BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043178
(109 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LW96|INO1_TOBAC Inositol-3-phosphate synthase OS=Nicotiana tabacum PE=2 SV=1
Length = 510
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 19/97 (19%)
Query: 16 ILALIVFAIRSNSR-RDEELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLS 68
+ LI AI+ N+ ++ K G+TKMKSV+V FLV AGI SYNHLGNND M LS
Sbjct: 288 VPGLIDLAIKRNTLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLS 347
Query: 69 AQP-----------IIPKAASSPAVMYFEPSEHTNRL 94
A ++ SS A++Y EP EH + +
Sbjct: 348 APQTFRSKEISKSNVVDDMVSSNAILY-EPGEHPDHV 383
>sp|Q40271|INO1_MESCR Inositol-3-phosphate synthase OS=Mesembryanthemum crystallinum PE=2
SV=1
Length = 512
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 65/139 (46%), Gaps = 47/139 (33%)
Query: 1 MVNLLASLEKIKEAEI---------------------------LALIVFAIRSNSR-RDE 32
M NLLASLEK E+EI LI AI+ NS +
Sbjct: 249 MENLLASLEK-NESEISPSTSYALACIEENIPFINGSPQNTFVPGLIDLAIKKNSLIGGD 307
Query: 33 ELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLSAQP-----------IIPK 75
+ K G+TKMKSV+V FLV AGI SYNHLGNND M LSA ++
Sbjct: 308 DFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDD 367
Query: 76 AASSPAVMYFEPSEHTNRL 94
+S ++Y EP EH + +
Sbjct: 368 MVASNGILY-EPGEHPDHV 385
>sp|Q9FPK7|INO1_MAIZE Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2
Length = 510
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 19/97 (19%)
Query: 16 ILALIVFAIRSNSR-RDEELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLS 68
+ LI AI++N ++ K G+TKMKSV+V FLV AGI SYNHLGNND M LS
Sbjct: 288 VPGLIDLAIKNNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLS 347
Query: 69 AQP-----------IIPKAASSPAVMYFEPSEHTNRL 94
A ++ SS A++Y EP EH + +
Sbjct: 348 APQAFRSKEISKSNVVDDMVSSNAILY-EPGEHPDHV 383
>sp|P42803|INO1_SPIPO Inositol-3-phosphate synthase OS=Spirodela polyrrhiza GN=TUR1 PE=2
SV=1
Length = 510
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 53/97 (54%), Gaps = 19/97 (19%)
Query: 16 ILALIVFAIRSNSR-RDEELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLS 68
+ LI AI+ NS ++ K G+TKMKSV+V FLV AGI SYNHLGNND M LS
Sbjct: 288 VPGLIEMAIKRNSLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLS 347
Query: 69 AQP-----------IIPKAASSPAVMYFEPSEHTNRL 94
A ++ SS ++Y EP EH + +
Sbjct: 348 APQTFRSKEISKSNVVDDMVSSNGILY-EPGEHPDHV 383
>sp|Q9FYV1|INO1_SESIN Inositol-3-phosphate synthase OS=Sesamum indicum PE=2 SV=1
Length = 510
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 19/97 (19%)
Query: 16 ILALIVFAIRSNSR-RDEELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLS 68
+ LI AI+ NS ++ K G+TKMKSV+V FLV AGI SYNHLGNND M LS
Sbjct: 288 VPGLIDLAIQRNSLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLS 347
Query: 69 AQP-----------IIPKAASSPAVMYFEPSEHTNRL 94
A ++ +S ++Y EP EH + +
Sbjct: 348 APQTFRSKEISKSNVVDDMVASNGILY-EPGEHPDHI 383
>sp|O65195|INO1_HORVU Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1
Length = 510
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 19/97 (19%)
Query: 16 ILALIVFAIRSNSR-RDEELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLS 68
+ LI AI+++ ++ K G+TKMKSV+V FLV AGI SYNHLGNND M LS
Sbjct: 288 VPGLIDLAIKNDCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLS 347
Query: 69 AQP-----------IIPKAASSPAVMYFEPSEHTNRL 94
A ++ SS A++Y EP EH + +
Sbjct: 348 APQTFRSKEISKSNVVDDMVSSNAILY-EPGEHPDHV 383
>sp|P42801|INO1_ARATH Inositol-3-phosphate synthase isozyme 1 OS=Arabidopsis thaliana
GN=At4g39800 PE=2 SV=3
Length = 511
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 19/97 (19%)
Query: 16 ILALIVFAIRSNSR-RDEELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLS 68
+ LI AIR+N ++ K G+TKMKSV+V FLV AGI SYNHLGNND M LS
Sbjct: 289 VPGLIDMAIRNNVLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLS 348
Query: 69 AQP-----------IIPKAASSPAVMYFEPSEHTNRL 94
A ++ +S ++ FEP EH + +
Sbjct: 349 APQTFRSKEISKSNVVDDMVASNGIL-FEPGEHPDHV 384
>sp|Q96348|INO1_BRANA Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2
Length = 510
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 19/97 (19%)
Query: 16 ILALIVFAIRSNSR-RDEELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLS 68
+ LI AI++N ++ K G+TKMKSV+V FLV AGI SYNHLGNND M LS
Sbjct: 288 VPGLIDLAIKNNVLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLS 347
Query: 69 AQP-----------IIPKAASSPAVMYFEPSEHTNRL 94
A ++ +S ++ FEP EH + +
Sbjct: 348 APQTFRSKEISKSNVVDDMVASNGIL-FEPGEHPDHV 383
>sp|Q9LX12|INO3_ARATH Probable inositol 3-phosphate synthase isozyme 3 OS=Arabidopsis
thaliana GN=At5g10170 PE=2 SV=1
Length = 510
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 19/97 (19%)
Query: 16 ILALIVFAIRSNSR-RDEELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLS 68
+ LI AI+ N ++ K G+TKMKSV+V FLV AGI SYNHLGNND M LS
Sbjct: 288 VPGLIELAIKRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLS 347
Query: 69 AQP-----------IIPKAASSPAVMYFEPSEHTNRL 94
A ++ S ++Y EP EH + +
Sbjct: 348 APQTFRSKEISKSNVVDDMVGSNGILY-EPGEHPDHV 383
>sp|Q9SSV4|INO1_NICPA Inositol-3-phosphate synthase OS=Nicotiana paniculata GN=INPS1 PE=2
SV=1
Length = 510
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
Query: 18 ALIVFAIRSNSR-RDEELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLSA- 69
LI AI+ N+ ++ K G+TKMKSV+V FLV AGI SYNHLGNND M LSA
Sbjct: 290 GLIDLAIKKNTLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAP 349
Query: 70 ----------QPIIPKAASSPAVMYFEPSEHTNRL 94
++ SS A++Y EP EH + +
Sbjct: 350 QTFRSKEISKSNVVDDMVSSNAILY-EPGEHPDHV 383
>sp|Q9S7U0|INO1_WHEAT Inositol-3-phosphate synthase OS=Triticum aestivum GN=MIPS PE=2
SV=1
Length = 510
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 19/97 (19%)
Query: 16 ILALIVFAIRSNSR-RDEELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLS 68
+ LI AI N ++ K G+TKMKSV+V FLV AGI SYNHLGNND M LS
Sbjct: 288 VPGLIELAISKNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLS 347
Query: 69 AQP-----------IIPKAASSPAVMYFEPSEHTNRL 94
A ++ +S ++ FEP EH + +
Sbjct: 348 APQTFRSKEISKSNVVDDMVASNGIL-FEPGEHPDHV 383
>sp|Q38862|INO2_ARATH Inositol-3-phosphate synthase isozyme 2 OS=Arabidopsis thaliana
GN=At2g22240 PE=2 SV=2
Length = 510
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 19/97 (19%)
Query: 16 ILALIVFAIRSNSR-RDEELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLS 68
+ LI AI N ++ K G+TKMKSV+V FLV AGI SYNHLGNND M LS
Sbjct: 288 VPGLIELAISKNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLS 347
Query: 69 AQP-----------IIPKAASSPAVMYFEPSEHTNRL 94
A ++ +S ++ FEP EH + +
Sbjct: 348 APQTFRSKEISKSNVVDDMVASNGIL-FEPGEHPDHV 383
>sp|P42802|INO1_CITPA Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1
Length = 507
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 38/59 (64%), Gaps = 7/59 (11%)
Query: 18 ALIVFAIRSNSR-RDEELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLSA 69
LI AIR N ++ K G+TKMKSV+V FLV AGI SYNHLGNND M LSA
Sbjct: 290 GLIDLAIRRNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSA 348
>sp|Q41107|INO1_PHAVU Inositol-3-phosphate synthase OS=Phaseolus vulgaris PE=2 SV=1
Length = 511
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 52/97 (53%), Gaps = 19/97 (19%)
Query: 16 ILALIVFAIRSNSR-RDEELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLS 68
+ LI AIR+N ++ K G+TKMKSV+ FLV AGI SYNHLGNND M LS
Sbjct: 289 VPGLIDMAIRNNVLIGGDDFKSGQTKMKSVLGDFLVGAGIKPTSIVSYNHLGNNDGMNLS 348
Query: 69 AQP-----------IIPKAASSPAVMYFEPSEHTNRL 94
A ++ +S ++ FEP EH + +
Sbjct: 349 APQTFRSKEISKSNVVDDMVASNGIL-FEPGEHPDHV 384
>sp|O64437|INO1_ORYSJ Inositol-3-phosphate synthase OS=Oryza sativa subsp. japonica
GN=INO1 PE=2 SV=2
Length = 510
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 19/97 (19%)
Query: 16 ILALIVFAIRSNSR-RDEELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLS 68
+ LI AI++N ++ K G+TKMKSV+V FLV AGI SYNHLGNND M LS
Sbjct: 288 VPGLIDLAIKNNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLS 347
Query: 69 AQP-----------IIPKAASSPAVMYFEPSEHTNRL 94
A ++ SS A++Y E EH + +
Sbjct: 348 APQTFRSKEISKSNVVDDMVSSNAILY-ELGEHPDHV 383
>sp|Q2NL29|INO1_BOVIN Inositol-3-phosphate synthase 1 OS=Bos taurus GN=ISYNA1 PE=2 SV=1
Length = 557
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 32/46 (69%), Gaps = 6/46 (13%)
Query: 32 EELKIGKTKMKSVMVYFLVRAG------ISYNHLGNNDCMKLSAQP 71
++ K G+TK+KSV+V FL+ +G +SYNHLGNND LSA P
Sbjct: 302 DDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGQNLSAPP 347
>sp|P11986|INO1_YEAST Inositol-3-phosphate synthase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=INO1 PE=1 SV=3
Length = 533
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 31/44 (70%), Gaps = 6/44 (13%)
Query: 32 EELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLSA 69
++LK G+TK+KSV+ FLV AGI SYNHLGNND LSA
Sbjct: 319 DDLKSGQTKLKSVLAQFLVDAGIKPVSIASYNHLGNNDGYNLSA 362
>sp|Q6DDT1|INO1B_XENLA Inositol-3-phosphate synthase 1-B OS=Xenopus laevis GN=isyna1-b
PE=2 SV=2
Length = 563
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 36/57 (63%), Gaps = 7/57 (12%)
Query: 20 IVFAIRSNSR-RDEELKIGKTKMKSVMVYFLVRAG------ISYNHLGNNDCMKLSA 69
I AIR N ++ K G+TK+KSV++ FLV AG +SYNHLGNND LSA
Sbjct: 286 IELAIRHNVFIGGDDFKSGQTKIKSVLMDFLVSAGLKPVSIVSYNHLGNNDGKNLSA 342
>sp|O97477|INO1_DROME Inositol-3-phosphate synthase OS=Drosophila melanogaster GN=Inos
PE=1 SV=1
Length = 565
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 31/44 (70%), Gaps = 6/44 (13%)
Query: 32 EELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLSA 69
++ K G+TK+KSV+V FLV AGI SYNHLGNND LSA
Sbjct: 306 DDFKSGQTKIKSVLVDFLVGAGIKPVSIASYNHLGNNDGKNLSA 349
>sp|Q6FQI1|INO1_CANGA Inositol-3-phosphate synthase OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=INO1
PE=3 SV=1
Length = 538
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 30/44 (68%), Gaps = 6/44 (13%)
Query: 32 EELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLSA 69
++ K G+TKMKSV+ FLV AGI SYNHLGNND LS+
Sbjct: 322 DDFKSGQTKMKSVLAQFLVDAGIRPVSIASYNHLGNNDGYNLSS 365
>sp|Q54N49|INO1_DICDI Inositol-3-phosphate synthase OS=Dictyostelium discoideum GN=ino1
PE=3 SV=1
Length = 511
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 7/59 (11%)
Query: 18 ALIVFAIRSN-SRRDEELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLSA 69
A++ AI+ N S ++ K G+TK+KSV+ +LV AGI SYNHLGNND LSA
Sbjct: 290 AVVDLAIQHNVSIGGDDFKTGQTKIKSVLTDYLVSAGIKPVSIVSYNHLGNNDGKNLSA 348
>sp|Q6AYK3|INO1_RAT Inositol-3-phosphate synthase 1 OS=Rattus norvegicus GN=Isyna1 PE=3
SV=2
Length = 557
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 6/44 (13%)
Query: 32 EELKIGKTKMKSVMVYFLVRAG------ISYNHLGNNDCMKLSA 69
++ K G+TK+KSV+V FL+ +G +SYNHLGNND LSA
Sbjct: 302 DDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGQNLSA 345
>sp|Q9JHU9|INO1_MOUSE Inositol-3-phosphate synthase 1 OS=Mus musculus GN=Isyna1 PE=2 SV=1
Length = 557
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 6/44 (13%)
Query: 32 EELKIGKTKMKSVMVYFLVRAG------ISYNHLGNNDCMKLSA 69
++ K G+TK+KSV+V FL+ +G +SYNHLGNND LSA
Sbjct: 302 DDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGQNLSA 345
>sp|Q7ZXY0|INO1A_XENLA Inositol-3-phosphate synthase 1-A OS=Xenopus laevis GN=isyna1-a
PE=2 SV=1
Length = 563
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 31/44 (70%), Gaps = 6/44 (13%)
Query: 32 EELKIGKTKMKSVMVYFLVRAG------ISYNHLGNNDCMKLSA 69
++ K G+TK+KSV++ FLV AG +SYNHLGNND LSA
Sbjct: 299 DDFKSGQTKIKSVLMDFLVSAGLKPVSIVSYNHLGNNDGKNLSA 342
>sp|Q4R6E3|INO1_MACFA Inositol-3-phosphate synthase 1 OS=Macaca fascicularis GN=ISYNA1
PE=2 SV=1
Length = 559
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 6/44 (13%)
Query: 32 EELKIGKTKMKSVMVYFLVRAG------ISYNHLGNNDCMKLSA 69
++ K G+TK+KSV+V FL+ +G +SYNHLGNND LSA
Sbjct: 302 DDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGENLSA 345
>sp|Q9NPH2|INO1_HUMAN Inositol-3-phosphate synthase 1 OS=Homo sapiens GN=ISYNA1 PE=1 SV=1
Length = 558
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 6/44 (13%)
Query: 32 EELKIGKTKMKSVMVYFLVRAG------ISYNHLGNNDCMKLSA 69
++ K G+TK+KSV+V FL+ +G +SYNHLGNND LSA
Sbjct: 302 DDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGENLSA 345
>sp|P42800|INO1_CANAL Inositol-3-phosphate synthase OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=INO1 PE=1 SV=1
Length = 520
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 6/44 (13%)
Query: 32 EELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLSA 69
++ K G+TK+KSV+ FLV AGI SYNHLGNND LS+
Sbjct: 311 DDFKSGQTKIKSVLAQFLVDAGIKPLSIASYNHLGNNDGYNLSS 354
>sp|Q4P9K4|SEC24_USTMA Protein transport protein SEC24 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=SEC24 PE=3 SV=1
Length = 995
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 71 PIIPKAASSPAVMYFEPSEHTNRLHSSSHMNSNSIS 106
P+ P +A SPA P R + ++H+ +NSIS
Sbjct: 91 PVSPPSAGSPAPASIGPGASRRRAYPTAHLAANSIS 126
>sp|P03871|REP1_YEAST Partitioning protein REP1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=REP1 PE=1 SV=1
Length = 373
Score = 28.9 bits (63), Expect = 9.8, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 18/71 (25%)
Query: 9 EKIKEAEILALIVFAIRSNSRRDEELKIGKTKMKSVMVYFL-----------VRAGISYN 57
E EAEI+A + NS+R LKI +TK KSV+ + L V G S++
Sbjct: 267 EDQTEAEIIADRIIG---NSQRMANLKIRRTKFKSVLYHILKELIQSQGTVKVYRGSSFS 323
Query: 58 HLGNNDCMKLS 68
H D +K+S
Sbjct: 324 H----DSIKIS 330
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.128 0.348
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,537,225
Number of Sequences: 539616
Number of extensions: 1150844
Number of successful extensions: 2396
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2340
Number of HSP's gapped (non-prelim): 31
length of query: 109
length of database: 191,569,459
effective HSP length: 77
effective length of query: 32
effective length of database: 150,019,027
effective search space: 4800608864
effective search space used: 4800608864
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)