceEEEEEecCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence            4467899999999999999997                 12456888999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCCC
Q 043174          134 PGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~~e  152 (156)
                      ++++|.++++......+++
T Consensus        83 ~~~~L~~~~~~~~~~~~~~  101 (256)
T cd05039          83 AKGSLVDYLRSRGRAVITL  101 (256)
T ss_pred             CCCcHHHHHHhcCCCCCCH
Confidence            9999999998752224443

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.21  E-value=5.2e-11  Score=88.11  Aligned_cols=76  Identities=21%  Similarity=0.346  Sum_probs=66.5

Q ss_pred             CccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS  123 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~  123 (156)
                      .+..++|.+.+.||+|+||.||+                          .....+.+|+.++..++|+||+++++++...
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~   81 (277)
T cd05032           2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG   81 (277)
T ss_pred             ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC
Confidence            35567899999999999999996                          1123577899999999999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHHhc
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ...+++|||+++|+|.+++...
T Consensus        82 ~~~~~v~e~~~~~~L~~~l~~~  103 (277)
T cd05032          82 QPTLVVMELMAKGDLKSYLRSR  103 (277)
T ss_pred             CCcEEEEecCCCCCHHHHHHhc
Confidence            9999999999999999999764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.21  E-value=6.1e-11  Score=89.40  Aligned_cols=77  Identities=23%  Similarity=0.337  Sum_probs=66.1

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe----------------------------chhhhHHHHHHHHHhC-CCCCCCceeEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI----------------------------KKRNRVHIEKEILKML-DHPFLPSLFAE  119 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~----------------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~  119 (156)
                      +.+..++|.+.+.||+|+||.||+                            +....+.+|+.++..+ +|+||+++++.
T Consensus        13 ~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~   92 (307)
T cd05098          13 WEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA   92 (307)
T ss_pred             ceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence            344457899999999999999995                            1123467799999998 79999999999


Q ss_pred             EEeCCeEEEEEeccCCCCHHHHHHhc
Q 043174          120 FEASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       120 ~~~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +...+.+|++|||+++|+|.++|..+
T Consensus        93 ~~~~~~~~lv~e~~~~~~L~~~i~~~  118 (307)
T cd05098          93 CTQDGPLYVIVEYASKGNLREYLRAR  118 (307)
T ss_pred             EecCCceEEEEecCCCCcHHHHHHhc
Confidence            99999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.21  E-value=4.6e-11  Score=88.09  Aligned_cols=81  Identities=19%  Similarity=0.199  Sum_probs=67.8

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR  127 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~  127 (156)
                      ..++|+..+.||+|+||.||+                        ...+.+..|+.++..++|+||+++++++.+.+..+
T Consensus         3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (268)
T cd05063           3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM   82 (268)
T ss_pred             ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence            346788999999999999996                        11345778999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++|||+++|+|.+++... .+.+++.
T Consensus        83 lv~e~~~~~~L~~~~~~~-~~~~~~~  107 (268)
T cd05063          83 IITEYMENGALDKYLRDH-DGEFSSY  107 (268)
T ss_pred             EEEEcCCCCCHHHHHHhc-CCCCCHH
Confidence            999999999999999764 2445543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.21  E-value=9.1e-11  Score=87.63  Aligned_cols=78  Identities=27%  Similarity=0.328  Sum_probs=64.7

Q ss_pred             eEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           76 FQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      |...+.||+|+||.||+            +           ....+.+|+.++..++|+||+.+++.+.+++.++++|||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            67788999999999998            1           112367899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +++|+|..++.......+++.
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~  102 (285)
T cd05632          82 MNGGDLKFHIYNMGNPGFEEE  102 (285)
T ss_pred             ccCccHHHHHHHhcCCCCCHH
Confidence            999999998876422345554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.21  E-value=4.5e-11  Score=89.60  Aligned_cols=74  Identities=24%  Similarity=0.337  Sum_probs=64.5

Q ss_pred             cCCCeEEEEEeccCCceEEEe-----------------------------------chhhhHHHHHHHHHhCCCCCCCce
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI-----------------------------------KKRNRVHIEKEILKMLDHPFLPSL  116 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~-----------------------------------~~~~~~~~E~~~l~~~~h~~iv~l  116 (156)
                      ...+|.+.+.||+|+||.||+                                   .....+.+|++++..++|+||+++
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~   82 (295)
T cd05097           3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRL   82 (295)
T ss_pred             chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence            346789999999999999984                                   112357789999999999999999


Q ss_pred             eEEEEeCCeEEEEEeccCCCCHHHHHHhc
Q 043174          117 FAEFEASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       117 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ++++...+.++++|||+++++|.+++...
T Consensus        83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  111 (295)
T cd05097          83 LGVCVSDDPLCMITEYMENGDLNQFLSQR  111 (295)
T ss_pred             EEEEcCCCccEEEEecCCCCcHHHHHHhc
Confidence            99999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.21  E-value=1.1e-10  Score=98.95  Aligned_cols=72  Identities=21%  Similarity=0.363  Sum_probs=64.8

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      +++|.+.+.||+|+||.||+            |           ..+.+.+|+.++..++||||+++++++.+.+..|++
T Consensus         1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV   80 (932)
T PRK13184          1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT   80 (932)
T ss_pred             CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence            36799999999999999998            1           123578899999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHHh
Q 043174          130 IEYCPGGDLLTVSQR  144 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~  144 (156)
                      |||++||+|.+++..
T Consensus        81 MEY~eGGSL~~lL~s   95 (932)
T PRK13184         81 MPYIEGYTLKSLLKS   95 (932)
T ss_pred             EEcCCCCCHHHHHHH
Confidence            999999999999975

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.20  E-value=5.8e-11  Score=88.09  Aligned_cols=75  Identities=21%  Similarity=0.320  Sum_probs=65.2

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-----------------c---------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCC
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-----------------K---------KRNRVHIEKEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-----------------~---------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      +..++|++.+.||+|+||.||+                 +         ....+.+|+.+++.++||||+++++++....
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~   82 (277)
T cd05062           3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ   82 (277)
T ss_pred             ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            3457799999999999999994                 1         1224678999999999999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhc
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ..+++|||+++|+|.+++++.
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~  103 (277)
T cd05062          83 PTLVIMELMTRGDLKSYLRSL  103 (277)
T ss_pred             CeEEEEecCCCCCHHHHHHHc
Confidence            999999999999999999764

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.20  E-value=8.7e-11  Score=86.54  Aligned_cols=78  Identities=22%  Similarity=0.330  Sum_probs=65.2

Q ss_pred             CCeEEEEEeccCCceEEEe------------c-------------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC--CeE
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K-------------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS--HYS  126 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~-------------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~--~~~  126 (156)
                      .+|++.+.||+|+||.||.            +             ..+.+.+|+.++..++||||+++++.+.+.  ..+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            5789999999999999998            1             123577899999999999999999988763  568


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +++|||+++|+|.+++.+.  +.+++.
T Consensus        82 ~~v~e~~~~~~L~~~l~~~--~~~~~~  106 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSY--GALTEN  106 (265)
T ss_pred             EEEEEecCCCcHHHHHHHc--CCCCHH
Confidence            8999999999999999875  445543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.20  E-value=7.7e-11  Score=89.05  Aligned_cols=80  Identities=44%  Similarity=0.804  Sum_probs=68.7

Q ss_pred             CCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ++|++.+.||+|+||.||+                       ...+.+..|++++..+.|+||+++++.+.+...+|++|
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            4689999999999999998                       12345788999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||+.+++|.+++.+.+...+++.
T Consensus        81 e~~~~~~L~~~~~~~~~~~l~~~  103 (316)
T cd05574          81 DYCPGGELFRLLQRQPGKCLSEE  103 (316)
T ss_pred             EecCCCCHHHHHHhCCCCccCHH
Confidence            99999999999987544556554

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.20  E-value=2.7e-11  Score=88.81  Aligned_cols=77  Identities=34%  Similarity=0.555  Sum_probs=67.2

Q ss_pred             CeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           75 QFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      +|++.+.||.|+||.||+                       +..+.+.+|+.+++.++||||+++++.+.....+++++|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            488999999999999999                       123567889999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |+++++|.+++...  ..+++.
T Consensus        81 ~~~~~~L~~~l~~~--~~l~~~  100 (258)
T cd05578          81 LLLGGDLRYHLSQK--VKFSEE  100 (258)
T ss_pred             CCCCCCHHHHHHhc--CCcCHH
Confidence            99999999999875  455543

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.20  E-value=4.5e-11  Score=91.13  Aligned_cols=73  Identities=33%  Similarity=0.512  Sum_probs=61.6

Q ss_pred             EEeccCCceEEEe-----------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           80 RRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        80 ~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      +.||+|+||.||+                       ...+.+..|+.++..+ +||||+.+++++.+.+.+|+||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            3699999999997                       1223467888888887 699999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCCCCCC
Q 043174          136 GDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       136 g~L~~~l~~~~~~~~~e~~  154 (156)
                      |+|..++...  +.+++..
T Consensus        81 ~~L~~~~~~~--~~l~~~~   97 (327)
T cd05617          81 GDLMFHMQRQ--RKLPEEH   97 (327)
T ss_pred             CcHHHHHHHc--CCCCHHH
Confidence            9999999875  5677654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.20  E-value=8.9e-11  Score=85.91  Aligned_cols=78  Identities=26%  Similarity=0.500  Sum_probs=66.0

Q ss_pred             CeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           75 QFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      +|++.+.||+|+||.||+                      +....+.+|+.+++.++||||+++++.+...+..++++||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            478899999999999998                      1123578899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e  152 (156)
                      +++++|.+++.......+++
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~  100 (256)
T cd08218          81 CEGGDLYKKINAQRGVLFPE  100 (256)
T ss_pred             CCCCcHHHHHHhccCCCCCH
Confidence            99999999997642233443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.20  E-value=1.2e-10  Score=85.77  Aligned_cols=71  Identities=28%  Similarity=0.471  Sum_probs=63.4

Q ss_pred             CCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ++|++.+.||+|+||.||+            +           ....+.+|+.+++.++||||+++++.+.+.+..++++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            6799999999999999998            1           1235788999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHh
Q 043174          131 EYCPGGDLLTVSQR  144 (156)
Q Consensus       131 E~~~~g~L~~~l~~  144 (156)
                      ||+++|+|.+++..
T Consensus        82 e~~~~~~L~~~~~~   95 (267)
T cd08228          82 ELADAGDLSQMIKY   95 (267)
T ss_pred             EecCCCcHHHHHHH
Confidence            99999999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.20  E-value=4.8e-11  Score=89.22  Aligned_cols=81  Identities=25%  Similarity=0.483  Sum_probs=68.3

Q ss_pred             cCCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      ..+.|++++.||.|+||.||+                    +..+.+.+|+.+++.+.|+||+++++.+..++.++++||
T Consensus        10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   89 (292)
T cd06644          10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE   89 (292)
T ss_pred             cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence            346799999999999999998                    224567889999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |+++++|..++.+. ...+++.
T Consensus        90 ~~~~~~l~~~~~~~-~~~l~~~  110 (292)
T cd06644          90 FCPGGAVDAIMLEL-DRGLTEP  110 (292)
T ss_pred             cCCCCcHHHHHHhh-cCCCCHH
Confidence            99999999888654 2445543

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.20  E-value=6.9e-12  Score=96.85  Aligned_cols=84  Identities=29%  Similarity=0.476  Sum_probs=73.0

Q ss_pred             CccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCe
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHY  125 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~  125 (156)
                      .+...+|..+.+||+|+||+|.+                       ...+..+.|.++|... +-|++++++.+|++-++
T Consensus       345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR  424 (683)
T KOG0696|consen  345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR  424 (683)
T ss_pred             ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence            45667899999999999999999                       2234567788888776 57899999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      +|+||||+.||||.-+|++.  +.|.|..|
T Consensus       425 LyFVMEyvnGGDLMyhiQQ~--GkFKEp~A  452 (683)
T KOG0696|consen  425 LYFVMEYVNGGDLMYHIQQV--GKFKEPVA  452 (683)
T ss_pred             eeeEEEEecCchhhhHHHHh--cccCCchh
Confidence            99999999999999999997  89999876

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.20  E-value=1.6e-11  Score=90.54  Aligned_cols=80  Identities=24%  Similarity=0.401  Sum_probs=68.1

Q ss_pred             CCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           73 LDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      .++|.+.+.||+|+||.||+                    .....+.+|+.++..++||||+++++.+...+.+|++|||
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~   87 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF   87 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence            45788888999999999998                    1123467899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      +++|+|.+++...  +.+++..
T Consensus        88 ~~~~~L~~~~~~~--~~~~~~~  107 (267)
T cd06645          88 CGGGSLQDIYHVT--GPLSESQ  107 (267)
T ss_pred             cCCCcHHHHHHhc--CCCCHHH
Confidence            9999999999875  5666543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.19  E-value=4.6e-11  Score=87.36  Aligned_cols=75  Identities=35%  Similarity=0.639  Sum_probs=63.6

Q ss_pred             eEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           76 FQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      |++.+.||+|+||.||+                      .......+|+.++..++||||+++++++.+...++++||++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            78899999999999999                      11122355899999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCCC
Q 043174          134 PGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~~e  152 (156)
                      ++++|.+++.+.  +.+++
T Consensus        81 ~~~~L~~~l~~~--~~~~~   97 (260)
T PF00069_consen   81 PGGSLQDYLQKN--KPLSE   97 (260)
T ss_dssp             TTEBHHHHHHHH--SSBBH
T ss_pred             cccccccccccc--ccccc
Confidence            999999999843  45543

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.19  E-value=1.2e-10  Score=87.88  Aligned_cols=73  Identities=23%  Similarity=0.305  Sum_probs=63.5

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------c---------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------K---------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------~---------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ..++|.+.+.||+|+||.||+            |         ....+.+|+.++..++||||+++++++.+++..+++|
T Consensus         4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   83 (309)
T cd07872           4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF   83 (309)
T ss_pred             CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence            357899999999999999998            1         1224678999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhc
Q 043174          131 EYCPGGDLLTVSQRQ  145 (156)
Q Consensus       131 E~~~~g~L~~~l~~~  145 (156)
                      ||+++ +|.+++...
T Consensus        84 e~~~~-~l~~~~~~~   97 (309)
T cd07872          84 EYLDK-DLKQYMDDC   97 (309)
T ss_pred             eCCCC-CHHHHHHhc
Confidence            99985 899988764

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.19  E-value=6.6e-11  Score=89.88  Aligned_cols=73  Identities=36%  Similarity=0.566  Sum_probs=61.0

Q ss_pred             EEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           80 RRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        80 ~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      +.||+|+||.||+            |           ....+.+|+.++..+ +||||+++++++.+.+.+|+||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3689999999998            1           123456788888877 799999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCCCCCC
Q 043174          136 GDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       136 g~L~~~l~~~~~~~~~e~~  154 (156)
                      |+|..++.+.  +.+++..
T Consensus        81 ~~L~~~~~~~--~~l~~~~   97 (318)
T cd05570          81 GDLMFHIQRS--GRFDEPR   97 (318)
T ss_pred             CCHHHHHHHc--CCCCHHH
Confidence            9999999875  5676654

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.19  E-value=3.6e-11  Score=92.28  Aligned_cols=76  Identities=21%  Similarity=0.311  Sum_probs=63.6

Q ss_pred             CccCCCeEEEEEeccCCceEEEe-----------------c---------hhhhHHHHHHHHHhC-CCCCCCceeEEEEe
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI-----------------K---------KRNRVHIEKEILKML-DHPFLPSLFAEFEA  122 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~-----------------~---------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~  122 (156)
                      .+..++|++.+.||+|+||.||+                 |         ....+.+|+.++..+ +||||+++++.+..
T Consensus         3 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   82 (343)
T cd05103           3 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK   82 (343)
T ss_pred             ccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeec
Confidence            44567899999999999999996                 1         123577899999999 78999999997765


Q ss_pred             -CCeEEEEEeccCCCCHHHHHHhc
Q 043174          123 -SHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       123 -~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                       ...++++|||+++|+|.+++...
T Consensus        83 ~~~~~~lv~ey~~~g~L~~~i~~~  106 (343)
T cd05103          83 PGGPLMVIVEFCKFGNLSNYLRSK  106 (343)
T ss_pred             CCCceEEEEeccCCCcHHHHHHhc
Confidence             45789999999999999999764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.19  E-value=5.3e-11  Score=90.43  Aligned_cols=73  Identities=36%  Similarity=0.579  Sum_probs=60.4

Q ss_pred             EEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           80 RRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        80 ~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      +.||+|+||.||+            |           ..+.+..|+.++..+ +||||+++++++.+.+.+|+||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            3689999999998            1           123456788888865 899999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCCCCCC
Q 043174          136 GDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       136 g~L~~~l~~~~~~~~~e~~  154 (156)
                      |+|..++.+.  +.+++..
T Consensus        81 ~~L~~~l~~~--~~~~~~~   97 (321)
T cd05591          81 GDLMFQIQRS--RKFDEPR   97 (321)
T ss_pred             CcHHHHHHHc--CCCCHHH
Confidence            9999999875  5666543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.19  E-value=7.5e-11  Score=88.72  Aligned_cols=77  Identities=22%  Similarity=0.339  Sum_probs=67.4

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe----------------------------chhhhHHHHHHHHHhC-CCCCCCceeEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI----------------------------KKRNRVHIEKEILKML-DHPFLPSLFAE  119 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~----------------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~  119 (156)
                      ..+..++|.+.+.||+|+||.||+                            +..+.+.+|+.++..+ +||||+++++.
T Consensus        10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~   89 (304)
T cd05101          10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA   89 (304)
T ss_pred             ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEE
Confidence            456678899999999999999994                            1123577899999999 89999999999


Q ss_pred             EEeCCeEEEEEeccCCCCHHHHHHhc
Q 043174          120 FEASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       120 ~~~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +.....++++|||+++|+|.++|.++
T Consensus        90 ~~~~~~~~lv~e~~~~~~L~~~l~~~  115 (304)
T cd05101          90 CTQDGPLYVIVEYASKGNLREYLRAR  115 (304)
T ss_pred             EecCCceEEEEecCCCCcHHHHHHhc
Confidence            99999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.19  E-value=1.1e-10  Score=86.06  Aligned_cols=82  Identities=20%  Similarity=0.280  Sum_probs=68.8

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      +...+|.+.+.||+|+||.||+                   .....+.+|+.++..+.|+||+++++.+..+..++++||
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (263)
T cd05052           3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   82 (263)
T ss_pred             CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEE
Confidence            4456789999999999999998                   123467889999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      |+++|+|.+++.......+++
T Consensus        83 ~~~~~~L~~~~~~~~~~~l~~  103 (263)
T cd05052          83 FMTYGNLLDYLRECNRQEVNA  103 (263)
T ss_pred             eCCCCcHHHHHHhCCCCCCCH
Confidence            999999999997642233443

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.19  E-value=3.6e-11  Score=91.51  Aligned_cols=76  Identities=18%  Similarity=0.182  Sum_probs=62.1

Q ss_pred             EEEEeccC--CceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           78 LFRRLGSG--IIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        78 ~~~~lG~G--~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      ++++||+|  +|+.||+            |          ..+.+.+|+.+++.++||||+++++++.+++.+++||||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            45678999  6788888            1          1235778999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCCCC
Q 043174          134 PGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++|+|.+++..+....+++.
T Consensus        82 ~~~~l~~~~~~~~~~~l~~~  101 (327)
T cd08227          82 AYGSAKDLICTHFMDGMSEL  101 (327)
T ss_pred             CCCcHHHHHHhhccCCCCHH
Confidence            99999999976533445543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.19  E-value=1.8e-11  Score=99.13  Aligned_cols=70  Identities=40%  Similarity=0.617  Sum_probs=60.0

Q ss_pred             CeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC------eEE
Q 043174           75 QFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH------YSR  127 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~------~~~  127 (156)
                      .+...+.||+|+||.||+                     +..+...+|+++|++++|+|||+++++-++..      ...
T Consensus        14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v   93 (732)
T KOG4250|consen   14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV   93 (732)
T ss_pred             ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence            356678999999999999                     34567899999999999999999998776654      356


Q ss_pred             EEEeccCCCCHHHHHHh
Q 043174          128 LVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~  144 (156)
                      ++||||.||+|+..+++
T Consensus        94 lvmEyC~gGsL~~~L~~  110 (732)
T KOG4250|consen   94 LVMEYCSGGSLRKVLNS  110 (732)
T ss_pred             EEEeecCCCcHHHHhcC
Confidence            89999999999999975

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.19  E-value=5.7e-11  Score=90.32  Aligned_cols=73  Identities=34%  Similarity=0.566  Sum_probs=60.6

Q ss_pred             EEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           80 RRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        80 ~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      +.||+|+||.||+            |           ..+.+..|+.++..+ +||||+++++++.+.+.+|+||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            3689999999998            1           123456788888776 699999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCCCCCC
Q 043174          136 GDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       136 g~L~~~l~~~~~~~~~e~~  154 (156)
                      |+|..++.+.  +.+++..
T Consensus        81 g~L~~~i~~~--~~l~~~~   97 (320)
T cd05590          81 GDLMFHIQKS--RRFDEAR   97 (320)
T ss_pred             chHHHHHHHc--CCCCHHH
Confidence            9999999875  5676654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.18  E-value=1.2e-10  Score=87.59  Aligned_cols=79  Identities=24%  Similarity=0.296  Sum_probs=66.3

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------c---------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------K---------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------~---------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ..++|.+.+.||+|+||.||+            +         ....+.+|+.++..++||||+++++++..++.++++|
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~   83 (301)
T cd07873           4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF   83 (301)
T ss_pred             cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence            457899999999999999998            1         1234678999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      ||++ ++|.+++.+. ...+++
T Consensus        84 e~~~-~~l~~~l~~~-~~~~~~  103 (301)
T cd07873          84 EYLD-KDLKQYLDDC-GNSINM  103 (301)
T ss_pred             eccc-cCHHHHHHhc-CCCCCH
Confidence            9997 5999988764 234544

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.18  E-value=5e-11  Score=87.71  Aligned_cols=77  Identities=19%  Similarity=0.326  Sum_probs=66.7

Q ss_pred             CeEEEEEeccCCceEEEe------------c--------------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           75 QFQLFRRLGSGIIRSVYI------------K--------------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~------------~--------------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      +|+..+.||+|+||.||.            +              ..+.+.+|+.+++.++|+||+++++.+.+.+.+++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            467788999999999997            0              23467889999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++||+++++|.+++++.  +.+++.
T Consensus        81 v~e~~~~~~L~~~l~~~--~~~~~~  103 (268)
T cd06630          81 FVEWMAGGSVSHLLSKY--GAFKEA  103 (268)
T ss_pred             EEeccCCCcHHHHHHHh--CCCCHH
Confidence            99999999999999875  556554

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.18  E-value=1.1e-10  Score=87.58  Aligned_cols=73  Identities=26%  Similarity=0.349  Sum_probs=64.6

Q ss_pred             CCCeEEEEEeccCCceEEEe-------------------------------------chhhhHHHHHHHHHhCCCCCCCc
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-------------------------------------KKRNRVHIEKEILKMLDHPFLPS  115 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-------------------------------------~~~~~~~~E~~~l~~~~h~~iv~  115 (156)
                      .++|++.+.||+|+||.||+                                     .....+.+|+.+++.++|+||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            45699999999999999994                                     01235788999999999999999


Q ss_pred             eeEEEEeCCeEEEEEeccCCCCHHHHHHhc
Q 043174          116 LFAEFEASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       116 l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +++++...+.++++|||+++|+|.+++...
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  113 (296)
T cd05095          84 LLAVCITSDPLCMITEYMENGDLNQFLSRH  113 (296)
T ss_pred             EEEEEecCCccEEEEEeCCCCcHHHHHHhc
Confidence            999999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>PHA02988 hypothetical protein; Provisional

Probab=99.18  E-value=6.1e-11  Score=88.72  Aligned_cols=71  Identities=18%  Similarity=0.216  Sum_probs=59.8

Q ss_pred             EEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe----CCeEEEEEeccC
Q 043174           80 RRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA----SHYSRLVIEYCP  134 (156)
Q Consensus        80 ~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~----~~~~~lv~E~~~  134 (156)
                      ..||+|++|.||+                     ...+.+.+|+.+|..++||||+++++++.+    ...++++|||++
T Consensus        26 ~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~  105 (283)
T PHA02988         26 VLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCT  105 (283)
T ss_pred             eEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCC
Confidence            5689999999998                     113567799999999999999999998877    457899999999


Q ss_pred             CCCHHHHHHhcCCCCCCC
Q 043174          135 GGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       135 ~g~L~~~l~~~~~~~~~e  152 (156)
                      +|+|.+++.+.  +.+++
T Consensus       106 ~g~L~~~l~~~--~~~~~  121 (283)
T PHA02988        106 RGYLREVLDKE--KDLSF  121 (283)
T ss_pred             CCcHHHHHhhC--CCCCh
Confidence            99999999875  45554

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.18  E-value=1.3e-10  Score=86.82  Aligned_cols=77  Identities=23%  Similarity=0.314  Sum_probs=66.6

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFE  121 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~  121 (156)
                      ..+..++|++.+.||+|+||.||+                          +....+.+|+.++..+ +|+||+++++.+.
T Consensus         7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   86 (293)
T cd05053           7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT   86 (293)
T ss_pred             cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence            345567899999999999999997                          1123477899999999 7999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhc
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ..+.++++|||+++|+|..+++.+
T Consensus        87 ~~~~~~li~e~~~~~~L~~~l~~~  110 (293)
T cd05053          87 QEGPLYVVVEYAAHGNLRDFLRAR  110 (293)
T ss_pred             CCCCeEEEEEeCCCCcHHHHHHhc
Confidence            999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.18  E-value=1.7e-10  Score=84.72  Aligned_cols=71  Identities=30%  Similarity=0.501  Sum_probs=64.4

Q ss_pred             CCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ++|++.+.||+|+||.||+                       +..+.+.+|+.+++.++|+||+++++.+.+.+..+++|
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            6799999999999999998                       12346788999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHh
Q 043174          131 EYCPGGDLLTVSQR  144 (156)
Q Consensus       131 E~~~~g~L~~~l~~  144 (156)
                      ||+++|+|..++..
T Consensus        82 e~~~~~~L~~~l~~   95 (267)
T cd08224          82 ELADAGDLSRMIKH   95 (267)
T ss_pred             ecCCCCCHHHHHHH
Confidence            99999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.18  E-value=2.1e-12  Score=96.25  Aligned_cols=79  Identities=19%  Similarity=0.348  Sum_probs=70.0

Q ss_pred             CeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCC
Q 043174           75 QFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGG  136 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g  136 (156)
                      -|.++.+||+|+||.|++                  ..++.+..||.||.++.++++|++||.|-....+++|||||..|
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAG  113 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAG  113 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCC
Confidence            377788999999999998                  34678899999999999999999999999889999999999999


Q ss_pred             CHHHHHHhcCCCCCCCCC
Q 043174          137 DLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       137 ~L~~~l~~~~~~~~~e~~  154 (156)
                      +.-++++.+ ++.+.|++
T Consensus       114 SiSDI~R~R-~K~L~E~E  130 (502)
T KOG0574|consen  114 SISDIMRAR-RKPLSEQE  130 (502)
T ss_pred             cHHHHHHHh-cCCccHHH
Confidence            999999876 57777753

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.18  E-value=6.9e-11  Score=89.76  Aligned_cols=73  Identities=33%  Similarity=0.593  Sum_probs=58.3

Q ss_pred             EEeccCCceEEEe------------c-----------hhhhHHHHHH-HHHhCCCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           80 RRLGSGIIRSVYI------------K-----------KRNRVHIEKE-ILKMLDHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        80 ~~lG~G~~g~V~~------------~-----------~~~~~~~E~~-~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      +.||+|+||.||+            |           ....+..|+. +++.++||||+++++.+.+.+.+|+||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3699999999998            1           1123444544 56788999999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCCCCCC
Q 043174          136 GDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       136 g~L~~~l~~~~~~~~~e~~  154 (156)
                      |+|..++.+.  +.+++..
T Consensus        81 ~~L~~~l~~~--~~~~~~~   97 (321)
T cd05603          81 GELFFHLQRE--RCFLEPR   97 (321)
T ss_pred             CCHHHHHHHc--CCCCHHH
Confidence            9999999875  5666543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.18  E-value=6.7e-11  Score=87.81  Aligned_cols=70  Identities=19%  Similarity=0.442  Sum_probs=62.2

Q ss_pred             CeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           75 QFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      -|++.+.||+|+||.||+                     .....+.+|+.++..++||||+++++.+.+....++||||+
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL   84 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence            367788999999999998                     12245788999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHh
Q 043174          134 PGGDLLTVSQR  144 (156)
Q Consensus       134 ~~g~L~~~l~~  144 (156)
                      ++|+|.+++..
T Consensus        85 ~~~~l~~~i~~   95 (277)
T cd06641          85 GGGSALDLLEP   95 (277)
T ss_pred             CCCcHHHHHhc
Confidence            99999999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.18  E-value=1.1e-10  Score=85.67  Aligned_cols=75  Identities=20%  Similarity=0.357  Sum_probs=64.7

Q ss_pred             ccCCCeEEEEEeccCCceEEEe----------------chhhhHHHHHHHHHhCCCCCCCceeEEE-EeCCeEEEEEecc
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI----------------KKRNRVHIEKEILKMLDHPFLPSLFAEF-EASHYSRLVIEYC  133 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~----------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~-~~~~~~~lv~E~~  133 (156)
                      +...+|++.+.||+|+||.||+                ...+.+.+|+.+++.++|+|++++++++ ...+.++++|||+
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~   82 (256)
T cd05082           3 LNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   82 (256)
T ss_pred             ccHHhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence            4567899999999999999997                2234578999999999999999999865 4567799999999


Q ss_pred             CCCCHHHHHHhc
Q 043174          134 PGGDLLTVSQRQ  145 (156)
Q Consensus       134 ~~g~L~~~l~~~  145 (156)
                      ++|+|.+++++.
T Consensus        83 ~~~~L~~~~~~~   94 (256)
T cd05082          83 AKGSLVDYLRSR   94 (256)
T ss_pred             CCCcHHHHHHhc
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.18  E-value=9.3e-12  Score=93.56  Aligned_cols=83  Identities=20%  Similarity=0.265  Sum_probs=66.7

Q ss_pred             ccCCCeEEEEEeccCCceEEEe------------chh------h----hHHHHHHHHHhCCCCCCCceeEEEEe--CCeE
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI------------KKR------N----RVHIEKEILKMLDHPFLPSLFAEFEA--SHYS  126 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~------------~~~------~----~~~~E~~~l~~~~h~~iv~l~~~~~~--~~~~  126 (156)
                      ...+.|+++..|++|+||.||+            |.+      .    ...+||.+|.+++|||||.+..++..  -+.+
T Consensus        73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i  152 (419)
T KOG0663|consen   73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI  152 (419)
T ss_pred             ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence            3457789999999999999999            111      1    35899999999999999999988765  3569


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |+|||||+. ||..++..- ...|.+.++
T Consensus       153 y~VMe~~Eh-DLksl~d~m-~q~F~~~ev  179 (419)
T KOG0663|consen  153 YIVMEYVEH-DLKSLMETM-KQPFLPGEV  179 (419)
T ss_pred             eeeHHHHHh-hHHHHHHhc-cCCCchHHH
Confidence            999999986 999999886 246665544

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.18  E-value=1.2e-10  Score=86.66  Aligned_cols=73  Identities=29%  Similarity=0.361  Sum_probs=62.0

Q ss_pred             CCCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe--CCeE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA--SHYS  126 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~--~~~~  126 (156)
                      ..+|++.+.||+|+||.||+                        ...+.+.+|++++..++||||+++++++..  ...+
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   82 (284)
T cd05081           3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   82 (284)
T ss_pred             cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence            35789999999999999986                        123467899999999999999999997654  3568


Q ss_pred             EEEEeccCCCCHHHHHHhc
Q 043174          127 RLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~  145 (156)
                      +++|||+++|+|.+++.+.
T Consensus        83 ~lv~e~~~~~~L~~~l~~~  101 (284)
T cd05081          83 RLVMEYLPYGSLRDYLQKH  101 (284)
T ss_pred             EEEEEecCCCCHHHHHHhc
Confidence            9999999999999999764

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.17  E-value=9.4e-11  Score=87.43  Aligned_cols=74  Identities=20%  Similarity=0.350  Sum_probs=65.3

Q ss_pred             cCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      ..++|++.+.||+|+||.||+                          .....+.+|+.++..++||||+++++++.++..
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~   82 (288)
T cd05050           3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP   82 (288)
T ss_pred             ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence            457799999999999999996                          112357889999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhc
Q 043174          126 SRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ++++|||+++|+|.+++...
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~  102 (288)
T cd05050          83 MCLLFEYMAYGDLNEFLRHR  102 (288)
T ss_pred             cEEEEecCCCCCHHHHHHHc
Confidence            99999999999999999864

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.17  E-value=1.3e-10  Score=85.08  Aligned_cols=80  Identities=26%  Similarity=0.360  Sum_probs=67.8

Q ss_pred             CCCeEEEEEeccCCceEEEe-----------c-------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccC
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-----------K-------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCP  134 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-----------~-------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~  134 (156)
                      ..+|.+.+.||+|+||.||+           +       ....+.+|+++++.+.||||+++++.+......+++|||++
T Consensus         3 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           3 PSELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             hhHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            45789999999999999997           1       12467889999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCCCCC
Q 043174          135 GGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       135 ~g~L~~~l~~~~~~~~~e~  153 (156)
                      +|+|.+++... .+.++++
T Consensus        83 ~~~L~~~~~~~-~~~~~~~  100 (256)
T cd05112          83 HGCLSDYLRAQ-RGKFSQE  100 (256)
T ss_pred             CCcHHHHHHhC-ccCCCHH
Confidence            99999999764 2345543

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.17  E-value=7.3e-11  Score=89.61  Aligned_cols=73  Identities=33%  Similarity=0.566  Sum_probs=58.9

Q ss_pred             EEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           80 RRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        80 ~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      +.||+|+||.||+            |           ..+....|..++..+ +||||+++++.+...+.+|+||||++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3689999999998            1           122345566676654 899999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCCCCCC
Q 043174          136 GDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       136 g~L~~~l~~~~~~~~~e~~  154 (156)
                      |+|..+++..  +.+++..
T Consensus        81 g~L~~~~~~~--~~~~~~~   97 (316)
T cd05592          81 GDLMFHIQSS--GRFDEAR   97 (316)
T ss_pred             CcHHHHHHHc--CCCCHHH
Confidence            9999999875  5676653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.17  E-value=1.2e-10  Score=87.03  Aligned_cols=74  Identities=26%  Similarity=0.396  Sum_probs=65.7

Q ss_pred             cCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      ..++|.+.+.||+|+||.||+                         .....+.+|+.++..++||||+++++++...+.+
T Consensus         3 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   82 (288)
T cd05093           3 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL   82 (288)
T ss_pred             chHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence            456799999999999999986                         1123578899999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhc
Q 043174          127 RLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~  145 (156)
                      +++|||+++|+|.+++..+
T Consensus        83 ~lv~e~~~~~~L~~~i~~~  101 (288)
T cd05093          83 IMVFEYMKHGDLNKFLRAH  101 (288)
T ss_pred             EEEEEcCCCCCHHHHHHHc
Confidence            9999999999999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.17  E-value=4.2e-11  Score=87.85  Aligned_cols=79  Identities=23%  Similarity=0.364  Sum_probs=66.3

Q ss_pred             CCCeEEEEEeccCCceEEEe-----------c-------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccC
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-----------K-------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCP  134 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-----------~-------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~  134 (156)
                      ..+|.+.+.||+|+||.||+           |       ....+.+|+.++..++|+||+++++.+...+..|++|||++
T Consensus         3 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05059           3 PSELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA   82 (256)
T ss_pred             hHHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence            34688899999999999997           1       12357789999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCCCC
Q 043174          135 GGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       135 ~g~L~~~l~~~~~~~~~e  152 (156)
                      +++|.+++..+. +.+++
T Consensus        83 ~~~L~~~l~~~~-~~~~~   99 (256)
T cd05059          83 NGCLLNYLRERK-GKLGT   99 (256)
T ss_pred             CCCHHHHHHhcc-cCCCH
Confidence            999999998652 34444

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.17  E-value=9.3e-11  Score=89.07  Aligned_cols=72  Identities=33%  Similarity=0.650  Sum_probs=58.9

Q ss_pred             EEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           80 RRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        80 ~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      +.||+|+||.||+            |           ..+....|+.++..+ +||||+++++++.+.+.++++|||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            3689999999998            1           122355677777764 899999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCCCCC
Q 043174          136 GDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       136 g~L~~~l~~~~~~~~~e~  153 (156)
                      |+|..+++..  ..+++.
T Consensus        81 g~L~~~l~~~--~~~~~~   96 (316)
T cd05619          81 GDLMFHIQSC--HKFDLP   96 (316)
T ss_pred             CcHHHHHHHc--CCCCHH
Confidence            9999999874  455544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.17  E-value=8.6e-11  Score=89.70  Aligned_cols=78  Identities=21%  Similarity=0.318  Sum_probs=67.3

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe----------------------------chhhhHHHHHHHHHhC-CCCCCCceeE
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI----------------------------KKRNRVHIEKEILKML-DHPFLPSLFA  118 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~----------------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~  118 (156)
                      .+.+...+|.+.+.||+|+||.||.                            +..+.+.+|+.++..+ +||||+++++
T Consensus         6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~   85 (334)
T cd05100           6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLG   85 (334)
T ss_pred             ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeE
Confidence            3455566799999999999999995                            1124578899999999 7999999999


Q ss_pred             EEEeCCeEEEEEeccCCCCHHHHHHhc
Q 043174          119 EFEASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       119 ~~~~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      .+...+.++++|||+++|+|.++|.+.
T Consensus        86 ~~~~~~~~~lv~e~~~~g~L~~~l~~~  112 (334)
T cd05100          86 ACTQDGPLYVLVEYASKGNLREYLRAR  112 (334)
T ss_pred             EEccCCceEEEEecCCCCcHHHHHHhc
Confidence            999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.17  E-value=1e-10  Score=86.19  Aligned_cols=81  Identities=23%  Similarity=0.353  Sum_probs=65.5

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-----------c-------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-----------K-------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-----------~-------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      +..++|.+.+.||+|+||.||+           |       ....+.+|+.++..++|+||+++++.+. ....+++|||
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~   81 (262)
T cd05071           3 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEY   81 (262)
T ss_pred             CChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEc
Confidence            3456799999999999999998           1       1235788999999999999999999875 4568999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e  152 (156)
                      +++|+|.+++++.....+++
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~  101 (262)
T cd05071          82 MSKGSLLDFLKGEMGKYLRL  101 (262)
T ss_pred             CCCCcHHHHHhhccccCCCH
Confidence            99999999998642233443

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.17  E-value=1e-10  Score=85.41  Aligned_cols=78  Identities=31%  Similarity=0.657  Sum_probs=66.2

Q ss_pred             CeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           75 QFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      +|.+.+.||+|+||.||+                      +..+.+.+|+.+++.++|+||+++++.+.+...+++++||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            478899999999999998                      1234577899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e  152 (156)
                      +++++|.+++.+.....+++
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~  100 (257)
T cd08225          81 CDGGDLMKRINRQRGVLFSE  100 (257)
T ss_pred             CCCCcHHHHHHhccCCCCCH
Confidence            99999999997753223444

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.17  E-value=5.3e-11  Score=95.31  Aligned_cols=70  Identities=21%  Similarity=0.415  Sum_probs=63.1

Q ss_pred             eEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe--EEEE
Q 043174           76 FQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY--SRLV  129 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~--~~lv  129 (156)
                      .+...+||+|+|.+||+                        +..+.+..|+++|+.|+|||||++|..|.+...  +-+|
T Consensus        42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~i  121 (632)
T KOG0584|consen   42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFI  121 (632)
T ss_pred             eehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeee
Confidence            35567899999999999                        345789999999999999999999999988655  8899


Q ss_pred             EeccCCCCHHHHHHhc
Q 043174          130 IEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~  145 (156)
                      +|++..|+|..|++++
T Consensus       122 TEL~TSGtLr~Y~kk~  137 (632)
T KOG0584|consen  122 TELFTSGTLREYRKKH  137 (632)
T ss_pred             eecccCCcHHHHHHHh
Confidence            9999999999999997

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.17  E-value=8.5e-11  Score=87.82  Aligned_cols=71  Identities=23%  Similarity=0.331  Sum_probs=62.7

Q ss_pred             CeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           75 QFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      +|++.+.||+|+||.||+                          ...+.+.+|+.++..+.||||+++++.+...+..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            477889999999999997                          112357889999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhc
Q 043174          129 VIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~  145 (156)
                      ++||+.+|+|.+++...
T Consensus        81 v~e~~~~~~L~~~l~~~   97 (290)
T cd05045          81 IVEYAKYGSLRSFLRES   97 (290)
T ss_pred             EEEecCCCCHHHHHHhc
Confidence            99999999999999764

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.17  E-value=2.4e-10  Score=85.89  Aligned_cols=72  Identities=21%  Similarity=0.399  Sum_probs=64.8

Q ss_pred             CCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           73 LDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      ..+|.+.+.||+|+||.||+                    ...+.+.+|+.+++.++|+||+++++.+.....+|+||||
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   97 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   97 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence            47799999999999999998                    1234578899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHh
Q 043174          133 CPGGDLLTVSQR  144 (156)
Q Consensus       133 ~~~g~L~~~l~~  144 (156)
                      +++++|.+++.+
T Consensus        98 ~~~~~L~~~~~~  109 (297)
T cd06656          98 LAGGSLTDVVTE  109 (297)
T ss_pred             cCCCCHHHHHHh
Confidence            999999999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.16  E-value=1.3e-10  Score=86.48  Aligned_cols=74  Identities=23%  Similarity=0.367  Sum_probs=65.4

Q ss_pred             cCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      ...+|.+.+.||+|+||.||+                         ...+.+.+|+.++..++|+||+++++.+.+....
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   82 (280)
T cd05092           3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPL   82 (280)
T ss_pred             ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCce
Confidence            346788899999999999986                         1234688899999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhc
Q 043174          127 RLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~  145 (156)
                      +++|||+++|+|.+++...
T Consensus        83 ~lv~e~~~~~~L~~~i~~~  101 (280)
T cd05092          83 LMVFEYMRHGDLNRFLRSH  101 (280)
T ss_pred             EEEEecCCCCCHHHHHHhc
Confidence            9999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.16  E-value=4e-10  Score=84.65  Aligned_cols=72  Identities=21%  Similarity=0.399  Sum_probs=64.9

Q ss_pred             CCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           73 LDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      ..+|.+.+.||+|+||.||+                    ...+.+.+|+.+++.+.|+||+++++.+.+....|+||||
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~   98 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence            46799999999999999998                    1234678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHh
Q 043174          133 CPGGDLLTVSQR  144 (156)
Q Consensus       133 ~~~g~L~~~l~~  144 (156)
                      +++|+|.+++.+
T Consensus        99 ~~~~~L~~~~~~  110 (296)
T cd06654          99 LAGGSLTDVVTE  110 (296)
T ss_pred             cCCCCHHHHHHh
Confidence            999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.16  E-value=1.5e-10  Score=84.96  Aligned_cols=72  Identities=24%  Similarity=0.472  Sum_probs=65.0

Q ss_pred             CCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           74 DQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      ++|++.+.||.|+||.||+                     ...+.+.+|+.+++.++|+||+++++.+..+...+++||+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            4689999999999999998                     1235678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhc
Q 043174          133 CPGGDLLTVSQRQ  145 (156)
Q Consensus       133 ~~~g~L~~~l~~~  145 (156)
                      +++++|.++++..
T Consensus        81 ~~~~~l~~~~~~~   93 (267)
T cd06610          81 LSGGSLLDIMKSS   93 (267)
T ss_pred             cCCCcHHHHHHHh
Confidence            9999999999864

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.16  E-value=8.2e-11  Score=87.02  Aligned_cols=65  Identities=25%  Similarity=0.428  Sum_probs=57.9

Q ss_pred             EeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCC
Q 043174           81 RLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGD  137 (156)
Q Consensus        81 ~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~  137 (156)
                      .||+|+||.||+                       +..+.+.+|+.++..++||||+++++.+.+....|++|||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            589999999997                       123468889999999999999999999999999999999999999


Q ss_pred             HHHHHHhc
Q 043174          138 LLTVSQRQ  145 (156)
Q Consensus       138 L~~~l~~~  145 (156)
                      |.+++.+.
T Consensus        82 L~~~l~~~   89 (268)
T cd05086          82 LKSYLSQE   89 (268)
T ss_pred             HHHHHHhh
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.16  E-value=1e-10  Score=85.40  Aligned_cols=75  Identities=24%  Similarity=0.354  Sum_probs=64.9

Q ss_pred             eEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           76 FQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      |+..+.||+|+||.||+                         +..+.+.+|+.+++.++|+||+++++.+.+...+++++
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL   81 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence            56678899999999998                         12346888999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      ||+++++|.+++.+.  +.+++
T Consensus        82 e~~~~~~L~~~~~~~--~~~~~  101 (258)
T cd06632          82 ELVPGGSLAKLLKKY--GSFPE  101 (258)
T ss_pred             EecCCCcHHHHHHhc--CCCCH
Confidence            999999999999875  44554

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.16  E-value=1.6e-10  Score=86.68  Aligned_cols=72  Identities=26%  Similarity=0.415  Sum_probs=63.5

Q ss_pred             CCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      ++|.+.+.||+|+||.||+                       ...+.+.+|+.++.++ +||||+++++++...+.++++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            5789999999999999997                       0123577899999998 799999999999999999999


Q ss_pred             EeccCCCCHHHHHHhc
Q 043174          130 IEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~  145 (156)
                      |||+++|+|.+++...
T Consensus        82 ~e~~~~~~L~~~l~~~   97 (297)
T cd05089          82 IEYAPYGNLLDFLRKS   97 (297)
T ss_pred             EEecCCCcHHHHHHhc
Confidence            9999999999999764

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.16  E-value=7.2e-11  Score=86.28  Aligned_cols=73  Identities=27%  Similarity=0.438  Sum_probs=61.1

Q ss_pred             EEeccCCceEEEe------------c---------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCH
Q 043174           80 RRLGSGIIRSVYI------------K---------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDL  138 (156)
Q Consensus        80 ~~lG~G~~g~V~~------------~---------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L  138 (156)
                      +.||+|+||.||+            |         ....+.+|+++++.++||||+++++++.+...+++||||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            3689999999997            1         124588899999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCCC
Q 043174          139 LTVSQRQRRLRFSIP  153 (156)
Q Consensus       139 ~~~l~~~~~~~~~e~  153 (156)
                      .+++++. ...+++.
T Consensus        81 ~~~~~~~-~~~~~~~   94 (252)
T cd05084          81 LTFLRTE-GPRLKVK   94 (252)
T ss_pred             HHHHHhC-CCCCCHH
Confidence            9999764 2335543

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.16  E-value=5.9e-11  Score=87.95  Aligned_cols=74  Identities=24%  Similarity=0.385  Sum_probs=65.7

Q ss_pred             cCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      ..++|.+.+.||+|+||.||+                          +..+.+.+|++++..+.|+||+++++.+.....
T Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   82 (280)
T cd05049           3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDP   82 (280)
T ss_pred             ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence            356788899999999999996                          123568889999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhc
Q 043174          126 SRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~  145 (156)
                      .+++|||+++|+|.++|...
T Consensus        83 ~~lv~e~~~~~~L~~~i~~~  102 (280)
T cd05049          83 PIMVFEYMEHGDLNKFLRSH  102 (280)
T ss_pred             eEEEEecCCCCCHHHHHHhc
Confidence            99999999999999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.16  E-value=1.1e-10  Score=88.88  Aligned_cols=73  Identities=30%  Similarity=0.590  Sum_probs=58.2

Q ss_pred             EEeccCCceEEEe------------c-----------hhhhHHHHHH-HHHhCCCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           80 RRLGSGIIRSVYI------------K-----------KRNRVHIEKE-ILKMLDHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        80 ~~lG~G~~g~V~~------------~-----------~~~~~~~E~~-~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      +.||+|+||.||+            |           ....+..|.. ++..++||||+++++.+.+.+.+|+||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            3689999999998            1           1123444544 45678999999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCCCCCC
Q 043174          136 GDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       136 g~L~~~l~~~~~~~~~e~~  154 (156)
                      |+|..++++.  +.++|..
T Consensus        81 g~L~~~l~~~--~~~~~~~   97 (323)
T cd05575          81 GELFFHLQRE--RSFPEPR   97 (323)
T ss_pred             CCHHHHHHhc--CCCCHHH
Confidence            9999999875  5666653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.16  E-value=1e-10  Score=86.09  Aligned_cols=76  Identities=24%  Similarity=0.328  Sum_probs=65.3

Q ss_pred             eEEEEEeccCCceEEEe------------c-----------------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           76 FQLFRRLGSGIIRSVYI------------K-----------------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~------------~-----------------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      |.+.+.||+|+||.||+            +                 ..+.+.+|+.++..++||||+++++++......
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            56778999999999998            1                 124578899999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +++|||+++++|.++++..  +.+++.
T Consensus        82 ~lv~e~~~~~~L~~~l~~~--~~l~~~  106 (267)
T cd06628          82 NIFLEYVPGGSVAALLNNY--GAFEET  106 (267)
T ss_pred             EEEEEecCCCCHHHHHHhc--cCccHH
Confidence            9999999999999999875  556554

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.16  E-value=1.1e-10  Score=86.09  Aligned_cols=65  Identities=26%  Similarity=0.386  Sum_probs=57.4

Q ss_pred             EeccCCceEEEe--------------c---------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCC
Q 043174           81 RLGSGIIRSVYI--------------K---------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGD  137 (156)
Q Consensus        81 ~lG~G~~g~V~~--------------~---------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~  137 (156)
                      .||+|+||.||+              +         ....+.+|+.+++.++|+||+++++.+.+...++++|||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            589999999997              1         12346789999999999999999999999999999999999999


Q ss_pred             HHHHHHhc
Q 043174          138 LLTVSQRQ  145 (156)
Q Consensus       138 L~~~l~~~  145 (156)
                      |.+++...
T Consensus        82 L~~~l~~~   89 (269)
T cd05042          82 LKNYLRSN   89 (269)
T ss_pred             HHHHHHhc
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.16  E-value=1.6e-10  Score=86.21  Aligned_cols=79  Identities=25%  Similarity=0.308  Sum_probs=66.0

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c---------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K---------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~---------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      .++|.+.+.||+|+||.||+            |         ....+.+|+.+++.++|+||+++++++.+....++|||
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE   83 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence            57899999999999999998            1         11245679999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |+++ +|.+++.+. ...++++
T Consensus        84 ~~~~-~L~~~~~~~-~~~~~~~  103 (291)
T cd07844          84 YLDT-DLKQYMDDC-GGGLSMH  103 (291)
T ss_pred             cCCC-CHHHHHHhC-CCCCCHH
Confidence            9984 999998765 2344443

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.16  E-value=1e-10  Score=88.96  Aligned_cols=73  Identities=30%  Similarity=0.555  Sum_probs=57.7

Q ss_pred             EEeccCCceEEEe------------c-----------hhhhHHHHHH-HHHhCCCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           80 RRLGSGIIRSVYI------------K-----------KRNRVHIEKE-ILKMLDHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        80 ~~lG~G~~g~V~~------------~-----------~~~~~~~E~~-~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      +.||+|+||.||+            |           ....+..|.. ++..++||||+++++.+.+.+.+|++|||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            3699999999998            1           1122334443 45678999999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCCCCCC
Q 043174          136 GDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       136 g~L~~~l~~~~~~~~~e~~  154 (156)
                      |+|.+++...  +.+.+..
T Consensus        81 ~~L~~~~~~~--~~~~~~~   97 (325)
T cd05602          81 GELFYHLQRE--RCFLEPR   97 (325)
T ss_pred             CcHHHHHHhc--CCCCHHH
Confidence            9999999875  5666554

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.16  E-value=8.8e-11  Score=86.76  Aligned_cols=65  Identities=25%  Similarity=0.366  Sum_probs=57.1

Q ss_pred             EeccCCceEEEe--------------c---------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCC
Q 043174           81 RLGSGIIRSVYI--------------K---------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGD  137 (156)
Q Consensus        81 ~lG~G~~g~V~~--------------~---------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~  137 (156)
                      .||+|+||.||+              +         ....+.+|+.+++.++||||+++++.+.+...++++|||+++|+
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD   81 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence            589999999997              1         11357789999999999999999999999999999999999999


Q ss_pred             HHHHHHhc
Q 043174          138 LLTVSQRQ  145 (156)
Q Consensus       138 L~~~l~~~  145 (156)
                      |.+++...
T Consensus        82 L~~~l~~~   89 (269)
T cd05087          82 LKGYLRSC   89 (269)
T ss_pred             HHHHHHHh
Confidence            99999764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.15  E-value=1.7e-10  Score=86.30  Aligned_cols=74  Identities=24%  Similarity=0.371  Sum_probs=65.6

Q ss_pred             cCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      ...+|.+.+.||+|+||.||+                         ...+.+.+|+.++..++|+||+++++.+......
T Consensus         3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   82 (291)
T cd05094           3 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPL   82 (291)
T ss_pred             chHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCce
Confidence            456789999999999999996                         1224688999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhc
Q 043174          127 RLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~  145 (156)
                      ++||||+++|+|.+++..+
T Consensus        83 ~lv~e~~~~~~L~~~i~~~  101 (291)
T cd05094          83 IMVFEYMKHGDLNKFLRAH  101 (291)
T ss_pred             EEEEecCCCCcHHHHHHhc
Confidence            9999999999999999764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.15  E-value=1.3e-10  Score=86.51  Aligned_cols=64  Identities=33%  Similarity=0.419  Sum_probs=55.4

Q ss_pred             eccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCH
Q 043174           82 LGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDL  138 (156)
Q Consensus        82 lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L  138 (156)
                      ||+|+||.||+            +           ....+..|++++..++||||+++++.+.++..+|++|||++||+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            69999999998            1           112345699999999999999999999999999999999999999


Q ss_pred             HHHHHhc
Q 043174          139 LTVSQRQ  145 (156)
Q Consensus       139 ~~~l~~~  145 (156)
                      .+++...
T Consensus        81 ~~~~~~~   87 (277)
T cd05607          81 KYHIYNV   87 (277)
T ss_pred             HHHHHhc
Confidence            9988664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.15  E-value=1.3e-10  Score=87.85  Aligned_cols=76  Identities=21%  Similarity=0.308  Sum_probs=65.6

Q ss_pred             CccCCCeEEEEEeccCCceEEEe----------------------------chhhhHHHHHHHHHhC-CCCCCCceeEEE
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI----------------------------KKRNRVHIEKEILKML-DHPFLPSLFAEF  120 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~----------------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~  120 (156)
                      .+..++|.+.+.||+|+||.||+                            +....+..|+.++..+ +||||+++++++
T Consensus         8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~   87 (314)
T cd05099           8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVC   87 (314)
T ss_pred             cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence            44567899999999999999985                            1123467899999999 699999999999


Q ss_pred             EeCCeEEEEEeccCCCCHHHHHHhc
Q 043174          121 EASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       121 ~~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      .+...++++|||+++|+|.++|...
T Consensus        88 ~~~~~~~lv~e~~~~g~L~~~i~~~  112 (314)
T cd05099          88 TQEGPLYVIVEYAAKGNLREFLRAR  112 (314)
T ss_pred             ccCCceEEEEecCCCCcHHHHHHhc
Confidence            9999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.15  E-value=1.1e-10  Score=88.82  Aligned_cols=73  Identities=29%  Similarity=0.579  Sum_probs=58.3

Q ss_pred             EEeccCCceEEEe------------c-----------hhhhHHHHHH-HHHhCCCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           80 RRLGSGIIRSVYI------------K-----------KRNRVHIEKE-ILKMLDHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        80 ~~lG~G~~g~V~~------------~-----------~~~~~~~E~~-~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      +.||+|+||.||+            |           ....+..|.. +++.++||||+++++.+...+.+|++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            3689999999998            1           1123445554 45678999999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCCCCCC
Q 043174          136 GDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       136 g~L~~~l~~~~~~~~~e~~  154 (156)
                      |+|..++.+.  +.+++..
T Consensus        81 ~~L~~~l~~~--~~~~~~~   97 (325)
T cd05604          81 GELFFHLQRE--RSFPEPR   97 (325)
T ss_pred             CCHHHHHHHc--CCCCHHH
Confidence            9999999875  6676654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.15  E-value=5.2e-11  Score=91.65  Aligned_cols=71  Identities=28%  Similarity=0.458  Sum_probs=61.8

Q ss_pred             CccCCCeEEEEEeccCCceEEEe------------c---------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI------------K---------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~------------~---------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      ....++|+.++.||+|+||.||+            |         ....+.+|+.++..++|+||+++++++...+.+++
T Consensus        70 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  149 (353)
T PLN00034         70 AKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQV  149 (353)
T ss_pred             CCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEE
Confidence            34457788899999999999998            1         12457899999999999999999999999999999


Q ss_pred             EEeccCCCCHHH
Q 043174          129 VIEYCPGGDLLT  140 (156)
Q Consensus       129 v~E~~~~g~L~~  140 (156)
                      +|||+++|+|..
T Consensus       150 v~e~~~~~~L~~  161 (353)
T PLN00034        150 LLEFMDGGSLEG  161 (353)
T ss_pred             EEecCCCCcccc
Confidence            999999999854

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.15  E-value=1.6e-10  Score=87.79  Aligned_cols=73  Identities=30%  Similarity=0.542  Sum_probs=59.7

Q ss_pred             EEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           80 RRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        80 ~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      +.||+|+||.||+            |           ..+....|+.++... +||||+++++.+.+.+.+|+||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            4699999999998            1           123456677777754 899999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCCCCCC
Q 043174          136 GDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       136 g~L~~~l~~~~~~~~~e~~  154 (156)
                      |+|..++...  +.+++..
T Consensus        81 g~L~~~i~~~--~~~~~~~   97 (316)
T cd05620          81 GDLMFHIQDK--GRFDLYR   97 (316)
T ss_pred             CcHHHHHHHc--CCCCHHH
Confidence            9999999875  5666543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.14  E-value=8.1e-11  Score=86.48  Aligned_cols=81  Identities=25%  Similarity=0.385  Sum_probs=66.3

Q ss_pred             ccCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      +..++|++.+.||+|+||.||+                  ...+.+.+|+.+++.++|+||+++++.+. ....+++|||
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~   81 (260)
T cd05070           3 IPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEY   81 (260)
T ss_pred             CchHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEe
Confidence            4457789999999999999997                  11346789999999999999999999875 4568999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e  152 (156)
                      +++++|.+++.......+++
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~  101 (260)
T cd05070          82 MSKGSLLDFLKDGEGRALKL  101 (260)
T ss_pred             cCCCcHHHHHHhcCCCCCCH
Confidence            99999999998643334544

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.14  E-value=2.4e-12  Score=103.74  Aligned_cols=81  Identities=23%  Similarity=0.426  Sum_probs=70.7

Q ss_pred             CCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           73 LDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      .+.|.++..||.|+||+||+                    ..++.+.-||+||..+.||+||+|++.|.-++.++++.||
T Consensus        31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF  110 (1187)
T KOG0579|consen   31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF  110 (1187)
T ss_pred             HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence            35688899999999999999                    3466789999999999999999999999889999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      |.||-...++-.. +..+.|++
T Consensus       111 C~GGAVDaimlEL-~r~LtE~Q  131 (1187)
T KOG0579|consen  111 CGGGAVDAIMLEL-GRVLTEDQ  131 (1187)
T ss_pred             cCCchHhHHHHHh-ccccchHH
Confidence            9999988887765 46677664

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.14  E-value=5.4e-11  Score=88.57  Aligned_cols=71  Identities=27%  Similarity=0.449  Sum_probs=63.2

Q ss_pred             CCeEEEEEeccCCceEEEe------------c---------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K---------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~---------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      ++|++++.||+|+||.||+            +         ....+.+|+.++..++|+||+++++.+...+.++++|||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY   80 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence            4678899999999999998            1         124577899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHh
Q 043174          133 CPGGDLLTVSQR  144 (156)
Q Consensus       133 ~~~g~L~~~l~~  144 (156)
                      +++++|..++..
T Consensus        81 ~~~~~l~~~~~~   92 (286)
T cd06622          81 MDAGSLDKLYAG   92 (286)
T ss_pred             cCCCCHHHHHHh
Confidence            999999999876

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.14  E-value=1.7e-10  Score=85.63  Aligned_cols=78  Identities=24%  Similarity=0.379  Sum_probs=65.4

Q ss_pred             CCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      ++|++.+.||+|+||.||+            |          ..+.+.+|+.+++.++|+||+++++.+.....++++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            4689999999999999999            1          11346789999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |++++.|..++...  ..+++.
T Consensus        81 ~~~~~~l~~~~~~~--~~~~~~  100 (286)
T cd07847          81 YCDHTVLNELEKNP--RGVPEH  100 (286)
T ss_pred             ccCccHHHHHHhCC--CCCCHH
Confidence            99998887777653  456554

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.14  E-value=1.5e-10  Score=84.70  Aligned_cols=73  Identities=19%  Similarity=0.247  Sum_probs=63.2

Q ss_pred             cCCCeEEEEEeccCCceEEEe----------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI----------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~----------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      ..++|.+.+.||+|+||.||+                ...+.+.+|+.++..++||||+++++.+... ..+++|||+++
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~   82 (254)
T cd05083           4 NLQKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSK   82 (254)
T ss_pred             cHHHceeeeeeccCCCCceEecccCCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCC
Confidence            456799999999999999998                1234678899999999999999999988654 47999999999


Q ss_pred             CCHHHHHHhc
Q 043174          136 GDLLTVSQRQ  145 (156)
Q Consensus       136 g~L~~~l~~~  145 (156)
                      |+|.++++..
T Consensus        83 ~~L~~~l~~~   92 (254)
T cd05083          83 GNLVNFLRTR   92 (254)
T ss_pred             CCHHHHHHhc
Confidence            9999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.14  E-value=1.6e-10  Score=85.80  Aligned_cols=80  Identities=21%  Similarity=0.333  Sum_probs=66.2

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      +...+|++.+.||+|+||.||+                         .....+.+|+.++..+.||||+++++++.. ..
T Consensus         4 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~   82 (279)
T cd05057           4 LKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQ   82 (279)
T ss_pred             cCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cc
Confidence            3457789999999999999987                         112457789999999999999999998887 78


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      .+++|||+++|+|.+++.+. ...+++
T Consensus        83 ~~~v~e~~~~g~L~~~l~~~-~~~~~~  108 (279)
T cd05057          83 VQLITQLMPLGCLLDYVRNH-KDNIGS  108 (279)
T ss_pred             eEEEEecCCCCcHHHHHHhc-cCCCCH
Confidence            99999999999999999875 233444

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.13  E-value=2.4e-10  Score=85.29  Aligned_cols=77  Identities=29%  Similarity=0.609  Sum_probs=65.1

Q ss_pred             CeEEEEEeccCCceEEEe---------------c------------hhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeE
Q 043174           75 QFQLFRRLGSGIIRSVYI---------------K------------KRNRVHIEKEILKML-DHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~---------------~------------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~  126 (156)
                      +|++.+.||+|+||.||.               +            ..+.+.+|+.++..+ +|+||+.+++.+..+..+
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            478899999999999996               1            123467799999999 699999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |++|||+++++|.+++...  ..+++.
T Consensus        81 ~lv~e~~~~~~L~~~l~~~--~~l~~~  105 (290)
T cd05613          81 HLILDYINGGELFTHLSQR--ERFKEQ  105 (290)
T ss_pred             EEEEecCCCCcHHHHHHHc--CCCCHH
Confidence            9999999999999999875  555543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.13  E-value=1.5e-10  Score=86.82  Aligned_cols=72  Identities=22%  Similarity=0.421  Sum_probs=64.6

Q ss_pred             CCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           73 LDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      .+.|.+.+.||+|+||.||+                    ...+.+.+|+.+++.++||||+++++.+...+..|+|+||
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~   97 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY   97 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence            36789999999999999998                    1234578899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHh
Q 043174          133 CPGGDLLTVSQR  144 (156)
Q Consensus       133 ~~~g~L~~~l~~  144 (156)
                      +++|+|.+++.+
T Consensus        98 ~~~~~L~~~~~~  109 (293)
T cd06647          98 LAGGSLTDVVTE  109 (293)
T ss_pred             CCCCcHHHHHhh
Confidence            999999999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.13  E-value=1e-11  Score=100.87  Aligned_cols=72  Identities=25%  Similarity=0.331  Sum_probs=64.0

Q ss_pred             CCCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      .+++.+.++||+|.||.|++                        .....|.+|+.+|.+++|+|+++|||++.+ ..+.+
T Consensus       109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mM  187 (1039)
T KOG0199|consen  109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMM  187 (1039)
T ss_pred             HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhH
Confidence            44566778899999999999                        245679999999999999999999999987 78999


Q ss_pred             EEeccCCCCHHHHHHhc
Q 043174          129 VIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~  145 (156)
                      |+|+++.|+|.+.|++.
T Consensus       188 V~ELaplGSLldrLrka  204 (1039)
T KOG0199|consen  188 VFELAPLGSLLDRLRKA  204 (1039)
T ss_pred             HhhhcccchHHHHHhhc
Confidence            99999999999999873

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.13  E-value=1.1e-10  Score=86.66  Aligned_cols=71  Identities=20%  Similarity=0.458  Sum_probs=62.8

Q ss_pred             CCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           74 DQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      ..|+.++.||.|+||.||.                     .....+.+|+.++..+.|+||+++++.+.+....++||||
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence            3467788899999999999                     1234578899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHh
Q 043174          133 CPGGDLLTVSQR  144 (156)
Q Consensus       133 ~~~g~L~~~l~~  144 (156)
                      +++|+|.+++..
T Consensus        84 ~~~~~L~~~i~~   95 (277)
T cd06640          84 LGGGSALDLLRA   95 (277)
T ss_pred             CCCCcHHHHHhc
Confidence            999999999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.13  E-value=6.1e-12  Score=99.03  Aligned_cols=88  Identities=28%  Similarity=0.465  Sum_probs=79.8

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS  123 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~  123 (156)
                      ......+.+++++..||-|+||+|-+                       ++.+++..|..||..+++|+||++|..|.+.
T Consensus       413 e~a~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~  492 (732)
T KOG0614|consen  413 EFAQVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDS  492 (732)
T ss_pred             hhcccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccc
Confidence            33456778899999999999999988                       5567899999999999999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHHhcCCCCCCCCCcC
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      ..+|++||-|-||+|+..|+++  +.|++..||
T Consensus       493 kyvYmLmEaClGGElWTiLrdR--g~Fdd~tar  523 (732)
T KOG0614|consen  493 KYVYMLMEACLGGELWTILRDR--GSFDDYTAR  523 (732)
T ss_pred             hhhhhhHHhhcCchhhhhhhhc--CCcccchhh
Confidence            9999999999999999999996  999988775

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.13  E-value=1.6e-10  Score=86.35  Aligned_cols=74  Identities=23%  Similarity=0.360  Sum_probs=65.4

Q ss_pred             cCCCeEEEEEeccCCceEEEe-------------------------------------chhhhHHHHHHHHHhCCCCCCC
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI-------------------------------------KKRNRVHIEKEILKMLDHPFLP  114 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~-------------------------------------~~~~~~~~E~~~l~~~~h~~iv  114 (156)
                      ..++|++.+.||+|+||.||+                                     ...+.+.+|+.++..++||||+
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~   82 (296)
T cd05051           3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIA   82 (296)
T ss_pred             chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEe
Confidence            356789999999999999994                                     1234577899999999999999


Q ss_pred             ceeEEEEeCCeEEEEEeccCCCCHHHHHHhc
Q 043174          115 SLFAEFEASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       115 ~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ++++++.+++.++++|||+++++|.+++.+.
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  113 (296)
T cd05051          83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKH  113 (296)
T ss_pred             EEEEEEecCCCcEEEEecCCCCCHHHHHHhc
Confidence            9999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.13  E-value=3e-10  Score=84.50  Aligned_cols=68  Identities=25%  Similarity=0.390  Sum_probs=59.6

Q ss_pred             CCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           74 DQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      ++|+++++||+|+||.||+                     ...+.+.+|+.++..++||||+++++.+.+++..+++|||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   80 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF   80 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence            3678899999999999998                     1124577899999999999999999999999999999999


Q ss_pred             cCCCCHHHH
Q 043174          133 CPGGDLLTV  141 (156)
Q Consensus       133 ~~~g~L~~~  141 (156)
                      +++|+|..+
T Consensus        81 ~~~~~l~~~   89 (279)
T cd06619          81 MDGGSLDVY   89 (279)
T ss_pred             CCCCChHHh
Confidence            999988654

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.13  E-value=1.2e-10  Score=86.67  Aligned_cols=77  Identities=26%  Similarity=0.480  Sum_probs=65.1

Q ss_pred             eEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           76 FQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      |++.+.||+|+||.||+                    +..+.+.+|+.+++.++|+||+++++.+..++..++++||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            67788999999999998                    2244678899999999999999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCCCCC
Q 043174          136 GDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       136 g~L~~~l~~~~~~~~~e~  153 (156)
                      |+|..++.+. .+.+++.
T Consensus        87 ~~l~~~~~~~-~~~l~~~  103 (282)
T cd06643          87 GAVDAVMLEL-ERPLTEP  103 (282)
T ss_pred             CcHHHHHHhc-CCCCCHH
Confidence            9999988653 2445543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.12  E-value=4e-10  Score=88.04  Aligned_cols=80  Identities=20%  Similarity=0.248  Sum_probs=66.4

Q ss_pred             cCCCeEEEEEeccCCceEEEe--------------c---hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccC
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI--------------K---KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCP  134 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~--------------~---~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~  134 (156)
                      ...+|.+++.||+|+||.||+              |   ......+|+.+++.++||||+++++.+.....+|++||++.
T Consensus        90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  169 (392)
T PHA03207         90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK  169 (392)
T ss_pred             ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC
Confidence            345799999999999999997              1   11245789999999999999999999999999999999986


Q ss_pred             CCCHHHHHHhcCCCCCCCCC
Q 043174          135 GGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       135 ~g~L~~~l~~~~~~~~~e~~  154 (156)
                       ++|.+++...  +.+++..
T Consensus       170 -~~l~~~l~~~--~~l~~~~  186 (392)
T PHA03207        170 -CDLFTYVDRS--GPLPLEQ  186 (392)
T ss_pred             -CCHHHHHHhc--CCCCHHH
Confidence             6999999654  5566543

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.12  E-value=6.1e-10  Score=83.72  Aligned_cols=78  Identities=21%  Similarity=0.374  Sum_probs=67.4

Q ss_pred             CCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           73 LDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      ..+|.+.+.||.|+||.||+                    ...+.+.+|+.+++.++||||+++++.+.....+++++||
T Consensus        18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   97 (296)
T cd06655          18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY   97 (296)
T ss_pred             cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence            35699999999999999997                    2234678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +++|+|..++..   ..+++.
T Consensus        98 ~~~~~L~~~~~~---~~l~~~  115 (296)
T cd06655          98 LAGGSLTDVVTE---TCMDEA  115 (296)
T ss_pred             cCCCcHHHHHHh---cCCCHH
Confidence            999999999876   345544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.12  E-value=1.9e-10  Score=87.55  Aligned_cols=77  Identities=19%  Similarity=0.261  Sum_probs=62.3

Q ss_pred             CeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC-----CeEE
Q 043174           75 QFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS-----HYSR  127 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~-----~~~~  127 (156)
                      .|.+.+.||+|+||.||+            |          ....+.+|+.+++.++||||+++++++...     ..+|
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            488999999999999998            1          123477899999999999999999987543     3589


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ++|||+. ++|.+++.+.  +.++++.
T Consensus        81 lv~e~~~-~~L~~~l~~~--~~~~~~~  104 (338)
T cd07859          81 VVFELME-SDLHQVIKAN--DDLTPEH  104 (338)
T ss_pred             EEEecCC-CCHHHHHHhc--ccCCHHH
Confidence            9999995 6999999875  5566543

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.12  E-value=2e-10  Score=84.80  Aligned_cols=73  Identities=26%  Similarity=0.398  Sum_probs=62.6

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR  127 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~  127 (156)
                      ..++|.+.+.||+|+||.||+                        +..+.+.+|+.++..+.||||+++++++.+ ...+
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~   82 (270)
T cd05056           4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVW   82 (270)
T ss_pred             chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcE
Confidence            456789999999999999997                        123457889999999999999999998875 4578


Q ss_pred             EEEeccCCCCHHHHHHhc
Q 043174          128 LVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~  145 (156)
                      ++|||+++|+|.+++.+.
T Consensus        83 lv~e~~~~~~L~~~l~~~  100 (270)
T cd05056          83 IVMELAPLGELRSYLQVN  100 (270)
T ss_pred             EEEEcCCCCcHHHHHHhC
Confidence            999999999999999864

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.12  E-value=1.7e-10  Score=86.00  Aligned_cols=72  Identities=24%  Similarity=0.314  Sum_probs=61.8

Q ss_pred             CCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC--CeE
Q 043174           74 DQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS--HYS  126 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~--~~~  126 (156)
                      ..|++++.||+|+||.||+                         +....+.+|+.+++.+.||||+++++++.+.  ..+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence            3478899999999999985                         1234678899999999999999999988775  578


Q ss_pred             EEEEeccCCCCHHHHHHhc
Q 043174          127 RLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~  145 (156)
                      +++|||++|++|.+++.+.
T Consensus        84 ~lv~e~~~g~~L~~~l~~~  102 (284)
T cd05079          84 KLIMEFLPSGSLKEYLPRN  102 (284)
T ss_pred             EEEEEccCCCCHHHHHHhc
Confidence            9999999999999999764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.12  E-value=3.1e-10  Score=83.21  Aligned_cols=77  Identities=23%  Similarity=0.403  Sum_probs=67.0

Q ss_pred             CeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           75 QFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      +|.+.+.||+|+||.||+                      +..+.+..|+.+++.++|+||+++++.+...+.+++++||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            478889999999999998                      1345788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +++++|.+++...  ..++++
T Consensus        81 ~~~~~L~~~~~~~--~~~~~~   99 (264)
T cd06626          81 CSGGTLEELLEHG--RILDEH   99 (264)
T ss_pred             CCCCcHHHHHhhc--CCCChH
Confidence            9999999999874  445543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.12  E-value=9.6e-11  Score=86.12  Aligned_cols=66  Identities=20%  Similarity=0.265  Sum_probs=57.4

Q ss_pred             EEeccCCceEEEe---------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           80 RRLGSGIIRSVYI---------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        80 ~~lG~G~~g~V~~---------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      +.||.|+||.||+                           +..+.+..|+.++..+.||||+++++.+.++...+++|||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            3689999999997                           1123467788899999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhc
Q 043174          133 CPGGDLLTVSQRQ  145 (156)
Q Consensus       133 ~~~g~L~~~l~~~  145 (156)
                      +++|+|..+++.+
T Consensus        81 ~~~g~L~~~l~~~   93 (258)
T cd05078          81 VKFGSLDTYLKKN   93 (258)
T ss_pred             CCCCcHHHHHhcC
Confidence            9999999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.12  E-value=2.5e-10  Score=84.73  Aligned_cols=74  Identities=23%  Similarity=0.339  Sum_probs=65.0

Q ss_pred             cCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      ..++|.+.+.||+|+||.||+                          .....+.+|+.+++.++|+||+++++++.+...
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP   83 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            456799999999999999996                          012357889999999999999999999999899


Q ss_pred             EEEEEeccCCCCHHHHHHhc
Q 043174          126 SRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~  145 (156)
                      .+++|||+++|+|.+++.+.
T Consensus        84 ~~lv~e~~~g~~L~~~i~~~  103 (277)
T cd05036          84 RFILLELMAGGDLKSFLREN  103 (277)
T ss_pred             cEEEEecCCCCCHHHHHHHh
Confidence            99999999999999999875

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.11  E-value=2.9e-10  Score=84.38  Aligned_cols=77  Identities=23%  Similarity=0.362  Sum_probs=65.7

Q ss_pred             CeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           75 QFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      +|++.+.||+|+||.||+                      .....+.+|+.+++.++|+||+++++++.+...+++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            478999999999999998                      1124678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      + +++|.+++... .+.+++.
T Consensus        81 ~-~~~L~~~~~~~-~~~~~~~   99 (286)
T cd07832          81 M-PSDLSEVLRDE-ERPLPEA   99 (286)
T ss_pred             c-CCCHHHHHHhc-CCCCCHH
Confidence            9 99999999764 2445554

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.11  E-value=2.7e-12  Score=93.09  Aligned_cols=80  Identities=21%  Similarity=0.343  Sum_probs=69.7

Q ss_pred             cCCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      ..+.|.+.+.||+|.|+.|++                      ...+.+.+|+.|.+.++||||++|.+.+......|+|
T Consensus         9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv   88 (355)
T KOG0033|consen    9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV   88 (355)
T ss_pred             cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence            357788899999999999998                      3456789999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCC
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +|++.||+|+.-|-++  ..++|-
T Consensus        89 Fe~m~G~dl~~eIV~R--~~ySEa  110 (355)
T KOG0033|consen   89 FDLVTGGELFEDIVAR--EFYSEA  110 (355)
T ss_pred             EecccchHHHHHHHHH--HHHHHH
Confidence            9999999998887664  556554

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.10  E-value=7.1e-10  Score=82.78  Aligned_cols=71  Identities=27%  Similarity=0.455  Sum_probs=60.9

Q ss_pred             CCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe--CCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA--SHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~--~~~~~lv~  130 (156)
                      ++|...+.||.|++|.||+                     .....+.+|+++++.++||||+++++.+.+  .+.+|++|
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            4688999999999999998                     123457899999999999999999998865  44799999


Q ss_pred             eccCCCCHHHHHHh
Q 043174          131 EYCPGGDLLTVSQR  144 (156)
Q Consensus       131 E~~~~g~L~~~l~~  144 (156)
                      ||+++++|.+++..
T Consensus        81 e~~~~~~L~~~l~~   94 (287)
T cd06621          81 EYCEGGSLDSIYKK   94 (287)
T ss_pred             EecCCCCHHHHHHH
Confidence            99999999988764

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.10  E-value=3.9e-10  Score=82.47  Aligned_cols=79  Identities=23%  Similarity=0.428  Sum_probs=64.7

Q ss_pred             CeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe-CCeEEEEEe
Q 043174           75 QFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA-SHYSRLVIE  131 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~-~~~~~lv~E  131 (156)
                      .|++.+.||+|+||.||.                      ...+.+.+|+.+++.++|+|++++++.+.. ...+|++||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            488999999999999997                      122457889999999999999999988764 557899999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |+++++|.+++.......+++.
T Consensus        81 ~~~~~~l~~~l~~~~~~~l~~~  102 (257)
T cd08223          81 FCEGGDLYHKLKEQKGKLLPEN  102 (257)
T ss_pred             ccCCCcHHHHHHHhcCCCCCHH
Confidence            9999999999987533445554

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.10  E-value=3.4e-10  Score=83.23  Aligned_cols=73  Identities=26%  Similarity=0.353  Sum_probs=62.3

Q ss_pred             cCCCeEEEEEeccCCceEEEe-----------c-------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI-----------K-------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~-----------~-------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      ..++|.+...||+|+||.||+           |       ..+.+.+|+.++..+.|+|++++++++. .+..+++|||+
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~   82 (260)
T cd05069           4 PRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFM   82 (260)
T ss_pred             ChHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcC
Confidence            346789999999999999997           1       1245788999999999999999999875 45689999999


Q ss_pred             CCCCHHHHHHhc
Q 043174          134 PGGDLLTVSQRQ  145 (156)
Q Consensus       134 ~~g~L~~~l~~~  145 (156)
                      ++|+|.+++...
T Consensus        83 ~~~~L~~~~~~~   94 (260)
T cd05069          83 GKGSLLDFLKEG   94 (260)
T ss_pred             CCCCHHHHHhhC
Confidence            999999999864

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.10  E-value=5.7e-10  Score=82.21  Aligned_cols=78  Identities=23%  Similarity=0.376  Sum_probs=65.1

Q ss_pred             CCeEEEEEeccCCceEEEe------------c-------------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC--CeE
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K-------------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS--HYS  126 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~-------------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~--~~~  126 (156)
                      .+|.+.+.||+|+||.||+            +             ....+.+|+.+++.++|+||+++++.+.+.  ..+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            4789999999999999999            1             123577899999999999999999988764  468


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++++||+++++|.+++...  +.+++.
T Consensus        82 ~~v~e~~~~~~L~~~~~~~--~~l~~~  106 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAY--GALTEN  106 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHc--CCCCHH
Confidence            9999999999999999875  445543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.10  E-value=1.9e-10  Score=84.71  Aligned_cols=71  Identities=28%  Similarity=0.497  Sum_probs=63.3

Q ss_pred             CCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ++|.+.+.||+|+||.||+            +           ....+.+|+.++..++|+||+++++.+..++.++++|
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            5788889999999999998            1           2246778999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHh
Q 043174          131 EYCPGGDLLTVSQR  144 (156)
Q Consensus       131 E~~~~g~L~~~l~~  144 (156)
                      ||+++++|.+++..
T Consensus        82 e~~~~~~L~~~~~~   95 (267)
T cd08229          82 ELADAGDLSRMIKH   95 (267)
T ss_pred             EecCCCCHHHHHHH
Confidence            99999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.09  E-value=3.7e-10  Score=84.13  Aligned_cols=63  Identities=30%  Similarity=0.329  Sum_probs=55.0

Q ss_pred             eccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCH
Q 043174           82 LGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDL  138 (156)
Q Consensus        82 lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L  138 (156)
                      ||+|+||.||+            |           ..+.+..|+.+++.++|+||+++.+++.....+|++|||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            69999999997            1           123456799999999999999999999999999999999999999


Q ss_pred             HHHHHh
Q 043174          139 LTVSQR  144 (156)
Q Consensus       139 ~~~l~~  144 (156)
                      ..++..
T Consensus        81 ~~~~~~   86 (280)
T cd05608          81 RYHIYN   86 (280)
T ss_pred             HHHHHh
Confidence            988854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.09  E-value=2.9e-10  Score=82.90  Aligned_cols=66  Identities=29%  Similarity=0.472  Sum_probs=57.8

Q ss_pred             EEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCHH
Q 043174           80 RRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLL  139 (156)
Q Consensus        80 ~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~  139 (156)
                      ++||+|+||.||+                    +....+.+|+.++..++||||+++++.+......+++|||+++|+|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            3689999999997                    11235778999999999999999999999999999999999999999


Q ss_pred             HHHHhc
Q 043174          140 TVSQRQ  145 (156)
Q Consensus       140 ~~l~~~  145 (156)
                      +++...
T Consensus        81 ~~~~~~   86 (250)
T cd05085          81 SFLRKK   86 (250)
T ss_pred             HHHHhc
Confidence            999764

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.09  E-value=4.3e-10  Score=83.52  Aligned_cols=78  Identities=21%  Similarity=0.259  Sum_probs=64.5

Q ss_pred             CeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           75 QFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      +|.+.+.||+|+||.||+            +          ....+.+|+.++..++||||+++++.+.+++.+|+||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            478899999999999999            1          123578899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCC-CCCCCC
Q 043174          133 CPGGDLLTVSQRQRR-LRFSIP  153 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~-~~~~e~  153 (156)
                      ++ ++|.+++..... +.+++.
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~  101 (285)
T cd07861          81 LS-MDLKKYLDSLPKGQYMDAE  101 (285)
T ss_pred             CC-CCHHHHHhcCCCCCcCCHH
Confidence            98 689998876422 335443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.09  E-value=1.1e-10  Score=93.30  Aligned_cols=79  Identities=23%  Similarity=0.391  Sum_probs=67.0

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe-----------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI-----------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~-----------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      ..+.+..+.+.-++.||.|+-|.||+           |..+.-..+|+-|++++|+||+.+.|+|.....+||+||||..
T Consensus       117 e~WeiPFe~IsELeWlGSGaQGAVF~Grl~netVAVKKV~elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~  196 (904)
T KOG4721|consen  117 ELWEIPFEEISELEWLGSGAQGAVFLGRLHNETVAVKKVRELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQ  196 (904)
T ss_pred             hhccCCHHHhhhhhhhccCcccceeeeeccCceehhHHHhhhhhhhHHHHHhccCcceeeEeeeecCCceeEEeeecccc
Confidence            34555556666678899999999999           3334456788899999999999999999999999999999999


Q ss_pred             CCHHHHHHhc
Q 043174          136 GDLLTVSQRQ  145 (156)
Q Consensus       136 g~L~~~l~~~  145 (156)
                      |.|+..|+..
T Consensus       197 GqL~~VLka~  206 (904)
T KOG4721|consen  197 GQLYEVLKAG  206 (904)
T ss_pred             ccHHHHHhcc
Confidence            9999999875

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.09  E-value=4.3e-10  Score=85.17  Aligned_cols=74  Identities=24%  Similarity=0.364  Sum_probs=63.3

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      +...+|++.+.||+|+||.||+                         +..+.+.+|+.++..++||||+++++.+... .
T Consensus         4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~   82 (316)
T cd05108           4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-T   82 (316)
T ss_pred             cchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-C
Confidence            4467899999999999999997                         1124577899999999999999999988764 5


Q ss_pred             EEEEEeccCCCCHHHHHHhc
Q 043174          126 SRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~  145 (156)
                      .++++||+++|+|.+++...
T Consensus        83 ~~~v~e~~~~g~l~~~l~~~  102 (316)
T cd05108          83 VQLITQLMPFGCLLDYVREH  102 (316)
T ss_pred             ceeeeecCCCCCHHHHHHhc
Confidence            78999999999999999875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.09  E-value=6.9e-11  Score=86.45  Aligned_cols=71  Identities=31%  Similarity=0.488  Sum_probs=62.5

Q ss_pred             CCeEEEEEeccCCceEEEe------------ch----------hhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------KK----------RNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~~----------~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      ..|...+.||+|+||.||+            |.          -....+||+.|+.++|+||+.+.++|-....+.+|+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            4577788999999999999            11          2357899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhc
Q 043174          132 YCPGGDLLTVSQRQ  145 (156)
Q Consensus       132 ~~~~g~L~~~l~~~  145 (156)
                      |++. ||...|+..
T Consensus        82 fm~t-dLe~vIkd~   94 (318)
T KOG0659|consen   82 FMPT-DLEVVIKDK   94 (318)
T ss_pred             eccc-cHHHHhccc
Confidence            9985 999999874

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.09  E-value=1.3e-10  Score=92.32  Aligned_cols=75  Identities=29%  Similarity=0.350  Sum_probs=65.9

Q ss_pred             EEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCC
Q 043174           79 FRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGG  136 (156)
Q Consensus        79 ~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g  136 (156)
                      .++||.|.||+||-                      ++...+++|+.||..++||.||.+-.+|++++.+++|||.+. |
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-G  647 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-G  647 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-c
Confidence            57899999999998                      455678999999999999999999999999999999999996 6


Q ss_pred             CHHHHHHhcCCCCCCCCC
Q 043174          137 DLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       137 ~L~~~l~~~~~~~~~e~~  154 (156)
                      |..+.|-....++++|.-
T Consensus       648 DMLEMILSsEkgRL~er~  665 (888)
T KOG4236|consen  648 DMLEMILSSEKGRLPERI  665 (888)
T ss_pred             hHHHHHHHhhcccchHHH
Confidence            888877666678888753

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.09  E-value=1.7e-10  Score=85.24  Aligned_cols=78  Identities=32%  Similarity=0.536  Sum_probs=66.9

Q ss_pred             CCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCC-CCCCCceeEEEEeCCeEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLD-HPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~-h~~iv~l~~~~~~~~~~~lv  129 (156)
                      ++|.+.+.||+|+||.||+                       +....+.+|+.++..+. |+||+++++++.+.+.++++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            4689999999999999998                       11235778899999998 99999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCC
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||++++++|.+++.+.  +.+++.
T Consensus        81 ~e~~~~~~L~~~l~~~--~~l~~~  102 (280)
T cd05581          81 LEYAPNGELLQYIRKY--GSLDEK  102 (280)
T ss_pred             EcCCCCCcHHHHHHHc--CCCCHH
Confidence            9999999999999875  455543

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.08  E-value=2.6e-10  Score=84.35  Aligned_cols=71  Identities=23%  Similarity=0.514  Sum_probs=63.1

Q ss_pred             CCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           74 DQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      ++|.+.+.||.|+||.||+                     .....+.+|+.+++.++|+||+++++.+.++..+|+++||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            3578888999999999998                     1224578899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHh
Q 043174          133 CPGGDLLTVSQR  144 (156)
Q Consensus       133 ~~~g~L~~~l~~  144 (156)
                      +++++|.+++..
T Consensus        81 ~~~~~L~~~~~~   92 (274)
T cd06609          81 CGGGSCLDLLKP   92 (274)
T ss_pred             eCCCcHHHHHhh
Confidence            999999999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.08  E-value=6.8e-10  Score=81.91  Aligned_cols=73  Identities=21%  Similarity=0.302  Sum_probs=63.6

Q ss_pred             CCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           73 LDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      .+++.....||+|+||.||+                    ...+.+.+|+.++..++|+||+++++++...+.+++++||
T Consensus         7 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   86 (268)
T cd06624           7 YDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQ   86 (268)
T ss_pred             cccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEec
Confidence            45555567899999999998                    1334688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhc
Q 043174          133 CPGGDLLTVSQRQ  145 (156)
Q Consensus       133 ~~~g~L~~~l~~~  145 (156)
                      +++++|.++++..
T Consensus        87 ~~~~~L~~~l~~~   99 (268)
T cd06624          87 VPGGSLSALLRSK   99 (268)
T ss_pred             CCCCCHHHHHHHh
Confidence            9999999999864

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.08  E-value=7.4e-10  Score=81.69  Aligned_cols=77  Identities=21%  Similarity=0.340  Sum_probs=64.2

Q ss_pred             CCeEEEEEeccCCceEEEe------------c-------------hhhhHHHHHHHHHhCCCCCCCceeEEEEe--CCeE
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K-------------KRNRVHIEKEILKMLDHPFLPSLFAEFEA--SHYS  126 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~-------------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~--~~~~  126 (156)
                      .+|...+.||+|+||.||+            +             ....+.+|+.+++.++||||+++++.+.+  ...+
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            3688899999999999998            1             12357889999999999999999998876  4678


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      ++++||+++++|.+++.+.  +.+++
T Consensus        82 ~l~~e~~~~~~L~~~l~~~--~~l~~  105 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAY--GALTE  105 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHc--CCCCH
Confidence            9999999999999999874  44544

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.08  E-value=2.1e-10  Score=85.28  Aligned_cols=77  Identities=21%  Similarity=0.219  Sum_probs=64.5

Q ss_pred             CCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      ++|++.+.||+|+||.||+            |          ..+.+.+|++++..++||||+++++++.++...|+++|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            4688999999999999999            1          12346789999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      |++++.|..++...  +.+++
T Consensus        81 ~~~~~~l~~~~~~~--~~~~~   99 (286)
T cd07846          81 FVDHTVLDDLEKYP--NGLDE   99 (286)
T ss_pred             cCCccHHHHHHhcc--CCCCH
Confidence            99998888876543  33443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.08  E-value=7.2e-10  Score=82.42  Aligned_cols=74  Identities=26%  Similarity=0.486  Sum_probs=61.8

Q ss_pred             ccCCCeEEEEEeccCCceEEEe------------c-------hhhhHHHHHHHHHhC-CCCCCCceeEEEE-----eCCe
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI------------K-------KRNRVHIEKEILKML-DHPFLPSLFAEFE-----ASHY  125 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~------------~-------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~-----~~~~  125 (156)
                      ...++|++.+.||+|+||.||+            +       ....+.+|+.++..+ +|+||+++++.+.     +.+.
T Consensus        15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~   94 (286)
T cd06638          15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQ   94 (286)
T ss_pred             CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCe
Confidence            3468899999999999999997            1       123567899999998 7999999999873     3567


Q ss_pred             EEEEEeccCCCCHHHHHHh
Q 043174          126 SRLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~  144 (156)
                      ++++|||+++|+|.+++..
T Consensus        95 ~~lv~e~~~~~~L~~~l~~  113 (286)
T cd06638          95 LWLVLELCNGGSVTDLVKG  113 (286)
T ss_pred             EEEEEeecCCCCHHHHHHH
Confidence            9999999999999998864

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.08  E-value=2e-11  Score=94.25  Aligned_cols=78  Identities=18%  Similarity=0.358  Sum_probs=68.0

Q ss_pred             CCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           74 DQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      ..|..++.||+|+||.||+                     ..++.+..|+.++.+++++||.++|+.+..+..++++|||
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey   92 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY   92 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence            3466678999999999999                     3456788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |.||++.++++..  +.++|.
T Consensus        93 ~~gGsv~~lL~~~--~~~~E~  111 (467)
T KOG0201|consen   93 CGGGSVLDLLKSG--NILDEF  111 (467)
T ss_pred             hcCcchhhhhccC--CCCccc
Confidence            9999999999873  444554

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.08  E-value=4.2e-10  Score=83.51  Aligned_cols=72  Identities=29%  Similarity=0.296  Sum_probs=59.7

Q ss_pred             eccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCH
Q 043174           82 LGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDL  138 (156)
Q Consensus        82 lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L  138 (156)
                      ||+|+||.||+            +           ..+.+..|+.+++.++||||+++++.+...+.+|++|||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            68999999987            1           123457899999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCCC
Q 043174          139 LTVSQRQRRLRFSIP  153 (156)
Q Consensus       139 ~~~l~~~~~~~~~e~  153 (156)
                      .+++.+.....+++.
T Consensus        81 ~~~l~~~~~~~~~~~   95 (277)
T cd05577          81 KYHIYNVGEPGFPEA   95 (277)
T ss_pred             HHHHHHcCcCCCCHH
Confidence            999987522356554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.07  E-value=5.2e-10  Score=83.20  Aligned_cols=75  Identities=24%  Similarity=0.332  Sum_probs=61.3

Q ss_pred             eEEEEEeccCCceEEEe----------------c---------hhhhHHHHHHHHHhCCCCCCCceeEEEEe--CCeEEE
Q 043174           76 FQLFRRLGSGIIRSVYI----------------K---------KRNRVHIEKEILKMLDHPFLPSLFAEFEA--SHYSRL  128 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~----------------~---------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~--~~~~~l  128 (156)
                      |++.+.||+|+||.||+                |         ....+.+|+.+++.++||||+++++++..  ...+++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            48899999999999964                1         12356789999999999999999998765  346899


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +|||+++|+|.+++...   .+++.
T Consensus        86 v~e~~~~~~l~~~~~~~---~l~~~  107 (283)
T cd05080          86 IMEYVPLGSLRDYLPKH---KLNLA  107 (283)
T ss_pred             EecCCCCCCHHHHHHHc---CCCHH
Confidence            99999999999999763   45543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.07  E-value=6.8e-10  Score=81.34  Aligned_cols=77  Identities=21%  Similarity=0.369  Sum_probs=67.3

Q ss_pred             CCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           74 DQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      ++|++.+.||+|++|.||+                     .....+.+|+.++..++|+||+++++.+.....++++|||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            4688999999999999998                     1245688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e  152 (156)
                      +++++|.+++...  ..+++
T Consensus        81 ~~~~~L~~~l~~~--~~l~~   98 (264)
T cd06623          81 MDGGSLADLLKKV--GKIPE   98 (264)
T ss_pred             cCCCcHHHHHHHc--CCCCH
Confidence            9999999999874  44554

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.07  E-value=1.9e-10  Score=89.09  Aligned_cols=77  Identities=22%  Similarity=0.237  Sum_probs=63.5

Q ss_pred             CeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCC-----eEE
Q 043174           75 QFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASH-----YSR  127 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~-----~~~  127 (156)
                      +|++.+.||+|+||.||+            |          ..+.+.+|+.+++.++|+||+++++++.+..     .+|
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            478889999999999998            1          1235788999999999999999999998876     799


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ++|||+. ++|.+.+...  +.+++..
T Consensus        81 lv~e~~~-~~l~~~~~~~--~~l~~~~  104 (372)
T cd07853          81 VVTELMQ-SDLHKIIVSP--QPLSSDH  104 (372)
T ss_pred             EEeeccc-cCHHHHHhcC--CCCCHHH
Confidence            9999997 5898888764  5566543

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.07  E-value=1.3e-10  Score=90.48  Aligned_cols=87  Identities=30%  Similarity=0.372  Sum_probs=75.6

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      ..+..+.|..-++||+|+||.||-                       +......+|..||..++.++||.+-..|++.+.
T Consensus       180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~  259 (591)
T KOG0986|consen  180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDA  259 (591)
T ss_pred             hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCc
Confidence            345678899999999999999998                       112357899999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      +|+|+..++||||.-+|-+.-...|+|..|
T Consensus       260 LClVLtlMNGGDLkfHiyn~g~~gF~e~ra  289 (591)
T KOG0986|consen  260 LCLVLTLMNGGDLKFHIYNHGNPGFDEQRA  289 (591)
T ss_pred             eEEEEEeecCCceeEEeeccCCCCCchHHH
Confidence            999999999999999998873347988776

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.07  E-value=2.8e-10  Score=83.10  Aligned_cols=79  Identities=23%  Similarity=0.444  Sum_probs=67.9

Q ss_pred             CCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccC
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCP  134 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~  134 (156)
                      .++|++.+.||+|+||.||+                  ...+.+.+|+++++.++|+||+++++.+.+...+|+++||++
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   81 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG   81 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence            46789999999999999998                  124568899999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCCCC
Q 043174          135 GGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       135 ~g~L~~~l~~~~~~~~~e  152 (156)
                      +++|.+++... ...+++
T Consensus        82 ~~~L~~~l~~~-~~~l~~   98 (256)
T cd06612          82 AGSVSDIMKIT-NKTLTE   98 (256)
T ss_pred             CCcHHHHHHhC-ccCCCH
Confidence            99999999764 234444

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.07  E-value=3e-10  Score=87.11  Aligned_cols=77  Identities=22%  Similarity=0.301  Sum_probs=63.9

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe-----------------c---------hhhhHHHHHHHHHhC-CCCCCCceeEEEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI-----------------K---------KRNRVHIEKEILKML-DHPFLPSLFAEFE  121 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~-----------------~---------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~  121 (156)
                      +.+..++|++.+.||+|+||.||+                 |         ..+.+..|+.++..+ +|+||+++++++.
T Consensus         2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~   81 (337)
T cd05054           2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACT   81 (337)
T ss_pred             cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence            345556899999999999999996                 1         123467799999999 8999999999776


Q ss_pred             e-CCeEEEEEeccCCCCHHHHHHhc
Q 043174          122 A-SHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       122 ~-~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      . ...++++|||+++|+|.++|...
T Consensus        82 ~~~~~~~~v~ey~~~~~L~~~i~~~  106 (337)
T cd05054          82 KPGGPLMVIVEYCKFGNLSNYLRSK  106 (337)
T ss_pred             cCCCCEEEEEecCCCCCHHHHHHhc
Confidence            5 56799999999999999999764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.06  E-value=6.2e-10  Score=82.72  Aligned_cols=78  Identities=19%  Similarity=0.230  Sum_probs=64.3

Q ss_pred             CCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      ++|++.+.||+|+||.||+            +          ....+.+|+++++.+.|+||+++++.+.+++.++++||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            3689999999999999998            1          12457899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |++++.+..++.+.  ..++++
T Consensus        81 ~~~~~~l~~~~~~~--~~~~~~  100 (288)
T cd07833          81 YVERTLLELLEASP--GGLPPD  100 (288)
T ss_pred             cCCCCHHHHHHhcC--CCCCHH
Confidence            99987666655543  445543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.06  E-value=4.4e-10  Score=86.75  Aligned_cols=80  Identities=18%  Similarity=0.294  Sum_probs=66.3

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------c--hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCC
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------K--KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGD  137 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------~--~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~  137 (156)
                      ...+|.+.+.||+|+||.||+            |  .......|+.++..++|+||+++++++......++|||++. |+
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~  142 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SD  142 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-Cc
Confidence            346799999999999999999            1  12345679999999999999999999999999999999995 69


Q ss_pred             HHHHHHhcCCCCCCCC
Q 043174          138 LLTVSQRQRRLRFSIP  153 (156)
Q Consensus       138 L~~~l~~~~~~~~~e~  153 (156)
                      |.+++... .+.+++.
T Consensus       143 l~~~l~~~-~~~~~~~  157 (357)
T PHA03209        143 LYTYLTKR-SRPLPID  157 (357)
T ss_pred             HHHHHHhc-cCCCCHH
Confidence            99998764 3445544

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.06  E-value=6.2e-10  Score=81.90  Aligned_cols=81  Identities=25%  Similarity=0.472  Sum_probs=66.2

Q ss_pred             CCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCC------eE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASH------YS  126 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~------~~  126 (156)
                      .++|++.+.||+|+||.||+                   ...+.+.+|+.+++.+ .|+||+++++.+.+..      .+
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   84 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL   84 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence            47899999999999999999                   1234678899999998 7999999999997654      48


Q ss_pred             EEEEeccCCCCHHHHHHhcC--CCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQR--RLRFSIP  153 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~--~~~~~e~  153 (156)
                      +++|||+++++|.+++....  ...++++
T Consensus        85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~  113 (275)
T cd06608          85 WLVMELCGGGSVTDLVKGLRKKGKRLKEE  113 (275)
T ss_pred             EEEEEcCCCCcHHHHHHHHhhcCCCCCHH
Confidence            99999999999999987642  2345543

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.06  E-value=4.4e-10  Score=83.83  Aligned_cols=77  Identities=29%  Similarity=0.592  Sum_probs=64.3

Q ss_pred             CeEEEEEeccCCceEEEe---------------c------------hhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeE
Q 043174           75 QFQLFRRLGSGIIRSVYI---------------K------------KRNRVHIEKEILKML-DHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~---------------~------------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~  126 (156)
                      +|.+.+.||+|+||.||+               +            ....+.+|+.++..+ +|+||+++++.+.....+
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            478899999999999996               0            113466899999999 699999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++||||+++|+|.+++...  +.+++.
T Consensus        81 ~lv~e~~~~~~L~~~~~~~--~~~~~~  105 (288)
T cd05583          81 HLILDYVNGGELFTHLYQR--EHFTES  105 (288)
T ss_pred             EEEEecCCCCcHHHHHhhc--CCcCHH
Confidence            9999999999999999764  445543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.05  E-value=3.9e-10  Score=83.93  Aligned_cols=81  Identities=20%  Similarity=0.288  Sum_probs=63.4

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      +..++|++.+.||+|+||.||+                         .....+..|+.++..+.||||+++++++. ...
T Consensus         4 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~   82 (279)
T cd05111           4 LKETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GAS   82 (279)
T ss_pred             CCHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCc
Confidence            4457889999999999999997                         01234566777788899999999999875 456


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      .++++||+++|+|.+++... .+.+++.
T Consensus        83 ~~~i~e~~~~gsL~~~l~~~-~~~~~~~  109 (279)
T cd05111          83 LQLVTQLSPLGSLLDHVRQH-RDSLDPQ  109 (279)
T ss_pred             cEEEEEeCCCCcHHHHHHhc-ccCCCHH
Confidence            78999999999999999764 2445543

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.05  E-value=1.4e-09  Score=86.96  Aligned_cols=79  Identities=22%  Similarity=0.197  Sum_probs=65.9

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c--hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCH
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K--KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDL  138 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~--~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L  138 (156)
                      ...|.+.+.||+|+||.||+            |  ....+.+|+++++.++|+|||++++++...+..+++||++. |+|
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L  246 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWYASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDL  246 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCH
Confidence            45799999999999999999            1  12346789999999999999999999999999999999995 799


Q ss_pred             HHHHHhcCCCCCCCC
Q 043174          139 LTVSQRQRRLRFSIP  153 (156)
Q Consensus       139 ~~~l~~~~~~~~~e~  153 (156)
                      ..++... .+.+++.
T Consensus       247 ~~~l~~~-~~~l~~~  260 (461)
T PHA03211        247 YTYLGAR-LRPLGLA  260 (461)
T ss_pred             HHHHHhc-CCCCCHH
Confidence            9998764 2345543

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.05  E-value=1e-09  Score=82.10  Aligned_cols=71  Identities=25%  Similarity=0.297  Sum_probs=62.2

Q ss_pred             CCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      ++|++.+.||+|.+|.||+            |          ....+.+|+.+++.++||||+++++.+.+....|+|||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            6799999999999999999            1          11346789999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhc
Q 043174          132 YCPGGDLLTVSQRQ  145 (156)
Q Consensus       132 ~~~~g~L~~~l~~~  145 (156)
                      |++ ++|.+++...
T Consensus        82 ~~~-~~l~~~~~~~   94 (294)
T PLN00009         82 YLD-LDLKKHMDSS   94 (294)
T ss_pred             ccc-ccHHHHHHhC
Confidence            996 5888888765

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.05  E-value=1.2e-09  Score=79.45  Aligned_cols=77  Identities=25%  Similarity=0.395  Sum_probs=66.9

Q ss_pred             CeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           75 QFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      +|.+.+.||+|++|.||+                      .....+.+|++++..++|+|++++++++.+.+..+++|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            478899999999999998                      1234688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +++++|.+++.+.  +.++++
T Consensus        81 ~~~~~L~~~~~~~--~~l~~~   99 (254)
T cd06627          81 AENGSLRQIIKKF--GPFPES   99 (254)
T ss_pred             CCCCcHHHHHHhc--cCCCHH
Confidence            9999999999875  555544

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.05  E-value=5e-10  Score=83.20  Aligned_cols=78  Identities=26%  Similarity=0.360  Sum_probs=65.0

Q ss_pred             CeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           75 QFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      +|++++.||.|+||.||+            +          ....+.+|+++++.++||||+++++.+.+....+++|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            488899999999999998            1          123578899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +. ++|..++.......+++.
T Consensus        81 ~~-~~l~~~~~~~~~~~l~~~  100 (284)
T cd07860          81 LH-QDLKKFMDASPLSGIPLP  100 (284)
T ss_pred             cc-cCHHHHHHhCCCCCCCHH
Confidence            96 689998876533445543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.05  E-value=5.4e-10  Score=85.18  Aligned_cols=72  Identities=32%  Similarity=0.455  Sum_probs=57.4

Q ss_pred             eccCCceEEEe------------c-----------hhhhHHHHHHHHHhC---CCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           82 LGSGIIRSVYI------------K-----------KRNRVHIEKEILKML---DHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        82 lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~---~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      ||+|+||.||+            |           .......|..++...   +||||+.+++.+.+...+|+||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            69999999998            1           112234566666654   699999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCCCCCCc
Q 043174          136 GDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       136 g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |+|..++.+.  +.+++..+
T Consensus        81 g~L~~~l~~~--~~~~~~~~   98 (330)
T cd05586          81 GELFWHLQKE--GRFSEDRA   98 (330)
T ss_pred             ChHHHHHHhc--CCCCHHHH
Confidence            9999999875  66776543

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.05  E-value=7.3e-10  Score=81.96  Aligned_cols=65  Identities=31%  Similarity=0.460  Sum_probs=56.9

Q ss_pred             EeccCCceEEEe-----------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEEeccCCC
Q 043174           81 RLGSGIIRSVYI-----------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPGG  136 (156)
Q Consensus        81 ~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~E~~~~g  136 (156)
                      .||+|+||.||+                       ...+.+.+|+.++..+ +||||+++++.+...+.++++|||+++|
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~   81 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG   81 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence            589999999987                       1123567899999999 8999999999999999999999999999


Q ss_pred             CHHHHHHhc
Q 043174          137 DLLTVSQRQ  145 (156)
Q Consensus       137 ~L~~~l~~~  145 (156)
                      +|.+++..+
T Consensus        82 ~L~~~i~~~   90 (270)
T cd05047          82 NLLDFLRKS   90 (270)
T ss_pred             cHHHHHHhc
Confidence            999999864

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>PRK10345 hypothetical protein; Provisional

Probab=99.04  E-value=1e-09  Score=79.09  Aligned_cols=72  Identities=21%  Similarity=0.366  Sum_probs=58.6

Q ss_pred             EEEeccCCceEEEe---------c--------hhhhHHHHHHHHHhC-----CCCCCCceeEEEEeCC---eEE-EEEec
Q 043174           79 FRRLGSGIIRSVYI---------K--------KRNRVHIEKEILKML-----DHPFLPSLFAEFEASH---YSR-LVIEY  132 (156)
Q Consensus        79 ~~~lG~G~~g~V~~---------~--------~~~~~~~E~~~l~~~-----~h~~iv~l~~~~~~~~---~~~-lv~E~  132 (156)
                      ...||+|+||.||.         |        ..+.+.+|+.++..+     .||||++++++++++.   .++ +|+||
T Consensus         7 ~~~LG~G~~~~Vy~hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~   86 (210)
T PRK10345          7 QSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADF   86 (210)
T ss_pred             cceecCCCceEEEECCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecC
Confidence            46799999999999         1        345689999999999     5799999999999863   444 78999


Q ss_pred             --cCCCCHHHHHHhcCCCCCCCC
Q 043174          133 --CPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       133 --~~~g~L~~~l~~~~~~~~~e~  153 (156)
                        +++|+|.+++++   +.+.|+
T Consensus        87 ~G~~~~tL~~~l~~---~~~~e~  106 (210)
T PRK10345         87 DGKPSITLTEFAEQ---CRYEED  106 (210)
T ss_pred             CCCcchhHHHHHHc---ccccHh
Confidence              668999999976   345553

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.04  E-value=5.8e-11  Score=94.05  Aligned_cols=78  Identities=23%  Similarity=0.460  Sum_probs=67.8

Q ss_pred             CCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           73 LDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      ...|.....||+|+-|.||.                    ...+.+.+|+.+|+..+|+|||++++.|.-.+.+++||||
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy  351 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY  351 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence            34577778899999999999                    2345689999999999999999999999888999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++||+|.+.+...   .++|.
T Consensus       352 m~ggsLTDvVt~~---~~~E~  369 (550)
T KOG0578|consen  352 MEGGSLTDVVTKT---RMTEG  369 (550)
T ss_pred             cCCCchhhhhhcc---cccHH
Confidence            9999999999873   56664

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.04  E-value=6.5e-10  Score=83.19  Aligned_cols=77  Identities=25%  Similarity=0.352  Sum_probs=64.0

Q ss_pred             CeEEEEEeccCCceEEEe------------c-------------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEE
Q 043174           75 QFQLFRRLGSGIIRSVYI------------K-------------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~------------~-------------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      +|++.+.||+|+||.||+            +             ....+..|+.++..++|+||+++++++.+.+.+++|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            378889999999999998            0             112356799999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCC
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |||+ +|+|.+++.... ..+++.
T Consensus        81 ~e~~-~~~L~~~i~~~~-~~~~~~  102 (298)
T cd07841          81 FEFM-ETDLEKVIKDKS-IVLTPA  102 (298)
T ss_pred             Eccc-CCCHHHHHhccC-CCCCHH
Confidence            9999 899999998751 245543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.03  E-value=1.4e-09  Score=90.15  Aligned_cols=83  Identities=23%  Similarity=0.488  Sum_probs=67.9

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEe-----CCe
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEA-----SHY  125 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~-----~~~  125 (156)
                      ...+-|++..+||.|.+|.||+                   ..-+.+..|..|++.+ +|||++.++|+|..     ++.
T Consensus        16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~Dq   95 (953)
T KOG0587|consen   16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQ   95 (953)
T ss_pred             CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCe
Confidence            3456789999999999999999                   1224567778888877 79999999998754     467


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++||||||.||+.-++++...+.++.|+
T Consensus        96 LWLVMEfC~gGSVTDLVKn~~g~rl~E~  123 (953)
T KOG0587|consen   96 LWLVMEFCGGGSVTDLVKNTKGNRLKEE  123 (953)
T ss_pred             EEEEeeccCCccHHHHHhhhcccchhhH
Confidence            9999999999999999998766666654

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.03  E-value=7.1e-11  Score=87.60  Aligned_cols=69  Identities=22%  Similarity=0.481  Sum_probs=60.3

Q ss_pred             eEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccC
Q 043174           76 FQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCP  134 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~  134 (156)
                      |...+.||+|+||.||+                     ...+.+.+|+.+++.++|+||+++++.+.+....|+||||++
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG   85 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence            45567789999999998                     122357899999999999999999999999999999999999


Q ss_pred             CCCHHHHHHh
Q 043174          135 GGDLLTVSQR  144 (156)
Q Consensus       135 ~g~L~~~l~~  144 (156)
                      +++|.+++..
T Consensus        86 ~~~L~~~~~~   95 (277)
T cd06642          86 GGSALDLLKP   95 (277)
T ss_pred             CCcHHHHhhc
Confidence            9999999875

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.03  E-value=1.7e-09  Score=87.23  Aligned_cols=72  Identities=15%  Similarity=0.200  Sum_probs=61.8

Q ss_pred             cCCCeEEEEEeccCCceEEEe--------------------------------------chhhhHHHHHHHHHhCCCCCC
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI--------------------------------------KKRNRVHIEKEILKMLDHPFL  113 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~--------------------------------------~~~~~~~~E~~~l~~~~h~~i  113 (156)
                      ..++|++++.||+|+||.||+                                      .....+.+|+.+|..++|+||
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence            357899999999999999995                                      012346789999999999999


Q ss_pred             CceeEEEEeCCeEEEEEeccCCCCHHHHHHh
Q 043174          114 PSLFAEFEASHYSRLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       114 v~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~  144 (156)
                      +++++++.+.+..|+++|++. ++|+.++..
T Consensus       226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~  255 (501)
T PHA03210        226 LKIEEILRSEANTYMITQKYD-FDLYSFMYD  255 (501)
T ss_pred             CcEeEEEEECCeeEEEEeccc-cCHHHHHhh
Confidence            999999999999999999985 588888765

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.03  E-value=7.9e-10  Score=81.89  Aligned_cols=73  Identities=30%  Similarity=0.467  Sum_probs=63.3

Q ss_pred             CCCeEEEEEeccCCceEEEe-----------------------c--hhhhHHHHHHHHHhCCCCCCCceeEEEEe--CCe
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-----------------------K--KRNRVHIEKEILKMLDHPFLPSLFAEFEA--SHY  125 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-----------------------~--~~~~~~~E~~~l~~~~h~~iv~l~~~~~~--~~~  125 (156)
                      ..+|++.+.||+|+||.||+                       .  ..+.+.+|+.+++.+.|+||+++++++..  ...
T Consensus         3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~   82 (284)
T cd05038           3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS   82 (284)
T ss_pred             hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence            35678889999999999996                       1  24568899999999999999999998877  557


Q ss_pred             EEEEEeccCCCCHHHHHHhc
Q 043174          126 SRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~  145 (156)
                      .+++|||+++|+|.+++...
T Consensus        83 ~~lv~e~~~~~~l~~~l~~~  102 (284)
T cd05038          83 LRLIMEYLPSGSLRDYLQRH  102 (284)
T ss_pred             eEEEEecCCCCCHHHHHHhC
Confidence            99999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.03  E-value=5.3e-10  Score=82.49  Aligned_cols=80  Identities=20%  Similarity=0.399  Sum_probs=64.4

Q ss_pred             CCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeC------CeEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEAS------HYSR  127 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~------~~~~  127 (156)
                      +.|.+.+.||+|+||.||+                   +....+..|+.++..+ +|+||+++++.+...      ..+|
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~   85 (272)
T cd06637           6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW   85 (272)
T ss_pred             hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEE
Confidence            5577888999999999998                   1234678899999988 799999999988753      4689


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++|||+++|+|.+++.......++++
T Consensus        86 iv~e~~~~~~L~~~l~~~~~~~l~~~  111 (272)
T cd06637          86 LVMEFCGAGSVTDLIKNTKGNTLKEE  111 (272)
T ss_pred             EEEEcCCCCcHHHHHHhccCCCCCHH
Confidence            99999999999999987533445543

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.02  E-value=1.4e-09  Score=81.15  Aligned_cols=72  Identities=24%  Similarity=0.272  Sum_probs=61.5

Q ss_pred             CCCeEEEEEeccCCceEEEe------------ch---------hhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------KK---------RNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~~---------~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      .++|.+.+.||+|+||.||+            |.         ...+.+|+.+++.++|+||+++++++.+....|++||
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   83 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE   83 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence            46799999999999999998            11         1246789999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhc
Q 043174          132 YCPGGDLLTVSQRQ  145 (156)
Q Consensus       132 ~~~~g~L~~~l~~~  145 (156)
                      |+. ++|..++...
T Consensus        84 ~~~-~~l~~~~~~~   96 (291)
T cd07870          84 YMH-TDLAQYMIQH   96 (291)
T ss_pred             ccc-CCHHHHHHhC
Confidence            996 6888777653

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.02  E-value=5e-10  Score=96.38  Aligned_cols=69  Identities=20%  Similarity=0.224  Sum_probs=58.6

Q ss_pred             eEEEEEeccCCceEEEe------------ch----hhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCHH
Q 043174           76 FQLFRRLGSGIIRSVYI------------KK----RNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLL  139 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~------------~~----~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~  139 (156)
                      +...+.||+|+||.||+            |.    ......|+++++.++|||||++++++.+++..|+||||+++|+|.
T Consensus       692 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~  771 (968)
T PLN00113        692 LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLS  771 (968)
T ss_pred             CCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHH
Confidence            45567899999999998            11    112356789999999999999999999999999999999999999


Q ss_pred             HHHHh
Q 043174          140 TVSQR  144 (156)
Q Consensus       140 ~~l~~  144 (156)
                      ++++.
T Consensus       772 ~~l~~  776 (968)
T PLN00113        772 EVLRN  776 (968)
T ss_pred             HHHhc
Confidence            99864

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.02  E-value=4.2e-10  Score=90.14  Aligned_cols=78  Identities=22%  Similarity=0.328  Sum_probs=69.1

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEE
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR  127 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~  127 (156)
                      ..+.+..+.+.+...||+|.||+||+                   .+.+.|.+|+.++++-+|-||+-+.|++..++. .
T Consensus       385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-A  463 (678)
T KOG0193|consen  385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHGDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-A  463 (678)
T ss_pred             cccccCHHHhhccceeccccccceeecccccceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-e
Confidence            44556667778889999999999999                   567899999999999999999999999987776 9


Q ss_pred             EEEeccCCCCHHHHHHhc
Q 043174          128 LVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~  145 (156)
                      ||..+|+|-+|+.+|...
T Consensus       464 IiTqwCeGsSLY~hlHv~  481 (678)
T KOG0193|consen  464 IITQWCEGSSLYTHLHVQ  481 (678)
T ss_pred             eeehhccCchhhhhccch
Confidence            999999999999998754

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.02  E-value=5.6e-10  Score=82.66  Aligned_cols=76  Identities=20%  Similarity=0.358  Sum_probs=63.9

Q ss_pred             CeEEEEEeccCCceEEEe------------c---------hhhhHHHHHHHHHhCC---CCCCCceeEEEEeCCeEEEEE
Q 043174           75 QFQLFRRLGSGIIRSVYI------------K---------KRNRVHIEKEILKMLD---HPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~------------~---------~~~~~~~E~~~l~~~~---h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      .|++.+.||+|+||.||+            |         ....+.+|+.+++.+.   |||++++++.+.+....+++|
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            477788999999999998            1         2345778999999886   999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||+++++|.++++.   +.+++.
T Consensus        82 e~~~~~~L~~~~~~---~~l~~~  101 (277)
T cd06917          82 EYAEGGSVRTLMKA---GPIAEK  101 (277)
T ss_pred             ecCCCCcHHHHHHc---cCCCHH
Confidence            99999999999875   345543

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.02  E-value=1.9e-09  Score=78.48  Aligned_cols=71  Identities=32%  Similarity=0.615  Sum_probs=63.5

Q ss_pred             CeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           75 QFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      +|.+.+.||.|+||.||+                      .....+..|+++++.++|+|++++.+.+.....+++++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            478899999999999998                      1234578899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhc
Q 043174          133 CPGGDLLTVSQRQ  145 (156)
Q Consensus       133 ~~~g~L~~~l~~~  145 (156)
                      +++++|.+++++.
T Consensus        81 ~~~~~L~~~l~~~   93 (258)
T cd08215          81 ADGGDLSQKIKKQ   93 (258)
T ss_pred             cCCCcHHHHHHHh
Confidence            9999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.02  E-value=1.8e-09  Score=78.95  Aligned_cols=71  Identities=27%  Similarity=0.545  Sum_probs=60.4

Q ss_pred             CeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe--CCeEEEEE
Q 043174           75 QFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA--SHYSRLVI  130 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~--~~~~~lv~  130 (156)
                      +|++.+.||.|+||.||+                      ...+.+..|+.+++.++|+||+++++.+..  ...++++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            478899999999999997                      123457789999999999999999987754  45789999


Q ss_pred             eccCCCCHHHHHHhc
Q 043174          131 EYCPGGDLLTVSQRQ  145 (156)
Q Consensus       131 E~~~~g~L~~~l~~~  145 (156)
                      ||+++++|.+++...
T Consensus        81 e~~~~~~L~~~l~~~   95 (265)
T cd08217          81 EYCEGGDLAQLIQKC   95 (265)
T ss_pred             hhccCCCHHHHHHHH
Confidence            999999999999763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.02  E-value=7.5e-10  Score=81.72  Aligned_cols=72  Identities=17%  Similarity=0.233  Sum_probs=58.8

Q ss_pred             EeccCCceEEEe--------------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           81 RLGSGIIRSVYI--------------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        81 ~lG~G~~g~V~~--------------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      .||+|+||.||+                                .....+..|+.++..++||||+++++++.+....++
T Consensus         2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l   81 (262)
T cd05077           2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM   81 (262)
T ss_pred             ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence            589999999997                                112256778889999999999999999999889999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +|||+++|.|..++.+. ...+++.
T Consensus        82 v~e~~~~~~l~~~~~~~-~~~~~~~  105 (262)
T cd05077          82 VEEFVEFGPLDLFMHRK-SDVLTTP  105 (262)
T ss_pred             EEecccCCCHHHHHHhc-CCCCCHH
Confidence            99999999999988764 2345543

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.01  E-value=7e-10  Score=81.46  Aligned_cols=72  Identities=21%  Similarity=0.392  Sum_probs=63.5

Q ss_pred             CCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           74 DQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      ++|++.+.||+|+||.||+                     .....+.+|+.+++.+.||||+++++.+.....+++++||
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            3577888999999999999                     1224578899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhc
Q 043174          133 CPGGDLLTVSQRQ  145 (156)
Q Consensus       133 ~~~g~L~~~l~~~  145 (156)
                      +++++|.+++...
T Consensus        81 ~~~~~L~~~~~~~   93 (265)
T cd06605          81 MDGGSLDKILKEV   93 (265)
T ss_pred             cCCCcHHHHHHHc
Confidence            9999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.01  E-value=1.6e-09  Score=80.44  Aligned_cols=70  Identities=26%  Similarity=0.363  Sum_probs=61.4

Q ss_pred             CeEEEEEeccCCceEEEe------------c---------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           75 QFQLFRRLGSGIIRSVYI------------K---------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~------------~---------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      +|++.+.||.|++|.||+            |         ....+.+|+.+++.++|+||+++++.+.+.+.++++|||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            488999999999999998            1         1245678999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhc
Q 043174          134 PGGDLLTVSQRQ  145 (156)
Q Consensus       134 ~~g~L~~~l~~~  145 (156)
                      ++ +|.+++...
T Consensus        81 ~~-~l~~~~~~~   91 (284)
T cd07836          81 DK-DLKKYMDTH   91 (284)
T ss_pred             Cc-cHHHHHHhc
Confidence            85 899988764

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.01  E-value=4.8e-10  Score=82.26  Aligned_cols=70  Identities=31%  Similarity=0.549  Sum_probs=60.5

Q ss_pred             CeEEEEEeccCCceEEEe---------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEE
Q 043174           75 QFQLFRRLGSGIIRSVYI---------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~---------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      .|.+.+.||+|+||.||+               +          ....+..|+.+++.++||||+++++.+.+....+++
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            378889999999999997               0          112356788999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHHh
Q 043174          130 IEYCPGGDLLTVSQR  144 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~  144 (156)
                      +||+++++|..++..
T Consensus        81 ~e~~~~~~l~~~~~~   95 (260)
T cd08222          81 TEYCEGRDLDCKLEE   95 (260)
T ss_pred             EEeCCCCCHHHHHHH
Confidence            999999999998865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.00  E-value=2.3e-09  Score=77.88  Aligned_cols=77  Identities=23%  Similarity=0.407  Sum_probs=66.4

Q ss_pred             CeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC--CeEEEEE
Q 043174           75 QFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS--HYSRLVI  130 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~--~~~~lv~  130 (156)
                      +|.+.+.||+|++|.||+                      ...+.+.+|+.+++.++|+||+++++.+.+.  ..+++++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            477889999999999999                      1245688999999999999999999999988  8999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||+++++|.+++.+.  ..+++.
T Consensus        81 e~~~~~~L~~~~~~~--~~~~~~  101 (260)
T cd06606          81 EYVSGGSLSSLLKKF--GKLPEP  101 (260)
T ss_pred             EecCCCcHHHHHHHc--CCCCHH
Confidence            999999999999875  355543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.00  E-value=1e-09  Score=80.66  Aligned_cols=70  Identities=33%  Similarity=0.615  Sum_probs=59.2

Q ss_pred             eccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCH
Q 043174           82 LGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDL  138 (156)
Q Consensus        82 lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L  138 (156)
                      ||.|+||.||+                       ...+.+.+|+.+++.++||||+++++.+.++..+++++||+++|+|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            68888888888                       1224578899999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCCC
Q 043174          139 LTVSQRQRRLRFSIP  153 (156)
Q Consensus       139 ~~~l~~~~~~~~~e~  153 (156)
                      .+++.+.  ..+++.
T Consensus        81 ~~~l~~~--~~l~~~   93 (262)
T cd05572          81 WTILRDR--GLFDEY   93 (262)
T ss_pred             HHHHhhc--CCCCHH
Confidence            9999875  445543

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=98.99  E-value=6.1e-10  Score=82.73  Aligned_cols=78  Identities=22%  Similarity=0.319  Sum_probs=64.3

Q ss_pred             CeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           75 QFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      +|++.+.||+|+||.||+            +          ....+.+|+.+++.++|+||+++++++.+...+++++||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            478899999999999998            1          113467899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ++ ++|.+++... .+.+++..
T Consensus        81 ~~-~~l~~~~~~~-~~~~~~~~  100 (284)
T cd07839          81 CD-QDLKKYFDSC-NGDIDPEI  100 (284)
T ss_pred             CC-CCHHHHHHhc-CCCCCHHH
Confidence            97 5888888754 24566543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.99  E-value=1e-09  Score=81.58  Aligned_cols=81  Identities=20%  Similarity=0.411  Sum_probs=65.0

Q ss_pred             CCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEe------CCeE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEA------SHYS  126 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~------~~~~  126 (156)
                      .+.|++.+.||.|+||.||+                   .....+..|+.++..+ +|+||+++++.+..      ...+
T Consensus        15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   94 (282)
T cd06636          15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQL   94 (282)
T ss_pred             hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEE
Confidence            46788899999999999998                   1234577888888888 79999999998853      4578


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |++|||+++|+|.+++.......+++.
T Consensus        95 ~iv~e~~~~~~L~~~~~~~~~~~~~~~  121 (282)
T cd06636          95 WLVMEFCGAGSVTDLVKNTKGNALKED  121 (282)
T ss_pred             EEEEEeCCCCcHHHHHHHccCCCCCHH
Confidence            999999999999999987533445543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=98.99  E-value=1.4e-09  Score=80.15  Aligned_cols=70  Identities=21%  Similarity=0.259  Sum_probs=58.4

Q ss_pred             eEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe-----
Q 043174           76 FQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY-----  125 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~-----  125 (156)
                      |++.+.||+|+||.||.                         .....+.+|+.+++.++||||+++++.+.....     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            46788999999999996                         112357889999999999999999998765443     


Q ss_pred             -EEEEEeccCCCCHHHHHHhc
Q 043174          126 -SRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       126 -~~lv~E~~~~g~L~~~l~~~  145 (156)
                       .+++|||+++|+|..++...
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~  101 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYS  101 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHh
Confidence             89999999999999998653

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=98.99  E-value=1.1e-09  Score=80.66  Aligned_cols=71  Identities=27%  Similarity=0.418  Sum_probs=57.2

Q ss_pred             EeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCC
Q 043174           81 RLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGD  137 (156)
Q Consensus        81 ~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~  137 (156)
                      .||+|+||.||+                       ...+.+.+|+.++..++|+||+++++++. ....++||||+++|+
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence            389999999985                       11245788999999999999999999876 457899999999999


Q ss_pred             HHHHHHhcCCCCCCCC
Q 043174          138 LLTVSQRQRRLRFSIP  153 (156)
Q Consensus       138 L~~~l~~~~~~~~~e~  153 (156)
                      |.+++... ...+++.
T Consensus        81 L~~~l~~~-~~~~~~~   95 (257)
T cd05115          81 LNKFLSGK-KDEITVS   95 (257)
T ss_pred             HHHHHHhC-CCCCCHH
Confidence            99999754 2445543

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=98.98  E-value=1.1e-09  Score=79.81  Aligned_cols=69  Identities=30%  Similarity=0.501  Sum_probs=61.5

Q ss_pred             EEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           77 QLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        77 ~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      .+.+.||.|+||.||+                         .....+..|+.++..++|+||+++++.+.+.+..+++||
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            5678899999999987                         034578889999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhc
Q 043174          132 YCPGGDLLTVSQRQ  145 (156)
Q Consensus       132 ~~~~g~L~~~l~~~  145 (156)
                      |+++++|.++++..
T Consensus        82 ~~~~~~l~~~~~~~   95 (258)
T smart00219       82 YMEGGDLLDYLRKN   95 (258)
T ss_pred             ccCCCCHHHHHHhh
Confidence            99999999999865

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=98.98  E-value=1.5e-09  Score=80.01  Aligned_cols=65  Identities=25%  Similarity=0.421  Sum_probs=57.0

Q ss_pred             EeccCCceEEEe---------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           81 RLGSGIIRSVYI---------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        81 ~lG~G~~g~V~~---------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      .||+|+||.||+                           .....+.+|+.+++.++||||+++++++.+....+++|||+
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM   81 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence            589999999996                           11235678999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhc
Q 043174          134 PGGDLLTVSQRQ  145 (156)
Q Consensus       134 ~~g~L~~~l~~~  145 (156)
                      ++|+|.+++.+.
T Consensus        82 ~~~~L~~~l~~~   93 (269)
T cd05044          82 EGGDLLSYLRDA   93 (269)
T ss_pred             CCCcHHHHHHHh
Confidence            999999999764

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.97  E-value=3e-09  Score=79.31  Aligned_cols=79  Identities=23%  Similarity=0.275  Sum_probs=60.3

Q ss_pred             CCeEEEEEeccCCceEEEe-------------c----------hhhhHHHHHHHHHhC---CCCCCCceeEEEE-----e
Q 043174           74 DQFQLFRRLGSGIIRSVYI-------------K----------KRNRVHIEKEILKML---DHPFLPSLFAEFE-----A  122 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-------------~----------~~~~~~~E~~~l~~~---~h~~iv~l~~~~~-----~  122 (156)
                      ++|.+.+.||+|+||.||+             |          ....+.+|+.++..+   .||||+++++++.     .
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            3688999999999999998             1          112456788877765   6999999999875     2


Q ss_pred             CCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          123 SHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       123 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ...++++|||++ ++|.+++.......+++.
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~  110 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTE  110 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhCCCCCCCHH
Confidence            456999999997 699999986533445543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=98.97  E-value=2.5e-09  Score=79.35  Aligned_cols=81  Identities=21%  Similarity=0.303  Sum_probs=65.5

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      +..++|++.+.||+|+||.||+                         ...+.+.+|+.++..++|+||+++++.+.. ..
T Consensus         4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~   82 (279)
T cd05109           4 LKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-ST   82 (279)
T ss_pred             cchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CC
Confidence            4567899999999999999997                         112346788999999999999999998865 45


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      .++++||+++|+|.++++.. .+.+++.
T Consensus        83 ~~l~~~~~~~g~l~~~l~~~-~~~~~~~  109 (279)
T cd05109          83 VQLVTQLMPYGCLLDYVREN-KDRIGSQ  109 (279)
T ss_pred             cEEEEEcCCCCCHHHHHhhc-cCCCCHH
Confidence            78999999999999999864 2445543

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=98.97  E-value=3.6e-09  Score=78.53  Aligned_cols=75  Identities=16%  Similarity=0.151  Sum_probs=63.8

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe-CC
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA-SH  124 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~-~~  124 (156)
                      +..++|.+.+.||+|+||.||+                         ...+.+.+|+.++..+.|+||+++++++.. ..
T Consensus         3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~   82 (280)
T cd05043           3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE   82 (280)
T ss_pred             cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence            3457899999999999999998                         113457889999999999999999997655 57


Q ss_pred             eEEEEEeccCCCCHHHHHHhc
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ..++++||+++|+|.+++...
T Consensus        83 ~~~~~~~~~~~~~L~~~l~~~  103 (280)
T cd05043          83 PPFVLYPYMNWGNLKLFLQQC  103 (280)
T ss_pred             CCEEEEEcCCCCcHHHHHHhc
Confidence            799999999999999999764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=98.96  E-value=1.8e-09  Score=79.30  Aligned_cols=70  Identities=23%  Similarity=0.325  Sum_probs=57.5

Q ss_pred             EeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCC
Q 043174           81 RLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGG  136 (156)
Q Consensus        81 ~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g  136 (156)
                      .||+|+||.||+                        ...+.+.+|+.++..+.||||+++++.+. .+..+++|||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            589999999986                        12345788999999999999999999875 45678999999999


Q ss_pred             CHHHHHHhcCCCCCCCC
Q 043174          137 DLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       137 ~L~~~l~~~~~~~~~e~  153 (156)
                      +|.++++..  +.++++
T Consensus        81 ~L~~~l~~~--~~~~~~   95 (257)
T cd05116          81 PLNKFLQKN--KHVTEK   95 (257)
T ss_pred             cHHHHHHhc--CCCCHH
Confidence            999999864  556554

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.95  E-value=7.3e-10  Score=90.54  Aligned_cols=69  Identities=20%  Similarity=0.376  Sum_probs=63.5

Q ss_pred             EeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCHHH
Q 043174           81 RLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLT  140 (156)
Q Consensus        81 ~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~~  140 (156)
                      +||+|.||+||.                    +..+.+..||...+.++|.|||++.|.+...+++-|+||-++||+|-.
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs  661 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS  661 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence            799999999999                    345678999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCC
Q 043174          141 VSQRQRRLRF  150 (156)
Q Consensus       141 ~l~~~~~~~~  150 (156)
                      +|+.. +|.+
T Consensus       662 LLrsk-WGPl  670 (1226)
T KOG4279|consen  662 LLRSK-WGPL  670 (1226)
T ss_pred             HHHhc-cCCC
Confidence            99976 6776

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=98.95  E-value=3.6e-09  Score=85.27  Aligned_cols=75  Identities=25%  Similarity=0.325  Sum_probs=61.7

Q ss_pred             ccCCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCC----
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASH----  124 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~----  124 (156)
                      ...++|.+.+.||+|+||.||+            |          ....+.+|+.++..++|+||++++..+....    
T Consensus        29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            3457899999999999999998            1          1235778999999999999999988765432    


Q ss_pred             ----eEEEEEeccCCCCHHHHHHhc
Q 043174          125 ----YSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       125 ----~~~lv~E~~~~g~L~~~l~~~  145 (156)
                          .+++||||+++|+|.++|+.+
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~~~l~~~  133 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLRQEIKSR  133 (496)
T ss_pred             ccceEEEEEEeCCCCCcHHHHHHHh
Confidence                378999999999999999753

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.95  E-value=1.6e-09  Score=79.19  Aligned_cols=65  Identities=22%  Similarity=0.310  Sum_probs=55.5

Q ss_pred             EEeccCCceEEEe------c-----------------------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           80 RRLGSGIIRSVYI------K-----------------------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        80 ~~lG~G~~g~V~~------~-----------------------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      +.||+|+||.||+      .                       ....+.+|+.+++.++||||+++++.+.. ...+++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~   79 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE   79 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence            3689999999986      0                       02457789999999999999999998877 7789999


Q ss_pred             eccCCCCHHHHHHhc
Q 043174          131 EYCPGGDLLTVSQRQ  145 (156)
Q Consensus       131 E~~~~g~L~~~l~~~  145 (156)
                      ||+++|+|.+++...
T Consensus        80 e~~~~~~L~~~l~~~   94 (259)
T cd05037          80 EYVKFGPLDVFLHRE   94 (259)
T ss_pred             EcCCCCcHHHHHHhh
Confidence            999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=98.95  E-value=1.6e-09  Score=81.56  Aligned_cols=74  Identities=27%  Similarity=0.370  Sum_probs=61.9

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      +..++|+..+.||+|+||.||+                         .....+.+|+.++..++||||+++++.+... .
T Consensus         4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~   82 (303)
T cd05110           4 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-T   82 (303)
T ss_pred             cchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-C
Confidence            4457789999999999999997                         0112467899999999999999999988754 4


Q ss_pred             EEEEEeccCCCCHHHHHHhc
Q 043174          126 SRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~  145 (156)
                      .++++||+++|+|.+++...
T Consensus        83 ~~~v~e~~~~g~l~~~~~~~  102 (303)
T cd05110          83 IQLVTQLMPHGCLLDYVHEH  102 (303)
T ss_pred             ceeeehhcCCCCHHHHHHhc
Confidence            67999999999999999865

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.95  E-value=6.1e-09  Score=82.74  Aligned_cols=74  Identities=20%  Similarity=0.250  Sum_probs=58.3

Q ss_pred             CccCCCeEEEEEeccCCceEEEe------------c----hhhhHHHHHHHHHhCCCCCCCceeEEEEeC--------Ce
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI------------K----KRNRVHIEKEILKMLDHPFLPSLFAEFEAS--------HY  125 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~------------~----~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~--------~~  125 (156)
                      .....+|.+.+.||+|+||.||+            |    ......+|+.+|+.++||||+++++++...        ..
T Consensus        62 ~~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~  141 (440)
T PTZ00036         62 RSPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIF  141 (440)
T ss_pred             cCcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceE
Confidence            33457899999999999999998            1    123456799999999999999998876442        25


Q ss_pred             EEEEEeccCCCCHHHHHHh
Q 043174          126 SRLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~  144 (156)
                      ++++|||+++ +|.+++..
T Consensus       142 l~lvmE~~~~-~l~~~~~~  159 (440)
T PTZ00036        142 LNVVMEFIPQ-TVHKYMKH  159 (440)
T ss_pred             EEEEEecCCc-cHHHHHHH
Confidence            7899999985 77777653

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=98.94  E-value=2e-09  Score=78.72  Aligned_cols=65  Identities=28%  Similarity=0.357  Sum_probs=56.7

Q ss_pred             EEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           80 RRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        80 ~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      +.||+|+||.||+                        ...+.+.+|+.+++.++||||+++++.+.+ ..++++|||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            3589999999987                        113457889999999999999999999988 899999999999


Q ss_pred             CCHHHHHHhc
Q 043174          136 GDLLTVSQRQ  145 (156)
Q Consensus       136 g~L~~~l~~~  145 (156)
                      |+|.+++.+.
T Consensus        80 ~~L~~~l~~~   89 (257)
T cd05040          80 GSLLDRLRKD   89 (257)
T ss_pred             CcHHHHHHhc
Confidence            9999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=98.94  E-value=2.4e-09  Score=79.71  Aligned_cols=74  Identities=20%  Similarity=0.387  Sum_probs=65.9

Q ss_pred             cCCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      ..+.|...+.||+|+||.||+                   ...+.+.+|+.++..++|+||+++++.+......++++||
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   96 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEY   96 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEec
Confidence            456688889999999999998                   1134678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhc
Q 043174          133 CPGGDLLTVSQRQ  145 (156)
Q Consensus       133 ~~~g~L~~~l~~~  145 (156)
                      +++++|.+++...
T Consensus        97 ~~~~~L~~~l~~~  109 (286)
T cd06614          97 MDGGSLTDIITQN  109 (286)
T ss_pred             cCCCcHHHHHHHh
Confidence            9999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.94  E-value=8.6e-09  Score=76.95  Aligned_cols=73  Identities=26%  Similarity=0.504  Sum_probs=61.5

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------c-------hhhhHHHHHHHHHhC-CCCCCCceeEEEEeC-----CeE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------K-------KRNRVHIEKEILKML-DHPFLPSLFAEFEAS-----HYS  126 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------~-------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~-----~~~  126 (156)
                      ..++|.+.+.||+|+||.||+            +       ....+.+|+.++..+ +||||+++++.+...     ...
T Consensus        20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~   99 (291)
T cd06639          20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQL   99 (291)
T ss_pred             CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCee
Confidence            368899999999999999998            1       123567799999988 899999999988653     368


Q ss_pred             EEEEeccCCCCHHHHHHh
Q 043174          127 RLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~  144 (156)
                      +++|||+++|+|.++++.
T Consensus       100 ~lv~ey~~~~sL~~~~~~  117 (291)
T cd06639         100 WLVLELCNGGSVTELVKG  117 (291)
T ss_pred             EEEEEECCCCcHHHHHHH
Confidence            999999999999999864

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.94  E-value=4.6e-09  Score=78.42  Aligned_cols=71  Identities=24%  Similarity=0.359  Sum_probs=59.5

Q ss_pred             CCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCe-----
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKML-DHPFLPSLFAEFEASHY-----  125 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~-----  125 (156)
                      ++|++.+.||+|+||.||+            |          ....+.+|+.++..+ +|+||+++++++.....     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            4689999999999999999            1          123577899999999 56999999999887665     


Q ss_pred             EEEEEeccCCCCHHHHHHhc
Q 043174          126 SRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +|++|||+++ +|.+++...
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~   99 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSN   99 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHh
Confidence            8999999985 899988754

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=98.93  E-value=7.6e-10  Score=82.26  Aligned_cols=72  Identities=21%  Similarity=0.344  Sum_probs=62.3

Q ss_pred             CCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      ..+|.+.+.||+|+||.||+                          ...+.+..|+.++..++||||+++++++.+...+
T Consensus         4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~   83 (283)
T cd05091           4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL   83 (283)
T ss_pred             HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence            45577888999999999997                          0123477899999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHh
Q 043174          127 RLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~  144 (156)
                      ++++||+++++|.+++..
T Consensus        84 ~~~~e~~~~~~l~~~l~~  101 (283)
T cd05091          84 SMIFSYCSHSDLHEFLVM  101 (283)
T ss_pred             EEEEEcCCCCcHHHHHHh
Confidence            999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=98.93  E-value=3.3e-09  Score=79.95  Aligned_cols=79  Identities=24%  Similarity=0.369  Sum_probs=64.2

Q ss_pred             CCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      ...|.+.+.||+|+||.||+                       +..+.+.+|+.++..++||||+++++++.+.+..++|
T Consensus        14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv   93 (307)
T cd06607          14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV   93 (307)
T ss_pred             chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence            45588899999999999998                       1123577899999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCC
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +||++ |+|.+++... .+.+++.
T Consensus        94 ~e~~~-g~l~~~~~~~-~~~l~~~  115 (307)
T cd06607          94 MEYCL-GSASDILEVH-KKPLQEV  115 (307)
T ss_pred             HHhhC-CCHHHHHHHc-ccCCCHH
Confidence            99997 5787777643 2345443

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.93  E-value=3.1e-09  Score=81.53  Aligned_cols=77  Identities=25%  Similarity=0.326  Sum_probs=62.7

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCC------
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASH------  124 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~------  124 (156)
                      .++|++.+.||+|+||.||+            |          ....+.+|+.+++.++||||+++++++....      
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07880          14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFH   93 (343)
T ss_pred             ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccc
Confidence            56799999999999999998            1          1234778999999999999999999887654      


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      .++++|||+ +++|..++..   ..++++
T Consensus        94 ~~~lv~e~~-~~~l~~~~~~---~~l~~~  118 (343)
T cd07880          94 DFYLVMPFM-GTDLGKLMKH---EKLSED  118 (343)
T ss_pred             eEEEEEecC-CCCHHHHHhc---CCCCHH
Confidence            358999998 6799888865   356554

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=98.93  E-value=2.9e-09  Score=78.08  Aligned_cols=70  Identities=26%  Similarity=0.394  Sum_probs=57.4

Q ss_pred             EEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           80 RRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        80 ~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      +.||+|+||.||+                        ...+.+.+|+.+++.+.|+||+++++++. ....+++|||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            3689999999986                        12345788999999999999999999876 4568999999999


Q ss_pred             CCHHHHHHhcCCCCCCC
Q 043174          136 GDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       136 g~L~~~l~~~~~~~~~e  152 (156)
                      |+|.++|.+.  ..+++
T Consensus        80 ~~L~~~l~~~--~~~~~   94 (257)
T cd05060          80 GPLLKYLKKR--REIPV   94 (257)
T ss_pred             CcHHHHHHhC--CCCCH
Confidence            9999999875  34544

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.91  E-value=8e-09  Score=74.74  Aligned_cols=71  Identities=25%  Similarity=0.545  Sum_probs=63.9

Q ss_pred             CeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccC
Q 043174           75 QFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCP  134 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~  134 (156)
                      +|.+.+.||+|++|.||+                    +....+.+|+.++..++|+||+++++.+......++++||++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   80 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS   80 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            478889999999999999                    134568899999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhc
Q 043174          135 GGDLLTVSQRQ  145 (156)
Q Consensus       135 ~g~L~~~l~~~  145 (156)
                      +++|.+++...
T Consensus        81 ~~~L~~~~~~~   91 (253)
T cd05122          81 GGSLKDLLKST   91 (253)
T ss_pred             CCcHHHHHhhc
Confidence            99999999774

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.91  E-value=3.8e-09  Score=77.02  Aligned_cols=70  Identities=33%  Similarity=0.510  Sum_probs=62.1

Q ss_pred             CeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           75 QFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      +|++.+.||+|+||.||+                      .....+..|+.+++.++|+||+++++.+.+....++++||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            478899999999999998                      1123567899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHh
Q 043174          133 CPGGDLLTVSQR  144 (156)
Q Consensus       133 ~~~g~L~~~l~~  144 (156)
                      +++++|.+++.+
T Consensus        81 ~~~~~L~~~~~~   92 (256)
T cd08530          81 APFGDLSKAISK   92 (256)
T ss_pred             cCCCCHHHHHHH
Confidence            999999999876

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.91  E-value=3e-09  Score=79.87  Aligned_cols=66  Identities=21%  Similarity=0.400  Sum_probs=58.1

Q ss_pred             EEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCH
Q 043174           79 FRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDL  138 (156)
Q Consensus        79 ~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L  138 (156)
                      ...||+|+||.||+                    .....+.+|+.+++.++|+||+++++.+...+..+++|||+++++|
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  104 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL  104 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence            35789999999998                    1233578899999999999999999999999999999999999999


Q ss_pred             HHHHHh
Q 043174          139 LTVSQR  144 (156)
Q Consensus       139 ~~~l~~  144 (156)
                      .+++..
T Consensus       105 ~~~~~~  110 (292)
T cd06657         105 TDIVTH  110 (292)
T ss_pred             HHHHhc
Confidence            998865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.91  E-value=2.5e-09  Score=79.20  Aligned_cols=79  Identities=20%  Similarity=0.342  Sum_probs=57.7

Q ss_pred             CCeEEEEE--eccCCceEEEe------------chh---hhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           74 DQFQLFRR--LGSGIIRSVYI------------KKR---NRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        74 ~~~~~~~~--lG~G~~g~V~~------------~~~---~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      ++|.+.+.  ||+|+||.||+            +..   .....|+.+...+ +||||+++++.+...+.+++||||+++
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~   93 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKD   93 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchhhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCC
Confidence            44555554  59999999998            111   1111234333333 799999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCCCCCC
Q 043174          136 GDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       136 g~L~~~l~~~~~~~~~e~~  154 (156)
                      |+|.++++..  +.++++.
T Consensus        94 ~~L~~~l~~~--~~l~~~~  110 (267)
T PHA03390         94 GDLFDLLKKE--GKLSEAE  110 (267)
T ss_pred             CcHHHHHHhc--CCCCHHH
Confidence            9999999875  4666544

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.91  E-value=9.2e-10  Score=82.59  Aligned_cols=77  Identities=19%  Similarity=0.362  Sum_probs=63.4

Q ss_pred             CCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           74 DQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      +.|.....||+|+||.||+                    ...+.+.+|+.+++.++|+||+++++.+...+..+++|||+
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~  101 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFL  101 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCC
Confidence            3345556799999999998                    12345788999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCCCC
Q 043174          134 PGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++++|.+++..   +.++++
T Consensus       102 ~~~~L~~~~~~---~~l~~~  118 (292)
T cd06658         102 EGGALTDIVTH---TRMNEE  118 (292)
T ss_pred             CCCcHHHHHhc---CCCCHH
Confidence            99999998865   345543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.91  E-value=2.4e-09  Score=81.59  Aligned_cols=72  Identities=15%  Similarity=0.268  Sum_probs=58.7

Q ss_pred             EeccC--CceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCC
Q 043174           81 RLGSG--IIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGG  136 (156)
Q Consensus        81 ~lG~G--~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g  136 (156)
                      .||+|  +||.||+                      +..+.+.+|+.++..++||||+++++++..++.+++++||+.+|
T Consensus         5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~   84 (328)
T cd08226           5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG   84 (328)
T ss_pred             HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence            45666  8888988                      12356788999999999999999999999999999999999999


Q ss_pred             CHHHHHHhcCCCCCCC
Q 043174          137 DLLTVSQRQRRLRFSI  152 (156)
Q Consensus       137 ~L~~~l~~~~~~~~~e  152 (156)
                      +|.+++++.....+++
T Consensus        85 ~l~~~l~~~~~~~~~~  100 (328)
T cd08226          85 SANSLLKTYFPEGMSE  100 (328)
T ss_pred             CHHHHHHhhcccCCCH
Confidence            9999998752233444

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.91  E-value=1.4e-09  Score=81.86  Aligned_cols=71  Identities=17%  Similarity=0.361  Sum_probs=60.7

Q ss_pred             CCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           74 DQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      ..|.....||+|+||.||+                    ...+.+.+|+.++..++||||+++++.+...+..|+++||+
T Consensus        21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~  100 (297)
T cd06659          21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFL  100 (297)
T ss_pred             hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecC
Confidence            3344455799999999998                    12346788999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHh
Q 043174          134 PGGDLLTVSQR  144 (156)
Q Consensus       134 ~~g~L~~~l~~  144 (156)
                      ++++|..++..
T Consensus       101 ~~~~L~~~~~~  111 (297)
T cd06659         101 QGGALTDIVSQ  111 (297)
T ss_pred             CCCCHHHHHhh
Confidence            99999998865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=98.90  E-value=2.7e-10  Score=79.53  Aligned_cols=75  Identities=21%  Similarity=0.321  Sum_probs=61.8

Q ss_pred             CeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           75 QFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      .|...++||+|.||+|++            +          ......+||.+++.+.|.|||+++++...+..+-+|+||
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            456667899999999999            1          123579999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFS  151 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~  151 (156)
                      |. .+|..+.... .+.++
T Consensus        83 cd-qdlkkyfdsl-ng~~d   99 (292)
T KOG0662|consen   83 CD-QDLKKYFDSL-NGDLD   99 (292)
T ss_pred             hh-HHHHHHHHhc-CCcCC
Confidence            97 4888887654 34443

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.90  E-value=8.4e-09  Score=77.77  Aligned_cols=79  Identities=29%  Similarity=0.379  Sum_probs=63.3

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------ch----------hhhHHHHHHHHHhCCCCCCCceeEEEEeC--CeEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------KK----------RNRVHIEKEILKMLDHPFLPSLFAEFEAS--HYSR  127 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------~~----------~~~~~~E~~~l~~~~h~~iv~l~~~~~~~--~~~~  127 (156)
                      ..++|++.+.||+|+||.||+            |.          ...+.+|+.++..++|+||+++++++...  +.++
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF   84 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence            467899999999999999998            11          12356899999999999999999998764  5699


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      +||||+. ++|.+++... ...+++
T Consensus        85 lv~e~~~-~~l~~~l~~~-~~~l~~  107 (309)
T cd07845          85 LVMEYCE-QDLASLLDNM-PTPFSE  107 (309)
T ss_pred             EEEecCC-CCHHHHHHhc-ccCCCH
Confidence            9999997 4898888764 234544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.90  E-value=6.1e-09  Score=77.77  Aligned_cols=69  Identities=22%  Similarity=0.435  Sum_probs=60.4

Q ss_pred             eEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           76 FQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      |...+.||+|++|.||+                    ...+.+.+|+.+++.++||||+++++.+...+..++++||+++
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            44456899999999998                    1223578899999999999999999999999999999999999


Q ss_pred             CCHHHHHHh
Q 043174          136 GDLLTVSQR  144 (156)
Q Consensus       136 g~L~~~l~~  144 (156)
                      ++|.+++..
T Consensus       101 ~~L~~~~~~  109 (285)
T cd06648         101 GALTDIVTH  109 (285)
T ss_pred             CCHHHHHHh
Confidence            999999876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=98.90  E-value=5.2e-09  Score=76.30  Aligned_cols=66  Identities=32%  Similarity=0.520  Sum_probs=58.3

Q ss_pred             EEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCHH
Q 043174           80 RRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLL  139 (156)
Q Consensus        80 ~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~  139 (156)
                      +.||+|+||.||+                    +....+..|+.+++.+.|+||+++++.+.+....+++|||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            3689999999997                    12346788999999999999999999999999999999999999999


Q ss_pred             HHHHhc
Q 043174          140 TVSQRQ  145 (156)
Q Consensus       140 ~~l~~~  145 (156)
                      +++.+.
T Consensus        81 ~~l~~~   86 (251)
T cd05041          81 TFLRKK   86 (251)
T ss_pred             HHHHhc
Confidence            999764

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.90  E-value=1.9e-09  Score=80.60  Aligned_cols=79  Identities=24%  Similarity=0.308  Sum_probs=64.0

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC--CeEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS--HYSRL  128 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~--~~~~l  128 (156)
                      .++|++.+.||+|+||.||+            +          ....+.+|+.++..++||||+++++++...  ..+|+
T Consensus         4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l   83 (293)
T cd07843           4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM   83 (293)
T ss_pred             hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence            45788899999999999999            1          012356899999999999999999998887  89999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +|||++ ++|.+++... ...+++.
T Consensus        84 v~e~~~-~~L~~~~~~~-~~~l~~~  106 (293)
T cd07843          84 VMEYVE-HDLKSLMETM-KQPFLQS  106 (293)
T ss_pred             EehhcC-cCHHHHHHhc-cCCCCHH
Confidence            999998 4999998765 2335543

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=98.90  E-value=7.8e-10  Score=83.78  Aligned_cols=69  Identities=32%  Similarity=0.551  Sum_probs=56.8

Q ss_pred             CeEEEEEeccCCceEEEe----------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe--CC---eEEEEEecc
Q 043174           75 QFQLFRRLGSGIIRSVYI----------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA--SH---YSRLVIEYC  133 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~----------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~--~~---~~~lv~E~~  133 (156)
                      .|.-.+++|.|+||.||+                ...+...+|.++|+.+.|||||+|..+|..  +.   .+.+||||+
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym  104 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM  104 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc
Confidence            367788999999999999                223456889999999999999999887754  22   456899999


Q ss_pred             CCCCHHHHHHh
Q 043174          134 PGGDLLTVSQR  144 (156)
Q Consensus       134 ~~g~L~~~l~~  144 (156)
                      |. +|+..++.
T Consensus       105 P~-tL~~~~r~  114 (364)
T KOG0658|consen  105 PE-TLYRVIRH  114 (364)
T ss_pred             hH-HHHHHHHH
Confidence            85 99999984

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.90  E-value=4.7e-09  Score=77.37  Aligned_cols=70  Identities=24%  Similarity=0.383  Sum_probs=58.7

Q ss_pred             CeEEEEEeccCCceEEEe-------------c------------------hhhhHHHHHHHHHh-CCCCCCCceeEEEEe
Q 043174           75 QFQLFRRLGSGIIRSVYI-------------K------------------KRNRVHIEKEILKM-LDHPFLPSLFAEFEA  122 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~-------------~------------------~~~~~~~E~~~l~~-~~h~~iv~l~~~~~~  122 (156)
                      +|++.+.||+|+||.||+             +                  ....+..|+.++.. ++|+||+++++.+..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            477888999999999998             0                  11235678887765 699999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHHHh
Q 043174          123 SHYSRLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       123 ~~~~~lv~E~~~~g~L~~~l~~  144 (156)
                      .+..+++|||+++++|.+++..
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~  102 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNS  102 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHH
Confidence            9999999999999999998854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=98.89  E-value=5.7e-09  Score=76.07  Aligned_cols=66  Identities=32%  Similarity=0.532  Sum_probs=58.4

Q ss_pred             EEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           80 RRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        80 ~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      +.||+|+||.||+                        ...+.+.+|+.++..++|+||+++++++.+...++++|||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            3689999999988                        0145678899999999999999999999999999999999999


Q ss_pred             CCHHHHHHhc
Q 043174          136 GDLLTVSQRQ  145 (156)
Q Consensus       136 g~L~~~l~~~  145 (156)
                      |+|.++++..
T Consensus        81 ~~L~~~l~~~   90 (262)
T cd00192          81 GDLLDYLRKS   90 (262)
T ss_pred             CcHHHHHhhc
Confidence            9999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.89  E-value=2.8e-09  Score=79.80  Aligned_cols=81  Identities=26%  Similarity=0.326  Sum_probs=63.7

Q ss_pred             ccCCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCC----
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASH----  124 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~----  124 (156)
                      ...++|++.+.||+|+||.||+            |          ....+.+|+.+++.++||||+++++++.+..    
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence            3467899999999999999999            1          1124578999999999999999999887654    


Q ss_pred             ------eEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          125 ------YSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       125 ------~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                            .+++++||+++ +|..++... ...+++.
T Consensus        84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~  116 (302)
T cd07864          84 FKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSED  116 (302)
T ss_pred             ccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHH
Confidence                  79999999986 788877654 2345443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.89  E-value=7.1e-09  Score=77.77  Aligned_cols=79  Identities=22%  Similarity=0.406  Sum_probs=62.2

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCC------
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASH------  124 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~------  124 (156)
                      .++|++.+.||+|+||.||+            +          ....+.+|+.+++.++||||+++++++.+..      
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   90 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY   90 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence            56799999999999999998            1          1123567999999999999999999887654      


Q ss_pred             --eEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          125 --YSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       125 --~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                        ..+++|||+. ++|.+++... ...+++.
T Consensus        91 ~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~  119 (310)
T cd07865          91 KGSFYLVFEFCE-HDLAGLLSNK-NVKFTLS  119 (310)
T ss_pred             CceEEEEEcCCC-cCHHHHHHhc-ccCCCHH
Confidence              4599999997 5888888764 2345543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.89  E-value=2.7e-09  Score=78.01  Aligned_cols=70  Identities=26%  Similarity=0.514  Sum_probs=59.1

Q ss_pred             eccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCH
Q 043174           82 LGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDL  138 (156)
Q Consensus        82 lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L  138 (156)
                      ||.|+||.||+                       ...+.+.+|+.++..++||||+++++.+.....+|+++||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            58888888888                       1234678899999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCCC
Q 043174          139 LTVSQRQRRLRFSIP  153 (156)
Q Consensus       139 ~~~l~~~~~~~~~e~  153 (156)
                      .+++.+.  +.+++.
T Consensus        81 ~~~l~~~--~~~~~~   93 (265)
T cd05579          81 ASLLENV--GSLDED   93 (265)
T ss_pred             HHHHHHc--CCCCHH
Confidence            9999875  455543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=98.88  E-value=1e-08  Score=79.13  Aligned_cols=70  Identities=29%  Similarity=0.375  Sum_probs=57.9

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCC------
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASH------  124 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~------  124 (156)
                      .++|.+.+.||+|+||.||+            |          ....+.+|+.++..++||||+++++++....      
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   99 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ   99 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence            57899999999999999999            1          1235678999999999999999999886543      


Q ss_pred             eEEEEEeccCCCCHHHHHH
Q 043174          125 YSRLVIEYCPGGDLLTVSQ  143 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~  143 (156)
                      .+|++|||+++ +|.+.+.
T Consensus       100 ~~~lv~e~~~~-~l~~~~~  117 (359)
T cd07876         100 DVYLVMELMDA-NLCQVIH  117 (359)
T ss_pred             eeEEEEeCCCc-CHHHHHh
Confidence            57999999975 6766664

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=98.88  E-value=3.6e-09  Score=87.22  Aligned_cols=78  Identities=23%  Similarity=0.387  Sum_probs=68.9

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe----------------------------chhhhHHHHHHHHHhC-CCCCCCceeE
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI----------------------------KKRNRVHIEKEILKML-DHPFLPSLFA  118 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~----------------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~  118 (156)
                      .+.+..+++.+.+.||+|.||.|++                            +..+.+..|+.+|+.+ .|+||+.+.|
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG  369 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG  369 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence            4556667777778999999999998                            2346789999999998 6999999999


Q ss_pred             EEEeCCeEEEEEeccCCCCHHHHHHhc
Q 043174          119 EFEASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       119 ~~~~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ++...+.+++++||+..|+|..+++..
T Consensus       370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~  396 (609)
T KOG0200|consen  370 ACTQDGPLYVIVEYAEHGDLLEFLRKK  396 (609)
T ss_pred             eeccCCceEEEEEeccCCcHHHHHHhc
Confidence            999999999999999999999999986

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=98.88  E-value=5.5e-09  Score=77.05  Aligned_cols=68  Identities=22%  Similarity=0.236  Sum_probs=55.5

Q ss_pred             EEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe------CCeE
Q 043174           77 QLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA------SHYS  126 (156)
Q Consensus        77 ~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~------~~~~  126 (156)
                      .+.+.||+|+||.||+                        ...+.+.+|+.++..++|+||+++++.+..      ....
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            4568899999999997                        123457889999999999999999987643      2357


Q ss_pred             EEEEeccCCCCHHHHHHh
Q 043174          127 RLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~  144 (156)
                      +++|||+++|+|.+++..
T Consensus        82 ~~v~e~~~~~~l~~~~~~   99 (272)
T cd05075          82 VVILPFMKHGDLHSFLLY   99 (272)
T ss_pred             EEEEEeCCCCcHHHHHHH
Confidence            899999999999998853

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.87  E-value=1.3e-10  Score=93.87  Aligned_cols=81  Identities=25%  Similarity=0.422  Sum_probs=68.4

Q ss_pred             ccCCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      -..++|.++..+|.|+||.||+                    .....++.|+-+++.++|||||.+++.+...+.+++.|
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM   91 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM   91 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence            3457899999999999999999                    23445788999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |||.||+|.+.-.-.  +.++|.
T Consensus        92 EycgggslQdiy~~T--gplsel  112 (829)
T KOG0576|consen   92 EYCGGGSLQDIYHVT--GPLSEL  112 (829)
T ss_pred             EecCCCcccceeeec--ccchhH
Confidence            999999998876543  555543

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.87  E-value=7.8e-09  Score=78.91  Aligned_cols=72  Identities=25%  Similarity=0.220  Sum_probs=61.0

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEe-CCeEEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEA-SHYSRL  128 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~-~~~~~l  128 (156)
                      ..++|.+.+.||+|+||.||+            |          ..+.+..|+.++..++||||+++++++.. ...+++
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l   87 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF   87 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence            357799999999999999998            1          12457789999999999999999998876 567999


Q ss_pred             EEeccCCCCHHHHHHh
Q 043174          129 VIEYCPGGDLLTVSQR  144 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~  144 (156)
                      ++||+ +++|..+++.
T Consensus        88 v~e~~-~~~L~~~~~~  102 (328)
T cd07856          88 VTELL-GTDLHRLLTS  102 (328)
T ss_pred             Eeehh-ccCHHHHHhc
Confidence            99998 5689888875

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.87  E-value=1.1e-08  Score=75.85  Aligned_cols=70  Identities=17%  Similarity=0.349  Sum_probs=56.9

Q ss_pred             CCeEEEEEeccCCceEEEe------------c---------hhhhHHHHHHH-HHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K---------KRNRVHIEKEI-LKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~---------~~~~~~~E~~~-l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      ++|.+.+.||+|+||.||+            |         ....+..|+.+ ++.++||||+++++.+..++.+|++||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            4789999999999999999            1         11234456654 556789999999999999999999999


Q ss_pred             ccCCCCHHHHHHh
Q 043174          132 YCPGGDLLTVSQR  144 (156)
Q Consensus       132 ~~~~g~L~~~l~~  144 (156)
                      |++ |+|.+++..
T Consensus        81 ~~~-~~l~~~l~~   92 (283)
T cd06617          81 VMD-TSLDKFYKK   92 (283)
T ss_pred             hhc-ccHHHHHHH
Confidence            997 688888865

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=98.87  E-value=2.1e-09  Score=81.39  Aligned_cols=79  Identities=24%  Similarity=0.279  Sum_probs=64.5

Q ss_pred             CCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEe-----CCeE
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEA-----SHYS  126 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~-----~~~~  126 (156)
                      ..|..++.||+|+||.|+.            |          ..+...+|+++|+.++|+||+.+.+++..     -..+
T Consensus        22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv  101 (359)
T KOG0660|consen   22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV  101 (359)
T ss_pred             ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence            4455578999999999999            1          12456889999999999999999998876     3469


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |+|+|+++ -||.+.|+.+  ..++++++
T Consensus       102 YiV~elMe-tDL~~iik~~--~~L~d~H~  127 (359)
T KOG0660|consen  102 YLVFELME-TDLHQIIKSQ--QDLTDDHA  127 (359)
T ss_pred             EEehhHHh-hHHHHHHHcC--ccccHHHH
Confidence            99999995 5999999985  55777665

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.87  E-value=6.9e-09  Score=77.21  Aligned_cols=79  Identities=25%  Similarity=0.291  Sum_probs=60.0

Q ss_pred             CeEEEEEeccCCceEEEe------------ch----------hhhHHHHHHHHHhC---CCCCCCceeEEEEe-----CC
Q 043174           75 QFQLFRRLGSGIIRSVYI------------KK----------RNRVHIEKEILKML---DHPFLPSLFAEFEA-----SH  124 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~------------~~----------~~~~~~E~~~l~~~---~h~~iv~l~~~~~~-----~~  124 (156)
                      .|.+.+.||+|+||.||+            |.          .....+|+.++..+   +||||+++++++.+     ..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            478899999999999999            11          12356788877765   69999999998764     34


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      .++++|||++ ++|.+++.......++++.
T Consensus        81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~  109 (288)
T cd07863          81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAET  109 (288)
T ss_pred             eEEEEEcccc-cCHHHHHHhcCCCCCCHHH
Confidence            5899999998 5999998875334466543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.87  E-value=5.3e-09  Score=77.63  Aligned_cols=76  Identities=24%  Similarity=0.290  Sum_probs=62.9

Q ss_pred             eEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           76 FQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      |++.+.||.|++|.||+            +          ....+.+|+.+++.++||||+++++.+.+.+..|++|||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            56778999999999998            1          1235778999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCCC
Q 043174          134 PGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~~e  152 (156)
                      + ++|.+++...+...+++
T Consensus        81 ~-~~l~~~~~~~~~~~~~~   98 (283)
T cd07835          81 D-LDLKKYMDSSPLTGLDP   98 (283)
T ss_pred             C-cCHHHHHhhCCCCCCCH
Confidence            5 69999998753224544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=98.87  E-value=7.2e-09  Score=76.02  Aligned_cols=65  Identities=25%  Similarity=0.335  Sum_probs=54.5

Q ss_pred             EeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEE-eCCeEEEEEeccCC
Q 043174           81 RLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFE-ASHYSRLVIEYCPG  135 (156)
Q Consensus        81 ~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~-~~~~~~lv~E~~~~  135 (156)
                      .||+|+||.||+                        +..+.+.+|+.+++.++||||+++++.+. .++..+++|||+++
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~   81 (262)
T cd05058           2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH   81 (262)
T ss_pred             cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence            589999999985                        12346778999999999999999999765 45568999999999


Q ss_pred             CCHHHHHHhc
Q 043174          136 GDLLTVSQRQ  145 (156)
Q Consensus       136 g~L~~~l~~~  145 (156)
                      |+|.+++.+.
T Consensus        82 ~~L~~~~~~~   91 (262)
T cd05058          82 GDLRNFIRSE   91 (262)
T ss_pred             CCHHHHHHhc
Confidence            9999999764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=98.87  E-value=5.6e-09  Score=79.18  Aligned_cols=77  Identities=23%  Similarity=0.388  Sum_probs=62.5

Q ss_pred             CCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ..|...+.||+|+||.||+                       +....+..|+.+++.++|+|++++++++.++...+++|
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  104 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM  104 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence            3377888999999999998                       11235778999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      ||++ |+|.+++... ...+++
T Consensus       105 e~~~-g~l~~~~~~~-~~~l~~  124 (317)
T cd06635         105 EYCL-GSASDLLEVH-KKPLQE  124 (317)
T ss_pred             eCCC-CCHHHHHHHh-cCCCCH
Confidence            9997 5888887653 234443

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=98.86  E-value=3.7e-09  Score=78.87  Aligned_cols=84  Identities=24%  Similarity=0.343  Sum_probs=68.8

Q ss_pred             cCCCeEEE-EEeccCCceEEEe---------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEe----CCeEEEEE
Q 043174           72 GLDQFQLF-RRLGSGIIRSVYI---------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEA----SHYSRLVI  130 (156)
Q Consensus        72 ~~~~~~~~-~~lG~G~~g~V~~---------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~----~~~~~lv~  130 (156)
                      .+++|.+. .+||-|--|+|..               ...+..++|++..... .|||||.++++|+.    ...+.+||
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVm  138 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVM  138 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeee
Confidence            35777774 5899999999887               2235678999987766 69999999998764    45688999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |+++||+|+..|+.+....|+|.+|
T Consensus       139 E~meGGeLfsriq~~g~~afTErea  163 (400)
T KOG0604|consen  139 ECMEGGELFSRIQDRGDQAFTEREA  163 (400)
T ss_pred             ecccchHHHHHHHHcccccchHHHH
Confidence            9999999999999987777999875

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.86  E-value=1.1e-08  Score=75.81  Aligned_cols=76  Identities=18%  Similarity=0.263  Sum_probs=59.7

Q ss_pred             eEEEEEeccCCceEEEe------------c---------hhhhHHHHHHHHHhCC-CCCCCceeEEEEeC--CeEEEEEe
Q 043174           76 FQLFRRLGSGIIRSVYI------------K---------KRNRVHIEKEILKMLD-HPFLPSLFAEFEAS--HYSRLVIE  131 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~------------~---------~~~~~~~E~~~l~~~~-h~~iv~l~~~~~~~--~~~~lv~E  131 (156)
                      |++.+.||+|+||.||+            +         ......+|+.++..+. |+||+++++++.+.  +.++++||
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            57789999999999999            1         0112356888888885 99999999999987  89999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |++ |+|.+.+... .+.+++.
T Consensus        81 ~~~-~~l~~~l~~~-~~~~~~~  100 (282)
T cd07831          81 LMD-MNLYELIKGR-KRPLPEK  100 (282)
T ss_pred             cCC-ccHHHHHHhc-cCCCCHH
Confidence            997 5888888764 2345543

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=98.85  E-value=1.5e-08  Score=78.34  Aligned_cols=71  Identities=25%  Similarity=0.345  Sum_probs=58.2

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC------C
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS------H  124 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~------~  124 (156)
                      .++|.+.+.||+|+||.||+            |          ....+.+|+.+++.++||||+++++++...      .
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~  102 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  102 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence            57899999999999999998            1          123567899999999999999999987543      3


Q ss_pred             eEEEEEeccCCCCHHHHHHh
Q 043174          125 YSRLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~  144 (156)
                      .+|+||||+++ +|.+.+..
T Consensus       103 ~~~lv~e~~~~-~l~~~~~~  121 (364)
T cd07875         103 DVYIVMELMDA-NLCQVIQM  121 (364)
T ss_pred             eEEEEEeCCCC-CHHHHHHh
Confidence            58999999975 77777653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.85  E-value=3.9e-09  Score=76.78  Aligned_cols=70  Identities=34%  Similarity=0.615  Sum_probs=59.2

Q ss_pred             eccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCH
Q 043174           82 LGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDL  138 (156)
Q Consensus        82 lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L  138 (156)
                      ||+|+||.||.                       .....+..|+.+++.++|+||+++++.+.++..++++|||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            68888888887                       1233678899999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCCC
Q 043174          139 LTVSQRQRRLRFSIP  153 (156)
Q Consensus       139 ~~~l~~~~~~~~~e~  153 (156)
                      .+++...  +.+++.
T Consensus        81 ~~~l~~~--~~l~~~   93 (250)
T cd05123          81 FSHLSKE--GRFSEE   93 (250)
T ss_pred             HHHHHhc--CCCCHH
Confidence            9999875  445543

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=98.85  E-value=1.1e-08  Score=78.70  Aligned_cols=72  Identities=28%  Similarity=0.339  Sum_probs=58.6

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC------
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS------  123 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~------  123 (156)
                      ..++|.+.+.||+|+||.||+            |          ....+.+|+.+++.++||||+++++++...      
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            357899999999999999998            1          124567899999999999999999988653      


Q ss_pred             CeEEEEEeccCCCCHHHHHHh
Q 043174          124 HYSRLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~  144 (156)
                      ..+|++|||+++ +|.+.+..
T Consensus        95 ~~~~lv~e~~~~-~l~~~~~~  114 (355)
T cd07874          95 QDVYLVMELMDA-NLCQVIQM  114 (355)
T ss_pred             ceeEEEhhhhcc-cHHHHHhh
Confidence            357999999975 67776653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.85  E-value=9.9e-09  Score=75.29  Aligned_cols=73  Identities=26%  Similarity=0.463  Sum_probs=55.9

Q ss_pred             EEeccCCceEEEe------------ch-----------hhhHHHHHHHHH-hCCCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           80 RRLGSGIIRSVYI------------KK-----------RNRVHIEKEILK-MLDHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        80 ~~lG~G~~g~V~~------------~~-----------~~~~~~E~~~l~-~~~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      +.||+|+||.||+            |.           ...+..|..++. ..+|+||+++++.+...+.+|+++||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            5689999999998            11           112334444443 45899999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCCCCCC
Q 043174          136 GDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       136 g~L~~~l~~~~~~~~~e~~  154 (156)
                      |+|.++++..  +.+++..
T Consensus        82 ~~L~~~l~~~--~~~~~~~   98 (260)
T cd05611          82 GDCASLIKTL--GGLPEDW   98 (260)
T ss_pred             CCHHHHHHHc--CCCCHHH
Confidence            9999999875  5566543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.85  E-value=3.5e-09  Score=80.86  Aligned_cols=77  Identities=16%  Similarity=0.213  Sum_probs=62.6

Q ss_pred             CCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe----CCeEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA----SHYSR  127 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~----~~~~~  127 (156)
                      ++|.+.+.||+|+||.||+                      .....+.+|+.++..++||||+++++++..    ...++
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   84 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY   84 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence            6799999999999999997                      122356789999999999999999988763    35789


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++|||+. |+|.+++...  +.+++.
T Consensus        85 lv~e~~~-~~l~~~~~~~--~~~~~~  107 (334)
T cd07855          85 VVMDLME-SDLHHIIHSD--QPLTEE  107 (334)
T ss_pred             EEEehhh-hhHHHHhccC--CCCCHH
Confidence            9999996 6899998764  446554

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.84  E-value=1.7e-08  Score=76.48  Aligned_cols=75  Identities=24%  Similarity=0.389  Sum_probs=61.5

Q ss_pred             eEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           76 FQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      |...+.||+|+||.||+                       ...+.+.+|+.+++.++|||++++++++.+....|++|||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            66677899999999999                       1123577899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e  152 (156)
                      +. |+|.+++... ...+++
T Consensus       103 ~~-~~l~~~l~~~-~~~l~~  120 (313)
T cd06633         103 CL-GSASDLLEVH-KKPLQE  120 (313)
T ss_pred             CC-CCHHHHHHhc-CCCCCH
Confidence            96 5888888654 234444

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.84  E-value=8.1e-09  Score=76.94  Aligned_cols=72  Identities=24%  Similarity=0.299  Sum_probs=54.6

Q ss_pred             EeccCCceEEEe------------ch-----------hhhHHHHHHHHHh---CCCCCCCceeEEEEeCCeEEEEEeccC
Q 043174           81 RLGSGIIRSVYI------------KK-----------RNRVHIEKEILKM---LDHPFLPSLFAEFEASHYSRLVIEYCP  134 (156)
Q Consensus        81 ~lG~G~~g~V~~------------~~-----------~~~~~~E~~~l~~---~~h~~iv~l~~~~~~~~~~~lv~E~~~  134 (156)
                      .||+|+||.||+            +.           .....+|..++..   .+||||+.+++.+...+..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            489999999997            10           1123344443333   479999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCCCCCC
Q 043174          135 GGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       135 ~g~L~~~l~~~~~~~~~e~~  154 (156)
                      +|+|.+++..+  +.+++..
T Consensus        81 ~~~L~~~i~~~--~~l~~~~   98 (279)
T cd05633          81 GGDLHYHLSQH--GVFSEKE   98 (279)
T ss_pred             CCCHHHHHHhc--CCCCHHH
Confidence            99999999875  5666543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.84  E-value=1.1e-08  Score=75.74  Aligned_cols=76  Identities=22%  Similarity=0.315  Sum_probs=62.3

Q ss_pred             eEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC--CeEEEEEe
Q 043174           76 FQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS--HYSRLVIE  131 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~--~~~~lv~E  131 (156)
                      |++.+.||+|+||.||+            |          ..+.+.+|+.+++.++|+|++++++++.+.  +.+++++|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            57889999999999999            0          123477899999999999999999999988  89999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |+++ +|.+++... ...+++.
T Consensus        81 ~~~~-~l~~~~~~~-~~~~~~~  100 (287)
T cd07840          81 YMDH-DLTGLLDSP-EVKFTES  100 (287)
T ss_pred             cccc-cHHHHHhcc-CCCCCHH
Confidence            9974 899988764 2345543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=98.84  E-value=5.6e-10  Score=92.35  Aligned_cols=70  Identities=31%  Similarity=0.347  Sum_probs=61.4

Q ss_pred             eEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           76 FQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      .+..++||.|+||.||+                         +....+..|+-+|.+++|||+++|++++.... +.||+
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt  776 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT  776 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence            34467899999999999                         34567899999999999999999999987655 89999


Q ss_pred             eccCCCCHHHHHHhcC
Q 043174          131 EYCPGGDLLTVSQRQR  146 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~  146 (156)
                      +|+++|.|.+|++.++
T Consensus       777 q~mP~G~LlDyvr~hr  792 (1177)
T KOG1025|consen  777 QLMPLGCLLDYVREHR  792 (1177)
T ss_pred             HhcccchHHHHHHHhh
Confidence            9999999999999873

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.84  E-value=6.1e-09  Score=81.00  Aligned_cols=72  Identities=24%  Similarity=0.297  Sum_probs=60.7

Q ss_pred             CCeEEEEEeccCCceEEEe---------------chhhhHHHHHHHHHh--CCCCCCCceeEEEEeCC----eEEEEEec
Q 043174           74 DQFQLFRRLGSGIIRSVYI---------------KKRNRVHIEKEILKM--LDHPFLPSLFAEFEASH----YSRLVIEY  132 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~---------------~~~~~~~~E~~~l~~--~~h~~iv~l~~~~~~~~----~~~lv~E~  132 (156)
                      .+..+++.||+|-||.||+               ...+.+.+|.+|-..  ++|.||+.+++.-..+.    .++||.+|
T Consensus       211 rqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdY  290 (513)
T KOG2052|consen  211 RQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDY  290 (513)
T ss_pred             heeEEEEEecCccccceeeccccCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeec
Confidence            5678999999999999999               345678888888875  59999999998654433    59999999


Q ss_pred             cCCCCHHHHHHhc
Q 043174          133 CPGGDLLTVSQRQ  145 (156)
Q Consensus       133 ~~~g~L~~~l~~~  145 (156)
                      -+.|+|++||.++
T Consensus       291 He~GSL~DyL~r~  303 (513)
T KOG2052|consen  291 HEHGSLYDYLNRN  303 (513)
T ss_pred             ccCCcHHHHHhhc
Confidence            9999999999874

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.84  E-value=6.9e-09  Score=79.35  Aligned_cols=78  Identities=19%  Similarity=0.226  Sum_probs=62.9

Q ss_pred             CCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC-----CeE
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS-----HYS  126 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~-----~~~  126 (156)
                      ..|.+.+.||+|+||.||+            |          ....+.+|+.++..++|+||+++++++...     ..+
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~   84 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV   84 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence            5689999999999999998            1          123467799999999999999999977654     358


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      |+++||+. ++|.+++...  +.++++.
T Consensus        85 ~lv~e~~~-~~L~~~~~~~--~~l~~~~  109 (337)
T cd07858          85 YIVYELMD-TDLHQIIRSS--QTLSDDH  109 (337)
T ss_pred             EEEEeCCC-CCHHHHHhcC--CCCCHHH
Confidence            99999996 6899998765  5566543

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=98.84  E-value=2.6e-09  Score=81.76  Aligned_cols=78  Identities=26%  Similarity=0.323  Sum_probs=61.8

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC------C
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS------H  124 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~------~  124 (156)
                      .+.|.+.+.||+|+||.||+            |          ..+.+.+|+.+++.++||||+++++++...      .
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07878          14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN   93 (343)
T ss_pred             hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence            46799999999999999998            1          123466899999999999999999887543      4


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      .+|+++|++ +++|..+++.   +.++++.
T Consensus        94 ~~~~~~~~~-~~~l~~~~~~---~~l~~~~  119 (343)
T cd07878          94 EVYLVTNLM-GADLNNIVKC---QKLSDEH  119 (343)
T ss_pred             cEEEEeecC-CCCHHHHHhc---CCCCHHH
Confidence            579999987 7899888865   4566543

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=98.83  E-value=2.1e-09  Score=80.60  Aligned_cols=72  Identities=26%  Similarity=0.383  Sum_probs=62.6

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------ch----------hhhHHHHHHHHHhCCCCCCCceeEEEEe-CCe
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------KK----------RNRVHIEKEILKMLDHPFLPSLFAEFEA-SHY  125 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------~~----------~~~~~~E~~~l~~~~h~~iv~l~~~~~~-~~~  125 (156)
                      +..|+.++.||+|.||.||+                |.          -....+|+..++.++|+|++.|..+|.. +..
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~  102 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK  102 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence            45689999999999999999                11          1246889999999999999999998887 889


Q ss_pred             EEEEEeccCCCCHHHHHHhc
Q 043174          126 SRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +++++||++. ||+++|+-+
T Consensus       103 v~l~fdYAEh-DL~~II~fH  121 (438)
T KOG0666|consen  103 VWLLFDYAEH-DLWHIIKFH  121 (438)
T ss_pred             EEEEehhhhh-hHHHHHHHh
Confidence            9999999996 999999876

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.83  E-value=8.8e-09  Score=78.56  Aligned_cols=74  Identities=24%  Similarity=0.301  Sum_probs=61.0

Q ss_pred             EEEEEeccCCceEEEe------------ch-----h-----------------hhHHHHHHHHHhCCCCCCCceeEEEEe
Q 043174           77 QLFRRLGSGIIRSVYI------------KK-----R-----------------NRVHIEKEILKMLDHPFLPSLFAEFEA  122 (156)
Q Consensus        77 ~~~~~lG~G~~g~V~~------------~~-----~-----------------~~~~~E~~~l~~~~h~~iv~l~~~~~~  122 (156)
                      .+.+.||.|+||.||+            +.     .                 ..+.+|+.++..++|+||+++++++..
T Consensus        12 ~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   91 (335)
T PTZ00024         12 QKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVE   91 (335)
T ss_pred             hhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEec
Confidence            3457899999999999            10     0                 136789999999999999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          123 SHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       123 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      .+.++++|||+. |+|.+++...  ..++++
T Consensus        92 ~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~  119 (335)
T PTZ00024         92 GDFINLVMDIMA-SDLKKVVDRK--IRLTES  119 (335)
T ss_pred             CCcEEEEEeccc-cCHHHHHHhc--CCCCHH
Confidence            999999999997 6999999764  455554

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.82  E-value=7.6e-09  Score=79.33  Aligned_cols=78  Identities=23%  Similarity=0.281  Sum_probs=62.8

Q ss_pred             CCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC---------
Q 043174           73 LDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS---------  123 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~---------  123 (156)
                      ..+|.+.+.||.|+||.||+                    +..+.+.+|+.+++.++||||+++++++...         
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG   83 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence            36799999999999999998                    1234678899999999999999999776553         


Q ss_pred             -----CeEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          124 -----HYSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       124 -----~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                           ..+|++|||++ ++|.+++..   +.+++..
T Consensus        84 ~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~  115 (342)
T cd07854          84 SLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEH  115 (342)
T ss_pred             cccccceEEEEeeccc-ccHHHHHHc---CCCCHHH
Confidence                 35899999997 599888865   3465543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.82  E-value=4.8e-09  Score=77.82  Aligned_cols=76  Identities=29%  Similarity=0.467  Sum_probs=61.3

Q ss_pred             eEEEEEeccCCceEEEe------------ch---------hhhHHHHHHHHHhCC-CCCCCceeEEEEeCCeEEEEEecc
Q 043174           76 FQLFRRLGSGIIRSVYI------------KK---------RNRVHIEKEILKMLD-HPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~------------~~---------~~~~~~E~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      |++.+.||+|+||.||+            |.         .....+|+..+..+. |+||+++++.+.+++..+++|||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            57788999999999998            11         113456888999998 999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCCC
Q 043174          134 PGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~~e  152 (156)
                       +|+|.+++.......+++
T Consensus        81 -~~~l~~~~~~~~~~~~~~   98 (283)
T cd07830          81 -EGNLYQLMKDRKGKPFSE   98 (283)
T ss_pred             -CCCHHHHHHhcccccCCH
Confidence             789999998752224443

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=98.81  E-value=4.3e-10  Score=83.00  Aligned_cols=76  Identities=18%  Similarity=0.303  Sum_probs=60.9

Q ss_pred             EEEeccCCceEEEechhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEEeccCCCCHHHHHHhcCCCCCCCCCcC
Q 043174           79 FRRLGSGIIRSVYIKKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus        79 ~~~lG~G~~g~V~~~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      +...+.+.+|.--...++....|+.||+++ .||+|+.+.++|+.+..+++|+|.|+.|+|+++|...  -.++|+++|
T Consensus        50 i~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~--VtlSEK~tR  126 (411)
T KOG0599|consen   50 IDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSK--VTLSEKETR  126 (411)
T ss_pred             EEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhh--eeecHHHHH
Confidence            334444444433115567788999999998 7999999999999999999999999999999999875  678877654

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.80  E-value=4e-08  Score=73.94  Aligned_cols=70  Identities=21%  Similarity=0.319  Sum_probs=58.9

Q ss_pred             CeEEEEEeccCCceEEEe----c---------------------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC--CeEE
Q 043174           75 QFQLFRRLGSGIIRSVYI----K---------------------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS--HYSR  127 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~----~---------------------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~--~~~~  127 (156)
                      .|.+.+.||+|+||.||+    .                     ..+.+.+|+.++..++||||+++++.+.+.  ..++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            378899999999999998    0                     013567799999999999999999999988  8899


Q ss_pred             EEEeccCCCCHHHHHHhc
Q 043174          128 LVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~  145 (156)
                      +||||+++ +|.+++...
T Consensus        81 lv~e~~~~-~l~~~~~~~   97 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFH   97 (316)
T ss_pred             EEEeCCCc-CHHHHHHhh
Confidence            99999974 788877643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.79  E-value=2e-08  Score=77.88  Aligned_cols=66  Identities=17%  Similarity=0.074  Sum_probs=53.4

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-------------ch-------------hhhHHHHHHHHHhCCCCCCCceeEEEEeCC
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-------------KK-------------RNRVHIEKEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-------------~~-------------~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      ...++|.+.+.||+|+||.||+             |.             .+.+.+|+++|..+.|+||+..+..   .+
T Consensus        15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~   91 (365)
T PRK09188         15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TG   91 (365)
T ss_pred             cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cC
Confidence            3467899999999999999998             11             2247899999999999999853322   25


Q ss_pred             eEEEEEeccCCCCHH
Q 043174          125 YSRLVIEYCPGGDLL  139 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~  139 (156)
                      ..|+||||++|++|.
T Consensus        92 ~~~LVmE~~~G~~L~  106 (365)
T PRK09188         92 KDGLVRGWTEGVPLH  106 (365)
T ss_pred             CcEEEEEccCCCCHH
Confidence            689999999999996

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.79  E-value=1.4e-08  Score=77.64  Aligned_cols=77  Identities=19%  Similarity=0.198  Sum_probs=61.8

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c---------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC-----CeE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K---------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS-----HYS  126 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~---------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~-----~~~  126 (156)
                      .++|.+.+.||+|+||.||+            |         ....+..|+.++..++|+||+++++++...     ..+
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            46799999999999999998            1         123467799999999999999999876653     358


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |+++||+. ++|..+++.   +.+++.
T Consensus        84 ~lv~e~~~-~~l~~~~~~---~~l~~~  106 (336)
T cd07849          84 YIVQELME-TDLYKLIKT---QHLSND  106 (336)
T ss_pred             EEEehhcc-cCHHHHHhc---CCCCHH
Confidence            99999997 589888865   356554

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.78  E-value=1.1e-09  Score=94.02  Aligned_cols=69  Identities=26%  Similarity=0.426  Sum_probs=61.8

Q ss_pred             eEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           76 FQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      +.....||.|.||.||.                      +....+.+|..++..++|||+|+++|+-...+.++|.||||
T Consensus      1237 Wqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC 1316 (1509)
T KOG4645|consen 1237 WQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYC 1316 (1509)
T ss_pred             eccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHh
Confidence            44556899999999999                      34556899999999999999999999888888999999999


Q ss_pred             CCCCHHHHHHh
Q 043174          134 PGGDLLTVSQR  144 (156)
Q Consensus       134 ~~g~L~~~l~~  144 (156)
                      ++|+|.++++.
T Consensus      1317 ~~GsLa~ll~~ 1327 (1509)
T KOG4645|consen 1317 EGGSLASLLEH 1327 (1509)
T ss_pred             ccCcHHHHHHh
Confidence            99999999987

>PTZ00284 protein kinase; Provisional

Probab=98.78  E-value=3.2e-08  Score=79.12  Aligned_cols=80  Identities=20%  Similarity=0.231  Sum_probs=60.6

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------ch-------hhhHHHHHHHHHhCCCC------CCCceeEEEEeC-Ce
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------KK-------RNRVHIEKEILKMLDHP------FLPSLFAEFEAS-HY  125 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------~~-------~~~~~~E~~~l~~~~h~------~iv~l~~~~~~~-~~  125 (156)
                      ..++|++.+.||+|+||.||+            |.       ......|+.++..++|.      +++.+++++... ..
T Consensus       127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~  206 (467)
T PTZ00284        127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGH  206 (467)
T ss_pred             CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCce
Confidence            357899999999999999999            21       12356688888776544      588888888764 57


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      +|+|||++ |++|.+++.++  +.+++..
T Consensus       207 ~~iv~~~~-g~~l~~~l~~~--~~l~~~~  232 (467)
T PTZ00284        207 MCIVMPKY-GPCLLDWIMKH--GPFSHRH  232 (467)
T ss_pred             EEEEEecc-CCCHHHHHHHc--CCCCHHH
Confidence            99999988 67999999875  5666543

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.78  E-value=1.7e-08  Score=75.16  Aligned_cols=72  Identities=22%  Similarity=0.271  Sum_probs=54.2

Q ss_pred             EeccCCceEEEe------------ch-----h------hhHHHHHHH---HHhCCCCCCCceeEEEEeCCeEEEEEeccC
Q 043174           81 RLGSGIIRSVYI------------KK-----R------NRVHIEKEI---LKMLDHPFLPSLFAEFEASHYSRLVIEYCP  134 (156)
Q Consensus        81 ~lG~G~~g~V~~------------~~-----~------~~~~~E~~~---l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~  134 (156)
                      .||+|+||.||+            |.     .      .....|..+   +....||+|+.+++.+.+.+.+++||||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            379999999997            10     0      113334333   334579999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCCCCCC
Q 043174          135 GGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       135 ~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ||+|..++...  +.+++..
T Consensus        81 g~~L~~~l~~~--~~l~~~~   98 (278)
T cd05606          81 GGDLHYHLSQH--GVFSEAE   98 (278)
T ss_pred             CCcHHHHHHhc--CCCCHHH
Confidence            99999999764  5666554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=98.77  E-value=4.6e-09  Score=76.39  Aligned_cols=77  Identities=19%  Similarity=0.273  Sum_probs=65.6

Q ss_pred             CccCCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe-----CC
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA-----SH  124 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~-----~~  124 (156)
                      .+..+.|.+.+.||+|+|..||+                    +.++..++|++..++++|||++++++....     ..
T Consensus        17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~   96 (302)
T KOG2345|consen   17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH   96 (302)
T ss_pred             EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence            34567899999999999999999                    456778999999999999999999875433     34


Q ss_pred             eEEEEEeccCCCCHHHHHHhcC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQR  146 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~  146 (156)
                      ..|+++.|-..|+|.+.|++.+
T Consensus        97 ~~yll~Pyy~~Gsl~d~i~~~k  118 (302)
T KOG2345|consen   97 EAYLLLPYYKRGSLLDEIERLK  118 (302)
T ss_pred             eEEEEeehhccccHHHHHHHHh
Confidence            5999999999999999998754

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.76  E-value=2.9e-08  Score=75.02  Aligned_cols=65  Identities=26%  Similarity=0.314  Sum_probs=53.7

Q ss_pred             EEEeccCCceEEEe--------------c------hhhhHHHHHHHHHhCCCCCCCceeEEEEe--CCeEEEEEeccCCC
Q 043174           79 FRRLGSGIIRSVYI--------------K------KRNRVHIEKEILKMLDHPFLPSLFAEFEA--SHYSRLVIEYCPGG  136 (156)
Q Consensus        79 ~~~lG~G~~g~V~~--------------~------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~--~~~~~lv~E~~~~g  136 (156)
                      .++||+|+||.||+              +      ....+.+|+.++..++||||+++++++..  ...++++|||+. +
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~   84 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-H   84 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-C
Confidence            35799999999998              1      12357889999999999999999998854  567899999986 5


Q ss_pred             CHHHHHHh
Q 043174          137 DLLTVSQR  144 (156)
Q Consensus       137 ~L~~~l~~  144 (156)
                      +|.+++..
T Consensus        85 ~l~~~~~~   92 (317)
T cd07868          85 DLWHIIKF   92 (317)
T ss_pred             CHHHHHHh
Confidence            89888864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.75  E-value=3.2e-08  Score=76.00  Aligned_cols=77  Identities=25%  Similarity=0.328  Sum_probs=61.0

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC------C
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS------H  124 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~------~  124 (156)
                      .++|.+.+.||+|+||.||+            |          ..+.+.+|+.++..++|+||+++++++...      .
T Consensus        16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (345)
T cd07877          16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   95 (345)
T ss_pred             cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccc
Confidence            47899999999999999998            1          123467799999999999999999988653      3


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      .+|++++++ +++|.++++.   +.++++
T Consensus        96 ~~~lv~~~~-~~~L~~~~~~---~~l~~~  120 (345)
T cd07877          96 DVYLVTHLM-GADLNNIVKC---QKLTDD  120 (345)
T ss_pred             cEEEEehhc-ccCHHHHHhc---CCCCHH
Confidence            478888876 7899888765   345543

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.74  E-value=3.2e-09  Score=85.45  Aligned_cols=76  Identities=25%  Similarity=0.402  Sum_probs=62.6

Q ss_pred             eEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           76 FQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      |.-++.||.|+||.||-                       ..-+.+..|+..|.++.|||+|.+.|+|..+...++||||
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY  107 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY  107 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence            44466799999999998                       2335689999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |- |+-.++|.-+ ++.+.|.
T Consensus       108 Cl-GSAsDlleVh-kKplqEv  126 (948)
T KOG0577|consen  108 CL-GSASDLLEVH-KKPLQEV  126 (948)
T ss_pred             Hh-ccHHHHHHHH-hccchHH
Confidence            97 5777777655 3556553

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.74  E-value=4.5e-08  Score=73.88  Aligned_cols=65  Identities=25%  Similarity=0.309  Sum_probs=53.6

Q ss_pred             EEEeccCCceEEEe--------------c------hhhhHHHHHHHHHhCCCCCCCceeEEEEe--CCeEEEEEeccCCC
Q 043174           79 FRRLGSGIIRSVYI--------------K------KRNRVHIEKEILKMLDHPFLPSLFAEFEA--SHYSRLVIEYCPGG  136 (156)
Q Consensus        79 ~~~lG~G~~g~V~~--------------~------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~--~~~~~lv~E~~~~g  136 (156)
                      ...||+|+||.||+              +      ....+.+|+.++..++||||+++++++..  +..++++|||++ +
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~   84 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE-H   84 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-C
Confidence            35799999999998              1      12357889999999999999999998854  567999999987 5


Q ss_pred             CHHHHHHh
Q 043174          137 DLLTVSQR  144 (156)
Q Consensus       137 ~L~~~l~~  144 (156)
                      +|.+++..
T Consensus        85 ~l~~~~~~   92 (317)
T cd07867          85 DLWHIIKF   92 (317)
T ss_pred             cHHHHHHh
Confidence            88888864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=98.74  E-value=1.4e-08  Score=81.83  Aligned_cols=75  Identities=19%  Similarity=0.269  Sum_probs=62.7

Q ss_pred             eEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhCC------CCCCCceeEEEEeCCeEEEEE
Q 043174           76 FQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKMLD------HPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~~------h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      |.+++.||+|+||.|.+                   ...+....|+.+|..++      .-|+|+++++|.-.+++|||+
T Consensus       188 Y~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVf  267 (586)
T KOG0667|consen  188 YEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVF  267 (586)
T ss_pred             EEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeee
Confidence            67899999999999998                   22456788999999886      349999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFS  151 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~  151 (156)
                      |.+. -+|+++|+.+.-..|+
T Consensus       268 ELL~-~NLYellK~n~f~Gls  287 (586)
T KOG0667|consen  268 ELLS-TNLYELLKNNKFRGLS  287 (586)
T ss_pred             hhhh-hhHHHHHHhcCCCCCC
Confidence            9986 5999999987544444

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.74  E-value=1.1e-08  Score=77.23  Aligned_cols=59  Identities=12%  Similarity=0.022  Sum_probs=50.6

Q ss_pred             hhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174           95 RNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus        95 ~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ...+..|+.+++.++|+||+++++++.+.+..+++|||+++|+|.+++.+.....+++.
T Consensus        43 ~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~  101 (314)
T cd08216          43 LKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPEL  101 (314)
T ss_pred             HHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHH
Confidence            34688999999999999999999999999999999999999999999987533345543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.73  E-value=1.3e-08  Score=77.33  Aligned_cols=76  Identities=22%  Similarity=0.308  Sum_probs=63.6

Q ss_pred             CeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCC-----eEE
Q 043174           75 QFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASH-----YSR  127 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~-----~~~  127 (156)
                      +|.+.+.||.|+||.||+            +          ..+.+.+|+.+++.++|+||+++++++.+..     .+|
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            478899999999999998            1          2346788999999999999999999988775     799


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++|||++ ++|.+++.+.  +.+++.
T Consensus        81 lv~e~~~-~~l~~~l~~~--~~l~~~  103 (330)
T cd07834          81 IVTELME-TDLHKVIKSP--QPLTDD  103 (330)
T ss_pred             EEecchh-hhHHHHHhCC--CCCCHH
Confidence            9999998 5899998764  456554

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.73  E-value=7.5e-08  Score=74.08  Aligned_cols=71  Identities=27%  Similarity=0.368  Sum_probs=58.6

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC------C
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS------H  124 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~------~  124 (156)
                      .+.|++.+.||+|+||.||+            |          ....+.+|+.++..++|+||+++++++...      .
T Consensus        15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   94 (353)
T cd07850          15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ   94 (353)
T ss_pred             hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence            47799999999999999998            1          123466799999999999999999988654      3


Q ss_pred             eEEEEEeccCCCCHHHHHHh
Q 043174          125 YSRLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~  144 (156)
                      .+|+||||+. ++|.+.+..
T Consensus        95 ~~~lv~e~~~-~~l~~~~~~  113 (353)
T cd07850          95 DVYLVMELMD-ANLCQVIQM  113 (353)
T ss_pred             cEEEEEeccC-CCHHHHHhh
Confidence            5799999996 588888764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.73  E-value=2.5e-08  Score=75.35  Aligned_cols=78  Identities=24%  Similarity=0.379  Sum_probs=62.3

Q ss_pred             CCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      ..|...+.||+|+||.||+                       ...+.+.+|+.+++.++|+|++++++++......++||
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   94 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence            3466778899999999997                       11234678999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||+. |+|.+++... ...+++.
T Consensus        95 e~~~-~~l~~~~~~~-~~~l~~~  115 (308)
T cd06634          95 EYCL-GSASDLLEVH-KKPLQEV  115 (308)
T ss_pred             EccC-CCHHHHHHHc-CCCCCHH
Confidence            9997 6888877653 2345543

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.71  E-value=1.9e-08  Score=77.18  Aligned_cols=77  Identities=27%  Similarity=0.342  Sum_probs=62.9

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe-----
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHY-----  125 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~-----  125 (156)
                      .++|.+.+.||+|+||.||+            +          ..+.+.+|+.+++.+.|+||+++++++.....     
T Consensus        14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07851          14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ   93 (343)
T ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence            56799999999999999998            1          12346679999999999999999988776554     


Q ss_pred             -EEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          126 -SRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       126 -~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                       +++++||+ +++|.+++..   ..+++.
T Consensus        94 ~~~lv~e~~-~~~L~~~~~~---~~l~~~  118 (343)
T cd07851          94 DVYLVTHLM-GADLNNIVKC---QKLSDD  118 (343)
T ss_pred             cEEEEEecC-CCCHHHHHhc---CCCCHH
Confidence             99999998 5799999876   356654

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.71  E-value=3.9e-08  Score=73.78  Aligned_cols=79  Identities=24%  Similarity=0.332  Sum_probs=61.8

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC-------
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS-------  123 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~-------  123 (156)
                      .++|.+.+.||+|+||.||+            +          ....+.+|+++++.++||||+++++.+.+.       
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            68999999999999999998            1          112467899999999999999999877543       


Q ss_pred             -CeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          124 -HYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       124 -~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                       ..++++|||+.+ +|...+... ...+++.
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~~-~~~~~~~  115 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLENP-SVKLTES  115 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhcc-ccCCCHH
Confidence             357999999974 787777653 2445554

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.70  E-value=1.6e-08  Score=77.24  Aligned_cols=71  Identities=31%  Similarity=0.470  Sum_probs=59.3

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhC-CCCCCCceeEEEEe--CCeEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKML-DHPFLPSLFAEFEA--SHYSR  127 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~--~~~~~  127 (156)
                      .++|.+.+.||+|+||.||+            +          ....+.+|+.++..+ +|+||+++++++..  ...+|
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   85 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY   85 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence            56788899999999999998            1          123466799999999 99999999998765  34689


Q ss_pred             EEEeccCCCCHHHHHHh
Q 043174          128 LVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~  144 (156)
                      +||||++ ++|..+++.
T Consensus        86 lv~e~~~-~~L~~~~~~  101 (337)
T cd07852          86 LVFEYME-TDLHAVIRA  101 (337)
T ss_pred             EEecccc-cCHHHHHhc
Confidence            9999997 599998876

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.69  E-value=2.5e-08  Score=73.84  Aligned_cols=76  Identities=25%  Similarity=0.363  Sum_probs=62.3

Q ss_pred             eEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           76 FQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      |.+.+.||+|++|.||+            +          ....+..|+.+++.++|+||+++++.+.+...+++++||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            45678899999999999            1          1235778999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCCCC
Q 043174          134 PGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++ +|.+++... .+.+++.
T Consensus        81 ~~-~l~~~l~~~-~~~~~~~   98 (283)
T cd05118          81 DT-DLYKLIKDR-QRGLPES   98 (283)
T ss_pred             CC-CHHHHHHhh-cccCCHH
Confidence            75 999988774 2445543

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=98.69  E-value=4.4e-08  Score=72.24  Aligned_cols=69  Identities=28%  Similarity=0.294  Sum_probs=55.6

Q ss_pred             eEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC------
Q 043174           76 FQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH------  124 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~------  124 (156)
                      |.+.+.||+|+||.||+                         ...+.+.+|+.+++.++||||+++++.+....      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            46678899999999986                         11234778999999999999999999875432      


Q ss_pred             eEEEEEeccCCCCHHHHHHh
Q 043174          125 YSRLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~  144 (156)
                      ..++++||+++|+|..++..
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~  100 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLM  100 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHH
Confidence            35789999999999988754

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.69  E-value=8e-08  Score=71.23  Aligned_cols=77  Identities=25%  Similarity=0.307  Sum_probs=59.9

Q ss_pred             eEEEEEeccCCceEEEe------------ch----------hhhHHHHHHHHHhC---CCCCCCceeEEEEeCCe-----
Q 043174           76 FQLFRRLGSGIIRSVYI------------KK----------RNRVHIEKEILKML---DHPFLPSLFAEFEASHY-----  125 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~------------~~----------~~~~~~E~~~l~~~---~h~~iv~l~~~~~~~~~-----  125 (156)
                      |++.+.||+|+||.||+            |.          ...+.+|+.++..+   .|+||+++++.+.+.+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            57889999999999999            11          12456788877665   59999999999988776     


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++++|||+. ++|.+++.......+++.
T Consensus        81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~  107 (287)
T cd07838          81 LTLVFEHVD-QDLATYLSKCPKPGLPPE  107 (287)
T ss_pred             eEEEehhcc-cCHHHHHHHccCCCCCHH
Confidence            999999997 489999877533345544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.67  E-value=1.7e-08  Score=75.21  Aligned_cols=67  Identities=12%  Similarity=0.269  Sum_probs=54.4

Q ss_pred             CCeEEEEEeccCCceEEEe------------c---------hhhhHHHHHHHHHhCC-CCCCCceeEEEEeCCeEEEEEe
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K---------KRNRVHIEKEILKMLD-HPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~---------~~~~~~~E~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      ++|...+.||+|+||.||+            +         ....+..|+.++..+. |+||+++++.+.++...+++||
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e   83 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME   83 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence            4566778899999999997            1         2235678999999986 9999999999999999999999


Q ss_pred             ccCCCCHHHH
Q 043174          132 YCPGGDLLTV  141 (156)
Q Consensus       132 ~~~~g~L~~~  141 (156)
                      |+.. +|.++
T Consensus        84 ~~~~-~l~~l   92 (288)
T cd06616          84 LMDI-SLDKF   92 (288)
T ss_pred             cccC-CHHHH
Confidence            9874 55443

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=98.66  E-value=1.7e-08  Score=76.13  Aligned_cols=72  Identities=24%  Similarity=0.288  Sum_probs=61.3

Q ss_pred             CCCeEEEEEeccCCceEEEe-------------------c---hhhhHHHHHHHHHhCCCCC-CCceeEEEEeCC-----
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-------------------K---KRNRVHIEKEILKMLDHPF-LPSLFAEFEASH-----  124 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-------------------~---~~~~~~~E~~~l~~~~h~~-iv~l~~~~~~~~-----  124 (156)
                      ...|..++.||+|+||.||+                   +   ......+|+.+++.+.|+| ||.|++++.+..     
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~   89 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI   89 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence            34466677899999999999                   1   1234689999999999999 999999999877     


Q ss_pred             -eEEEEEeccCCCCHHHHHHhc
Q 043174          125 -YSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       125 -~~~lv~E~~~~g~L~~~l~~~  145 (156)
                       .+++|+||+. -||.+++...
T Consensus        90 ~~l~lvfe~~d-~DL~~ymd~~  110 (323)
T KOG0594|consen   90 GKLYLVFEFLD-RDLKKYMDSL  110 (323)
T ss_pred             ceEEEEEEeec-ccHHHHHHhc
Confidence             8999999997 5999999886

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.65  E-value=2.5e-08  Score=73.75  Aligned_cols=69  Identities=28%  Similarity=0.424  Sum_probs=59.5

Q ss_pred             eEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           76 FQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      |.+.+.||+|.||.||+                      ...+.+..|+.+++.++|+||+++++++.+.+.+++++||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            46678899999999998                      11235678999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhc
Q 043174          134 PGGDLLTVSQRQ  145 (156)
Q Consensus       134 ~~g~L~~~l~~~  145 (156)
                      + ++|.+++.+.
T Consensus        81 ~-~~l~~~i~~~   91 (282)
T cd07829          81 D-MDLKKYLDKR   91 (282)
T ss_pred             C-cCHHHHHHhh
Confidence            8 5999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.64  E-value=2.1e-07  Score=66.24  Aligned_cols=70  Identities=37%  Similarity=0.688  Sum_probs=62.5

Q ss_pred             eEEEEEeccCCceEEEe--------------------c-hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccC
Q 043174           76 FQLFRRLGSGIIRSVYI--------------------K-KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCP  134 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~--------------------~-~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~  134 (156)
                      |.+.+.||+|++|.||+                    + ..+.+.+|+..+..++|+|++++++.+......++++|+++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            46678899999999998                    1 45678889999999999999999999998899999999999


Q ss_pred             CCCHHHHHHhc
Q 043174          135 GGDLLTVSQRQ  145 (156)
Q Consensus       135 ~g~L~~~l~~~  145 (156)
                      +++|.+++...
T Consensus        81 ~~~L~~~~~~~   91 (225)
T smart00221       81 GGDLFDYLRKK   91 (225)
T ss_pred             CCCHHHHHHhc
Confidence            99999999875

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.62  E-value=1.8e-07  Score=70.15  Aligned_cols=83  Identities=17%  Similarity=0.271  Sum_probs=63.4

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe------------c---------hhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCe
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI------------K---------KRNRVHIEKEILKML-DHPFLPSLFAEFEASHY  125 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~------------~---------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~  125 (156)
                      ...+..++|.+.+.||+|+||.||+            +         ....+..|+.++... .|+||+++++.+.+...
T Consensus         9 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~   88 (296)
T cd06618           9 KYPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSD   88 (296)
T ss_pred             eccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCe
Confidence            3456778999999999999999999            1         122355677766666 49999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      +|++|||+. +.|..++... .+.+++
T Consensus        89 ~~~v~e~~~-~~l~~l~~~~-~~~l~~  113 (296)
T cd06618          89 VFICMELMS-TCLDKLLKRI-QGPIPE  113 (296)
T ss_pred             EEEEeeccC-cCHHHHHHHh-cCCCCH
Confidence            999999985 5777776653 234443

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=98.62  E-value=2.3e-08  Score=78.38  Aligned_cols=75  Identities=23%  Similarity=0.381  Sum_probs=62.4

Q ss_pred             ccCCCeEEEEEeccCCceEEEe---------------chhhhHHHHHHHHHh--CCCCCCCceeEEEEeCC----eEEEE
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI---------------KKRNRVHIEKEILKM--LDHPFLPSLFAEFEASH----YSRLV  129 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~---------------~~~~~~~~E~~~l~~--~~h~~iv~l~~~~~~~~----~~~lv  129 (156)
                      .....+.+.++||+|.||.||+               ...+.+.+|..|...  +.|+||+++++.-.-..    .++||
T Consensus       207 ~~l~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV  286 (534)
T KOG3653|consen  207 LELDPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV  286 (534)
T ss_pred             ccCCchhhHHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence            3456677888999999999999               345778999998876  48999999998654433    68999


Q ss_pred             EeccCCCCHHHHHHhc
Q 043174          130 IEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~  145 (156)
                      +||.+.|+|.+||+.+
T Consensus       287 t~fh~kGsL~dyL~~n  302 (534)
T KOG3653|consen  287 TEFHPKGSLCDYLKAN  302 (534)
T ss_pred             eeeccCCcHHHHHHhc
Confidence            9999999999999975

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.54  E-value=4.5e-07  Score=66.18  Aligned_cols=71  Identities=15%  Similarity=0.003  Sum_probs=57.7

Q ss_pred             cCCCeEEEEEeccCCceEEEe----------c-----------hhhh------HHHHHHHHHhCCCCCCCceeEEEEeC-
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI----------K-----------KRNR------VHIEKEILKMLDHPFLPSLFAEFEAS-  123 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~----------~-----------~~~~------~~~E~~~l~~~~h~~iv~l~~~~~~~-  123 (156)
                      ..++|.++++||.|+||.||+          |           ..+.      +.+|+..+..+.|++|..+...+.+. 
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~  108 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE  108 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence            357899999999999999999          1           1111      57899999999999999998876643 


Q ss_pred             -------CeEEEEEeccCCCCHHHHH
Q 043174          124 -------HYSRLVIEYCPGGDLLTVS  142 (156)
Q Consensus       124 -------~~~~lv~E~~~~g~L~~~l  142 (156)
                             +..+++|||++|.+|.+..
T Consensus       109 ~~~~~~~~~~~lvmEyi~G~tL~~~~  134 (232)
T PRK10359        109 RKTLRYAHTYIMLIEYIEGVELNDMP  134 (232)
T ss_pred             cccccccCCeEEEEEEECCccHHHhh
Confidence                   3588999999999997763

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.53  E-value=1.3e-07  Score=75.67  Aligned_cols=73  Identities=19%  Similarity=0.286  Sum_probs=63.9

Q ss_pred             cCCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      ....|+++++||.|+-+.||+                     +.+..+.+|+..|.++ .|.+||+|+++-..++.+|+|
T Consensus       359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv  438 (677)
T KOG0596|consen  359 KGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV  438 (677)
T ss_pred             CcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence            345588889999999999999                     3456789999999999 599999999998899999999


Q ss_pred             EeccCCCCHHHHHHhc
Q 043174          130 IEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~  145 (156)
                      |||-+ -||...|++.
T Consensus       439 mE~Gd-~DL~kiL~k~  453 (677)
T KOG0596|consen  439 MECGD-IDLNKILKKK  453 (677)
T ss_pred             eeccc-ccHHHHHHhc
Confidence            99765 5999999985

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.53  E-value=3.5e-07  Score=69.80  Aligned_cols=76  Identities=20%  Similarity=0.225  Sum_probs=58.9

Q ss_pred             CeEEEEEeccCCceEEEe--------------c----------hhhhHHHHHHHHHhC-CCCCCCceeEEEEe----CCe
Q 043174           75 QFQLFRRLGSGIIRSVYI--------------K----------KRNRVHIEKEILKML-DHPFLPSLFAEFEA----SHY  125 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~--------------~----------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~----~~~  125 (156)
                      +|.+.+.||+|+||.||+              |          ..+.+.+|+.++..+ +||||+++++....    ...
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            478899999999999998              1          123467899999998 59999999986433    245


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +++++||+. ++|.+.+...  ..+++.
T Consensus        81 ~~~~~e~~~-~~L~~~l~~~--~~~~~~  105 (332)
T cd07857          81 LYLYEELME-ADLHQIIRSG--QPLTDA  105 (332)
T ss_pred             EEEEEeccc-CCHHHHHhcC--CCCCHH
Confidence            889999986 6999998764  556554

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.44  E-value=6.5e-07  Score=72.34  Aligned_cols=77  Identities=17%  Similarity=0.220  Sum_probs=55.1

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe----------------------------ch----------------------hhhH
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI----------------------------KK----------------------RNRV   98 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~----------------------------~~----------------------~~~~   98 (156)
                      .++..++|.+.++||+|+||.||+                            |.                      .+..
T Consensus       140 ~r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~  219 (507)
T PLN03224        140 SRWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETG  219 (507)
T ss_pred             CCccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchh
Confidence            456788999999999999999995                            00                      0112


Q ss_pred             HHHHHHHHhCCCCCC-----CceeEEEEe--------CCeEEEEEeccCCCCHHHHHHhc
Q 043174           99 HIEKEILKMLDHPFL-----PSLFAEFEA--------SHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus        99 ~~E~~~l~~~~h~~i-----v~l~~~~~~--------~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ..|+.++..++|.++     +++++++..        .+..++||||+++|+|.+++...
T Consensus       220 ~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~  279 (507)
T PLN03224        220 MVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGK  279 (507)
T ss_pred             HHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhc
Confidence            336666667766544     556555532        35689999999999999999753

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.42  E-value=8.8e-07  Score=70.02  Aligned_cols=82  Identities=17%  Similarity=0.303  Sum_probs=64.7

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhCC-----C---CCCCceeEEEEe-
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKMLD-----H---PFLPSLFAEFEA-  122 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~~-----h---~~iv~l~~~~~~-  122 (156)
                      +....|.+.++||.|.|++||+                   ...+....||.+|++++     |   ..||+|++.|.- 
T Consensus        75 F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs  154 (590)
T KOG1290|consen   75 FNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS  154 (590)
T ss_pred             ccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence            3448899999999999999999                   23567889999999873     2   368899988865 


Q ss_pred             ---CCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          123 ---SHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       123 ---~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                         +.++|+|+|++ |-.|..+|+....+.++..
T Consensus       155 GpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~  187 (590)
T KOG1290|consen  155 GPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLS  187 (590)
T ss_pred             CCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHH
Confidence               45799999988 5689999987655555543

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.42  E-value=3.8e-07  Score=66.32  Aligned_cols=54  Identities=17%  Similarity=0.117  Sum_probs=44.5

Q ss_pred             HHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174           98 VHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus        98 ~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ...|...+....||||+++++.+.+....+++|||+++|+|.+++.+.  ..+++.
T Consensus        32 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~   85 (237)
T cd05576          32 YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKF--LNIPEE   85 (237)
T ss_pred             hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHh--cCCCHH
Confidence            455666666667999999999999999999999999999999999775  445543

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.41  E-value=9.1e-07  Score=72.09  Aligned_cols=69  Identities=20%  Similarity=0.205  Sum_probs=56.9

Q ss_pred             CeEEEEEeccCCceEEEe---------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           75 QFQLFRRLGSGIIRSVYI---------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~---------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      .|...+.||+|+||.||+               +           ..+.+.+|+.++..++|++++.......+....++
T Consensus       334 ~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~l  413 (535)
T PRK09605        334 RKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTI  413 (535)
T ss_pred             ccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEE
Confidence            345578899999999998               0           01346789999999999999988777777778899


Q ss_pred             EEeccCCCCHHHHHH
Q 043174          129 VIEYCPGGDLLTVSQ  143 (156)
Q Consensus       129 v~E~~~~g~L~~~l~  143 (156)
                      +|||++|++|.+++.
T Consensus       414 v~E~~~g~~L~~~l~  428 (535)
T PRK09605        414 VMEYIGGKDLKDVLE  428 (535)
T ss_pred             EEEecCCCcHHHHHH
Confidence            999999999998874

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.40  E-value=1.2e-06  Score=67.25  Aligned_cols=69  Identities=26%  Similarity=0.352  Sum_probs=55.8

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCC------
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASH------  124 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~------  124 (156)
                      .+.|.+.+.||+|+||.||+            +          ....+.+|+.++..++||||+++++++....      
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            36799999999999999998            1          1234678999999999999999999887543      


Q ss_pred             eEEEEEeccCCCCHHHHH
Q 043174          125 YSRLVIEYCPGGDLLTVS  142 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l  142 (156)
                      ..++++||+.. +|..++
T Consensus        94 ~~~lv~e~~~~-~l~~~~  110 (342)
T cd07879          94 DFYLVMPYMQT-DLQKIM  110 (342)
T ss_pred             eEEEEeccccc-CHHHHH
Confidence            46999999964 776654

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.37  E-value=1.1e-06  Score=62.79  Aligned_cols=65  Identities=20%  Similarity=0.244  Sum_probs=53.7

Q ss_pred             EEeccCCceEEEe----------ch----------------hhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           80 RRLGSGIIRSVYI----------KK----------------RNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        80 ~~lG~G~~g~V~~----------~~----------------~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      +.||+|++|.||+          +.                ...+.+|+.++..+.|++|.....++.+....+++|||+
T Consensus         2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   81 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI   81 (211)
T ss_pred             cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence            5689999999998          10                124678999999999999887777777778899999999


Q ss_pred             CCCCHHHHHHh
Q 043174          134 PGGDLLTVSQR  144 (156)
Q Consensus       134 ~~g~L~~~l~~  144 (156)
                      +|++|.+++..
T Consensus        82 ~G~~L~~~~~~   92 (211)
T PRK14879         82 EGEPLKDLINS   92 (211)
T ss_pred             CCcCHHHHHHh
Confidence            99999998865

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.34  E-value=2.9e-06  Score=59.10  Aligned_cols=64  Identities=38%  Similarity=0.627  Sum_probs=55.7

Q ss_pred             eccCCceEEEe-----------------c----hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCHHH
Q 043174           82 LGSGIIRSVYI-----------------K----KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLT  140 (156)
Q Consensus        82 lG~G~~g~V~~-----------------~----~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~~  140 (156)
                      ||+|++|.||+                 .    ..+.+.+|+.++..+.|++|+++++.+......++++|++++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            57788888877                 1    13568999999999999999999999999899999999999999999


Q ss_pred             HHHhc
Q 043174          141 VSQRQ  145 (156)
Q Consensus       141 ~l~~~  145 (156)
                      ++...
T Consensus        81 ~~~~~   85 (215)
T cd00180          81 LLKEN   85 (215)
T ss_pred             HHHhc
Confidence            99864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=98.32  E-value=2.9e-07  Score=70.55  Aligned_cols=82  Identities=21%  Similarity=0.291  Sum_probs=66.3

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhCCC--C----CCCceeEEEEeCCe
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKMLDH--P----FLPSLFAEFEASHY  125 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~~h--~----~iv~l~~~~~~~~~  125 (156)
                      .....|.+.+.||+|.||+|..                   +..+..+.|++++.++.+  |    -+|.+.++|+-.++
T Consensus        86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh  165 (415)
T KOG0671|consen   86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH  165 (415)
T ss_pred             ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence            3467799999999999999988                   456778999999999832  2    46788888999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +|+|.|.+ |-+++++|+++....|+-+
T Consensus       166 iCivfell-G~S~~dFlk~N~y~~fpi~  192 (415)
T KOG0671|consen  166 ICIVFELL-GLSTFDFLKENNYIPFPID  192 (415)
T ss_pred             eEEEEecc-ChhHHHHhccCCccccchH
Confidence            99999977 5699999998645555544

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.27  E-value=2.3e-06  Score=60.57  Aligned_cols=64  Identities=20%  Similarity=0.263  Sum_probs=48.7

Q ss_pred             EeccCCceEEEe----------ch----------------hhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccC
Q 043174           81 RLGSGIIRSVYI----------KK----------------RNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCP  134 (156)
Q Consensus        81 ~lG~G~~g~V~~----------~~----------------~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~  134 (156)
                      .||+|+||.||+          |.                ...+.+|+.++..+.|+++....-.+.+....+++|||++
T Consensus         1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~   80 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE   80 (199)
T ss_pred             CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence            379999999999          10                1335679999999988776555444556667899999999


Q ss_pred             CCCHHHHHHh
Q 043174          135 GGDLLTVSQR  144 (156)
Q Consensus       135 ~g~L~~~l~~  144 (156)
                      |++|.+++..
T Consensus        81 g~~l~~~~~~   90 (199)
T TIGR03724        81 GKPLKDVIEE   90 (199)
T ss_pred             CccHHHHHhh
Confidence            9999988754

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.16  E-value=4.2e-07  Score=78.17  Aligned_cols=52  Identities=27%  Similarity=0.389  Sum_probs=43.6

Q ss_pred             cCCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS  123 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~  123 (156)
                      ...+|+.++.||+|+||.||+                     +....+.+|+.++.+++|||||+++..|...
T Consensus       477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs  549 (1351)
T KOG1035|consen  477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVES  549 (1351)
T ss_pred             HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhcc
Confidence            357788899999999999999                     2234578999999999999999999877543

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.10  E-value=5.1e-06  Score=67.35  Aligned_cols=74  Identities=24%  Similarity=0.351  Sum_probs=62.7

Q ss_pred             cCCCeEEEEEeccCCceEEEe----------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEEeccC
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI----------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCP  134 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~----------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~E~~~  134 (156)
                      ..+.|.+...+|.|+|+.|..                +......+|+.++... .|+||+++++++.+...+|+|||.+.
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~  399 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLD  399 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeecceecCCceeeeeehhcc
Confidence            467788888899999998877                2223467788777665 79999999999999999999999999


Q ss_pred             CCCHHHHHHhc
Q 043174          135 GGDLLTVSQRQ  145 (156)
Q Consensus       135 ~g~L~~~l~~~  145 (156)
                      ||.|.+.|...
T Consensus       400 g~ell~ri~~~  410 (612)
T KOG0603|consen  400 GGELLRRIRSK  410 (612)
T ss_pred             ccHHHHHHHhc
Confidence            99999999875

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.09  E-value=1.6e-05  Score=57.32  Aligned_cols=62  Identities=21%  Similarity=0.178  Sum_probs=49.0

Q ss_pred             EEEEEeccCCceEEEe------c-----------h-----hhhHHHHHHHHHhCC-CCCCCceeEEEEeCCeEEEEEecc
Q 043174           77 QLFRRLGSGIIRSVYI------K-----------K-----RNRVHIEKEILKMLD-HPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        77 ~~~~~lG~G~~g~V~~------~-----------~-----~~~~~~E~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      .+...|++|+||.|++      +           .     ...+.+|+++|..+. +++|++++++    +..+++|||+
T Consensus         5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI   80 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL   80 (218)
T ss_pred             ccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence            3467899999999999      0           0     114788999999994 5889999875    4479999999


Q ss_pred             CCCCHHHHH
Q 043174          134 PGGDLLTVS  142 (156)
Q Consensus       134 ~~g~L~~~l  142 (156)
                      .|.+|.+.+
T Consensus        81 ~G~~L~~~~   89 (218)
T PRK12274         81 AGAAMYQRP   89 (218)
T ss_pred             cCccHHhhh
Confidence            999987654

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.02  E-value=9.2e-07  Score=65.37  Aligned_cols=70  Identities=16%  Similarity=0.249  Sum_probs=53.8

Q ss_pred             ccCCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHh-CCCCCCCceeEEEEeCCeEEE
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKM-LDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~-~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      +..++++-+..||.|+||.|++                     +..+.+..|.+...+ -+.||||++||..-.++..++
T Consensus        61 F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWi  140 (361)
T KOG1006|consen   61 FTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWI  140 (361)
T ss_pred             cccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceee
Confidence            3345555567899999999999                     344567777775554 478999999999888999999


Q ss_pred             EEeccCCCCHHHH
Q 043174          129 VIEYCPGGDLLTV  141 (156)
Q Consensus       129 v~E~~~~g~L~~~  141 (156)
                      .||++.- +|..+
T Consensus       141 CMELMd~-SlDkl  152 (361)
T KOG1006|consen  141 CMELMDI-SLDKL  152 (361)
T ss_pred             eHHHHhh-hHHHH
Confidence            9999974 65444

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=98.01  E-value=3.4e-07  Score=66.38  Aligned_cols=72  Identities=22%  Similarity=0.421  Sum_probs=59.8

Q ss_pred             cCCCeEEEEEeccCCceEEEe-----------------chhhhHHHHHHHHHhCC-CCCCCceeEEEEeCC--eEEEEEe
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI-----------------KKRNRVHIEKEILKMLD-HPFLPSLFAEFEASH--YSRLVIE  131 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~-----------------~~~~~~~~E~~~l~~~~-h~~iv~l~~~~~~~~--~~~lv~E  131 (156)
                      ..++|++.+.+|+|.|+.|+.                 -....+.+|+.||..+. ||||++|+++..|+.  ...+++|
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE  115 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFE  115 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhh
Confidence            458899999999999999998                 12356899999999996 999999999998854  5789999


Q ss_pred             ccCCCCHHHHHH
Q 043174          132 YCPGGDLLTVSQ  143 (156)
Q Consensus       132 ~~~~g~L~~~l~  143 (156)
                      |+.+-|...+..
T Consensus       116 ~v~n~Dfk~ly~  127 (338)
T KOG0668|consen  116 YVNNTDFKQLYP  127 (338)
T ss_pred             hhccccHHHHhh
Confidence            999887555543

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.01  E-value=5.1e-06  Score=58.93  Aligned_cols=50  Identities=18%  Similarity=0.065  Sum_probs=32.3

Q ss_pred             HHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          100 IEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       100 ~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      .|+.++..+.++++...... .... .++||||++|+++...+.+.  +.++++
T Consensus        68 ~E~~~l~~l~~~~v~~p~~~-~~~~-~~iVmE~i~g~~l~~~~~~~--~~~~~~  117 (190)
T cd05147          68 KEMRNLKRLVTAGIPCPEPI-LLKS-HVLVMEFIGDDGWAAPRLKD--APLSES  117 (190)
T ss_pred             HHHHHHHHHHHCCCCCCcEE-EecC-CEEEEEEeCCCCCcchhhhc--CCCCHH
Confidence            48999999987776443322 2222 38999999998776554332  455543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PHA02882 putative serine/threonine kinase; Provisional

Probab=97.95  E-value=4.9e-05  Score=57.04  Aligned_cols=73  Identities=14%  Similarity=0.202  Sum_probs=48.5

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-----c----------h----hhhHH---------------HHHHHHHhCCCCCCCce
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-----K----------K----RNRVH---------------IEKEILKMLDHPFLPSL  116 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-----~----------~----~~~~~---------------~E~~~l~~~~h~~iv~l  116 (156)
                      +....|++.+.||+|+||.||+     .          .    .+.+.               .+...+..+.|++|+++
T Consensus         9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~   88 (294)
T PHA02882          9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY   88 (294)
T ss_pred             cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence            3456899999999999999998     0          0    00111               11223445689999999


Q ss_pred             eEEEEeCC----eEEEEEeccCCCCHHHHHHh
Q 043174          117 FAEFEASH----YSRLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       117 ~~~~~~~~----~~~lv~E~~~~g~L~~~l~~  144 (156)
                      +++.....    ..++++|++. .++.+.++.
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  119 (294)
T PHA02882         89 YGCGSFKRCRMYYRFILLEKLV-ENTKEIFKR  119 (294)
T ss_pred             EEeeeEecCCceEEEEEEehhc-cCHHHHHHh
Confidence            98765433    3577888775 366666655

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=97.93  E-value=2.6e-05  Score=55.73  Aligned_cols=51  Identities=41%  Similarity=0.716  Sum_probs=47.6

Q ss_pred             hhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCHHHHHHhc
Q 043174           95 RNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus        95 ~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      .+.+.+|+.+++.++|+||+++++.+......++++||+++++|..++...
T Consensus        31 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~   81 (244)
T smart00220       31 RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKR   81 (244)
T ss_pred             HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhc
Confidence            578899999999999999999999999999999999999999999999764

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.92  E-value=2.9e-07  Score=67.58  Aligned_cols=72  Identities=22%  Similarity=0.394  Sum_probs=57.4

Q ss_pred             CCCeEEEEEeccCCceEEEe-------ch---------------hhhHHHHHHHHHhCCCCCCCceeEEEEe--------
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-------KK---------------RNRVHIEKEILKMLDHPFLPSLFAEFEA--------  122 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-------~~---------------~~~~~~E~~~l~~~~h~~iv~l~~~~~~--------  122 (156)
                      ...|....+||+|.||.||+       +.               -....+|+++|..+.|+|++.++.++..        
T Consensus        16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~   95 (376)
T KOG0669|consen   16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD   95 (376)
T ss_pred             chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence            35566677899999999998       11               1246789999999999999999876644        


Q ss_pred             CCeEEEEEeccCCCCHHHHHHhc
Q 043174          123 SHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       123 ~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ...+|+|+++|+. ||+.+|.+.
T Consensus        96 r~t~ylVf~~ceh-DLaGlLsn~  117 (376)
T KOG0669|consen   96 RATFYLVFDFCEH-DLAGLLSNR  117 (376)
T ss_pred             cceeeeeHHHhhh-hHHHHhcCc
Confidence            2359999999986 999999764

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.86  E-value=7.8e-05  Score=56.99  Aligned_cols=77  Identities=26%  Similarity=0.471  Sum_probs=60.7

Q ss_pred             CeEEEEEeccCCceEEEe------c-------------hh--hhHHHHHHHHHhCCC----CCCCceeEEE-EeCCeEEE
Q 043174           75 QFQLFRRLGSGIIRSVYI------K-------------KR--NRVHIEKEILKMLDH----PFLPSLFAEF-EASHYSRL  128 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~------~-------------~~--~~~~~E~~~l~~~~h----~~iv~l~~~~-~~~~~~~l  128 (156)
                      .|.+.+.||+|+||.||.      .             ..  ..+..|+.++..+..    +++..+++.. ..+..-|+
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            799999999999999998      0             11  157789999998862    5888888888 47778899


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      ||+.+ |.+|.++.+..+.+.|+.
T Consensus        99 VM~l~-G~sL~dl~~~~~~~~fs~  121 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNPPGRFSR  121 (322)
T ss_pred             EEecc-CccHHHHHHhCCCCCcCH
Confidence            99976 779999887764455553

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=97.80  E-value=3.9e-05  Score=54.26  Aligned_cols=41  Identities=20%  Similarity=0.056  Sum_probs=28.9

Q ss_pred             HHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCHHHH
Q 043174           99 HIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTV  141 (156)
Q Consensus        99 ~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~~~  141 (156)
                      ..|...+..+.++++..........  .++||||++|+++...
T Consensus        67 ~~E~~~l~~l~~~~i~~p~~~~~~~--~~lVmE~~~g~~~~~~  107 (190)
T cd05145          67 EKEFRNLKRLYEAGVPVPEPILLKK--NVLVMEFIGDDGSPAP  107 (190)
T ss_pred             HHHHHHHHHHHhCCCCCceEEEecC--CEEEEEEecCCCchhh
Confidence            5788889999999875544433322  4899999998865443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=97.77  E-value=1.8e-05  Score=58.95  Aligned_cols=80  Identities=13%  Similarity=0.236  Sum_probs=58.4

Q ss_pred             cCCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCC-CCCCCceeEEEEeCCeEEEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLD-HPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~-h~~iv~l~~~~~~~~~~~lv  129 (156)
                      ..++++.+..||.|+.|.|++                     +....+...++++...+ .|+||+.+|+|..+..+++.
T Consensus        90 dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~Ic  169 (391)
T KOG0983|consen   90 DINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFIC  169 (391)
T ss_pred             ChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHH
Confidence            345566677899999999999                     22345666777776664 89999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCC
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||.+.  ...+.|.++-.+.++|.
T Consensus       170 MelMs--~C~ekLlkrik~piPE~  191 (391)
T KOG0983|consen  170 MELMS--TCAEKLLKRIKGPIPER  191 (391)
T ss_pred             HHHHH--HHHHHHHHHhcCCchHH
Confidence            99874  44444433324667764

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=97.75  E-value=3.6e-06  Score=62.46  Aligned_cols=71  Identities=21%  Similarity=0.364  Sum_probs=57.7

Q ss_pred             CCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhC-CCCCCCceeE-EEEeCCeEEEEEec
Q 043174           74 DQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKML-DHPFLPSLFA-EFEASHYSRLVIEY  132 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~-~~~~~~~~~lv~E~  132 (156)
                      +.|.+.+.||+|-||.+.+                   -.+..|.+|...---+ .|.||+.-|+ .|++.+...+++||
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~  103 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF  103 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence            6689999999999999988                   1245677777654445 5899998876 68888889999999


Q ss_pred             cCCCCHHHHHHh
Q 043174          133 CPGGDLLTVSQR  144 (156)
Q Consensus       133 ~~~g~L~~~l~~  144 (156)
                      +|.|||..-+..
T Consensus       104 aP~gdL~snv~~  115 (378)
T KOG1345|consen  104 APRGDLRSNVEA  115 (378)
T ss_pred             CccchhhhhcCc
Confidence            999999987765

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=97.75  E-value=0.00031  Score=51.59  Aligned_cols=70  Identities=33%  Similarity=0.588  Sum_probs=60.8

Q ss_pred             eEEEEEeccCCceEEEe------------------c--hhhhHHHHHHHHHhCCCC-CCCceeEEEEeCCeEEEEEeccC
Q 043174           76 FQLFRRLGSGIIRSVYI------------------K--KRNRVHIEKEILKMLDHP-FLPSLFAEFEASHYSRLVIEYCP  134 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~------------------~--~~~~~~~E~~~l~~~~h~-~iv~l~~~~~~~~~~~lv~E~~~  134 (156)
                      |.+...||.|+||.||.                  .  ....+.+|+.++..+.|+ +|+.+.+.+......+++++++.
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~   81 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVD   81 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEeccEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCC
Confidence            67888999999999998                  1  355688999999999888 79999999988888999999999


Q ss_pred             CCCHHHHHHhc
Q 043174          135 GGDLLTVSQRQ  145 (156)
Q Consensus       135 ~g~L~~~l~~~  145 (156)
                      ++++.+++...
T Consensus        82 ~~~l~~~~~~~   92 (384)
T COG0515          82 GGSLEDLLKKI   92 (384)
T ss_pred             CCcHHHHHHhc
Confidence            99999777754

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=97.75  E-value=6.6e-05  Score=61.77  Aligned_cols=79  Identities=19%  Similarity=0.131  Sum_probs=50.3

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe----ch------------h-hhHHHHHHHHHhC---CCCCCCceeEE------E
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI----KK------------R-NRVHIEKEILKML---DHPFLPSLFAE------F  120 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~----~~------------~-~~~~~E~~~l~~~---~h~~iv~l~~~------~  120 (156)
                      ....+..++|.+.+.||+|+||.||+    ..            . .....|+.+...+   .+.++..+...      .
T Consensus       125 ~~~~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~  204 (566)
T PLN03225        125 FRPSFKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNERVRRACPNSCADFVYGFLEPVSS  204 (566)
T ss_pred             cCCCCccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHHHHhhchhhHHHHHHhhhccccc
Confidence            34566789999999999999999998    10            0 0112232222222   22222222211      2


Q ss_pred             EeCCeEEEEEeccCCCCHHHHHHhc
Q 043174          121 EASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       121 ~~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      .....+++++||+.+++|.+++...
T Consensus       205 ~~~~~~~LV~ey~~~gsL~~~l~~~  229 (566)
T PLN03225        205 KKEDEYWLVWRYEGESTLADLMQSK  229 (566)
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhc
Confidence            3466799999999999999999764

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=97.60  E-value=0.00064  Score=53.17  Aligned_cols=75  Identities=21%  Similarity=0.119  Sum_probs=59.8

Q ss_pred             ccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCCCCCCCceeEEE-EeC
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEF-EAS  123 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~-~~~  123 (156)
                      +....+.+..++-+|.||+||.                          -+...+..|.-.+..+.|||+..+.++. ++.
T Consensus       281 v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~  360 (563)
T KOG1024|consen  281 VQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDY  360 (563)
T ss_pred             hhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeecc
Confidence            4445577788899999999999                          1233467777777788999999999865 456


Q ss_pred             CeEEEEEeccCCCCHHHHHHhc
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ...++++.+..-|+|..+|+..
T Consensus       361 ~~P~V~y~~~~~gNLK~FL~~C  382 (563)
T KOG1024|consen  361 ATPFVLYPATGVGNLKSFLQIC  382 (563)
T ss_pred             CcceEEEeccCcchHHHHHHHh
Confidence            7788899999999999999864

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=97.49  E-value=6.9e-05  Score=58.26  Aligned_cols=73  Identities=19%  Similarity=0.288  Sum_probs=62.3

Q ss_pred             cCCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      ....|..+.+||+|.|+.||+                     .....+.+|+++|..+ .+.||+++.+++...+.+.+|
T Consensus        34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~iv  113 (418)
T KOG1167|consen   34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIV  113 (418)
T ss_pred             hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEE
Confidence            356789999999999999998                     1224588999999998 599999999999999999999


Q ss_pred             EeccCCCCHHHHHHh
Q 043174          130 IEYCPGGDLLTVSQR  144 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~  144 (156)
                      +||.+.-+-.+++..
T Consensus       114 lp~~~H~~f~~l~~~  128 (418)
T KOG1167|consen  114 LPYFEHDRFRDLYRS  128 (418)
T ss_pred             ecccCccCHHHHHhc
Confidence            999998877776654

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.44  E-value=0.00023  Score=47.15  Aligned_cols=61  Identities=26%  Similarity=0.419  Sum_probs=49.7

Q ss_pred             EEEeccCCceEEEe--------------ch--hhhHHHHHHHHHhCCC--CCCCceeEEEEeCCeEEEEEeccCCCCHH
Q 043174           79 FRRLGSGIIRSVYI--------------KK--RNRVHIEKEILKMLDH--PFLPSLFAEFEASHYSRLVIEYCPGGDLL  139 (156)
Q Consensus        79 ~~~lG~G~~g~V~~--------------~~--~~~~~~E~~~l~~~~h--~~iv~l~~~~~~~~~~~lv~E~~~~g~L~  139 (156)
                      .+.||+|.++.||+              ..  ...+..|+.++..+.+  ..+++++......+..+++|||++|+.+.
T Consensus         3 ~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~   81 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKDEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLD   81 (155)
T ss_pred             ceecccccccceEEEEecCCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecc
Confidence            46788999999887              11  2368899999999976  58899988888888899999999988765

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=97.41  E-value=4.4e-05  Score=54.82  Aligned_cols=81  Identities=15%  Similarity=0.211  Sum_probs=58.4

Q ss_pred             cCCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHH-hCCCCCCCceeEEEEeCCeEEEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILK-MLDHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~-~~~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      .-+++..+..||+|+||.|-+                     +......+|+.+.. ....|++|++||.+.+.+.+++.
T Consensus        44 ~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIc  123 (282)
T KOG0984|consen   44 PADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWIC  123 (282)
T ss_pred             chhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEe
Confidence            345556677899999998766                     33445777887655 45899999999999999999999


Q ss_pred             EeccCCCCHHHHHHhc--CCCCCCCC
Q 043174          130 IEYCPGGDLLTVSQRQ--RRLRFSIP  153 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~--~~~~~~e~  153 (156)
                      ||.+.. +|..+-++-  .++.++|.
T Consensus       124 ME~M~t-Sldkfy~~v~~~g~~ipE~  148 (282)
T KOG0984|consen  124 MELMDT-SLDKFYRKVLKKGGTIPED  148 (282)
T ss_pred             HHHhhh-hHHHHHHHHHhcCCcCchH
Confidence            999874 666554321  13555553

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.36  E-value=0.00053  Score=50.49  Aligned_cols=75  Identities=20%  Similarity=0.344  Sum_probs=55.8

Q ss_pred             CccCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCC-CCCCceeEEEEeCCeEEEEE
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDH-PFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h-~~iv~l~~~~~~~~~~~lv~  130 (156)
                      -+....|.+++.||.|+||.+|.                  .....+..|..+-..+++ ..|..+..+......-.+||
T Consensus        11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM   90 (341)
T KOG1163|consen   11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM   90 (341)
T ss_pred             heeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence            34568899999999999999999                  122357889998888864 45556555555566778999


Q ss_pred             eccCCCCHHHHHHhc
Q 043174          131 EYCPGGDLLTVSQRQ  145 (156)
Q Consensus       131 E~~~~g~L~~~l~~~  145 (156)
                      |++ |.+|.+++.-.
T Consensus        91 dLL-GPsLEdLfnfC  104 (341)
T KOG1163|consen   91 DLL-GPSLEDLFNFC  104 (341)
T ss_pred             ecc-CccHHHHHHHH
Confidence            977 67887776543

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=97.33  E-value=0.00027  Score=59.40  Aligned_cols=65  Identities=17%  Similarity=0.274  Sum_probs=53.7

Q ss_pred             EEEeccCCceE-EEe---------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEEeccCCCCHHHH
Q 043174           79 FRRLGSGIIRS-VYI---------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTV  141 (156)
Q Consensus        79 ~~~lG~G~~g~-V~~---------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~~~  141 (156)
                      .+.+|.|+-|. ||+               .....+.+||..|+.- .|||||++++.-.+..++||+.|.|.. +|.++
T Consensus       514 ~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-sL~dl  592 (903)
T KOG1027|consen  514 KEILGYGSNGTVVFRGVYEGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-SLQDL  592 (903)
T ss_pred             HHHcccCCCCcEEEEEeeCCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-hHHHH
Confidence            45688887764 666               1223578999999987 699999999999999999999999975 99999


Q ss_pred             HHh
Q 043174          142 SQR  144 (156)
Q Consensus       142 l~~  144 (156)
                      +..
T Consensus       593 ie~  595 (903)
T KOG1027|consen  593 IES  595 (903)
T ss_pred             Hhc
Confidence            987

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.26  E-value=0.00054  Score=52.51  Aligned_cols=78  Identities=19%  Similarity=0.329  Sum_probs=58.6

Q ss_pred             CCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEEecc
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      .-+|.+.++||+|+||..+.                  ...-.+..|...-+.+ ..+.|...|.+-..+.+=.+|+|++
T Consensus        27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL  106 (449)
T KOG1165|consen   27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL  106 (449)
T ss_pred             cccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence            45699999999999999998                  1233567777777766 5788888887777677777999977


Q ss_pred             CCCCHHHHHHhcCCCCCCC
Q 043174          134 PGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~~e  152 (156)
                       |.+|.++..-. ++.|+.
T Consensus       107 -GPSLEDLFD~C-gR~FSv  123 (449)
T KOG1165|consen  107 -GPSLEDLFDLC-GRRFSV  123 (449)
T ss_pred             -CcCHHHHHHHh-cCcccH
Confidence             67888877655 455654

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=97.21  E-value=4.2e-05  Score=62.17  Aligned_cols=71  Identities=28%  Similarity=0.524  Sum_probs=58.0

Q ss_pred             EeccCCceEEEe-------------------------chhhhHHHHHHHHHhCC-CCCCCceeEEEEeCCeEEEEEeccC
Q 043174           81 RLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLD-HPFLPSLFAEFEASHYSRLVIEYCP  134 (156)
Q Consensus        81 ~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~E~~~  134 (156)
                      ++|+|+||.|++                         +.......|..++..++ ||++|+++..++.+..++++++|..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            378999999988                         22235566788888886 9999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCCCCC
Q 043174          135 GGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       135 ~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||+|+..+...  ..|.|.
T Consensus        81 gg~lft~l~~~--~~f~~~   97 (612)
T KOG0603|consen   81 GGDLFTRLSKE--VMFDEL   97 (612)
T ss_pred             cchhhhccccC--CchHHH
Confidence            99999999875  444443

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.17  E-value=5.2e-05  Score=56.59  Aligned_cols=80  Identities=19%  Similarity=0.206  Sum_probs=60.6

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC-----e
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH-----Y  125 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~-----~  125 (156)
                      ..+.+..+.||-|+||.||.                      -.-..+.+|+++|...+|.|++...+..+...     .
T Consensus        52 q~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqE  131 (449)
T KOG0664|consen   52 QQDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQE  131 (449)
T ss_pred             cccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHH
Confidence            34566678999999999996                      11245788999999999999999998887654     4


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      +|++.|++. .||-++|..-  ..++.+++
T Consensus       132 iYV~TELmQ-SDLHKIIVSP--Q~Ls~DHv  158 (449)
T KOG0664|consen  132 LYVLTELMQ-SDLHKIIVSP--QALTPDHV  158 (449)
T ss_pred             HHHHHHHHH-hhhhheeccC--CCCCcchh
Confidence            778888886 4888777652  55665554

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.11  E-value=0.00066  Score=48.12  Aligned_cols=63  Identities=29%  Similarity=0.303  Sum_probs=45.3

Q ss_pred             eEEEEEeccCCceEEEe-----------ch------------------------------hhhHHHHHHHHHhCCCCC--
Q 043174           76 FQLFRRLGSGIIRSVYI-----------KK------------------------------RNRVHIEKEILKMLDHPF--  112 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~-----------~~------------------------------~~~~~~E~~~l~~~~h~~--  112 (156)
                      |.+.+.||+|+||.||+           |.                              ......|..++..+.+++  
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~   96 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP   96 (198)
T ss_pred             hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence            67778999999999998           10                              012567888888887764  


Q ss_pred             CCceeEEEEeCCeEEEEEeccCCCCHHHHH
Q 043174          113 LPSLFAEFEASHYSRLVIEYCPGGDLLTVS  142 (156)
Q Consensus       113 iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l  142 (156)
                      +...++    ....+++|||++|++|...+
T Consensus        97 v~~~~~----~~~~~lv~e~~~g~~L~~~~  122 (198)
T cd05144          97 VPKPID----WNRHAVVMEYIDGVELYRVR  122 (198)
T ss_pred             CCceee----cCCceEEEEEeCCcchhhcc
Confidence            444433    34568999999999886654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=96.91  E-value=0.00013  Score=54.52  Aligned_cols=74  Identities=16%  Similarity=0.314  Sum_probs=59.2

Q ss_pred             cCCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      ...++.++.+|.+..-|..|+                    +.-+.|..|.--|+-+.||||+.+++.+..+.++.++..
T Consensus       188 d~~~lnl~tkl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq  267 (448)
T KOG0195|consen  188 DVSSLNLITKLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQ  267 (448)
T ss_pred             chhhhhhhhhhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeee
Confidence            344455566677777777776                    223467778777888899999999999999999999999


Q ss_pred             ccCCCCHHHHHHhc
Q 043174          132 YCPGGDLLTVSQRQ  145 (156)
Q Consensus       132 ~~~~g~L~~~l~~~  145 (156)
                      |++-|+|+..|...
T Consensus       268 ~mp~gslynvlhe~  281 (448)
T KOG0195|consen  268 YMPFGSLYNVLHEQ  281 (448)
T ss_pred             eccchHHHHHHhcC
Confidence            99999999999875

>smart00090 RIO RIO-like kinase

Probab=96.88  E-value=0.00088  Score=49.19  Aligned_cols=66  Identities=18%  Similarity=0.057  Sum_probs=45.1

Q ss_pred             CeEEEEEeccCCceEEEe-------------chh--------------------------------hhHHHHHHHHHhCC
Q 043174           75 QFQLFRRLGSGIIRSVYI-------------KKR--------------------------------NRVHIEKEILKMLD  109 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~-------------~~~--------------------------------~~~~~E~~~l~~~~  109 (156)
                      .|.+.+.||+|+||.||+             |..                                ..+..|+.++..+.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            477889999999999988             100                                11457999999886


Q ss_pred             CCCCCceeEEEEeCCeEEEEEeccCCCCHHHHH
Q 043174          110 HPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVS  142 (156)
Q Consensus       110 h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l  142 (156)
                      +. ++.....+... ..++||||++|++|...+
T Consensus       109 ~~-~i~~p~~~~~~-~~~lV~E~~~g~~L~~~~  139 (237)
T smart00090      109 EA-GVPVPKPIAWR-RNVLVMEFIGGDGLPAPR  139 (237)
T ss_pred             hc-CCCCCeeeEec-CceEEEEEecCCcccccc
Confidence            53 33333333322 358999999998876654

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=96.73  E-value=0.0011  Score=57.23  Aligned_cols=81  Identities=26%  Similarity=0.349  Sum_probs=53.9

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-----------chh-h----hHHHHHHHHHhCC---CCCCCceeEEEEeCCeEEEEEe
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-----------KKR-N----RVHIEKEILKMLD---HPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-----------~~~-~----~~~~E~~~l~~~~---h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      +....|.|.+.||+|+||.||+           |.. .    .+-.-.+++.+|+   -+-|.++..++.-.+.-++|+|
T Consensus       695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~e  774 (974)
T KOG1166|consen  695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSE  774 (974)
T ss_pred             ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeee
Confidence            3456788899999999999999           100 0    0111122333333   2344555555566677889999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |.+.|+|.+++...  +.++|.
T Consensus       775 y~~~Gtlld~~N~~--~~m~e~  794 (974)
T KOG1166|consen  775 YSPYGTLLDLINTN--KVMDEY  794 (974)
T ss_pred             ccccccHHHhhccC--CCCCch
Confidence            99999999999854  667664

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=96.58  E-value=0.0018  Score=52.43  Aligned_cols=89  Identities=20%  Similarity=0.173  Sum_probs=67.2

Q ss_pred             hHHHHHHHhhhccCCccCCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhCC------C
Q 043174           56 AKRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKMLD------H  110 (156)
Q Consensus        56 ~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~~------h  110 (156)
                      +|..+...-.-.-+.+.-..|.+....|+|-|+.|..                   -+...-..|++||.+|+      -
T Consensus       414 NWdDaEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk  493 (752)
T KOG0670|consen  414 NWDDAEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDK  493 (752)
T ss_pred             CcccccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhh
Confidence            3443333222333445567789999999999999998                   12345688999999984      3


Q ss_pred             CCCCceeEEEEeCCeEEEEEeccCCCCHHHHHHhc
Q 043174          111 PFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       111 ~~iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      -++++|+..|.-.+++|||+|-+. -.|.+.|++.
T Consensus       494 ~Hclrl~r~F~hknHLClVFE~Ls-lNLRevLKKy  527 (752)
T KOG0670|consen  494 FHCLRLFRHFKHKNHLCLVFEPLS-LNLREVLKKY  527 (752)
T ss_pred             hHHHHHHHHhhhcceeEEEehhhh-chHHHHHHHh
Confidence            488999999999999999999775 5999999885

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=96.41  E-value=0.015  Score=42.78  Aligned_cols=48  Identities=27%  Similarity=0.291  Sum_probs=35.0

Q ss_pred             hHHHHHHHHHhCCCCCC--CceeEEEEe-CCe---EEEEEeccCC-CCHHHHHHh
Q 043174           97 RVHIEKEILKMLDHPFL--PSLFAEFEA-SHY---SRLVIEYCPG-GDLLTVSQR  144 (156)
Q Consensus        97 ~~~~E~~~l~~~~h~~i--v~l~~~~~~-~~~---~~lv~E~~~~-g~L~~~l~~  144 (156)
                      .+.+|+.++..+.|++|  +..++.... ...   .++|||+++| .+|.+++..
T Consensus        86 r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~  140 (239)
T PRK01723         86 RAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQE  140 (239)
T ss_pred             HHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhc
Confidence            46779999999988775  666665433 222   3599999997 689888865

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=95.37  E-value=0.0037  Score=51.21  Aligned_cols=32  Identities=13%  Similarity=-0.006  Sum_probs=20.9

Q ss_pred             CCCCCceeEEEEe-CCeEEEEEeccCCCCHHHH
Q 043174          110 HPFLPSLFAEFEA-SHYSRLVIEYCPGGDLLTV  141 (156)
Q Consensus       110 h~~iv~l~~~~~~-~~~~~lv~E~~~~g~L~~~  141 (156)
                      +.+.+.+..++.+ ...-+++|||+.|+.+.++
T Consensus       219 ~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~  251 (537)
T PRK04750        219 DSDMLYVPEVYWDYCSETVMVMERMYGIPVSDV  251 (537)
T ss_pred             CCCCeecceeecccCCCceEEEeeecCccHHhH
Confidence            3444444444433 3446799999999999764

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=95.35  E-value=0.039  Score=39.17  Aligned_cols=48  Identities=23%  Similarity=0.178  Sum_probs=35.2

Q ss_pred             hhhHHHHHHHHHhCCC--CCCCceeEEEEeC---CeEEEEEeccCCCCHHHHH
Q 043174           95 RNRVHIEKEILKMLDH--PFLPSLFAEFEAS---HYSRLVIEYCPGGDLLTVS  142 (156)
Q Consensus        95 ~~~~~~E~~~l~~~~h--~~iv~l~~~~~~~---~~~~lv~E~~~~g~L~~~l  142 (156)
                      ...+..|+.++..+.+  .++.+++.+....   +..+++|||++|+++...+
T Consensus        39 ~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~   91 (223)
T cd05154          39 AHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRL   91 (223)
T ss_pred             cccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCC
Confidence            4568899999999865  3456777665543   3678999999998776544

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>cd05151 ChoK Choline Kinase (ChoK)

Probab=95.07  E-value=0.053  Score=36.92  Aligned_cols=42  Identities=24%  Similarity=0.230  Sum_probs=28.9

Q ss_pred             hHHHHHHHHHhCCCCCCC-ceeEEEEeCCeEEEEEeccCCCCHHH
Q 043174           97 RVHIEKEILKMLDHPFLP-SLFAEFEASHYSRLVIEYCPGGDLLT  140 (156)
Q Consensus        97 ~~~~E~~~l~~~~h~~iv-~l~~~~~~~~~~~lv~E~~~~g~L~~  140 (156)
                      ....|+.++..+.+.+++ +++...  ...-++||||++|.++..
T Consensus        38 ~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~~   80 (170)
T cd05151          38 NRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELLT   80 (170)
T ss_pred             CHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcccc
Confidence            467899999988654444 445433  334579999999987753

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>cd05119 RIO RIO kinase family, catalytic domain

Probab=94.70  E-value=0.05  Score=37.80  Aligned_cols=14  Identities=29%  Similarity=0.465  Sum_probs=12.2

Q ss_pred             EEEeccCCceEEEe
Q 043174           79 FRRLGSGIIRSVYI   92 (156)
Q Consensus        79 ~~~lG~G~~g~V~~   92 (156)
                      .+.||+|+||.||+
T Consensus         2 ~~~lg~G~~g~Vy~   15 (187)
T cd05119           2 GGPIGTGKEADVYL   15 (187)
T ss_pred             CcccccccceeEEE
Confidence            45789999999999

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=94.08  E-value=0.063  Score=43.04  Aligned_cols=47  Identities=13%  Similarity=0.009  Sum_probs=27.4

Q ss_pred             HHHHHHHHHhC----CCCCCCceeEEEEe-CCeEEEEEeccCCCCHHHHHHh
Q 043174           98 VHIEKEILKML----DHPFLPSLFAEFEA-SHYSRLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus        98 ~~~E~~~l~~~----~h~~iv~l~~~~~~-~~~~~lv~E~~~~g~L~~~l~~  144 (156)
                      +.+|+..+..+    .+.+-+.+..++.+ ...-+++|||++|++|.++...
T Consensus       200 f~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~  251 (437)
T TIGR01982       200 LRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAAL  251 (437)
T ss_pred             HHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHH
Confidence            34455544443    23333444333322 3446899999999999887653

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=94.00  E-value=0.12  Score=43.22  Aligned_cols=59  Identities=27%  Similarity=0.220  Sum_probs=44.5

Q ss_pred             cCCceEEEe------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCHHHHHHh
Q 043174           84 SGIIRSVYI------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus        84 ~G~~g~V~~------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~  144 (156)
                      .|++-.|+.      ...+...+-++-|+.++||||++++..++.++.+|+|+|-+.  .|..++++
T Consensus        36 ~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~  100 (690)
T KOG1243|consen   36 DGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE  100 (690)
T ss_pred             cCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH
Confidence            445555555      123456777788999999999999999999999999999875  45555554

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=93.77  E-value=0.066  Score=37.88  Aligned_cols=63  Identities=21%  Similarity=0.308  Sum_probs=44.3

Q ss_pred             EEEEEeccCCceEEEe----------------chhhhHHHHHHHHHhCCCCCCCc-eeEEEEeCCeEEEEEeccCCCCHH
Q 043174           77 QLFRRLGSGIIRSVYI----------------KKRNRVHIEKEILKMLDHPFLPS-LFAEFEASHYSRLVIEYCPGGDLL  139 (156)
Q Consensus        77 ~~~~~lG~G~~g~V~~----------------~~~~~~~~E~~~l~~~~h~~iv~-l~~~~~~~~~~~lv~E~~~~g~L~  139 (156)
                      ...+.||+|.+|.||+                ..+..+..|+++|..+.--++.. ++.+    +..++.|||+.|-.|.
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~y----g~~~i~me~i~G~~L~  100 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEWRGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFY----GEDFIRMEYIDGRPLG  100 (201)
T ss_pred             hhhhhhhcccccEEEEeeccCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEe----chhhhhhhhhcCcchh
Confidence            3456799999999999                23467899999999887655543 3322    2234569999987776


Q ss_pred             HHHH
Q 043174          140 TVSQ  143 (156)
Q Consensus       140 ~~l~  143 (156)
                      +.-.
T Consensus       101 ~~~~  104 (201)
T COG2112         101 KLEI  104 (201)
T ss_pred             hhhh
Confidence            6543

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=93.42  E-value=0.068  Score=43.30  Aligned_cols=40  Identities=28%  Similarity=0.444  Sum_probs=36.8

Q ss_pred             HHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCHHHHHHh
Q 043174          105 LKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       105 l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~  144 (156)
                      |+.+.|.|+.+++|.+.++..++++.+||..|+|.+.|..
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~   40 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN   40 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc
Confidence            3567899999999999999999999999999999999875

>PRK10593 hypothetical protein; Provisional

Probab=93.35  E-value=0.31  Score=37.01  Aligned_cols=62  Identities=13%  Similarity=0.170  Sum_probs=44.1

Q ss_pred             EEEEEeccCCceEEEe-------------ch---hhhHHHHHHHHHhCCC---CCCCceeEEEEe---CCeEEEEEeccC
Q 043174           77 QLFRRLGSGIIRSVYI-------------KK---RNRVHIEKEILKMLDH---PFLPSLFAEFEA---SHYSRLVIEYCP  134 (156)
Q Consensus        77 ~~~~~lG~G~~g~V~~-------------~~---~~~~~~E~~~l~~~~h---~~iv~l~~~~~~---~~~~~lv~E~~~  134 (156)
                      .-.+.||.|..+.||.             +.   ...+..|...|+.+..   ..+.+.++++.+   .+..++|||+++
T Consensus        17 ~~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~   96 (297)
T PRK10593         17 SRVECISEQPYAALWALYDSQGNPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLR   96 (297)
T ss_pred             heeeecCCccceeEEEEEcCCCCEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccC
Confidence            3355677777777776             21   2478999999998853   356677776654   366899999999


Q ss_pred             CCCH
Q 043174          135 GGDL  138 (156)
Q Consensus       135 ~g~L  138 (156)
                      |+.+
T Consensus        97 G~~~  100 (297)
T PRK10593         97 GVSV  100 (297)
T ss_pred             CEec
Confidence            8765

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=93.08  E-value=0.012  Score=48.86  Aligned_cols=74  Identities=27%  Similarity=0.277  Sum_probs=49.0

Q ss_pred             EEEEEeccCCceEEEe------------chhh--------------hHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           77 QLFRRLGSGIIRSVYI------------KKRN--------------RVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        77 ~~~~~lG~G~~g~V~~------------~~~~--------------~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      .....+|.|++|.|+.            +...              .+..|..+-..+.|+|++.....+.+....+-.|
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m  400 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM  400 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence            3466899999995555            1110              1233444455679999988776666555555559


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |||++ ||+.++...  +.+...
T Consensus       401 E~~~~-Dlf~~~~~~--~~~~~~  420 (601)
T KOG0590|consen  401 EYCPY-DLFSLVMSN--GKLTPL  420 (601)
T ss_pred             hcccH-HHHHHHhcc--cccchh
Confidence            99999 999999874  345433

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=92.70  E-value=0.066  Score=41.03  Aligned_cols=47  Identities=26%  Similarity=0.311  Sum_probs=39.2

Q ss_pred             hhHHHHHHHHHhCCCCCCCceeEEEEeCC------eEEEEEeccCCCCHHHHHH
Q 043174           96 NRVHIEKEILKMLDHPFLPSLFAEFEASH------YSRLVIEYCPGGDLLTVSQ  143 (156)
Q Consensus        96 ~~~~~E~~~l~~~~h~~iv~l~~~~~~~~------~~~lv~E~~~~g~L~~~l~  143 (156)
                      +...+|..++..+.|+||++++.+|....      .+|+|||++. ++|-+.+.
T Consensus        60 kra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~-~nl~~vi~  112 (369)
T KOG0665|consen   60 KRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMD-ANLCQVIL  112 (369)
T ss_pred             hhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhh-hHHHHHHH
Confidence            45788999999999999999999886543      4899999996 58877765

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=92.45  E-value=0.39  Score=34.94  Aligned_cols=58  Identities=17%  Similarity=0.128  Sum_probs=40.7

Q ss_pred             EEeccCCceEEEe--------------chhhhHHHHHHHHHhCCCCC--CCceeEEEEeCCeEEEEEeccCCCC
Q 043174           80 RRLGSGIIRSVYI--------------KKRNRVHIEKEILKMLDHPF--LPSLFAEFEASHYSRLVIEYCPGGD  137 (156)
Q Consensus        80 ~~lG~G~~g~V~~--------------~~~~~~~~E~~~l~~~~h~~--iv~l~~~~~~~~~~~lv~E~~~~g~  137 (156)
                      .+||+|..+.||+              .......+|.+++..+..-.  +.+.+.+..+.+...++||+++|.+
T Consensus         7 ~~i~~G~t~~~y~~~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~   80 (226)
T TIGR02172         7 TQTGEGGNGESYTHKTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR   80 (226)
T ss_pred             eeecCCCCcceeEecCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence            3456666666665              11345788999998875433  4566777777888899999999864

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=92.29  E-value=0.017  Score=48.16  Aligned_cols=70  Identities=23%  Similarity=0.383  Sum_probs=54.6

Q ss_pred             CCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCC-CCCCCceeEEEEeCCeEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLD-HPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~-h~~iv~l~~~~~~~~~~~lv  129 (156)
                      ..|.+.+.||+|+|+.|-.                       ........|..+-..+. |.|++++++.....+..+++
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~   99 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS   99 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence            4466666788888887776                       11223344666666775 99999999999999999999


Q ss_pred             EeccCCCCHHHHHH
Q 043174          130 IEYCPGGDLLTVSQ  143 (156)
Q Consensus       130 ~E~~~~g~L~~~l~  143 (156)
                      +++..||+++..+.
T Consensus       100 ~~~s~g~~~f~~i~  113 (601)
T KOG0590|consen  100 LSYSDGGSLFSKIS  113 (601)
T ss_pred             cCcccccccccccc
Confidence            99999999999883

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=92.23  E-value=0.94  Score=32.45  Aligned_cols=49  Identities=18%  Similarity=0.192  Sum_probs=38.3

Q ss_pred             hhHHHHHHHHHhCC------CCCCCceeEEEEeCCeEEEEEeccCCC------CHHHHHHh
Q 043174           96 NRVHIEKEILKMLD------HPFLPSLFAEFEASHYSRLVIEYCPGG------DLLTVSQR  144 (156)
Q Consensus        96 ~~~~~E~~~l~~~~------h~~iv~l~~~~~~~~~~~lv~E~~~~g------~L~~~l~~  144 (156)
                      ....+|+.....+.      +..|.+++|+.++...+.+|+|.+.+.      +|.+++++
T Consensus        56 ~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~  116 (199)
T PF10707_consen   56 RQNRRELRYYKQLSLRRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKE  116 (199)
T ss_pred             HHHHHHHHHHHHHhhccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHc
Confidence            45667777655554      889999999999999999999986553      48888865

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PLN02876 acyl-CoA dehydrogenase

Probab=91.62  E-value=0.56  Score=40.70  Aligned_cols=42  Identities=21%  Similarity=0.362  Sum_probs=31.9

Q ss_pred             hhHHHHHHHHHhCC-CCCC--CceeEEEEeC---CeEEEEEeccCCCC
Q 043174           96 NRVHIEKEILKMLD-HPFL--PSLFAEFEAS---HYSRLVIEYCPGGD  137 (156)
Q Consensus        96 ~~~~~E~~~l~~~~-h~~i--v~l~~~~~~~---~~~~lv~E~~~~g~  137 (156)
                      ..+.+|..+|..+. |+++  .+.+..+.+.   +..|+||||++|..
T Consensus        83 ~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~  130 (822)
T PLN02876         83 HAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRI  130 (822)
T ss_pred             HHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCCcc
Confidence            35789999999985 6665  6777766654   46789999999754

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=91.17  E-value=0.72  Score=32.94  Aligned_cols=50  Identities=20%  Similarity=0.169  Sum_probs=36.3

Q ss_pred             hhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCHHHHHHhc
Q 043174           96 NRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus        96 ~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ....+|+.++..+.-..|..-.=+..++..-.++|||++|..|.+.|...
T Consensus        44 ~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~   93 (204)
T COG3642          44 ERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA   93 (204)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc
Confidence            35678999999886544443333445677788999999998888888763

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=86.69  E-value=2.7  Score=30.22  Aligned_cols=50  Identities=14%  Similarity=0.137  Sum_probs=36.7

Q ss_pred             hhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCC-CCHHHHHHhc
Q 043174           96 NRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPG-GDLLTVSQRQ  145 (156)
Q Consensus        96 ~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~-g~L~~~l~~~  145 (156)
                      +...+|++.+.+++--.|..-.=++.|...-++.|||++| ..+.++++..
T Consensus        55 ~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~  105 (229)
T KOG3087|consen   55 KRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILST  105 (229)
T ss_pred             HHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHH
Confidence            3567899999887655555545556777778899999987 3788888764

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=85.45  E-value=3.3  Score=29.19  Aligned_cols=62  Identities=29%  Similarity=0.448  Sum_probs=40.8

Q ss_pred             EEEeccCCceEEEe----------------chhhhHHHHHHHHHhCCCC--CCCceeEEE---EeCCeEEEEEeccCCCC
Q 043174           79 FRRLGSGIIRSVYI----------------KKRNRVHIEKEILKMLDHP--FLPSLFAEF---EASHYSRLVIEYCPGGD  137 (156)
Q Consensus        79 ~~~lG~G~~g~V~~----------------~~~~~~~~E~~~l~~~~h~--~iv~l~~~~---~~~~~~~lv~E~~~~g~  137 (156)
                      ++.|+.|..+.||+                .....+..|..++..+...  .+.+++...   ......+++|++++|..
T Consensus         2 i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~   81 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDDGRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRP   81 (239)
T ss_dssp             EEEEEESSSSEEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEE
T ss_pred             CccCCCCCeeeEEEEEECCcEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecccc
Confidence            35677777777777                1235678888888887433  245666533   22446899999999988


Q ss_pred             HHH
Q 043174          138 LLT  140 (156)
Q Consensus       138 L~~  140 (156)
                      +..
T Consensus        82 ~~~   84 (239)
T PF01636_consen   82 LDD   84 (239)
T ss_dssp             HHH
T ss_pred             ccc
Confidence            777

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=85.07  E-value=0.82  Score=37.52  Aligned_cols=74  Identities=19%  Similarity=0.208  Sum_probs=54.4

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe-----------------chh------hhHHHHHHHHHhC-CCCCCCceeEEEEeCC
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI-----------------KKR------NRVHIEKEILKML-DHPFLPSLFAEFEASH  124 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~-----------------~~~------~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~  124 (156)
                      ......+|..+..||.|.|+.|+.                 +..      .....|+.+...+ -|.+++.++..|....
T Consensus       260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r  339 (524)
T KOG0601|consen  260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR  339 (524)
T ss_pred             ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence            345567889999999999988887                 001      1224455555554 5888999888888888


Q ss_pred             eEEEEEeccCCCCHHHHH
Q 043174          125 YSRLVIEYCPGGDLLTVS  142 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l  142 (156)
                      ..|+--|||.++++...+
T Consensus       340 ~~~ip~e~~~~~s~~l~~  357 (524)
T KOG0601|consen  340 QGYIPLEFCEGGSSSLRS  357 (524)
T ss_pred             cccCchhhhcCcchhhhh
Confidence            889999999999866554

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=84.93  E-value=4.6  Score=29.29  Aligned_cols=46  Identities=17%  Similarity=0.157  Sum_probs=33.9

Q ss_pred             hhHHHHHHHHHhCC-CCCCCceeEEEEeCCeEEEEEeccCCCCHHHH
Q 043174           96 NRVHIEKEILKMLD-HPFLPSLFAEFEASHYSRLVIEYCPGGDLLTV  141 (156)
Q Consensus        96 ~~~~~E~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~~~  141 (156)
                      ....+|++++..+. +--+.++++.....+..++|||+++|..|...
T Consensus        36 ~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~   82 (244)
T cd05150          36 YELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL   82 (244)
T ss_pred             cchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence            35788999998873 34455777766666678899999998776543

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=83.76  E-value=1  Score=37.18  Aligned_cols=47  Identities=21%  Similarity=0.135  Sum_probs=36.7

Q ss_pred             HHHHHHHHHhCCCCCCCceeEEEEe----CCeEEEEEeccCCC-CHHHHHHh
Q 043174           98 VHIEKEILKMLDHPFLPSLFAEFEA----SHYSRLVIEYCPGG-DLLTVSQR  144 (156)
Q Consensus        98 ~~~E~~~l~~~~h~~iv~l~~~~~~----~~~~~lv~E~~~~g-~L~~~l~~  144 (156)
                      ...-+++++++.|+|+|.+.++|.+    +..+++|++|.|+- +|+++--.
T Consensus       320 ~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~  371 (655)
T KOG3741|consen  320 DTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFA  371 (655)
T ss_pred             chHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHcc
Confidence            3445788999999999999998874    45699999998764 67776543

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=82.68  E-value=0.24  Score=39.40  Aligned_cols=23  Identities=22%  Similarity=0.473  Sum_probs=20.5

Q ss_pred             CccCCCeEEEEEeccCCceEEEe
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI   92 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~   92 (156)
                      ++.+++|++...||+|--..||.
T Consensus       153 kFtiddyeiG~~igkGC~AaVY~  175 (598)
T KOG4158|consen  153 KFTIDDYEIGEFIGKGCNAAVYS  175 (598)
T ss_pred             ccchhhhcccchhhccchhhhhh
Confidence            46678899999999999999998

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=82.32  E-value=0.5  Score=36.80  Aligned_cols=42  Identities=21%  Similarity=0.250  Sum_probs=34.9

Q ss_pred             HHHhCCCCCCCceeEEEEeCC-----eEEEEEeccCCCCHHHHHHhc
Q 043174          104 ILKMLDHPFLPSLFAEFEASH-----YSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       104 ~l~~~~h~~iv~l~~~~~~~~-----~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      -+..+-|.|||+++.+|.+..     .+.++.||+..|+|.++|++.
T Consensus       120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt  166 (458)
T KOG1266|consen  120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRT  166 (458)
T ss_pred             HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHH
Confidence            345667999999999887643     588999999999999999875

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=81.90  E-value=0.5  Score=38.41  Aligned_cols=51  Identities=25%  Similarity=0.358  Sum_probs=39.5

Q ss_pred             cCCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA  122 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~  122 (156)
                      ..+++.....+|.|+||.|+.                     .......+|+.-+..+.|++|+++...|..
T Consensus        47 ~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~  118 (516)
T KOG1033|consen   47 EANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYE  118 (516)
T ss_pred             hhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceec
Confidence            357788899999999999998                     122345667777778899999999876654

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=81.61  E-value=1.2  Score=36.57  Aligned_cols=70  Identities=21%  Similarity=0.180  Sum_probs=54.2

Q ss_pred             CCeEEEEEecc--CCceEEEe------------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeE
Q 043174           74 DQFQLFRRLGS--GIIRSVYI------------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        74 ~~~~~~~~lG~--G~~g~V~~------------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~  126 (156)
                      ..+.+.+.+|.  |.+|.||.                        .....-.+|......+ .|.|.++.+..|+..+.+
T Consensus       114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l  193 (524)
T KOG0601|consen  114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL  193 (524)
T ss_pred             hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence            33566778999  99999998                        1112335666666677 499999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHh
Q 043174          127 RLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~  144 (156)
                      |+-.|+|. .+|..+...
T Consensus       194 fiqtE~~~-~sl~~~~~~  210 (524)
T KOG0601|consen  194 FIQTELCG-ESLQSYCHT  210 (524)
T ss_pred             eeeecccc-chhHHhhhc
Confidence            99999885 688888765

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=80.73  E-value=0.34  Score=42.73  Aligned_cols=56  Identities=25%  Similarity=0.249  Sum_probs=39.8

Q ss_pred             HHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCCCCHHHHHHhcCCCCCCCCCcC
Q 043174           99 HIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus        99 ~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      ..+-.++-..++|.++.....+....+++++++|+.+|+|...+..-  +..+++-||
T Consensus       852 r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~--~~~saepaR  907 (1205)
T KOG0606|consen  852 RSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNS--GCLSAEPAR  907 (1205)
T ss_pred             CCccCccccCCCCceecccCCCCCCCCcchhhHHhccCCchhhhhcC--CCccccccc
Confidence            33333333445677776665556677899999999999999999885  667666554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	156
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		1e-05
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		2e-05
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		3e-05
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		9e-05
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		9e-05
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		3e-04
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		5e-04
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		6e-04
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		8e-04
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		8e-04
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		9e-04
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		9e-04
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		9e-04

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 21/87 (24%)
Query: 74  DQFQLFRRLGSGIIRSVYI----------------KKRNRVHIEK-----EILKMLDHPF 112
           D F   R+LGSG    V++                K R++V +E+     E+LK LDHP 
Sbjct: 22  DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 113 LPSLFAEFEASHYSRLVIEYCPGGDLL 139
           +  +F  FE  H   +V+E C GG+LL
Sbjct: 82  IIKIFEVFEDYHNMYIVMETCEGGELL 108

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 31/133 (23%)
Query: 44  YFHHTPHKTNQPAKRAMNKLLQQEHGQ----VGLDQFQLFRRLGSGI---IRSVYIKKRN 96
           YF        +  K AMN    +E G+    +GL  F L R +G G    +  V +KK +
Sbjct: 21  YFQGAMGSGIEEEKEAMNT---RESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTD 77
Query: 97  RVH----IEKEIL-----------------KMLDHPFLPSLFAEFEASHYSRLVIEYCPG 135
           R++    ++KE++                 +  +HPFL  L + F+       VIEY  G
Sbjct: 78  RIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 137
Query: 136 GDLLTVSQRQRRL 148
           GDL+   QRQR+L
Sbjct: 138 GDLMFHMQRQRKL 150

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 54/120 (45%), Gaps = 31/120 (25%)
Query: 57  KRAMNKLLQQEHGQ----VGLDQFQLFRRLGSGI---IRSVYIKKRNRVHIEKEILKML- 108
           K AMN    +E G+    +GL  F L R +G G    +  V +KK +R++  K + K L 
Sbjct: 2   KEAMNT---RESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELV 58
Query: 109 --------------------DHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
                               +HPFL  L + F+       VIEY  GGDL+   QRQR+L
Sbjct: 59  NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKL 118

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 71  VGLDQFQLFRRLGSGI---IRSVYIKKRNRVHIEKEILKML------------------- 108
           +GL  F L R +G G    +  V +KK +R++  K + K L                   
Sbjct: 6   LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 109 --DHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
             +HPFL  L + F+       VIEY  GGDL+   QRQR+L
Sbjct: 66  ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKL 107

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 24/102 (23%)
Query: 71  VGLDQFQLFRRLGSGI---IRSVYIKKRNRVHIEKEILKML------------------- 108
           +GL  F L R +G G    +  V +KK +R++  K + K L                   
Sbjct: 2   LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 109 --DHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
             +HPFL  L + F+       VIEY  GGDL+   QRQR+L
Sbjct: 62  ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKL 103

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 81  RLGSGIIRSVYIKKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLL 139
           +L + II++  +K +  V  E  ++  LDH  L  L+  FE+ +   LV+EY  GG+L 
Sbjct: 116 KLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF 174

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 24/117 (20%)
Query: 56  AKRAMNKLLQQEHGQVGLDQFQLFRRLG--------------SGIIRSVYIKKRNRV--- 98
           + +  N +      ++G+D F+  R LG              +G + +V + K++ +   
Sbjct: 5   SSKEGNGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQD 64
Query: 99  ------HIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
                   EK IL +  +HPFL  LF  F+       V+E+  GGDL+   Q+ RR 
Sbjct: 65  DDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRF 121

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 91  YIKKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRF 150
           +++  +R   E EI+K LDHP +  L+  FE +    LV+E C GG+L      +R  R 
Sbjct: 46  FVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRE 105
Query: 151 S 151
           S
Sbjct: 106 S 106

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 91  YIKKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRF 150
           +++  +R   E EI+K LDHP +  L+  FE +    LV+E C GG+L      +R  R 
Sbjct: 63  FVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRE 122
Query: 151 S 151
           S
Sbjct: 123 S 123

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 25/106 (23%)
Query: 73  LDQFQLFRRLGSGII-----------------------RSVYIKKRNRVHIEKEILKMLD 109
           LDQF+  + LG+G                         + V +K+      EK IL+ ++
Sbjct: 41  LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 110 HPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
            PFL  L   F+ +    +V+EY PGG++   S  +R  RFS P A
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMF--SHLRRIGRFSEPHA 144

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 25/106 (23%)
Query: 73  LDQFQLFRRLGSGII-----------------------RSVYIKKRNRVHIEKEILKMLD 109
           LDQF+  + LG+G                         + V +K+      EK IL+ ++
Sbjct: 41  LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 110 HPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
            PFL  L   F+ +    +V+EY PGG++   S  +R  RFS P A
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMF--SHLRRIGRFSEPHA 144

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 101 EKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTV 141
           E++I+   + P++  LF  F+   Y  +V+EY PGGDL+ +
Sbjct: 125 ERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNL 165

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	156
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	1e-12
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-12
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-11
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	1e-11
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	1e-11
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-11
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-11
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	5e-11
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	2e-10
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-10
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	5e-10
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-09
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	1e-09
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-09
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-09
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	6e-09
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	7e-09
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	8e-09
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-08
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-08
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-08
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-08
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-08
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	3e-08
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	4e-08
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	5e-08
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	8e-08
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	8e-08
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-07
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-07
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-07
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-07
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-07
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-07
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-07
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-07
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	4e-07
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	5e-07
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	5e-07
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	5e-07
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	6e-07
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	6e-07
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	7e-07
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	7e-07
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	7e-07
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-06
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-06
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-06
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-06
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-06
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-06
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-06
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	4e-06
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	4e-06
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	5e-06
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	8e-06
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	9e-06
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-05
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-05
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-05
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-05
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-05
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-05
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	4e-05
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	5e-05
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	8e-05
2a19_B	284	Interferon-induced, double-stranded RNA-activated	8e-05
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	8e-05
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-04
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-04
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-04
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-04
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	2e-04
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	5e-04
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	8e-04
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	9e-04

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 63.1 bits (154), Expect = 1e-12
 Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 25/126 (19%)

Query: 53  NQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSG--------------------IIRSVYI 92
            +  +  + K          LDQF   + LG+G                    I+    +
Sbjct: 20  AKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79

Query: 93  KKRNRV-HI--EKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLR 149
            K  ++ H   EK IL+ ++ PFL  L   F+ +    +V+EY  GG++ +  +R    R
Sbjct: 80  VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--R 137

Query: 150 FSIPSA 155
           FS P A
Sbjct: 138 FSEPHA 143

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 62.2 bits (152), Expect = 2e-12
 Identities = 24/131 (18%), Positives = 46/131 (35%), Gaps = 25/131 (19%)

Query: 48  TPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSG--------------------II 87
           T  +    A    +     +  +   + F+  + LG G                    I+
Sbjct: 4   TAAEPRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKIL 63

Query: 88  RSVYIKKRNRV-HI--EKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQR 144
              +I K N+V ++  E++++  LDHPF   L+  F+        + Y   G+LL   ++
Sbjct: 64  EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK 123

Query: 145 QRRLRFSIPSA 155
                F     
Sbjct: 124 IG--SFDETCT 132

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 60.6 bits (147), Expect = 1e-11
 Identities = 27/112 (24%), Positives = 39/112 (34%), Gaps = 23/112 (20%)

Query: 67  EHGQVGLDQFQLFRRLGSG--------------------IIRSVYIKKRNRVH---IEKE 103
           E   V  + F+ +R LG G                     +    IKKR        EK+
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ 236

Query: 104 ILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
           IL+ ++  F+ SL   +E      LV+    GGDL        +  F    A
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARA 288

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 60.1 bits (146), Expect = 1e-11
 Identities = 21/122 (17%), Positives = 47/122 (38%), Gaps = 26/122 (21%)

Query: 57  KRAMNKLLQQEHGQVGLDQFQLFRRLGSG--------------------IIRSVYIKKRN 96
            R  + + +    ++  + +++ + +G G                    ++    + KR+
Sbjct: 52  SRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRS 111

Query: 97  RV-HI--EKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP 153
                  E++I+   + P++  LF  F+   Y  +V+EY PGGDL+ +            
Sbjct: 112 DSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL---MSNYDVPEK 168

Query: 154 SA 155
            A
Sbjct: 169 WA 170

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 59.9 bits (146), Expect = 1e-11
 Identities = 23/109 (21%), Positives = 51/109 (46%), Gaps = 25/109 (22%)

Query: 70  QVGLDQFQLFRRLGSG--------------------IIRSVYIKKRNRV-HI--EKEILK 106
           +  L  FQ+ R LG+G                    +++   + +  +V H   E+ +L 
Sbjct: 2   KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61

Query: 107 MLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
           ++ HPF+  ++  F+ +    ++++Y  GG+L ++ ++ +  RF  P A
Sbjct: 62  IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ--RFPNPVA 108

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 59.9 bits (146), Expect = 1e-11
 Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 27/122 (22%)

Query: 59  AMNKLLQQEHGQVGLDQFQLFRRLGSG-----------------------IIRSVYIKKR 95
           A+   +++ H +    QF+L + LG G                       +++   +K R
Sbjct: 9   AITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR 68

Query: 96  NRVHI--EKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP 153
           +RV    E++IL  ++HPF+  L   F+      L++++  GGDL T  +  + + F+  
Sbjct: 69  DRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFT--RLSKEVMFTEE 126

Query: 154 SA 155
             
Sbjct: 127 DV 128

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 59.4 bits (144), Expect = 2e-11
 Identities = 30/146 (20%), Positives = 55/146 (37%), Gaps = 25/146 (17%)

Query: 33  SSRNERHLISSYFHHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSG------- 85
           +   ++   +     +   ++      M   L +   +V +++F+  + LG G       
Sbjct: 107 ADGLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVIL 166

Query: 86  -------------IIRSVYIKKRNRV-HI--EKEILKMLDHPFLPSLFAEFEASHYSRLV 129
                        I++   I  ++ V H   E  +L+   HPFL +L   F+       V
Sbjct: 167 VKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226

Query: 130 IEYCPGGDLLTVSQRQRRLRFSIPSA 155
           +EY  GG+L     R+R   FS   A
Sbjct: 227 MEYANGGELFFHLSRER--VFSEDRA 250

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 58.5 bits (142), Expect = 5e-11
 Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 25/113 (22%)

Query: 66  QEHGQVGLDQFQLFRRLGSG--------------------IIRSVYIKKRNRV-HI--EK 102
            E+  V  D F++ R +G G                     +      +RN V ++  E 
Sbjct: 7   DENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKEL 66

Query: 103 EILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
           +I++ L+HPFL +L+  F+      +V++   GGDL    Q+     F   + 
Sbjct: 67  QIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNV--HFKEETV 117

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 56.8 bits (138), Expect = 2e-10
 Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 25/109 (22%)

Query: 70  QVGLDQFQLFRRLGSG--------------------IIRSVYIKKRNRV-HI--EKEILK 106
           +V ++ F   + LG G                    I+R   I  ++ V H   E  +L+
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60

Query: 107 MLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
              HPFL +L   F+       V+EY  GG+L     R+R   F+   A
Sbjct: 61  NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER--VFTEERA 107

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 57.0 bits (138), Expect = 2e-10
 Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 24/122 (19%)

Query: 57  KRAMNKLLQQEHGQVGLDQFQLFRRLGSG--------------------IIRSVYIKKRN 96
           + A   +++ +  ++  D F++ + +G G                    I+    + KR 
Sbjct: 44  QWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRG 103

Query: 97  RV-HI--EKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP 153
            V     E+++L   D  ++  L   F+  +Y  LV+EY  GGDLLT+  +    R    
Sbjct: 104 EVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGE-RIPAE 162

Query: 154 SA 155
            A
Sbjct: 163 MA 164

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 55.9 bits (135), Expect = 5e-10
 Identities = 37/177 (20%), Positives = 54/177 (30%), Gaps = 34/177 (19%)

Query: 13  YKPYLISSLSFNSHSSASSCSSRNERHLISSYFHHT-PHKTNQPAKR-----AMNKLLQ- 65
            +P      SF    + +   +     L          H    P +         + LQ 
Sbjct: 115 LEPQAQLFCSFLDAETVARARAGAGDGLFQPLLRAVLAHLGQAPFQEFLDSLYFLRFLQW 174

Query: 66  --QEHGQVGLDQFQLFRRLGSG--------------------IIRSVYIKKRNRVH---I 100
              E   +G D F  FR LG G                     +    +KKR       +
Sbjct: 175 KWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMV 234

Query: 101 EKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLT--VSQRQRRLRFSIPSA 155
           EK+IL  +   F+ SL   FE      LV+    GGD+     +  +    F  P A
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 54.8 bits (132), Expect = 1e-09
 Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 24/114 (21%)

Query: 65  QQEHGQVGLDQFQLFRRLGSG--------------------IIRSVYIKKRNRV-HI--E 101
           + +  ++  + F++ + +G G                    I+    + KR        E
Sbjct: 65  KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREE 124

Query: 102 KEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
           +++L   D  ++ +L   F+  +   LV++Y  GGDLLT+  +    R     A
Sbjct: 125 RDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFED-RLPEEMA 177

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 54.3 bits (131), Expect = 1e-09
 Identities = 35/157 (22%), Positives = 52/157 (33%), Gaps = 44/157 (28%)

Query: 41  ISSYFHHTPHKTNQPAKRAMNKLLQQEHG------------------QVGLDQFQLFRRL 82
           +S Y HH  H  + P    +        G                   +GL  F L R +
Sbjct: 1   MSYYHHHHHHDYDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVI 60

Query: 83  GSG--------------------IIRSVYIKKRNRVH---IEKEIL-KMLDHPFLPSLFA 118
           G G                    +++   +     +     EK +  +  +HPFL  L +
Sbjct: 61  GRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHS 120

Query: 119 EFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
            F+       VIEY  GGDL+   QRQR  +     A
Sbjct: 121 CFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHA 155

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 53.8 bits (130), Expect = 2e-09
 Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 30/128 (23%)

Query: 54  QPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSG--------------------IIRSVYIK 93
           + + +  N +      ++G+D F+  R LG G                    +++   I 
Sbjct: 3   KESSKEGNGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVIL 62

Query: 94  KRNRV-HI--EKEIL-KMLDHPFLPSLFAEF--EASHYSRLVIEYCPGGDLLTVSQRQRR 147
           + + V     EK IL    +HPFL  LF  F      +   V+E+  GGDL+     Q+ 
Sbjct: 63  QDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF--FVMEFVNGGDLMF--HIQKS 118

Query: 148 LRFSIPSA 155
            RF    A
Sbjct: 119 RRFDEARA 126

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 53.8 bits (130), Expect = 2e-09
 Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 26/120 (21%)

Query: 60  MNKLLQQEHGQVGLDQFQLFRRLGSG--------------------IIRSVYIKKRNRV- 98
           +NK       ++ ++ F L + LG G                     ++   +   + V 
Sbjct: 3   LNKERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVE 62

Query: 99  HI--EKEILKM-LDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
               EK +L +  +HPFL  +F  F+       V+EY  GGDL+   Q     +F +  A
Sbjct: 63  CTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH--KFDLSRA 120

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 52.3 bits (126), Expect = 6e-09
 Identities = 30/133 (22%), Positives = 42/133 (31%), Gaps = 18/133 (13%)

Query: 24  NSHSSASSCSSRNERHLISSYFHHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLG 83
           + H  +S      E     S    T       A    +  +   +     D F++   LG
Sbjct: 3   HHHHHSSGVDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELG 62

Query: 84  SGIIRSVY---------------IKKRNRVHI---EKEILKMLDHPFLPSLFAEFEASHY 125
            G    VY               +KK     I   E  +L  L HP +  L   FE    
Sbjct: 63  RGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTE 122

Query: 126 SRLVIEYCPGGDL 138
             LV+E   GG+L
Sbjct: 123 ISLVLELVTGGEL 135

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 52.3 bits (125), Expect = 7e-09
 Identities = 29/153 (18%), Positives = 49/153 (32%), Gaps = 26/153 (16%)

Query: 27  SSASSCSSRNERHLISSYFHHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSG- 85
             +       ++   +     T     + A             ++ L  F     LG G 
Sbjct: 294 EGSEGNEELRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGS 353

Query: 86  -------------------IIRSVYIKKRNRVH---IEKEILKM-LDHPFLPSLFAEFEA 122
                              I++   + + + V    +EK +L +    PFL  L + F+ 
Sbjct: 354 FGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT 413

Query: 123 SHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
                 V+EY  GGDL+     Q+  RF  P A
Sbjct: 414 MDRLYFVMEYVNGGDLMY--HIQQVGRFKEPHA 444

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 52.2 bits (126), Expect = 8e-09
 Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 26/110 (23%)

Query: 70  QVGLDQFQLFRRLGSG--------------------IIRSVYIKKRNRVH---IEKEIL- 105
            +GL  F L R +G G                    +++   +     +     EK +  
Sbjct: 5   PLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 64

Query: 106 KMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
           +  +HPFL  L + F+       VIEY  GGDL+   QRQR  +     A
Sbjct: 65  QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHA 112

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 51.8 bits (125), Expect = 1e-08
 Identities = 27/114 (23%), Positives = 40/114 (35%), Gaps = 26/114 (22%)

Query: 66  QEHGQVGLDQFQLFRRLGSG--------------------IIRSVYIKKRNRV-HI--EK 102
               ++ L  F     LG G                    I++   + + + V     EK
Sbjct: 12  GNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEK 71

Query: 103 EIL-KMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
            +L      PFL  L + F+       V+EY  GGDL+     Q+  RF  P A
Sbjct: 72  RVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMY--HIQQVGRFKEPHA 123

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 51.2 bits (123), Expect = 2e-08
 Identities = 30/123 (24%), Positives = 46/123 (37%), Gaps = 29/123 (23%)

Query: 46  HHTPHKTNQPAKRAMNKLLQQEHGQVGL-------DQFQLFRRLGSGIIRSVY------- 91
           HH  H ++          LQ   G           + +Q  ++LGSG    V        
Sbjct: 2   HHHHHHSSGRENLYFQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVT 61

Query: 92  --------IKKRN-------RVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGG 136
                   I+K +       ++  E  +LK+LDHP +  L+  FE      LV+E   GG
Sbjct: 62  HVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGG 121

Query: 137 DLL 139
           +L 
Sbjct: 122 ELF 124

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 50.6 bits (122), Expect = 2e-08
 Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 29/119 (24%)

Query: 64  LQQEHGQVGLDQFQLFRRLGSG-----------------------IIRSVYI--KKRNRV 98
           + +   ++  + F+L R LG G                       +++   I    ++  
Sbjct: 7   VNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTA 66

Query: 99  HI--EKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
           H   E+ IL+ + HPF+  L   F+      L++EY  GG+L    Q +R   F   +A
Sbjct: 67  HTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFM--QLEREGIFMEDTA 123

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 51.0 bits (122), Expect = 2e-08
 Identities = 18/116 (15%), Positives = 35/116 (30%), Gaps = 28/116 (24%)

Query: 66  QEHGQVGLDQFQLFRRLGSG--------------------IIRSVYIKKRNRVH---IEK 102
           + +  + ++ F + R +G G                     +    IK +        E+
Sbjct: 181 ELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 240

Query: 103 EIL---KMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
            +L      D PF+  +   F        +++   GGDL     +     FS    
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG--VFSEADM 294

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 50.7 bits (122), Expect = 2e-08
 Identities = 30/125 (24%), Positives = 46/125 (36%), Gaps = 26/125 (20%)

Query: 55  PAKRAMNKLLQQEHGQVGLDQFQLFRRLGSG--------------------IIRSVYIKK 94
           PA      L    +       F   + +G G                    +++   I K
Sbjct: 19  PAPSQQINLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILK 78

Query: 95  RNRV-HI--EKEIL-KMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRF 150
           +    HI  E+ +L K + HPFL  L   F+ +     V++Y  GG+L    QR+R   F
Sbjct: 79  KKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRER--CF 136

Query: 151 SIPSA 155
             P A
Sbjct: 137 LEPRA 141

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 50.3 bits (121), Expect = 3e-08
 Identities = 24/105 (22%), Positives = 40/105 (38%), Gaps = 23/105 (21%)

Query: 67  EHGQVGLDQFQLFRRLGSGIIRSVY------------IKKRNRVHI-----------EKE 103
           +  Q  L+ F++ R LG G   +VY            +K   +  +           E E
Sbjct: 2   KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61

Query: 104 ILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
           I   L HP +  L+  F  +    L++EY P G +    Q+  + 
Sbjct: 62  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF 106

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 49.9 bits (120), Expect = 4e-08
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 23/107 (21%)

Query: 65  QQEHGQVGLDQFQLFRRLGSGIIRSVY------------IKKRNRVHI-----------E 101
           +    +  +D F + R LG G   +VY            +K   +  +           E
Sbjct: 5   EMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRRE 64

Query: 102 KEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
            EI   L HP +  ++  F       L++E+ P G+L    Q+  R 
Sbjct: 65  IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF 111

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 49.8 bits (119), Expect = 5e-08
 Identities = 21/106 (19%), Positives = 35/106 (33%), Gaps = 24/106 (22%)

Query: 70  QVGLDQFQLFRRLGSG---------------------IIRSVYIKKRNRVHIEKEILKML 108
                 + L   LG G                          +++  +    E E+LK L
Sbjct: 5   STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL 64

Query: 109 DHPFLPSLFAEFEASHYSR--LVIEYCPGGDLLT-VSQRQRRLRFS 151
           +H  +  LFA  E +      L++E+CP G L T + +        
Sbjct: 65  NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLP 110

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 49.2 bits (118), Expect = 8e-08
 Identities = 17/88 (19%), Positives = 30/88 (34%), Gaps = 22/88 (25%)

Query: 74  DQFQLFRRLGSGIIRSVY---------------IKKRNRVHIEKE-------ILKMLDHP 111
           +++QLF  LG G    V                I  +     + +       I ++L HP
Sbjct: 11  EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHP 70

Query: 112 FLPSLFAEFEASHYSRLVIEYCPGGDLL 139
            +  L        +  L+ +   GG+L 
Sbjct: 71  NIVRLHDSISEEGHHYLIFDLVTGGELF 98

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 49.1 bits (117), Expect = 8e-08
 Identities = 21/106 (19%), Positives = 35/106 (33%), Gaps = 24/106 (22%)

Query: 70  QVGLDQFQLFRRLGSG---------------------IIRSVYIKKRNRVHIEKEILKML 108
                 + L   LG G                          +++  +    E E+LK L
Sbjct: 5   STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL 64

Query: 109 DHPFLPSLFAEFEASHYSR--LVIEYCPGGDLLT-VSQRQRRLRFS 151
           +H  +  LFA  E +      L++E+CP G L T + +        
Sbjct: 65  NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLP 110

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 48.9 bits (117), Expect = 1e-07
 Identities = 20/115 (17%), Positives = 36/115 (31%), Gaps = 26/115 (22%)

Query: 49  PHKTNQPAKRAMNK---LLQQEHGQVGLDQFQLFRRLGSGIIRSVY-------------- 91
           PH  +    + M +    +     +   D + +   LG G    V               
Sbjct: 2   PHMASMTGGQQMGRGSEFMMNASTKFS-DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAK 60

Query: 92  -IKKRN-------RVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDL 138
            I  +        ++  E  I + L HP +  L    +   +  LV +   GG+L
Sbjct: 61  IINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 115

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 48.8 bits (117), Expect = 1e-07
 Identities = 29/163 (17%), Positives = 58/163 (35%), Gaps = 30/163 (18%)

Query: 21  LSFNSHSSASSCSSRNERHLISSYFHHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFR 80
           ++ + H       S       S+       +            L     +VG++ F+L +
Sbjct: 1   MAHHHHHHEEEGGSSGGAAGTSADGGDGGEQLLTVKHELRTANLTGHAEKVGIENFELLK 60

Query: 81  RLGSG-----------------------IIRSVYI--KKRNRVHI--EKEILKMLDH-PF 112
            LG+G                       +++   I  K +   H   E+++L+ +   PF
Sbjct: 61  VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120

Query: 113 LPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
           L +L   F+      L+++Y  GG+L T   ++   RF+    
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGELFTHLSQRE--RFTEHEV 161

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 48.9 bits (117), Expect = 1e-07
 Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 23/89 (25%)

Query: 74  DQFQLFRRLGSGIIRSVY---------------IKKRN--------RVHIEKEILKMLDH 110
           D+++  R LG G    V                I KR          +  E ++LK LDH
Sbjct: 26  DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85

Query: 111 PFLPSLFAEFEASHYSRLVIEYCPGGDLL 139
           P +  L+  FE   Y  LV E   GG+L 
Sbjct: 86  PNIMKLYEFFEDKGYFYLVGEVYTGGELF 114

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 48.5 bits (116), Expect = 1e-07
 Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 22/117 (18%)

Query: 57  KRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVY------------IKK---------- 94
             +   L  +      ++++   +++G G                  IK+          
Sbjct: 7   HSSGVDLGTENLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKE 66

Query: 95  RNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFS 151
           R     E  +L  + HP +      FE +    +V++YC GGDL      Q+ + F 
Sbjct: 67  REESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQ 123

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 48.5 bits (116), Expect = 1e-07
 Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 22/88 (25%)

Query: 74  DQFQLFRRLGSGIIRSVY---------------IKKRN-------RVHIEKEILKMLDHP 111
           +++ +   LG G    V                I K +        +  E E+LK LDHP
Sbjct: 22  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81

Query: 112 FLPSLFAEFEASHYSRLVIEYCPGGDLL 139
            +  LF   E S    +V E   GG+L 
Sbjct: 82  NIMKLFEILEDSSSFYIVGELYTGGELF 109

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 47.9 bits (114), Expect = 3e-07
 Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 20/86 (23%)

Query: 74  DQFQLFRRLGSGIIRSVY---------------IKKRNRVHIEK-----EILKMLDHPFL 113
           D + +   LG+G    V+               +   +    E      + + +L HP L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216

Query: 114 PSLFAEFEASHYSRLVIEYCPGGDLL 139
            +L   FE  +   ++ E+  GG+L 
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELF 242

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 47.3 bits (113), Expect = 3e-07
 Identities = 31/135 (22%), Positives = 52/135 (38%), Gaps = 28/135 (20%)

Query: 42  SSYFHHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVY---------- 91
           S      P    QP K      L+ + G   L  F++ +++G G    VY          
Sbjct: 5   SQGMQGPPVPQFQPQKA-----LRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVP 59

Query: 92  --IKK-----------RNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDL 138
             +KK           R     E ++LK L+HP +   +A F   +   +V+E    GDL
Sbjct: 60  VALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDL 119

Query: 139 LTVSQRQRRLRFSIP 153
             + +  ++ +  IP
Sbjct: 120 SRMIKHFKKQKRLIP 134

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 17/87 (19%), Positives = 28/87 (32%), Gaps = 22/87 (25%)

Query: 74  DQFQLFRRLGSGIIRSVY---------------IKKR-------NRVHIEKEILKMLDHP 111
           D + +   LG G    V                I  +        ++  E  I + L HP
Sbjct: 6   DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65

Query: 112 FLPSLFAEFEASHYSRLVIEYCPGGDL 138
            +  L    +   +  LV +   GG+L
Sbjct: 66  NIVRLHDSIQEESFHYLVFDLVTGGEL 92

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 47.0 bits (112), Expect = 4e-07
 Identities = 20/85 (23%), Positives = 31/85 (36%), Gaps = 20/85 (23%)

Query: 74  DQFQLFRRLGSGIIRSVY---------------IKKRNRVHIEK-----EILKMLDHPFL 113
           D + +   LGSG    V+               I     +          I+  L HP L
Sbjct: 51  DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 110

Query: 114 PSLFAEFEASHYSRLVIEYCPGGDL 138
            +L   FE  +   L++E+  GG+L
Sbjct: 111 INLHDAFEDKYEMVLILEFLSGGEL 135

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 47.0 bits (112), Expect = 5e-07
 Identities = 19/53 (35%), Positives = 30/53 (56%)

Query: 86  IIRSVYIKKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDL 138
           II++  +K +  V  E  ++  LDH  L  L+  FE+ +   LV+EY  GG+L
Sbjct: 121 IIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 46.8 bits (112), Expect = 5e-07
 Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 20/85 (23%)

Query: 74  DQFQLFRRLGSGIIRSVY---------------IKKRNRVHIEK-----EILKMLDHPFL 113
             F     LGSG    V+               IKK              +LK + H  +
Sbjct: 9   KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENI 68

Query: 114 PSLFAEFEASHYSRLVIEYCPGGDL 138
            +L   +E++ +  LV++   GG+L
Sbjct: 69  VTLEDIYESTTHYYLVMQLVSGGEL 93

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 46.8 bits (112), Expect = 5e-07
 Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 20/86 (23%)

Query: 74  DQFQLFRRLGSGIIRSVY---------------IKKRNRVHIEK-----EILKMLDHPFL 113
             + L   +G G    V                I K     +++     EI+K LDHP +
Sbjct: 9   QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI 68

Query: 114 PSLFAEFEASHYSRLVIEYCPGGDLL 139
             L+  FE +    LV+E C GG+L 
Sbjct: 69  IRLYETFEDNTDIYLVMELCTGGELF 94

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 46.5 bits (111), Expect = 6e-07
 Identities = 17/91 (18%), Positives = 27/91 (29%), Gaps = 25/91 (27%)

Query: 74  DQFQLFRRLGSGIIRSVY---------------IKKRN----------RVHIEKEILKML 108
           D ++L   +G G    V                +               +  E  I  ML
Sbjct: 24  DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83

Query: 109 DHPFLPSLFAEFEASHYSRLVIEYCPGGDLL 139
            HP +  L   + +     +V E+  G DL 
Sbjct: 84  KHPHIVELLETYSSDGMLYMVFEFMDGADLC 114

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 46.5 bits (111), Expect = 6e-07
 Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 22/88 (25%)

Query: 74  DQFQLFRRLGSGIIRSVY---------------IKKR-------NRVHIEKEILKMLDHP 111
           +++ +   LG G    V                I K        + +  E E+LK LDHP
Sbjct: 22  ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81

Query: 112 FLPSLFAEFEASHYSRLVIEYCPGGDLL 139
            +  LF   E S    +V E   GG+L 
Sbjct: 82  NIMKLFEILEDSSSFYIVGELYTGGELF 109

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 46.4 bits (110), Expect = 7e-07
 Identities = 22/91 (24%), Positives = 33/91 (36%), Gaps = 25/91 (27%)

Query: 74  DQFQLFRRLGSGIIRSVY---------------IKKRN----------RVHIEKEILKML 108
            ++ L   +G G    V                + K            R+  E  ++K L
Sbjct: 26  KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL 85

Query: 109 DHPFLPSLFAEFEASHYSRLVIEYCPGGDLL 139
            HP +  L+  +E   Y  LV+E C GG LL
Sbjct: 86  HHPNIARLYEVYEDEQYICLVMELCHGGHLL 116

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 46.6 bits (111), Expect = 7e-07
 Identities = 31/133 (23%), Positives = 43/133 (32%), Gaps = 39/133 (29%)

Query: 46  HHTPHKTNQPAKRAMNKLLQQEHGQVGL------DQFQLFRRLGSGIIRSVY-------- 91
           HH  H ++         +       V        + +   R+LGSG    V         
Sbjct: 2   HHHHHHSSGRENLYFQGIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGH 61

Query: 92  -------IKKRN------------------RVHIEKEILKMLDHPFLPSLFAEFEASHYS 126
                  IKK                     ++ E  +LK LDHP +  LF  FE   Y 
Sbjct: 62  SEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYF 121

Query: 127 RLVIEYCPGGDLL 139
            LV E+  GG+L 
Sbjct: 122 YLVTEFYEGGELF 134

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 46.1 bits (110), Expect = 7e-07
 Identities = 33/101 (32%), Positives = 44/101 (43%), Gaps = 23/101 (22%)

Query: 74  DQFQLFRRLGSGIIRSVY---------------IKKR------NRVHIEKEILKMLDHPF 112
           D F   R+LGSG    V+               I K        ++  E E+LK LDHP 
Sbjct: 22  DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81

Query: 113 LPSLFAEFEASHYSRLVIEYCPGGDLL--TVSQRQRRLRFS 151
           +  +F  FE  H   +V+E C GG+LL   VS + R    S
Sbjct: 82  IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALS 122

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 45.7 bits (109), Expect = 1e-06
 Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 24/105 (22%)

Query: 73  LDQFQLFRRLGSGIIRSVY------------IKK----------RNRVHIEKEILKMLDH 110
            + +++   +G+G                   K+          +  +  E  +L+ L H
Sbjct: 5   AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64

Query: 111 PFLPSLFAEFEASHYSRLVI--EYCPGGDLLTVSQRQRRLRFSIP 153
           P +   +        + L I  EYC GGDL +V  +  + R  + 
Sbjct: 65  PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD 109

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 45.5 bits (108), Expect = 2e-06
 Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 29/94 (30%)

Query: 74  DQFQLFRRLGSGIIRSVY---------------IKKR-------------NRVHIEKEIL 105
           D++ + + LGSG    V                I KR               V  E EIL
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194

Query: 106 KMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLL 139
           K L+HP +  +   F+A  Y  +V+E   GG+L 
Sbjct: 195 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELF 227

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 26/91 (28%)

Query: 74  DQFQLFRRLGSGIIRSVY---------------IKKRN-----------RVHIEKEILKM 107
           D + +   LGSG    V                IKKR             +  E  IL+ 
Sbjct: 12  DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71

Query: 108 LDHPFLPSLFAEFEASHYSRLVIEYCPGGDL 138
           + H  + +L   +E      L++E   GG+L
Sbjct: 72  VLHHNVITLHDVYENRTDVVLILELVSGGEL 102

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 45.0 bits (107), Expect = 2e-06
 Identities = 22/91 (24%), Positives = 33/91 (36%), Gaps = 26/91 (28%)

Query: 74  DQFQLFRRLGSGIIRSVY---------------IKKRN-----------RVHIEKEILKM 107
           D + +   LGSG    V                IKKR             +  E  IL+ 
Sbjct: 12  DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ 71

Query: 108 LDHPFLPSLFAEFEASHYSRLVIEYCPGGDL 138
           + HP + +L   +E      L++E   GG+L
Sbjct: 72  VLHPNIITLHDVYENRTDVVLILELVSGGEL 102

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 45.0 bits (106), Expect = 2e-06
 Identities = 16/141 (11%), Positives = 32/141 (22%), Gaps = 25/141 (17%)

Query: 32  CSSRNERHLISSYFHHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSG------ 85
                 + L       + +      +  +  +  +   Q+G     +   LG G      
Sbjct: 23  DDKLIFKLLSGLSKPVSSYPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVY 82

Query: 86  -------------------IIRSVYIKKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS 126
                              + +     +        E LK          ++     + S
Sbjct: 83  EATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGS 142

Query: 127 RLVIEYCPGGDLLTVSQRQRR 147
            LV E    G LL      + 
Sbjct: 143 VLVGELYSYGTLLNAINLYKN 163

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 19/85 (22%)

Query: 74  DQFQLFRRLGSGIIRSVY---------------IKKRNR----VHIEKEILKMLDHPFLP 114
           +++ +   LG G    V+               +K +      V  E  IL +  H  + 
Sbjct: 5   EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64

Query: 115 SLFAEFEASHYSRLVIEYCPGGDLL 139
            L   FE+     ++ E+  G D+ 
Sbjct: 65  HLHESFESMEELVMIFEFISGLDIF 89

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 44.5 bits (106), Expect = 3e-06
 Identities = 22/91 (24%), Positives = 33/91 (36%), Gaps = 26/91 (28%)

Query: 74  DQFQLFRRLGSGIIRSVY---------------IKKRNRVHIEK-----------EILKM 107
           D +++   LGSG    V                IKKR      +            IL+ 
Sbjct: 5   DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64

Query: 108 LDHPFLPSLFAEFEASHYSRLVIEYCPGGDL 138
           + HP + +L   FE      L++E   GG+L
Sbjct: 65  IRHPNIITLHDIFENKTDVVLILELVSGGEL 95

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 44.7 bits (105), Expect = 4e-06
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 27/93 (29%)

Query: 73  LDQFQLFRRLGSG---------------------IIRSVYIKKRNRVHIEKEILKMLDHP 111
              +++  RLG+G                       + +  K R R  +E +I+K L+HP
Sbjct: 13  CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 72

Query: 112 FLPSLFAEFE------ASHYSRLVIEYCPGGDL 138
            + S     +       +    L +EYC GGDL
Sbjct: 73  NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDL 105

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 44.2 bits (105), Expect = 4e-06
 Identities = 23/91 (25%), Positives = 32/91 (35%), Gaps = 26/91 (28%)

Query: 74  DQFQLFRRLGSGIIRSVY---------------IKKRN-----------RVHIEKEILKM 107
           D +     LGSG    V                IKKR             +  E  ILK 
Sbjct: 11  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 70

Query: 108 LDHPFLPSLFAEFEASHYSRLVIEYCPGGDL 138
           + HP + +L   +E      L++E   GG+L
Sbjct: 71  IQHPNVITLHEVYENKTDVILILELVAGGEL 101

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 43.8 bits (104), Expect = 5e-06
 Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 29/93 (31%)

Query: 74  DQFQLFRRLGSGIIRSVY---------------IKKR-------------NRVHIEKEIL 105
           D++ + + LGSG    V                I KR               V  E EIL
Sbjct: 10  DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69

Query: 106 KMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDL 138
           K L+HP +  +   F+A  Y  +V+E   GG+L
Sbjct: 70  KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGEL 101

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 43.6 bits (103), Expect = 8e-06
 Identities = 23/146 (15%), Positives = 48/146 (32%), Gaps = 22/146 (15%)

Query: 27  SSASSCSSRNERHLISSYFHHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRR-LGSG 85
            + +         L        P    Q  +  +   LQ +   + +D +++  + LG G
Sbjct: 15  PAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAI-IDDYKVTSQVLGLG 73

Query: 86  IIRSVY---------------IKKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSR-- 127
           I   V                ++   +   E E+       P +  +   +E  +  R  
Sbjct: 74  INGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 133

Query: 128 --LVIEYCPGGDLLTVSQRQRRLRFS 151
             +V+E   GG+L +  Q +    F+
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQAFT 159

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 43.1 bits (102), Expect = 9e-06
 Identities = 19/137 (13%), Positives = 44/137 (32%), Gaps = 29/137 (21%)

Query: 41  ISSYFHHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVY--------- 91
           + S  HH  H + +        ++      +    +   ++LG G    V          
Sbjct: 1   MGSSHHHHHHSSGRENLYFQGHMVI-----IDNKHYLFIQKLGEGGFSYVDLVEGLHDGH 55

Query: 92  ---IKK--------RNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR----LVIEYCPGG 136
              +K+        R     E ++ ++ +HP +  L A       ++    L++ +   G
Sbjct: 56  FYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRG 115

Query: 137 DLLTVSQRQRRLRFSIP 153
            L    +R +     + 
Sbjct: 116 TLWNEIERLKDKGNFLT 132

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 18/107 (16%), Positives = 31/107 (28%), Gaps = 32/107 (29%)

Query: 73  LDQFQLFRRLGSGIIRSVY------------IK-------KRNRVHIEKEILKMLDHPFL 113
              F+    LG G    V             IK       K + +  E  +L  L+H ++
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64

Query: 114 PSLFAEFEASHYSR-------------LVIEYCPGGDLLTVSQRQRR 147
              +A +                    + +EYC  G L  +   +  
Sbjct: 65  VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENL 111

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 92  IKKRNRVHIEKE--ILKMLD-HPFLPSLFAEFEASHYSRLVIEYCPGGDLL 139
           I KR   + +KE   LK+ + HP +  L   F    ++ LV+E   GG+L 
Sbjct: 44  ISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELF 94

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 21/127 (16%), Positives = 45/127 (35%), Gaps = 24/127 (18%)

Query: 46  HHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRR-LGSGIIRSVY------------- 91
           HH  H  +      + +  + +   V  D +QL ++ LG G+   V              
Sbjct: 3   HHHHH--HSSGLEVLFQGPEPKKYAV-TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCAL 59

Query: 92  --IKKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSR----LVIEYCPGGDLLTVSQR 144
             +    +   E +        P +  +   +E  H+ +    +++E   GG+L +  Q 
Sbjct: 60  KLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQE 119

Query: 145 QRRLRFS 151
           +    F+
Sbjct: 120 RGDQAFT 126

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 23/117 (19%), Positives = 40/117 (34%), Gaps = 26/117 (22%)

Query: 46  HHTPHKTNQPAKRAMNKLLQQEHGQVGLDQFQLFRR-LGSGIIRSVY------------- 91
           HH  H  +         L  Q       + + L  + LG G    V              
Sbjct: 2   HHHHHH-SSGVDLGTENLYFQSMENFN-NFYILTSKELGRGKFAVVRQCISKSTGQEYAA 59

Query: 92  --IKKRNRVHIEKE-------ILKMLDH-PFLPSLFAEFEASHYSRLVIEYCPGGDL 138
             +KKR R    +        +L++    P + +L   +E +    L++EY  GG++
Sbjct: 60  KFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEI 116

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 20/104 (19%), Positives = 35/104 (33%), Gaps = 18/104 (17%)

Query: 53  NQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVYI----------------KKRN 96
                 ++ + L +   Q   D +++   +G G                       K + 
Sbjct: 2   QTVGVHSIVQQLHRNSIQF-TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR 60

Query: 97  RVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPGGDLL 139
               E EIL     HP + +L   ++   Y  +V E   GG+LL
Sbjct: 61  DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELL 104

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 6/49 (12%), Positives = 16/49 (32%)

Query: 101 EKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLR 149
           E +I+  + + +  +            ++ EY     +L   +    L 
Sbjct: 93  ELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLD 141

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 41.5 bits (98), Expect = 4e-05
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 86  IIRSVYIKKRNRVHIEKEI--LKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQ 143
           II    +   +   + +E+  +K+L+HP +  LF   E      L++EY  GG++     
Sbjct: 47  IIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV 106

Query: 144 RQRRLR 149
              R++
Sbjct: 107 AHGRMK 112

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 40.7 bits (96), Expect = 5e-05
 Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 80  RRLGSGIIRSVYIKKRNRVHIEKEILKMLD-HPFLPSLFAEFEASHYSRLVIEYCPGGDL 138
              G         + R     E +IL+ +  HP +  L   +E + +  LV +    G+L
Sbjct: 52  VTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL 111

Query: 139 L 139
            
Sbjct: 112 F 112

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 40.3 bits (95), Expect = 8e-05
 Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 86  IIRSVYIKKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPGGDLL 139
           II       R+RV  E E+L     H  +  L   FE      LV E   GG +L
Sbjct: 45  IIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSIL 99

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 40.4 bits (95), Expect = 8e-05
 Identities = 18/111 (16%), Positives = 34/111 (30%), Gaps = 32/111 (28%)

Query: 73  LDQFQLFRRLGSGIIRSVY------------IKK----RNRVHIEKEILKMLDHPFLPSL 116
              F+    +GSG    V+            IK+      +   E + L  LDH  +   
Sbjct: 10  GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHY 69

Query: 117 FAEFEASHYSR----------------LVIEYCPGGDLLTVSQRQRRLRFS 151
              ++   Y                  + +E+C  G L    +++R  +  
Sbjct: 70  NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 120

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 40.5 bits (95), Expect = 8e-05
 Identities = 24/149 (16%), Positives = 45/149 (30%), Gaps = 23/149 (15%)

Query: 20  SLSFNSHSSASSCSSRNERHLISSYFHHTPHKTNQPAKRAMNKLLQQEHGQVG--LDQFQ 77
           S S +S  + S  S        S+       +T       + + L+    +    +    
Sbjct: 2   SGSVSSGQAHSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMT 61

Query: 78  LFRRLGSGIIRSVY------------IKKRNRVHIEK------EILKMLDHPFLPSLFAE 119
              R+G G    V+            +KK   V +E            L  P +  L+  
Sbjct: 62  HQPRVGRGSFGEVHRMKDKQTGFQCAVKK---VRLEVFRVEELVACAGLSSPRIVPLYGA 118

Query: 120 FEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
                +  + +E   GG L  + ++   L
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLIKQMGCL 147

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 86  IIRSVYIKKRNRVHIEKEI--LKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQ 143
           + +S+ +K   R  +  EI   + L H  +      FE + +  +V+E C    LL + +
Sbjct: 74  VPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK 133

Query: 144 RQRRL 148
           R++ L
Sbjct: 134 RRKAL 138

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 19/101 (18%), Positives = 26/101 (25%), Gaps = 24/101 (23%)

Query: 71  VGLDQFQLFRRLGSG--------------------IIRSVYIKKRNRVHIEKEI---LKM 107
                FQ   RLG G                       S +   ++R     E+    K+
Sbjct: 54  FFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKV 113

Query: 108 LDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
             HP    L   +E      L  E C G  L    +     
Sbjct: 114 GQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGAS 153

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 93  KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPGGDLL 139
           + R     E  IL+ +  HP + +L   +E+S +  LV +    G+L 
Sbjct: 141 EVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELF 188

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 14/54 (25%), Positives = 27/54 (50%)

Query: 95  RNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
           R ++ +E  I + L H  +      FE + +  +V+E C    LL + +R++ L
Sbjct: 59  REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKAL 112

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 18/100 (18%), Positives = 38/100 (38%), Gaps = 21/100 (21%)

Query: 73  LDQFQLFRR-LGSGIIRSVY---------------IKKRNRVHIEKEIL-KMLDHPFLPS 115
           +D +++  + LG GI   V                ++   +   E E+  +    P +  
Sbjct: 16  IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 75

Query: 116 LFAEFEASHYSR----LVIEYCPGGDLLTVSQRQRRLRFS 151
           +   +E  +  R    +V+E   GG+L +  Q +    F+
Sbjct: 76  IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFT 115

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 38.1 bits (89), Expect = 5e-04
 Identities = 26/112 (23%), Positives = 40/112 (35%), Gaps = 26/112 (23%)

Query: 59  AMNKLLQQEHGQVGLD---QFQLFRRLGSGIIRSVY------------IKKRNRVH---- 99
           +M K  + EH +  LD    +++   LG G    VY             K          
Sbjct: 1   SMRKSREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL 60

Query: 100 --IEKEI--LKMLDHPFLPSLFAEFEASHYSRLVIEYCPGG---DLLTVSQR 144
                EI  L   DHP++  L   +       ++IE+CPGG    ++    R
Sbjct: 61  EDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDR 112

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 37.3 bits (87), Expect = 8e-04
 Identities = 23/115 (20%), Positives = 43/115 (37%), Gaps = 21/115 (18%)

Query: 51  KTNQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVYIKKRNRVH----------- 99
           +   P +R + KL +    +   + F +  +LG G   SVY                   
Sbjct: 6   QLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE 65

Query: 100 -----IEKEI--LKMLDHPFLPSLFAEFEASHYSRLVIEYCPGG---DLLTVSQR 144
                I KEI  ++  D P +   +  +  +    +V+EYC  G   D++ +  +
Sbjct: 66  SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNK 120

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 37.5 bits (87), Expect = 9e-04
 Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 22/119 (18%)

Query: 52  TNQPAKRAMNKLLQQEH-GQVGLDQFQLFRRLGSGIIRSVY------------IK----- 93
             Q  KR    L Q++  G++  D F+    LG+G    V+             K     
Sbjct: 10  DEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE 69

Query: 94  ----KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
                RN++  E ++L   + P++   +  F +     + +E+  GG L  V ++  R+
Sbjct: 70  IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI 128

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	156
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.83
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.81
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.77
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.77
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.76
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.74
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.74
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.74
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.73
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.73
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.72
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.72
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.69
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.69
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.68
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.64
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.62
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.59
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.59
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.57
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.57
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.56
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.56
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.55
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.55
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.55
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.55
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.54
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.54
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.54
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.53
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.53
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.53
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.52
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.51
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.51
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.51
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.5
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.5
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.49
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.49
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.49
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.48
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.48
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.48
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.48
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.47
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.47
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.47
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.47
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.46
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.46
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.46
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.46
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.45
3uqc_A	286	Probable conserved transmembrane protein; structur	99.45
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.45
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.45
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.45
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.45
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.45
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.45
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.45
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.44
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.44
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.44
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.44
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.44
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.44
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.44
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.44
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.44
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.44
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.43
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.43
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.43
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.42
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.42
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.42
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.42
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.41
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.41
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.4
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.4
3bhy_A	283	Death-associated protein kinase 3; death associate	99.4
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.4
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.4
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.4
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.4
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.4
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.39
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.39
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.39
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.39
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.39
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.39
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.39
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.39
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.38
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.38
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.38
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.38
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.38
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.38
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.38
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.38
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.38
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.38
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.38
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.38
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.37
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.37
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.37
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.37
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.37
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.37
3niz_A	311	Rhodanese family protein; structural genomics, str	99.36
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.36
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.36
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.36
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.36
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.36
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.36
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.36
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.36
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.36
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.35
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.35
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.35
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.35
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.35
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.35
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.35
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.34
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.34
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.34
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.34
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.34
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.33
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.33
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.33
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.33
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.33
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.33
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.32
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.32
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.32
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.32
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.32
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.32
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.32
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.32
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.32
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.32
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.32
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.32
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.31
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.31
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.31
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.31
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.31
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.31
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.3
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.3
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.3
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.3
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.3
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.3
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.29
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.29
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.28
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.28
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.28
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.28
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.28
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.28
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.27
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.27
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.27
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.26
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.26
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.26
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.26
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.26
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.25
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.25
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.25
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.25
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.24
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.24
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.23
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.23
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.22
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.22
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.22
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.22
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.22
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.21
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.21
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.2
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.2
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.19
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.19
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.19
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.18
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.18
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.18
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.18
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.18
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.17
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.16
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.16
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.16
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.16
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.16
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.15
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.15
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.15
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.15
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.13
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.12
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.12
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.11
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.11
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.11
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.11
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.11
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.11
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.1
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.1
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.09
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.08
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.07
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.07
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.04
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.04
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.03
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.02
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.02
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.01
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.99
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	98.99
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	98.97
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.96
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	98.96
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.94
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.94
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	98.93
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.93
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.92
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.39
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.44
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	97.44
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.35
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.29
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.45
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	95.33
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	94.79
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	93.29
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	91.13
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	91.01
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	88.39
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	88.24
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	86.32

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.83  E-value=5.6e-21  Score=143.76  Aligned_cols=84  Identities=24%  Similarity=0.434  Sum_probs=75.6

Q ss_pred             CccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      +...++|++++.||+|+||.||+                       ...+.+.+|+.+|+.++|||||+++++|++++.+
T Consensus        28 ~~~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~  107 (311)
T 4aw0_A           28 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL  107 (311)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             CCCccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE
Confidence            44567899999999999999999                       1235689999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |+|||||+||+|+++|++.  +.++|++|
T Consensus       108 yivmEy~~gG~L~~~i~~~--~~l~e~~~  134 (311)
T 4aw0_A          108 YFGLSYAKNGELLKYIRKI--GSFDETCT  134 (311)
T ss_dssp             EEEECCCTTEEHHHHHHHH--SSCCHHHH
T ss_pred             EEEEecCCCCCHHHHHHHc--CCCCHHHH
Confidence            9999999999999999986  78998765

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.81  E-value=3.7e-20  Score=141.31  Aligned_cols=84  Identities=23%  Similarity=0.476  Sum_probs=67.9

Q ss_pred             cCCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      .+++|++++.||+|+||.||+                      +..+.+.+|+.+|+.++|||||++++++++++.+|||
T Consensus        22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV  101 (350)
T 4b9d_A           22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV  101 (350)
T ss_dssp             CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence            368899999999999999999                      2345689999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      ||||+||+|+++|..+....++|.++
T Consensus       102 mEy~~gg~L~~~i~~~~~~~~~e~~~  127 (350)
T 4b9d_A          102 MDYCEGGDLFKRINAQKGVLFQEDQI  127 (350)
T ss_dssp             EECCTTCBHHHHHHHTTTCCCCHHHH
T ss_pred             EeCCCCCcHHHHHHHcCCCCCCHHHH
Confidence            99999999999998764455676543

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.77  E-value=1.2e-18  Score=135.91  Aligned_cols=80  Identities=19%  Similarity=0.325  Sum_probs=72.2

Q ss_pred             CCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           73 LDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      .+.|++++.||+|+||.||+                    ...+.+.+|+.+|+.++|||||+++++|.+.+.+||||||
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy  229 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  229 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence            46799999999999999999                    2345689999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCCCc
Q 043174          133 CPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |+||+|.++++.   +.++|+++
T Consensus       230 ~~gG~L~~~i~~---~~l~e~~~  249 (423)
T 4fie_A          230 LEGGALTDIVTH---TRMNEEQI  249 (423)
T ss_dssp             CTTEEHHHHHHH---SCCCHHHH
T ss_pred             CCCCcHHHHHhc---cCCCHHHH
Confidence            999999999986   56887654

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.77  E-value=5.3e-19  Score=134.76  Aligned_cols=80  Identities=19%  Similarity=0.325  Sum_probs=72.0

Q ss_pred             CCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           73 LDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      .+.|++.+.||+|+||.||+                    ...+.+.+|+.+|+.++|||||+++++|.+++.+||||||
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  152 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  152 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence            46799999999999999999                    2345689999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCCCc
Q 043174          133 CPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |+||+|.+++++   +.++|+++
T Consensus       153 ~~gg~L~~~l~~---~~l~e~~~  172 (346)
T 4fih_A          153 LEGGALTDIVTH---TRMNEEQI  172 (346)
T ss_dssp             CTTEEHHHHHHH---SCCCHHHH
T ss_pred             CCCCcHHHHHHc---CCCCHHHH
Confidence            999999999987   56887654

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.76  E-value=1.1e-19  Score=136.45  Aligned_cols=84  Identities=29%  Similarity=0.594  Sum_probs=68.9

Q ss_pred             CccCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      +...++|++++.||+|+||.||+                         +....+.+|+.+|..++|||||++++++++++
T Consensus        20 ~~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~   99 (304)
T 3ubd_A           20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG   99 (304)
T ss_dssp             CCCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETT
T ss_pred             cCCccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC
Confidence            34457899999999999999997                         12235788999999999999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      .+|+|||||+||+|.++|++.  +.++|.+|
T Consensus       100 ~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~  128 (304)
T 3ubd_A          100 KLYLILDFLRGGDLFTRLSKE--VMFTEEDV  128 (304)
T ss_dssp             EEEEEECCCTTCEEHHHHHHH--CCCCHHHH
T ss_pred             EEEEEEEcCCCCCHHHHHHhc--CCCCHHHH
Confidence            999999999999999999986  78888765

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.74  E-value=1.7e-18  Score=128.29  Aligned_cols=80  Identities=25%  Similarity=0.475  Sum_probs=67.3

Q ss_pred             CCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      .++|++.+.||+|+||.||+                       .....+.+|+.+|+.++|||||++++++++++.+|+|
T Consensus        12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv   91 (275)
T 3hyh_A           12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV   91 (275)
T ss_dssp             --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            57899999999999999999                       1234588999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |||| +|+|.++|.++  +.++|+++
T Consensus        92 mEy~-~g~L~~~l~~~--~~l~e~~~  114 (275)
T 3hyh_A           92 IEYA-GNELFDYIVQR--DKMSEQEA  114 (275)
T ss_dssp             EECC-CEEHHHHHHHS--CSCCHHHH
T ss_pred             EeCC-CCCHHHHHHHc--CCCCHHHH
Confidence            9999 68999999886  78888765

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.74  E-value=1e-18  Score=132.81  Aligned_cols=83  Identities=17%  Similarity=0.132  Sum_probs=72.3

Q ss_pred             ccCCCeEEEEEeccCCceEEEe------------c---hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI------------K---KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~------------~---~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      ...+.|.+.+.||+|+||.||+            |   ......+|+.+|..++|||||++++++.+++.+|||||||+|
T Consensus        55 ~~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g  134 (336)
T 4g3f_A           55 EEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG  134 (336)
T ss_dssp             BTTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred             cchhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCC
Confidence            3457799999999999999999            1   122346899999999999999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCCCCCCc
Q 043174          136 GDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       136 g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |+|.++|++.  +.|+|+++
T Consensus       135 g~L~~~l~~~--~~l~e~~~  152 (336)
T 4g3f_A          135 GSLGQLIKQM--GCLPEDRA  152 (336)
T ss_dssp             CBHHHHHHHH--SSCCHHHH
T ss_pred             CcHHHHHHHc--CCCCHHHH
Confidence            9999999886  78888754

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.74  E-value=2.9e-18  Score=128.50  Aligned_cols=77  Identities=25%  Similarity=0.395  Sum_probs=67.5

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS  123 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~  123 (156)
                      ..+..++|.+.+.||+|+||.||+                         ...+.+.+|+.+|++++|||||++++++.++
T Consensus         8 ~~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~   87 (299)
T 4asz_A            8 QHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG   87 (299)
T ss_dssp             CBCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             cccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeC
Confidence            456678899999999999999997                         2245689999999999999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHHhc
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +.+|+|||||++|+|.++|+++
T Consensus        88 ~~~~lV~Ey~~~G~L~~~l~~~  109 (299)
T 4asz_A           88 DPLIMVFEYMKHGDLNKFLRAH  109 (299)
T ss_dssp             SSEEEEEECCTTCBHHHHHHHT
T ss_pred             CEEEEEEEcCCCCcHHHHHHhc
Confidence            9999999999999999999864

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.73  E-value=3.9e-18  Score=127.24  Aligned_cols=78  Identities=28%  Similarity=0.419  Sum_probs=67.1

Q ss_pred             eEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe----CCeEEEE
Q 043174           76 FQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA----SHYSRLV  129 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~----~~~~~lv  129 (156)
                      |++.+.||+|+||.||+                      ...+.+.+|+.+|+.++|||||+++++|.+    +..+|+|
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv  107 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence            47788999999999999                      123568999999999999999999999876    3569999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      ||||+||+|.++|++.  +.++|..+
T Consensus       108 mEy~~gg~L~~~l~~~--~~l~~~~~  131 (290)
T 3fpq_A          108 TELMTSGTLKTYLKRF--KVMKIKVL  131 (290)
T ss_dssp             EECCCSCBHHHHHHHH--SSCCHHHH
T ss_pred             EeCCCCCCHHHHHHhc--CCCCHHHH
Confidence            9999999999999886  67877653

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.73  E-value=4.6e-18  Score=127.80  Aligned_cols=85  Identities=19%  Similarity=0.285  Sum_probs=72.8

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEE
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR  127 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~  127 (156)
                      ..+.+..+++.+.+.||+|+||.||+                   +..+.+.+|+.+|+.++|||||++++++. ++.+|
T Consensus        29 ~~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~  107 (307)
T 3omv_A           29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLA  107 (307)
T ss_dssp             CCCBCCTTSCCEEEECCCCSSSEEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCE
T ss_pred             cCcEEcHHHeEEeeEEeeCCCcEEEEEEECCcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEE
Confidence            45678889999999999999999999                   23467899999999999999999999775 56789


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +|||||+||+|.++|... .+.+++.
T Consensus       108 iVmEy~~gGsL~~~l~~~-~~~l~~~  132 (307)
T 3omv_A          108 IVTQWCEGSSLYKHLHVQ-ETKFQMF  132 (307)
T ss_dssp             EEEECCSSCBHHHHHHTS-CCCCCHH
T ss_pred             EEEEcCCCCCHHHHHhhc-CCCCCHH
Confidence            999999999999999765 3556654

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.72  E-value=8.9e-18  Score=127.37  Aligned_cols=77  Identities=25%  Similarity=0.385  Sum_probs=69.4

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS  123 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~  123 (156)
                      ..+..++|.+.+.||+|+||.||+                         ...+.|.+|+.+|+.++|||||++++++.+.
T Consensus        36 ~~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~  115 (329)
T 4aoj_A           36 HHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEG  115 (329)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             cccCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            456668899999999999999997                         2245689999999999999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHHhc
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +.+|+|||||++|+|.++|+++
T Consensus       116 ~~~~lV~Ey~~~G~L~~~l~~~  137 (329)
T 4aoj_A          116 RPLLMVFEYMRHGDLNRFLRSH  137 (329)
T ss_dssp             SSEEEEEECCTTCBHHHHHHTS
T ss_pred             CEEEEEEEcCCCCcHHHHHHhc
Confidence            9999999999999999999874

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.72  E-value=1.1e-17  Score=125.75  Aligned_cols=78  Identities=21%  Similarity=0.355  Sum_probs=69.3

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEE
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFE  121 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~  121 (156)
                      -..+..+++++.+.||+|+||.||+                          ...+.|.+|+.+|.+++|||||+++|++.
T Consensus        20 ~~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~   99 (308)
T 4gt4_A           20 LKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT   99 (308)
T ss_dssp             CCBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEE
Confidence            3456678899999999999999997                          12356899999999999999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhc
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +++.+++|||||++|+|.++|..+
T Consensus       100 ~~~~~~lV~Ey~~~G~L~~~L~~~  123 (308)
T 4gt4_A          100 KDQPLSMIFSYCSHGDLHEFLVMR  123 (308)
T ss_dssp             SSSSCEEEEECCSSCBHHHHHHTT
T ss_pred             ECCEEEEEEEcCCCCcHHHHHHhh
Confidence            999999999999999999999764

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.69  E-value=2.6e-17  Score=134.46  Aligned_cols=87  Identities=21%  Similarity=0.304  Sum_probs=72.7

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHH---HHHHHhCCCCCCCceeEEEE
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIE---KEILKMLDHPFLPSLFAEFE  121 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E---~~~l~~~~h~~iv~l~~~~~  121 (156)
                      ...+.+++|+++++||+|+||.||+            |           ....+.+|   +.++..++|||||+++++|+
T Consensus       183 ~~~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~  262 (689)
T 3v5w_A          183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH  262 (689)
T ss_dssp             TCCCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE
T ss_pred             CCCCchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEE
Confidence            3467889999999999999999999            1           11234444   45556679999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhcCCCCCCCCCcC
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSAN  156 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a~  156 (156)
                      +.+.+|||||||+||+|+++|++.  +.|+|+.|+
T Consensus       263 ~~~~lylVmEy~~GGdL~~~l~~~--~~l~E~~a~  295 (689)
T 3v5w_A          263 TPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMR  295 (689)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHH--CCCCHHHHH
T ss_pred             ECCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHH
Confidence            999999999999999999999986  789987653

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.69  E-value=2.6e-17  Score=132.94  Aligned_cols=82  Identities=26%  Similarity=0.459  Sum_probs=72.0

Q ss_pred             CCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           73 LDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      +++|++++.||+|+||.||+                    ...+.+.+|+.+|..++|||||+++++|++...+|++|||
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~  235 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  235 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence            57899999999999999998                    1235688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCCCc
Q 043174          133 CPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |+||+|+++|.+. .+.|+|.++
T Consensus       236 ~~gg~L~~~i~~~-~~~l~e~~~  257 (573)
T 3uto_A          236 MSGGELFEKVADE-HNKMSEDEA  257 (573)
T ss_dssp             CCCCBHHHHHTCT-TSCEEHHHH
T ss_pred             cCCCcHHHHHHHh-CCCCCHHHH
Confidence            9999999999754 356777654

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.68  E-value=8e-17  Score=120.65  Aligned_cols=77  Identities=21%  Similarity=0.330  Sum_probs=63.9

Q ss_pred             CCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC--------
Q 043174           74 DQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH--------  124 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~--------  124 (156)
                      ++|++++.||+|+||.||+                     ...+.+.+|+.+|+.++|||||+++++|.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            5699999999999999999                     12356889999999999999999999987644        


Q ss_pred             ----eEEEEEeccCCCCHHHHHHhcCCCCCCC
Q 043174          125 ----YSRLVIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       125 ----~~~lv~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                          .+|++||||+||+|.++++.+  +.+++
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~--~~~~~  114 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGR--CTIEE  114 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTC--CSGGG
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhc--CCCCh
Confidence                489999999999999999875  44444

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.64  E-value=2.2e-16  Score=120.74  Aligned_cols=77  Identities=21%  Similarity=0.284  Sum_probs=66.7

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCC-CCCCCceeEEEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLD-HPFLPSLFAEFE  121 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~-h~~iv~l~~~~~  121 (156)
                      +.+..++|++.+.||+|+||.||+                          ...+.+.+|+.+|..+. |||||++++++.
T Consensus        59 wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~  138 (353)
T 4ase_A           59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT  138 (353)
T ss_dssp             HBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE
Confidence            457778999999999999999998                          12346889999999995 599999999886


Q ss_pred             e-CCeEEEEEeccCCCCHHHHHHhc
Q 043174          122 A-SHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       122 ~-~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      . .+.+|+|||||++|+|.++|++.
T Consensus       139 ~~~~~~~iV~Ey~~~G~L~~~L~~~  163 (353)
T 4ase_A          139 KPGGPLMVIVEFCKFGNLSTYLRSK  163 (353)
T ss_dssp             CTTSCCEEEEECCTTEEHHHHHHHT
T ss_pred             ecCCEEEEEEEcCCCCCHHHHHHhc
Confidence            5 46799999999999999999874

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.62  E-value=2.6e-16  Score=122.06  Aligned_cols=79  Identities=16%  Similarity=0.275  Sum_probs=67.7

Q ss_pred             CCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe------CCe
Q 043174           74 DQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA------SHY  125 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~------~~~  125 (156)
                      ++|++++.||+|+||.||+                      ...+.+.+|+.+|+.++|||||++++++.+      .+.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            6799999999999999999                      123457889999999999999999998764      367


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      +|+|||||+ |+|+++|.+.  +.++|.++
T Consensus       134 ~~ivmE~~~-g~L~~~i~~~--~~l~~~~~  160 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHSS--QPLTLEHV  160 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTSS--SCCCHHHH
T ss_pred             EEEEEeCCC-CCHHHHHHhc--CCCCHHHH
Confidence            999999996 6899999875  77887654

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.59  E-value=2.1e-15  Score=115.62  Aligned_cols=78  Identities=17%  Similarity=0.285  Sum_probs=67.2

Q ss_pred             CCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      .+.|++.+.||+|+||.||+                     .....+.+|+.+|..+ +|||||+++++|++.+.+|+||
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm   99 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM   99 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence            46799999999999999998                     1223578999999988 6999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |||+||+|.++++     .++|.++
T Consensus       100 E~~~g~~L~~~~~-----~l~~~~~  119 (361)
T 4f9c_A          100 PYLEHESFLDILN-----SLSFQEV  119 (361)
T ss_dssp             ECCCCCCHHHHHT-----TCCHHHH
T ss_pred             eCCCcccHHHHHc-----CCCHHHH
Confidence            9999999999984     3666543

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.59  E-value=1.5e-15  Score=113.88  Aligned_cols=72  Identities=21%  Similarity=0.226  Sum_probs=58.0

Q ss_pred             CCeEEEEEeccCCceEEEe---------------chhhhHHHH--HHHHHhCCCCCCCceeEEEEeCC----eEEEEEec
Q 043174           74 DQFQLFRRLGSGIIRSVYI---------------KKRNRVHIE--KEILKMLDHPFLPSLFAEFEASH----YSRLVIEY  132 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~---------------~~~~~~~~E--~~~l~~~~h~~iv~l~~~~~~~~----~~~lv~E~  132 (156)
                      .+|.+.+.||+|+||.||+               ...+.+..|  +..+..++|||||++++++.+++    .+|+||||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey   82 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY   82 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence            3588999999999999999               122334444  44456789999999999987653    68999999


Q ss_pred             cCCCCHHHHHHhc
Q 043174          133 CPGGDLLTVSQRQ  145 (156)
Q Consensus       133 ~~~g~L~~~l~~~  145 (156)
                      |++|+|.++|++.
T Consensus        83 ~~~gsL~~~l~~~   95 (303)
T 3hmm_A           83 HEHGSLFDYLNRY   95 (303)
T ss_dssp             CTTCBHHHHHHHC
T ss_pred             CCCCcHHHHHHhC
Confidence            9999999999874

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.57  E-value=4.1e-15  Score=112.85  Aligned_cols=83  Identities=28%  Similarity=0.480  Sum_probs=72.9

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEE
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR  127 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~  127 (156)
                      +..++|++++.||+|+||.||+                       .....+.+|+.++..++||||+++++++.+.+.+|
T Consensus         2 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   81 (337)
T 1o6l_A            2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC   81 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred             CChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEE
Confidence            4578899999999999999998                       12345788999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      +||||++||+|..++.+.  +.++++.+
T Consensus        82 lv~E~~~gg~L~~~l~~~--~~~~~~~~  107 (337)
T 1o6l_A           82 FVMEYANGGELFFHLSRE--RVFTEERA  107 (337)
T ss_dssp             EEEECCTTCBHHHHHHHH--SCCCHHHH
T ss_pred             EEEeCCCCCcHHHHHHhc--CCCCHHHH
Confidence            999999999999999875  66776543

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.57  E-value=3.9e-15  Score=112.10  Aligned_cols=83  Identities=27%  Similarity=0.614  Sum_probs=72.4

Q ss_pred             CccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      ++..++|++.+.||+|+||.||+                       +..+.+.+|+.++..++||||+++++++.+...+
T Consensus         2 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~   81 (318)
T 1fot_A            2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQI   81 (318)
T ss_dssp             -CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEE
T ss_pred             CCChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEE
Confidence            35678899999999999999998                       1234577899999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      |+||||++||+|.+++++.  +.+++..
T Consensus        82 ~lv~e~~~gg~L~~~l~~~--~~~~~~~  107 (318)
T 1fot_A           82 FMIMDYIEGGELFSLLRKS--QRFPNPV  107 (318)
T ss_dssp             EEEECCCCSCBHHHHHHHT--SSCCHHH
T ss_pred             EEEEeCCCCCCHHHHHHHc--CCCCHHH
Confidence            9999999999999999875  6677654

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.56  E-value=7.2e-15  Score=111.06  Aligned_cols=84  Identities=24%  Similarity=0.455  Sum_probs=73.0

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      .....++|.+.+.||+|+||.||+                      ...+.+.+|+.+++.++||||+++++++.+.+.+
T Consensus        10 ~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~   89 (328)
T 3fe3_A           10 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTL   89 (328)
T ss_dssp             -CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             cCCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEE
Confidence            345578999999999999999998                      1234578999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      |+||||+++|+|.+++...  +.+++..
T Consensus        90 ~lv~e~~~~~~L~~~l~~~--~~l~~~~  115 (328)
T 3fe3_A           90 YLIMEYASGGEVFDYLVAH--GRMKEKE  115 (328)
T ss_dssp             EEEECCCTTCBHHHHHHHH--CCCCHHH
T ss_pred             EEEEECCCCCcHHHHHHHc--CCCCHHH
Confidence            9999999999999999876  6677654

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.56  E-value=5.2e-15  Score=115.16  Aligned_cols=85  Identities=24%  Similarity=0.493  Sum_probs=73.5

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCC
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      ..++..++|.+.+.||+|+||.||+            |           ..+.+.+|+.++..++||||+++++++.+..
T Consensus        63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~  142 (410)
T 3v8s_A           63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR  142 (410)
T ss_dssp             HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence            3456778999999999999999998            1           1234789999999999999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      .+|+||||++||+|.+++++   +.++|..+
T Consensus       143 ~~~lV~E~~~gg~L~~~l~~---~~~~e~~~  170 (410)
T 3v8s_A          143 YLYMVMEYMPGGDLVNLMSN---YDVPEKWA  170 (410)
T ss_dssp             EEEEEECCCTTEEHHHHHHH---CCCCHHHH
T ss_pred             EEEEEEeCCCCCcHHHHHHc---CCCCHHHH
Confidence            99999999999999999986   45776543

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.55  E-value=9.5e-15  Score=111.51  Aligned_cols=85  Identities=34%  Similarity=0.611  Sum_probs=70.8

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCC
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASH  124 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~  124 (156)
                      .++..++|++++.||+|+||.||+                       ...+.+.+|+.++..+ +||||+++++++.+.+
T Consensus        18 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~   97 (353)
T 3txo_A           18 NRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD   97 (353)
T ss_dssp             -----CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             CCCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC
Confidence            356689999999999999999998                       1234578899999988 7999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      .+|+||||++||+|..++++.  +.++|..+
T Consensus        98 ~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~  126 (353)
T 3txo_A           98 RLFFVMEFVNGGDLMFHIQKS--RRFDEARA  126 (353)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH--SSCCHHHH
T ss_pred             EEEEEEeCCCCCcHHHHHHHc--CCCCHHHH
Confidence            999999999999999999886  66776543

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.55  E-value=8e-15  Score=111.64  Aligned_cols=84  Identities=30%  Similarity=0.584  Sum_probs=70.3

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhC-CCCCCCceeEEEEeCC
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKML-DHPFLPSLFAEFEASH  124 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~  124 (156)
                      .++..++|.+.+.||+|+||.||+            |           ..+.+..|+.++..+ +||||+++++++.+..
T Consensus        12 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~   91 (345)
T 1xjd_A           12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE   91 (345)
T ss_dssp             ----CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             CCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC
Confidence            356789999999999999999998            1           234567899999876 9999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      .+|+||||++||+|.+++++.  +.+++..
T Consensus        92 ~~~lv~E~~~gg~L~~~l~~~--~~~~~~~  119 (345)
T 1xjd_A           92 NLFFVMEYLNGGDLMYHIQSC--HKFDLSR  119 (345)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH--SSCCHHH
T ss_pred             EEEEEEeCCCCCcHHHHHHHc--CCCCHHH
Confidence            999999999999999999875  6677654

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.55  E-value=8.8e-15  Score=114.73  Aligned_cols=87  Identities=24%  Similarity=0.416  Sum_probs=74.8

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCC
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      ..++..++|++.++||+|+||.||+            |           ....+.+|+.++..++||||+++++++.+.+
T Consensus        68 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~  147 (437)
T 4aw2_A           68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDN  147 (437)
T ss_dssp             HHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred             cccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC
Confidence            3456778999999999999999999            1           1234889999999999999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      .+|+||||++||+|.+++.+. .+.++|..+
T Consensus       148 ~~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~  177 (437)
T 4aw2_A          148 NLYLVMDYYVGGDLLTLLSKF-EDRLPEEMA  177 (437)
T ss_dssp             EEEEEECCCTTCBHHHHHHTT-TTCCCHHHH
T ss_pred             EEEEEEecCCCCcHHHHHHHc-cCCCCHHHH
Confidence            999999999999999999874 356776543

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.55  E-value=5.8e-15  Score=114.00  Aligned_cols=86  Identities=30%  Similarity=0.534  Sum_probs=75.5

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS  123 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~  123 (156)
                      ....+..++|.+.+.||+|+||.||+                       ...+.+.+|+.++..++||||+++++++.+.
T Consensus         8 ~~~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~   87 (384)
T 4fr4_A            8 ENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDE   87 (384)
T ss_dssp             CCCCCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             CCCCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence            44567789999999999999999998                       1234678899999999999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ..+|+||||++||+|..++++.  +.+++..
T Consensus        88 ~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~  116 (384)
T 4fr4_A           88 EDMFMVVDLLLGGDLRYHLQQN--VHFKEET  116 (384)
T ss_dssp             SEEEEEECCCTTEEHHHHHHTT--CCCCHHH
T ss_pred             CEEEEEEecCCCCcHHHHHHhc--CCCCHHH
Confidence            9999999999999999999875  6677654

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.54  E-value=1.8e-14  Score=109.88  Aligned_cols=86  Identities=33%  Similarity=0.537  Sum_probs=75.1

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS  123 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~  123 (156)
                      .......++|++++.||+|+||.||+                       +..+.+.+|+.++..++||||+++++++.+.
T Consensus        34 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  113 (350)
T 1rdq_E           34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN  113 (350)
T ss_dssp             CCCCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             cccCCCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence            34456789999999999999999998                       1234678899999999999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ..+|+||||++||+|.+++++.  +.+++..
T Consensus       114 ~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~  142 (350)
T 1rdq_E          114 SNLYMVMEYVAGGEMFSHLRRI--GRFSEPH  142 (350)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHH--CCCCHHH
T ss_pred             CEEEEEEcCCCCCcHHHHHHHc--CCCCHHH
Confidence            9999999999999999999886  6677654

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.54  E-value=9.4e-15  Score=113.26  Aligned_cols=85  Identities=34%  Similarity=0.574  Sum_probs=72.3

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCC
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASH  124 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~  124 (156)
                      ..+..++|++++.||+|+||.||+                       ...+.+.+|+.++..+ +||||+++++++.+..
T Consensus        47 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~  126 (396)
T 4dc2_A           47 SSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES  126 (396)
T ss_dssp             --CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             cCCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC
Confidence            356678999999999999999998                       1234578899999876 8999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      .+|+||||++||+|..++++.  +.+++..+
T Consensus       127 ~~~lV~E~~~gg~L~~~l~~~--~~l~~~~~  155 (396)
T 4dc2_A          127 RLFFVIEYVNGGDLMFHMQRQ--RKLPEEHA  155 (396)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH--SSCCHHHH
T ss_pred             EEEEEEEcCCCCcHHHHHHHc--CCCCHHHH
Confidence            999999999999999999886  67777644

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.53  E-value=1.7e-14  Score=112.28  Aligned_cols=88  Identities=26%  Similarity=0.444  Sum_probs=75.4

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS  123 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~  123 (156)
                      ...++..++|++.+.||+|+||.||+                       ...+.+.+|+.++..++||||+++++++.+.
T Consensus        54 ~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~  133 (412)
T 2vd5_A           54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDE  133 (412)
T ss_dssp             HHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred             hhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence            34467789999999999999999999                       1234578999999999999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      +.+|+||||++||+|.+++.+. ...++++.+
T Consensus       134 ~~~~lVmE~~~gg~L~~~l~~~-~~~l~~~~~  164 (412)
T 2vd5_A          134 NYLYLVMEYYVGGDLLTLLSKF-GERIPAEMA  164 (412)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHH-SSCCCHHHH
T ss_pred             CEEEEEEcCCCCCcHHHHHHhc-CCCCCHHHH
Confidence            9999999999999999999875 235776543

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.53  E-value=1.7e-14  Score=109.74  Aligned_cols=83  Identities=34%  Similarity=0.575  Sum_probs=72.4

Q ss_pred             CccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCe
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHY  125 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~  125 (156)
                      .+..++|++.+.||+|+||.||+                       ...+.+.+|+.++..+ +||||+++++++.+...
T Consensus         5 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~   84 (345)
T 3a8x_A            5 PLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR   84 (345)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             CCchhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCE
Confidence            45678899999999999999998                       1234578899999987 89999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      +|+||||++||+|.+++++.  +.+++..
T Consensus        85 ~~lv~e~~~gg~L~~~l~~~--~~l~~~~  111 (345)
T 3a8x_A           85 LFFVIEYVNGGDLMFHMQRQ--RKLPEEH  111 (345)
T ss_dssp             EEEEECCCCSCBHHHHHHHH--SSCCHHH
T ss_pred             EEEEEeCCCCCcHHHHHHHc--CCCCHHH
Confidence            99999999999999999876  6677654

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.53  E-value=3.7e-14  Score=106.73  Aligned_cols=81  Identities=19%  Similarity=0.274  Sum_probs=70.5

Q ss_pred             CCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      .++|.+.+.||+|+||.||+                   .....+.+|+.++..++||||+++++++.+.+.+++||||+
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~   83 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence            57899999999999999998                   12345789999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCCCCC
Q 043174          134 PGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      +||+|.+++... ...+++..
T Consensus        84 ~g~~L~~~l~~~-~~~~~~~~  103 (321)
T 1tki_A           84 SGLDIFERINTS-AFELNERE  103 (321)
T ss_dssp             CCCBHHHHHTSS-SCCCCHHH
T ss_pred             CCCCHHHHHHhc-CCCCCHHH
Confidence            999999999764 24566543

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.52  E-value=2.3e-14  Score=109.72  Aligned_cols=81  Identities=26%  Similarity=0.345  Sum_probs=71.2

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------c--------------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------K--------------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------~--------------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      ..+.|.+.+.||+|+||.||+            |              ..+.+.+|+.++..++||||+++++++.+...
T Consensus        10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~   89 (361)
T 2yab_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD   89 (361)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence            357799999999999999999            0              12468899999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      +|+||||++||+|.+++...  +.++|..
T Consensus        90 ~~lv~e~~~gg~L~~~l~~~--~~l~~~~  116 (361)
T 2yab_A           90 VVLILELVSGGELFDFLAQK--ESLSEEE  116 (361)
T ss_dssp             EEEEEECCCSCBHHHHHTTC--SCCBHHH
T ss_pred             EEEEEEcCCCCcHHHHHHhc--CCCCHHH
Confidence            99999999999999999875  6677654

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.51  E-value=4.4e-14  Score=105.25  Aligned_cols=81  Identities=15%  Similarity=0.250  Sum_probs=71.2

Q ss_pred             ccCCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      +..++|.+.+.||+|+||.||+                    ...+.+.+|+.++..++||||+++++++.+++.+++||
T Consensus         7 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   86 (310)
T 3s95_A            7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIT   86 (310)
T ss_dssp             ECGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             eChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEE
Confidence            4568899999999999999999                    23456889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      ||+++|+|.++++.. .+.+++
T Consensus        87 e~~~~~~L~~~l~~~-~~~~~~  107 (310)
T 3s95_A           87 EYIKGGTLRGIIKSM-DSQYPW  107 (310)
T ss_dssp             ECCTTCBHHHHHHHC-CTTSCH
T ss_pred             EecCCCcHHHHHHhc-cCCCCH
Confidence            999999999999874 344554

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.51  E-value=2.9e-14  Score=108.86  Aligned_cols=84  Identities=30%  Similarity=0.499  Sum_probs=70.7

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCC
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASH  124 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~  124 (156)
                      .++..++|.+++.||+|+||.||+                       ...+.+..|+.++..+ +||||+++++++.+.+
T Consensus        15 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~   94 (353)
T 2i0e_A           15 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD   94 (353)
T ss_dssp             ----CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS
T ss_pred             CCCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC
Confidence            356689999999999999999998                       1234577899999887 8999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      .+|+||||++||+|.+++++.  +.+++..
T Consensus        95 ~~~lv~E~~~gg~L~~~l~~~--~~~~~~~  122 (353)
T 2i0e_A           95 RLYFVMEYVNGGDLMYHIQQV--GRFKEPH  122 (353)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH--SSCCHHH
T ss_pred             EEEEEEeCCCCCcHHHHHHhc--CCCCHHH
Confidence            999999999999999999876  6677654

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.51  E-value=4e-14  Score=105.08  Aligned_cols=83  Identities=23%  Similarity=0.344  Sum_probs=72.3

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      +....++|++.+.||+|+||.||+                       ...+.+.+|+.++..++||||+++++++.+.+.
T Consensus         6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~   85 (294)
T 4eqm_A            6 GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDC   85 (294)
T ss_dssp             SSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSE
T ss_pred             hhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCe
Confidence            344567899999999999999998                       123467899999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +|+||||++||+|.+++.+.  +.+++.
T Consensus        86 ~~lv~e~~~g~~L~~~l~~~--~~~~~~  111 (294)
T 4eqm_A           86 YYLVMEYIEGPTLSEYIESH--GPLSVD  111 (294)
T ss_dssp             EEEEEECCCSCBHHHHHHHH--CSCCHH
T ss_pred             EEEEEeCCCCCCHHHHHHhc--CCCCHH
Confidence            99999999999999999876  566654

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.50  E-value=2.2e-14  Score=107.95  Aligned_cols=86  Identities=22%  Similarity=0.300  Sum_probs=72.8

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA  122 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~  122 (156)
                      ....+..++|.+.+.||+|+||.||+                        ...+.+.+|+.++..++||||+++++++.+
T Consensus        42 ~~~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  121 (325)
T 3kul_A           42 FTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR  121 (325)
T ss_dssp             -CCBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG
T ss_pred             hccccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence            44566778899999999999999997                        123468899999999999999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          123 SHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       123 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      .+.+++||||+++|+|.++++.. .+.+++.
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~  151 (325)
T 3kul_A          122 GRLAMIVTEYMENGSLDTFLRTH-DGQFTIM  151 (325)
T ss_dssp             GGCCEEEEECCTTCBHHHHHHTT-TTCSCHH
T ss_pred             CCccEEEeeCCCCCcHHHHHHhc-ccCCCHH
Confidence            99999999999999999999764 3455543

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.50  E-value=2.8e-14  Score=112.05  Aligned_cols=80  Identities=23%  Similarity=0.419  Sum_probs=69.0

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      .++|.+.+.||+|+||.||+                      ...+.+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence            46799999999999999998                      12346789999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ||++||+|.+++...  +.++|..
T Consensus        90 E~~~gg~L~~~i~~~--~~~~e~~  111 (444)
T 3soa_A           90 DLVTGGELFEDIVAR--EYYSEAD  111 (444)
T ss_dssp             CCCBCCBHHHHHHHC--SCCCHHH
T ss_pred             EeCCCCCHHHHHHHc--CCCCHHH
Confidence            999999999999885  6677654

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.49  E-value=5.9e-14  Score=107.23  Aligned_cols=82  Identities=22%  Similarity=0.304  Sum_probs=71.8

Q ss_pred             ccCCCeEEEEEeccCCceEEEe------------c-------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI------------K-------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~------------~-------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      ...++|.+.+.||+|+||.||+            |       ..+.+.+|+.+++.++||||+++++++.+...+++|||
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e   96 (361)
T 3uc3_A           17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME   96 (361)
T ss_dssp             CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence            3457899999999999999998            1       23468899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      |+++|+|.+++...  +.+++..
T Consensus        97 ~~~~~~L~~~l~~~--~~~~~~~  117 (361)
T 3uc3_A           97 YASGGELYERICNA--GRFSEDE  117 (361)
T ss_dssp             CCCSCBHHHHHHHH--SSCCHHH
T ss_pred             eCCCCCHHHHHHhc--CCCCHHH
Confidence            99999999999875  5676643

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.49  E-value=3.4e-14  Score=107.03  Aligned_cols=84  Identities=29%  Similarity=0.502  Sum_probs=68.3

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe---------------c------------hhhhHHHHHHHHHhCCCCCCCceeEEEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI---------------K------------KRNRVHIEKEILKMLDHPFLPSLFAEFE  121 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~---------------~------------~~~~~~~E~~~l~~~~h~~iv~l~~~~~  121 (156)
                      ..+..++|++.+.||+|+||.||+               |            ....+.+|+.++..++||||+++++++.
T Consensus        12 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   91 (327)
T 3a62_A           12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQ   91 (327)
T ss_dssp             -CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEE
T ss_pred             CCCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEE
Confidence            456678899999999999999996               1            1234678999999999999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      +.+.+|+||||+++|+|.+++.+.  +.+++..
T Consensus        92 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~  122 (327)
T 3a62_A           92 TGGKLYLILEYLSGGELFMQLERE--GIFMEDT  122 (327)
T ss_dssp             CSSCEEEEEECCTTEEHHHHHHHH--SSCCHHH
T ss_pred             cCCEEEEEEeCCCCCcHHHHHHhC--CCCCHHH
Confidence            999999999999999999999875  5666543

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.49  E-value=3.9e-14  Score=108.32  Aligned_cols=80  Identities=21%  Similarity=0.366  Sum_probs=70.2

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      .++|.+.+.||+|+||.||+                      ...+.+.+|+.++..++||||+++++++.+.+.+|+||
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            35699999999999999998                      12356789999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ||++||+|.+++...  +.+++..
T Consensus       108 e~~~gg~L~~~l~~~--~~~~~~~  129 (362)
T 2bdw_A          108 DLVTGGELFEDIVAR--EFYSEAD  129 (362)
T ss_dssp             CCCCSCBHHHHHTTC--SCCCHHH
T ss_pred             ecCCCCCHHHHHHHc--CCCCHHH
Confidence            999999999999875  5666543

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.48  E-value=2.8e-14  Score=112.94  Aligned_cols=86  Identities=24%  Similarity=0.420  Sum_probs=75.1

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS  123 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~  123 (156)
                      ..+.+..++|.+.+.||+|+||.||+            |           ..+.+.+|+.+++.++||||+++++++.+.
T Consensus         9 ~~~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~   88 (476)
T 2y94_A            9 HDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTP   88 (476)
T ss_dssp             CCSCCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             cCCCceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            45567789999999999999999998            1           134678999999999999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ..+|+||||+++|+|.+++.+.  +.+++..
T Consensus        89 ~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~  117 (476)
T 2y94_A           89 SDIFMVMEYVSGGELFDYICKN--GRLDEKE  117 (476)
T ss_dssp             SEEEEEEECCSSEEHHHHTTSS--SSCCHHH
T ss_pred             CEEEEEEeCCCCCcHHHHHHhc--CCCCHHH
Confidence            9999999999999999999875  6677654

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.48  E-value=6e-14  Score=113.29  Aligned_cols=87  Identities=26%  Similarity=0.315  Sum_probs=74.3

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      ...+..++|.+.+.||+|+||.||+                       +....+.+|+.+|..++||||+++++++.+.+
T Consensus       178 ~~~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~  257 (576)
T 2acx_A          178 RQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD  257 (576)
T ss_dssp             TSCCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hcCccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC
Confidence            4457788999999999999999998                       12235788999999999999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      .+|+||||++||+|.+++.......+++..
T Consensus       258 ~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~  287 (576)
T 2acx_A          258 ALCLVLTLMNGGDLKFHIYHMGQAGFPEAR  287 (576)
T ss_dssp             EEEEEECCCCSCBHHHHHHSSSSCCCCHHH
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCCCCCCHHH
Confidence            999999999999999999875333466654

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.48  E-value=5.8e-14  Score=107.61  Aligned_cols=77  Identities=22%  Similarity=0.330  Sum_probs=68.8

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe----------------------------chhhhHHHHHHHHHhC-CCCCCCceeEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI----------------------------KKRNRVHIEKEILKML-DHPFLPSLFAE  119 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~----------------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~  119 (156)
                      ..+..++|.+.+.||+|+||.||+                            +..+.+.+|+.++..+ +||||++++++
T Consensus        76 ~~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~  155 (370)
T 2psq_A           76 WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA  155 (370)
T ss_dssp             TBCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEE
T ss_pred             ccccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence            356678999999999999999995                            1234688999999999 89999999999


Q ss_pred             EEeCCeEEEEEeccCCCCHHHHHHhc
Q 043174          120 FEASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       120 ~~~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +.+.+.+|+||||+++|+|.++++..
T Consensus       156 ~~~~~~~~lv~e~~~~g~L~~~l~~~  181 (370)
T 2psq_A          156 CTQDGPLYVIVEYASKGNLREYLRAR  181 (370)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHT
T ss_pred             EccCCCEEEEEEcCCCCCHHHHHHhh
Confidence            99999999999999999999999875

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.48  E-value=2.4e-14  Score=110.13  Aligned_cols=85  Identities=28%  Similarity=0.527  Sum_probs=65.1

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHH-HHhCCCCCCCceeEEEEeCC
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEI-LKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~-l~~~~h~~iv~l~~~~~~~~  124 (156)
                      .....++|++++.||+|+||.||+            |           ....+..|..+ +..++||||+++++++.+.+
T Consensus        33 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~  112 (373)
T 2r5t_A           33 PHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD  112 (373)
T ss_dssp             TTCCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSS
T ss_pred             CCCChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC
Confidence            345678899999999999999998            1           12345666666 45679999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      .+|+||||++||+|.+++++.  +.++|..+
T Consensus       113 ~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~  141 (373)
T 2r5t_A          113 KLYFVLDYINGGELFYHLQRE--RCFLEPRA  141 (373)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH--SSCCHHHH
T ss_pred             EEEEEEeCCCCCcHHHHHHhc--CCCCHHHH
Confidence            999999999999999999886  66776543

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.47  E-value=1.3e-13  Score=106.03  Aligned_cols=84  Identities=15%  Similarity=0.139  Sum_probs=72.4

Q ss_pred             CccCCCeEEEEEeccC--CceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           70 QVGLDQFQLFRRLGSG--IIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G--~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      ....++|++.+.||+|  +||.||+                      ...+.+.+|+.+++.++||||+++++++.+.+.
T Consensus        21 ~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  100 (389)
T 3gni_B           21 LPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE  100 (389)
T ss_dssp             CCCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             cCCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCE
Confidence            3456789999999999  9999999                      123567889999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +|+||||+++|+|.+++.......+++.
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~  128 (389)
T 3gni_B          101 LWVVTSFMAYGSAKDLICTHFMDGMNEL  128 (389)
T ss_dssp             EEEEEECCTTCBHHHHHHHTCTTCCCHH
T ss_pred             EEEEEEccCCCCHHHHHhhhcccCCCHH
Confidence            9999999999999999987544556654

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.47  E-value=9.5e-14  Score=101.40  Aligned_cols=84  Identities=23%  Similarity=0.261  Sum_probs=72.4

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      +.+..++|++.+.||+|+||.||+                  ...+.+.+|+.++..++||||+++++++.+...++++|
T Consensus         5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   84 (269)
T 4hcu_A            5 WVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF   84 (269)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             EEeChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence            456678899999999999999999                  12356889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||+++|+|.+++... .+.+++.
T Consensus        85 e~~~~~~L~~~l~~~-~~~~~~~  106 (269)
T 4hcu_A           85 EFMEHGCLSDYLRTQ-RGLFAAE  106 (269)
T ss_dssp             ECCTTCBHHHHHHTT-TTCCCHH
T ss_pred             EeCCCCcHHHHHHhc-CcccCHH
Confidence            999999999999765 2445543

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.47  E-value=3.9e-14  Score=106.59  Aligned_cols=80  Identities=24%  Similarity=0.475  Sum_probs=69.3

Q ss_pred             CCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           73 LDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      .++|++.+.||+|+||.||+                     ...+.+.+|+.++..++||||+++++++.+.+..|+|||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            58899999999999999998                     113568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      |+++|+|.+++...  +.+++..
T Consensus        86 ~~~~~~L~~~l~~~--~~~~~~~  106 (323)
T 3tki_A           86 YCSGGELFDRIEPD--IGMPEPD  106 (323)
T ss_dssp             CCTTEEGGGGSBTT--TBCCHHH
T ss_pred             cCCCCcHHHHHhhc--CCCCHHH
Confidence            99999999999764  5566543

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.47  E-value=1.9e-13  Score=101.55  Aligned_cols=79  Identities=19%  Similarity=0.339  Sum_probs=69.5

Q ss_pred             cCCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      ..++|.+.+.||+|+||.||+                    ...+.+.+|+.++..++||||+++++++.+.+.+++|||
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   97 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence            457799999999999999998                    123458899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |+++|+|.+++.+.   .+++.
T Consensus        98 ~~~~~~L~~~~~~~---~~~~~  116 (297)
T 3fxz_A           98 YLAGGSLTDVVTET---CMDEG  116 (297)
T ss_dssp             CCTTCBHHHHHHHS---CCCHH
T ss_pred             CCCCCCHHHHHhhc---CCCHH
Confidence            99999999999873   46554

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.46  E-value=5.8e-14  Score=106.63  Aligned_cols=80  Identities=28%  Similarity=0.350  Sum_probs=69.4

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      .++|++.+.||+|+||.||+                +......+|++++..+ +||||+++++++.+...+|+||||++|
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~g  100 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKG  100 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCC
Confidence            46799999999999999999                2233567899999887 799999999999999999999999999


Q ss_pred             CCHHHHHHhcCCCCCCCCC
Q 043174          136 GDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       136 g~L~~~l~~~~~~~~~e~~  154 (156)
                      |+|.+++.+.  +.++|..
T Consensus       101 g~L~~~i~~~--~~~~~~~  117 (342)
T 2qr7_A          101 GELLDKILRQ--KFFSERE  117 (342)
T ss_dssp             CBHHHHHHTC--TTCCHHH
T ss_pred             CcHHHHHHHc--CCCCHHH
Confidence            9999999875  6677654

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.46  E-value=8.3e-14  Score=105.91  Aligned_cols=80  Identities=29%  Similarity=0.343  Sum_probs=64.9

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      ..+.|.+.+.||+|+||.||+                  ...+.+.+|+.++..++||||+++++++.+...+++||||+
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  130 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV  130 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeC
Confidence            357799999999999999998                  12345778999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCCCC
Q 043174          134 PGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++|+|.+++...  +.+++.
T Consensus       131 ~~~~L~~~l~~~--~~~~~~  148 (349)
T 2w4o_A          131 TGGELFDRIVEK--GYYSER  148 (349)
T ss_dssp             CSCBHHHHHTTC--SSCCHH
T ss_pred             CCCCHHHHHHhc--CCCCHH
Confidence            999999999875  556654

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.46  E-value=1.2e-13  Score=101.34  Aligned_cols=83  Identities=30%  Similarity=0.489  Sum_probs=72.4

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      ..+..++|.+.+.||+|+||.||+            |           ....+.+|+.++..++||||+++++++.+...
T Consensus         4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   83 (279)
T 3fdn_A            4 RQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR   83 (279)
T ss_dssp             CCCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             ceeecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCE
Confidence            456789999999999999999998            1           13457889999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++++|||+++|+|.+++.+.  +.+++.
T Consensus        84 ~~lv~e~~~~~~l~~~l~~~--~~~~~~  109 (279)
T 3fdn_A           84 VYLILEYAPLGTVYRELQKL--SKFDEQ  109 (279)
T ss_dssp             EEEEECCCTTEEHHHHHHHH--SSCCHH
T ss_pred             EEEEEecCCCCcHHHHHHhc--CCCCHH
Confidence            99999999999999999875  556553

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.46  E-value=2.1e-13  Score=102.68  Aligned_cols=80  Identities=26%  Similarity=0.369  Sum_probs=69.9

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c--------------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K--------------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~--------------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      .+.|.+.+.||+|+||.||+            |              ..+.+.+|+.++..++||||+++++++.+...+
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   89 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   89 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            35699999999999999999            1              134688999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ++||||+++|+|.+++...  +.+++..
T Consensus        90 ~lv~e~~~~~~L~~~l~~~--~~~~~~~  115 (326)
T 2y0a_A           90 ILILELVAGGELFDFLAEK--ESLTEEE  115 (326)
T ss_dssp             EEEEECCCSCBHHHHHTTS--SCCBHHH
T ss_pred             EEEEEcCCCCCHHHHHHhc--CCcCHHH
Confidence            9999999999999999875  5666543

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.45  E-value=1.9e-13  Score=108.63  Aligned_cols=81  Identities=32%  Similarity=0.469  Sum_probs=68.8

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------c---------------------hhhhHHHHHHHHHhCCCCCCCceeE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------K---------------------KRNRVHIEKEILKMLDHPFLPSLFA  118 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------~---------------------~~~~~~~E~~~l~~~~h~~iv~l~~  118 (156)
                      ..+.|.+++.||+|+||.||+            |                     ..+.+.+|+.++..++||||+++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            357899999999999999998            1                     0235788999999999999999999


Q ss_pred             EEEeCCeEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          119 EFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       119 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ++.+...+|+|||||+||+|.+++...  +.+++..
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~  147 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIINR--HKFDECD  147 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHH
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHHc--CCCCHHH
Confidence            999999999999999999999999875  6677653

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.45  E-value=2.6e-13  Score=100.61  Aligned_cols=74  Identities=15%  Similarity=0.170  Sum_probs=66.6

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEE
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR  127 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~  127 (156)
                      +..+.|++.+.||+|+||.||+                       ...+.+.+|+.++..++||||+++++++.+.+.+|
T Consensus        28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~  107 (286)
T 3uqc_A           28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGL  107 (286)
T ss_dssp             ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEE
Confidence            4457799999999999999999                       11256899999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHh
Q 043174          128 LVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~  144 (156)
                      +||||++|++|.+++++
T Consensus       108 lv~e~~~g~~L~~~l~~  124 (286)
T 3uqc_A          108 VVAEWIRGGSLQEVADT  124 (286)
T ss_dssp             EEEECCCEEEHHHHHTT
T ss_pred             EEEEecCCCCHHHHHhc
Confidence            99999999999999965

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.45  E-value=1e-13  Score=102.05  Aligned_cols=76  Identities=16%  Similarity=0.231  Sum_probs=68.2

Q ss_pred             CccCCCeEEEEEeccCCceEEEe---------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI---------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA  122 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~---------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~  122 (156)
                      ++..++|.+.+.||+|+||.||+                           ...+.+.+|+.++..++||||+++++++.+
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   83 (289)
T 4fvq_A            4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC   83 (289)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC
T ss_pred             EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe
Confidence            45568899999999999999998                           123458899999999999999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHHHhc
Q 043174          123 SHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       123 ~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ++..++||||+++|+|.+++.+.
T Consensus        84 ~~~~~lv~e~~~~~~L~~~l~~~  106 (289)
T 4fvq_A           84 GDENILVQEFVKFGSLDTYLKKN  106 (289)
T ss_dssp             TTCCEEEEECCTTCBHHHHHHHT
T ss_pred             CCCCEEEEECCCCCCHHHHHHhC
Confidence            99999999999999999999875

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.45  E-value=1.9e-13  Score=102.29  Aligned_cols=80  Identities=19%  Similarity=0.306  Sum_probs=69.4

Q ss_pred             hccCCccCCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           66 QEHGQVGLDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        66 ~~~~~~~~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      .....+..++|.+.+.||+|+||.||+                    ...+.+.+|+.++..++||||+++++++.+...
T Consensus        29 ~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  108 (309)
T 3p86_A           29 GDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN  108 (309)
T ss_dssp             ---CBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred             cccccCChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence            344556778999999999999999999                    123467899999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhc
Q 043174          126 SRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +++||||+++|+|.+++.+.
T Consensus       109 ~~lv~e~~~~~~L~~~l~~~  128 (309)
T 3p86_A          109 LSIVTEYLSRGSLYRLLHKS  128 (309)
T ss_dssp             CEEEEECCTTCBHHHHHHST
T ss_pred             eEEEEecCCCCcHHHHHhhc
Confidence            99999999999999999864

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.45  E-value=3.2e-14  Score=103.58  Aligned_cols=85  Identities=14%  Similarity=0.297  Sum_probs=72.0

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC--CeE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS--HYS  126 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~--~~~  126 (156)
                      ..+..++|.+.+.||+|+||.||+                    ...+.+.+|+.++..++||||+++++++.+.  ..+
T Consensus         5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   84 (271)
T 3kmu_A            5 SGIDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHP   84 (271)
T ss_dssp             CCCCGGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSC
T ss_pred             CCCCHHHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCe
Confidence            456678899999999999999999                    1234688999999999999999999999887  789


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +++|||+++|+|.+++.+.....+++.
T Consensus        85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~  111 (271)
T 3kmu_A           85 TLITHWMPYGSLYNVLHEGTNFVVDQS  111 (271)
T ss_dssp             EEEEECCTTCBHHHHHHSCSSCCCCHH
T ss_pred             EeeecccCCCcHHHHHhhcccCCCCHH
Confidence            999999999999999987633345553

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.45  E-value=1.2e-13  Score=106.67  Aligned_cols=80  Identities=28%  Similarity=0.430  Sum_probs=69.6

Q ss_pred             CCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           73 LDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      .+.|.+.+.||+|+||.||+                    .....+.+|+.++..++||||+++++++.+...+++||||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            47899999999999999998                    1234678999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +++|+|.+++... ...+++.
T Consensus       130 ~~gg~L~~~l~~~-~~~l~~~  149 (387)
T 1kob_A          130 LSGGELFDRIAAE-DYKMSEA  149 (387)
T ss_dssp             CCCCBHHHHTTCT-TCCBCHH
T ss_pred             CCCCcHHHHHHhh-cCCCCHH
Confidence            9999999999764 2356654

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.45  E-value=9.6e-14  Score=105.32  Aligned_cols=81  Identities=27%  Similarity=0.424  Sum_probs=70.4

Q ss_pred             ccCCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEE
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR  127 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~  127 (156)
                      ...++|.+.+.||+|+||.||+            |           ....+.+|+.+++.++||||+++++++.++..++
T Consensus         6 ~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~   85 (336)
T 3h4j_B            6 RHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIV   85 (336)
T ss_dssp             SEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence            4468899999999999999998            1           1235789999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      +||||+ +|+|.+++...  +.+++..
T Consensus        86 lv~E~~-~g~l~~~l~~~--~~l~~~~  109 (336)
T 3h4j_B           86 MVIEYA-GGELFDYIVEK--KRMTEDE  109 (336)
T ss_dssp             EEECCC-CEEHHHHHHHH--CSCCHHH
T ss_pred             EEEECC-CCcHHHHHHHc--CCCCHHH
Confidence            999999 68999999875  6677654

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.45  E-value=2.4e-13  Score=106.71  Aligned_cols=86  Identities=17%  Similarity=0.268  Sum_probs=72.8

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe----------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC-eEEEE
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI----------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH-YSRLV  129 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~----------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~-~~~lv  129 (156)
                      ..+.+..++|++.+.||+|+||.||+                ...+.+.+|+.+|..++||||+++++++.... .+|+|
T Consensus       186 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv  265 (450)
T 1k9a_A          186 SGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV  265 (450)
T ss_dssp             TTCBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred             cccccChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence            45667789999999999999999999                23457899999999999999999999887654 79999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCC
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      |||+++|+|.++++......+++
T Consensus       266 ~e~~~~g~L~~~l~~~~~~~~~~  288 (450)
T 1k9a_A          266 TEYMAKGSLVDYLRSRGRSVLGG  288 (450)
T ss_dssp             EECCTTCBHHHHHHHHCTTTCCH
T ss_pred             EEecCCCcHHHHHHhcCCCCCCH
Confidence            99999999999998763223444

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.45  E-value=1.6e-13  Score=104.32  Aligned_cols=86  Identities=23%  Similarity=0.371  Sum_probs=74.8

Q ss_pred             hccCCccCCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC
Q 043174           66 QEHGQVGLDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        66 ~~~~~~~~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      ...+.+..++|.+.+.||+|+||.||+                     ...+.+.+|+.++..++||||+++++++.+.+
T Consensus        25 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  104 (360)
T 3eqc_A           25 QKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG  104 (360)
T ss_dssp             HTCCCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT
T ss_pred             hcccccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC
Confidence            345567788999999999999999998                     12356889999999999999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      .+++||||+++|+|.+++++.  +.+++.
T Consensus       105 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~  131 (360)
T 3eqc_A          105 EISICMEHMDGGSLDQVLKKA--GRIPEQ  131 (360)
T ss_dssp             EEEEEECCCTTCBHHHHHHHH--SSCCHH
T ss_pred             EEEEEEECCCCCCHHHHHHHc--CCCCHH
Confidence            999999999999999999875  556553

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.44  E-value=1.2e-13  Score=101.63  Aligned_cols=87  Identities=20%  Similarity=0.266  Sum_probs=74.8

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEE
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR  127 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~  127 (156)
                      ..+.+..++|.+.+.||+|+||.||+                   ...+.+.+|+.++..++||||+++++++.+...++
T Consensus         6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   85 (288)
T 3kfa_A            6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY   85 (288)
T ss_dssp             CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred             hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE
Confidence            34566778899999999999999999                   23456889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +||||+++|+|.++++......+++.
T Consensus        86 ~v~e~~~~~~L~~~~~~~~~~~~~~~  111 (288)
T 3kfa_A           86 IITEFMTYGNLLDYLRECNRQEVSAV  111 (288)
T ss_dssp             EEEECCTTEEHHHHHHHCCTTTSCHH
T ss_pred             EEEEcCCCCcHHHHHHhcccCCccHh
Confidence            99999999999999987534445543

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.44  E-value=1.6e-13  Score=108.96  Aligned_cols=85  Identities=20%  Similarity=0.269  Sum_probs=72.9

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      .+.+..++|.+.+.||+|+||.||+                   ...+.+.+|+.+|..++||||+++++++.+...+|+
T Consensus       214 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l  293 (495)
T 1opk_A          214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI  293 (495)
T ss_dssp             CCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             ccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence            3456678899999999999999998                   134578999999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      ||||+++|+|.++|+......+++
T Consensus       294 v~E~~~~g~L~~~l~~~~~~~~~~  317 (495)
T 1opk_A          294 ITEFMTYGNLLDYLRECNRQEVSA  317 (495)
T ss_dssp             EEECCTTCBHHHHHHHSCTTTSCH
T ss_pred             EEEccCCCCHHHHHHhcCcCCCCH
Confidence            999999999999998753334443

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.44  E-value=1.9e-13  Score=100.50  Aligned_cols=85  Identities=28%  Similarity=0.491  Sum_probs=72.3

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS  123 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~  123 (156)
                      +...+..++|.+.+.||+|+||.||+            |           ..+.+.+|+.++..++||||+++++++.+.
T Consensus         7 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   86 (284)
T 2vgo_A            7 PKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDR   86 (284)
T ss_dssp             ---CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             CccchhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcC
Confidence            34466778999999999999999999            1           124578899999999999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +.++++|||+++|+|.+++...  +.+++.
T Consensus        87 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~  114 (284)
T 2vgo_A           87 KRIYLMLEFAPRGELYKELQKH--GRFDEQ  114 (284)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHH--SSCCHH
T ss_pred             CEEEEEEEeCCCCcHHHHHHhc--CCCCHH
Confidence            9999999999999999999875  556654

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.44  E-value=2.1e-13  Score=108.05  Aligned_cols=79  Identities=29%  Similarity=0.518  Sum_probs=66.5

Q ss_pred             CCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           74 DQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      +.|.+.+.||+|+||.||+                      .....+.+|+.+++.++||||+++++++.+...+|+|||
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            4699999999999999998                      123467899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      |+++|+|.+++...  +.+++..
T Consensus       117 ~~~~g~L~~~~~~~--~~~~~~~  137 (494)
T 3lij_A          117 CYKGGELFDEIIHR--MKFNEVD  137 (494)
T ss_dssp             CCCSCBHHHHHHHH--SSCCHHH
T ss_pred             cCCCCcHHHHHHHc--CCCCHHH
Confidence            99999999999875  5666543

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.44  E-value=1.5e-13  Score=101.01  Aligned_cols=86  Identities=20%  Similarity=0.297  Sum_probs=70.6

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      ..+.+..++|++.+.||+|+||.||+                  ...+.+.+|+.++..++||||+++++++.+...+++
T Consensus        17 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   96 (283)
T 3gen_A           17 GSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI   96 (283)
T ss_dssp             CTTBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             CCccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEE
Confidence            44567778999999999999999998                  123568899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||||+++|+|.+++... ...+++.
T Consensus        97 v~e~~~~~~L~~~l~~~-~~~~~~~  120 (283)
T 3gen_A           97 ITEYMANGCLLNYLREM-RHRFQTQ  120 (283)
T ss_dssp             EECCCTTCBHHHHHHCG-GGCCCHH
T ss_pred             EEeccCCCcHHHHHHHh-ccCCCHH
Confidence            99999999999999763 2445543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.44  E-value=5.2e-14  Score=108.02  Aligned_cols=77  Identities=25%  Similarity=0.366  Sum_probs=68.4

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe------------c---------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI------------K---------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR  127 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~------------~---------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~  127 (156)
                      +.+..++|.+.+.||+|+||.||+            |         ..+.+.+|+.+|..++||||+++++++.+.+.+|
T Consensus       109 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  188 (377)
T 3cbl_A          109 WVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIY  188 (377)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred             cEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcE
Confidence            345667899999999999999998            1         2246788999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhc
Q 043174          128 LVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~  145 (156)
                      +||||+++|+|.++++..
T Consensus       189 lv~e~~~~g~L~~~l~~~  206 (377)
T 3cbl_A          189 IVMELVQGGDFLTFLRTE  206 (377)
T ss_dssp             EEEECCTTCBHHHHHHHH
T ss_pred             EEEEcCCCCCHHHHHHhc
Confidence            999999999999999864

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.44  E-value=3.4e-13  Score=98.61  Aligned_cols=84  Identities=26%  Similarity=0.415  Sum_probs=71.9

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCC
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      .+.+..++|.+.+.||+|+||.||+            |           ..+.+.+|+.++..++||||+++++++.+.+
T Consensus         5 ~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   84 (276)
T 2h6d_A            5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT   84 (276)
T ss_dssp             --CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             cCcceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence            4566778999999999999999998            1           1235788999999999999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      .++++|||+++++|.+++...  +.+++.
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~  111 (276)
T 2h6d_A           85 DFFMVMEYVSGGELFDYICKH--GRVEEM  111 (276)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH--CSCCHH
T ss_pred             eEEEEEeccCCCcHHHHHhcc--CCCCHH
Confidence            999999999999999999875  556553

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.44  E-value=2e-13  Score=109.62  Aligned_cols=86  Identities=30%  Similarity=0.367  Sum_probs=73.1

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      ..+..++|.+.+.||+|+||.||+                       +..+.+.+|+.++..++||||+++++++.+...
T Consensus       180 ~~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~  259 (543)
T 3c4z_A          180 QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTD  259 (543)
T ss_dssp             SCCCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             ccCChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCE
Confidence            456778999999999999999998                       123457889999999999999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcC--CCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQR--RLRFSIPS  154 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~--~~~~~e~~  154 (156)
                      +|+||||++||+|..++....  ...++|..
T Consensus       260 l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~  290 (543)
T 3c4z_A          260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR  290 (543)
T ss_dssp             EEEEECCCTTCBHHHHHHTSSTTSCSCCHHH
T ss_pred             EEEEEEeccCCCHHHHHHHhhcccccccHHH
Confidence            999999999999999998642  23466543

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.44  E-value=3e-13  Score=99.05  Aligned_cols=78  Identities=32%  Similarity=0.504  Sum_probs=69.3

Q ss_pred             CCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           74 DQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      +.|.+.+.||+|+||.||+                    ...+.+.+|+.++..++||||+++++++.+...+++||||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC   88 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence            5699999999999999998                    12356889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCCCC
Q 043174          134 PGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++++|.+++...  +.+++.
T Consensus        89 ~~~~L~~~~~~~--~~~~~~  106 (277)
T 3f3z_A           89 TGGELFERVVHK--RVFRES  106 (277)
T ss_dssp             CSCBHHHHHHHH--CSCCHH
T ss_pred             CCCcHHHHHHHc--CCCCHH
Confidence            999999999875  556654

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.44  E-value=5e-14  Score=110.30  Aligned_cols=85  Identities=28%  Similarity=0.482  Sum_probs=65.6

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCC
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      ...+..++|++.+.||+|+||.||+            |           ....+.+|+.++..++||||+++++++.+.+
T Consensus       142 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~  221 (446)
T 4ejn_A          142 KHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD  221 (446)
T ss_dssp             --CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETT
T ss_pred             ccCCChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC
Confidence            3456678899999999999999997            1           1245678899999999999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      .+|+||||+++|+|.+++.+.  +.+++..
T Consensus       222 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~  249 (446)
T 4ejn_A          222 RLCFVMEYANGGELFFHLSRE--RVFSEDR  249 (446)
T ss_dssp             EEEEEECCCSSCBHHHHHHHH--SCCCHHH
T ss_pred             EEEEEEeeCCCCcHHHHHHhc--CCCCHHH
Confidence            999999999999999999876  5676643

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.43  E-value=6.9e-13  Score=100.84  Aligned_cols=73  Identities=25%  Similarity=0.402  Sum_probs=65.5

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c-------------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K-------------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR  127 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~-------------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~  127 (156)
                      .+.|++.+.||+|+||.||+            |             ..+.+.+|+.++..++||||+++++++.+.+.+|
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            35699999999999999999            1             2356889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhc
Q 043174          128 LVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~  145 (156)
                      +||||++||+|.+++.+.
T Consensus       103 lv~e~~~g~~L~~~l~~~  120 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKR  120 (351)
T ss_dssp             EEEECCSSCBHHHHHHHH
T ss_pred             EEEeCCCCCCHHHHHHHh
Confidence            999999999999888653

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.43  E-value=1.9e-13  Score=99.71  Aligned_cols=83  Identities=20%  Similarity=0.308  Sum_probs=71.5

Q ss_pred             CccCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      .+..++|++.+.||+|+||.||+                  ...+.+.+|+.++..++||||+++++++.+...+++|||
T Consensus         4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (268)
T 3sxs_A            4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE   83 (268)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             EechhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence            45678899999999999999998                  123468899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |+++|+|.++++.. ...+++.
T Consensus        84 ~~~~~~L~~~l~~~-~~~~~~~  104 (268)
T 3sxs_A           84 YISNGCLLNYLRSH-GKGLEPS  104 (268)
T ss_dssp             CCTTCBHHHHHHHH-GGGCCHH
T ss_pred             ccCCCcHHHHHHHc-CCCCCHH
Confidence            99999999999875 2335543

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.43  E-value=3.1e-13  Score=106.81  Aligned_cols=80  Identities=31%  Similarity=0.437  Sum_probs=70.5

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      .+.|.+.+.||+|+||.||+                      .....+.+|+.+++.++||||+++++++.+...+|+||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  100 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence            36699999999999999998                      12346789999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ||+++|+|.+++...  +.+++..
T Consensus       101 e~~~~~~L~~~~~~~--~~~~~~~  122 (486)
T 3mwu_A          101 ELYTGGELFDEIIKR--KRFSEHD  122 (486)
T ss_dssp             CCCCSCBHHHHHHHH--SSCCHHH
T ss_pred             EcCCCCcHHHHHHhc--CCCCHHH
Confidence            999999999999876  6676653

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.42  E-value=4.8e-13  Score=98.18  Aligned_cols=79  Identities=22%  Similarity=0.369  Sum_probs=69.7

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      .++|.+.+.||+|+||.||+                      ...+.+.+|+.++..++||||+++++++.+....+++|
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            57899999999999999998                      12345788999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||+++|+|.+++...  +.+++.
T Consensus        85 e~~~~~~l~~~~~~~--~~~~~~  105 (284)
T 3kk8_A           85 DLVTGGELFEDIVAR--EFYSEA  105 (284)
T ss_dssp             CCCCSCBHHHHHHHH--SSCCHH
T ss_pred             ecCCCCCHHHHHHhc--CCCCHH
Confidence            999999999999875  556654

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.42  E-value=1e-13  Score=106.36  Aligned_cols=85  Identities=21%  Similarity=0.298  Sum_probs=72.2

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA  122 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~  122 (156)
                      ....+..++|.+.+.||+|+||.||+                        +..+.+.+|+.++..++||||+++++++.+
T Consensus        38 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~  117 (373)
T 2qol_A           38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK  117 (373)
T ss_dssp             TSCBCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             HHhhcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee
Confidence            34456677899999999999999997                        123468899999999999999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHHHhcCCCCCCC
Q 043174          123 SHYSRLVIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       123 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      .+.+++||||+++|+|.+++++. ...+++
T Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~  146 (373)
T 2qol_A          118 SKPVMIVTEYMENGSLDSFLRKH-DAQFTV  146 (373)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTT-TTCSCH
T ss_pred             CCceEEEEeCCCCCcHHHHHHhC-CCCCCH
Confidence            99999999999999999999865 234554

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.42  E-value=3.7e-13  Score=101.52  Aligned_cols=80  Identities=23%  Similarity=0.404  Sum_probs=70.2

Q ss_pred             cCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      ..++|.+.+.||+|+||.||+                       ...+.+.+|+.++..++||||+++++++.+.+.+|+
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  118 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV  118 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence            457799999999999999998                       123467889999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +|||+++++|.++++..  +.+++.
T Consensus       119 v~e~~~~~~L~~~~~~~--~~l~~~  141 (335)
T 2owb_A          119 VLELCRRRSLLELHKRR--KALTEP  141 (335)
T ss_dssp             EECCCTTCBHHHHHHHH--CSCCHH
T ss_pred             EEecCCCCCHHHHHhcc--CCCCHH
Confidence            99999999999999875  556654

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.42  E-value=3.6e-13  Score=103.05  Aligned_cols=77  Identities=22%  Similarity=0.292  Sum_probs=68.2

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA  122 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~  122 (156)
                      ..+..++|.+.+.||+|+||.||+                          .....+.+|+.++..++||||+++++++.+
T Consensus        66 ~~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~  145 (367)
T 3l9p_A           66 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ  145 (367)
T ss_dssp             CBCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             hhcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec
Confidence            345668899999999999999997                          112357889999999999999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHHHhc
Q 043174          123 SHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       123 ~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ....++||||+++|+|.++++..
T Consensus       146 ~~~~~lv~e~~~~g~L~~~l~~~  168 (367)
T 3l9p_A          146 SLPRFILLELMAGGDLKSFLRET  168 (367)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHH
T ss_pred             CCCCEEEEEeCCCCCHHHHHHhh
Confidence            99999999999999999999875

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.41  E-value=4.7e-13  Score=98.87  Aligned_cols=80  Identities=23%  Similarity=0.404  Sum_probs=70.0

Q ss_pred             cCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      ..++|.+.+.||+|+||.||+                       ...+.+.+|+.+++.++||||+++++++.+.+.+++
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   92 (294)
T 2rku_A           13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV   92 (294)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence            457799999999999999998                       123457889999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +|||+++++|.++++..  +.+++.
T Consensus        93 v~e~~~~~~L~~~~~~~--~~~~~~  115 (294)
T 2rku_A           93 VLELCRRRSLLELHKRR--KALTEP  115 (294)
T ss_dssp             EEECCTTCBHHHHHHHH--CSCCHH
T ss_pred             EEecCCCCCHHHHHHhc--CCCCHH
Confidence            99999999999999875  556654

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.41  E-value=4.6e-13  Score=99.52  Aligned_cols=79  Identities=20%  Similarity=0.265  Sum_probs=70.2

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCCCCCCCceeEEE
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEF  120 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~  120 (156)
                      ....+..++|.+.+.||+|+||.||+                          ...+.+.+|+.++..++||||+++++++
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   95 (314)
T 2ivs_A           16 PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC   95 (314)
T ss_dssp             TTTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             cccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEE
Confidence            44566678899999999999999998                          1234678899999999999999999999


Q ss_pred             EeCCeEEEEEeccCCCCHHHHHHhc
Q 043174          121 EASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       121 ~~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      .+.+.+++||||+++|+|.+++...
T Consensus        96 ~~~~~~~lv~e~~~~~~L~~~l~~~  120 (314)
T 2ivs_A           96 SQDGPLLLIVEYAKYGSLRGFLRES  120 (314)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHT
T ss_pred             ecCCceEEEEeecCCCCHHHHHHHH
Confidence            9999999999999999999999875

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.40  E-value=3.3e-13  Score=98.41  Aligned_cols=80  Identities=25%  Similarity=0.329  Sum_probs=67.8

Q ss_pred             ccCCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      +..++|.+.+.||+|+||.||+                      ...+.+.+|+.++..++||||+++++++.+.+.+++
T Consensus         4 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (271)
T 3dtc_A            4 IDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL   83 (271)
T ss_dssp             CCTTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred             cchhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence            4568899999999999999998                      113567899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +|||+++|+|.+++..   +.+++.
T Consensus        84 v~e~~~~~~L~~~~~~---~~~~~~  105 (271)
T 3dtc_A           84 VMEFARGGPLNRVLSG---KRIPPD  105 (271)
T ss_dssp             EEECCTTEEHHHHHTS---SCCCHH
T ss_pred             EEEcCCCCCHHHHhhc---CCCCHH
Confidence            9999999999999865   456553

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.40  E-value=5.5e-13  Score=100.56  Aligned_cols=77  Identities=25%  Similarity=0.349  Sum_probs=68.4

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFE  121 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~  121 (156)
                      +.+..++|.+.+.||+|+||.||+                          ...+.+.+|+.++..+ .||||+++++++.
T Consensus        40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  119 (344)
T 1rjb_A           40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT  119 (344)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence            456678899999999999999997                          1234688999999999 8999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhc
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +.+.+++||||+++|+|.+++...
T Consensus       120 ~~~~~~lv~e~~~~g~L~~~l~~~  143 (344)
T 1rjb_A          120 LSGPIYLIFEYCCYGDLLNYLRSK  143 (344)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTT
T ss_pred             eCCccEEEEecCCCCcHHHHHhhc
Confidence            999999999999999999999875

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.40  E-value=5.6e-13  Score=97.78  Aligned_cols=78  Identities=27%  Similarity=0.433  Sum_probs=69.0

Q ss_pred             CCeEEEEEeccCCceEEEe------------c--------------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K--------------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR  127 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~--------------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~  127 (156)
                      ++|.+.+.||+|+||.||+            |              ..+.+.+|+.++..++||||+++++++.+...++
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            5699999999999999999            1              1456889999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++|||+++++|.+++.+.  +.+++.
T Consensus        85 lv~e~~~~~~L~~~l~~~--~~~~~~  108 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEK--ESLTED  108 (283)
T ss_dssp             EEEECCCSCBHHHHHHHH--SSCCHH
T ss_pred             EEEeecCCCcHHHHHHhc--CCCCHH
Confidence            999999999999999875  556654

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.40  E-value=4.1e-13  Score=97.65  Aligned_cols=84  Identities=23%  Similarity=0.255  Sum_probs=71.9

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      +.+..++|++.+.||+|+||.||+                  ...+.+.+|+.++..++||||+++++++.+.+.++++|
T Consensus         3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (267)
T 3t9t_A            3 WVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT   82 (267)
T ss_dssp             CBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             eEEchhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEE
Confidence            345667899999999999999998                  12356889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||+++|+|.+++... .+.+++.
T Consensus        83 e~~~~~~L~~~~~~~-~~~~~~~  104 (267)
T 3t9t_A           83 EFMEHGCLSDYLRTQ-RGLFAAE  104 (267)
T ss_dssp             CCCTTCBHHHHHHHT-TTCCCHH
T ss_pred             eCCCCCcHHHHHhhC-cccCCHH
Confidence            999999999999875 2445543

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.40  E-value=6.5e-13  Score=99.09  Aligned_cols=81  Identities=23%  Similarity=0.273  Sum_probs=69.5

Q ss_pred             ccCCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEE
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR  127 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~  127 (156)
                      ...++|.+.+.||+|+||.||+            |           ..+.+.+|+.++..++||||+++++++.+.+.+|
T Consensus        31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~  110 (309)
T 2h34_A           31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY  110 (309)
T ss_dssp             ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred             cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence            4468999999999999999999            1           1255788999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++|||+++++|.+++...  +.+++.
T Consensus       111 lv~e~~~~~~L~~~l~~~--~~~~~~  134 (309)
T 2h34_A          111 VDMRLINGVDLAAMLRRQ--GPLAPP  134 (309)
T ss_dssp             EEEECCCCEEHHHHHHHH--CSCCHH
T ss_pred             EEEEecCCCCHHHHHHhc--CCCCHH
Confidence            999999999999999875  556654

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.40  E-value=7.2e-13  Score=99.02  Aligned_cols=73  Identities=23%  Similarity=0.397  Sum_probs=62.7

Q ss_pred             CCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC-------
Q 043174           73 LDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH-------  124 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~-------  124 (156)
                      .++|++.+.||+|+||.||+                     ...+.+.+|+.++..++||||+++++++.+..       
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            36799999999999999998                     12356889999999999999999999886543       


Q ss_pred             --------------------------------------------------eEEEEEeccCCCCHHHHHHhc
Q 043174          125 --------------------------------------------------YSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       125 --------------------------------------------------~~~lv~E~~~~g~L~~~l~~~  145 (156)
                                                                        .++++|||+++|+|.+++++.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~  155 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRR  155 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTC
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcc
Confidence                                                              389999999999999999875

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.40  E-value=8.1e-13  Score=97.44  Aligned_cols=72  Identities=38%  Similarity=0.581  Sum_probs=65.1

Q ss_pred             CCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           73 LDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      .+.|.+.+.||+|+||.||+                     ...+.+.+|+.++..++||||+++++++.+...+++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  100 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME  100 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence            36799999999999999998                     123568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHh
Q 043174          132 YCPGGDLLTVSQR  144 (156)
Q Consensus       132 ~~~~g~L~~~l~~  144 (156)
                      |+++|+|.+++..
T Consensus       101 ~~~~~~L~~~l~~  113 (285)
T 3is5_A          101 TCEGGELLERIVS  113 (285)
T ss_dssp             CCSCCBHHHHHHH
T ss_pred             eCCCCcHHHHHHh
Confidence            9999999999864

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.40  E-value=9e-13  Score=98.67  Aligned_cols=80  Identities=25%  Similarity=0.333  Sum_probs=66.3

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe--C
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA--S  123 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~--~  123 (156)
                      +....|++.+.||+|+||.||+                         ...+.+.+|+.++..++||||+++++++.+  .
T Consensus        28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  107 (318)
T 3lxp_A           28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGA  107 (318)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTT
T ss_pred             ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCC
Confidence            4444459999999999999954                         123458899999999999999999999988  4


Q ss_pred             CeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ..+++||||+++|+|.+++.+.   .+++.
T Consensus       108 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~  134 (318)
T 3lxp_A          108 ASLQLVMEYVPLGSLRDYLPRH---SIGLA  134 (318)
T ss_dssp             TEEEEEECCCTTCBHHHHGGGS---CCCHH
T ss_pred             ceEEEEEecccCCcHHHHHhhC---CCCHH
Confidence            6899999999999999999874   35543

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.39  E-value=7.8e-13  Score=98.36  Aligned_cols=79  Identities=25%  Similarity=0.393  Sum_probs=68.4

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      .++|++.+.||+|+||.||+            |          ..+.+.+|+.++..++||||+++++++.+.+.+++||
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF   81 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence            47899999999999999998            1          1345778999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||+++++|..+++..  +.+++.
T Consensus        82 e~~~~~~l~~~~~~~--~~~~~~  102 (311)
T 4agu_A           82 EYCDHTVLHELDRYQ--RGVPEH  102 (311)
T ss_dssp             ECCSEEHHHHHHHTS--SCCCHH
T ss_pred             EeCCCchHHHHHhhh--cCCCHH
Confidence            999999999988764  556654

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.39  E-value=4e-13  Score=100.64  Aligned_cols=79  Identities=25%  Similarity=0.339  Sum_probs=69.1

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c--------------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K--------------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~--------------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      .+.|.+.+.||+|+||.||+            |              ..+.+.+|+.++..++||||+++++++.+...+
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            46699999999999999999            1              134588999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++||||+++|+|.+++...  +.+++.
T Consensus        91 ~lv~e~~~~~~L~~~l~~~--~~~~~~  115 (321)
T 2a2a_A           91 VLILELVSGGELFDFLAQK--ESLSEE  115 (321)
T ss_dssp             EEEECCCCSCBHHHHHHTC--SCEEHH
T ss_pred             EEEEEcCCCCcHHHHHHhc--CCCCHH
Confidence            9999999999999999874  555543

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.39  E-value=5.7e-13  Score=105.15  Aligned_cols=81  Identities=33%  Similarity=0.442  Sum_probs=70.7

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      ..+.|++.+.||+|+||.||+            |           ..+.+.+|+.++..++||||+++++++.+.+.+|+
T Consensus        24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  103 (484)
T 3nyv_A           24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL  103 (484)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            346799999999999999998            1           23458899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ||||+.+|+|.+++...  +.+++..
T Consensus       104 v~e~~~~~~L~~~~~~~--~~~~~~~  127 (484)
T 3nyv_A          104 VGEVYTGGELFDEIISR--KRFSEVD  127 (484)
T ss_dssp             EECCCCSCBHHHHHHTC--SCCBHHH
T ss_pred             EEecCCCCCHHHHHHhc--CCCCHHH
Confidence            99999999999999875  5666543

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.39  E-value=6.8e-13  Score=100.09  Aligned_cols=86  Identities=19%  Similarity=0.183  Sum_probs=72.5

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEE
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFE  121 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~  121 (156)
                      ....+...+|.+.+.||+|+||.||+                         .....+.+|+.++..++||||+++++++.
T Consensus        37 ~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  116 (333)
T 1mqb_A           37 FTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS  116 (333)
T ss_dssp             -CCBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             ccccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe
Confidence            34566778999999999999999998                         12235788999999999999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +.+.+++||||+++|+|.+++... .+.+++.
T Consensus       117 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~  147 (333)
T 1mqb_A          117 KYKPMMIITEYMENGALDKFLREK-DGEFSVL  147 (333)
T ss_dssp             SSSSEEEEEECCTTEEHHHHHHHT-TTCSCHH
T ss_pred             cCCCcEEEEeCCCCCcHHHHHHhC-CCCCCHH
Confidence            999999999999999999999864 3445543

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.39  E-value=6.6e-13  Score=97.26  Aligned_cols=80  Identities=33%  Similarity=0.492  Sum_probs=69.4

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      .++|.+.+.||+|+||.||+            |           ..+.+.+|+.++..++||||+++++++.+.+.++++
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            46799999999999999999            1           125678999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCC
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |||+++|+|.+++... .+.+++.
T Consensus        90 ~e~~~~~~L~~~l~~~-~~~~~~~  112 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNR-VKPFSEN  112 (278)
T ss_dssp             EECCTTEEHHHHHHTC-SSCCCHH
T ss_pred             EecCCCCcHHHHHhhc-cCCCCHH
Confidence            9999999999999864 2445543

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.39  E-value=1e-12  Score=99.03  Aligned_cols=70  Identities=31%  Similarity=0.595  Sum_probs=63.9

Q ss_pred             CCeEEEEEeccCCceEEEe------------c-------------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K-------------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~-------------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      ++|.+.+.||+|+||.||+            |             ..+.+.+|+.++..++||||+++++++.+.+.+++
T Consensus        26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  105 (345)
T 3hko_A           26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICL  105 (345)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEE
Confidence            5599999999999999998            1             12467889999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHH
Q 043174          129 VIEYCPGGDLLTVSQ  143 (156)
Q Consensus       129 v~E~~~~g~L~~~l~  143 (156)
                      ||||+++|+|.+++.
T Consensus       106 v~e~~~gg~L~~~l~  120 (345)
T 3hko_A          106 VMELCHGGHLLDKLN  120 (345)
T ss_dssp             EEECCCSCBHHHHEE
T ss_pred             EEeCCCCCcHHHHHH
Confidence            999999999999986

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.39  E-value=3.7e-13  Score=110.58  Aligned_cols=85  Identities=31%  Similarity=0.503  Sum_probs=71.3

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCC
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASH  124 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~  124 (156)
                      ..+..++|.+++.||+|+||.||+                       ...+.+..|+.++..+ +||+|+.+++++++.+
T Consensus       336 ~~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~  415 (674)
T 3pfq_A          336 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD  415 (674)
T ss_dssp             ----CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS
T ss_pred             ccccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC
Confidence            356678999999999999999998                       1234578899999887 7999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      .+|+||||++||+|..+|++.  +.|+|..+
T Consensus       416 ~~~lV~E~~~gg~L~~~l~~~--~~~~~~~~  444 (674)
T 3pfq_A          416 RLYFVMEYVNGGDLMYHIQQV--GRFKEPHA  444 (674)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH--SSCCHHHH
T ss_pred             EEEEEEeCcCCCcHHHHHHhc--CCCCHHHH
Confidence            999999999999999999986  67776543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.39  E-value=2.9e-13  Score=106.30  Aligned_cols=84  Identities=21%  Similarity=0.315  Sum_probs=70.0

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEE
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      .+.+..++|.+.+.||+|+||.||+                  ...+.+.+|+.+|+.++||||+++++++.+ +.+++|
T Consensus       178 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv  256 (452)
T 1fmk_A          178 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV  256 (452)
T ss_dssp             CSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred             ccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEE
Confidence            3456678899999999999999998                  123568999999999999999999998865 779999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCC
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      |||+++|+|.++++......+++
T Consensus       257 ~e~~~~gsL~~~l~~~~~~~~~~  279 (452)
T 1fmk_A          257 TEYMSKGSLLDFLKGETGKYLRL  279 (452)
T ss_dssp             ECCCTTCBHHHHHSHHHHTTCCH
T ss_pred             ehhhcCCCHHHHHHhcCCCCCCH
Confidence            99999999999997542234554

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.38  E-value=7.7e-13  Score=101.59  Aligned_cols=77  Identities=23%  Similarity=0.338  Sum_probs=68.6

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe----------------------------chhhhHHHHHHHHHhC-CCCCCCceeEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI----------------------------KKRNRVHIEKEILKML-DHPFLPSLFAE  119 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~----------------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~  119 (156)
                      +.+..++|.+.+.||+|+||.||+                            +..+.+.+|+.++..+ +||||++++++
T Consensus        64 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~  143 (382)
T 3tt0_A           64 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA  143 (382)
T ss_dssp             TBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheee
Confidence            355668899999999999999996                            1224588999999999 99999999999


Q ss_pred             EEeCCeEEEEEeccCCCCHHHHHHhc
Q 043174          120 FEASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       120 ~~~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +.+.+.+++||||+++|+|.+++...
T Consensus       144 ~~~~~~~~lv~e~~~~g~L~~~l~~~  169 (382)
T 3tt0_A          144 CTQDGPLYVIVEYASKGNLREYLQAR  169 (382)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHT
T ss_pred             eccCCceEEEEEecCCCcHHHHHHHh
Confidence            99999999999999999999999875

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.38  E-value=2.7e-13  Score=106.50  Aligned_cols=77  Identities=21%  Similarity=0.333  Sum_probs=67.7

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEE
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      .+.+..++|.+.+.||+|+||.||+                  ...+.+.+|+.+|+.++||||+++++++. .+.+++|
T Consensus       182 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv  260 (454)
T 1qcf_A          182 AWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII  260 (454)
T ss_dssp             CSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred             ceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence            3456678899999999999999999                  13457899999999999999999999886 6679999


Q ss_pred             EeccCCCCHHHHHHhc
Q 043174          130 IEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~  145 (156)
                      |||+++|+|.++|+..
T Consensus       261 ~e~~~~g~L~~~l~~~  276 (454)
T 1qcf_A          261 TEFMAKGSLLDFLKSD  276 (454)
T ss_dssp             ECCCTTCBHHHHHHSH
T ss_pred             EeecCCCcHHHHHHhc
Confidence            9999999999999854

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.38  E-value=1.2e-12  Score=96.80  Aligned_cols=83  Identities=19%  Similarity=0.284  Sum_probs=68.3

Q ss_pred             CccCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC-
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS-  123 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~-  123 (156)
                      .+....|++.+.||+|+||.||+                         ...+.+.+|+.++..++||||+++++++.+. 
T Consensus        17 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   96 (302)
T 4e5w_A           17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG   96 (302)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--
T ss_pred             hhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC
Confidence            34456699999999999999986                         1235688999999999999999999999876 


Q ss_pred             -CeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          124 -HYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       124 -~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                       ..++++|||+++|+|.+++... ...+++.
T Consensus        97 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~  126 (302)
T 4e5w_A           97 GNGIKLIMEFLPSGSLKEYLPKN-KNKINLK  126 (302)
T ss_dssp             -CCEEEEEECCTTCBHHHHHHHH-TTTCCHH
T ss_pred             CceEEEEEEeCCCCcHHHHHHhc-cccCCHH
Confidence             6799999999999999999665 2445543

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.38  E-value=8.2e-13  Score=99.40  Aligned_cols=77  Identities=18%  Similarity=0.285  Sum_probs=68.9

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA  122 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~  122 (156)
                      ..+..++|.+.+.||+|+||.||+                          ...+.+.+|+.++..++||||+++++++.+
T Consensus        42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  121 (343)
T 1luf_A           42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV  121 (343)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence            456678999999999999999998                          113457899999999999999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHHHhc
Q 043174          123 SHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       123 ~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      .+.+++||||+++|+|.++++..
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~  144 (343)
T 1luf_A          122 GKPMCLLFEYMAYGDLNEFLRSM  144 (343)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHT
T ss_pred             CCceEEEEecCCCCcHHHHHHHh
Confidence            99999999999999999999874

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.38  E-value=6.1e-13  Score=97.75  Aligned_cols=83  Identities=19%  Similarity=0.361  Sum_probs=68.9

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS  123 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~  123 (156)
                      ...+..++|++.+.||+|+||.||+                        ...+.+.+|+.++..++||||+++++++ .+
T Consensus         9 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~   87 (281)
T 1mp8_A            9 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TE   87 (281)
T ss_dssp             CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CS
T ss_pred             ceEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-cc
Confidence            3456678899999999999999997                        1234578999999999999999999987 45


Q ss_pred             CeEEEEEeccCCCCHHHHHHhcCCCCCCC
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      +.+++||||+++|+|.+++... ...+++
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~  115 (281)
T 1mp8_A           88 NPVWIIMELCTLGELRSFLQVR-KYSLDL  115 (281)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHT-TTTSCH
T ss_pred             CccEEEEecCCCCCHHHHHHhc-CCCCCH
Confidence            6789999999999999999875 234554

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.38  E-value=1.3e-12  Score=97.08  Aligned_cols=79  Identities=23%  Similarity=0.381  Sum_probs=68.1

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c--------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K--------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~--------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      .++|.+.+.||+|+||.||+            |        ..+.+.+|+.++..++||||+++++++.+...++++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            35699999999999999998            1        224578999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +++|+|.+++...  +.+++.
T Consensus        88 ~~~~~L~~~l~~~--~~~~~~  106 (304)
T 2jam_A           88 VSGGELFDRILER--GVYTEK  106 (304)
T ss_dssp             CCSCBHHHHHHHH--SCCCHH
T ss_pred             CCCccHHHHHHHc--CCCCHH
Confidence            9999999999875  556654

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.38  E-value=1.4e-12  Score=97.89  Aligned_cols=76  Identities=26%  Similarity=0.413  Sum_probs=67.4

Q ss_pred             CccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCe
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHY  125 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~  125 (156)
                      .+..++|++.+.||+|+||.||+                       ...+.+.+|+.++..+ +||||+++++++.+.+.
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  100 (327)
T 1fvr_A           21 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY  100 (327)
T ss_dssp             BCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTE
T ss_pred             cccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCc
Confidence            45568899999999999999998                       1234588899999999 89999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhc
Q 043174          126 SRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +++||||+++|+|.+++...
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~  120 (327)
T 1fvr_A          101 LYLAIEYAPHGNLLDFLRKS  120 (327)
T ss_dssp             EEEEECCCTTCBHHHHHHTT
T ss_pred             eEEEEecCCCCCHHHHHHhc
Confidence            99999999999999999874

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.38  E-value=7.2e-13  Score=97.89  Aligned_cols=80  Identities=19%  Similarity=0.280  Sum_probs=66.9

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      +++|++.+.||+|+||.||+                      ...+.+.+|+.++..++||||+++++++.+.+.+++||
T Consensus         1 l~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   80 (292)
T 3o0g_A            1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF   80 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CCCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence            36899999999999999999                      12256789999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ||+++ +|.+++... .+.+++..
T Consensus        81 e~~~~-~l~~~~~~~-~~~l~~~~  102 (292)
T 3o0g_A           81 EFCDQ-DLKKYFDSC-NGDLDPEI  102 (292)
T ss_dssp             ECCSE-EHHHHHHHT-TTCCCHHH
T ss_pred             ecCCC-CHHHHHHhC-CCCCCHHH
Confidence            99985 777776653 35666543

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.38  E-value=3.1e-13  Score=99.87  Aligned_cols=83  Identities=25%  Similarity=0.331  Sum_probs=68.5

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe--
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA--  122 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~--  122 (156)
                      ..+..++|++.+.||+|+||.||+                        ...+.+.+|+.++..++||||+++++++..  
T Consensus         5 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   84 (295)
T 3ugc_A            5 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG   84 (295)
T ss_dssp             -CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH
T ss_pred             CcCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence            456678899999999999999986                        123568899999999999999999998855  


Q ss_pred             CCeEEEEEeccCCCCHHHHHHhcCCCCCCC
Q 043174          123 SHYSRLVIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       123 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      ...+++||||+++|+|.+++... ...+++
T Consensus        85 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~  113 (295)
T 3ugc_A           85 RRNLKLIMEYLPYGSLRDYLQKH-KERIDH  113 (295)
T ss_dssp             HTSCEEEEECCTTCBHHHHHHHC-GGGCCH
T ss_pred             CCceEEEEEeCCCCCHHHHHHhc-ccccCH
Confidence            45699999999999999999875 223544

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.38  E-value=1.1e-12  Score=97.76  Aligned_cols=79  Identities=30%  Similarity=0.338  Sum_probs=68.0

Q ss_pred             CCCeEEE-EEeccCCceEEEe--------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEE
Q 043174           73 LDQFQLF-RRLGSGIIRSVYI--------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        73 ~~~~~~~-~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      .+.|.+. +.||+|+||.||+                    ...+.+.+|+.++..+ +||||+++++++.+.+.+|+||
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~   90 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF   90 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence            4678885 7899999999999                    1245688999999985 7999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||+++|+|.+++...  +.+++.
T Consensus        91 e~~~~~~L~~~l~~~--~~~~~~  111 (316)
T 2ac3_A           91 EKMRGGSILSHIHKR--RHFNEL  111 (316)
T ss_dssp             ECCTTCBHHHHHHHH--SSCCHH
T ss_pred             EcCCCCcHHHHHhcc--CCCCHH
Confidence            999999999999875  556654

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.38  E-value=9e-13  Score=98.96  Aligned_cols=77  Identities=23%  Similarity=0.357  Sum_probs=68.6

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFE  121 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~  121 (156)
                      ..+..++|.+.+.||+|+||.||+                          ...+.+.+|+.++..+ +||||+++++++.
T Consensus        41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~  120 (333)
T 2i1m_A           41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT  120 (333)
T ss_dssp             GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence            356678999999999999999998                          1234588999999999 8999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhc
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +.+.+++||||+++|+|.+++...
T Consensus       121 ~~~~~~lv~e~~~~g~L~~~l~~~  144 (333)
T 2i1m_A          121 HGGPVLVITEYCCYGDLLNFLRRK  144 (333)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHH
T ss_pred             cCCceEEEEecCCCCcHHHHHHHh
Confidence            999999999999999999999764

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.38  E-value=5.8e-13  Score=99.98  Aligned_cols=84  Identities=15%  Similarity=0.089  Sum_probs=67.8

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe----------c-------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCC----e
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI----------K-------KRNRVHIEKEILKMLDHPFLPSLFAEFEASH----Y  125 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~----------~-------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~----~  125 (156)
                      ....+..++|++.+.||+|+||.||+          |       ......+|+.++..++||||+++++++.+..    .
T Consensus        17 ~n~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~   96 (322)
T 3soc_A           17 ENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVD   96 (322)
T ss_dssp             CCEEETTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cccccchhhchhhheecccCceEEEEEEECCCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCce
Confidence            33346678899999999999999999          1       1234566888899999999999999998744    4


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +++||||+++|+|.++++..   .+++.
T Consensus        97 ~~lv~e~~~~g~L~~~l~~~---~~~~~  121 (322)
T 3soc_A           97 LWLITAFHEKGSLSDFLKAN---VVSWN  121 (322)
T ss_dssp             EEEEEECCTTCBHHHHHHHC---CBCHH
T ss_pred             EEEEEecCCCCCHHHHHHhc---CCCHH
Confidence            79999999999999999873   45543

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.37  E-value=7.8e-13  Score=99.56  Aligned_cols=79  Identities=24%  Similarity=0.372  Sum_probs=67.5

Q ss_pred             CCeEEE---EEeccCCceEEEe-----------------chhhhHHHHHHHHHhCC-CCCCCceeEEEEeCCeEEEEEec
Q 043174           74 DQFQLF---RRLGSGIIRSVYI-----------------KKRNRVHIEKEILKMLD-HPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        74 ~~~~~~---~~lG~G~~g~V~~-----------------~~~~~~~~E~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      ++|.+.   +.||+|+||.||+                 .....+.+|+.++..+. ||||+++++++.+...+|+||||
T Consensus         8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~   87 (325)
T 3kn6_A            8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMEL   87 (325)
T ss_dssp             HHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEc
Confidence            345654   6899999999999                 22356788999999996 99999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      +++|+|.+++.+.  +.+++..
T Consensus        88 ~~~~~L~~~l~~~--~~~~~~~  107 (325)
T 3kn6_A           88 LNGGELFERIKKK--KHFSETE  107 (325)
T ss_dssp             CCSCBHHHHHHHC--SCCCHHH
T ss_pred             cCCCcHHHHHHhc--CCCCHHH
Confidence            9999999999885  6677654

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.37  E-value=8.8e-13  Score=97.59  Aligned_cols=81  Identities=25%  Similarity=0.489  Sum_probs=69.2

Q ss_pred             cCCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      ..+.|++.+.||+|+||.||+                    ...+.+.+|+.++..++||||+++++++.+.+.+++|||
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            457799999999999999999                    234568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |+++|+|.+++... .+.+++.
T Consensus        97 ~~~~~~l~~~~~~~-~~~~~~~  117 (302)
T 2j7t_A           97 FCPGGAVDAIMLEL-DRGLTEP  117 (302)
T ss_dssp             CCTTEEHHHHHHHH-TSCCCHH
T ss_pred             eCCCCcHHHHHHhh-ccCCCHH
Confidence            99999999998764 2446543

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.37  E-value=2.9e-13  Score=108.43  Aligned_cols=84  Identities=21%  Similarity=0.315  Sum_probs=70.0

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEE
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      .+.+..++|++.+.||+|+||.||+                  ...+.+.+|+.+|+.++|+||+++++++.+ +.+|+|
T Consensus       261 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv  339 (535)
T 2h8h_A          261 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV  339 (535)
T ss_dssp             CSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred             ceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEe
Confidence            3456678899999999999999999                  123568999999999999999999998865 779999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCC
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      |||+++|+|.++|+......+++
T Consensus       340 ~e~~~~gsL~~~l~~~~~~~l~~  362 (535)
T 2h8h_A          340 TEYMSKGSLLDFLKGETGKYLRL  362 (535)
T ss_dssp             ECCCTTEEHHHHHSHHHHTTCCH
T ss_pred             eehhcCCcHHHHHhhcCCCCCCH
Confidence            99999999999997542234554

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.37  E-value=1.7e-12  Score=95.76  Aligned_cols=80  Identities=28%  Similarity=0.388  Sum_probs=67.0

Q ss_pred             cCCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe----CCe
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA----SHY  125 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~----~~~  125 (156)
                      ....|.+.+.||+|+||.||+                      ...+.+.+|+.++..++||||+++++++..    ...
T Consensus        24 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~  103 (290)
T 1t4h_A           24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC  103 (290)
T ss_dssp             TSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEE
T ss_pred             CceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCce
Confidence            345589999999999999998                      123457899999999999999999998876    456


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +++||||+++|+|.+++++.  +.+++.
T Consensus       104 ~~lv~e~~~~~~L~~~l~~~--~~~~~~  129 (290)
T 1t4h_A          104 IVLVTELMTSGTLKTYLKRF--KVMKIK  129 (290)
T ss_dssp             EEEEEECCCSCBHHHHHHHH--SSCCHH
T ss_pred             EEEEEEecCCCCHHHHHHHc--cCCCHH
Confidence            99999999999999999875  555543

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.37  E-value=2.2e-12  Score=96.43  Aligned_cols=75  Identities=31%  Similarity=0.429  Sum_probs=65.5

Q ss_pred             ccCCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC--eEE
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH--YSR  127 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~--~~~  127 (156)
                      ...+.|.+.+.||+|+||.||+                     ...+.+.+|+.++..++||||+++++++....  .++
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   85 (319)
T 4euu_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV   85 (319)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred             CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEE
Confidence            3457799999999999999999                     12345779999999999999999999998755  789


Q ss_pred             EEEeccCCCCHHHHHHhc
Q 043174          128 LVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~  145 (156)
                      +||||+++|+|.++++..
T Consensus        86 lv~e~~~~~~L~~~l~~~  103 (319)
T 4euu_A           86 LIMEFCPCGSLYTVLEEP  103 (319)
T ss_dssp             EEEECCTTCBHHHHHHSG
T ss_pred             EEEeCCCCCCHHHHHHHh
Confidence            999999999999999875

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.36  E-value=7.6e-13  Score=98.93  Aligned_cols=84  Identities=24%  Similarity=0.302  Sum_probs=70.3

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR  127 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~  127 (156)
                      .+-..++|++.+.||+|+||.||+                     .....+.+|+.++..++||||+++++++.+...++
T Consensus        16 ~q~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   95 (311)
T 3niz_A           16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLT   95 (311)
T ss_dssp             EECSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEE
T ss_pred             ecchHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEE
Confidence            344578899999999999999998                     11245789999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      +||||++ |+|.+++... ...+++..
T Consensus        96 lv~e~~~-~~l~~~~~~~-~~~~~~~~  120 (311)
T 3niz_A           96 LVFEFME-KDLKKVLDEN-KTGLQDSQ  120 (311)
T ss_dssp             EEEECCS-EEHHHHHHTC-TTCCCHHH
T ss_pred             EEEcCCC-CCHHHHHHhc-cCCCCHHH
Confidence            9999998 4899988765 34466543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.36  E-value=5.9e-13  Score=100.18  Aligned_cols=81  Identities=25%  Similarity=0.368  Sum_probs=67.3

Q ss_pred             CccCCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEE
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR  127 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~  127 (156)
                      ....++|.+.+.||+|+||.||+            |          ..+.+.+|+.++..++||||+++++++.+...++
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (329)
T 3gbz_A           30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH  109 (329)
T ss_dssp             --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred             ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence            34467899999999999999999            1          1234678999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +||||++ |+|.+++...  ..+++.
T Consensus       110 lv~e~~~-~~L~~~~~~~--~~~~~~  132 (329)
T 3gbz_A          110 LIFEYAE-NDLKKYMDKN--PDVSMR  132 (329)
T ss_dssp             EEEECCS-EEHHHHHHHC--TTCCHH
T ss_pred             EEEecCC-CCHHHHHhhc--CCCCHH
Confidence            9999998 5999999885  556654

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.36  E-value=2.1e-13  Score=101.71  Aligned_cols=81  Identities=23%  Similarity=0.269  Sum_probs=67.5

Q ss_pred             ccCCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCC---
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASH---  124 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~---  124 (156)
                      ...++|++.+.||+|+||.||+            |           ....+.+|+.++..++||||+++++++....   
T Consensus         9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   88 (311)
T 3ork_A            9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAG   88 (311)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTE
T ss_pred             eecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCC
Confidence            3468899999999999999998            1           1235788999999999999999999887644   


Q ss_pred             -eEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          125 -YSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       125 -~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                       .+|+||||++||+|.++++..  +.+++.
T Consensus        89 ~~~~lv~e~~~g~~L~~~l~~~--~~~~~~  116 (311)
T 3ork_A           89 PLPYIVMEYVDGVTLRDIVHTE--GPMTPK  116 (311)
T ss_dssp             EEEEEEEECCCEEEHHHHHHHH--CSCCHH
T ss_pred             cccEEEEecCCCCCHHHHHHhc--CCCCHH
Confidence             359999999999999999875  566654

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.36  E-value=1.7e-12  Score=96.60  Aligned_cols=83  Identities=19%  Similarity=0.374  Sum_probs=64.6

Q ss_pred             CccCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      ....+.|.+.+.||+|+||.||+                  ...+.+.+|+.++..++||||+++++++.+.+.+++|||
T Consensus        25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            34467899999999999999999                  123568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |+++|+|.+++... ...+++.
T Consensus       105 ~~~~~~L~~~~~~~-~~~~~~~  125 (314)
T 3com_A          105 YCGAGSVSDIIRLR-NKTLTED  125 (314)
T ss_dssp             CCTTEEHHHHHHHH-TCCCCHH
T ss_pred             cCCCCCHHHHHHhc-CCCCCHH
Confidence            99999999999743 2456543

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.36  E-value=1e-12  Score=97.57  Aligned_cols=77  Identities=23%  Similarity=0.370  Sum_probs=68.7

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFE  121 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~  121 (156)
                      ..+..++|.+.+.||+|+||.||+                          ...+.+.+|+.++..+ +||||+++++++.
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   97 (313)
T 1t46_A           18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT   97 (313)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence            355668899999999999999986                          1235688999999999 9999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhc
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +.+..++||||+++|+|.+++...
T Consensus        98 ~~~~~~lv~e~~~~~~L~~~l~~~  121 (313)
T 1t46_A           98 IGGPTLVITEYCCYGDLLNFLRRK  121 (313)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHT
T ss_pred             cCCCcEEEEecCCCCCHHHHHHhc
Confidence            999999999999999999999875

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.36  E-value=7.9e-13  Score=100.65  Aligned_cols=83  Identities=29%  Similarity=0.631  Sum_probs=71.0

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe---------------------------chhhhHHHHHHHHHhC-CCCCCCceeEEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI---------------------------KKRNRVHIEKEILKML-DHPFLPSLFAEF  120 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~---------------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~  120 (156)
                      ..+..++|.+.+.||+|+||.||+                           ...+.+.+|+.++..+ +||||+++++++
T Consensus        49 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  128 (355)
T 1vzo_A           49 EKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF  128 (355)
T ss_dssp             CCCCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEE
T ss_pred             ccccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEE
Confidence            345568899999999999999996                           1124567899999999 799999999999


Q ss_pred             EeCCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          121 EASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       121 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      .+...+++||||+++|+|.+++...  +.+++.
T Consensus       129 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~  159 (355)
T 1vzo_A          129 QTETKLHLILDYINGGELFTHLSQR--ERFTEH  159 (355)
T ss_dssp             EETTEEEEEECCCCSCBHHHHHHHH--SCCCHH
T ss_pred             eeCceEEEEeecCCCCCHHHHHHHc--CCCCHH
Confidence            9999999999999999999999875  556654

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.36  E-value=8.1e-13  Score=97.55  Aligned_cols=86  Identities=17%  Similarity=0.289  Sum_probs=69.1

Q ss_pred             hhccCCccCCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           65 QQEHGQVGLDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        65 ~~~~~~~~~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      ....+.+..++|.+.+.||+|+||.||+                   ...+.+.+|+.+++.++||||++++++. ....
T Consensus        15 ~~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~   93 (289)
T 3og7_A           15 AADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQ   93 (289)
T ss_dssp             ---CCBCCTTSCEEEEEEEECSSEEEEEEESSSEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSS
T ss_pred             CCCCCccCccceeeeeEecCCCCeEEEEEEEcCceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCc
Confidence            4566678889999999999999999998                   2235688999999999999999999954 5667


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      +++||||+++|+|.+++... ...+++
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~-~~~~~~  119 (289)
T 3og7_A           94 LAIVTQWCEGSSLYHHLHAS-ETKFEM  119 (289)
T ss_dssp             CEEEEECCCEEEHHHHHTTC----CCH
T ss_pred             cEEEEEecCCCcHHHHHhhc-cCCCCH
Confidence            89999999999999999754 244554

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.36  E-value=7.2e-13  Score=100.36  Aligned_cols=77  Identities=21%  Similarity=0.285  Sum_probs=66.8

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFE  121 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~  121 (156)
                      +.+..++|.+.+.||+|+||.||+                          ...+.+.+|+.++..+ +||||+++++++.
T Consensus        17 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~   96 (359)
T 3vhe_A           17 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT   96 (359)
T ss_dssp             HBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeee
Confidence            356678899999999999999997                          1224588999999999 7999999999988


Q ss_pred             eCC-eEEEEEeccCCCCHHHHHHhc
Q 043174          122 ASH-YSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       122 ~~~-~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +.+ .++++|||+++|+|.++++..
T Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~  121 (359)
T 3vhe_A           97 KPGGPLMVIVEFCKFGNLSTYLRSK  121 (359)
T ss_dssp             STTSCCEEEEECCTTEEHHHHHHTT
T ss_pred             cCCCceEEEEEecCCCcHHHHHHhc
Confidence            754 599999999999999999875

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.36  E-value=6.1e-13  Score=103.49  Aligned_cols=79  Identities=28%  Similarity=0.414  Sum_probs=66.2

Q ss_pred             CCCeEEEEEeccCCceEEEe------------ch----------------hhhHHHHHHHHHhCCCCCCCceeEEEEeCC
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------KK----------------RNRVHIEKEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~~----------------~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      .++|.+.+.||+|+||.||+            |.                ...+.+|+.+|..++||||+++++++. .+
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~  212 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AE  212 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SS
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cC
Confidence            47899999999999999998            11                124789999999999999999999875 55


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      .+|+||||+++|+|.+++...  +.+++..
T Consensus       213 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~  240 (419)
T 3i6u_A          213 DYYIVLELMEGGELFDKVVGN--KRLKEAT  240 (419)
T ss_dssp             EEEEEEECCTTCBGGGGTSSS--CCCCHHH
T ss_pred             ceEEEEEcCCCCcHHHHHhcc--CCCCHHH
Confidence            689999999999999998765  5666543

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.36  E-value=1.5e-12  Score=98.04  Aligned_cols=78  Identities=22%  Similarity=0.330  Sum_probs=68.7

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe----------------------------chhhhHHHHHHHHHhC-CCCCCCceeE
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI----------------------------KKRNRVHIEKEILKML-DHPFLPSLFA  118 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~----------------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~  118 (156)
                      .+.+..++|.+.+.||+|+||.||+                            +..+.+.+|+.++..+ +||||+++++
T Consensus        29 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~  108 (334)
T 2pvf_A           29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLG  108 (334)
T ss_dssp             TTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEE
Confidence            3455668999999999999999996                            1234578999999999 8999999999


Q ss_pred             EEEeCCeEEEEEeccCCCCHHHHHHhc
Q 043174          119 EFEASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       119 ~~~~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ++.+.+.+++||||+++|+|.+++...
T Consensus       109 ~~~~~~~~~lv~e~~~~~~L~~~l~~~  135 (334)
T 2pvf_A          109 ACTQDGPLYVIVEYASKGNLREYLRAR  135 (334)
T ss_dssp             EECSSSCCEEEEECCTTCBHHHHHHTT
T ss_pred             EEccCCceEEEEECCCCCcHHHHHHHh
Confidence            999999999999999999999999875

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.35  E-value=1.4e-12  Score=97.40  Aligned_cols=78  Identities=19%  Similarity=0.298  Sum_probs=68.0

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEE
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFE  121 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~  121 (156)
                      .+.+..++|.+.+.||+|+||.||+                          .....+.+|+.++..++||||+++++++.
T Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   98 (322)
T 1p4o_A           19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS   98 (322)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred             hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence            3455567899999999999999996                          12235788999999999999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhc
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +.+..++||||+++|+|.++++..
T Consensus        99 ~~~~~~lv~e~~~~~~L~~~l~~~  122 (322)
T 1p4o_A           99 QGQPTLVIMELMTRGDLKSYLRSL  122 (322)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHH
T ss_pred             cCCccEEEEEeCCCCcHHHHHHHh
Confidence            999999999999999999999763

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.35  E-value=9.2e-13  Score=97.19  Aligned_cols=79  Identities=22%  Similarity=0.250  Sum_probs=67.3

Q ss_pred             CCCeEEEEEeccCCceEEEe-----------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-----------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-----------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      +++|++.+.||+|+||.||+           |          ..+.+.+|+.++..++||||+++++++.+.+.+++|||
T Consensus         1 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (288)
T 1ob3_A            1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE   80 (288)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             CccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence            36799999999999999998           1          12467899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |+++ +|.+++... .+.+++.
T Consensus        81 ~~~~-~l~~~~~~~-~~~~~~~  100 (288)
T 1ob3_A           81 HLDQ-DLKKLLDVC-EGGLESV  100 (288)
T ss_dssp             CCSE-EHHHHHHTS-TTCCCHH
T ss_pred             ecCC-CHHHHHHhc-ccCCCHH
Confidence            9985 999999764 2455543

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.35  E-value=2.7e-12  Score=94.81  Aligned_cols=81  Identities=22%  Similarity=0.306  Sum_probs=69.4

Q ss_pred             ccCCCeEEEEEeccCCceEEEe------------ch-----------------hhhHHHHHHHHHhCC-CCCCCceeEEE
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI------------KK-----------------RNRVHIEKEILKMLD-HPFLPSLFAEF  120 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~------------~~-----------------~~~~~~E~~~l~~~~-h~~iv~l~~~~  120 (156)
                      ...++|.+.+.||+|+||.||+            |.                 .+.+.+|+.++..+. ||||+++++++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   93 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence            3468899999999999999998            11                 245678999999995 99999999999


Q ss_pred             EeCCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          121 EASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       121 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      .+...+++||||+++|+|.+++...  +.+++.
T Consensus        94 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~  124 (298)
T 1phk_A           94 ETNTFFFLVFDLMKKGELFDYLTEK--VTLSEK  124 (298)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHH--SSCCHH
T ss_pred             ccCCeEEEEEeccCCCcHHHHHhcc--CCCCHH
Confidence            9999999999999999999999875  556554

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.35  E-value=1e-12  Score=99.69  Aligned_cols=86  Identities=23%  Similarity=0.349  Sum_probs=71.8

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe------------c-------hhhhHHHHHHHHHhCC-----CCCCCceeEEEEe
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI------------K-------KRNRVHIEKEILKMLD-----HPFLPSLFAEFEA  122 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~------------~-------~~~~~~~E~~~l~~~~-----h~~iv~l~~~~~~  122 (156)
                      ..+....++|.+.+.||+|+||.||+            |       ..+.+..|+.++..+.     ||||+++++++..
T Consensus        28 ~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~  107 (360)
T 3llt_A           28 KKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY  107 (360)
T ss_dssp             CTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE
T ss_pred             ecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE
Confidence            44455678999999999999999998            1       1345778999999986     9999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          123 SHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       123 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      .+.+++||||+ +|+|.+++.+.....+++.
T Consensus       108 ~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~  137 (360)
T 3llt_A          108 YDHMCLIFEPL-GPSLYEIITRNNYNGFHIE  137 (360)
T ss_dssp             TTEEEEEECCC-CCBHHHHHHHTTTCCCCHH
T ss_pred             CCeeEEEEcCC-CCCHHHHHHhcCCCCCCHH
Confidence            99999999999 8999999988643446554

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.35  E-value=1.9e-12  Score=95.55  Aligned_cols=84  Identities=19%  Similarity=0.231  Sum_probs=69.4

Q ss_pred             ccCCccCCCeEEEE-EeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEE
Q 043174           67 EHGQVGLDQFQLFR-RLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFE  121 (156)
Q Consensus        67 ~~~~~~~~~~~~~~-~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~  121 (156)
                      ....+..++|.+.+ .||+|+||.||+                        ...+.+.+|+.++..++||||+++++++ 
T Consensus         9 ~~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-   87 (291)
T 1xbb_A            9 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-   87 (291)
T ss_dssp             --CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-
T ss_pred             ceeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-
Confidence            34455667899988 999999999997                        1145688999999999999999999998 


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ..+.+++||||+++|+|.++++..  +.+++.
T Consensus        88 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~  117 (291)
T 1xbb_A           88 EAESWMLVMEMAELGPLNKYLQQN--RHVKDK  117 (291)
T ss_dssp             ESSSEEEEEECCTTEEHHHHHHHC--TTCCHH
T ss_pred             CCCCcEEEEEeCCCCCHHHHHHhC--cCCCHH
Confidence            567789999999999999999875  556654

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.35  E-value=5.4e-12  Score=93.83  Aligned_cols=75  Identities=28%  Similarity=0.466  Sum_probs=65.0

Q ss_pred             CccCCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      ....++|++.+.||+|+||.||+            |           ..+.+.+|+.++..++||||+++++++.+.+.+
T Consensus        28 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~  107 (310)
T 2wqm_A           28 YNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL  107 (310)
T ss_dssp             TSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred             cccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcE
Confidence            34567899999999999999998            1           234578999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHh
Q 043174          127 RLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~  144 (156)
                      +++|||+++|+|.+++..
T Consensus       108 ~lv~e~~~~~~L~~~l~~  125 (310)
T 2wqm_A          108 NIVLELADAGDLSRMIKH  125 (310)
T ss_dssp             EEEEECCCSCBHHHHHHH
T ss_pred             EEEEecCCCCCHHHHHHH
Confidence            999999999999999975

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.35  E-value=1.1e-12  Score=98.41  Aligned_cols=84  Identities=21%  Similarity=0.252  Sum_probs=69.4

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS  123 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~  123 (156)
                      ..+..++|++.+.||+|+||.||+                         ...+.+.+|+.++..++||||+++++++. .
T Consensus         8 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~   86 (325)
T 3kex_A            8 RIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-G   86 (325)
T ss_dssp             CBCCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-B
T ss_pred             hhcCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-C
Confidence            345678899999999999999998                         11245778999999999999999999886 4


Q ss_pred             CeEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ..+++||||+++|+|.+++... .+.+++..
T Consensus        87 ~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~  116 (325)
T 3kex_A           87 SSLQLVTQYLPLGSLLDHVRQH-RGALGPQL  116 (325)
T ss_dssp             SSEEEEEECCTTCBSHHHHHSS-GGGSCTTH
T ss_pred             CccEEEEEeCCCCCHHHHHHHc-cccCCHHH
Confidence            5689999999999999999864 24566543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.34  E-value=2.4e-12  Score=95.48  Aligned_cols=78  Identities=17%  Similarity=0.374  Sum_probs=68.5

Q ss_pred             CCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           73 LDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      .+.|.+.+.||+|+||.||+                     ...+.+.+|+.++..++||||+++++++.+...+++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            35699999999999999999                     223568999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |+++++|.+++..   +.+++.
T Consensus       101 ~~~~~~L~~~~~~---~~~~~~  119 (303)
T 3a7i_A          101 YLGGGSALDLLEP---GPLDET  119 (303)
T ss_dssp             CCTTEEHHHHHTT---SCCCHH
T ss_pred             eCCCCcHHHHHhc---CCCCHH
Confidence            9999999999975   455543

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.34  E-value=1e-12  Score=100.87  Aligned_cols=77  Identities=27%  Similarity=0.428  Sum_probs=60.0

Q ss_pred             CeEE--EEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           75 QFQL--FRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        75 ~~~~--~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      .|.+  .+.||+|+||.||+                    ...+.+.+|+.++..++||||+++++++.+.+.+++||||
T Consensus        88 ~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~  167 (373)
T 2x4f_A           88 FYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEY  167 (373)
T ss_dssp             TEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeC
Confidence            3544  67899999999998                    1345688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e  152 (156)
                      +++|+|.+++... ...+++
T Consensus       168 ~~~~~L~~~l~~~-~~~l~~  186 (373)
T 2x4f_A          168 VDGGELFDRIIDE-SYNLTE  186 (373)
T ss_dssp             CTTCEEHHHHHHT-GGGCCH
T ss_pred             CCCCcHHHHHHhc-CCCCCH
Confidence            9999999998764 234554

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.34  E-value=3.3e-12  Score=93.42  Aligned_cols=73  Identities=22%  Similarity=0.381  Sum_probs=65.4

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      .++|++.+.||+|+||.||+                      .....+.+|+.++..+ +||||+++++++.+.+.+++|
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            46799999999999999999                      1234678899999998 999999999999999999999


Q ss_pred             EeccCCCCHHHHHHhc
Q 043174          130 IEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~  145 (156)
                      |||+++|+|.+++...
T Consensus        90 ~e~~~~~~L~~~l~~~  105 (289)
T 1x8b_A           90 NEYCNGGSLADAISEN  105 (289)
T ss_dssp             EECCTTCBHHHHHHHH
T ss_pred             EEecCCCcHHHHHHhh
Confidence            9999999999999764

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.34  E-value=6.2e-13  Score=97.11  Aligned_cols=79  Identities=24%  Similarity=0.479  Sum_probs=68.5

Q ss_pred             CCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           73 LDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      .++|++.+.||+|+||.||+                     ...+.+.+|+.++..++||||+++++++.+.+..++|||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            36799999999999999998                     123567899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |+++|+|.+++...  ..+++.
T Consensus        86 ~~~~~~L~~~l~~~--~~~~~~  105 (276)
T 2yex_A           86 YCSGGELFDRIEPD--IGMPEP  105 (276)
T ss_dssp             CCTTEEGGGGSBTT--TBCCHH
T ss_pred             ecCCCcHHHHHhhc--cCCCHH
Confidence            99999999998764  456543

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.34  E-value=2.8e-12  Score=96.40  Aligned_cols=82  Identities=22%  Similarity=0.321  Sum_probs=68.4

Q ss_pred             CccCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      .+..++|++.+.||+|+||.||+                         +..+.+.+|+.++..++||||+++++++.+..
T Consensus        11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   90 (327)
T 3poz_A           11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST   90 (327)
T ss_dssp             ECCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS
T ss_pred             hcCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC
Confidence            34567899999999999999998                         12246888999999999999999999998754


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                       .++++||+++|+|.+++... .+.+++.
T Consensus        91 -~~~v~e~~~~g~L~~~l~~~-~~~~~~~  117 (327)
T 3poz_A           91 -VQLITQLMPFGCLLDYVREH-KDNIGSQ  117 (327)
T ss_dssp             -EEEEEECCTTCBHHHHHHHS-TTSCCHH
T ss_pred             -eEEEEEecCCCcHHHHHHhc-CCCCCHH
Confidence             78999999999999999875 3445543

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.33  E-value=3.1e-12  Score=96.02  Aligned_cols=76  Identities=16%  Similarity=0.344  Sum_probs=66.3

Q ss_pred             CeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccC
Q 043174           75 QFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCP  134 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~  134 (156)
                      .|...+.||+|+||.||+                    ...+.+.+|+.++..++||||+++++++...+.+++||||++
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  125 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQ  125 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCC
Confidence            478888999999999998                    123568899999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhcCCCCCCCC
Q 043174          135 GGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       135 ~g~L~~~l~~~~~~~~~e~  153 (156)
                      +|+|.+++.+   ..+++.
T Consensus       126 ~~~L~~~l~~---~~l~~~  141 (321)
T 2c30_A          126 GGALTDIVSQ---VRLNEE  141 (321)
T ss_dssp             SCBHHHHHTT---CCCCHH
T ss_pred             CCCHHHHHHh---cCCCHH
Confidence            9999999875   345543

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.33  E-value=2.3e-12  Score=96.65  Aligned_cols=85  Identities=27%  Similarity=0.350  Sum_probs=70.0

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEE--
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFE--  121 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~--  121 (156)
                      ..-+..++|++.+.||+|+||.||+                        ...+.+.+|+.++..++||||+++++++.  
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   96 (327)
T 3lxl_A           17 PTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGP   96 (327)
T ss_dssp             CCBCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             hhhhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC
Confidence            3446678899999999999999987                        12345889999999999999999999887  


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +...+++||||+++|+|.+++... ...+++.
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~  127 (327)
T 3lxl_A           97 GRQSLRLVMEYLPSGCLRDFLQRH-RARLDAS  127 (327)
T ss_dssp             SSCEEEEEEECCTTCBHHHHHHHH-GGGCCHH
T ss_pred             CCceEEEEEeecCCCCHHHHHHhc-ccCCCHH
Confidence            456799999999999999999874 2345543

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.33  E-value=1.1e-12  Score=101.20  Aligned_cols=74  Identities=31%  Similarity=0.435  Sum_probs=64.9

Q ss_pred             cCCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC--eEEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH--YSRL  128 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~--~~~l  128 (156)
                      ..+.|.+.+.||+|+||.||+                     ...+.+.+|+.++..++||||+++++++.+..  .+++
T Consensus         7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l   86 (396)
T 4eut_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL   86 (396)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred             CCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence            456799999999999999999                     12345779999999999999999999998755  7899


Q ss_pred             EEeccCCCCHHHHHHhc
Q 043174          129 VIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~  145 (156)
                      ||||+++|+|.++++..
T Consensus        87 v~e~~~~g~L~~~l~~~  103 (396)
T 4eut_A           87 IMEFCPCGSLYTVLEEP  103 (396)
T ss_dssp             EECCCTTEEHHHHTTSG
T ss_pred             EEecCCCCCHHHHHHhh
Confidence            99999999999999864

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.33  E-value=3.4e-12  Score=94.00  Aligned_cols=79  Identities=32%  Similarity=0.440  Sum_probs=69.4

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      .++|++.+.||+|+||.||+                      ...+.+.+|+.++..++||||+++++++.+...++++|
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  100 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence            46799999999999999998                      12346889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||+++++|.+++...  +.+++.
T Consensus       101 e~~~~~~L~~~l~~~--~~~~~~  121 (287)
T 2wei_A          101 ELYTGGELFDEIIKR--KRFSEH  121 (287)
T ss_dssp             CCCCSCBHHHHHHHH--SSCCHH
T ss_pred             EccCCCCHHHHHHhc--CCCCHH
Confidence            999999999999775  556654

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.33  E-value=1.8e-12  Score=94.90  Aligned_cols=81  Identities=19%  Similarity=0.272  Sum_probs=67.3

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe--------------
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA--------------  122 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~--------------  122 (156)
                      ..+|++.+.||+|+||.||+                ...+.+.+|+.++..++||||+++++++..              
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~   89 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSR   89 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------C
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccc
Confidence            35699999999999999999                123568899999999999999999998865              


Q ss_pred             --CCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          123 --SHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       123 --~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                        ...++++|||+++|+|.+++.......+++.
T Consensus        90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  122 (284)
T 2a19_B           90 SKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV  122 (284)
T ss_dssp             CEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHH
T ss_pred             cCcceEEEEEeccCCCCHHHHHhhccCCCCCHH
Confidence              4458999999999999999986533455543

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.33  E-value=3e-12  Score=96.25  Aligned_cols=80  Identities=19%  Similarity=0.301  Sum_probs=68.6

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEEec
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      ..++|.+.+.||+|+||.||+                  ...+.+.+|+.++..+ +||||+++++++.+....++||||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~   86 (330)
T 2izr_A            7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL   86 (330)
T ss_dssp             ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred             EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence            357899999999999999998                  1234689999999999 999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      + +|+|.+++... .+.+++.
T Consensus        87 ~-~~~L~~~~~~~-~~~~~~~  105 (330)
T 2izr_A           87 L-GPSLEDLFDLC-DRTFSLK  105 (330)
T ss_dssp             C-CCBHHHHHHHT-TTCCCHH
T ss_pred             C-CCCHHHHHHHc-CCCCCHH
Confidence            9 89999999874 3556654

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.32  E-value=1.5e-12  Score=100.73  Aligned_cols=83  Identities=20%  Similarity=0.298  Sum_probs=65.2

Q ss_pred             cCCCeEEE-EEeccCCceEEEe---------------chhhhHHHHHHHHH-hCCCCCCCceeEEEEe----CCeEEEEE
Q 043174           72 GLDQFQLF-RRLGSGIIRSVYI---------------KKRNRVHIEKEILK-MLDHPFLPSLFAEFEA----SHYSRLVI  130 (156)
Q Consensus        72 ~~~~~~~~-~~lG~G~~g~V~~---------------~~~~~~~~E~~~l~-~~~h~~iv~l~~~~~~----~~~~~lv~  130 (156)
                      ..++|.+. +.||+|+||.||+               +....+.+|+.++. ..+||||+++++++..    ...+|+||
T Consensus        59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~  138 (400)
T 1nxk_A           59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM  138 (400)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcchhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEE
Confidence            35678776 7899999999999               22346788999875 4589999999999876    56799999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ||++||+|.++|.......+++..
T Consensus       139 E~~~gg~L~~~l~~~~~~~l~~~~  162 (400)
T 1nxk_A          139 ECLDGGELFSRIQDRGDQAFTERE  162 (400)
T ss_dssp             ECCCSEEHHHHHHCC---CCBHHH
T ss_pred             EeCCCCcHHHHHHHhCCCCCCHHH
Confidence            999999999999875333466543

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.32  E-value=5e-12  Score=92.51  Aligned_cols=73  Identities=22%  Similarity=0.468  Sum_probs=64.3

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe--CCeEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA--SHYSRL  128 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~--~~~~~l  128 (156)
                      .++|++.+.||+|+||.||+                      ...+.+.+|+.++..++||||+++++++.+  ...+++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            57899999999999999998                      123468899999999999999999998754  678999


Q ss_pred             EEeccCCCCHHHHHHhc
Q 043174          129 VIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~  145 (156)
                      ||||+++|+|.+++...
T Consensus        85 v~e~~~~~~L~~~l~~~  101 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKG  101 (279)
T ss_dssp             EEECCTTEEHHHHHHHH
T ss_pred             EEeCCCCCCHHHHHHhh
Confidence            99999999999999764

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.32  E-value=1.6e-12  Score=97.36  Aligned_cols=77  Identities=31%  Similarity=0.448  Sum_probs=65.0

Q ss_pred             CCeEEEEEeccCCceEEEe------------ch----------------hhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------KK----------------RNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~~----------------~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      ++|.+.+.||+|+||.||+            |.                ...+.+|+.++..++||||+++++++.... 
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   88 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-   88 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence            5699999999999999998            11                124789999999999999999999987655 


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +|+||||+++|+|.+++...  +.+++.
T Consensus        89 ~~lv~e~~~~~~L~~~~~~~--~~~~~~  114 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVVGN--KRLKEA  114 (322)
T ss_dssp             EEEEEECCTTEETHHHHSTT--CCCCHH
T ss_pred             eEEEEecCCCCcHHHHHhcc--CCCCHH
Confidence            89999999999999999765  566654

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.32  E-value=8.7e-13  Score=97.71  Aligned_cols=81  Identities=28%  Similarity=0.338  Sum_probs=64.5

Q ss_pred             CccCCCeEEEEEeccCCceEEEe------------ch----------------------------------hhhHHHHHH
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI------------KK----------------------------------RNRVHIEKE  103 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~------------~~----------------------------------~~~~~~E~~  103 (156)
                      ....++|.+.+.||+|+||.||+            |.                                  .+.+.+|+.
T Consensus         9 ~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   88 (298)
T 2zv2_A            9 CVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIA   88 (298)
T ss_dssp             -CEETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHH
T ss_pred             ceeecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHH
Confidence            34568899999999999999999            11                                  245789999


Q ss_pred             HHHhCCCCCCCceeEEEEe--CCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          104 ILKMLDHPFLPSLFAEFEA--SHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       104 ~l~~~~h~~iv~l~~~~~~--~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++..++||||+++++++.+  ...+|+||||+++|+|.+++..   +.+++.
T Consensus        89 ~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~  137 (298)
T 2zv2_A           89 ILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSED  137 (298)
T ss_dssp             HHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHH
T ss_pred             HHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHH
Confidence            9999999999999999987  5689999999999998876543   345543

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.32  E-value=1.7e-12  Score=95.98  Aligned_cols=81  Identities=20%  Similarity=0.240  Sum_probs=66.5

Q ss_pred             ccCCCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEE-EeCCe
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEF-EASHY  125 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~-~~~~~  125 (156)
                      .....|++.+.||+|+||.||+                        ...+.+.+|+.+++.++||||+++++++ ..++.
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  101 (298)
T 3f66_A           22 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS  101 (298)
T ss_dssp             GGGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred             ccceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence            3445689999999999999997                        1235678999999999999999999985 45678


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      .+++|||+++|+|.++++.. ...+++
T Consensus       102 ~~~v~e~~~~~~L~~~l~~~-~~~~~~  127 (298)
T 3f66_A          102 PLVVLPYMKHGDLRNFIRNE-THNPTV  127 (298)
T ss_dssp             CEEEEECCTTCBHHHHHHCT-TCCCCH
T ss_pred             eEEEEeCCCCCCHHHHHHhc-ccCCCH
Confidence            99999999999999999764 234443

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.32  E-value=2e-12  Score=96.94  Aligned_cols=76  Identities=22%  Similarity=0.299  Sum_probs=65.6

Q ss_pred             CccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS  123 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~  123 (156)
                      .+..++|.+.+.||+|+||.||+                          .....+.+|+.++..++||||+++++++.+.
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  105 (327)
T 2yfx_A           26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS  105 (327)
T ss_dssp             BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence            45567899999999999999997                          1123578899999999999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHHhc
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      ..+|+||||+++|+|.+++...
T Consensus       106 ~~~~lv~e~~~~~~L~~~l~~~  127 (327)
T 2yfx_A          106 LPRFILMELMAGGDLKSFLRET  127 (327)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHT
T ss_pred             CCcEEEEecCCCCcHHHHHHhh
Confidence            9999999999999999999875

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.32  E-value=9.4e-13  Score=96.50  Aligned_cols=77  Identities=23%  Similarity=0.387  Sum_probs=66.6

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEE
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      .+.+..++|++.+.||+|+||.||+                  ...+.+.+|+.++..++||||+++++++. .+.++++
T Consensus         7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v   85 (279)
T 1qpc_A            7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYII   85 (279)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred             hcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEE
Confidence            4456678899999999999999998                  12456889999999999999999999876 4568999


Q ss_pred             EeccCCCCHHHHHHhc
Q 043174          130 IEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~  145 (156)
                      |||+++|+|.+++...
T Consensus        86 ~e~~~~~~L~~~l~~~  101 (279)
T 1qpc_A           86 TEYMENGSLVDFLKTP  101 (279)
T ss_dssp             EECCTTCBHHHHTTSH
T ss_pred             EecCCCCCHHHHHhcC
Confidence            9999999999999754

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.32  E-value=4.4e-12  Score=94.85  Aligned_cols=84  Identities=19%  Similarity=0.365  Sum_probs=70.5

Q ss_pred             CccCCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEe------C
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEA------S  123 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~------~  123 (156)
                      ....+.|.+.+.||+|+||.||+                   ...+.+.+|+.++..+ +||||+++++++..      .
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~   99 (326)
T 2x7f_A           20 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   99 (326)
T ss_dssp             CCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCC
T ss_pred             cCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcccc
Confidence            44568899999999999999999                   2245688999999998 89999999999987      4


Q ss_pred             CeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ..+++||||+++|+|.+++.......+++.
T Consensus       100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~  129 (326)
T 2x7f_A          100 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEE  129 (326)
T ss_dssp             CEEEEEEECCTTEEHHHHHHHSGGGCCCHH
T ss_pred             ceEEEEEEcCCCCcHHHHHHhcccCCCCHH
Confidence            689999999999999999987533445543

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.32  E-value=4.1e-12  Score=93.56  Aligned_cols=82  Identities=23%  Similarity=0.333  Sum_probs=67.1

Q ss_pred             CccCCCeEEEE-EeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           70 QVGLDQFQLFR-RLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        70 ~~~~~~~~~~~-~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      .+..++|.+.+ .||+|+||.||+                       ...+.+.+|+.++..++||||+++++++ ..+.
T Consensus         5 ~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~   83 (287)
T 1u59_A            5 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEA   83 (287)
T ss_dssp             BCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSS
T ss_pred             cccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCC
Confidence            34567788877 999999999997                       1234688999999999999999999998 4567


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +++||||+++|+|.+++... ...+++.
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~  110 (287)
T 1u59_A           84 LMLVMEMAGGGPLHKFLVGK-REEIPVS  110 (287)
T ss_dssp             EEEEEECCTTEEHHHHHTTC-TTTSCHH
T ss_pred             cEEEEEeCCCCCHHHHHHhC-CccCCHH
Confidence            99999999999999999754 3445543

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.32  E-value=1.5e-12  Score=96.12  Aligned_cols=76  Identities=21%  Similarity=0.351  Sum_probs=56.2

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR  127 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~  127 (156)
                      ..+..++|.+.+.||+|+||.||+                     ...+.+.+|+.++..++||||+++++++...+.++
T Consensus        10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   89 (303)
T 2vwi_A           10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW   89 (303)
T ss_dssp             ---CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred             cccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence            456678999999999999999999                     12345678999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHh
Q 043174          128 LVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~  144 (156)
                      +||||+++|+|.+++..
T Consensus        90 lv~e~~~~~~L~~~l~~  106 (303)
T 2vwi_A           90 LVMKLLSGGSVLDIIKH  106 (303)
T ss_dssp             EEEECCTTCBHHHHHHH
T ss_pred             EEehhccCCchHHHHHH
Confidence            99999999999999975

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.31  E-value=5.1e-12  Score=93.35  Aligned_cols=79  Identities=24%  Similarity=0.352  Sum_probs=67.9

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      +++|++.+.||+|+||.||+            |          ..+.+.+|+.++..++||||+++++++.+.+.++++|
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF   81 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence            57899999999999999998            1          1245789999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      ||+. |+|.+++.......+++
T Consensus        82 e~~~-~~L~~~~~~~~~~~~~~  102 (299)
T 2r3i_A           82 EFLH-QDLKKFMDASALTGIPL  102 (299)
T ss_dssp             ECCS-EEHHHHHHHTTTTCCCH
T ss_pred             Eccc-CCHHHHHHhhhccCCCH
Confidence            9998 69999998753344554

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.31  E-value=3.7e-12  Score=94.49  Aligned_cols=81  Identities=21%  Similarity=0.348  Sum_probs=66.9

Q ss_pred             CCCeEEE-EEeccCCceEEEe---------------chhhhHHHHHHHH-HhCCCCCCCceeEEEEe----CCeEEEEEe
Q 043174           73 LDQFQLF-RRLGSGIIRSVYI---------------KKRNRVHIEKEIL-KMLDHPFLPSLFAEFEA----SHYSRLVIE  131 (156)
Q Consensus        73 ~~~~~~~-~~lG~G~~g~V~~---------------~~~~~~~~E~~~l-~~~~h~~iv~l~~~~~~----~~~~~lv~E  131 (156)
                      .++|.+. +.||+|+||.||+               +....+.+|+.++ +..+||||+++++++.+    ...+++|||
T Consensus        16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e   95 (299)
T 3m2w_A           16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME   95 (299)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEC
T ss_pred             ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecccHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEe
Confidence            5677777 7899999999998               2345678899988 55699999999999987    678999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |+++|+|.+++.......+++.
T Consensus        96 ~~~~~~L~~~l~~~~~~~~~~~  117 (299)
T 3m2w_A           96 CLDGGELFSRIQDRGDQAFTER  117 (299)
T ss_dssp             CCCSCBHHHHHHHCTTCCCBHH
T ss_pred             ecCCCcHHHHHHhccCCCCCHH
Confidence            9999999999988633456654

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.31  E-value=2.1e-12  Score=97.07  Aligned_cols=81  Identities=19%  Similarity=0.176  Sum_probs=68.9

Q ss_pred             ccCCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      ...++|++.+.||+|+||.||+            |          ..+.+.+|+.++..++||||+++++++.+.+.+++
T Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  101 (331)
T 4aaa_A           22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL  101 (331)
T ss_dssp             BCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             hhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence            4568899999999999999998            1          12346789999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||||++++.|..++...  +.+++.
T Consensus       102 v~e~~~~~~l~~~~~~~--~~~~~~  124 (331)
T 4aaa_A          102 VFEFVDHTILDDLELFP--NGLDYQ  124 (331)
T ss_dssp             EEECCSEEHHHHHHHST--TCCCHH
T ss_pred             EEecCCcchHHHHHhhc--cCCCHH
Confidence            99999998888887654  455543

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.31  E-value=3.5e-12  Score=93.81  Aligned_cols=81  Identities=21%  Similarity=0.309  Sum_probs=67.3

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe------------ch---------------hhhHHHHHHHHHhCCCCCCCceeEEEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI------------KK---------------RNRVHIEKEILKMLDHPFLPSLFAEFE  121 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~------------~~---------------~~~~~~E~~~l~~~~h~~iv~l~~~~~  121 (156)
                      +.+..++|.+.+.||+|+||.||+            |.               .+.+.+|+.++..++||||+++++++.
T Consensus        14 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   93 (287)
T 4f0f_A           14 PTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH   93 (287)
T ss_dssp             CBCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEET
T ss_pred             hhhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeec
Confidence            345678899999999999999998            11               156889999999999999999999987


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhcCCCCCCC
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      +..  +++|||+++|+|.+++.+. ...+++
T Consensus        94 ~~~--~lv~e~~~~~~L~~~l~~~-~~~~~~  121 (287)
T 4f0f_A           94 NPP--RMVMEFVPCGDLYHRLLDK-AHPIKW  121 (287)
T ss_dssp             TTT--EEEEECCTTCBHHHHHHCT-TSCCCH
T ss_pred             CCC--eEEEEecCCCCHHHHHhcc-cCCccH
Confidence            655  6999999999999998764 234554

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.31  E-value=5.3e-12  Score=95.00  Aligned_cols=82  Identities=22%  Similarity=0.321  Sum_probs=69.2

Q ss_pred             CccCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      .+..++|++.+.||+|+||.||+                         ...+.+.+|+.++..++||||+++++++.+..
T Consensus        11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   90 (327)
T 3lzb_A           11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST   90 (327)
T ss_dssp             ECCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS
T ss_pred             ccCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC
Confidence            35568899999999999999998                         12356889999999999999999999998755


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                       .++++||+++|+|.+++... .+.+++.
T Consensus        91 -~~~v~~~~~~g~L~~~l~~~-~~~~~~~  117 (327)
T 3lzb_A           91 -VQLITQLMPFGCLLDYVREH-KDNIGSQ  117 (327)
T ss_dssp             -EEEEECCCSSCBHHHHHHHT-TTCCCHH
T ss_pred             -ceEEEEecCCCcHHHHHHhc-CCCCCHH
Confidence             88999999999999999875 3446543

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.31  E-value=5.1e-12  Score=102.81  Aligned_cols=81  Identities=25%  Similarity=0.361  Sum_probs=66.3

Q ss_pred             ccCCCeEEEE-EeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           71 VGLDQFQLFR-RLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        71 ~~~~~~~~~~-~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      +..+++.+.+ .||+|+||.||+                       ...+.+.+|+.+|..++|||||++++++.+ +.+
T Consensus       332 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~  410 (613)
T 2ozo_A          332 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EAL  410 (613)
T ss_dssp             CCTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSE
T ss_pred             ccccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCe
Confidence            3445666666 899999999997                       134568999999999999999999999876 569


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++||||+++|+|.+++... .+.+++.
T Consensus       411 ~lv~E~~~~g~L~~~l~~~-~~~l~~~  436 (613)
T 2ozo_A          411 MLVMEMAGGGPLHKFLVGK-REEIPVS  436 (613)
T ss_dssp             EEEEECCTTCBHHHHHTTC-TTTSCHH
T ss_pred             EEEEEeCCCCcHHHHHhhc-cCCCCHH
Confidence            9999999999999999764 3445543

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.30  E-value=2.5e-12  Score=95.90  Aligned_cols=73  Identities=23%  Similarity=0.390  Sum_probs=64.0

Q ss_pred             ccCCCeEEEEEeccCCceEEEe----------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccC
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI----------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCP  134 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~----------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~  134 (156)
                      +..++|++.+.||+|+||.||+                ...+.+.+|+.++..++||||+++++++.  +..++||||++
T Consensus         5 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~   82 (307)
T 2eva_A            5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE   82 (307)
T ss_dssp             CCGGGEEEEEEEECCSSSEEEEEEETTEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred             CCHhHeeeeeEeecCCCceEEEEEECCeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence            4567899999999999999999                23456889999999999999999999876  44899999999


Q ss_pred             CCCHHHHHHhc
Q 043174          135 GGDLLTVSQRQ  145 (156)
Q Consensus       135 ~g~L~~~l~~~  145 (156)
                      +|+|.+++...
T Consensus        83 ~~~L~~~l~~~   93 (307)
T 2eva_A           83 GGSLYNVLHGA   93 (307)
T ss_dssp             TCBHHHHHHCS
T ss_pred             CCCHHHHHhcc
Confidence            99999999864

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.30  E-value=4.2e-12  Score=95.24  Aligned_cols=84  Identities=25%  Similarity=0.320  Sum_probs=67.9

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS  123 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~  123 (156)
                      ...+..++|++.+.||+|+||.||+                        ...+.+.+|+.++..++||||+++++++...
T Consensus        35 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  114 (326)
T 2w1i_A           35 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA  114 (326)
T ss_dssp             --CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-
T ss_pred             ccccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec
Confidence            3456678899999999999999986                        1234688999999999999999999988664


Q ss_pred             C--eEEEEEeccCCCCHHHHHHhcCCCCCCC
Q 043174          124 H--YSRLVIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       124 ~--~~~lv~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      +  .+++||||+++|+|.+++... ...+++
T Consensus       115 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~  144 (326)
T 2w1i_A          115 GRRNLKLIMEYLPYGSLRDYLQKH-KERIDH  144 (326)
T ss_dssp             ---CCEEEECCCTTCBHHHHHHHS-TTSSCH
T ss_pred             CCCceEEEEECCCCCCHHHHHHhc-ccCCCH
Confidence            3  789999999999999999875 234554

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.30  E-value=3.6e-12  Score=95.45  Aligned_cols=72  Identities=24%  Similarity=0.365  Sum_probs=50.7

Q ss_pred             CCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           73 LDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      .++|++.+.||+|+||.||+                     ...+.+.+|+.++..++||||+++++++.+++.+++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            46799999999999999998                     122468899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhc
Q 043174          132 YCPGGDLLTVSQRQ  145 (156)
Q Consensus       132 ~~~~g~L~~~l~~~  145 (156)
                      |++ |+|.+++...
T Consensus        84 ~~~-~~L~~~l~~~   96 (317)
T 2pmi_A           84 FMD-NDLKKYMDSR   96 (317)
T ss_dssp             CCC-CBHHHHHHHH
T ss_pred             ecC-CCHHHHHHhc
Confidence            998 5999999764

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.30  E-value=7.1e-12  Score=95.28  Aligned_cols=78  Identities=26%  Similarity=0.388  Sum_probs=66.0

Q ss_pred             CCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      +.|.+.+.||+|+||.||+            |           ..+.+.+|+.++..++||||+++++++.+.+.+++||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            4599999999999999998            1           1245789999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||+. |+|.+++... .+.+++.
T Consensus       134 e~~~-g~l~~~l~~~-~~~l~~~  154 (348)
T 1u5q_A          134 EYCL-GSASDLLEVH-KKPLQEV  154 (348)
T ss_dssp             ECCS-EEHHHHHHHH-TSCCCHH
T ss_pred             ecCC-CCHHHHHHHh-cCCCCHH
Confidence            9998 6888888654 2456543

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.30  E-value=4.5e-12  Score=93.01  Aligned_cols=82  Identities=26%  Similarity=0.419  Sum_probs=68.2

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      ..+..++|.+.+.||+|+||.||+                        ...+.+.+|+.++..++||||+++++++.+ +
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~   85 (281)
T 3cc6_A            7 YGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-E   85 (281)
T ss_dssp             CSCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-S
T ss_pred             ceecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-C
Confidence            355678899999999999999998                        123467889999999999999999998865 4


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      ..+++|||+++|+|.+++.+. ...+++
T Consensus        86 ~~~~v~e~~~~~~L~~~l~~~-~~~~~~  112 (281)
T 3cc6_A           86 PTWIIMELYPYGELGHYLERN-KNSLKV  112 (281)
T ss_dssp             SCEEEEECCTTCBHHHHHHHH-TTTCCH
T ss_pred             CCEEEEecCCCCCHHHHHHhc-cccCCH
Confidence            578999999999999999875 234554

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.30  E-value=9.7e-13  Score=103.17  Aligned_cols=79  Identities=18%  Similarity=0.222  Sum_probs=59.4

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEe-----CCe
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEA-----SHY  125 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~-----~~~  125 (156)
                      .++|.+.+.||+|+||.||+            |          ..+.+.+|+.+|..++||||+++++++..     ...
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            47899999999999999998            1          23467899999999999999999999844     357


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      +|+||||+. |+|.++++..  +.+++.+
T Consensus       132 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~  157 (458)
T 3rp9_A          132 LYVVLEIAD-SDFKKLFRTP--VYLTELH  157 (458)
T ss_dssp             EEEEECCCS-EEHHHHHHSS--CCCCHHH
T ss_pred             EEEEEeccc-cchhhhcccC--CCCCHHH
Confidence            999999985 7999999875  6677654

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.29  E-value=8.1e-12  Score=93.36  Aligned_cols=78  Identities=24%  Similarity=0.262  Sum_probs=63.0

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA  122 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~  122 (156)
                      ...+..++|.+.+.||+|+||.||+                         ...+.+.+|+.++..++||||+++++++.+
T Consensus        17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   96 (323)
T 3qup_A           17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR   96 (323)
T ss_dssp             TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred             hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence            3456678899999999999999998                         123457899999999999999999999988


Q ss_pred             CCeE------EEEEeccCCCCHHHHHHhc
Q 043174          123 SHYS------RLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       123 ~~~~------~lv~E~~~~g~L~~~l~~~  145 (156)
                      ....      +++|||+++|+|.+++...
T Consensus        97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~  125 (323)
T 3qup_A           97 SRAKGRLPIPMVILPFMKHGDLHAFLLAS  125 (323)
T ss_dssp             C-------CEEEEEECCTTCBHHHHHHHH
T ss_pred             cccccCCCccEEEEEeccCCcHHHHHHhh
Confidence            7655      9999999999999999764

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.29  E-value=1.2e-12  Score=98.79  Aligned_cols=73  Identities=12%  Similarity=0.248  Sum_probs=65.7

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe----------c-----------hh--------------hhHHHHHHHHHhCCCCCC
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI----------K-----------KR--------------NRVHIEKEILKMLDHPFL  113 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~----------~-----------~~--------------~~~~~E~~~l~~~~h~~i  113 (156)
                      .....++|.+.+.||+|+||.||+          |           ..              +.+.+|+.++..++||||
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i  105 (348)
T 2pml_X           26 KDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC  105 (348)
T ss_dssp             SCEEETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTB
T ss_pred             cccccCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCc
Confidence            345568999999999999999998          0           01              778999999999999999


Q ss_pred             CceeEEEEeCCeEEEEEeccCCCCHHHH
Q 043174          114 PSLFAEFEASHYSRLVIEYCPGGDLLTV  141 (156)
Q Consensus       114 v~l~~~~~~~~~~~lv~E~~~~g~L~~~  141 (156)
                      +++++++.+.+.+++||||+++|+|.++
T Consensus       106 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~  133 (348)
T 2pml_X          106 LTCEGIITNYDEVYIIYEYMENDSILKF  133 (348)
T ss_dssp             CCCSEEEESSSEEEEEEECCTTCBSSEE
T ss_pred             ceEEEEEeeCCeEEEEEeccCCCcHHHH
Confidence            9999999999999999999999999998

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.28  E-value=3.2e-12  Score=96.62  Aligned_cols=80  Identities=29%  Similarity=0.459  Sum_probs=68.9

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCC
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------------KRNRVHIEKEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      .++|.+.+.||+|+||.||+            |                ..+.+.+|+.++..++||||+++++++.+.+
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            46799999999999999999            1                2235678999999999999999999999999


Q ss_pred             eEEEEEeccCCC-CHHHHHHhcCCCCCCCCC
Q 043174          125 YSRLVIEYCPGG-DLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       125 ~~~lv~E~~~~g-~L~~~l~~~~~~~~~e~~  154 (156)
                      .+++||||+.+| +|.+++...  +.+++..
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~~--~~l~~~~  131 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDRH--PRLDEPL  131 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHTC--CCCCHHH
T ss_pred             EEEEEEEeCCCCccHHHHHHhc--CCCCHHH
Confidence            999999999777 999999875  5666543

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.28  E-value=8.2e-12  Score=94.42  Aligned_cols=80  Identities=19%  Similarity=0.238  Sum_probs=68.1

Q ss_pred             ccCCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCC--CCCCceeEEEEeCCeEE
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDH--PFLPSLFAEFEASHYSR  127 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h--~~iv~l~~~~~~~~~~~  127 (156)
                      +..+.|.+.+.||+|+||.||+                     ...+.+.+|+.++..+.|  +||+++++++.+...++
T Consensus         6 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~   85 (343)
T 3dbq_A            6 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY   85 (343)
T ss_dssp             SSSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             eecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEE
Confidence            3456799999999999999998                     123567899999999976  99999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +||| +.+|+|.+++.+.  +.+++.
T Consensus        86 lv~e-~~~~~L~~~l~~~--~~~~~~  108 (343)
T 3dbq_A           86 MVME-CGNIDLNSWLKKK--KSIDPW  108 (343)
T ss_dssp             EEEC-CCSEEHHHHHHHS--CCCCHH
T ss_pred             EEEe-CCCCCHHHHHHhc--CCCCHH
Confidence            9999 5678999999885  566654

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.28  E-value=1.4e-12  Score=97.86  Aligned_cols=79  Identities=23%  Similarity=0.288  Sum_probs=65.8

Q ss_pred             CCCeEEEEEeccCCceEEEe------------ch---------hhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------KK---------RNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~~---------~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      +++|.+.+.||+|+||.||+            |.         ...+.+|+.++..++||||+++++++.+.+.+++|||
T Consensus         1 l~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (324)
T 3mtl_A            1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE   80 (324)
T ss_dssp             CCSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             CCceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence            36899999999999999999            11         1134579999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |++ |+|.+++... ...+++.
T Consensus        81 ~~~-~~l~~~~~~~-~~~~~~~  100 (324)
T 3mtl_A           81 YLD-KDLKQYLDDC-GNIINMH  100 (324)
T ss_dssp             CCS-EEHHHHHHHT-TTCCCHH
T ss_pred             ccc-cCHHHHHHhc-CCCCCHH
Confidence            998 5999999875 2345543

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.28  E-value=6.9e-12  Score=95.51  Aligned_cols=75  Identities=21%  Similarity=0.256  Sum_probs=65.8

Q ss_pred             CccCCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCC---CCCCCceeEEEEeCC
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLD---HPFLPSLFAEFEASH  124 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~---h~~iv~l~~~~~~~~  124 (156)
                      .+..++|.+.+.||+|+||.||+                      .....+..|+.++..++   |+||+.+++++...+
T Consensus        61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~  140 (365)
T 3e7e_A           61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN  140 (365)
T ss_dssp             ECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred             EECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence            34567799999999999999998                      12345788899998887   999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHh
Q 043174          125 YSRLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~  144 (156)
                      ..|+||||+++|+|.+++..
T Consensus       141 ~~~lv~e~~~~g~L~~~l~~  160 (365)
T 3e7e_A          141 GSVLVGELYSYGTLLNAINL  160 (365)
T ss_dssp             CEEEEECCCCSCBHHHHHHH
T ss_pred             CcEEEEeccCCCcHHHHHHH
Confidence            99999999999999999975

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.28  E-value=7.9e-12  Score=93.10  Aligned_cols=83  Identities=18%  Similarity=0.331  Sum_probs=66.0

Q ss_pred             ccCCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe----CCeE
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA----SHYS  126 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~----~~~~  126 (156)
                      +..++|++.+.||+|+||.||+                    ...+.+.+|+.++..++||||+++++++..    ...+
T Consensus        26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  105 (317)
T 2buj_A           26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA  105 (317)
T ss_dssp             ETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred             ECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence            4457799999999999999998                    124568899999999999999999998863    3479


Q ss_pred             EEEEeccCCCCHHHHHHhcC--CCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQR--RLRFSIP  153 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~--~~~~~e~  153 (156)
                      ++||||+++|+|.+++....  ...+++.
T Consensus       106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  134 (317)
T 2buj_A          106 WLLLPFFKRGTLWNEIERLKDKGNFLTED  134 (317)
T ss_dssp             EEEEECCTTCBHHHHHHHHHTTTCCCCHH
T ss_pred             EEEEEeCCCCcHHHHHHHHHhcCCCCCHH
Confidence            99999999999999997631  2445543

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.28  E-value=8.6e-12  Score=91.90  Aligned_cols=72  Identities=22%  Similarity=0.407  Sum_probs=63.2

Q ss_pred             CCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe------------
Q 043174           74 DQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA------------  122 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~------------  122 (156)
                      ++|++.+.||+|+||.||+                   ...+.+.+|+.++..++||||+++++++.+            
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~   85 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK   85 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence            5699999999999999999                   223568899999999999999999998865            


Q ss_pred             -CCeEEEEEeccCCCCHHHHHHhc
Q 043174          123 -SHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       123 -~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                       ...+|+||||+++|+|.+++...
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~l~~~  109 (303)
T 1zy4_A           86 KKSTLFIQMEYCENGTLYDLIHSE  109 (303)
T ss_dssp             CEEEEEEEEECCCSCBHHHHHHHS
T ss_pred             cCCceEEEEecCCCCCHHHhhhcc
Confidence             35789999999999999999864

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.27  E-value=4.6e-13  Score=99.85  Aligned_cols=86  Identities=13%  Similarity=0.250  Sum_probs=73.8

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEE
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR  127 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~  127 (156)
                      ....+..++|++.+.||+|+||.||+                   ...+.+.+|+.++..++||||+++++++.+...++
T Consensus        26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  105 (319)
T 2y4i_B           26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA  105 (319)
T ss_dssp             GGSSSCCSCEECCCBCCCSSSSEEEEEEESSSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEE
T ss_pred             ccccCCHHHeEEeeEeccCCceEEEEEEEcCeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceE
Confidence            45567789999999999999999998                   12345778999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++|||+++|+|.+++... ...+++.
T Consensus       106 iv~e~~~~~~L~~~l~~~-~~~~~~~  130 (319)
T 2y4i_B          106 IITSLCKGRTLYSVVRDA-KIVLDVN  130 (319)
T ss_dssp             EECBCCCSEEHHHHTTSS-CCCCCSH
T ss_pred             EEeecccCCcHHHHHHhc-CCCCCHH
Confidence            999999999999999875 2346654

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.27  E-value=4.7e-12  Score=93.38  Aligned_cols=77  Identities=19%  Similarity=0.257  Sum_probs=63.8

Q ss_pred             CeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE-EEE
Q 043174           75 QFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS-RLV  129 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~-~lv  129 (156)
                      .|.+.+.||+|+||.||+                        ...+.+.+|+.++..++||||+++++++.+.+.. +++
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            466779999999999997                        1235678999999999999999999999876655 999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCC
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      |||+.+|+|.+++... ...+++
T Consensus       102 ~e~~~~~~L~~~~~~~-~~~~~~  123 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSP-QRNPTV  123 (298)
T ss_dssp             ECCCTTCBHHHHHHCT-TCCCBH
T ss_pred             EecccCCCHHHHHhcc-ccCCCH
Confidence            9999999999999864 244443

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.27  E-value=6.9e-12  Score=102.78  Aligned_cols=81  Identities=20%  Similarity=0.390  Sum_probs=67.4

Q ss_pred             CccCCCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      .+..++|.+.+.||+|+||.||+                        ...+.+.+|+.++..++||||+++++++. ++.
T Consensus       386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~  464 (656)
T 2j0j_A          386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP  464 (656)
T ss_dssp             BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred             ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCc
Confidence            45567899999999999999997                        11256889999999999999999999884 567


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      +++||||+++|+|.++++.. ...+++
T Consensus       465 ~~lv~E~~~~g~L~~~l~~~-~~~l~~  490 (656)
T 2j0j_A          465 VWIIMELCTLGELRSFLQVR-KFSLDL  490 (656)
T ss_dssp             CEEEEECCTTCBHHHHHHHT-TTTCCH
T ss_pred             eEEEEEcCCCCcHHHHHHhc-cCCCCH
Confidence            89999999999999999864 234443

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.26  E-value=1.1e-11  Score=91.60  Aligned_cols=80  Identities=19%  Similarity=0.210  Sum_probs=64.3

Q ss_pred             CccCCCeEEEEEeccCCceEEEe---------------chhhhHHHHHHHHHh--CCCCCCCceeEEEEe----CCeEEE
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI---------------KKRNRVHIEKEILKM--LDHPFLPSLFAEFEA----SHYSRL  128 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~---------------~~~~~~~~E~~~l~~--~~h~~iv~l~~~~~~----~~~~~l  128 (156)
                      ....++|.+.+.||+|+||.||+               .....+..|.+++..  ++||||+++++++.+    ...+++
T Consensus         4 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l   83 (301)
T 3q4u_A            4 RTVARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL   83 (301)
T ss_dssp             CCCGGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred             ccccCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence            34467899999999999999999               223456678887777  799999999998654    346899


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      ||||+++|+|.++++.   ..+++
T Consensus        84 v~e~~~~g~L~~~l~~---~~~~~  104 (301)
T 3q4u_A           84 ITHYHEMGSLYDYLQL---TTLDT  104 (301)
T ss_dssp             EECCCTTCBHHHHHTT---CCBCH
T ss_pred             ehhhccCCCHHHHHhh---cccCH
Confidence            9999999999999965   34554

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.26  E-value=6.7e-12  Score=91.95  Aligned_cols=78  Identities=18%  Similarity=0.296  Sum_probs=65.9

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe----------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe-CCeEEEEE
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI----------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA-SHYSRLVI  130 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~----------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~-~~~~~lv~  130 (156)
                      .+.+..++|++.+.||+|+||.||+                ...+.+.+|+.++..++||||+++++++.. .+.++++|
T Consensus        15 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~   94 (278)
T 1byg_A           15 GWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT   94 (278)
T ss_dssp             CCBCCGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred             cccCChhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence            3456778999999999999999999                234568899999999999999999998654 45799999


Q ss_pred             eccCCCCHHHHHHhc
Q 043174          131 EYCPGGDLLTVSQRQ  145 (156)
Q Consensus       131 E~~~~g~L~~~l~~~  145 (156)
                      ||+++|+|.+++...
T Consensus        95 e~~~~~~L~~~l~~~  109 (278)
T 1byg_A           95 EYMAKGSLVDYLRSR  109 (278)
T ss_dssp             CCCTTEEHHHHHHHH
T ss_pred             ecCCCCCHHHHHHhc
Confidence            999999999999764

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.26  E-value=5.1e-12  Score=98.62  Aligned_cols=79  Identities=20%  Similarity=0.293  Sum_probs=67.5

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC-----Ce
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS-----HY  125 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~-----~~  125 (156)
                      .++|.+.+.||+|+||.||+            |          ..+.+.+|+.+|..++||||+++++++...     ..
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            57899999999999999999            1          224678999999999999999999998776     57


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      +|+||||+. |+|.++++..  +.+++.+
T Consensus       105 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~  130 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKTP--IFLTEEH  130 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSS--CCCCHHH
T ss_pred             EEEEEecCC-cCHHHHHhcc--CCCCHHH
Confidence            999999987 5999999874  5676654

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.26  E-value=2.3e-12  Score=96.45  Aligned_cols=74  Identities=24%  Similarity=0.250  Sum_probs=66.4

Q ss_pred             cCCCeEEEEEeccCCceEEEe-----------c---------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI-----------K---------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~-----------~---------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      ..++|.+.+.||+|+||.||+           |         ....+.+|+.++..++||||+++++++.+....++|||
T Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  107 (326)
T 3uim_A           28 ASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP  107 (326)
T ss_dssp             TTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEE
T ss_pred             HhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEE
Confidence            467899999999999999999           1         12257899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhc
Q 043174          132 YCPGGDLLTVSQRQ  145 (156)
Q Consensus       132 ~~~~g~L~~~l~~~  145 (156)
                      |+++|+|.+++...
T Consensus       108 ~~~~~~L~~~l~~~  121 (326)
T 3uim_A          108 YMANGSVASCLRER  121 (326)
T ss_dssp             CCTTCBHHHHHHCC
T ss_pred             eccCCCHHHHHHhc
Confidence            99999999999875

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.26  E-value=2.6e-12  Score=98.67  Aligned_cols=72  Identities=22%  Similarity=0.276  Sum_probs=61.8

Q ss_pred             CCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEE-eCCeEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFE-ASHYSRL  128 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~-~~~~~~l  128 (156)
                      ..|.+.+.||+|+||.||+                        ...+.+.+|+.++..++||||+++++++. ..+..++
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l  168 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  168 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence            3478889999999999997                        12356889999999999999999999864 4568899


Q ss_pred             EEeccCCCCHHHHHHhc
Q 043174          129 VIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~  145 (156)
                      ||||+++|+|.++++..
T Consensus       169 v~e~~~~g~L~~~l~~~  185 (373)
T 3c1x_A          169 VLPYMKHGDLRNFIRNE  185 (373)
T ss_dssp             EEECCTTCBHHHHHHCT
T ss_pred             EEECCCCCCHHHHHhhc
Confidence            99999999999999864

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.25  E-value=1.2e-12  Score=97.96  Aligned_cols=75  Identities=23%  Similarity=0.301  Sum_probs=67.2

Q ss_pred             ccCCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      ...++|.+.+.||+|+||.||+                   ...+.+.+|+.++..++||||+++++++.+.+.+++|||
T Consensus        36 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  115 (321)
T 2qkw_B           36 EATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYK  115 (321)
T ss_dssp             CCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEE
T ss_pred             HHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEE
Confidence            3468899999999999999999                   224568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhc
Q 043174          132 YCPGGDLLTVSQRQ  145 (156)
Q Consensus       132 ~~~~g~L~~~l~~~  145 (156)
                      |+++|+|.+++...
T Consensus       116 ~~~~~~L~~~l~~~  129 (321)
T 2qkw_B          116 YMENGNLKRHLYGS  129 (321)
T ss_dssp             CCTTCBTGGGSSSS
T ss_pred             cCCCCcHHHHHhcc
Confidence            99999999998754

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.25  E-value=4.8e-12  Score=93.71  Aligned_cols=80  Identities=21%  Similarity=0.314  Sum_probs=63.5

Q ss_pred             CCCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEE--eCCeE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFE--ASHYS  126 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~--~~~~~  126 (156)
                      .++|.+.+.||+|+||.||+                        ...+.+.+|+.++..++||||+++++++.  +...+
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            47899999999999999998                        11246789999999999999999999984  45689


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++||||+++| |.+++.....+.+++.
T Consensus        84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~  109 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSVPEKRFPVC  109 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHSTTCSCCHH
T ss_pred             EEEehhccCC-HHHHHHhCcccccCHH
Confidence            9999999976 8888876544556543

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.25  E-value=9.2e-12  Score=92.53  Aligned_cols=76  Identities=21%  Similarity=0.306  Sum_probs=65.5

Q ss_pred             CccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEe
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEA  122 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~  122 (156)
                      .+..++|.+.+.||+|+||.||+                          ...+.+.+|+.++..+ +||||+++++++..
T Consensus        23 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  102 (316)
T 2xir_A           23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK  102 (316)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred             ecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEec
Confidence            45568899999999999999997                          1234578999999999 79999999999877


Q ss_pred             CC-eEEEEEeccCCCCHHHHHHhc
Q 043174          123 SH-YSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       123 ~~-~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      .+ .++++|||+++|+|.+++...
T Consensus       103 ~~~~~~lv~e~~~~~~L~~~l~~~  126 (316)
T 2xir_A          103 PGGPLMVIVEFCKFGNLSTYLRSK  126 (316)
T ss_dssp             TTSCCEEEEECCTTEEHHHHHHTC
T ss_pred             CCCceEEEEEcCCCCcHHHHHHhc
Confidence            54 599999999999999999875

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.25  E-value=1.4e-11  Score=100.57  Aligned_cols=77  Identities=23%  Similarity=0.301  Sum_probs=63.1

Q ss_pred             CCeEEE-EEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           74 DQFQLF-RRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        74 ~~~~~~-~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      ..+.+. +.||+|+||.||+                        ...+.+.+|+.+|..++|||||++++++.+ +.+++
T Consensus       368 ~~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~l  446 (635)
T 4fl3_A          368 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWML  446 (635)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEE
T ss_pred             hhccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEE
Confidence            334443 4899999999997                        113568999999999999999999999864 55899


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||||+++|+|.++|+..  +.+++.
T Consensus       447 v~E~~~~g~L~~~l~~~--~~l~~~  469 (635)
T 4fl3_A          447 VMEMAELGPLNKYLQQN--RHVKDK  469 (635)
T ss_dssp             EEECCTTEEHHHHHHHC--TTCCHH
T ss_pred             EEEccCCCCHHHHHhhC--CCCCHH
Confidence            99999999999999875  556654

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.24  E-value=1.9e-11  Score=93.38  Aligned_cols=78  Identities=23%  Similarity=0.397  Sum_probs=68.1

Q ss_pred             CCeEEEEEeccCCceEEEe------------c----------------hhhhHHHHHHHHHhC-CCCCCCceeEEEEeCC
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K----------------KRNRVHIEKEILKML-DHPFLPSLFAEFEASH  124 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~----------------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~  124 (156)
                      ++|.+.+.||+|+||.||+            |                ..+.+.+|+.++..+ +||||+++++++....
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  173 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS  173 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred             hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence            5699999999999999999            1                034578899999998 7999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ..++||||++||+|.+++...  ..+++.
T Consensus       174 ~~~lv~e~~~g~~L~~~l~~~--~~l~~~  200 (365)
T 2y7j_A          174 FMFLVFDLMRKGELFDYLTEK--VALSEK  200 (365)
T ss_dssp             EEEEEECCCTTCBHHHHHHHH--SSCCHH
T ss_pred             EEEEEEEeCCCCcHHHHHHhc--CCCCHH
Confidence            999999999999999999875  556554

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.24  E-value=3.8e-11  Score=88.48  Aligned_cols=83  Identities=19%  Similarity=0.247  Sum_probs=70.6

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      ..+..++|.+.+.||+|+||.||+                  ...+.+.+|+.++..+ +|+||+++++++.+....+++
T Consensus         5 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   84 (298)
T 1csn_A            5 NNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV   84 (298)
T ss_dssp             -CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred             CcccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence            345568899999999999999999                  2335689999999999 899999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCC
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |||+ +|+|.+++... ...+++.
T Consensus        85 ~e~~-~~~L~~~l~~~-~~~~~~~  106 (298)
T 1csn_A           85 IDLL-GPSLEDLLDLC-GRKFSVK  106 (298)
T ss_dssp             EECC-CCBHHHHHHHT-TTCCCHH
T ss_pred             EEec-CCCHHHHHHHh-ccCCCHH
Confidence            9999 99999999875 2346554

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.23  E-value=1.2e-11  Score=93.63  Aligned_cols=81  Identities=23%  Similarity=0.372  Sum_probs=65.1

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------ch-------------hhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------KK-------------RNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------~~-------------~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      ..++|.+.+.||+|+||.||+            |.             .+.+.+|+.++..++||||+++++++.+...+
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI   87 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence            357899999999999999999            11             23577899999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      ++||||+++ +|..++... ...+++..
T Consensus        88 ~lv~e~~~~-~l~~~~~~~-~~~~~~~~  113 (346)
T 1ua2_A           88 SLVFDFMET-DLEVIIKDN-SLVLTPSH  113 (346)
T ss_dssp             EEEEECCSE-EHHHHHTTC-CSSCCSSH
T ss_pred             EEEEEcCCC-CHHHHHHhc-CcCCCHHH
Confidence            999999986 899998765 34566654

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.23  E-value=1.4e-11  Score=92.24  Aligned_cols=78  Identities=18%  Similarity=0.284  Sum_probs=63.7

Q ss_pred             CCCeEEEEEeccCCceEEEe---------------chhhhHHHHHHHHHhC--CCCCCCceeEEEEeC----CeEEEEEe
Q 043174           73 LDQFQLFRRLGSGIIRSVYI---------------KKRNRVHIEKEILKML--DHPFLPSLFAEFEAS----HYSRLVIE  131 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~---------------~~~~~~~~E~~~l~~~--~h~~iv~l~~~~~~~----~~~~lv~E  131 (156)
                      .++|++.+.||+|+||.||+               ........|.+++..+  +||||+++++++.+.    ..+++|||
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e  115 (337)
T 3mdy_A           36 AKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITD  115 (337)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEEC
T ss_pred             ccceEEEeEeecCCCeEEEEEEECCceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEe
Confidence            46799999999999999999               1223456676766655  899999999999887    78999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCC
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |+++|+|.++++..   .+++.
T Consensus       116 ~~~~g~L~~~l~~~---~~~~~  134 (337)
T 3mdy_A          116 YHENGSLYDYLKST---TLDAK  134 (337)
T ss_dssp             CCTTCBHHHHHHHC---CBCHH
T ss_pred             ccCCCcHHHHhhcc---CCCHH
Confidence            99999999999763   45543

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.22  E-value=7e-12  Score=92.17  Aligned_cols=81  Identities=23%  Similarity=0.358  Sum_probs=63.2

Q ss_pred             CccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS  123 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~  123 (156)
                      .+..++|++.+.||+|+||.||+                          ...+.+.+|+.++..++||||+++++++.+.
T Consensus        14 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   93 (291)
T 1u46_A           14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP   93 (291)
T ss_dssp             ECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             ccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC
Confidence            44567899999999999999997                          1124577899999999999999999998875


Q ss_pred             CeEEEEEeccCCCCHHHHHHhcCCCCCCC
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      . .+++|||+++|+|.+++... .+.+++
T Consensus        94 ~-~~~v~e~~~~~~L~~~l~~~-~~~~~~  120 (291)
T 1u46_A           94 P-MKMVTELAPLGSLLDRLRKH-QGHFLL  120 (291)
T ss_dssp             S-CEEEEECCTTCBHHHHHHHH-GGGSCH
T ss_pred             C-ceeeEecccCCCHHHHHHhc-cCCcCH
Confidence            5 89999999999999999864 234554

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.22  E-value=1.8e-11  Score=94.32  Aligned_cols=78  Identities=18%  Similarity=0.245  Sum_probs=66.4

Q ss_pred             cCCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCC--CCCCCceeEEEEeCCeEEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLD--HPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~--h~~iv~l~~~~~~~~~~~l  128 (156)
                      ....|.+.+.||+|+||.||+                     ...+.+.+|+.++..+.  ||||+++++++...+.+|+
T Consensus        54 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l  133 (390)
T 2zmd_A           54 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM  133 (390)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             cCCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence            345699999999999999998                     12356889999999995  5999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      ||| +.+|+|.+++.+.  +.+++
T Consensus       134 v~E-~~~~~L~~~l~~~--~~~~~  154 (390)
T 2zmd_A          134 VME-CGNIDLNSWLKKK--KSIDP  154 (390)
T ss_dssp             EEE-CCSEEHHHHHHHC--SSCCH
T ss_pred             EEe-cCCCCHHHHHHhc--CCCCH
Confidence            999 6678999999885  55654

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.22  E-value=2.9e-11  Score=90.82  Aligned_cols=72  Identities=22%  Similarity=0.289  Sum_probs=63.3

Q ss_pred             CCeEEEEEeccCCceEEEe---------------chhhhHHHHHHHHHh--CCCCCCCceeEEEEeCC----eEEEEEec
Q 043174           74 DQFQLFRRLGSGIIRSVYI---------------KKRNRVHIEKEILKM--LDHPFLPSLFAEFEASH----YSRLVIEY  132 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~---------------~~~~~~~~E~~~l~~--~~h~~iv~l~~~~~~~~----~~~lv~E~  132 (156)
                      ++|.+.+.||+|+||.||+               .....+.+|++++..  ++||||+++++++....    .+++||||
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~  121 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY  121 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECC
T ss_pred             ccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEee
Confidence            5699999999999999999               223457889999887  68999999999998876    89999999


Q ss_pred             cCCCCHHHHHHhc
Q 043174          133 CPGGDLLTVSQRQ  145 (156)
Q Consensus       133 ~~~g~L~~~l~~~  145 (156)
                      +++|+|.+++++.
T Consensus       122 ~~~g~L~~~l~~~  134 (342)
T 1b6c_B          122 HEHGSLFDYLNRY  134 (342)
T ss_dssp             CTTCBHHHHHHHC
T ss_pred             cCCCcHHHHHhcc
Confidence            9999999999863

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.22  E-value=3.7e-11  Score=89.92  Aligned_cols=73  Identities=29%  Similarity=0.396  Sum_probs=64.5

Q ss_pred             cCCCeEEEEEeccCCceEEEe-----------------chhhhHHHHHHHHHhCC-CCCCCceeEEEEe--CCeEEEEEe
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI-----------------KKRNRVHIEKEILKMLD-HPFLPSLFAEFEA--SHYSRLVIE  131 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~-----------------~~~~~~~~E~~~l~~~~-h~~iv~l~~~~~~--~~~~~lv~E  131 (156)
                      ..++|++.+.||+|+||.||+                 ...+.+.+|+.++..+. ||||+++++++.+  ...++++||
T Consensus        34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e  113 (330)
T 3nsz_A           34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE  113 (330)
T ss_dssp             EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred             CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence            457899999999999999998                 23457899999999996 9999999999998  677999999


Q ss_pred             ccCCCCHHHHHHh
Q 043174          132 YCPGGDLLTVSQR  144 (156)
Q Consensus       132 ~~~~g~L~~~l~~  144 (156)
                      |+++++|.++++.
T Consensus       114 ~~~~~~l~~~~~~  126 (330)
T 3nsz_A          114 HVNNTDFKQLYQT  126 (330)
T ss_dssp             CCCCCCHHHHGGG
T ss_pred             ccCchhHHHHHHh
Confidence            9999999988754

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.22  E-value=1.6e-11  Score=90.41  Aligned_cols=73  Identities=23%  Similarity=0.372  Sum_probs=62.6

Q ss_pred             CCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           73 LDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      .+.+.....||+|+||.||+                    ...+.+.+|+.++..++||||+++++++.+.+.++++|||
T Consensus        21 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  100 (295)
T 2clq_A           21 YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ  100 (295)
T ss_dssp             BCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence            34444455899999999999                    1245688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhc
Q 043174          133 CPGGDLLTVSQRQ  145 (156)
Q Consensus       133 ~~~g~L~~~l~~~  145 (156)
                      +++|+|.+++...
T Consensus       101 ~~~~~L~~~l~~~  113 (295)
T 2clq_A          101 VPGGSLSALLRSK  113 (295)
T ss_dssp             CSEEEHHHHHHHT
T ss_pred             CCCCCHHHHHHhh
Confidence            9999999999875

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.21  E-value=1.4e-11  Score=92.65  Aligned_cols=80  Identities=21%  Similarity=0.334  Sum_probs=66.1

Q ss_pred             CCeEEE-EEeccCCceEEEe----------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEE
Q 043174           74 DQFQLF-RRLGSGIIRSVYI----------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        74 ~~~~~~-~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      +.|.+. +.||+|+||.||+                      .....+.+|+.++..+ +||||+++++++.+...+++|
T Consensus        28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv  107 (327)
T 3lm5_A           28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILI  107 (327)
T ss_dssp             HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEE
Confidence            346776 8999999999998                      1235688999999998 579999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCC
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |||+++|+|.+++.....+.+++.
T Consensus       108 ~e~~~~~~L~~~~~~~~~~~~~~~  131 (327)
T 3lm5_A          108 LEYAAGGEIFSLCLPELAEMVSEN  131 (327)
T ss_dssp             EECCTTEEGGGGGSSCC-CCCCHH
T ss_pred             EEecCCCcHHHHHHHhcccCCCHH
Confidence            999999999999865434556554

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.20  E-value=1.6e-11  Score=91.23  Aligned_cols=78  Identities=21%  Similarity=0.210  Sum_probs=60.3

Q ss_pred             cCCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEE----------
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFE----------  121 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~----------  121 (156)
                      ..++|.+.+.||+|+||.||+                    ...+.+.+|+.++..++||||+++++++.          
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   88 (320)
T 2i6l_A            9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV   88 (320)
T ss_dssp             ETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred             cCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence            357899999999999999999                    12356789999999999999999999873          


Q ss_pred             ----eCCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          122 ----ASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       122 ----~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                          +...+++||||++ |+|.+++++   +.+++.
T Consensus        89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~  120 (320)
T 2i6l_A           89 GSLTELNSVYIVQEYME-TDLANVLEQ---GPLLEE  120 (320)
T ss_dssp             --CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHH
T ss_pred             ccccccCceeEEeeccC-CCHHHHhhc---CCccHH
Confidence                3468999999998 699999975   456554

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.20  E-value=2.3e-11  Score=90.77  Aligned_cols=79  Identities=25%  Similarity=0.304  Sum_probs=62.3

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      .++|++.+.||+|+||.||+            |          .......|+..+..+ +||||+++++++.+.+.+++|
T Consensus        56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv  135 (311)
T 3p1a_A           56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ  135 (311)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence            36699999999999999998            1          112344555555554 899999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCC
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |||+ +|+|.+++... ...+++.
T Consensus       136 ~e~~-~~~L~~~~~~~-~~~l~~~  157 (311)
T 3p1a_A          136 TELC-GPSLQQHCEAW-GASLPEA  157 (311)
T ss_dssp             EECC-CCBHHHHHHHH-CSCCCHH
T ss_pred             Eecc-CCCHHHHHHhc-CCCCCHH
Confidence            9999 67999998875 3446654

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.19  E-value=2.9e-11  Score=89.62  Aligned_cols=68  Identities=22%  Similarity=0.234  Sum_probs=60.6

Q ss_pred             EEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           78 LFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        78 ~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      ..+.||+|+||.||+                      ...+.+.+|+.++..++||||+++++++.+.+.++++|||+++
T Consensus        35 ~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  114 (307)
T 2nru_A           35 GGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPN  114 (307)
T ss_dssp             TCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             cCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCC
Confidence            347899999999999                      1235688999999999999999999999999999999999999


Q ss_pred             CCHHHHHHhc
Q 043174          136 GDLLTVSQRQ  145 (156)
Q Consensus       136 g~L~~~l~~~  145 (156)
                      |+|.+++...
T Consensus       115 ~~L~~~l~~~  124 (307)
T 2nru_A          115 GSLLDRLSCL  124 (307)
T ss_dssp             CBHHHHHHTG
T ss_pred             CcHHHHHHhc
Confidence            9999999753

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.19  E-value=2.2e-11  Score=92.15  Aligned_cols=80  Identities=20%  Similarity=0.373  Sum_probs=64.9

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEe-------
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEA-------  122 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~-------  122 (156)
                      ..++|.+.+.||+|+||.||+            |          ....+.+|+.++..++||||+++++++.+       
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   94 (351)
T 3mi9_A           15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR   94 (351)
T ss_dssp             BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred             cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence            357899999999999999998            1          12357899999999999999999999887       


Q ss_pred             -CCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          123 -SHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       123 -~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                       .+.+|+||||+++ +|.+.+... ...+++.
T Consensus        95 ~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~  124 (351)
T 3mi9_A           95 CKGSIYLVFDFCEH-DLAGLLSNV-LVKFTLS  124 (351)
T ss_dssp             --CEEEEEEECCSE-EHHHHHHCT-TSCCCHH
T ss_pred             CCceEEEEEeccCC-CHHHHHhhc-cCCCCHH
Confidence             4469999999985 888888764 2446554

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.19  E-value=4.6e-11  Score=88.85  Aligned_cols=76  Identities=20%  Similarity=0.186  Sum_probs=62.9

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS  123 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~  123 (156)
                      ..+..++|.+.+.||+|+||.||+                         ...+.+.+|+.++..++||||+++++++.+.
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~  108 (313)
T 3brb_A           29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM  108 (313)
T ss_dssp             TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred             cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence            345668899999999999999996                         1234588999999999999999999998775


Q ss_pred             C-----eEEEEEeccCCCCHHHHHHh
Q 043174          124 H-----YSRLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       124 ~-----~~~lv~E~~~~g~L~~~l~~  144 (156)
                      .     ..+++|||+++|+|.+++..
T Consensus       109 ~~~~~~~~~~v~e~~~~~~L~~~l~~  134 (313)
T 3brb_A          109 SSQGIPKPMVILPFMKYGDLHTYLLY  134 (313)
T ss_dssp             ------CEEEEEECCTTCBHHHHHHH
T ss_pred             cccCCcccEEEEecccCCCHHHHHHH
Confidence            4     35999999999999999964

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.18  E-value=2.5e-11  Score=93.23  Aligned_cols=77  Identities=27%  Similarity=0.364  Sum_probs=57.4

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCC-CCCCCceeEEEEeCC--eEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLD-HPFLPSLFAEFEASH--YSR  127 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~-h~~iv~l~~~~~~~~--~~~  127 (156)
                      .++|++.+.||+|+||.||+            |          ..+.+.+|+.++..+. ||||+++++++...+  .+|
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~   87 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY   87 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence            57899999999999999998            1          2345778999999997 999999999998654  799


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +||||++ |+|..+++.   +.+++.
T Consensus        88 lv~e~~~-~~L~~~~~~---~~~~~~  109 (388)
T 3oz6_A           88 LVFDYME-TDLHAVIRA---NILEPV  109 (388)
T ss_dssp             EEEECCS-EEHHHHHHH---TCCCHH
T ss_pred             EEecccC-cCHHHHHHc---CCCCHH
Confidence            9999998 599999986   345543

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.18  E-value=4.4e-11  Score=88.84  Aligned_cols=84  Identities=21%  Similarity=0.278  Sum_probs=64.2

Q ss_pred             CccCCCeEEEEEeccCCceEEEe------------ch-------------hhhHHHHHHHHHhCC---CCCCCceeEEEE
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI------------KK-------------RNRVHIEKEILKMLD---HPFLPSLFAEFE  121 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~------------~~-------------~~~~~~E~~~l~~~~---h~~iv~l~~~~~  121 (156)
                      ....++|++.+.||+|+||.||+            |.             ...+.+|+.++..+.   ||||+++++++.
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~   84 (308)
T 3g33_A            5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA   84 (308)
T ss_dssp             -----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred             cccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence            34468899999999999999998            11             135778888887764   999999999998


Q ss_pred             eCC-----eEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          122 ASH-----YSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       122 ~~~-----~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      +..     .++++|||+. |+|.+++.......+++..
T Consensus        85 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~  121 (308)
T 3g33_A           85 TSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAET  121 (308)
T ss_dssp             ECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHH
T ss_pred             ccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHH
Confidence            865     5899999997 5999999886434466543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.18  E-value=1.6e-11  Score=94.14  Aligned_cols=81  Identities=23%  Similarity=0.357  Sum_probs=61.7

Q ss_pred             cCCCeEEEEEeccCCceEEEe----------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe-------------
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI----------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA-------------  122 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~----------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~-------------  122 (156)
                      ..++|.+.+.||+|+||.||+                .......+|+.+++.++||||+++++++..             
T Consensus         5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~   84 (383)
T 3eb0_A            5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPD   84 (383)
T ss_dssp             -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC------------
T ss_pred             ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHHcCCCCccchhheeeecCccccccccccc
Confidence            457899999999999999999                122345689999999999999999998844             


Q ss_pred             -------------------------CCeEEEEEeccCCCCHHHHHHhc--CCCCCCCC
Q 043174          123 -------------------------SHYSRLVIEYCPGGDLLTVSQRQ--RRLRFSIP  153 (156)
Q Consensus       123 -------------------------~~~~~lv~E~~~~g~L~~~l~~~--~~~~~~e~  153 (156)
                                               ...+++||||++ |+|.+.+...  ..+.+++.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~  141 (383)
T 3eb0_A           85 DHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMN  141 (383)
T ss_dssp             -------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHH
T ss_pred             ccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHH
Confidence                                     344899999998 5887777641  12455543

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.18  E-value=1.3e-10  Score=87.08  Aligned_cols=79  Identities=25%  Similarity=0.411  Sum_probs=60.8

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe---------------chhhhHHHHHHHHH--hCCCCCCCceeEEEEe-----CC
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI---------------KKRNRVHIEKEILK--MLDHPFLPSLFAEFEA-----SH  124 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~---------------~~~~~~~~E~~~l~--~~~h~~iv~l~~~~~~-----~~  124 (156)
                      ....+..++|++.+.||+|+||.||+               .....+..|.+++.  .++||||+++++.+..     ..
T Consensus         6 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~   85 (336)
T 3g2f_A            6 SEPSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM   85 (336)
T ss_dssp             ---CCCTTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred             cCCCcChHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence            34567789999999999999999998               12344555655544  4799999999986543     23


Q ss_pred             eEEEEEeccCCCCHHHHHHhc
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      .+++||||+++|+|.++++..
T Consensus        86 ~~~lv~e~~~~g~L~~~l~~~  106 (336)
T 3g2f_A           86 EYLLVMEYYPNGSLXKYLSLH  106 (336)
T ss_dssp             EEEEEECCCTTCBHHHHHHHC
T ss_pred             eEEEEEecCCCCcHHHHHhhc
Confidence            689999999999999999874

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.18  E-value=1.1e-11  Score=94.83  Aligned_cols=77  Identities=22%  Similarity=0.274  Sum_probs=58.9

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCC------
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASH------  124 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~------  124 (156)
                      .+.|.+.+.||+|+||.||+            |          ..+.+.+|+.+++.++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            47799999999999999998            1          1345789999999999999999999998763      


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      .+|+||||+ +++|.++++.   +.+++.
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~---~~l~~~  128 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKH---EKLGED  128 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHH---CCCCHH
T ss_pred             eEEEEEecC-CCCHHHHHhc---CCCCHH
Confidence            469999999 7899999986   456654

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.17  E-value=1.6e-11  Score=92.97  Aligned_cols=80  Identities=24%  Similarity=0.269  Sum_probs=59.6

Q ss_pred             ccCCCeEEEEEeccCCceEEEe---------------c-------------------hhhhHHHHHHHHHhCCCCCCCce
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI---------------K-------------------KRNRVHIEKEILKMLDHPFLPSL  116 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~---------------~-------------------~~~~~~~E~~~l~~~~h~~iv~l  116 (156)
                      +..++|.+.+.||+|+||.||+               |                   ....+.+|+.++..+.||||+++
T Consensus        34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~  113 (345)
T 2v62_A           34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLF  113 (345)
T ss_dssp             TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCE
T ss_pred             ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCccee
Confidence            3457899999999999999998               0                   01235567788888999999999


Q ss_pred             eEEEEe----CCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          117 FAEFEA----SHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       117 ~~~~~~----~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++++.+    ...+|+||||+ +|+|.+++...  +.+++.
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~  151 (345)
T 2v62_A          114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQN--GTFKKS  151 (345)
T ss_dssp             EEEEEEESSSCEEEEEEEECE-EEEHHHHCBGG--GBCCHH
T ss_pred             ecccccccCCCcEEEEEEecc-CCCHHHHHHhc--CCCCHH
Confidence            999988    78899999999 99999999875  456554

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.16  E-value=4e-11  Score=91.31  Aligned_cols=80  Identities=16%  Similarity=0.240  Sum_probs=59.7

Q ss_pred             cCCCeEEEEEeccCCceEEEe-----------------c----hhhhHH---------------HHHHHHHhCCCCCCCc
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI-----------------K----KRNRVH---------------IEKEILKMLDHPFLPS  115 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~-----------------~----~~~~~~---------------~E~~~l~~~~h~~iv~  115 (156)
                      ..++|.+.+.||+|+||.||+                 |    ....+.               .|+..+..++||||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            356899999999999999998                 0    011123               3444555667999999


Q ss_pred             eeEEEEeC----CeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          116 LFAEFEAS----HYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       116 l~~~~~~~----~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +++++...    ..+|+||||+ ||+|.+++... .+.+++.
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~  152 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRK  152 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHH
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHH
Confidence            99988764    4589999999 99999999875 3456654

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.16  E-value=5.2e-11  Score=90.70  Aligned_cols=76  Identities=18%  Similarity=0.168  Sum_probs=64.6

Q ss_pred             CCeEEEEEeccCCceEEEe------------c---------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC-----CeEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K---------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS-----HYSR  127 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~---------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~-----~~~~  127 (156)
                      ++|.+.+.||+|+||.||+            |         ..+.+.+|+.++..++||||+++++++...     ..+|
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  106 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY  106 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence            6899999999999999999            1         225678999999999999999999998765     4699


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++|||+. |+|.++++.   +.+++.
T Consensus       107 iv~e~~~-~~L~~~l~~---~~~~~~  128 (364)
T 3qyz_A          107 IVQDLME-TDLYKLLKT---QHLSND  128 (364)
T ss_dssp             EEEECCS-EEHHHHHHH---CCCCHH
T ss_pred             EEEcccC-cCHHHHHHh---CCCCHH
Confidence            9999998 599999987   356654

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.16  E-value=5.3e-11  Score=88.95  Aligned_cols=85  Identities=19%  Similarity=0.238  Sum_probs=69.0

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCC------CCCceeEEEE
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHP------FLPSLFAEFE  121 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~------~iv~l~~~~~  121 (156)
                      .+....++|++.+.||+|+||.||+                    ...+.+.+|+.++..++|+      +|+++++++.
T Consensus         8 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~   87 (339)
T 1z57_A            8 SGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE   87 (339)
T ss_dssp             TTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE
T ss_pred             cCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc
Confidence            4455568999999999999999998                    1134678899999887655      4999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +.+.+++||||+ +++|.+++.......+++.
T Consensus        88 ~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~  118 (339)
T 1z57_A           88 HHGHICIVFELL-GLSTYDFIKENGFLPFRLD  118 (339)
T ss_dssp             ETTEEEEEEECC-CCBHHHHHHHTTTCCCCHH
T ss_pred             cCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHH
Confidence            999999999999 8899999987633345543

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.16  E-value=2.4e-11  Score=99.82  Aligned_cols=75  Identities=20%  Similarity=0.342  Sum_probs=61.1

Q ss_pred             CccCCCeEEEEEeccCCceEEEe-------------c---------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe--
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI-------------K---------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHY--  125 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~-------------~---------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~--  125 (156)
                      ....++|.+.+.||+|+||.||+             |         ....+.+|+.++..++||||+++++++...+.  
T Consensus        76 ~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  155 (681)
T 2pzi_A           76 DIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHG  155 (681)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTS
T ss_pred             CEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCC
Confidence            44558899999999999999999             1         12357889999999999999999999987655  


Q ss_pred             ---EEEEEeccCCCCHHHHHHh
Q 043174          126 ---SRLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       126 ---~~lv~E~~~~g~L~~~l~~  144 (156)
                         +|+||||++|++|.+++..
T Consensus       156 ~~~~~lv~E~~~g~~L~~~~~~  177 (681)
T 2pzi_A          156 DPVGYIVMEYVGGQSLKRSKGQ  177 (681)
T ss_dssp             CEEEEEEEECCCCEECC----C
T ss_pred             CceeEEEEEeCCCCcHHHHHhC
Confidence               7999999999999887753

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.16  E-value=6.8e-11  Score=89.23  Aligned_cols=82  Identities=21%  Similarity=0.328  Sum_probs=61.6

Q ss_pred             cCCCeEEEE-EeccCCceEEEe------------c---hhhhHHHHHH-HHHhCCCCCCCceeEEEEe----CCeEEEEE
Q 043174           72 GLDQFQLFR-RLGSGIIRSVYI------------K---KRNRVHIEKE-ILKMLDHPFLPSLFAEFEA----SHYSRLVI  130 (156)
Q Consensus        72 ~~~~~~~~~-~lG~G~~g~V~~------------~---~~~~~~~E~~-~l~~~~h~~iv~l~~~~~~----~~~~~lv~  130 (156)
                      ..++|.+.+ .||+|+||.||+            |   .......|+. .+..+.||||+++++++..    ...+++||
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~  105 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIM  105 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEE
Confidence            457899865 699999999998            1   1123344444 3556799999999999887    45689999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||+++|+|.+++.+.....+++.
T Consensus       106 e~~~gg~L~~~l~~~~~~~l~~~  128 (336)
T 3fhr_A          106 ECMEGGELFSRIQERGDQAFTER  128 (336)
T ss_dssp             ECCTTEEHHHHHHTC-CCCCBHH
T ss_pred             eccCCCCHHHHHHhcCCCCCCHH
Confidence            99999999999987633456654

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.15  E-value=1e-10  Score=85.85  Aligned_cols=83  Identities=14%  Similarity=0.175  Sum_probs=63.3

Q ss_pred             CccCCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEE
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR  127 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~  127 (156)
                      .+..++|++.+.||+|+||.||+            |          ..+.+..+...++.++||||+++++++.+.+.++
T Consensus         3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~   82 (290)
T 3fme_A            3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW   82 (290)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEE
T ss_pred             cccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEE
Confidence            45678899999999999999999            1          1122334444577789999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhc--CCCCCCCC
Q 043174          128 LVIEYCPGGDLLTVSQRQ--RRLRFSIP  153 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~--~~~~~~e~  153 (156)
                      +||||++ |+|.+++...  ....+++.
T Consensus        83 lv~e~~~-~~l~~~l~~~~~~~~~~~~~  109 (290)
T 3fme_A           83 ICMELMD-TSLDKFYKQVIDKGQTIPED  109 (290)
T ss_dssp             EEEECCS-EEHHHHHHHHHHTTCCCCHH
T ss_pred             EEEehhc-cchHHHHHHHHhcCCCCCHH
Confidence            9999998 5888877641  12455553

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.15  E-value=1.1e-11  Score=92.16  Aligned_cols=82  Identities=23%  Similarity=0.246  Sum_probs=60.3

Q ss_pred             CccCCCeEEEEEeccCCceEEEe------------c--------------hhhhHHHHHHHHHhC----CCCCCCceeEE
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI------------K--------------KRNRVHIEKEILKML----DHPFLPSLFAE  119 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~------------~--------------~~~~~~~E~~~l~~~----~h~~iv~l~~~  119 (156)
                      ....++|.+.+.||+|+||.||+            |              ....+.+|+.++..+    +|+||++++++
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~  106 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW  106 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence            34467899999999999999999            1              123456799999988    89999999999


Q ss_pred             EEeCCeEEEEEec-cCCCCHHHHHHhcCCCCCCCC
Q 043174          120 FEASHYSRLVIEY-CPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       120 ~~~~~~~~lv~E~-~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +.+.+..+++||+ +.+++|.+++.+.  +.+++.
T Consensus       107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~--~~~~~~  139 (312)
T 2iwi_A          107 FETQEGFMLVLERPLPAQDLFDYITEK--GPLGEG  139 (312)
T ss_dssp             C-----CEEEEECCSSEEEHHHHHHHH--CSCCHH
T ss_pred             EecCCeEEEEEEecCCCCCHHHHHHhc--CCCCHH
Confidence            9999999999999 7899999999875  556654

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.15  E-value=3.8e-11  Score=91.09  Aligned_cols=80  Identities=29%  Similarity=0.292  Sum_probs=65.5

Q ss_pred             cCCCeEEEEEeccCCceEEEe-----------ch-------------------hhhHHHHHHHHHhCCCCCCCceeEEEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI-----------KK-------------------RNRVHIEKEILKMLDHPFLPSLFAEFE  121 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~-----------~~-------------------~~~~~~E~~~l~~~~h~~iv~l~~~~~  121 (156)
                      ..++|.+.+.||+|+||.||+           |.                   .+.+.+|+.++..++||||+++++++.
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   99 (362)
T 3pg1_A           20 MQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV   99 (362)
T ss_dssp             TTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEE
T ss_pred             hccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEE
Confidence            357899999999999999999           11                   156889999999999999999999985


Q ss_pred             e-----CCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          122 A-----SHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       122 ~-----~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      .     ...+|+||||++ |+|.+++... ...+++.
T Consensus       100 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~  134 (362)
T 3pg1_A          100 HFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQ  134 (362)
T ss_dssp             ECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHH
T ss_pred             eccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHH
Confidence            4     336899999998 6999988764 3445543

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.15  E-value=2.4e-11  Score=92.07  Aligned_cols=80  Identities=16%  Similarity=0.107  Sum_probs=65.7

Q ss_pred             CCCeEEEEEeccCCceEEEe---c--------------------hhhhHHHHHHHHHhCCCCCCCc--------------
Q 043174           73 LDQFQLFRRLGSGIIRSVYI---K--------------------KRNRVHIEKEILKMLDHPFLPS--------------  115 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~---~--------------------~~~~~~~E~~~l~~~~h~~iv~--------------  115 (156)
                      .++|.+.+.||+|+||.||+   +                    ..+.+.+|+.++..++||||++              
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~  120 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIP  120 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTSTHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCC
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccchHHHHHHHHHHhcccchhhhhhhhccCCccCcc
Confidence            47899999999999999998   1                    1135889999999999999887              


Q ss_pred             -eeEEEEe-CCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          116 -LFAEFEA-SHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       116 -l~~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                       +++++.. ...+|+||||+ +|+|.+++...+.+.+++.
T Consensus       121 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~  159 (352)
T 2jii_A          121 TCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSER  159 (352)
T ss_dssp             CCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHH
T ss_pred             chhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHH
Confidence             5676665 78899999999 9999999987533456654

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.13  E-value=8.7e-11  Score=87.68  Aligned_cols=80  Identities=23%  Similarity=0.255  Sum_probs=64.8

Q ss_pred             CCCeEEEEEeccCCceEEEe-------------c----------hhhhHHHHHHHHHhC---CCCCCCceeEEEE-----
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-------------K----------KRNRVHIEKEILKML---DHPFLPSLFAEFE-----  121 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-------------~----------~~~~~~~E~~~l~~~---~h~~iv~l~~~~~-----  121 (156)
                      .++|.+.+.||+|+||.||+             |          ....+.+|+.++..+   .||||+++++++.     
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~   89 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   89 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence            47899999999999999998             1          123577888888766   8999999999987     


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ....++++|||+. |+|.+++.......+++.
T Consensus        90 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~  120 (326)
T 1blx_A           90 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTE  120 (326)
T ss_dssp             SEEEEEEEEECCS-CBHHHHHHHSCTTCSCHH
T ss_pred             CCceEEEEEecCC-CCHHHHHHhcccCCCCHH
Confidence            4567999999998 699999987643446554

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.12  E-value=5e-11  Score=91.10  Aligned_cols=83  Identities=20%  Similarity=0.339  Sum_probs=65.8

Q ss_pred             CccCCCeEEEEEeccCCceEEEe------------c-------hhhhHHHHHHHHHhCC--------CCCCCceeEEEE-
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI------------K-------KRNRVHIEKEILKMLD--------HPFLPSLFAEFE-  121 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~------------~-------~~~~~~~E~~~l~~~~--------h~~iv~l~~~~~-  121 (156)
                      ....++|.+.+.||+|+||.||+            |       ..+.+.+|+.++..+.        |+||+++++.+. 
T Consensus        33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~  112 (397)
T 1wak_A           33 DLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI  112 (397)
T ss_dssp             CEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred             hhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence            34458899999999999999999            1       2356788999999885        788999999987 


Q ss_pred             ---eCCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          122 ---ASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       122 ---~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                         +...+|+||||+ +|+|.+.+.+...+.+++.
T Consensus       113 ~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~  146 (397)
T 1wak_A          113 SGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLP  146 (397)
T ss_dssp             EETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHH
T ss_pred             cCCCCceEEEEEecc-CccHHHHHHhcccCCCCHH
Confidence               456899999999 6788888776533456654

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.12  E-value=1.9e-10  Score=87.91  Aligned_cols=71  Identities=25%  Similarity=0.343  Sum_probs=61.1

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCC------
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASH------  124 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~------  124 (156)
                      .++|.+.+.||+|+||.||+            |          ..+.+.+|+.++..++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            57899999999999999998            1          1245789999999999999999999998765      


Q ss_pred             eEEEEEeccCCCCHHHHHHh
Q 043174          125 YSRLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~  144 (156)
                      .+|+||||+++ +|.++++.
T Consensus       104 ~~~lv~e~~~~-~l~~~~~~  122 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQM  122 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHHS
T ss_pred             ceEEEEEcCCC-CHHHHHhh
Confidence            79999999984 78888863

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.11  E-value=1.4e-10  Score=91.43  Aligned_cols=71  Identities=27%  Similarity=0.345  Sum_probs=59.7

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC------C
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS------H  124 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~------~  124 (156)
                      .++|++.+.||+|+||.||+                      ...+.+.+|+.+++.++||||+++++++.+.      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            57899999999999999998                      1234578999999999999999999999764      4


Q ss_pred             eEEEEEeccCCCCHHHHHHh
Q 043174          125 YSRLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~  144 (156)
                      .+|+||||+++ +|.+.+..
T Consensus       141 ~~~lv~E~~~~-~l~~~~~~  159 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQM  159 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHTS
T ss_pred             eEEEEEeCCCC-CHHHHHhh
Confidence            68999999985 57777653

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.11  E-value=9.1e-11  Score=87.33  Aligned_cols=82  Identities=18%  Similarity=0.213  Sum_probs=68.9

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCC--CCCCCceeEEEEeCCe
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLD--HPFLPSLFAEFEASHY  125 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~--h~~iv~l~~~~~~~~~  125 (156)
                      ..+..++|.+.+.||+|+||.||+                     ...+.+.+|+.++..+.  |+||+++++++.+.+.
T Consensus        23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~  102 (313)
T 3cek_A           23 MSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY  102 (313)
T ss_dssp             EEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE
T ss_pred             eeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE
Confidence            345567799999999999999998                     12356789999999996  5999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++++|| +.+|+|.+++...  +.+++.
T Consensus       103 ~~lv~e-~~~~~L~~~l~~~--~~~~~~  127 (313)
T 3cek_A          103 IYMVME-CGNIDLNSWLKKK--KSIDPW  127 (313)
T ss_dssp             EEEEEC-CCSEEHHHHHHHC--SSCCHH
T ss_pred             EEEEEe-cCCCcHHHHHHhc--CCCCHH
Confidence            999999 6678999999875  556543

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.11  E-value=1.2e-10  Score=90.93  Aligned_cols=72  Identities=19%  Similarity=0.266  Sum_probs=62.1

Q ss_pred             CCCeEEEEEeccCCceEEEe-----------c-----hhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-----------K-----KRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-----------~-----~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      ..+|.+.+.||+|+||.|+.           |     ....+.+|+.+++.+ +|||||++++++.+...+|+||||+. 
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-  101 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-  101 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred             cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-
Confidence            44589999999999998655           1     224578999999999 79999999999999999999999997 


Q ss_pred             CCHHHHHHhc
Q 043174          136 GDLLTVSQRQ  145 (156)
Q Consensus       136 g~L~~~l~~~  145 (156)
                      |+|.+++...
T Consensus       102 g~L~~~l~~~  111 (432)
T 3p23_A          102 ATLQEYVEQK  111 (432)
T ss_dssp             EEHHHHHHSS
T ss_pred             CCHHHHHHhc
Confidence            5999999875

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.11  E-value=1.4e-10  Score=87.52  Aligned_cols=78  Identities=26%  Similarity=0.193  Sum_probs=65.1

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------c---------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC-----Ce
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------K---------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS-----HY  125 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------~---------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~-----~~  125 (156)
                      ..++|.+.+.||+|+||.||+            |         ....+.+|+.++..++||||+++++++...     ..
T Consensus         9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   88 (353)
T 2b9h_A            9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE   88 (353)
T ss_dssp             SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred             cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence            357899999999999999999            1         123567899999999999999999987664     67


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++++|||+. |+|.+++..   +.+++.
T Consensus        89 ~~lv~e~~~-~~L~~~~~~---~~~~~~  112 (353)
T 2b9h_A           89 VYIIQELMQ-TDLHRVIST---QMLSDD  112 (353)
T ss_dssp             EEEEECCCS-EEHHHHHHH---CCCCHH
T ss_pred             EEEEEeccC-ccHHHHHhh---cCCCHH
Confidence            999999997 699999986   346543

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.11  E-value=1.9e-10  Score=89.75  Aligned_cols=72  Identities=17%  Similarity=0.236  Sum_probs=61.1

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEEeccCC
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPG  135 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~E~~~~  135 (156)
                      .+.|.+.+.||+|+||.||.                ...+.+.+|+.++..+ +||||+++++++.+...+|+||||+. 
T Consensus        14 ~~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-   92 (434)
T 2rio_A           14 KNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-   92 (434)
T ss_dssp             SSCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred             hheeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence            34566678999999999975                1234578899999876 89999999999999999999999996 


Q ss_pred             CCHHHHHHhc
Q 043174          136 GDLLTVSQRQ  145 (156)
Q Consensus       136 g~L~~~l~~~  145 (156)
                      |+|.+++...
T Consensus        93 gsL~~~l~~~  102 (434)
T 2rio_A           93 LNLQDLVESK  102 (434)
T ss_dssp             EEHHHHHHTC
T ss_pred             CCHHHHHhcc
Confidence            6999999874

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.11  E-value=2.1e-10  Score=89.47  Aligned_cols=81  Identities=17%  Similarity=0.264  Sum_probs=66.5

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------c-------hhhhHHHHHHHHHhC------CCCCCCceeEEEEeCCeE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------K-------KRNRVHIEKEILKML------DHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------~-------~~~~~~~E~~~l~~~------~h~~iv~l~~~~~~~~~~  126 (156)
                      ...+|++.+.||+|+||.||+            |       ..+.+.+|+.++..+      +|+||+++++.+.....+
T Consensus        95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  174 (429)
T 3kvw_A           95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI  174 (429)
T ss_dssp             ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred             ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence            346799999999999999998            1       124577888888876      577999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +++|||+. |+|.+++.......+++.
T Consensus       175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~  200 (429)
T 3kvw_A          175 CMTFELLS-MNLYELIKKNKFQGFSLP  200 (429)
T ss_dssp             EEEECCCC-CBHHHHHHHTTTCCCCHH
T ss_pred             EEEEeccC-CCHHHHHHhccCCCCCHH
Confidence            99999996 699999988643446554

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.10  E-value=9.3e-11  Score=87.80  Aligned_cols=84  Identities=26%  Similarity=0.228  Sum_probs=68.9

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe------------c--------------hhhhHHHHHHHHHhCC--CCCCCceeEE
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI------------K--------------KRNRVHIEKEILKMLD--HPFLPSLFAE  119 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~------------~--------------~~~~~~~E~~~l~~~~--h~~iv~l~~~  119 (156)
                      ......++|++.+.||+|+||.||+            |              ..+.+.+|+.++..+.  |+||++++++
T Consensus        37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~  116 (320)
T 3a99_A           37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW  116 (320)
T ss_dssp             ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred             ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEE
Confidence            3345578899999999999999998            1              1145678999999995  5999999999


Q ss_pred             EEeCCeEEEEEeccCC-CCHHHHHHhcCCCCCCCC
Q 043174          120 FEASHYSRLVIEYCPG-GDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       120 ~~~~~~~~lv~E~~~~-g~L~~~l~~~~~~~~~e~  153 (156)
                      +.+++.++++||++.+ ++|.+++...  +.+++.
T Consensus       117 ~~~~~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~  149 (320)
T 3a99_A          117 FERPDSFVLILERPEPVQDLFDFITER--GALQEE  149 (320)
T ss_dssp             EECSSEEEEEEECCSSEEEHHHHHHHH--CSCCHH
T ss_pred             EecCCcEEEEEEcCCCCccHHHHHhcc--CCCCHH
Confidence            9999999999999986 8999999875  566654

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.10  E-value=3.1e-13  Score=101.86  Aligned_cols=79  Identities=20%  Similarity=0.173  Sum_probs=61.6

Q ss_pred             CCCeEEEEEeccCCceEEEe----------ch----------------hhhHHHHHHHHHhCC---------CCCCCcee
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------KK----------------RNRVHIEKEILKMLD---------HPFLPSLF  117 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------~~----------------~~~~~~E~~~l~~~~---------h~~iv~l~  117 (156)
                      .++|++.+.||+|+||.||+          |.                .+.+.+|+.+++.++         ||||+++.
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~   98 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN   98 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred             cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence            46688899999999999999          11                166889999999885         88888887


Q ss_pred             EEEE------------------------------eCCeEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          118 AEFE------------------------------ASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       118 ~~~~------------------------------~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      +++.                              +...+|+||||+++|++.+.+.+   +.+++..
T Consensus        99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~  162 (336)
T 2vuw_A           99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLAT  162 (336)
T ss_dssp             EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHH
T ss_pred             ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHH
Confidence            7643                              26789999999999987777754   4566543

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.09  E-value=1.4e-11  Score=101.05  Aligned_cols=82  Identities=28%  Similarity=0.406  Sum_probs=65.0

Q ss_pred             CCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe------CCe
Q 043174           73 LDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA------SHY  125 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~------~~~  125 (156)
                      .++|.+.+.||+|+||.||+                     ...+.+.+|+.++..++||||+++++++..      .+.
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            57899999999999999998                     123468889999999999999999998765      667


Q ss_pred             EEEEEeccCCCCHHHHHHhcCC-CCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRR-LRFSIPS  154 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~-~~~~e~~  154 (156)
                      .++||||++||+|.+++..... ..+++..
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~  122 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGP  122 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSSSCTTCCCSSH
T ss_pred             EEEEEEeCCCCCHHHHHHhcccCCCCCHHH
Confidence            8999999999999999987421 2466553

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.08  E-value=4.3e-11  Score=91.57  Aligned_cols=77  Identities=25%  Similarity=0.328  Sum_probs=56.3

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC------C
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS------H  124 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~------~  124 (156)
                      .++|.+.+.||+|+||.||+            |          ..+.+.+|+.+++.++||||+++++++...      .
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            37899999999999999999            1          234577999999999999999999998764      5


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      .+|+++|++ +++|.++++.   +.+++.
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~---~~l~~~  132 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKC---QKLTDD  132 (367)
T ss_dssp             CCEEEEECC-CEECC--------CCCCHH
T ss_pred             eEEEEeccc-CCCHHHHHhc---CCCCHH
Confidence            689999999 6899998876   456554

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.07  E-value=2.2e-10  Score=85.75  Aligned_cols=76  Identities=12%  Similarity=0.266  Sum_probs=60.8

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe------------c---------hhhhHHHHHH-HHHhCCCCCCCceeEEEEeCCe
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI------------K---------KRNRVHIEKE-ILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~------------~---------~~~~~~~E~~-~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      .+.+..++|++.+.||+|+||.||+            |         ....+..|+. +++.++||||+++++++.+.+.
T Consensus        16 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~   95 (327)
T 3aln_A           16 HWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGD   95 (327)
T ss_dssp             EECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSE
T ss_pred             hcccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCc
Confidence            3456778999999999999999998            1         1223455555 5667799999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHh
Q 043174          126 SRLVIEYCPGGDLLTVSQR  144 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~  144 (156)
                      +++||||+++ +|.+++..
T Consensus        96 ~~lv~e~~~~-~l~~~~~~  113 (327)
T 3aln_A           96 CWICMELMST-SFDKFYKY  113 (327)
T ss_dssp             EEEEECCCSE-EHHHHHHH
T ss_pred             eEEEEeecCC-ChHHHHHH
Confidence            9999999985 88887763

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.07  E-value=2.1e-11  Score=93.36  Aligned_cols=77  Identities=10%  Similarity=-0.012  Sum_probs=61.2

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHH---HHHhCCCCCCCcee-------EE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKE---ILKMLDHPFLPSLF-------AE  119 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~---~l~~~~h~~iv~l~-------~~  119 (156)
                      .++|.+.+.||+|+||.||+            |           ..+.+.+|+.   ++..++|||||+++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            47799999999999999998            1           2356789995   45556899999998       77


Q ss_pred             EEeCCe-----------------EEEEEeccCCCCHHHHHHhcCCCCCCC
Q 043174          120 FEASHY-----------------SRLVIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       120 ~~~~~~-----------------~~lv~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      +.+++.                 .|++|||+ +|+|.+++.+.  +.+++
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~--~~~~~  198 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVL--LSHSS  198 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHH--HHTTT
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhc--ccccc
Confidence            776543                 89999999 58999999875  44555

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.05  E-value=1.6e-10  Score=87.77  Aligned_cols=83  Identities=19%  Similarity=0.311  Sum_probs=67.6

Q ss_pred             CccCCCeEEEEEeccCCceEEEe------------c-------hhhhHHHHHHHHHhCC-----------CCCCCceeEE
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI------------K-------KRNRVHIEKEILKMLD-----------HPFLPSLFAE  119 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~------------~-------~~~~~~~E~~~l~~~~-----------h~~iv~l~~~  119 (156)
                      .+..++|.+.+.||+|+||.||+            |       ..+.+.+|+.++..+.           |+||++++++
T Consensus        15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~   94 (373)
T 1q8y_A           15 PYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH   94 (373)
T ss_dssp             EETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred             cccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence            34567899999999999999999            1       2345788999998875           8999999999


Q ss_pred             EEeCC----eEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          120 FEASH----YSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       120 ~~~~~----~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +...+    .++++||++ +++|.+++.....+.+++.
T Consensus        95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~  131 (373)
T 1q8y_A           95 FNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLI  131 (373)
T ss_dssp             EEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHH
T ss_pred             hhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHH
Confidence            88654    799999999 8999999987544456553

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.04  E-value=2.9e-10  Score=84.93  Aligned_cols=82  Identities=23%  Similarity=0.301  Sum_probs=64.4

Q ss_pred             ccCCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCC-CCCCCceeEEEE--------
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLD-HPFLPSLFAEFE--------  121 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~-h~~iv~l~~~~~--------  121 (156)
                      +...+|.+.+.||+|+||.||+                    ...+.+.+|+.++..+. ||||+++++++.        
T Consensus        25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~  104 (337)
T 3ll6_A           25 LGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT  104 (337)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred             ccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence            3445799999999999999999                    12346789999999995 999999999984        


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhcC-CCCCCCC
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQR-RLRFSIP  153 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~~-~~~~~e~  153 (156)
                      ....++++|||+. |+|.+++.... .+.+++.
T Consensus       105 ~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~  136 (337)
T 3ll6_A          105 GQAEFLLLTELCK-GQLVEFLKKMESRGPLSCD  136 (337)
T ss_dssp             SSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHH
T ss_pred             CCceEEEEEEecC-CCHHHHHHHhhccCCCCHH
Confidence            3446899999996 79999987521 2445543

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.04  E-value=3.8e-10  Score=84.86  Aligned_cols=83  Identities=16%  Similarity=0.223  Sum_probs=67.0

Q ss_pred             CccCCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCC------CCceeEEEEeC
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPF------LPSLFAEFEAS  123 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~------iv~l~~~~~~~  123 (156)
                      ....++|.+.+.||+|+||.||+                    ...+.+.+|+.++..+.|++      ++.+++++...
T Consensus        15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~   94 (355)
T 2eu9_A           15 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH   94 (355)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred             ceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence            44568899999999999999998                    12345778999999887655      89999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +.+++||||+ +|+|.+++.......+++.
T Consensus        95 ~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~  123 (355)
T 2eu9_A           95 GHMCIAFELL-GKNTFEFLKENNFQPYPLP  123 (355)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHTTTCCCCHH
T ss_pred             CeEEEEEecc-CCChHHHHHhccCCCCCHH
Confidence            9999999999 6788888877533456554

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.03  E-value=7.4e-10  Score=81.44  Aligned_cols=79  Identities=25%  Similarity=0.381  Sum_probs=64.1

Q ss_pred             CCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEE-EEeCCeEEEEEecc
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAE-FEASHYSRLVIEYC  133 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~-~~~~~~~~lv~E~~  133 (156)
                      .++|++.+.||+|+||.||+                  ...+.+.+|+.++..+.|++++..+.. .......+++|||+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   87 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence            57899999999999999999                  123568999999999988876666554 46688899999999


Q ss_pred             CCCCHHHHHHhcCCCCCCCC
Q 043174          134 PGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~~e~  153 (156)
                       +|+|.+++... .+.+++.
T Consensus        88 -~~~L~~~~~~~-~~~~~~~  105 (296)
T 3uzp_A           88 -GPSLEDLFNFC-SRKFSLK  105 (296)
T ss_dssp             -CCBHHHHHHHT-TTCCCHH
T ss_pred             -CCCHHHHHHhh-ccCCCHH
Confidence             89999999854 2456654

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.02  E-value=6.8e-10  Score=81.56  Aligned_cols=79  Identities=25%  Similarity=0.381  Sum_probs=61.5

Q ss_pred             CCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEE-EEeCCeEEEEEecc
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAE-FEASHYSRLVIEYC  133 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~-~~~~~~~~lv~E~~  133 (156)
                      .++|.+.+.||+|+||.||+                  .....+.+|+.++..+.|++++..+.. +......+++|||+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   87 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc
Confidence            47799999999999999999                  123468999999999988877766654 46788899999999


Q ss_pred             CCCCHHHHHHhcCCCCCCCC
Q 043174          134 PGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~~e~  153 (156)
                       +|+|.+++... .+.+++.
T Consensus        88 -~~~L~~~~~~~-~~~~~~~  105 (296)
T 4hgt_A           88 -GPSLEDLFNFC-SRKFSLK  105 (296)
T ss_dssp             -CCBHHHHHHHT-TSCCCHH
T ss_pred             -CCCHHHHHHHh-cCCCCHH
Confidence             89999999854 2456554

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.02  E-value=3.9e-10  Score=83.78  Aligned_cols=82  Identities=18%  Similarity=0.264  Sum_probs=55.1

Q ss_pred             CccCCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEE
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR  127 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~  127 (156)
                      ....++|++.+.||+|+||.||+            |          ..+.+..+..++..++||||+++++++.+.+.++
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~  100 (318)
T 2dyl_A           21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVF  100 (318)
T ss_dssp             ECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             hhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEE
Confidence            34567899999999999999999            1          1122344445677789999999999999999999


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +||||+ ++.+..++... .+.+++.
T Consensus       101 lv~e~~-~~~~~~l~~~~-~~~~~~~  124 (318)
T 2dyl_A          101 IAMELM-GTCAEKLKKRM-QGPIPER  124 (318)
T ss_dssp             EEECCC-SEEHHHHHHHH-TSCCCHH
T ss_pred             EEEecc-CCcHHHHHHHh-ccCCCHH
Confidence            999999 45555555432 3456543

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.01  E-value=2.2e-10  Score=88.35  Aligned_cols=71  Identities=23%  Similarity=0.379  Sum_probs=56.4

Q ss_pred             ccCCCeEEEEEeccCCceEEEe---------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC------eEEEE
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI---------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH------YSRLV  129 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~---------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~------~~~lv  129 (156)
                      ....+|.+.+.||+|+||.||+               +......+|+.+++.++||||+++++++...+      .+++|
T Consensus        37 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv  116 (394)
T 4e7w_A           37 QREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV  116 (394)
T ss_dssp             EEEEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred             cccceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence            3456799999999999999998               12233567999999999999999999986543      38999


Q ss_pred             EeccCCCCHHHHH
Q 043174          130 IEYCPGGDLLTVS  142 (156)
Q Consensus       130 ~E~~~~g~L~~~l  142 (156)
                      |||+++ ++...+
T Consensus       117 ~e~~~~-~l~~~~  128 (394)
T 4e7w_A          117 LEYVPE-TVYRAS  128 (394)
T ss_dssp             EECCSE-EHHHHH
T ss_pred             eeccCc-cHHHHH
Confidence            999986 444444

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.99  E-value=7.2e-10  Score=84.92  Aligned_cols=83  Identities=20%  Similarity=0.283  Sum_probs=66.3

Q ss_pred             CccCCCeEEEEEeccCCceEEEe------------c-------hhhhHHHHHHHHHhCC-CC-----CCCceeEEEEeCC
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI------------K-------KRNRVHIEKEILKMLD-HP-----FLPSLFAEFEASH  124 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~------------~-------~~~~~~~E~~~l~~~~-h~-----~iv~l~~~~~~~~  124 (156)
                      ....++|.+.+.||+|+||.||+            |       ....+.+|+.++..+. |+     +|+++++.+...+
T Consensus        50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  129 (382)
T 2vx3_A           50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN  129 (382)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred             CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence            34468899999999999999999            1       1245677888888774 55     4999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      .+|+||||+. |+|.+++.....+.+++.
T Consensus       130 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~  157 (382)
T 2vx3_A          130 HLCLVFEMLS-YNLYDLLRNTNFRGVSLN  157 (382)
T ss_dssp             EEEEEEECCC-CBHHHHHHHTTTSCCCHH
T ss_pred             ceEEEEecCC-CCHHHHHhhcCcCCCCHH
Confidence            9999999996 599999987633445543

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=98.99  E-value=5.5e-10  Score=85.32  Aligned_cols=70  Identities=24%  Similarity=0.259  Sum_probs=60.3

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE----
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS----  126 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~----  126 (156)
                      .++|.+.+.||+|+||.||+            |          ..+.+.+|+.++..++||||+++++++......    
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            37899999999999999998            1          135678999999999999999999999887655    


Q ss_pred             --EEEEeccCCCCHHHHHH
Q 043174          127 --RLVIEYCPGGDLLTVSQ  143 (156)
Q Consensus       127 --~lv~E~~~~g~L~~~l~  143 (156)
                        |+||||+. |+|.+++.
T Consensus       121 ~~~lv~e~~~-~~l~~~~~  138 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMG  138 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTT
T ss_pred             eEEEEEcccc-ccHHHHhh
Confidence              99999998 68888774

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=98.97  E-value=3.7e-10  Score=85.43  Aligned_cols=70  Identities=30%  Similarity=0.412  Sum_probs=46.5

Q ss_pred             CCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe-------E
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY-------S  126 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~-------~  126 (156)
                      .++|.+.+.||+|+||.||+                   ........++..+..++||||+++++++...+.       +
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~  101 (360)
T 3e3p_A           22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYL  101 (360)
T ss_dssp             HTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeE
Confidence            57899999999999999998                   123356777888888999999999999876443       8


Q ss_pred             EEEEeccCCCCHHHHHH
Q 043174          127 RLVIEYCPGGDLLTVSQ  143 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~  143 (156)
                      ++||||+++ +|...+.
T Consensus       102 ~lv~e~~~~-~l~~~~~  117 (360)
T 3e3p_A          102 NVVMEYVPD-TLHRCCR  117 (360)
T ss_dssp             EEEEECCSC-BHHHHHH
T ss_pred             EEEeecccc-cHHHHHH
Confidence            999999986 5555544

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.96  E-value=7.1e-10  Score=86.21  Aligned_cols=71  Identities=25%  Similarity=0.372  Sum_probs=56.7

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC------CeEEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS------HYSRLVI  130 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~------~~~~lv~  130 (156)
                      ...|.+.+.||+|+||.||+                +......+|+.+|+.++||||+++++++...      ..+++||
T Consensus        53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~  132 (420)
T 1j1b_A           53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL  132 (420)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEE
T ss_pred             cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeeh
Confidence            45699999999999999999                1123456899999999999999999988542      2477999


Q ss_pred             eccCCCCHHHHHHh
Q 043174          131 EYCPGGDLLTVSQR  144 (156)
Q Consensus       131 E~~~~g~L~~~l~~  144 (156)
                      ||+++ +|...+..
T Consensus       133 e~~~~-~l~~~~~~  145 (420)
T 1j1b_A          133 DYVPE-TVYRVARH  145 (420)
T ss_dssp             ECCCE-EHHHHHHH
T ss_pred             hcccc-cHHHHHHH
Confidence            99985 77776653

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=98.96  E-value=7.9e-10  Score=85.31  Aligned_cols=70  Identities=27%  Similarity=0.348  Sum_probs=53.4

Q ss_pred             CCeEE-EEEeccCCceEEEe--------------c------hhhhHHHHHHHHHhCCCCCCCceeEEEEe--CCeEEEEE
Q 043174           74 DQFQL-FRRLGSGIIRSVYI--------------K------KRNRVHIEKEILKMLDHPFLPSLFAEFEA--SHYSRLVI  130 (156)
Q Consensus        74 ~~~~~-~~~lG~G~~g~V~~--------------~------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~--~~~~~lv~  130 (156)
                      +.|.+ .++||+|+||.||+              |      ....+.+|+.+|+.++||||+++++++.+  ...+|+||
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~   99 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF   99 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence            44666 45799999999998              1      12368899999999999999999999965  67899999


Q ss_pred             eccCCCCHHHHHHh
Q 043174          131 EYCPGGDLLTVSQR  144 (156)
Q Consensus       131 E~~~~g~L~~~l~~  144 (156)
                      ||+. |+|.+++..
T Consensus       100 e~~~-~~l~~~~~~  112 (405)
T 3rgf_A          100 DYAE-HDLWHIIKF  112 (405)
T ss_dssp             ECCS-EEHHHHHHH
T ss_pred             eCCC-CCHHHHHHH
Confidence            9997 589888864

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.94  E-value=4.1e-10  Score=90.39  Aligned_cols=66  Identities=17%  Similarity=0.195  Sum_probs=48.6

Q ss_pred             EEEeccCCceEEEe----------c----------------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           79 FRRLGSGIIRSVYI----------K----------------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        79 ~~~lG~G~~g~V~~----------~----------------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      .+.||+|+||.||+          +                ..+.+.+|+.++..++||||+++..+..+....|+||||
T Consensus       341 ~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~  420 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSY  420 (540)
T ss_dssp             -------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEEC
T ss_pred             CCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEEC
Confidence            56899999999995          1                123478999999999999999655555577778999999


Q ss_pred             cCCCCHHHHHHh
Q 043174          133 CPGGDLLTVSQR  144 (156)
Q Consensus       133 ~~~g~L~~~l~~  144 (156)
                      ++||+|.+++++
T Consensus       421 ~~ggsL~~~l~~  432 (540)
T 3en9_A          421 INGKLAKDVIED  432 (540)
T ss_dssp             CCSEEHHHHSTT
T ss_pred             CCCCCHHHHHHH
Confidence            999999998764

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.94  E-value=6.4e-10  Score=84.85  Aligned_cols=71  Identities=15%  Similarity=0.105  Sum_probs=46.8

Q ss_pred             CCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhC--CCCCCCcee-------EEEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKML--DHPFLPSLF-------AEFE  121 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~--~h~~iv~l~-------~~~~  121 (156)
                      .+|.+.+.||+|+||.||+                       ...+.+.+|+.++..+  +||||++++       +++.
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            4589999999999999999                       1234567785545444  699988755       5555


Q ss_pred             eC-----------------CeEEEEEeccCCCCHHHHHHhc
Q 043174          122 AS-----------------HYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       122 ~~-----------------~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      .+                 ..+|+||||++ |+|.+++...
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~  181 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL  181 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh
Confidence            43                 33899999999 8999999874

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=98.93  E-value=7.3e-10  Score=83.86  Aligned_cols=70  Identities=24%  Similarity=0.255  Sum_probs=59.4

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe-----
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHY-----  125 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~-----  125 (156)
                      .++|.+.+.||+|+||.||+            |          ..+.+.+|+.++..++||||+++++++.+...     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            37899999999999999999            1          13457889999999999999999999987654     


Q ss_pred             -EEEEEeccCCCCHHHHHH
Q 043174          126 -SRLVIEYCPGGDLLTVSQ  143 (156)
Q Consensus       126 -~~lv~E~~~~g~L~~~l~  143 (156)
                       +|++|||+. |+|.+++.
T Consensus       103 ~~~lv~e~~~-~~l~~~~~  120 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMG  120 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTT
T ss_pred             eEEEEecccc-CCHHHHhc
Confidence             599999998 58877764

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.93  E-value=1.9e-09  Score=87.08  Aligned_cols=56  Identities=21%  Similarity=0.169  Sum_probs=51.1

Q ss_pred             hhhHHHHHHHHHhC-CCCCCCceeEEEEeCCeEEEEEeccCCCCHHHHHHhcCCCCCCC
Q 043174           95 RNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus        95 ~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e  152 (156)
                      .+.+.+|+++|+.+ .|+||+++++++++++.+||||||++||+|.++|++.  +.+++
T Consensus       285 ~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~--~~l~~  341 (569)
T 4azs_A          285 KYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAG--EEIDR  341 (569)
T ss_dssp             HHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTT--CCCCH
T ss_pred             HHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhC--CCCCH
Confidence            45699999999999 7999999999999999999999999999999999885  66654

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.92  E-value=1.9e-09  Score=85.43  Aligned_cols=80  Identities=23%  Similarity=0.329  Sum_probs=64.6

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCC-CCCCceeEEEEeCCeEEEEEec
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDH-PFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h-~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      ..++|.+.+.||+|+||.||+                  .....+..|+.++..+.| ++|..+..+.......++||||
T Consensus         5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~   84 (483)
T 3sv0_A            5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL   84 (483)
T ss_dssp             ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence            357899999999999999999                  123468999999999976 5566666667778899999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCC
Q 043174          133 CPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      + +|+|.+++... .+.+++.
T Consensus        85 ~-g~sL~~ll~~~-~~~l~~~  103 (483)
T 3sv0_A           85 L-GPSLEDLFNFC-SRKLSLK  103 (483)
T ss_dssp             C-CCBHHHHHHHT-TTCCCHH
T ss_pred             C-CCCHHHHHHhh-cCCCCHH
Confidence            9 89999999864 2456654

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.39  E-value=4e-07  Score=67.22  Aligned_cols=60  Identities=15%  Similarity=0.122  Sum_probs=47.4

Q ss_pred             EEEEEeccCCceEEEe-----------ch--------------------------hhhHHHHHHHHHhCCCCCCCceeEE
Q 043174           77 QLFRRLGSGIIRSVYI-----------KK--------------------------RNRVHIEKEILKMLDHPFLPSLFAE  119 (156)
Q Consensus        77 ~~~~~lG~G~~g~V~~-----------~~--------------------------~~~~~~E~~~l~~~~h~~iv~l~~~  119 (156)
                      .+.+.||+|+||.||+           |.                          ...+.+|+.++..++  | ++++++
T Consensus        93 ~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~  169 (282)
T 1zar_A           93 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKV  169 (282)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCE
T ss_pred             EecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeE
Confidence            3449999999999998           11                          234789999999998  4 666665


Q ss_pred             EEeCCeEEEEEeccCCCCHHH
Q 043174          120 FEASHYSRLVIEYCPGGDLLT  140 (156)
Q Consensus       120 ~~~~~~~~lv~E~~~~g~L~~  140 (156)
                      +.. +..|+||||++||+|.+
T Consensus       170 ~~~-~~~~lvmE~~~g~~L~~  189 (282)
T 1zar_A          170 YAW-EGNAVLMELIDAKELYR  189 (282)
T ss_dssp             EEE-ETTEEEEECCCCEEGGG
T ss_pred             Eec-cceEEEEEecCCCcHHH
Confidence            544 55699999999999987

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.44  E-value=0.00051  Score=49.32  Aligned_cols=69  Identities=16%  Similarity=0.181  Sum_probs=56.3

Q ss_pred             CCCeEEEEEeccCCceEEEe----------ch--------hhhHHHHHHHHHhCC-CCCCCceeEEEEeCCeEEEEEecc
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------KK--------RNRVHIEKEILKMLD-HPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------~~--------~~~~~~E~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      ++.|.+...+|.|+.+.||+          |.        ...+.+|+.++..+. +..+.+++++..+.+..|+||||+
T Consensus        13 l~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i   92 (263)
T 3tm0_A           13 IEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEA   92 (263)
T ss_dssp             HTTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC
T ss_pred             hccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEec
Confidence            35688888888888888887          11        235899999999884 677889999998999999999999


Q ss_pred             CCCCHHHH
Q 043174          134 PGGDLLTV  141 (156)
Q Consensus       134 ~~g~L~~~  141 (156)
                      +|.+|.+.
T Consensus        93 ~G~~l~~~  100 (263)
T 3tm0_A           93 DGVLCSEE  100 (263)
T ss_dssp             SSEEHHHH
T ss_pred             CCeehhhc
Confidence            99988764

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=97.44  E-value=0.00016  Score=55.80  Aligned_cols=38  Identities=13%  Similarity=-0.035  Sum_probs=30.8

Q ss_pred             CCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCC
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDH  110 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h  110 (156)
                      ..+|.+.+.||+|+||.||+                       +..+.+.+|+.++..+.|
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~  137 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG  137 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence            34588899999999999999                       124567899999999876

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.35  E-value=0.00023  Score=55.03  Aligned_cols=64  Identities=19%  Similarity=0.182  Sum_probs=40.6

Q ss_pred             eEEEEEeccCCceEEEe-----------ch----------------------h--------hhHHHHHHHHHhCCCCCCC
Q 043174           76 FQLFRRLGSGIIRSVYI-----------KK----------------------R--------NRVHIEKEILKMLDHPFLP  114 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~-----------~~----------------------~--------~~~~~E~~~l~~~~h~~iv  114 (156)
                      |.+...||.|+||.||+           |.                      .        -+...|...|..+.+.++.
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~  176 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP  176 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            89999999999999999           10                      0        0123466666666544432


Q ss_pred             ceeEEEEeCCeEEEEEeccCCCCHHHH
Q 043174          115 SLFAEFEASHYSRLVIEYCPGGDLLTV  141 (156)
Q Consensus       115 ~l~~~~~~~~~~~lv~E~~~~g~L~~~  141 (156)
                      - ...+.... .++||||++|++|..+
T Consensus       177 v-p~p~~~~~-~~LVME~i~G~~L~~l  201 (397)
T 4gyi_A          177 V-PEPIAQSR-HTIVMSLVDALPMRQV  201 (397)
T ss_dssp             C-CCEEEEET-TEEEEECCSCEEGGGC
T ss_pred             C-CeeeeccC-ceEEEEecCCccHhhh
Confidence            2 22222222 3699999999887543

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.29  E-value=0.00021  Score=51.74  Aligned_cols=63  Identities=13%  Similarity=0.094  Sum_probs=44.8

Q ss_pred             eEEEEEeccCCceEEEe--------c------h-------h-------------------------hhHHHHHHHHHhCC
Q 043174           76 FQLFRRLGSGIIRSVYI--------K------K-------R-------------------------NRVHIEKEILKMLD  109 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~--------~------~-------~-------------------------~~~~~E~~~l~~~~  109 (156)
                      |.+.+.||+|+||.||+        .      .       .                         ..+.+|+.+|..+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            67889999999999998        1      0       0                         14678999999998


Q ss_pred             CCCC--CceeEEEEeCCeEEEEEeccCC-C----CHHHHH
Q 043174          110 HPFL--PSLFAEFEASHYSRLVIEYCPG-G----DLLTVS  142 (156)
Q Consensus       110 h~~i--v~l~~~~~~~~~~~lv~E~~~~-g----~L~~~l  142 (156)
                      |+++  ..++..    ...++||||+.+ |    .|.+.+
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~  164 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELG  164 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHG
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHh
Confidence            7764  333332    346899999942 4    566554

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.45  E-value=0.0061  Score=43.15  Aligned_cols=67  Identities=18%  Similarity=0.148  Sum_probs=47.3

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------chhhhHHHHHHHHHhCCCCC--CCceeEEEEeCCeEEEEEeccC
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------KKRNRVHIEKEILKMLDHPF--LPSLFAEFEASHYSRLVIEYCP  134 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------~~~~~~~~E~~~l~~~~h~~--iv~l~~~~~~~~~~~lv~E~~~  134 (156)
                      ...+.+....+.|..+.||+                .....+.+|+.++..+.+.+  +.++++...+.+..+++|||++
T Consensus        19 ~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~   98 (264)
T 1nd4_A           19 LFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP   98 (264)
T ss_dssp             TTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred             cCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcccchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecC
Confidence            34556544434555677776                11245789999999885434  5668888887888999999999


Q ss_pred             CCCHH
Q 043174          135 GGDLL  139 (156)
Q Consensus       135 ~g~L~  139 (156)
                      |.+|.
T Consensus        99 G~~l~  103 (264)
T 1nd4_A           99 GQDLL  103 (264)
T ss_dssp             SEETT
T ss_pred             CcccC
Confidence            98774

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=95.33  E-value=0.019  Score=43.04  Aligned_cols=61  Identities=13%  Similarity=0.252  Sum_probs=45.7

Q ss_pred             EEEEeccCCceEEEe----------ch-----------hhhHHHHHHHHHhCC--CCCCCceeEEEEeC---CeEEEEEe
Q 043174           78 LFRRLGSGIIRSVYI----------KK-----------RNRVHIEKEILKMLD--HPFLPSLFAEFEAS---HYSRLVIE  131 (156)
Q Consensus        78 ~~~~lG~G~~g~V~~----------~~-----------~~~~~~E~~~l~~~~--h~~iv~l~~~~~~~---~~~~lv~E  131 (156)
                      .++.|+.|.++.||+          +.           ...+.+|..++..+.  +..+.+++..+.+.   +..|+|||
T Consensus        42 ~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme  121 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME  121 (359)
T ss_dssp             EEEECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred             eEEEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence            467789999888888          11           236788999999886  45678888877765   45899999


Q ss_pred             ccCCCCH
Q 043174          132 YCPGGDL  138 (156)
Q Consensus       132 ~~~~g~L  138 (156)
                      |++|..+
T Consensus       122 ~v~G~~l  128 (359)
T 3dxp_A          122 FVSGRVL  128 (359)
T ss_dssp             CCCCBCC
T ss_pred             ecCCeec
Confidence            9998776

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=93.29  E-value=0.3  Score=36.25  Aligned_cols=62  Identities=18%  Similarity=0.202  Sum_probs=47.6

Q ss_pred             EEEEEeccCCceEEEe---------------chhhhHHHHHHHHHhCC---CCCCCceeEEEEeCCeEEEEEeccCCCCH
Q 043174           77 QLFRRLGSGIIRSVYI---------------KKRNRVHIEKEILKMLD---HPFLPSLFAEFEASHYSRLVIEYCPGGDL  138 (156)
Q Consensus        77 ~~~~~lG~G~~g~V~~---------------~~~~~~~~E~~~l~~~~---h~~iv~l~~~~~~~~~~~lv~E~~~~g~L  138 (156)
                      .-.+.|+.|....+|+               .....+..|...|..+.   ...+.+.+.+..+.+..++||||++|..+
T Consensus        39 ~~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~  118 (312)
T 3jr1_A           39 KHKEKLYSGEMNEIWLINDEVQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN  118 (312)
T ss_dssp             CEEEEECCSSSSEEEEEESSSCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred             eeeEEeCCccceeeeEEEECCCeEEEEeCCcccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence            3456788888888887               12345788999998873   35677888887778889999999998764

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=91.13  E-value=1.8  Score=30.55  Aligned_cols=48  Identities=23%  Similarity=0.182  Sum_probs=38.0

Q ss_pred             hhhHHHHHHHHHhCC-CCCCCceeEEEEeCCeEEEEEeccCCCCHHHHH
Q 043174           95 RNRVHIEKEILKMLD-HPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVS  142 (156)
Q Consensus        95 ~~~~~~E~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l  142 (156)
                      ...+.+|..+|..+. +--+.+++.+..+++..++|||+++|.++.+..
T Consensus        63 ~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~  111 (272)
T 4gkh_A           63 ANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVL  111 (272)
T ss_dssp             HHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHH
T ss_pred             HhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccc
Confidence            345788999998774 334667888888999999999999998776654

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=88.24  E-value=1.3  Score=32.28  Aligned_cols=62  Identities=15%  Similarity=0.114  Sum_probs=43.1

Q ss_pred             EEEeccCCceEEEe-------------chhhhHHHHHHHHHhCCCC---CCCceeEEEE-eCCeEEEEEeccCCCCHHH
Q 043174           79 FRRLGSGIIRSVYI-------------KKRNRVHIEKEILKMLDHP---FLPSLFAEFE-ASHYSRLVIEYCPGGDLLT  140 (156)
Q Consensus        79 ~~~lG~G~~g~V~~-------------~~~~~~~~E~~~l~~~~h~---~iv~l~~~~~-~~~~~~lv~E~~~~g~L~~  140 (156)
                      ++.++.|....||+             .....+.+|..+|..+.+.   .+.+.+.+.. ..+..+++||+++|..|..
T Consensus        24 v~~l~~G~~n~v~~vg~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~  102 (306)
T 3tdw_A           24 VESLGEGFRNYAILVNGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGE  102 (306)
T ss_dssp             EEEEEECSSEEEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECHH
T ss_pred             eeecCCCcceeEEEECCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECch
Confidence            34567787777877             1235688999999998642   2445555543 3455789999999988765

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=86.32  E-value=2.2  Score=30.61  Aligned_cols=61  Identities=15%  Similarity=0.106  Sum_probs=41.2

Q ss_pred             CCeEEEEEeccCCceEEEe-----------c--------hhhhHHHHHHHHHhCCCC---CCCceeEEEEeCCeEEEEEe
Q 043174           74 DQFQLFRRLGSGIIRSVYI-----------K--------KRNRVHIEKEILKMLDHP---FLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~-----------~--------~~~~~~~E~~~l~~~~h~---~iv~l~~~~~~~~~~~lv~E  131 (156)
                      ....-++.+|.|..+.||+           |        ....+..|...|..+...   -+.+.++.  +.  -+++||
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~--~~lv~e   90 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD--RTLAME   90 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET--TEEEEE
T ss_pred             CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--cC--ceEEEE
Confidence            4456678899999999998           1        123578899999988432   23344432  22  368999


Q ss_pred             ccCCCCH
Q 043174          132 YCPGGDL  138 (156)
Q Consensus       132 ~~~~g~L  138 (156)
                      |++++..
T Consensus        91 ~l~~~~~   97 (288)
T 3f7w_A           91 WVDERPP   97 (288)
T ss_dssp             CCCCCCC
T ss_pred             eecccCC
Confidence            9987753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	156
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	7e-10
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-09
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-09
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-09
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-08
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-08
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-08
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	7e-08
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	7e-08
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-07
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-07
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	4e-07
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	4e-07
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	6e-07
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	7e-07
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	8e-07
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	9e-07
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-06
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-06
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-06
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-06
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-06
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-06
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	4e-06
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	7e-06
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	8e-06
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	8e-06
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	8e-06
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	9e-06
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-05
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-05
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-05
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-05
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-05
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-05
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-05
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	4e-05
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	5e-05
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	6e-05
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	7e-05
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-04
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-04
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-04
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-04
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	5e-04
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	6e-04
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	7e-04
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	0.001
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	0.002
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	0.002
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	0.003

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 7e-10
 Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 21/96 (21%)

Query: 74  DQFQLFRRLGSGIIRSVY------------IKK---------RNRVHIEKEILKMLDHPF 112
           D F+    LG+G    V+             K          RN++  E ++L   + P+
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65

Query: 113 LPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
           +   +  F +     + +E+  GG L  V ++  R+
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI 101

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 53.5 bits (128), Expect = 1e-09
 Identities = 21/111 (18%), Positives = 43/111 (38%), Gaps = 21/111 (18%)

Query: 57  KRAMNKLLQQEHGQVGLDQFQLFRRLGSG--------------------IIRSVYIKKRN 96
           K+   + ++ +H  V LD + +   LG+G                     + + +   + 
Sbjct: 10  KQYYPQPVEIKHDHV-LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE 68

Query: 97  RVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRR 147
            V  E + + +L HP L +L   FE  +   ++ E+  GG+L      +  
Sbjct: 69  TVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN 119

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 53.1 bits (127), Expect = 1e-09
 Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 20/95 (21%)

Query: 73  LDQFQLFRRLGSG--------------------IIRSVYIKKRNRVHIEKEILKMLDHPF 112
            D + +   LGSG                     I + Y   +  V  E  I+  L HP 
Sbjct: 28  YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPK 87

Query: 113 LPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRR 147
           L +L   FE  +   L++E+  GG+L      +  
Sbjct: 88  LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY 122

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 51.6 bits (123), Expect = 4e-09
 Identities = 16/96 (16%), Positives = 32/96 (33%), Gaps = 21/96 (21%)

Query: 74  DQFQLFRRLGSG---------------------IIRSVYIKKRNRVHIEKEILKMLDHPF 112
           D +     LG+G                     I +     K   +  E  +L  + HP 
Sbjct: 9   DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPN 68

Query: 113 LPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
           + +L   +E+  +  L+++   GG+L      +   
Sbjct: 69  IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFY 104

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 1e-08
 Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 20/94 (21%)

Query: 74  DQFQLFRRLGSG--------------------IIRSVYIKKRNRVHIEKEILKMLDHPFL 113
           D +++   LG G                    +I +   ++     +E +IL   DHP +
Sbjct: 12  DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 71

Query: 114 PSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRR 147
             L   F   +   ++IE+C GG +  V     R
Sbjct: 72  VKLLDAFYYENNLWILIEFCAGGAVDAVMLELER 105

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (117), Expect = 2e-08
 Identities = 17/102 (16%), Positives = 30/102 (29%), Gaps = 17/102 (16%)

Query: 71  VGLDQFQLFRRLGSGIIRSVY----------IKK------RNRVHIEKEILKMLDHPFLP 114
           + + + +L + +G G    V           +K             E  ++  L H  L 
Sbjct: 4   LNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLV 63

Query: 115 SLF-AEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
            L     E      +V EY   G L+   + + R        
Sbjct: 64  QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL 105

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (117), Expect = 3e-08
 Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 23/98 (23%)

Query: 74  DQFQLFRRLGSGIIRSVY------------IKK-----------RNRVHIEKEILKMLDH 110
           + F+  + LG G   +V             IK               V  E++++  LDH
Sbjct: 8   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67

Query: 111 PFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
           PF   L+  F+        + Y   G+LL   ++    
Sbjct: 68  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF 105

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 48.1 bits (114), Expect = 7e-08
 Identities = 22/98 (22%), Positives = 32/98 (32%), Gaps = 23/98 (23%)

Query: 74  DQFQLFRRLGSGIIRSVY------------IKK-----------RNRVHIEKEILKMLDH 110
             F   R +G G   +VY            IKK              +  E   L+ L H
Sbjct: 15  KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 74

Query: 111 PFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
           P        +   H + LV+EYC G     +   ++ L
Sbjct: 75  PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPL 112

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (114), Expect = 7e-08
 Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 19/93 (20%)

Query: 74  DQFQLFRRLGSGIIRSVY-----------------IKKRNRVHIEKE--ILKMLDHPFLP 114
           +++ +   LG G    V+                 +K  ++V ++KE  IL +  H  + 
Sbjct: 5   EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64

Query: 115 SLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRR 147
            L   FE+     ++ E+  G D+         
Sbjct: 65  HLHESFESMEELVMIFEFISGLDIFERINTSAF 97

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (112), Expect = 1e-07
 Identities = 18/104 (17%), Positives = 38/104 (36%), Gaps = 24/104 (23%)

Query: 74  DQFQLFRRLGSGIIRSVY------------IKK----------RNRVHIEKEILKMLDHP 111
           + +++   +G+G                   K+          +  +  E  +L+ L HP
Sbjct: 4   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 63

Query: 112 FLPSLFAEF--EASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP 153
            +   +       +    +V+EYC GGDL +V  +  + R  + 
Sbjct: 64  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD 107

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 45.9 bits (108), Expect = 3e-07
 Identities = 19/102 (18%), Positives = 36/102 (35%), Gaps = 27/102 (26%)

Query: 74  DQFQLFRRLGSGIIRSVY------------IKK-----------RNRVHIEKEILKMLDH 110
           D+++L   LG G +  V+            +K              R   E +    L+H
Sbjct: 7   DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 66

Query: 111 PFLPSLFAEFE----ASHYSRLVIEYCPGGDLLTVSQRQRRL 148
           P + +++   E    A     +V+EY  G  L  +   +  +
Sbjct: 67  PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM 108

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (108), Expect = 4e-07
 Identities = 22/101 (21%), Positives = 32/101 (31%), Gaps = 26/101 (25%)

Query: 74  DQFQLFRRLGSGIIRSVY------------IKK--------------RNRVHIEKEILKM 107
           D +     LGSG    V              K               R  +  E  ILK 
Sbjct: 10  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69

Query: 108 LDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
           + HP + +L   +E      L++E   GG+L      +  L
Sbjct: 70  IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESL 110

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (108), Expect = 4e-07
 Identities = 19/97 (19%), Positives = 33/97 (34%), Gaps = 21/97 (21%)

Query: 73  LDQFQLFRRLGSGIIRSVY------------IKK---------RNRVHIEKEILKMLDHP 111
           ++ + L + LG G    V             +K             +  E  I KML+H 
Sbjct: 4   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63

Query: 112 FLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
            +   +      +   L +EYC GG+L    +    +
Sbjct: 64  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 100

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.5 bits (107), Expect = 6e-07
 Identities = 18/101 (17%), Positives = 31/101 (30%), Gaps = 19/101 (18%)

Query: 70  QVGLDQFQLFRRLGSGIIRSVY------------IKK-------RNRVHIEKEILKMLDH 110
           ++      +  +LG G    VY            +K              E  ++K + H
Sbjct: 13  EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 72

Query: 111 PFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFS 151
           P L  L           ++ E+   G+LL   +   R   S
Sbjct: 73  PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVS 113

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 7e-07
 Identities = 15/93 (16%), Positives = 28/93 (30%), Gaps = 20/93 (21%)

Query: 74  DQFQLFRRLGSGIIRSVY---------IKK----------RNRVHIEKEILKMLDHPFLP 114
            Q  + +R+GSG   +VY         +K                 E  +L+   H  + 
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67

Query: 115 SLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRR 147
                +  +    +V ++C G  L         
Sbjct: 68  LFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIET 99

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 8e-07
 Identities = 13/93 (13%), Positives = 29/93 (31%), Gaps = 20/93 (21%)

Query: 74  DQFQLFRRLGSG--------------------IIRSVYIKKRNRVHIEKEILKMLDHPFL 113
            ++  F ++G G                     +      K+  +  E  +++   +P +
Sbjct: 20  KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79

Query: 114 PSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQR 146
            +    +       +V+EY  GG L  V     
Sbjct: 80  VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC 112

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 9e-07
 Identities = 19/104 (18%), Positives = 39/104 (37%), Gaps = 21/104 (20%)

Query: 73  LDQFQLFRR-LGSGIIRSVY---------------IKKRNRVHIEKEIL-KMLDHPFLPS 115
           +D +++  + LG GI   V                ++   +   E E+  +    P +  
Sbjct: 10  IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 69

Query: 116 LFAEFEASHYSR----LVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
           +   +E  +  R    +V+E   GG+L +  Q +    F+   A
Sbjct: 70  IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 113

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (103), Expect = 1e-06
 Identities = 17/92 (18%), Positives = 27/92 (29%), Gaps = 18/92 (19%)

Query: 74  DQFQLFRRLGSGIIRSVY-----------IKK-------RNRVHIEKEILKMLDHPFLPS 115
                 + LG+G    V            IK         +    E +++  L H  L  
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 63

Query: 116 LFAEFEASHYSRLVIEYCPGGDLLTVSQRQRR 147
           L+          ++ EY   G LL   +  R 
Sbjct: 64  LYGVCTKQRPIFIITEYMANGCLLNYLREMRH 95

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (103), Expect = 2e-06
 Identities = 25/100 (25%), Positives = 38/100 (38%), Gaps = 24/100 (24%)

Query: 73  LDQFQLFRRLGSGIIRSVY------------IKK-----------RNRVHIEKEILKM-L 108
           ++ F L + LG G    V+            IK                 +EK +L +  
Sbjct: 1   IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 60

Query: 109 DHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
           +HPFL  +F  F+       V+EY  GGDL+   Q   + 
Sbjct: 61  EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF 100

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (103), Expect = 2e-06
 Identities = 21/93 (22%), Positives = 30/93 (32%), Gaps = 18/93 (19%)

Query: 74  DQFQLFRRLGSGIIRSVY-----------IKK-------RNRVHIEKEILKMLDHPFLPS 115
            +    + +GSG    V+           IK              E E++  L HP L  
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 64

Query: 116 LFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
           L+          LV E+   G L    + QR L
Sbjct: 65  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL 97

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (103), Expect = 2e-06
 Identities = 19/103 (18%), Positives = 31/103 (30%), Gaps = 27/103 (26%)

Query: 71  VGLDQFQLFRRLGSGIIRSVY---------------IKK-----------RNRVHIEKEI 104
           +G    +L  +LG G    V                +K             +    E   
Sbjct: 5   IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64

Query: 105 LKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRR 147
           +  LDH  L  L+         ++V E  P G LL   ++ + 
Sbjct: 65  MHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQG 106

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (103), Expect = 2e-06
 Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 19/100 (19%)

Query: 74  DQFQLFRRLGSGIIRSVY-----------IKK-------RNRVHIEKEILKMLDHPFLPS 115
           +  +L  RLG+G    V+           +K         +    E  ++K L H  L  
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 72

Query: 116 LFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
           L+A         ++ EY   G L+   +    ++ +I   
Sbjct: 73  LYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKL 111

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (102), Expect = 3e-06
 Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 23/99 (23%)

Query: 73  LDQFQLFRRLGSGIIRSVY------------IKK-----------RNRVHIEKEILKMLD 109
           L+ F++ R LG G   +VY            +K             +++  E EI   L 
Sbjct: 5   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 64

Query: 110 HPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
           HP +  L+  F  +    L++EY P G +    Q+  + 
Sbjct: 65  HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF 103

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 4e-06
 Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 93  KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLR 149
             ++ +  E  +++ LD+P++  +    EA  +  LV+E    G L    Q+ R ++
Sbjct: 50  ALKDELLAEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVK 105

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.1 bits (98), Expect = 7e-06
 Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 19/94 (20%)

Query: 74  DQFQLFRRLGSGIIRSVY------------IK------KRNRVHIEKEILKMLDHP-FLP 114
           ++++L R++GSG    +Y            IK      K  ++HIE +I KM+     +P
Sbjct: 7   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIP 66

Query: 115 SLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
           ++        Y+ +V+E          +   R+ 
Sbjct: 67  TIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKF 100

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.0 bits (98), Expect = 8e-06
 Identities = 16/93 (17%), Positives = 29/93 (31%), Gaps = 24/93 (25%)

Query: 70  QVGLDQFQLFRRLGSGIIRSVY---------------IKK---------RNRVHIEKEIL 105
           ++ +   ++ + +G+G    V                IK          R     E  I+
Sbjct: 22  EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 81

Query: 106 KMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDL 138
              DHP +  L      S    ++ E+   G L
Sbjct: 82  GQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL 114

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (98), Expect = 8e-06
 Identities = 19/110 (17%), Positives = 33/110 (30%), Gaps = 26/110 (23%)

Query: 71  VGLDQFQLFRRLGSGIIRSVY-----------------IKK---------RNRVHIEKEI 104
           V  ++  + R LG G    VY                 IK          R     E  +
Sbjct: 17  VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 76

Query: 105 LKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPS 154
           +K  +   +  L         + +++E    GDL +  +  R    + P 
Sbjct: 77  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 126

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 42.0 bits (98), Expect = 8e-06
 Identities = 16/101 (15%), Positives = 29/101 (28%), Gaps = 26/101 (25%)

Query: 73  LDQFQLFRRLGSGIIRSVY------------IKK--------------RNRVHIEKEILK 106
           ++ F + R +G G    VY            +K                    I   ++ 
Sbjct: 3   MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 62

Query: 107 MLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRR 147
             D PF+  +   F        +++   GGDL     +   
Sbjct: 63  TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV 103

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (97), Expect = 9e-06
 Identities = 20/100 (20%), Positives = 36/100 (36%), Gaps = 27/100 (27%)

Query: 74  DQFQLFRRLGSGIIRSVY-----------------IKK---------RNRVHIEKEILKM 107
           ++    + LG+G    V                  +K          R  +  E ++L  
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 108 L-DHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQR 146
           L +H  + +L         + ++ EYC  GDLL   +R+R
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 122

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (97), Expect = 1e-05
 Identities = 24/103 (23%), Positives = 35/103 (33%), Gaps = 24/103 (23%)

Query: 70  QVGLDQFQLFRRLGSGIIRSVY--------------IKK---------RNRVHIEKEILK 106
            +  +  +    +G G    V               IK+               E E+L 
Sbjct: 6   VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 65

Query: 107 ML-DHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
            L  HP + +L    E   Y  L IEY P G+LL   ++ R L
Sbjct: 66  KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVL 108

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 41.6 bits (97), Expect = 1e-05
 Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 93  KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
           + R     E +IL+ +  HP +  L   +E + +  LV +    G+L      +  L
Sbjct: 51  ELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTL 107

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (95), Expect = 2e-05
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 93  KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSR----LVIEYCPGGDLLTVSQRQRRL 148
            +R R   E E+LK L HP +   +  +E++   +    LV E    G L T  +R + +
Sbjct: 50  SERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVM 109

Query: 149 R 149
           +
Sbjct: 110 K 110

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (95), Expect = 2e-05
 Identities = 21/101 (20%), Positives = 34/101 (33%), Gaps = 27/101 (26%)

Query: 74  DQFQLFRRLGSGIIRSVY-----------------IKK---------RNRVHIEKEILKM 107
           +  +  + LGSG    V                  +K          R  +  E +++  
Sbjct: 37  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96

Query: 108 L-DHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRR 147
           L  H  + +L      S    L+ EYC  GDLL   + +R 
Sbjct: 97  LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKRE 137

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (95), Expect = 2e-05
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 93  KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRR 147
                +  E +I+  LD+P++  L    +A     LV+E   GG L      +R 
Sbjct: 51  ADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALM-LVMEMAGGGPLHKFLVGKRE 104

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.5 bits (94), Expect = 3e-05
 Identities = 20/98 (20%), Positives = 45/98 (45%), Gaps = 23/98 (23%)

Query: 73  LDQFQLFRRLGSGIIRSVY-----------------------IKKRNRVHIEKEILKMLD 109
           L  FQ+ R LG+G    V+                       +K+    + E+ +L ++ 
Sbjct: 3   LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 62

Query: 110 HPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRR 147
           HPF+  ++  F+ +    ++++Y  GG+L ++ ++ +R
Sbjct: 63  HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR 100

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 3e-05
 Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 28/107 (26%)

Query: 70  QVGLDQFQLFRRLGSGIIRSVY---------------IKK------------RNRVHIEK 102
           +VG++ F+L + LG+G    V+               +K                   E+
Sbjct: 20  KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 79

Query: 103 EILKMLDH-PFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
           ++L+ +   PFL +L   F+      L+++Y  GG+L T   ++ R 
Sbjct: 80  QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERF 126

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 4e-05
 Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 25/96 (26%)

Query: 74  DQFQLFRRLGSGIIRSVY---------------IKK---------RNRVHIEKEILKMLD 109
           ++ +L R +G G    V+               IK          R +   E   ++  D
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66

Query: 110 HPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQ 145
           HP +  L      +    +++E C  G+L +  Q +
Sbjct: 67  HPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR 101

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 5e-05
 Identities = 23/101 (22%), Positives = 34/101 (33%), Gaps = 23/101 (22%)

Query: 71  VGLDQFQLFRRLGSGIIRSVY------------IKK-----------RNRVHIEKEILKM 107
           V ++ F   + LG G    V             +K                  E  +L+ 
Sbjct: 2   VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61

Query: 108 LDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
             HPFL +L   F+       V+EY  GG+L     R+R  
Sbjct: 62  TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVF 102

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.4 bits (91), Expect = 6e-05
 Identities = 15/100 (15%), Positives = 27/100 (27%), Gaps = 26/100 (26%)

Query: 74  DQFQLFRRLGSGIIRSVY-----------------IKK---------RNRVHIEKEILKM 107
           +  +  R +G G    V+                 +K          +     E  ++  
Sbjct: 13  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 72

Query: 108 LDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRR 147
            D+P +  L           L+ EY   GDL    +    
Sbjct: 73  FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSP 112

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.4 bits (91), Expect = 7e-05
 Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 23/119 (19%)

Query: 53  NQPAKRAMNKLLQQEHGQVGLDQFQLFRRLGSGIIRSVY--------------------- 91
            +  +  + K          LDQF   + LG+G    V                      
Sbjct: 20  AKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV 79

Query: 92  --IKKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
             +K+      EK IL+ ++ PFL  L   F+ +    +V+EY  GG++ +  +R  R 
Sbjct: 80  VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (90), Expect = 1e-04
 Identities = 22/110 (20%), Positives = 38/110 (34%), Gaps = 19/110 (17%)

Query: 64  LQQEHGQVGLDQFQLFRRLGSGIIRSVY-----------IKK-------RNRVHIEKEIL 105
           L ++  ++  +  +L  +LG G    V+           IK              E +++
Sbjct: 7   LAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVM 66

Query: 106 KMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA 155
           K L H  L  L+A         +V EY   G LL   + +      +P  
Sbjct: 67  KKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQL 115

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 38.7 bits (89), Expect = 1e-04
 Identities = 17/97 (17%), Positives = 30/97 (30%), Gaps = 21/97 (21%)

Query: 73  LDQFQLFRRLGSGIIRSVY-----------IKK----------RNRVHIEKEILKMLDHP 111
           ++++    ++G G    VY           +KK           +    E  ILK L H 
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60

Query: 112 FLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
            +  L+          LV E+        +   +  L
Sbjct: 61  NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGL 97

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 37.9 bits (87), Expect = 2e-04
 Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 20/91 (21%)

Query: 74  DQFQLFRRLGSGIIRSVY------------IK-----KRNRVHIEKEILKML-DHPFLPS 115
           D +QL R+LG G    V+            +K     K+ ++  E +IL+ L   P + +
Sbjct: 35  DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIIT 94

Query: 116 LFAEFE--ASHYSRLVIEYCPGGDLLTVSQR 144
           L    +   S    LV E+    D   + Q 
Sbjct: 95  LADIVKDPVSRTPALVFEHVNNTDFKQLYQT 125

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 2e-04
 Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 1/57 (1%)

Query: 92  IKKRNRVHIEKEILKMLDHPFLPSLF-AEFEASHYSRLVIEYCPGGDLLTVSQRQRR 147
           I + ++   E  I+K   HP + SL      +     +V+ Y   GDL    + +  
Sbjct: 69  IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 125

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (84), Expect = 5e-04
 Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 29/103 (28%)

Query: 74  DQFQLFRRLGSGIIRSVY-------------------IKK---------RNRVHIEKEIL 105
           D+  L + LG G    V                    +K           + +  E E++
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72

Query: 106 KML-DHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRR 147
           KM+  H  + +L           +++EY   G+L    Q +R 
Sbjct: 73  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRP 115

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (84), Expect = 6e-04
 Identities = 10/54 (18%), Positives = 18/54 (33%)

Query: 95  RNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRRL 148
                 E ++L+ L HP +  L   F       LV ++      + +      L
Sbjct: 44  NRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVL 97

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (83), Expect = 7e-04
 Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 26/99 (26%)

Query: 74  DQFQLFRRLGSGIIRSVY----------------IKK---------RNRVHIEKEILKML 108
            +F+  + LGSG   +VY                IK+            +  E  ++  +
Sbjct: 9   TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68

Query: 109 DHPFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRR 147
           D+P +  L      S   +L+ +  P G LL   +  + 
Sbjct: 69  DNPHVCRLLGICLTSTV-QLITQLMPFGCLLDYVREHKD 106

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (82), Expect = 0.001
 Identities = 17/95 (17%), Positives = 25/95 (26%), Gaps = 21/95 (22%)

Query: 74  DQFQLFRRLGSGIIRSVY----------IKK-----RNRVHIEKEILKM--LDHPFLPSL 116
               L   +G G    V+          +K            E EI +   L H  +   
Sbjct: 3   RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 62

Query: 117 FAEFEASHYSR----LVIEYCPGGDLLTVSQRQRR 147
            A     + +     LV +Y   G L     R   
Sbjct: 63  IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV 97

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.2 bits (80), Expect = 0.002
 Identities = 18/97 (18%), Positives = 30/97 (30%), Gaps = 22/97 (22%)

Query: 73  LDQFQLFRRLGSGIIRSVY------------IKK----------RNRVHIEKEILKMLDH 110
           ++ FQ   ++G G    VY            +KK           +    E  +LK L+H
Sbjct: 1   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60

Query: 111 PFLPSLFAEFEASHYSRLVIEYCPGGDLLTVSQRQRR 147
           P +  L       +   LV E+        +      
Sbjct: 61  PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT 97

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.9 bits (79), Expect = 0.002
 Identities = 16/109 (14%), Positives = 33/109 (30%), Gaps = 30/109 (27%)

Query: 73  LDQFQLFRRLGSGIIRSVY------------IKK----------RNRVHIEKEILKMLDH 110
           + +++   ++G G    V+            +KK                E +IL++L H
Sbjct: 9   VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 68

Query: 111 PFLPSLFAEFEASHYSR--------LVIEYCPGGDLLTVSQRQRRLRFS 151
             + +L                   LV ++C       +S    +   S
Sbjct: 69  ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS 117

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (78), Expect = 0.003
 Identities = 16/98 (16%), Positives = 29/98 (29%), Gaps = 25/98 (25%)

Query: 74  DQFQLFRRLGSGIIRSVY------------IKK---------RNRVHIEKEILKMLDHPF 112
            ++     +G G    V             IKK           R   E +IL    H  
Sbjct: 8   PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 67

Query: 113 LPSLFAEFEASHYSRL----VIEYCPGGDLLTVSQRQR 146
           +  +     A    ++    ++ +  G DL  + + Q 
Sbjct: 68  IIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH 105

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	156
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.77
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.76
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.76
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.75
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.75
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.75
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.74
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.73
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.73
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.73
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.72
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.72
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.71
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.71
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.71
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.69
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.69
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.68
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.68
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.68
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.68
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.67
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.66
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.66
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.65
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.65
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.65
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.64
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.64
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.64
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.63
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.63
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.62
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.61
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.61
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.61
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.6
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.56
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.56
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.55
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.55
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.55
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.54
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.54
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.53
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.53
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.52
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.5
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.45
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.43
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.42
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.42
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.41
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.39
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.38
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.37
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.35
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.34
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.32
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.28
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.18
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.37
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.06
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	93.44
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	86.36

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=3.4e-19  Score=129.56  Aligned_cols=84  Identities=29%  Similarity=0.472  Sum_probs=74.4

Q ss_pred             CccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      ++.+++|++.+.||+|+||.||+                       ...+.+.+|+.+++.++|||||++++++.+++.+
T Consensus         2 ~~~l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~   81 (263)
T d2j4za1           2 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRV   81 (263)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             CcchhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEE
Confidence            45678999999999999999999                       1234578999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |+|||||++|+|.++|++.  +.++|..+
T Consensus        82 ~ivmEy~~~g~L~~~l~~~--~~l~e~~~  108 (263)
T d2j4za1          82 YLILEYAPLGTVYRELQKL--SKFDEQRT  108 (263)
T ss_dssp             EEEEECCTTCBHHHHHHHH--SSCCHHHH
T ss_pred             EEEEeecCCCcHHHHHhhc--CCCCHHHH
Confidence            9999999999999999886  67887654

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=5e-19  Score=132.83  Aligned_cols=84  Identities=27%  Similarity=0.480  Sum_probs=75.9

Q ss_pred             CccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      ++.+++|++++.||+|+||.||+                       ...+.+.+|+.+|+.++||||+++++++++++.+
T Consensus         1 ~i~l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~   80 (337)
T d1o6la_           1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRL   80 (337)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEE
T ss_pred             CCchHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccccc
Confidence            45688999999999999999999                       1235678999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |+|||||+||+|.+++++.  +.++|+.|
T Consensus        81 ~iv~ey~~gg~L~~~~~~~--~~~~e~~~  107 (337)
T d1o6la_          81 CFVMEYANGGELFFHLSRE--RVFTEERA  107 (337)
T ss_dssp             EEEEECCTTCBHHHHHHHH--SCCCHHHH
T ss_pred             ccceeccCCCchhhhhhcc--cCCcHHHH
Confidence            9999999999999999986  78888765

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=4e-19  Score=130.70  Aligned_cols=84  Identities=24%  Similarity=0.434  Sum_probs=74.3

Q ss_pred             CccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      +...++|++.+.||+|+||.||+                       ...+.+.+|+++|+.++||||+++++++.+++.+
T Consensus         4 ~~~p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~   83 (288)
T d1uu3a_           4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL   83 (288)
T ss_dssp             CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEE
T ss_pred             CCCCCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEE
Confidence            44557899999999999999999                       1234588999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |+|||||+||+|.+++...  +.++|..+
T Consensus        84 ~ivmEy~~gg~L~~~~~~~--~~l~e~~~  110 (288)
T d1uu3a_          84 YFGLSYAKNGELLKYIRKI--GSFDETCT  110 (288)
T ss_dssp             EEEECCCTTEEHHHHHHHH--SSCCHHHH
T ss_pred             EEEEEccCCCCHHHhhhcc--CCCCHHHH
Confidence            9999999999999999886  77887654

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=8.4e-19  Score=129.05  Aligned_cols=81  Identities=27%  Similarity=0.374  Sum_probs=72.2

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c--------------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K--------------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~--------------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      .+.|++.+.||+|+||.||+            |              ..+.+.+|+.+|+.++|||||++++++.+++.+
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   88 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   88 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            36699999999999999999            1              135688999999999999999999999999999


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |+|||||+||+|.++|++.  +.++|..+
T Consensus        89 ~iv~E~~~gg~L~~~i~~~--~~l~~~~~  115 (293)
T d1jksa_          89 ILILELVAGGELFDFLAEK--ESLTEEEA  115 (293)
T ss_dssp             EEEEECCCSCBHHHHHHHH--SSCCHHHH
T ss_pred             EEEEEcCCCccccchhccc--cccchhHH
Confidence            9999999999999999886  67877654

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.3e-18  Score=129.77  Aligned_cols=82  Identities=18%  Similarity=0.268  Sum_probs=72.3

Q ss_pred             CCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      .++|++.+.||+|+||.||+                   .....+.+|+++|..++|||||++++++++++.+|+|||||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~   83 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecC
Confidence            57899999999999999999                   12345789999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCCCCCc
Q 043174          134 PGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      +||+|.++|++. ...++|+++
T Consensus        84 ~gg~L~~~i~~~-~~~l~e~~~  104 (321)
T d1tkia_          84 SGLDIFERINTS-AFELNEREI  104 (321)
T ss_dssp             CCCBHHHHHTSS-SCCCCHHHH
T ss_pred             CCCcHHHHHHhc-CCCCCHHHH
Confidence            999999999875 346887654

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=2.7e-19  Score=130.62  Aligned_cols=81  Identities=25%  Similarity=0.480  Sum_probs=71.4

Q ss_pred             CCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           73 LDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      .++|++.+.||+|+||.||+                     ...+.+.+|+.+|+.++|||||++++++.+++.+|+|||
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE   83 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   83 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence            57899999999999999999                     123468899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      ||+||+|.++|+++  +.++|..+
T Consensus        84 y~~gg~L~~~l~~~--~~l~e~~~  105 (271)
T d1nvra_          84 YCSGGELFDRIEPD--IGMPEPDA  105 (271)
T ss_dssp             CCTTEEGGGGSBTT--TBCCHHHH
T ss_pred             ccCCCcHHHHHhcC--CCCCHHHH
Confidence            99999999999875  67887654

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.4e-18  Score=127.73  Aligned_cols=81  Identities=25%  Similarity=0.433  Sum_probs=72.3

Q ss_pred             CCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           74 DQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      +.|++++.||+|+||.||+                    +..+.+.+|+.+|+.++|||||++++++.+++.+|+|||||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            5699999999999999999                    34567899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCCCCCc
Q 043174          134 PGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      ++|+|.+++.+. .+.++|.++
T Consensus        92 ~~g~L~~~~~~~-~~~l~e~~~  112 (288)
T d2jfla1          92 AGGAVDAVMLEL-ERPLTESQI  112 (288)
T ss_dssp             TTEEHHHHHHHH-TSCCCHHHH
T ss_pred             CCCcHHHHHHhc-CCCCCHHHH
Confidence            999999998765 356887654

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=6.8e-19  Score=131.22  Aligned_cols=83  Identities=22%  Similarity=0.332  Sum_probs=73.5

Q ss_pred             ccCCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEE
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      +..++|++++.||+|+||.||+                     ...+.+.+|+.+|+.++|||||+++++|.+++.+|+|
T Consensus         3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iV   82 (322)
T d1s9ja_           3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC   82 (322)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            4567899999999999999999                     1234688999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |||++||+|.+++.+.  +.++|..+
T Consensus        83 mEy~~gg~L~~~l~~~--~~l~~~~~  106 (322)
T d1s9ja_          83 MEHMDGGSLDQVLKKA--GRIPEQIL  106 (322)
T ss_dssp             EECCTTEEHHHHHHHH--SSCCHHHH
T ss_pred             EEcCCCCcHHHHHhhc--CCCCHHHH
Confidence            9999999999999876  67877543

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.73  E-value=1.2e-18  Score=129.15  Aligned_cols=81  Identities=21%  Similarity=0.334  Sum_probs=69.5

Q ss_pred             CCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           73 LDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      .+.|++.+.||+|+||.||+                     .....+.+|+.+|..++|||||++++++.+++.+|+|||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            46699999999999999999                     122356789999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      ||+||+|.++|.+.  +.++|.++
T Consensus        88 ~~~gg~L~~~l~~~--~~l~e~~~  109 (307)
T d1a06a_          88 LVSGGELFDRIVEK--GFYTERDA  109 (307)
T ss_dssp             CCCSCBHHHHHHTC--SCCCHHHH
T ss_pred             ccCCCcHHHhhhcc--cCCCHHHH
Confidence            99999999999875  77887654

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.73  E-value=2.7e-18  Score=129.38  Aligned_cols=82  Identities=26%  Similarity=0.459  Sum_probs=72.0

Q ss_pred             CCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           73 LDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      +++|++.+.||+|+||.||+                    ...+.+.+|+.+|..++|||||++++++.+++.+|+||||
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  104 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  104 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            57899999999999999999                    2235678999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCCCc
Q 043174          133 CPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |+||+|.++|.+. .+.++|+.+
T Consensus       105 ~~gg~L~~~l~~~-~~~l~e~~~  126 (350)
T d1koaa2         105 MSGGELFEKVADE-HNKMSEDEA  126 (350)
T ss_dssp             CCSCBHHHHHTCT-TSCBCHHHH
T ss_pred             CCCCCHHHHHHhh-cCCCCHHHH
Confidence            9999999999654 356777654

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.72  E-value=1.8e-18  Score=127.77  Aligned_cols=86  Identities=19%  Similarity=0.270  Sum_probs=74.3

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA  122 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~  122 (156)
                      ....+..++|++.+.||+|+||.||+                        +..+.+.+|+.+|+.++|||||++++++.+
T Consensus        19 f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~   98 (299)
T d1jpaa_          19 FAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTK   98 (299)
T ss_dssp             HSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             hchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEee
Confidence            34466778999999999999999998                        233568999999999999999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          123 SHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       123 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++.+++|||||++|+|.+++... .+.+++.
T Consensus        99 ~~~~~iv~Ey~~~g~L~~~~~~~-~~~l~~~  128 (299)
T d1jpaa_          99 STPVMIITEFMENGSLDSFLRQN-DGQFTVI  128 (299)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHTT-TTCSCHH
T ss_pred             CCEEEEEEEecCCCcceeeeccc-cCCCCHH
Confidence            99999999999999999998875 3456654

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.72  E-value=5.1e-18  Score=124.07  Aligned_cols=81  Identities=22%  Similarity=0.344  Sum_probs=72.3

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c-----------------hhhhHHHHHHHHHhCC-CCCCCceeEEEEe
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K-----------------KRNRVHIEKEILKMLD-HPFLPSLFAEFEA  122 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~-----------------~~~~~~~E~~~l~~~~-h~~iv~l~~~~~~  122 (156)
                      .++|++.+.||+|+||.||+            |                 ..+.+.+|+.+++.+. ||||+++++++.+
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~   81 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   81 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence            47899999999999999999            1                 1235789999999996 9999999999999


Q ss_pred             CCeEEEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          123 SHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       123 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      ++.+|+||||+++|+|.++|+.+  +.++|+++
T Consensus        82 ~~~~~ivmE~~~~g~L~~~l~~~--~~l~e~~~  112 (277)
T d1phka_          82 NTFFFLVFDLMKKGELFDYLTEK--VTLSEKET  112 (277)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHH--SSCCHHHH
T ss_pred             CcceEEEEEcCCCchHHHHHHhc--CCCCHHHH
Confidence            99999999999999999999886  78888765

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=5.2e-18  Score=124.96  Aligned_cols=80  Identities=19%  Similarity=0.333  Sum_probs=70.9

Q ss_pred             CCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           73 LDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      .++|++++.||+|+||.||+                    ...+.+.+|+.+|+.++|||||++++++.+++.+|+||||
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy   98 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEe
Confidence            45799999999999999999                    2235689999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCCCc
Q 043174          133 CPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |+||+|.+++.+   +.++|..+
T Consensus        99 ~~gg~L~~~~~~---~~l~~~~~  118 (293)
T d1yhwa1          99 LAGGSLTDVVTE---TCMDEGQI  118 (293)
T ss_dssp             CTTCBHHHHHHH---SCCCHHHH
T ss_pred             cCCCcHHHHhhc---cCCCHHHH
Confidence            999999999876   46777654

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.71  E-value=4.5e-18  Score=128.24  Aligned_cols=82  Identities=27%  Similarity=0.421  Sum_probs=71.6

Q ss_pred             CCCeEEEEEeccCCceEEEe--------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           73 LDQFQLFRRLGSGIIRSVYI--------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~--------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      .++|++++.||+|+||.||+                    ...+.+.+|+.+|+.++|||||+++++|.+++.+|+||||
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  107 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  107 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            47799999999999999999                    1234578899999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCCCc
Q 043174          133 CPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |+||+|++++.+. ...|+|.++
T Consensus       108 ~~gg~L~~~~~~~-~~~l~e~~~  129 (352)
T d1koba_         108 LSGGELFDRIAAE-DYKMSEAEV  129 (352)
T ss_dssp             CCCCBHHHHTTCT-TCCBCHHHH
T ss_pred             CCCChHHHHHHhc-CCCCCHHHH
Confidence            9999999988764 346887654

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.71  E-value=5.7e-18  Score=124.37  Aligned_cols=85  Identities=20%  Similarity=0.259  Sum_probs=74.4

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLV  129 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv  129 (156)
                      +.+..++|++.+.||+|+||.||+                   ...+.+.+|+.+|+.++|||||++++++.+++.++++
T Consensus        12 wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv   91 (287)
T d1opja_          12 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII   91 (287)
T ss_dssp             TBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             cEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEE
Confidence            456678899999999999999999                   2345689999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCC
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||||++|+|.+++.+.....+++.
T Consensus        92 ~E~~~~g~l~~~l~~~~~~~~~~~  115 (287)
T d1opja_          92 TEFMTYGNLLDYLRECNRQEVSAV  115 (287)
T ss_dssp             EECCTTCBHHHHHHHSCTTTSCHH
T ss_pred             eecccCcchHHHhhhccccchHHH
Confidence            999999999999987544556654

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=2.1e-17  Score=123.09  Aligned_cols=81  Identities=32%  Similarity=0.612  Sum_probs=69.7

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c-----------hhhhHHHHHHHHH-hCCCCCCCceeEEEEeCCeEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K-----------KRNRVHIEKEILK-MLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~-----------~~~~~~~E~~~l~-~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      +++|++++.||+|+||.||+            |           ..+.+..|+.++. .++|||||++++++.+++.+|+
T Consensus         1 iddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yi   80 (320)
T d1xjda_           1 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF   80 (320)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             CCCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeE
Confidence            47899999999999999999            1           1234677777765 6899999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      ||||+++|+|.++|+..  +.++|+++
T Consensus        81 vmEy~~~g~L~~~i~~~--~~~~e~~~  105 (320)
T d1xjda_          81 VMEYLNGGDLMYHIQSC--HKFDLSRA  105 (320)
T ss_dssp             EEECCTTCBHHHHHHHH--SSCCHHHH
T ss_pred             EEeecCCCcHHHHhhcc--CCCCHHHH
Confidence            99999999999999886  77887654

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.69  E-value=1.4e-17  Score=123.74  Aligned_cols=81  Identities=27%  Similarity=0.628  Sum_probs=71.8

Q ss_pred             cCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      .+++|++++.||+|+||.||+                       +..+.+.+|+.+|+.++|||||++++++.+++.+|+
T Consensus         2 sl~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i   81 (316)
T d1fota_           2 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM   81 (316)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred             chhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeee
Confidence            467899999999999999999                       223467899999999999999999999999999999


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      |||||+||+|..++...  +.++++.
T Consensus        82 vmE~~~gg~l~~~~~~~--~~~~~~~  105 (316)
T d1fota_          82 IMDYIEGGELFSLLRKS--QRFPNPV  105 (316)
T ss_dssp             EECCCCSCBHHHHHHHT--SSCCHHH
T ss_pred             EeeecCCcccccccccc--ccccccH
Confidence            99999999999999885  6666544

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=2.5e-17  Score=119.94  Aligned_cols=78  Identities=28%  Similarity=0.419  Sum_probs=66.6

Q ss_pred             eEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe----CCeEEEE
Q 043174           76 FQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA----SHYSRLV  129 (156)
Q Consensus        76 ~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~----~~~~~lv  129 (156)
                      |++.+.||+|+||.||+                      ...+.+.+|+++|+.++|||||++++++.+    ...+|+|
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv   90 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV   90 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence            57788999999999999                      123468899999999999999999999876    4568999


Q ss_pred             EeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          130 IEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       130 ~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |||+++|+|.+++++.  +.++++.+
T Consensus        91 mE~~~~g~L~~~l~~~--~~~~~~~~  114 (270)
T d1t4ha_          91 TELMTSGTLKTYLKRF--KVMKIKVL  114 (270)
T ss_dssp             EECCCSCBHHHHHHHH--SSCCHHHH
T ss_pred             EeCCCCCcHHHHHhcc--ccccHHHH
Confidence            9999999999999886  66776543

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=9.8e-18  Score=122.06  Aligned_cols=82  Identities=21%  Similarity=0.409  Sum_probs=67.6

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe--CCeEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA--SHYSRL  128 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~--~~~~~l  128 (156)
                      .++|++.+.||+|+||.||+                      ...+.+.+|+.+|+.++|||||++++++.+  .+.+|+
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i   82 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   82 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence            36899999999999999999                      123468899999999999999999999865  567999


Q ss_pred             EEeccCCCCHHHHHHhc--CCCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQ--RRLRFSIPS  154 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~--~~~~~~e~~  154 (156)
                      |||||++|+|.+++.+.  ..+.++|..
T Consensus        83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~  110 (269)
T d2java1          83 VMEYCEGGDLASVITKGTKERQYLDEEF  110 (269)
T ss_dssp             EEECCTTEEHHHHHHHHHHHTCCCCHHH
T ss_pred             EEecCCCCcHHHHHHhccccCCCCCHHH
Confidence            99999999999999652  135677654

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=3.4e-17  Score=122.01  Aligned_cols=77  Identities=25%  Similarity=0.349  Sum_probs=68.2

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFE  121 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~  121 (156)
                      +.+..++|++.++||+|+||.||+                          .....+.+|+.+|..+ +|||||++++++.
T Consensus        32 wei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~  111 (325)
T d1rjba_          32 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT  111 (325)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEe
Confidence            345668899999999999999998                          1234578999999988 8999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhc
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +.+.+|+|||||++|+|.++|+.+
T Consensus       112 ~~~~~~lv~Ey~~~g~L~~~l~~~  135 (325)
T d1rjba_         112 LSGPIYLIFEYCCYGDLLNYLRSK  135 (325)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTT
T ss_pred             eCCeEEEEEEcCCCCcHHHHHHhc
Confidence            999999999999999999999875

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=3.5e-17  Score=118.62  Aligned_cols=81  Identities=23%  Similarity=0.281  Sum_probs=70.3

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      ..++|++.+.||+|+||.||+                  ...+.+.+|+.++..++|||||++++++.+++.+++||||+
T Consensus         3 dp~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~   82 (263)
T d1sm2a_           3 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   82 (263)
T ss_dssp             CCSCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             ChHHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEec
Confidence            457899999999999999999                  22356899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCCCC
Q 043174          134 PGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++|+|.+++... ...++++
T Consensus        83 ~~g~L~~~l~~~-~~~~~~~  101 (263)
T d1sm2a_          83 EHGCLSDYLRTQ-RGLFAAE  101 (263)
T ss_dssp             TTCBHHHHHHTT-TTCCCHH
T ss_pred             CCCcHHHHhhcc-ccCCCHH
Confidence            999999999765 2445543

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.67  E-value=2.4e-17  Score=122.17  Aligned_cols=79  Identities=24%  Similarity=0.348  Sum_probs=69.4

Q ss_pred             CeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           75 QFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        75 ~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      .|+.++.||+|+||.||+                       ...+.+.+|+.+|+.++|||||++++++.+++.+|+|||
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence            399999999999999999                       123468899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      ||++|+|..++...  +.++|.++
T Consensus        96 ~~~~g~l~~~~~~~--~~l~e~~~  117 (309)
T d1u5ra_          96 YCLGSASDLLEVHK--KPLQEVEI  117 (309)
T ss_dssp             CCSEEHHHHHHHHT--SCCCHHHH
T ss_pred             ecCCCchHHHHHhC--CCCCHHHH
Confidence            99999998877765  67887654

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.66  E-value=7.2e-17  Score=122.05  Aligned_cols=83  Identities=22%  Similarity=0.319  Sum_probs=68.3

Q ss_pred             ccCCCeEEEEEeccCCceEEEe------------ch-----------hhhHHHH---HHHHHhCCCCCCCceeEEEEeCC
Q 043174           71 VGLDQFQLFRRLGSGIIRSVYI------------KK-----------RNRVHIE---KEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        71 ~~~~~~~~~~~lG~G~~g~V~~------------~~-----------~~~~~~E---~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      +.+++|++.+.||+|+||.||+            |.           ...+.+|   +.++..++|||||++++++.+++
T Consensus         1 lslddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~   80 (364)
T d1omwa3           1 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD   80 (364)
T ss_dssp             CCSTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred             CCHHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECC
Confidence            3578999999999999999999            11           1223444   55666778999999999999999


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      .+|+|||||+||+|.++|.+.  +.++|..+
T Consensus        81 ~~~ivmE~~~gg~L~~~l~~~--~~~~e~~~  109 (364)
T d1omwa3          81 KLSFILDLMNGGDLHYHLSQH--GVFSEADM  109 (364)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH--CSCCHHHH
T ss_pred             EEEEEEEecCCCcHHHHHHhc--ccccHHHH
Confidence            999999999999999999886  67776543

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.66  E-value=1.3e-16  Score=120.05  Aligned_cols=87  Identities=33%  Similarity=0.540  Sum_probs=76.0

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS  123 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~  123 (156)
                      ......+++|++++.||+|+||.||+                       +..+.+.+|+.+|+.++|||||++++++.+.
T Consensus        34 ~~~~~~ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~  113 (350)
T d1rdqe_          34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN  113 (350)
T ss_dssp             CCCCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             ccCCCCccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccc
Confidence            33445578999999999999999999                       1234578999999999999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      ..+++||||+.+|+|..++.+.  +.++|..+
T Consensus       114 ~~~~~v~e~~~~g~l~~~l~~~--~~l~e~~~  143 (350)
T d1rdqe_         114 SNLYMVMEYVAGGEMFSHLRRI--GRFSEPHA  143 (350)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHH--CCCCHHHH
T ss_pred             cccccccccccccchhhhHhhc--CCCCHHHH
Confidence            9999999999999999999886  77887654

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.4e-16  Score=117.81  Aligned_cols=76  Identities=26%  Similarity=0.413  Sum_probs=67.6

Q ss_pred             CccCCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEeCCe
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEASHY  125 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~~~~  125 (156)
                      .+..++|++.++||+|+||.||+                       +..+.+.+|+.+|..+ +|||||++++++.+.+.
T Consensus         6 ~i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~   85 (309)
T d1fvra_           6 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY   85 (309)
T ss_dssp             BCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTE
T ss_pred             ccCHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCe
Confidence            45668999999999999999998                       2345689999999998 79999999999999999


Q ss_pred             EEEEEeccCCCCHHHHHHhc
Q 043174          126 SRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +++||||+++|+|.++|++.
T Consensus        86 ~~iV~ey~~~g~L~~~l~~~  105 (309)
T d1fvra_          86 LYLAIEYAPHGNLLDFLRKS  105 (309)
T ss_dssp             EEEEECCCTTCBHHHHHHTT
T ss_pred             eEEEEEecCCCcHHHHHhhc
Confidence            99999999999999999763

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=2.9e-17  Score=119.91  Aligned_cols=84  Identities=18%  Similarity=0.259  Sum_probs=71.2

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe-------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI-------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~-------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      ++.+..++|++.+.||+|+||.||+                   +..+.+.+|+.+|..++|||||++++++. .+.+++
T Consensus         2 dwei~~~~~~~~~~lG~G~fg~Vy~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~l   80 (276)
T d1uwha_           2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAI   80 (276)
T ss_dssp             CCBCCTTCCCCCSEEEECSSCEEEEEESSSEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             CcccccccEEEEEEEeeCCCcEEEEEEECCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEE
Confidence            3567788999999999999999999                   23467889999999999999999999764 567899


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |||||++|+|.++|... .+.+++.
T Consensus        81 v~Ey~~~g~L~~~l~~~-~~~~~~~  104 (276)
T d1uwha_          81 VTQWCEGSSLYHHLHII-ETKFEMI  104 (276)
T ss_dssp             EEECCCEEEHHHHHHTS-CCCCCHH
T ss_pred             EEecCCCCCHHHHHhhc-cCCCCHH
Confidence            99999999999999765 3456654

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.3e-16  Score=116.93  Aligned_cols=81  Identities=25%  Similarity=0.350  Sum_probs=67.1

Q ss_pred             ccCCCeEEEEE-eccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           71 VGLDQFQLFRR-LGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        71 ~~~~~~~~~~~-lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      +..++|.+.+. ||+|+||.||+                       ...+.+.+|+.+|..++|||||++++++.+ +.+
T Consensus         5 l~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~   83 (285)
T d1u59a_           5 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EAL   83 (285)
T ss_dssp             CCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSE
T ss_pred             ecccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeE
Confidence            34567888885 99999999998                       123568899999999999999999999875 468


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      |+|||||++|+|.+++... .+.+++.
T Consensus        84 ~lvmE~~~~g~L~~~l~~~-~~~l~~~  109 (285)
T d1u59a_          84 MLVMEMAGGGPLHKFLVGK-REEIPVS  109 (285)
T ss_dssp             EEEEECCTTEEHHHHHTTC-TTTSCHH
T ss_pred             EEEEEeCCCCcHHHHhhcc-ccCCCHH
Confidence            9999999999999998764 3556654

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.64  E-value=1.2e-16  Score=116.49  Aligned_cols=81  Identities=23%  Similarity=0.291  Sum_probs=69.7

Q ss_pred             CCCeEEEEEeccCCceEEEe-----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC----e
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH----Y  125 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~----~  125 (156)
                      .++|++.+.||+|+||.||+                       ...+.+.+|+.+++.++|||||++++++.+.+    .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            46799999999999999999                       12345889999999999999999999988754    4


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      +|+||||++||+|.+++...  +.++++++
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~--~~l~~~~~  113 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTE--GPMTPKRA  113 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHH--CSCCHHHH
T ss_pred             EEEEEECCCCCEehhhhccc--CCCCHHHH
Confidence            89999999999999999886  77887654

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.2e-16  Score=116.31  Aligned_cols=84  Identities=20%  Similarity=0.362  Sum_probs=70.5

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH  124 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~  124 (156)
                      +.+..++|++.+.||+|+||.||+                        ...+.+.+|+.+|+.++|||||++++++. ++
T Consensus         2 ~ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~   80 (273)
T d1mp8a_           2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-EN   80 (273)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SS
T ss_pred             CCcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cC
Confidence            346678899999999999999998                        12346889999999999999999999885 56


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      .+|+||||+++|+|.+++... .+.+++..
T Consensus        81 ~~~iv~E~~~~g~l~~~~~~~-~~~l~~~~  109 (273)
T d1mp8a_          81 PVWIIMELCTLGELRSFLQVR-KYSLDLAS  109 (273)
T ss_dssp             SCEEEEECCTTEEHHHHHHHT-TTTSCHHH
T ss_pred             eEEEEEEeccCCcHHhhhhcc-CCCCCHHH
Confidence            789999999999999998765 35566543

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=7.3e-17  Score=120.76  Aligned_cols=84  Identities=21%  Similarity=0.293  Sum_probs=69.0

Q ss_pred             cCCCeEEEE-EeccCCceEEEe---------------chhhhHHHHHHHHHh-CCCCCCCceeEEEEe----CCeEEEEE
Q 043174           72 GLDQFQLFR-RLGSGIIRSVYI---------------KKRNRVHIEKEILKM-LDHPFLPSLFAEFEA----SHYSRLVI  130 (156)
Q Consensus        72 ~~~~~~~~~-~lG~G~~g~V~~---------------~~~~~~~~E~~~l~~-~~h~~iv~l~~~~~~----~~~~~lv~  130 (156)
                      ..++|.++. .||+|+||.||+               +....+.+|+.++.+ .+|||||+++++|++    ...+|+||
T Consensus         9 i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivm   88 (335)
T d2ozaa1           9 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVM   88 (335)
T ss_dssp             GGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             cccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCcHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEE
Confidence            367898875 699999999999               234568899998765 589999999999986    46799999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      |||+||+|+++|+++....|+|.++
T Consensus        89 Ey~~gg~L~~~i~~~~~~~l~e~~~  113 (335)
T d2ozaa1          89 ECLDGGELFSRIQDRGDQAFTEREA  113 (335)
T ss_dssp             ECCCSEEHHHHHHSCSCCCEEHHHH
T ss_pred             ECCCCCcHHHHHHhcCCCCcCHHHH
Confidence            9999999999998753456777654

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=6.2e-17  Score=117.82  Aligned_cols=86  Identities=22%  Similarity=0.399  Sum_probs=70.3

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      ..+.+..++|++.+.||+|+||.||+                  ...+.+.+|+.+|..++|||||++++++. ++.+++
T Consensus         6 ~~wei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~i   84 (272)
T d1qpca_           6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYI   84 (272)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred             CCeecCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEE
Confidence            44556778999999999999999999                  22356899999999999999999999775 466899


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||||+++|+|.+++.......+++.
T Consensus        85 v~Ey~~~g~L~~~~~~~~~~~l~~~  109 (272)
T d1qpca_          85 ITEYMENGSLVDFLKTPSGIKLTIN  109 (272)
T ss_dssp             EEECCTTCBHHHHTTSHHHHTCCHH
T ss_pred             EEEeCCCCcHHHHHhhcCCCCCCHH
Confidence            9999999999998765422345543

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.4e-16  Score=115.47  Aligned_cols=77  Identities=18%  Similarity=0.306  Sum_probs=66.0

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe----------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe-CCeEEEEEe
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI----------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA-SHYSRLVIE  131 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~----------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~-~~~~~lv~E  131 (156)
                      +.+..++|++.+.||+|+||.||+                ...+.+.+|+++++.++||||+++++++.+ .+.+|+|||
T Consensus         2 w~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~e   81 (262)
T d1byga_           2 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE   81 (262)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred             CccCHHHeEEeEEEecCCCeEEEEEEECCeEEEEEEECcHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEe
Confidence            457788999999999999999998                234678999999999999999999998854 567899999


Q ss_pred             ccCCCCHHHHHHhc
Q 043174          132 YCPGGDLLTVSQRQ  145 (156)
Q Consensus       132 ~~~~g~L~~~l~~~  145 (156)
                      |+++|+|.++|..+
T Consensus        82 y~~~g~L~~~l~~~   95 (262)
T d1byga_          82 YMAKGSLVDYLRSR   95 (262)
T ss_dssp             CCTTEEHHHHHHHH
T ss_pred             ccCCCCHHHHHHhc
Confidence            99999999999764

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=9.6e-17  Score=116.09  Aligned_cols=80  Identities=21%  Similarity=0.321  Sum_probs=69.3

Q ss_pred             cCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEecc
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      ..++|++.++||+|+||.||+                  ...+.+.+|+.++..++||||+++++++.+++.+++||||+
T Consensus         2 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~   81 (258)
T d1k2pa_           2 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM   81 (258)
T ss_dssp             CCCCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECC
T ss_pred             ChHHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEcc
Confidence            357899999999999999999                  23457899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCCC
Q 043174          134 PGGDLLTVSQRQRRLRFSI  152 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~~e  152 (156)
                      ++|+|..++... ...+++
T Consensus        82 ~~g~l~~~~~~~-~~~~~~   99 (258)
T d1k2pa_          82 ANGCLLNYLREM-RHRFQT   99 (258)
T ss_dssp             TTEEHHHHHHSG-GGCCCH
T ss_pred             CCCcHHHhhhcc-ccCCcH
Confidence            999999998764 234443

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=2.4e-16  Score=115.55  Aligned_cols=86  Identities=22%  Similarity=0.348  Sum_probs=71.7

Q ss_pred             ccCCccCCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEE
Q 043174           67 EHGQVGLDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRL  128 (156)
Q Consensus        67 ~~~~~~~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~l  128 (156)
                      ..+.+..++|++.+.||+|+||.||+                  ...+.+.+|+.+|..++|||||++++++. .+.+++
T Consensus        10 ~~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~l   88 (285)
T d1fmka3          10 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYI   88 (285)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred             cceEcCHHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEE
Confidence            44566778999999999999999999                  12356899999999999999999999885 456899


Q ss_pred             EEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          129 VIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       129 v~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ||||+++|+|..++.....+.+++.
T Consensus        89 v~Ey~~~g~l~~~~~~~~~~~l~~~  113 (285)
T d1fmka3          89 VTEYMSKGSLLDFLKGETGKYLRLP  113 (285)
T ss_dssp             EECCCTTCBHHHHHSHHHHTTCCHH
T ss_pred             EEEecCCCchhhhhhhcccccchHH
Confidence            9999999999999876433456654

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=4e-16  Score=114.74  Aligned_cols=82  Identities=23%  Similarity=0.340  Sum_probs=68.6

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      +++|++++.||+|+||.||+                      ...+.+.+|+.+|+.++|||||++++++.+++.+|+||
T Consensus         1 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~   80 (298)
T d1gz8a_           1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF   80 (298)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CCCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEE
Confidence            47899999999999999999                      12456889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      ||+.+ .+..++.....+.++|+.+
T Consensus        81 e~~~~-~~~~~~~~~~~~~l~e~~~  104 (298)
T d1gz8a_          81 EFLHQ-DLKKFMDASALTGIPLPLI  104 (298)
T ss_dssp             ECCSE-EHHHHHHHTTTTCCCHHHH
T ss_pred             eecCC-chhhhhhhhcccCCCHHHH
Confidence            99975 5666665543566777653

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=6.3e-16  Score=112.98  Aligned_cols=84  Identities=19%  Similarity=0.204  Sum_probs=71.5

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS  123 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~  123 (156)
                      ..+..++|++.++||+|+||.||+                         +....+.+|+.+|..++|||||++++++.+.
T Consensus         2 ~ei~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~   81 (283)
T d1mqba_           2 TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY   81 (283)
T ss_dssp             CBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             CcCCHHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecC
Confidence            345678899999999999999998                         1234588999999999999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +.++++|||+.+|+|.+++... .+.+++.
T Consensus        82 ~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~  110 (283)
T d1mqba_          82 KPMMIITEYMENGALDKFLREK-DGEFSVL  110 (283)
T ss_dssp             SSEEEEEECCTTEEHHHHHHHT-TTCSCHH
T ss_pred             CceEEEEEecccCcchhhhhcc-cccccHH
Confidence            9999999999999999988765 3445543

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=5e-16  Score=113.30  Aligned_cols=76  Identities=24%  Similarity=0.313  Sum_probs=63.2

Q ss_pred             eEEE-EEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           76 FQLF-RRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        76 ~~~~-~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      +.+. ++||+|+||.||+                        ...+.+.+|+.+|+.++|||||++++++.++ ..++||
T Consensus         8 ~~le~k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~-~~~lvm   86 (277)
T d1xbba_           8 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVM   86 (277)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-SEEEEE
T ss_pred             CeecCCCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC-CEEEEE
Confidence            4443 4799999999998                        1234688999999999999999999998754 578999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      |||++|+|.+++++.  +.+++..
T Consensus        87 E~~~~g~L~~~l~~~--~~l~~~~  108 (277)
T d1xbba_          87 EMAELGPLNKYLQQN--RHVKDKN  108 (277)
T ss_dssp             ECCTTEEHHHHHHHC--TTCCHHH
T ss_pred             EcCCCCcHHHHHhhc--cCCCHHH
Confidence            999999999999885  6677653

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=2.3e-15  Score=111.24  Aligned_cols=78  Identities=19%  Similarity=0.298  Sum_probs=68.9

Q ss_pred             cCCccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEE
Q 043174           68 HGQVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFE  121 (156)
Q Consensus        68 ~~~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~  121 (156)
                      .+.+..++|.+.+.||+|+||.||+                          +....+.+|+.+++.++|||||++++++.
T Consensus        14 ~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~   93 (308)
T d1p4oa_          14 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS   93 (308)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred             ceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEe
Confidence            4566778999999999999999996                          12235789999999999999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhc
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      .++.+++||||+++|+|.+++...
T Consensus        94 ~~~~~~lv~e~~~~g~l~~~~~~~  117 (308)
T d1p4oa_          94 QGQPTLVIMELMTRGDLKSYLRSL  117 (308)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHH
T ss_pred             cCCceeEEEeecCCCCHHHHHHhc
Confidence            999999999999999999998753

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=2.4e-15  Score=111.25  Aligned_cols=77  Identities=23%  Similarity=0.370  Sum_probs=68.5

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFE  121 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~  121 (156)
                      +.+..++|++.++||+|+||.||+                          .....+.+|+.++..+ +|||||++++++.
T Consensus        18 ~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~   97 (311)
T d1t46a_          18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT   97 (311)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEe
Confidence            456678999999999999999997                          1234588999999998 7999999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhc
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +...++++||||++|+|.++|++.
T Consensus        98 ~~~~~~lvmE~~~~g~l~~~l~~~  121 (311)
T d1t46a_          98 IGGPTLVITEYCCYGDLLNFLRRK  121 (311)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHT
T ss_pred             eCCEEEEEEEcCCCCCHHHHHHhc
Confidence            999999999999999999999875

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=6.8e-15  Score=108.99  Aligned_cols=80  Identities=23%  Similarity=0.323  Sum_probs=67.3

Q ss_pred             cCCCeEEEEEeccCCceEEEe-------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeE
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI-------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYS  126 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~-------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~  126 (156)
                      ..++|+++++||+|+||.||+                         +..+.+.+|+.+|+.++|||||++++++.++ ..
T Consensus         7 k~~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~   85 (317)
T d1xkka_           7 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV   85 (317)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SE
T ss_pred             CHHHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-Ce
Confidence            346799999999999999998                         2234689999999999999999999999764 57


Q ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          127 RLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       127 ~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      ++++|++.+|+|.+++... ...+++.
T Consensus        86 ~~v~e~~~~~~l~~~~~~~-~~~~~~~  111 (317)
T d1xkka_          86 QLITQLMPFGCLLDYVREH-KDNIGSQ  111 (317)
T ss_dssp             EEEEECCTTCBHHHHHHHT-SSSCCHH
T ss_pred             eEEEEeccCCccccccccc-ccCCCHH
Confidence            8889999999999998875 3556654

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.1e-15  Score=111.22  Aligned_cols=80  Identities=24%  Similarity=0.335  Sum_probs=63.3

Q ss_pred             cCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCe
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHY  125 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~  125 (156)
                      ..++|++.+.||+|+||.||+                          +..+.+.+|+.+|..++|||||++++++.+ +.
T Consensus         6 ~~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~   84 (273)
T d1u46a_           6 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PP   84 (273)
T ss_dssp             CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred             chHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cc
Confidence            457799999999999999998                          123468999999999999999999999976 46


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      +++||||+++|+|.+++..+ .+.+++.
T Consensus        85 ~~lv~e~~~~~~l~~~~~~~-~~~l~~~  111 (273)
T d1u46a_          85 MKMVTELAPLGSLLDRLRKH-QGHFLLG  111 (273)
T ss_dssp             CEEEEECCTTCBHHHHHHHH-GGGSCHH
T ss_pred             hheeeeeecCcchhhhhhcc-cCCCCHH
Confidence            78999999999999988765 2456654

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.5e-15  Score=112.96  Aligned_cols=83  Identities=29%  Similarity=0.636  Sum_probs=71.7

Q ss_pred             CccCCCeEEEEEeccCCceEEEe---------------c------------hhhhHHHHHHHHHhCCC-CCCCceeEEEE
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI---------------K------------KRNRVHIEKEILKMLDH-PFLPSLFAEFE  121 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~---------------~------------~~~~~~~E~~~l~~~~h-~~iv~l~~~~~  121 (156)
                      +..+++|++++.||+|+||.||+               |            ..+.+.+|+.+|..++| |||+++++++.
T Consensus        20 ~~~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~   99 (322)
T d1vzoa_          20 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ   99 (322)
T ss_dssp             CCCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE
T ss_pred             ccchhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeec
Confidence            45678899999999999999998               1            12457799999999965 89999999999


Q ss_pred             eCCeEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          122 ASHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       122 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      +...++++|||+.+|+|.+++...  +.++|..
T Consensus       100 ~~~~~~~v~e~~~~~~L~~~i~~~--~~~~e~~  130 (322)
T d1vzoa_         100 TETKLHLILDYINGGELFTHLSQR--ERFTEHE  130 (322)
T ss_dssp             ETTEEEEEECCCCSCBHHHHHHHH--SCCCHHH
T ss_pred             cCCceeeeeecccccHHHHHHHhc--ccccHHH
Confidence            999999999999999999999886  6666543

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.4e-15  Score=111.65  Aligned_cols=76  Identities=21%  Similarity=0.298  Sum_probs=64.0

Q ss_pred             EEEEeccCCceEEEe------------c-------------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEec
Q 043174           78 LFRRLGSGIIRSVYI------------K-------------KRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIEY  132 (156)
Q Consensus        78 ~~~~lG~G~~g~V~~------------~-------------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E~  132 (156)
                      .+++||+|+||+||+            |             ..+.+.+|+.+|..++|||||++++++.+++.+|+||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            468899999999999            1             123578999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHhcCCCCCCCCCc
Q 043174          133 CPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       133 ~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      +.++++..++...  +.++|..+
T Consensus        82 ~~~~~~~~~~~~~--~~l~~~~~  102 (299)
T d1ua2a_          82 METDLEVIIKDNS--LVLTPSHI  102 (299)
T ss_dssp             CSEEHHHHHTTCC--SSCCSSHH
T ss_pred             hcchHHhhhhhcc--cCCCHHHH
Confidence            9988777666543  67887754

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.54  E-value=2e-15  Score=110.18  Aligned_cols=81  Identities=19%  Similarity=0.192  Sum_probs=69.7

Q ss_pred             CCCeEEEEEeccCCceEEEe---------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEEe
Q 043174           73 LDQFQLFRRLGSGIIRSVYI---------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVIE  131 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~---------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~E  131 (156)
                      +++|+++++||+|+||.||+                     ...+.+.+|+.+|+.++|||||++++++.+++.++++||
T Consensus         1 ~~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e   80 (286)
T d1ob3a_           1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE   80 (286)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             CCCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEE
Confidence            47899999999999999999                     123568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      ++.++.+..+.+..  +.++|..+
T Consensus        81 ~~~~~~~~~~~~~~--~~l~~~~~  102 (286)
T d1ob3a_          81 HLDQDLKKLLDVCE--GGLESVTA  102 (286)
T ss_dssp             CCSEEHHHHHHTST--TCCCHHHH
T ss_pred             eehhhhHHHHHhhc--CCcchhhh
Confidence            99987777776654  77877643

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=4.4e-15  Score=109.19  Aligned_cols=77  Identities=23%  Similarity=0.338  Sum_probs=62.9

Q ss_pred             CCccCCCeEEEEEeccCCceEEEe----------------------------chhhhHHHHHHHHHhC-CCCCCCceeEE
Q 043174           69 GQVGLDQFQLFRRLGSGIIRSVYI----------------------------KKRNRVHIEKEILKML-DHPFLPSLFAE  119 (156)
Q Consensus        69 ~~~~~~~~~~~~~lG~G~~g~V~~----------------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~  119 (156)
                      +.+..++|++.+.||+|+||.||+                            +....+.+|...+..+ +|||||+++++
T Consensus         8 ~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~   87 (299)
T d1fgka_           8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA   87 (299)
T ss_dssp             TBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             CcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccc
Confidence            456678999999999999999998                            1234578888888887 89999999999


Q ss_pred             EEeCCeEEEEEeccCCCCHHHHHHhc
Q 043174          120 FEASHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       120 ~~~~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +.+++.+++||||+++|+|.++|+.+
T Consensus        88 ~~~~~~~~~v~e~~~~g~l~~~i~~~  113 (299)
T d1fgka_          88 CTQDGPLYVIVEYASKGNLREYLQAR  113 (299)
T ss_dssp             ECSSSSCEEEECCCTTCBHHHHHHTT
T ss_pred             cccCCeEEEEEEccCCCcHHHHHHhh
Confidence            99999999999999999999999865

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.53  E-value=8.5e-15  Score=107.71  Aligned_cols=76  Identities=18%  Similarity=0.308  Sum_probs=68.5

Q ss_pred             CccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS  123 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~  123 (156)
                      .+..++|++++.||+|+||.||+                          +..+.+.+|+.+|+.++||||+++++++.+.
T Consensus         9 e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~   88 (301)
T d1lufa_           9 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG   88 (301)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             cCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccC
Confidence            45567899999999999999997                          1235689999999999999999999999999


Q ss_pred             CeEEEEEeccCCCCHHHHHHhc
Q 043174          124 HYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       124 ~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                      +.++++|||+++|+|.++|+..
T Consensus        89 ~~~~~v~e~~~~g~L~~~l~~~  110 (301)
T d1lufa_          89 KPMCLLFEYMAYGDLNEFLRSM  110 (301)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHT
T ss_pred             CceEEEEEecCCCcHHHHHHhc
Confidence            9999999999999999999864

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=6.9e-15  Score=107.25  Aligned_cols=80  Identities=16%  Similarity=0.230  Sum_probs=70.5

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCCeEEEEE
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASHYSRLVI  130 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~~~~lv~  130 (156)
                      +++|++++.||+|+||+||+                      .....+.+|+.+|+.++||||+++++++.+...+++++
T Consensus         1 ~~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~   80 (292)
T d1unla_           1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF   80 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEe
Confidence            46899999999999999999                      22456889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHHHhcCCCCCCCCC
Q 043174          131 EYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       131 E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      |++.+++|..+++..  +.+++..
T Consensus        81 ~~~~~~~l~~~~~~~--~~~~~~~  102 (292)
T d1unla_          81 EFCDQDLKKYFDSCN--GDLDPEI  102 (292)
T ss_dssp             ECCSEEHHHHHHHTT--TCCCHHH
T ss_pred             eeccccccccccccc--cccchhH
Confidence            999999998888775  6666543

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=4.8e-15  Score=107.71  Aligned_cols=81  Identities=28%  Similarity=0.258  Sum_probs=68.5

Q ss_pred             CCCeEEEEEeccCCceEEEe------------ch--------------hhhHHHHHHHHHhCC--CCCCCceeEEEEeCC
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------KK--------------RNRVHIEKEILKMLD--HPFLPSLFAEFEASH  124 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~~--------------~~~~~~E~~~l~~~~--h~~iv~l~~~~~~~~  124 (156)
                      .++|++.+.||+|+||.||+            |.              ...+.+|+.+|+.++  |||||++++++.+++
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~   82 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD   82 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred             CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC
Confidence            36799999999999999998            11              123678999999986  899999999999999


Q ss_pred             eEEEEEeccCC-CCHHHHHHhcCCCCCCCCCc
Q 043174          125 YSRLVIEYCPG-GDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       125 ~~~lv~E~~~~-g~L~~~l~~~~~~~~~e~~a  155 (156)
                      .+|+||||+.+ +++.+++++.  +.++|+.+
T Consensus        83 ~~~lv~e~~~~~~~l~~~~~~~--~~l~e~~~  112 (273)
T d1xwsa_          83 SFVLILERPEPVQDLFDFITER--GALQEELA  112 (273)
T ss_dssp             EEEEEEECCSSEEEHHHHHHHH--CSCCHHHH
T ss_pred             eEEEEEEeccCcchHHHHHhcc--CCCCHHHH
Confidence            99999999976 6888898876  67887654

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.2e-13  Score=102.04  Aligned_cols=69  Identities=23%  Similarity=0.307  Sum_probs=60.0

Q ss_pred             EEEEEeccCCceEEEe------------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe-CCeEEEEEe
Q 043174           77 QLFRRLGSGIIRSVYI------------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA-SHYSRLVIE  131 (156)
Q Consensus        77 ~~~~~lG~G~~g~V~~------------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~-~~~~~lv~E  131 (156)
                      ...++||+|+||.||+                        ...+.+.+|+++|.+++|||||++++++.+ ++.+++|||
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E  109 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP  109 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEE
Confidence            3367899999999997                        234568999999999999999999998765 568999999


Q ss_pred             ccCCCCHHHHHHhc
Q 043174          132 YCPGGDLLTVSQRQ  145 (156)
Q Consensus       132 ~~~~g~L~~~l~~~  145 (156)
                      ||++|+|.+++...
T Consensus       110 ~~~~g~l~~~~~~~  123 (311)
T d1r0pa_         110 YMKHGDLRNFIRNE  123 (311)
T ss_dssp             CCTTCBHHHHHHCT
T ss_pred             EeecCchhhhhccc
Confidence            99999999998864

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1.4e-13  Score=101.26  Aligned_cols=72  Identities=24%  Similarity=0.296  Sum_probs=58.5

Q ss_pred             CCeEEEEEeccCCceEEEe---------------chhhhHHHHHHHH--HhCCCCCCCceeEEEEeCC----eEEEEEec
Q 043174           74 DQFQLFRRLGSGIIRSVYI---------------KKRNRVHIEKEIL--KMLDHPFLPSLFAEFEASH----YSRLVIEY  132 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~---------------~~~~~~~~E~~~l--~~~~h~~iv~l~~~~~~~~----~~~lv~E~  132 (156)
                      .+|.+.+.||+|+||.||+               +..+.+.+|.+++  ..++|||||++++++.+.+    .+|+||||
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey   82 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY   82 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEec
Confidence            4588999999999999998               2233455555555  4679999999999987654    68999999


Q ss_pred             cCCCCHHHHHHhc
Q 043174          133 CPGGDLLTVSQRQ  145 (156)
Q Consensus       133 ~~~g~L~~~l~~~  145 (156)
                      +++|+|.++|++.
T Consensus        83 ~~~g~L~~~l~~~   95 (303)
T d1vjya_          83 HEHGSLFDYLNRY   95 (303)
T ss_dssp             CTTCBHHHHHHHC
T ss_pred             ccCCCHHHHHhcC
Confidence            9999999999874

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.42  E-value=4.5e-14  Score=104.75  Aligned_cols=79  Identities=25%  Similarity=0.333  Sum_probs=64.9

Q ss_pred             cCCCeEEEEEeccCCceEEEe-----------------chhhhHHHHHHHHHhCC-CCCCCceeEEEEe--CCeEEEEEe
Q 043174           72 GLDQFQLFRRLGSGIIRSVYI-----------------KKRNRVHIEKEILKMLD-HPFLPSLFAEFEA--SHYSRLVIE  131 (156)
Q Consensus        72 ~~~~~~~~~~lG~G~~g~V~~-----------------~~~~~~~~E~~~l~~~~-h~~iv~l~~~~~~--~~~~~lv~E  131 (156)
                      ..++|++++.||+|+||.||+                 ...+.+.+|+.+|..+. ||||+++++++..  ...+++|||
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e  112 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE  112 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEE
T ss_pred             CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEe
Confidence            347899999999999999999                 12456889999999985 9999999999985  456999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          132 YCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       132 ~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      ||.+|+|..+.     +.++|..+
T Consensus       113 ~~~~~~L~~~~-----~~l~e~~i  131 (328)
T d3bqca1         113 HVNNTDFKQLY-----QTLTDYDI  131 (328)
T ss_dssp             CCCSCBGGGTT-----TSCCHHHH
T ss_pred             ecCCCcHHHHh-----cCCCHHHH
Confidence            99999987653     34665543

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=3.7e-14  Score=105.95  Aligned_cols=79  Identities=20%  Similarity=0.240  Sum_probs=59.9

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeCC------
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEASH------  124 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~------  124 (156)
                      .+.|++++.||+|+||.||+                      ...+.+.+|+.+|+.++|||||+++++|...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            57899999999999999999                      12346789999999999999999999998755      


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      .+|+||||+ +++|..+++.   +.++|..+
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~---~~l~~~~~  123 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKH---EKLGEDRI  123 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHH---CCCCHHHH
T ss_pred             eEEEEEecc-cccHHHHHHh---ccccHHHH
Confidence            579999999 5678877765   56777543

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=2.9e-14  Score=106.44  Aligned_cols=80  Identities=21%  Similarity=0.289  Sum_probs=64.8

Q ss_pred             CCCeEEEEEeccCCceEEEe------------c----------hhhhHHHHHHHHHhCCCCCCCceeEEEEeC-----Ce
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------K----------KRNRVHIEKEILKMLDHPFLPSLFAEFEAS-----HY  125 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------~----------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~-----~~  125 (156)
                      .++|++++.||+|+||.||+            |          ..+.+.+|+.+|+.++|||||++++++...     ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            36799999999999999999            1          223578999999999999999999998643     23


Q ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          126 SRLVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       126 ~~lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      .+++|+++.||+|.++++.   +.++|..+
T Consensus        97 ~~~i~~~~~gg~L~~~~~~---~~l~e~~~  123 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKC---QKLTDDHV  123 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTT---CCCCHHHH
T ss_pred             eEEEEEeecCCchhhhccc---ccccHHHH
Confidence            4566777889999999976   46877654

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=8.9e-14  Score=103.95  Aligned_cols=78  Identities=21%  Similarity=0.172  Sum_probs=60.2

Q ss_pred             CCeEEEEEeccCCceEEEe------------c---------hhhhHHHHHHHHHhCCCCCCCceeEEEEeCC-----eEE
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K---------KRNRVHIEKEILKMLDHPFLPSLFAEFEASH-----YSR  127 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~---------~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~~-----~~~  127 (156)
                      ++|.+++.||+|+||.||+            |         ..+.+.+|+.+|..++||||+++++++..+.     .+|
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~   87 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY   87 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence            5699999999999999999            1         2346789999999999999999999987643     345


Q ss_pred             EEEeccCCCCHHHHHHhcCCCCCCCCCc
Q 043174          128 LVIEYCPGGDLLTVSQRQRRLRFSIPSA  155 (156)
Q Consensus       128 lv~E~~~~g~L~~~l~~~~~~~~~e~~a  155 (156)
                      ++ +++.+|+|+++++.   +.++|..+
T Consensus        88 l~-~~~~~g~L~~~l~~---~~l~~~~i  111 (345)
T d1pmea_          88 LV-THLMGADLYKLLKT---QHLSNDHI  111 (345)
T ss_dssp             EE-EECCCEEHHHHHHH---CCCCHHHH
T ss_pred             EE-EeecCCchhhhhhc---CCCCHHHH
Confidence            54 55678999999987   46777543

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=2.6e-13  Score=99.44  Aligned_cols=76  Identities=21%  Similarity=0.306  Sum_probs=62.8

Q ss_pred             CccCCCeEEEEEeccCCceEEEe--------------------------chhhhHHHHHHHHHhC-CCCCCCceeEEEEe
Q 043174           70 QVGLDQFQLFRRLGSGIIRSVYI--------------------------KKRNRVHIEKEILKML-DHPFLPSLFAEFEA  122 (156)
Q Consensus        70 ~~~~~~~~~~~~lG~G~~g~V~~--------------------------~~~~~~~~E~~~l~~~-~h~~iv~l~~~~~~  122 (156)
                      .+..++|++.+.||+|+||.||+                          ...+.+.+|+.++..+ +|+||+.+++++..
T Consensus         9 ei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~   88 (299)
T d1ywna1           9 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK   88 (299)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeecc
Confidence            45668899999999999999997                          1233567777777766 79999999998765


Q ss_pred             -CCeEEEEEeccCCCCHHHHHHhc
Q 043174          123 -SHYSRLVIEYCPGGDLLTVSQRQ  145 (156)
Q Consensus       123 -~~~~~lv~E~~~~g~L~~~l~~~  145 (156)
                       ...++++||||++|+|.++|+..
T Consensus        89 ~~~~~~iv~E~~~~g~L~~~l~~~  112 (299)
T d1ywna1          89 PGGPLMVIVEFCKFGNLSTYLRSK  112 (299)
T ss_dssp             TTSCCEEEEECCTTCBHHHHHHHT
T ss_pred             CCCeEEEEEEecCCCcHHHHHHhc
Confidence             45699999999999999999864

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=9.8e-14  Score=103.92  Aligned_cols=82  Identities=21%  Similarity=0.284  Sum_probs=60.4

Q ss_pred             CCeEEEEEeccCCceEEEe----------------chhhhHHHHHHHHHhCCCCCCCceeEEEEeC------CeEEEEEe
Q 043174           74 DQFQLFRRLGSGIIRSVYI----------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEAS------HYSRLVIE  131 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~----------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~~------~~~~lv~E  131 (156)
                      -+|..+++||+|+||.||+                +......+|+.+|+.++||||++++++|...      ..+|+|||
T Consensus        20 ~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~E   99 (350)
T d1q5ka_          20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD   99 (350)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEE
T ss_pred             CCcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEe
Confidence            3589999999999999999                1223456899999999999999999998543      35899999


Q ss_pred             ccCCCCHHHHHHh-cCCCCCCCCCc
Q 043174          132 YCPGGDLLTVSQR-QRRLRFSIPSA  155 (156)
Q Consensus       132 ~~~~g~L~~~l~~-~~~~~~~e~~a  155 (156)
                      ||++|.+..+... .....++|.++
T Consensus       100 y~~~~~~~~l~~~~~~~~~l~~~~~  124 (350)
T d1q5ka_         100 YVPETVYRVARHYSRAKQTLPVIYV  124 (350)
T ss_dssp             CCSEEHHHHHHHHHHTTCCCCHHHH
T ss_pred             ccCCccHHHHHhhhhccCCCCHHHH
Confidence            9986543333221 11356776543

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=5.6e-13  Score=99.88  Aligned_cols=77  Identities=25%  Similarity=0.325  Sum_probs=60.1

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe------CC
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA------SH  124 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~------~~  124 (156)
                      .++|+++++||+|+||+||+                      .....+.+|+.+++.++|||||+++++|..      ..
T Consensus        16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~   95 (355)
T d2b1pa1          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ   95 (355)
T ss_dssp             ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCc
Confidence            36799999999999999999                      122357899999999999999999999964      36


Q ss_pred             eEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          125 YSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       125 ~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                      .+|+|||||.+ ++.+.+.    +.+++..
T Consensus        96 ~~~iv~Ey~~~-~l~~~~~----~~~~~~~  120 (355)
T d2b1pa1          96 DVYLVMELMDA-NLCQVIQ----MELDHER  120 (355)
T ss_dssp             EEEEEEECCSE-EHHHHHT----SCCCHHH
T ss_pred             eeEEEEeccch-HHHHhhh----cCCCHHH
Confidence            89999999975 5666554    3466543

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=3.1e-13  Score=99.65  Aligned_cols=79  Identities=18%  Similarity=0.310  Sum_probs=62.0

Q ss_pred             CCCeEEEEEeccCCceEEEe----------------------chhhhHHHHHHHHHhCCCCCCCceeEEEEe--------
Q 043174           73 LDQFQLFRRLGSGIIRSVYI----------------------KKRNRVHIEKEILKMLDHPFLPSLFAEFEA--------  122 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~----------------------~~~~~~~~E~~~l~~~~h~~iv~l~~~~~~--------  122 (156)
                      .++|++++.||+|+||.||+                      .....+.+|+.+|+.++||||+++++++..        
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            57899999999999999999                      123457899999999999999999998855        


Q ss_pred             CCeEEEEEeccCCCCHHHHHHhcCCCCCCCC
Q 043174          123 SHYSRLVIEYCPGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       123 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~  153 (156)
                      .+.+|++|||+.++.+..+....  ..+++.
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~~~--~~~~~~  117 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSNVL--VKFTLS  117 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTCTT--CCCCHH
T ss_pred             CceEEEEEeccCCCccchhhhcc--cccccH
Confidence            34689999999876655444432  556554

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=4.8e-13  Score=98.06  Aligned_cols=81  Identities=19%  Similarity=0.201  Sum_probs=61.5

Q ss_pred             CCCeEEEEEeccCCceEEEe-------------c----------hhhhHHHHHHHHHhC---CCCCCCceeEEEEe----
Q 043174           73 LDQFQLFRRLGSGIIRSVYI-------------K----------KRNRVHIEKEILKML---DHPFLPSLFAEFEA----  122 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~-------------~----------~~~~~~~E~~~l~~~---~h~~iv~l~~~~~~----  122 (156)
                      .++|++++.||+|+||.||+             |          ....+.+|+.+|+.+   +||||+++++++..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            46899999999999999999             1          123567888887765   89999999998864    


Q ss_pred             -CCeEEEEEeccCCCCHHHHHHhcCCCCCCCCC
Q 043174          123 -SHYSRLVIEYCPGGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       123 -~~~~~lv~E~~~~g~L~~~l~~~~~~~~~e~~  154 (156)
                       ...++++|||+.+|.+....... ...++++.
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~-~~~~~~~~  117 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVP-EPGVPTET  117 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSC-TTCSCHHH
T ss_pred             cCceEEEEEEeccCCchhhhhhcc-CCCCCHHH
Confidence             34789999999987665444433 45566654

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.28  E-value=7.1e-12  Score=91.51  Aligned_cols=79  Identities=19%  Similarity=0.252  Sum_probs=66.6

Q ss_pred             CCCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCC-CCCCceeEEEEeCCeEEEEEecc
Q 043174           73 LDQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDH-PFLPSLFAEFEASHYSRLVIEYC  133 (156)
Q Consensus        73 ~~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h-~~iv~l~~~~~~~~~~~lv~E~~  133 (156)
                      .++|++.+.||+|+||.||+                  .....+.+|++++..+.| +|++.+++++......++||||+
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~   83 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL   83 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence            46899999999999999999                  123457899999999964 89999999999999999999999


Q ss_pred             CCCCHHHHHHhcCCCCCCCC
Q 043174          134 PGGDLLTVSQRQRRLRFSIP  153 (156)
Q Consensus       134 ~~g~L~~~l~~~~~~~~~e~  153 (156)
                       +|+|.++++.. .+.+++.
T Consensus        84 -~~~l~~~~~~~-~~~~~~~  101 (293)
T d1csna_          84 -GPSLEDLLDLC-GRKFSVK  101 (293)
T ss_dssp             -CCBHHHHHHHT-TTCCCHH
T ss_pred             -CCCHHHHHHhh-ccchhhH
Confidence             68999998765 3456543

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.18  E-value=4.9e-11  Score=86.99  Aligned_cols=79  Identities=25%  Similarity=0.411  Sum_probs=61.3

Q ss_pred             CCeEEEEEeccCCceEEEe------------------chhhhHHHHHHHHHhCCCCCC-CceeEEEEeCCeEEEEEeccC
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------------KKRNRVHIEKEILKMLDHPFL-PSLFAEFEASHYSRLVIEYCP  134 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------------~~~~~~~~E~~~l~~~~h~~i-v~l~~~~~~~~~~~lv~E~~~  134 (156)
                      ++|++.+.||+|+||.||+                  .....+..|+++++.++|+++ +.+..++.+.+..++||||+.
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~   86 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG   86 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcC
Confidence            5699999999999999999                  223468899999999976665 555666778889999999994


Q ss_pred             CCCHHHHHHhcCCCCCCCCC
Q 043174          135 GGDLLTVSQRQRRLRFSIPS  154 (156)
Q Consensus       135 ~g~L~~~l~~~~~~~~~e~~  154 (156)
                       |+|...+... .+.+++..
T Consensus        87 -~~l~~~~~~~-~~~~~~~~  104 (299)
T d1ckia_          87 -PSLEDLFNFC-SRKFSLKT  104 (299)
T ss_dssp             -CBHHHHHHHT-TTCCCHHH
T ss_pred             -Cchhhhhhhc-cCCCcHHH
Confidence             6777776654 35666543

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.37  E-value=4.1e-07  Score=67.10  Aligned_cols=68  Identities=21%  Similarity=0.351  Sum_probs=51.1

Q ss_pred             CCeEEEEEeccCCceEEEe------------c-------hhhhHHHHHHHHHhCC-----------CCCCCceeEEEEe-
Q 043174           74 DQFQLFRRLGSGIIRSVYI------------K-------KRNRVHIEKEILKMLD-----------HPFLPSLFAEFEA-  122 (156)
Q Consensus        74 ~~~~~~~~lG~G~~g~V~~------------~-------~~~~~~~E~~~l~~~~-----------h~~iv~l~~~~~~-  122 (156)
                      +.|+++++||+|+||.||+            |       ..+.+.+|+.+++.++           |+||+++++++.. 
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            4599999999999999999            1       1245688999888764           5789999887754 


Q ss_pred             -CCeEEEEEeccCCCCHHHH
Q 043174          123 -SHYSRLVIEYCPGGDLLTV  141 (156)
Q Consensus       123 -~~~~~lv~E~~~~g~L~~~  141 (156)
                       ....+++++++..++....
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~  112 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLA  112 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHH
T ss_pred             cccceeeeeeeccccccccc
Confidence             5677777777766654333

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.06  E-value=3.2e-06  Score=56.99  Aligned_cols=58  Identities=19%  Similarity=0.229  Sum_probs=44.3

Q ss_pred             EEEEEeccCCceEEEe-----------ch--------------------------hhhHHHHHHHHHhCCCCCCCceeEE
Q 043174           77 QLFRRLGSGIIRSVYI-----------KK--------------------------RNRVHIEKEILKMLDHPFLPSLFAE  119 (156)
Q Consensus        77 ~~~~~lG~G~~g~V~~-----------~~--------------------------~~~~~~E~~~l~~~~h~~iv~l~~~  119 (156)
                      .+.++||+|+||.||+           |.                          ......|...+..+.|++++..++.
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~   82 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW   82 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred             hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence            5788999999999999           10                          1224567888999999999988764


Q ss_pred             EEeCCeEEEEEeccCCCCH
Q 043174          120 FEASHYSRLVIEYCPGGDL  138 (156)
Q Consensus       120 ~~~~~~~~lv~E~~~~g~L  138 (156)
                      .  .  .+++|||++++.+
T Consensus        83 ~--~--~~lvme~~~~~~~   97 (191)
T d1zara2          83 E--G--NAVLMELIDAKEL   97 (191)
T ss_dssp             E--T--TEEEEECCCCEEG
T ss_pred             c--C--CEEEEEeeccccc
Confidence            3  2  2789999998654

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.44  E-value=0.21  Score=33.61  Aligned_cols=46  Identities=17%  Similarity=0.161  Sum_probs=35.6

Q ss_pred             hhHHHHHHHHHhCC-CCCCCceeEEEEeCCeEEEEEeccCCCCHHHH
Q 043174           96 NRVHIEKEILKMLD-HPFLPSLFAEFEASHYSRLVIEYCPGGDLLTV  141 (156)
Q Consensus        96 ~~~~~E~~~l~~~~-h~~iv~l~~~~~~~~~~~lv~E~~~~g~L~~~  141 (156)
                      ..+.+|..++..+. +--+.+++....+++..++||++++|..+...
T Consensus        54 ~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~  100 (263)
T d1j7la_          54 YDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEE  100 (263)
T ss_dssp             TCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHH
T ss_pred             hhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccccccccc
Confidence            35788998888763 44466778888889999999999998877543

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=86.36  E-value=1.3  Score=29.21  Aligned_cols=44  Identities=20%  Similarity=0.207  Sum_probs=33.6

Q ss_pred             hhhHHHHHHHHHhCC--CCCCCceeEEEEeCCeEEEEEeccCCCCH
Q 043174           95 RNRVHIEKEILKMLD--HPFLPSLFAEFEASHYSRLVIEYCPGGDL  138 (156)
Q Consensus        95 ~~~~~~E~~~l~~~~--h~~iv~l~~~~~~~~~~~lv~E~~~~g~L  138 (156)
                      ...+..|+..++.+.  .-.+.+++....+++..++||++++|.++
T Consensus        48 ~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          48 LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            446788999888763  33456778877888889999999988654