Query 043188
Match_columns 197
No_of_seqs 122 out of 2591
Neff 10.9
Searched_HMMs 29240
Date Tue Mar 26 00:21:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043188.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043188hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 4.5E-36 1.5E-40 205.4 10.8 146 26-196 5-150 (169)
2 2rfm_A Putative ankyrin repeat 100.0 1.2E-33 4.1E-38 197.3 11.4 152 20-196 30-181 (192)
3 3v31_A Ankyrin repeat family A 100.0 8.5E-33 2.9E-37 188.8 11.5 148 24-196 2-149 (167)
4 4b93_B Ankyrin repeat domain-c 100.0 4.6E-33 1.6E-37 204.0 9.9 150 20-194 81-230 (269)
5 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.4E-32 4.7E-37 188.2 10.9 152 20-196 9-160 (169)
6 1awc_B Protein (GA binding pro 100.0 1.8E-32 6.2E-37 184.7 10.2 146 25-196 2-147 (153)
7 3v30_A DNA-binding protein rfx 100.0 5.1E-32 1.7E-36 185.8 11.2 147 25-196 2-149 (172)
8 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.4E-32 8.3E-37 185.5 7.8 148 24-196 4-151 (162)
9 3hra_A Ankyrin repeat family p 100.0 2E-31 6.8E-36 187.0 12.4 153 20-196 34-192 (201)
10 1yyh_A HN1;, notch 1, ankyrin 100.0 2.3E-31 7.9E-36 193.3 12.9 170 21-196 53-237 (253)
11 1oy3_D Transcription factor in 100.0 1.2E-31 4E-36 197.1 11.0 168 21-195 5-238 (282)
12 2rfa_A Transient receptor pote 100.0 2.4E-31 8.1E-36 190.6 11.5 160 24-195 2-167 (232)
13 3utm_A Tankyrase-1; tankyrase, 100.0 3E-31 1E-35 200.4 12.5 170 20-196 53-294 (351)
14 1yyh_A HN1;, notch 1, ankyrin 100.0 2.4E-31 8.2E-36 193.2 10.8 160 30-196 28-204 (253)
15 2rfa_A Transient receptor pote 100.0 9E-31 3.1E-35 187.6 13.3 154 19-196 31-211 (232)
16 3aji_A 26S proteasome non-ATPa 100.0 4.9E-31 1.7E-35 188.8 11.6 168 20-194 35-217 (231)
17 3twr_A Tankyrase-2; ankyrin re 100.0 5.2E-32 1.8E-36 184.5 5.9 150 19-194 2-152 (165)
18 2f8y_A Notch homolog 1, transl 100.0 7E-31 2.4E-35 187.0 11.8 170 21-196 21-205 (223)
19 1sw6_A Regulatory protein SWI6 100.0 2.2E-31 7.5E-36 200.2 9.5 167 21-193 127-327 (327)
20 2etb_A Transient receptor pote 100.0 5.9E-31 2E-35 191.3 11.1 151 21-196 39-235 (256)
21 3b7b_A Euchromatic histone-lys 100.0 5.4E-31 1.8E-35 189.3 10.6 146 24-193 43-188 (237)
22 4gpm_A Engineered protein OR26 100.0 1.2E-30 4.2E-35 178.4 11.6 133 19-175 31-163 (169)
23 1bd8_A P19INK4D CDK4/6 inhibit 100.0 7.1E-31 2.4E-35 177.3 10.0 145 25-196 2-147 (156)
24 2xai_A ASB-9, ankyrin repeat a 100.0 9.3E-31 3.2E-35 190.9 11.0 148 22-196 33-180 (261)
25 3aji_A 26S proteasome non-ATPa 100.0 7.3E-31 2.5E-35 187.9 10.2 148 20-173 68-230 (231)
26 2f8y_A Notch homolog 1, transl 100.0 2.1E-30 7.3E-35 184.5 12.5 149 21-175 54-218 (223)
27 3d9h_A CDNA FLJ77766, highly s 100.0 2E-30 6.8E-35 191.5 12.2 171 17-196 51-236 (285)
28 1s70_B 130 kDa myosin-binding 100.0 2.2E-30 7.6E-35 192.0 12.5 169 21-196 36-246 (299)
29 4hbd_A KN motif and ankyrin re 100.0 1.4E-30 4.7E-35 191.6 11.1 154 20-196 106-264 (276)
30 1k1a_A B-cell lymphoma 3-encod 100.0 4.5E-30 1.5E-34 184.7 13.2 172 20-194 41-228 (241)
31 3f6q_A Integrin-linked protein 100.0 3.7E-31 1.3E-35 182.7 7.2 148 23-195 3-151 (179)
32 1ikn_D Protein (I-kappa-B-alph 100.0 2.4E-31 8.4E-36 191.1 6.0 156 20-196 40-198 (236)
33 2dzn_A Probable 26S proteasome 100.0 3.1E-30 1E-34 184.2 11.4 149 21-194 32-186 (228)
34 2pnn_A Transient receptor pote 100.0 4.5E-30 1.5E-34 188.3 12.1 152 21-196 50-247 (273)
35 3jxi_A Vanilloid receptor-rela 100.0 2.4E-30 8.3E-35 188.4 10.6 151 22-196 43-239 (260)
36 2xai_A ASB-9, ankyrin repeat a 100.0 7E-30 2.4E-34 186.3 11.7 144 25-194 3-146 (261)
37 4b93_B Ankyrin repeat domain-c 100.0 1.8E-30 6.3E-35 190.2 8.0 152 20-196 47-199 (269)
38 1k1a_A B-cell lymphoma 3-encod 100.0 2.9E-30 1E-34 185.7 8.7 145 22-172 76-240 (241)
39 3kea_A K1L; tropism, ANK repea 100.0 2.4E-30 8.3E-35 191.1 8.4 170 18-196 24-209 (285)
40 2dzn_A Probable 26S proteasome 100.0 1.8E-29 6.1E-34 180.3 12.5 147 25-196 2-154 (228)
41 2etb_A Transient receptor pote 100.0 3.4E-29 1.2E-33 182.0 14.0 157 24-192 1-182 (256)
42 3b7b_A Euchromatic histone-lys 100.0 1.2E-29 4E-34 182.3 11.3 150 20-194 72-222 (237)
43 3ljn_A Hypothetical protein; a 100.0 1.5E-29 5E-34 192.7 11.9 123 54-196 134-258 (364)
44 1n11_A Ankyrin; clathrin, BAND 100.0 1.8E-29 6.2E-34 196.4 12.0 165 24-195 211-390 (437)
45 4g8k_A 2-5A-dependent ribonucl 100.0 7.1E-30 2.4E-34 192.5 9.1 175 19-196 19-287 (337)
46 3eu9_A Huntingtin-interacting 100.0 2.9E-29 9.9E-34 180.1 11.0 170 20-196 37-224 (240)
47 3d9h_A CDNA FLJ77766, highly s 100.0 3.9E-29 1.3E-33 184.6 11.7 164 20-192 87-265 (285)
48 3hra_A Ankyrin repeat family p 100.0 8.5E-29 2.9E-33 173.6 12.5 147 23-194 3-152 (201)
49 1s70_B 130 kDa myosin-binding 100.0 2.5E-29 8.4E-34 186.4 10.1 148 20-192 68-275 (299)
50 1d9s_A Cyclin-dependent kinase 100.0 1.9E-29 6.5E-34 166.7 8.5 131 18-173 5-136 (136)
51 2pnn_A Transient receptor pote 100.0 8.1E-29 2.8E-33 181.6 12.7 169 19-194 7-196 (273)
52 1oy3_D Transcription factor in 100.0 2.8E-29 9.7E-34 184.4 10.2 173 20-195 40-271 (282)
53 2vge_A RELA-associated inhibit 100.0 6.4E-31 2.2E-35 188.3 1.2 152 21-196 17-202 (229)
54 3ljn_A Hypothetical protein; a 100.0 1.2E-29 4E-34 193.2 8.1 169 19-196 14-225 (364)
55 1ikn_D Protein (I-kappa-B-alph 100.0 2.1E-30 7.3E-35 186.2 3.4 158 20-196 3-165 (236)
56 1wdy_A 2-5A-dependent ribonucl 100.0 7.2E-29 2.5E-33 182.2 11.1 167 22-195 36-266 (285)
57 1ycs_B 53BP2, P53BP2; ankyrin 100.0 2.7E-29 9.3E-34 181.0 8.5 147 24-196 4-153 (239)
58 1n11_A Ankyrin; clathrin, BAND 100.0 8.1E-29 2.8E-33 192.7 11.3 170 20-196 9-193 (437)
59 1bi7_B P16INK4A, MTS1, multipl 100.0 1.8E-29 6E-34 170.6 6.6 145 20-190 7-152 (156)
60 2fo1_E LIN-12 protein; beta-ba 100.0 1.7E-28 5.8E-33 187.5 12.0 173 20-196 161-360 (373)
61 3v30_A DNA-binding protein rfx 100.0 9.5E-29 3.2E-33 169.4 9.3 141 20-185 31-171 (172)
62 3utm_A Tankyrase-1; tankyrase, 100.0 4.8E-28 1.7E-32 182.8 13.9 151 20-191 86-322 (351)
63 1wdy_A 2-5A-dependent ribonucl 100.0 1.5E-28 5.2E-33 180.5 10.6 148 24-196 4-162 (285)
64 1n0r_A 4ANK, 4 ankyrin repeats 100.0 1.1E-27 3.7E-32 155.7 11.4 126 24-173 1-126 (126)
65 2jab_A H10-2-G3; HER2, darpin, 100.0 5.1E-28 1.7E-32 159.8 9.8 127 21-171 10-136 (136)
66 3t8k_A Uncharacterized protein 99.9 5.2E-29 1.8E-33 172.9 4.1 144 25-195 6-167 (186)
67 3eu9_A Huntingtin-interacting 99.9 2.3E-27 7.8E-32 170.2 12.9 149 21-194 5-154 (240)
68 3jxi_A Vanilloid receptor-rela 99.9 1.6E-27 5.4E-32 173.5 11.3 153 23-194 3-188 (260)
69 2fo1_E LIN-12 protein; beta-ba 99.9 3.3E-28 1.1E-32 185.9 7.8 150 40-196 148-327 (373)
70 1ihb_A P18-INK4C(INK6), cyclin 99.9 3E-27 1E-31 160.3 9.8 129 20-173 33-162 (162)
71 2b0o_E UPLC1; arfgap, structur 99.9 1.5E-27 5.1E-32 177.3 8.1 140 25-195 151-299 (301)
72 4g8k_A 2-5A-dependent ribonucl 99.9 1E-26 3.5E-31 175.3 12.4 151 20-196 163-315 (337)
73 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.8E-26 6E-31 157.8 11.7 128 20-171 42-169 (169)
74 3f6q_A Integrin-linked protein 99.9 7.1E-27 2.4E-31 161.2 9.1 137 19-180 33-169 (179)
75 4hbd_A KN motif and ankyrin re 99.9 2.9E-27 9.9E-32 173.8 7.5 146 26-196 77-230 (276)
76 1d9s_A Cyclin-dependent kinase 99.9 1.8E-27 6.1E-32 157.2 5.5 121 50-196 4-125 (136)
77 3twr_A Tankyrase-2; ankyrin re 99.9 9.8E-27 3.3E-31 158.3 9.3 128 20-172 37-164 (165)
78 3c5r_A BARD-1, BRCA1-associate 99.9 3.6E-27 1.2E-31 155.8 6.5 116 53-193 5-120 (137)
79 2rfm_A Putative ankyrin repeat 99.9 3.3E-26 1.1E-30 159.5 11.5 128 20-171 63-190 (192)
80 3v31_A Ankyrin repeat family A 99.9 2.3E-26 7.8E-31 156.8 10.0 131 20-174 31-161 (167)
81 1awc_B Protein (GA binding pro 99.9 3.8E-26 1.3E-30 153.7 9.7 123 21-167 30-152 (153)
82 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.7E-27 5.8E-32 171.6 2.3 147 23-194 35-193 (239)
83 2jab_A H10-2-G3; HER2, darpin, 99.9 7E-26 2.4E-30 149.5 9.3 118 54-196 10-127 (136)
84 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.1E-25 3.8E-30 151.7 10.1 128 17-170 28-155 (156)
85 3kea_A K1L; tropism, ANK repea 99.9 1.3E-25 4.4E-30 165.8 10.9 149 24-180 61-226 (285)
86 1n0r_A 4ANK, 4 ankyrin repeats 99.9 6E-25 2.1E-29 142.6 11.5 115 57-196 1-115 (126)
87 3c5r_A BARD-1, BRCA1-associate 99.9 1.1E-26 3.9E-31 153.4 3.1 129 20-172 5-133 (137)
88 3aaa_C Myotrophin, protein V-1 99.9 1.2E-25 4.2E-30 145.8 7.3 112 56-192 5-116 (123)
89 2vge_A RELA-associated inhibit 99.9 9.7E-26 3.3E-30 161.4 5.9 130 41-195 1-136 (229)
90 3ehr_A Osteoclast-stimulating 99.9 4.2E-26 1.4E-30 162.4 4.0 135 22-180 70-204 (222)
91 3aaa_C Myotrophin, protein V-1 99.9 1.1E-25 3.7E-30 146.1 5.3 111 23-157 5-115 (123)
92 3lvq_E ARF-GAP with SH3 domain 99.9 6.3E-25 2.1E-29 173.5 10.7 136 26-190 133-275 (497)
93 3deo_A Signal recognition part 99.9 8.1E-26 2.8E-30 156.4 4.8 131 22-195 41-172 (183)
94 3ui2_A Signal recognition part 99.9 1.5E-25 5E-30 161.9 5.8 141 21-170 41-182 (244)
95 1bi7_B P16INK4A, MTS1, multipl 99.9 2.4E-25 8.2E-30 150.2 6.3 118 53-196 7-125 (156)
96 3deo_A Signal recognition part 99.9 1.9E-24 6.3E-29 149.6 9.5 115 55-195 41-156 (183)
97 1sw6_A Regulatory protein SWI6 99.9 5.8E-26 2E-30 170.7 0.5 144 28-196 100-297 (327)
98 3jue_A Arfgap with coiled-coil 99.9 3.8E-24 1.3E-28 162.6 9.3 145 24-193 198-348 (368)
99 3ehr_A Osteoclast-stimulating 99.9 1.6E-24 5.3E-29 154.3 6.7 118 53-195 68-186 (222)
100 3t8k_A Uncharacterized protein 99.9 2.5E-25 8.7E-30 154.3 1.8 126 23-172 36-178 (186)
101 1dcq_A PYK2-associated protein 99.9 1.5E-23 5.2E-28 154.1 10.9 127 25-175 130-265 (278)
102 3ui2_A Signal recognition part 99.9 1.6E-23 5.5E-28 151.2 9.4 141 25-194 15-156 (244)
103 1n0q_A 3ANK, 3 ankyrin repeats 99.9 9E-23 3.1E-27 125.8 10.3 93 57-173 1-93 (93)
104 2l6b_A NR1C; ankyrin, consensu 99.9 6.6E-23 2.3E-27 131.2 7.0 109 53-186 4-112 (115)
105 2aja_A Ankyrin repeat family p 99.9 1E-24 3.4E-29 166.3 -3.6 142 25-197 92-240 (376)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.9E-22 6.6E-27 124.3 6.7 93 24-122 1-93 (93)
107 3jue_A Arfgap with coiled-coil 99.9 1E-21 3.6E-26 149.2 8.9 118 54-196 195-315 (368)
108 1dcq_A PYK2-associated protein 99.8 5.7E-21 2E-25 140.3 10.4 113 59-196 131-252 (278)
109 2b0o_E UPLC1; arfgap, structur 99.8 5E-21 1.7E-25 142.2 9.3 114 58-196 151-273 (301)
110 3lvq_E ARF-GAP with SH3 domain 99.8 7E-21 2.4E-25 150.5 9.7 114 58-196 132-254 (497)
111 2l6b_A NR1C; ankyrin, consensu 99.8 5.4E-22 1.9E-26 126.9 2.6 100 20-125 4-103 (115)
112 2aja_A Ankyrin repeat family p 99.8 5.2E-22 1.8E-26 151.3 0.7 141 26-196 66-213 (376)
113 2zgd_A 3 repeat synthetic anky 99.8 2.9E-19 1E-23 113.3 6.8 89 55-167 21-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 7E-19 2.4E-23 111.6 8.6 91 20-116 19-109 (110)
115 1gp8_A Protein (scaffolding pr 81.5 0.96 3.3E-05 21.7 1.8 19 28-46 16-34 (40)
116 3mkq_B Coatomer subunit alpha; 50.8 26 0.00088 23.4 4.4 21 26-46 9-29 (177)
117 3zrh_A Ubiquitin thioesterase 26.0 29 0.00098 26.7 1.6 49 31-81 28-90 (454)
118 3zrh_A Ubiquitin thioesterase 24.1 2.5E+02 0.0086 21.7 6.4 24 146-169 67-90 (454)
119 3qil_A Clathrin heavy chain 1; 23.3 1.4E+02 0.0049 18.5 5.0 87 21-119 31-117 (125)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=4.5e-36 Score=205.41 Aligned_cols=146 Identities=25% Similarity=0.369 Sum_probs=138.7
Q ss_pred CHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHHHH
Q 043188 26 DPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHVAA 105 (197)
Q Consensus 26 ~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~a~ 105 (197)
...|+.|++.|+.++|+.|++.|.+++.+|..|.||||+|+ ..++.++++++++. +.+++.++..|.||||+|+
T Consensus 5 g~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~--~~~~~~~~~~ll~~----gad~~~~d~~g~TpLh~A~ 78 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAA--ENGHKEVVKLLISK----GADVNAKDSDGRTPLHHAA 78 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH--HcCCHHHHHHHHhc----ccchhhhccCCCCHHHHHH
Confidence 35799999999999999999999999999999999999999 99999999999885 8999999999999999999
Q ss_pred HhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCCcH
Q 043188 106 KFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKTP 185 (197)
Q Consensus 106 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~tp 185 (197)
..++.+++++|++.|++++. .|..|+||||+|+..|+.+++++|++.|++++ .+|..|+||
T Consensus 79 ~~g~~~~v~~Ll~~gadvn~------------------~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~G~Tp 139 (169)
T 4gpm_A 79 ENGHKEVVKLLISKGADVNA------------------KDSDGRTPLHHAAENGHKEVVKLLISKGADVN-TSDSDGRTP 139 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCH
T ss_pred HcCCHHHHHHHHHCcCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCH
Confidence 99999999999999999776 89999999999999999999999999999998 999999999
Q ss_pred HHHHHhcccCC
Q 043188 186 LYMAADYRSSN 196 (197)
Q Consensus 186 l~~A~~~~~~~ 196 (197)
|++|+..|+.+
T Consensus 140 L~~A~~~g~~~ 150 (169)
T 4gpm_A 140 LDLAREHGNEE 150 (169)
T ss_dssp HHHHHHTTCHH
T ss_pred HHHHHHcCCHH
Confidence 99999998754
No 2
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=1.2e-33 Score=197.26 Aligned_cols=152 Identities=18% Similarity=0.096 Sum_probs=143.9
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
..+..|.||||.|+..|+.+++++|++.|.+++..+..|.||||+|+ ..++.+++++|++. +.+++.++..|.|
T Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~~~~g~t 103 (192)
T 2rfm_A 30 YRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAV--KNNRLGIAEKLLSK----GSNVNTKDFSGKT 103 (192)
T ss_dssp CCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHH----TCCTTCCCTTSCC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHH--HcCCHHHHHHHHHC----CCCCCCCCCCCCc
Confidence 46778999999999999999999999999998888999999999999 99999999999997 8889999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccc
Q 043188 100 PLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSAN 179 (197)
Q Consensus 100 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (197)
|||+|+..++.+++++|++.|+++.. .+..|.||||+|+..++.+++++|++.|++++ .++
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~ 164 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLEHGANVND------------------RNLEGETPLIVASKYGRSEIVKKLLELGADIS-ARD 164 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSC------------------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CBC
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcC
Confidence 99999999999999999999998776 89999999999999999999999999999998 999
Q ss_pred cCCCcHHHHHHhcccCC
Q 043188 180 NYGKTPLYMAADYRSSN 196 (197)
Q Consensus 180 ~~g~tpl~~A~~~~~~~ 196 (197)
..|.||+++|+..|+.+
T Consensus 165 ~~g~t~l~~A~~~~~~~ 181 (192)
T 2rfm_A 165 LTGLTAEASARIFGRQE 181 (192)
T ss_dssp TTSCBHHHHHHHTTCHH
T ss_pred CCCCCHHHHHHHhCcHH
Confidence 99999999999998754
No 3
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=8.5e-33 Score=188.80 Aligned_cols=148 Identities=16% Similarity=0.113 Sum_probs=139.8
Q ss_pred cCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHH
Q 043188 24 QIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHV 103 (197)
Q Consensus 24 ~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~ 103 (197)
.+.||||.|+..|+.+.+++|++.+.+++.++..|.||||+|+ ..|+.+++++|++. +.+++.++..|.||||+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~ 75 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAA--AHGQIAVVEFLLQN----GADPQLLGKGRESALSL 75 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHT----TCCTTCCCTTCCCHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHH--HCCCHHHHHHHHHc----CCCCCCcCCCCCcHHHH
Confidence 4688999999999999999999999988889999999999999 99999999999986 88899999999999999
Q ss_pred HHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCC
Q 043188 104 AAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGK 183 (197)
Q Consensus 104 a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~ 183 (197)
|+..++.+++++|++.++++.. .+..|.||||+|+..++.+++++|++.|++++ .++..|.
T Consensus 76 A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~ 136 (167)
T 3v31_A 76 ACSKGYTDIVKMLLDCGVDVNE------------------YDWNGGTPLLYAVHGNHVKCVKMLLESGADPT-IETDSGY 136 (167)
T ss_dssp HHHHTCHHHHHHHHHHTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSC
T ss_pred HHHcCCHHHHHHHHHCCCCCCc------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCC
Confidence 9999999999999999998776 89999999999999999999999999999998 8999999
Q ss_pred cHHHHHHhcccCC
Q 043188 184 TPLYMAADYRSSN 196 (197)
Q Consensus 184 tpl~~A~~~~~~~ 196 (197)
||+++|+..|+.+
T Consensus 137 t~l~~A~~~~~~~ 149 (167)
T 3v31_A 137 NSMDLAVALGYRS 149 (167)
T ss_dssp CHHHHHHHHTCHH
T ss_pred CHHHHHHHcCcHH
Confidence 9999999998754
No 4
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.6e-33 Score=203.98 Aligned_cols=150 Identities=25% Similarity=0.254 Sum_probs=141.2
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||+|+|+ ..++.+++++|++. +.+++.++..|.|
T Consensus 81 ~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~--~~~~~~~~~~Ll~~----g~~~n~~d~~g~T 154 (269)
T 4b93_B 81 VTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLAC--QQGHFQVVKCLLDS----NAKPNKKDLSGNT 154 (269)
T ss_dssp CCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHH--HHTCHHHHHHHHHT----TCCSCCCCTTCCC
T ss_pred CcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCcccccc--ccChHHHHHHHHHC----CCCCCCCCCCCCC
Confidence 45678999999999999999999999999999988999999999999 99999999999885 8899999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccc
Q 043188 100 PLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSAN 179 (197)
Q Consensus 100 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (197)
|||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++.|++++ .+|
T Consensus 155 pL~~A~~~g~~~~v~~Ll~~gadvn~------------------~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~-~~d 215 (269)
T 4b93_B 155 PLIYACSGGHHELVALLLQHGASINA------------------SNNKGNTALHEAVIEKHVFVVELLLLHGASVQ-VLN 215 (269)
T ss_dssp HHHHHHHTTCGGGHHHHHHTTCCTTC------------------BCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSC-CCC
T ss_pred HHHHHHHCCCHHHHHHHHHCCCCCCc------------------cccCCCcHHHHHHHcCCHHHHHHHHHCCCCCC-CcC
Confidence 99999999999999999999999776 89999999999999999999999999999998 999
Q ss_pred cCCCcHHHHHHhccc
Q 043188 180 NYGKTPLYMAADYRS 194 (197)
Q Consensus 180 ~~g~tpl~~A~~~~~ 194 (197)
..|+||||+|++++.
T Consensus 216 ~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 216 KRQRTAVDCAEQNSK 230 (269)
T ss_dssp TTSCCSGGGSCTTCH
T ss_pred CCCCCHHHHHHhCCc
Confidence 999999999987664
No 5
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=1.4e-32 Score=188.24 Aligned_cols=152 Identities=24% Similarity=0.312 Sum_probs=140.1
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
...+.+.++|++|+..|+.+++++|++.|.+++..+..|.||||+|+ ..|+.+++++|++. +.+++.++..|.|
T Consensus 9 ~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~~~~g~t 82 (169)
T 2y1l_E 9 HHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAA--FNGHLEIVEVLLKN----GADVNAVDHAGMT 82 (169)
T ss_dssp ----CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHT----TCCTTCCCTTSCC
T ss_pred cCCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHHc----CCCCCccCCCCCC
Confidence 34556678999999999999999999999999989999999999999 99999999999986 8889999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccc
Q 043188 100 PLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSAN 179 (197)
Q Consensus 100 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (197)
|||+|+..++.+++++|++.++++.. .+..|.||||+|+..++.+++++|++.|++++ .+|
T Consensus 83 ~L~~A~~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~ 143 (169)
T 2y1l_E 83 PLRLAALFGHLEIVEVLLKNGADVNA------------------NDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN-AQD 143 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcC
Confidence 99999999999999999999998776 88999999999999999999999999999998 899
Q ss_pred cCCCcHHHHHHhcccCC
Q 043188 180 NYGKTPLYMAADYRSSN 196 (197)
Q Consensus 180 ~~g~tpl~~A~~~~~~~ 196 (197)
..|.||+++|+..|+.+
T Consensus 144 ~~g~t~l~~A~~~~~~~ 160 (169)
T 2y1l_E 144 KFGKTAFDISIDNGNED 160 (169)
T ss_dssp TTSCCHHHHHHHTTCHH
T ss_pred CCCCCHHHHHHHhCCHH
Confidence 99999999999998754
No 6
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.98 E-value=1.8e-32 Score=184.69 Aligned_cols=146 Identities=27% Similarity=0.276 Sum_probs=136.0
Q ss_pred CCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHHH
Q 043188 25 IDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHVA 104 (197)
Q Consensus 25 ~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~a 104 (197)
..++|+.|+..|+.+.+++|++.|.+++ .+..|.||||+|+ ..|+.+++++|++. +.+++.++..|.||||+|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A 74 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAA--QYGHFSTTEVLLRA----GVSRDARTKVDRTPLHMA 74 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHH--HHTCHHHHHHHHTT----TCCTTCCCTTCCCHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHH--HcCCHHHHHHHHHc----CCCCCCCCCCCCCHHHHH
Confidence 4578999999999999999999998654 5778999999999 99999999999885 888999999999999999
Q ss_pred HHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCCc
Q 043188 105 AKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKT 184 (197)
Q Consensus 105 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 184 (197)
+..++.+++++|++.|+++.. .+..|.||||+|+..++.+++++|++.|++++ .++..|.|
T Consensus 75 ~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t 135 (153)
T 1awc_B 75 ASEGHANIVEVLLKHGADVNA------------------KDMLKMTALHWATEHNHQEVVELLIKYGADVH-TQSKFCKT 135 (153)
T ss_dssp HHHTCHHHHHHHHTTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCC
T ss_pred HHcChHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCC
Confidence 999999999999999998776 89999999999999999999999999999998 89999999
Q ss_pred HHHHHHhcccCC
Q 043188 185 PLYMAADYRSSN 196 (197)
Q Consensus 185 pl~~A~~~~~~~ 196 (197)
|+++|+..|+.+
T Consensus 136 ~l~~A~~~~~~~ 147 (153)
T 1awc_B 136 AFDISIDNGNED 147 (153)
T ss_dssp HHHHHHHTTCHH
T ss_pred HHHHHHHcCCHH
Confidence 999999998754
No 7
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=5.1e-32 Score=185.78 Aligned_cols=147 Identities=22% Similarity=0.179 Sum_probs=136.2
Q ss_pred CCHHHHHHHHcCCcHHHHHHHHHHHH-HhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHH
Q 043188 25 IDPNLFKAAAAGNLEPFKDMAREVIE-RLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHV 103 (197)
Q Consensus 25 ~~~~l~~a~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~ 103 (197)
+.++|+.|+..|+.+.++.|++.+.+ ++..+..|.||||+|+ ..|+.+++++|++. +.+++.++..|.||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~ 75 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWAS--AFGEIETVRFLLEW----GADPHILAKERESALSL 75 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHH--HTTCHHHHHHHHHH----TCCTTCCCTTCCCHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHH--HcCCHHHHHHHHHc----CCCchhhcccCCCHHHH
Confidence 45789999999999999999999876 5678889999999999 99999999999997 88899999999999999
Q ss_pred HHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCC
Q 043188 104 AAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGK 183 (197)
Q Consensus 104 a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~ 183 (197)
|+..++.+++++|++.+.++.. .+..|.||||+|+..++.+++++|++.|++++ .++..|.
T Consensus 76 A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~ 136 (172)
T 3v30_A 76 ASTGGYTDIVGLLLERDVDINI------------------YDWNGGTPLLYAVRGNHVKCVEALLARGADLT-TEADSGY 136 (172)
T ss_dssp HHHTTCHHHHHHHHTTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSC
T ss_pred HHHCCCHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCC
Confidence 9999999999999999998776 88999999999999999999999999999998 8999999
Q ss_pred cHHHHHHhcccCC
Q 043188 184 TPLYMAADYRSSN 196 (197)
Q Consensus 184 tpl~~A~~~~~~~ 196 (197)
|||++|+..|+.+
T Consensus 137 t~l~~A~~~~~~~ 149 (172)
T 3v30_A 137 TPMDLAVALGYRK 149 (172)
T ss_dssp CHHHHHHHHTCHH
T ss_pred CHHHHHHHhCcHH
Confidence 9999999998754
No 8
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=2.4e-32 Score=185.55 Aligned_cols=148 Identities=22% Similarity=0.175 Sum_probs=137.5
Q ss_pred cCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHH
Q 043188 24 QIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHV 103 (197)
Q Consensus 24 ~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~ 103 (197)
...++|+.|+..|+.+.+++|++.|.+++..+..|.||||+|+ . ++.+++++|++. +.+++.++..|.||||+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~--~-~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~ 76 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK--L-GNPEIARRLLLR----GANPDLKDRTGFAVIHD 76 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCC--S-SCHHHHHHHHHT----TCCTTCCCTTSCCHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHH--c-CcHHHHHHHHHc----CCCCCCCCCCCCCHHHH
Confidence 4568999999999999999999999999889999999999999 8 999999999986 88899999999999999
Q ss_pred HHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCC
Q 043188 104 AAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGK 183 (197)
Q Consensus 104 a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~ 183 (197)
|+..++.+++++|++.+.+++. .+..|.||||+|+..++.+++++|++.|++..+.++..|.
T Consensus 77 A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~ 138 (162)
T 1ihb_A 77 AARAGFLDTLQTLLEFQADVNI------------------EDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGD 138 (162)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSC
T ss_pred HHHcCCHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCC
Confidence 9999999999999999998776 8999999999999999999999999999986448999999
Q ss_pred cHHHHHHhcccCC
Q 043188 184 TPLYMAADYRSSN 196 (197)
Q Consensus 184 tpl~~A~~~~~~~ 196 (197)
|||++|+..|+.+
T Consensus 139 t~l~~A~~~~~~~ 151 (162)
T 1ihb_A 139 TACDLARLYGRNE 151 (162)
T ss_dssp CHHHHHHHTTCHH
T ss_pred cHHHHHHHcCCHH
Confidence 9999999998754
No 9
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=2e-31 Score=187.02 Aligned_cols=153 Identities=22% Similarity=0.185 Sum_probs=140.6
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
..+..+.||||.|+..|+.+++++|++.|.+++..+..|.||||+|+ ..++.+++++|++. .+.+++.++..|.|
T Consensus 34 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~--~~~~~~~~~~Ll~~---~~~~~~~~~~~g~t 108 (201)
T 3hra_A 34 EVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAG--AQGRTEILAYMLKH---ATPDLNKHNRYGGN 108 (201)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHH---SCCCTTCCCTTSCC
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHhc---cCcccccccCCCCc
Confidence 45668899999999999999999999999999989999999999999 99999999999864 57788899999999
Q ss_pred HHHHHHHhCCHHHHHHHHHcC-CCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCC-----HHHHHHHhhcCCC
Q 043188 100 PLHVAAKFGHSDIVRVLVERA-KLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQN-----VDVVELLTKEDPD 173 (197)
Q Consensus 100 ~l~~a~~~~~~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~-----~~~~~~Ll~~g~~ 173 (197)
|||+|+..++.+++++|++.+ .++.. .+..|.||||+|+..++ .+++++|++.|++
T Consensus 109 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~------------------~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~ 170 (201)
T 3hra_A 109 ALIPAAEKGHIDNVKLLLEDGREDIDF------------------QNDFGYTALIEAVGLREGNQLYQDIVKLLMENGAD 170 (201)
T ss_dssp SHHHHHHTTCHHHHHHHHHHCCCCTTC------------------CCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcCC------------------CCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCC
Confidence 999999999999999999998 66655 89999999999999988 9999999999999
Q ss_pred cccccccCCCcHHHHHHhcccCC
Q 043188 174 YQYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 174 ~~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
++ .++..|.|||++|+..|+.+
T Consensus 171 ~~-~~~~~g~t~l~~A~~~~~~~ 192 (201)
T 3hra_A 171 QS-IKDNSGRTAMDYANQKGYTE 192 (201)
T ss_dssp TT-CCCTTSCCHHHHHHHHTCHH
T ss_pred CC-ccCCCCCCHHHHHHHcCCHh
Confidence 98 99999999999999998754
No 10
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=2.3e-31 Score=193.27 Aligned_cols=170 Identities=15% Similarity=0.129 Sum_probs=144.2
Q ss_pred ccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcH
Q 043188 21 SQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTP 100 (197)
Q Consensus 21 ~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~ 100 (197)
.+..|.||||+|+..|+.+++++|++.|.+++..+..|.||||+|+ ..++.+++++|++. ...+++.++..|.||
T Consensus 53 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~---~~~~~~~~~~~g~t~ 127 (253)
T 1yyh_A 53 TDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAV--SADAQGVFQILIRN---RATDLDARMHDGTTP 127 (253)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HHTCHHHHHHHHHS---TTSCTTCCCTTCCCH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHHc---CCCCccccCCCCCcH
Confidence 3678899999999999999999999999988888889999999999 99999999998874 233778888889999
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHH---------------HHHhhccCCCCchHHHHHHhcCCHHHHH
Q 043188 101 LHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAA---------------RQMIRMTNNEKNTALHEAVCHQNVDVVE 165 (197)
Q Consensus 101 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 165 (197)
||+|+..++.+++++|++.|++++..+..+.+++..+ +.+++..+..|.||||+|+..++.++++
T Consensus 128 L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~ 207 (253)
T 1yyh_A 128 LILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAK 207 (253)
T ss_dssp HHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHH
Confidence 9999999999999999999888877665444444322 3345678889999999999999999999
Q ss_pred HHhhcCCCcccccccCCCcHHHHHHhcccCC
Q 043188 166 LLTKEDPDYQYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 166 ~Ll~~g~~~~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
+|++.|++++ .+|..|.||+++|+..|+.+
T Consensus 208 ~Ll~~ga~~~-~~d~~g~tpl~~A~~~g~~~ 237 (253)
T 1yyh_A 208 VLLDHFANRD-ITDHMDRLPRDIAQERMHHD 237 (253)
T ss_dssp HHHHTTCCTT-CCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHcCCCcc-ccccCCCCHHHHHHHcCCHH
Confidence 9999999988 89999999999999998765
No 11
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=1.2e-31 Score=197.11 Aligned_cols=168 Identities=21% Similarity=0.125 Sum_probs=120.8
Q ss_pred ccccCCHHHHHHHHcCCcHHHHHHHHHHHH---HhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCC
Q 043188 21 SQSQIDPNLFKAAAAGNLEPFKDMAREVIE---RLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKG 97 (197)
Q Consensus 21 ~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 97 (197)
.++.|.||||.|+..|+.++|++|++.|.+ ++.++..|.||||+|+ ..|+.+++++|++. +++++.++..|
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~----ga~~~~~~~~g 78 (282)
T 1oy3_D 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAA--ILGEASTVEKLYAA----GAGVLVAERGG 78 (282)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHH--HHTCHHHHHHHHHT----TCCSSCCCTTS
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHH--HcCCHHHHHHHHHc----CCCCCCCCCCC
Confidence 456788889999999999999999988887 6677888899999999 88888888888885 78888888888
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCCCcc-----------------------------------------------chhhH
Q 043188 98 DTPLHVAAKFGHSDIVRVLVERAKLPQH-----------------------------------------------ENEEL 130 (197)
Q Consensus 98 ~t~l~~a~~~~~~~~~~~ll~~~~~~~~-----------------------------------------------~~~~~ 130 (197)
.||||+|+..++.+++++|++.++.... ....+
T Consensus 79 ~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 158 (282)
T 1oy3_D 79 HTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDG 158 (282)
T ss_dssp CCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTS
T ss_pred CCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCC
Confidence 8888888888888888888887655221 11111
Q ss_pred HhhHH---------------HHHHHhhccCC-CCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCCcHHHHHHhccc
Q 043188 131 ESRVG---------------AARQMIRMTNN-EKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKTPLYMAADYRS 194 (197)
Q Consensus 131 ~~~~~---------------~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~tpl~~A~~~~~ 194 (197)
..++. ..+..++..+. .|.||||+|+..++.+++++|++.|++++ .++..|.||||+|+..|+
T Consensus 159 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~-~~d~~g~tpL~~A~~~~~ 237 (282)
T 1oy3_D 159 HTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPT-ARMYGGRTPLGSALLRPN 237 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHTSSC
T ss_pred cCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc-ccccCCCCHHHHHHHcCC
Confidence 11111 11222333443 37777777777777777777777777766 677777777777776665
Q ss_pred C
Q 043188 195 S 195 (197)
Q Consensus 195 ~ 195 (197)
.
T Consensus 238 ~ 238 (282)
T 1oy3_D 238 P 238 (282)
T ss_dssp H
T ss_pred c
Confidence 4
No 12
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=2.4e-31 Score=190.61 Aligned_cols=160 Identities=18% Similarity=0.155 Sum_probs=137.0
Q ss_pred cCCHHHHHHHHcCCcHHHHHHHHH-HHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCccc-----ccCCCCC
Q 043188 24 QIDPNLFKAAAAGNLEPFKDMARE-VIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLL-----LQVNAKG 97 (197)
Q Consensus 24 ~~~~~l~~a~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~-----~~~~~~~ 97 (197)
.|.||||.|+..|+.+.++.|++. |.+++.++..|.||||+|+ ..|+.+++++|++. +.++ +.++..|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~----~~~~~~~~~~~~~~~g 75 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAA--LYDNLEAAMVLMEA----APELVFEPMTSELYEG 75 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHH----CGGGGGCCCCSTTTTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHH--HcCCHHHHHHHHHc----CchhccccccccCCCC
Confidence 478899999999999999999997 8888889999999999999 99999999999997 5554 5667789
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccc
Q 043188 98 DTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYS 177 (197)
Q Consensus 98 ~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~ 177 (197)
.||||+|+..++.+++++|++.|+++......... ....+..+..|.||||+|+..|+.+++++|++.|++++ .
T Consensus 76 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~-----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~ 149 (232)
T 2rfa_A 76 QTALHIAVINQNVNLVRALLARGASVSARATGSVF-----HYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR-A 149 (232)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGG-----SCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT-C
T ss_pred cCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcce-----eecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-C
Confidence 99999999999999999999999987762211000 00112234589999999999999999999999999998 9
Q ss_pred cccCCCcHHHHHHhcccC
Q 043188 178 ANNYGKTPLYMAADYRSS 195 (197)
Q Consensus 178 ~~~~g~tpl~~A~~~~~~ 195 (197)
+|..|.||||+|+..|+.
T Consensus 150 ~d~~g~t~L~~A~~~~~~ 167 (232)
T 2rfa_A 150 QDSLGNTVLHILILQPNK 167 (232)
T ss_dssp CCTTSCCHHHHHHTCSCH
T ss_pred CCCCCCCHHHHHHHcCCh
Confidence 999999999999998874
No 13
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=3e-31 Score=200.37 Aligned_cols=170 Identities=19% Similarity=0.118 Sum_probs=148.0
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||||+|+ ..|+.+++++|++. +.+++.++..|.|
T Consensus 53 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~g~~~iv~~Ll~~----g~~~~~~~~~g~t 126 (351)
T 3utm_A 53 ASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNAC--SYGHYEVTELLLKH----GACVNAMDLWQFT 126 (351)
T ss_dssp CSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH--HTTCHHHHHHHHHT----TCCTTCCCTTCCC
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHH--HCCCHHHHHHHHHC----CCCCCCCCCCCCC
Confidence 46678999999999999999999999999999999999999999999 99999999999986 8889999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCccchhhH-------------------------------------------------
Q 043188 100 PLHVAAKFGHSDIVRVLVERAKLPQHENEEL------------------------------------------------- 130 (197)
Q Consensus 100 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~------------------------------------------------- 130 (197)
|||+|+..++.+++++|++.|+++...+...
T Consensus 127 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 206 (351)
T 3utm_A 127 PLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFK 206 (351)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhccccc
Confidence 9999999999999999999998866432111
Q ss_pred -----------------------HhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCCcHHH
Q 043188 131 -----------------------ESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKTPLY 187 (197)
Q Consensus 131 -----------------------~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~tpl~ 187 (197)
...+...+.+++..+..|.||||+|+..|+.+++++|++.|++++ .+|..|.||||
T Consensus 207 ~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n-~~d~~g~t~L~ 285 (351)
T 3utm_A 207 QPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMN-ALDSLGQTALH 285 (351)
T ss_dssp CTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHH
T ss_pred CCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHH
Confidence 001111223456788899999999999999999999999999998 99999999999
Q ss_pred HHHhcccCC
Q 043188 188 MAADYRSSN 196 (197)
Q Consensus 188 ~A~~~~~~~ 196 (197)
+|+..|+.+
T Consensus 286 ~A~~~~~~~ 294 (351)
T 3utm_A 286 RAALAGHLQ 294 (351)
T ss_dssp HHHHHTCHH
T ss_pred HHHHcCcHH
Confidence 999988754
No 14
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=2.4e-31 Score=193.18 Aligned_cols=160 Identities=20% Similarity=0.197 Sum_probs=118.4
Q ss_pred HHHHHcCCcHHHHHHHHHHHHHh-cccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHHHHHhC
Q 043188 30 FKAAAAGNLEPFKDMAREVIERL-LTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHVAAKFG 108 (197)
Q Consensus 30 ~~a~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~a~~~~ 108 (197)
..+...++.++++.|++.|.+++ ..+..|.||||+|+ ..|+.+++++|++. +.+++.++..|.||||+|+..+
T Consensus 28 ~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~--~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~~~ 101 (253)
T 1yyh_A 28 NSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAA--RYSRSDAAKRLLEA----SADANIQDNMGRTPLHAAVSAD 101 (253)
T ss_dssp ------------------------CCCTTSCCHHHHHH--HTTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHHHHT
T ss_pred chhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHH--HcCCHHHHHHHHHc----CCCCCCCCCCCCCHHHHHHHcC
Confidence 44788899999999999999987 46889999999999 99999999999986 8889999999999999999999
Q ss_pred CHHHHHHHHHcCC-CCccchhhHHhhHHH---------------HHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCC
Q 043188 109 HSDIVRVLVERAK-LPQHENEELESRVGA---------------ARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDP 172 (197)
Q Consensus 109 ~~~~~~~ll~~~~-~~~~~~~~~~~~~~~---------------~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~ 172 (197)
+.+++++|++.+. .+......+..++.. .+.+++..+..|.||||+|+..++.+++++|++.|+
T Consensus 102 ~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga 181 (253)
T 1yyh_A 102 AQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA 181 (253)
T ss_dssp CHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 9999999999987 555554444333332 234467788899999999999999999999999999
Q ss_pred CcccccccCCCcHHHHHHhcccCC
Q 043188 173 DYQYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 173 ~~~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
+++ .++..|.||||+|+..|+.+
T Consensus 182 ~~~-~~~~~g~tpL~~A~~~~~~~ 204 (253)
T 1yyh_A 182 NKD-MQNNREETPLFLAAREGSYE 204 (253)
T ss_dssp CTT-CCCTTSCCHHHHHHHHTCHH
T ss_pred CCC-CcCCCCCCHHHHHHHCCCHH
Confidence 998 89999999999999988754
No 15
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=9e-31 Score=187.59 Aligned_cols=154 Identities=23% Similarity=0.204 Sum_probs=139.0
Q ss_pred ccccccCCHHHHHHHHcCCcHHHHHHHHHHHHH-----hcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccC
Q 043188 19 EISQSQIDPNLFKAAAAGNLEPFKDMAREVIER-----LLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQV 93 (197)
Q Consensus 19 ~~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~-----~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 93 (197)
...+..|.||||.|+..|+.+++++|++.|.++ +..+..|.||||+|+ ..|+.+++++|++. +.+++.+
T Consensus 31 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~ 104 (232)
T 2rfa_A 31 HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAV--INQNVNLVRALLAR----GASVSAR 104 (232)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHH--HTTCHHHHHHHHHT----TCCTTCC
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHH--HcCCHHHHHHHHhC----CCCCCcc
Confidence 346778999999999999999999999999887 456778999999999 99999999999986 7777776
Q ss_pred CC-------------CCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCC
Q 043188 94 NA-------------KGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQN 160 (197)
Q Consensus 94 ~~-------------~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~ 160 (197)
+. .|.||||+|+..++.+++++|++.|++++. .|..|.||||+|+..++
T Consensus 105 ~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------------------~d~~g~t~L~~A~~~~~ 166 (232)
T 2rfa_A 105 ATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRA------------------QDSLGNTVLHILILQPN 166 (232)
T ss_dssp CCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHTCSC
T ss_pred cCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------------------CCCCCCCHHHHHHHcCC
Confidence 55 799999999999999999999999999776 89999999999999999
Q ss_pred HHHH----HHHhhcCCCcc-----cccccCCCcHHHHHHhcccCC
Q 043188 161 VDVV----ELLTKEDPDYQ-----YSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 161 ~~~~----~~Ll~~g~~~~-----~~~~~~g~tpl~~A~~~~~~~ 196 (197)
.+++ ++|++.|++.. +.+|..|.|||++|+..|+.+
T Consensus 167 ~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~ 211 (232)
T 2rfa_A 167 KTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIV 211 (232)
T ss_dssp HHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHH
T ss_pred hHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHH
Confidence 9988 99999999873 488999999999999998754
No 16
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=4.9e-31 Score=188.79 Aligned_cols=168 Identities=22% Similarity=0.202 Sum_probs=137.7
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
..+..+.||||.|+..|+.+++++|++.|.+++..+..|.||||+|+ ..++.+++++|++. +.+++.++..|.|
T Consensus 35 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~~~~g~t 108 (231)
T 3aji_A 35 RTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAA--SAGXDEIVKALLVK----GAHVNAVNQNGCT 108 (231)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHH--HHTCHHHHHHHHHT----TCCTTCCCTTSCC
T ss_pred cCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHH--HcCHHHHHHHHHHc----CCCCCCCCCCCCC
Confidence 35667889999999999999999999999888888889999999999 99999999998885 7888888889999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHH---------------HHHhhccCCCCchHHHHHHhcCCHHHH
Q 043188 100 PLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAA---------------RQMIRMTNNEKNTALHEAVCHQNVDVV 164 (197)
Q Consensus 100 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~a~~~~~~~~~ 164 (197)
|||+|+..++.+++++|++.+.++...+..+..++..+ +.+++..+..|.||||+|+..++.+++
T Consensus 109 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 188 (231)
T 3aji_A 109 PLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEA 188 (231)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHH
Confidence 99999999999999999999888776554433333221 233456677888888888888888888
Q ss_pred HHHhhcCCCcccccccCCCcHHHHHHhccc
Q 043188 165 ELLTKEDPDYQYSANNYGKTPLYMAADYRS 194 (197)
Q Consensus 165 ~~Ll~~g~~~~~~~~~~g~tpl~~A~~~~~ 194 (197)
++|++.|++++ .++..|.||+++|+..++
T Consensus 189 ~~Ll~~ga~~~-~~~~~g~t~l~~A~~~~~ 217 (231)
T 3aji_A 189 KFLVTQGASIY-IENKEEKTPLQVAKGGLG 217 (231)
T ss_dssp HHHHHTTCCSC-CCCTTSCCHHHHSCHHHH
T ss_pred HHHHHCCCCCC-CCCCCCCCHHHHHHhhHH
Confidence 88888888887 888888888888876654
No 17
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=5.2e-32 Score=184.55 Aligned_cols=150 Identities=24% Similarity=0.343 Sum_probs=134.5
Q ss_pred ccccccCCHHHHHHHHcCCcHHHHHHHHHH-HHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCC
Q 043188 19 EISQSQIDPNLFKAAAAGNLEPFKDMAREV-IERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKG 97 (197)
Q Consensus 19 ~~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 97 (197)
...++.+.++|+.|+..|+.+.++.|++.+ .+....+..|.||||+|+ ..++.+++++|++. +.+++.++..|
T Consensus 2 ~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~~~~g 75 (165)
T 3twr_A 2 AMGNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAA--GYNRVSVVEYLLQH----GADVHAKDKGG 75 (165)
T ss_dssp ----CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHH--HTTCHHHHHHHHHT----TCCTTCCCTTS
T ss_pred CCCcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHH--HcChHHHHHHHHhc----CCCCCccCCCC
Confidence 356778899999999999999999999854 444467778899999999 99999999999986 88899999999
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccc
Q 043188 98 DTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYS 177 (197)
Q Consensus 98 ~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~ 177 (197)
.||||+|+..++.+++++|++.++++.. .+..|.||||+|+..++.+++++|++.|++++ .
T Consensus 76 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~ 136 (165)
T 3twr_A 76 LVPLHNACSYGHYEVAELLVKHGAVVNV------------------ADLWKFTPLHEAAAKGKYEICKLLLQHGADPT-K 136 (165)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-C
T ss_pred CCHHHHHHHcCcHHHHHHHHhCCCCCCC------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-c
Confidence 9999999999999999999999998776 88999999999999999999999999999998 9
Q ss_pred cccCCCcHHHHHHhccc
Q 043188 178 ANNYGKTPLYMAADYRS 194 (197)
Q Consensus 178 ~~~~g~tpl~~A~~~~~ 194 (197)
+|..|.||+++|.. ++
T Consensus 137 ~~~~g~t~l~~a~~-~~ 152 (165)
T 3twr_A 137 KNRDGNTPLDLVKD-GD 152 (165)
T ss_dssp CCTTSCCTGGGSCT-TC
T ss_pred cCCCCCChhHhHhc-CC
Confidence 99999999999876 44
No 18
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=7e-31 Score=187.03 Aligned_cols=170 Identities=15% Similarity=0.129 Sum_probs=141.7
Q ss_pred ccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcH
Q 043188 21 SQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTP 100 (197)
Q Consensus 21 ~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~ 100 (197)
.+..+.||||.|+..|+.+++++|++.|.+++..+..|.||||+|+ ..++.+++++|++. .+..++.++..|.||
T Consensus 21 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~---~~~~~~~~~~~g~t~ 95 (223)
T 2f8y_A 21 TDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAV--SADAQGVFQILIRN---RATDLDARMHDGTTP 95 (223)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHB---TTSCTTCCCTTCCCH
T ss_pred cCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH--HcCCHHHHHHHHHc---CCCCcccCCCCCCcH
Confidence 3567899999999999999999999999988888899999999999 99999999999884 334778888899999
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHH---------------HHHhhccCCCCchHHHHHHhcCCHHHHH
Q 043188 101 LHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAA---------------RQMIRMTNNEKNTALHEAVCHQNVDVVE 165 (197)
Q Consensus 101 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 165 (197)
||+|+..++.+++++|++.++++...+..+.+++..+ +.+++..+..|.||||+|+..++.++++
T Consensus 96 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 175 (223)
T 2f8y_A 96 LILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAK 175 (223)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHH
Confidence 9999999999999999999988877655444333322 2345667788889999998888899999
Q ss_pred HHhhcCCCcccccccCCCcHHHHHHhcccCC
Q 043188 166 LLTKEDPDYQYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 166 ~Ll~~g~~~~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
+|++.|++++ .++..|.||+++|+..++.+
T Consensus 176 ~Ll~~ga~~~-~~~~~g~t~l~~A~~~~~~~ 205 (223)
T 2f8y_A 176 VLLDHFANRD-ITDHMDRLPRDIAQERMHHD 205 (223)
T ss_dssp HHHHTTCCTT-CCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHcCCCCc-cccccCCCHHHHHHHhcchH
Confidence 9998888887 88888889999988887654
No 19
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=2.2e-31 Score=200.23 Aligned_cols=167 Identities=19% Similarity=0.205 Sum_probs=138.0
Q ss_pred ccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcc---cccHHHHHHHHHhCCcccccCCCCC
Q 043188 21 SQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERE---NVSTKFVAEILEKCPSLLLQVNAKG 97 (197)
Q Consensus 21 ~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~---~~~~~~l~~~l~~~~~~~~~~~~~~ 97 (197)
.+..|.||||+|+..|+.++|++|+++|.+++.++..|.||||+|+ ..|+ .++++.|++.+ ..+++.++..|
T Consensus 127 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~--~~g~~~~~~~~~~ll~~~---~~~~~~~d~~g 201 (327)
T 1sw6_A 127 VDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAV--KSVNNYDSGTFEALLDYL---YPCLILEDSMN 201 (327)
T ss_dssp CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHH--HSSHHHHTTCHHHHHHHH---GGGGGEECTTC
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH--HhcccccHHHHHHHHHhh---hccccCCCCCC
Confidence 5778999999999999999999999999999999999999999999 9888 78888888873 35688899999
Q ss_pred CcHHHHHHH----hCCHHHHHHHHHc--------------------CCCCccchhhHHhhHHHH-------HHHhhccCC
Q 043188 98 DTPLHVAAK----FGHSDIVRVLVER--------------------AKLPQHENEELESRVGAA-------RQMIRMTNN 146 (197)
Q Consensus 98 ~t~l~~a~~----~~~~~~~~~ll~~--------------------~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 146 (197)
.||||+|+. .++.+++++|++. +.++......+..++... ...++..+.
T Consensus 202 ~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~ 281 (327)
T 1sw6_A 202 RTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDS 281 (327)
T ss_dssp CCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCT
T ss_pred CCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCC
Confidence 999999999 8999999999987 556555555544444322 225888999
Q ss_pred CCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCCcHHHHHHhcc
Q 043188 147 EKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKTPLYMAADYR 193 (197)
Q Consensus 147 ~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~tpl~~A~~~~ 193 (197)
.|+||||+|+..|+.+++++|++.|++++ .+|..|+||||+|+..|
T Consensus 282 ~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~-~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 282 NGDTCLNIAARLGNISIVDALLDYGADPF-IANKSGLRPVDFGAGLE 327 (327)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHHTTCCTT-CCCTTSCCGGGGTCC--
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHhcC
Confidence 99999999999999999999999999998 99999999999998765
No 20
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=5.9e-31 Score=191.30 Aligned_cols=151 Identities=23% Similarity=0.205 Sum_probs=138.1
Q ss_pred ccccCCHHHHHHHHc---CCcHHHHHHHHHHHHHhc-----------ccccCCcHHHHHHHhhhcccccHHHHHHHHHhC
Q 043188 21 SQSQIDPNLFKAAAA---GNLEPFKDMAREVIERLL-----------TAKTKNTILHINIISQERENVSTKFVAEILEKC 86 (197)
Q Consensus 21 ~~~~~~~~l~~a~~~---g~~~~v~~Ll~~g~~~~~-----------~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~ 86 (197)
.+..|.||||.|+.. |+.+++++|++.|.+++. .+..|.||||+|+ ..|+.+++++|++.
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~--~~g~~~~v~~Ll~~---- 112 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAI--EKRSLQCVKLLVEN---- 112 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHH--HTTCHHHHHHHHHT----
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHH--HcCCHHHHHHHHHc----
Confidence 577899999999999 999999999999998762 2367999999999 99999999999986
Q ss_pred CcccccCCCC-------------CCcHHHHHHHhCCHHHHHHHHH---cCCCCccchhhHHhhHHHHHHHhhccCCCCch
Q 043188 87 PSLLLQVNAK-------------GDTPLHVAAKFGHSDIVRVLVE---RAKLPQHENEELESRVGAARQMIRMTNNEKNT 150 (197)
Q Consensus 87 ~~~~~~~~~~-------------~~t~l~~a~~~~~~~~~~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 150 (197)
+++++.++.. |.||||+|+..++.+++++|++ .|++++. .|..|+|
T Consensus 113 ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~------------------~d~~g~T 174 (256)
T 2etb_A 113 GADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEA------------------TDSLGNT 174 (256)
T ss_dssp TCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC------------------CCTTSCC
T ss_pred CCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCc------------------cCCCCCC
Confidence 8888888875 9999999999999999999999 8988776 8999999
Q ss_pred HHHHHHh--cCCHH-------HHHHHhhcCCCc-------ccccccCCCcHHHHHHhcccCC
Q 043188 151 ALHEAVC--HQNVD-------VVELLTKEDPDY-------QYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 151 ~l~~a~~--~~~~~-------~~~~Ll~~g~~~-------~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
|||+|+. .++.+ ++++|++.|+++ + .+|..|.||||+|+..|+.+
T Consensus 175 pLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~-~~d~~g~tpL~~A~~~g~~~ 235 (256)
T 2etb_A 175 VLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEE-ISNHQGLTPLKLAAKEGKIE 235 (256)
T ss_dssp HHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGG-CCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHcccCCchhhHHHHHHHHHHHHcCCCccccccccc-ccCCCCCCHHHHHHHhCCHH
Confidence 9999998 78888 999999999998 5 89999999999999998754
No 21
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=5.4e-31 Score=189.27 Aligned_cols=146 Identities=23% Similarity=0.265 Sum_probs=68.6
Q ss_pred cCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHH
Q 043188 24 QIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHV 103 (197)
Q Consensus 24 ~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~ 103 (197)
.+.|||+.|+..|+.+++++|++.|.+++..+..|.||||+|+ ..|+.+++++|++. .+.+++.++..|.||||+
T Consensus 43 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~~~~Ll~~---~~~~~~~~~~~g~t~L~~ 117 (237)
T 3b7b_A 43 DQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAA--KKGHYEVVQYLLSN---GQMDVNCQDDGGWTPMIW 117 (237)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHH--HTTCHHHHHHHHTT---TCCCTTCCCTTSCCHHHH
T ss_pred CCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH--HcCCHHHHHHHHhC---CCCCcccCCCCCCCHHHH
Confidence 3444444444444444444444444444444444444444444 44444444444442 113444444445555555
Q ss_pred HHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCC
Q 043188 104 AAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGK 183 (197)
Q Consensus 104 a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~ 183 (197)
|+..++.+++++|++.|+++.. .+..|.||||+|+..++.+++++|++.|++++ .++..|.
T Consensus 118 A~~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~ 178 (237)
T 3b7b_A 118 ATEYKHVDLVKLLLSKGSDINI------------------RDNEENICLHWAAFSGCVDIAEILLAAKCDLH-AVNIHGD 178 (237)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTT-CCCTTCC
T ss_pred HHHcCCHHHHHHHHHCCCCCCc------------------cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-CcCCCCC
Confidence 5555555555555555544443 34444444444444444444444444444444 4444444
Q ss_pred cHHHHHHhcc
Q 043188 184 TPLYMAADYR 193 (197)
Q Consensus 184 tpl~~A~~~~ 193 (197)
||||+|+..|
T Consensus 179 t~L~~A~~~~ 188 (237)
T 3b7b_A 179 SPLHIAAREN 188 (237)
T ss_dssp CHHHHHHHTT
T ss_pred CHHHHHHHhC
Confidence 4444444444
No 22
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=1.2e-30 Score=178.40 Aligned_cols=133 Identities=25% Similarity=0.278 Sum_probs=122.3
Q ss_pred ccccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCC
Q 043188 19 EISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGD 98 (197)
Q Consensus 19 ~~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 98 (197)
...+..|.|||+.|+..|+.+.++.|++.|.+++.++..|.||||+|+ ..|+.+++++|++. +++++.++..|.
T Consensus 31 n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~--~~g~~~~v~~Ll~~----gadvn~~d~~G~ 104 (169)
T 4gpm_A 31 NASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAA--ENGHKEVVKLLISK----GADVNAKDSDGR 104 (169)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHT----TCCTTCCCTTSC
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHH--HcCCHHHHHHHHHC----cCCCCCCCCCCC
Confidence 356778999999999999999999999999999999999999999999 99999999999986 899999999999
Q ss_pred cHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcc
Q 043188 99 TPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQ 175 (197)
Q Consensus 99 t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~ 175 (197)
||||+|+..++.+++++|++.|+++.. .|..|+||||+|+..|+.+++++|+++|+++.
T Consensus 105 TpLh~A~~~g~~~~v~~Ll~~gad~~~------------------~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 105 TPLHHAAENGHKEVVKLLISKGADVNT------------------SDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHTC-----
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccc------------------cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 999999999999999999999999876 89999999999999999999999999999975
No 23
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=7.1e-31 Score=177.27 Aligned_cols=145 Identities=21% Similarity=0.262 Sum_probs=134.1
Q ss_pred CCHHHHHHHHcCCcHHHHHHHHH-HHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHH
Q 043188 25 IDPNLFKAAAAGNLEPFKDMARE-VIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHV 103 (197)
Q Consensus 25 ~~~~l~~a~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~ 103 (197)
+.++|+.|+..|+.+.++.|++. +.+++..+..|.||||+ + ..|+.+++++|++. +.+++.++..|.||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~--~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~ 74 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-M--MFGSTAIALELLKQ----GASPNVQDTSGTSPVHD 74 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-S--CTTCHHHHHHHHHT----TCCTTCCCTTSCCHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-H--HcCCHHHHHHHHHC----CCCCCCcCCCCCCHHHH
Confidence 46899999999999999999998 22677888999999999 9 89999999999986 88899999999999999
Q ss_pred HHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCC
Q 043188 104 AAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGK 183 (197)
Q Consensus 104 a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~ 183 (197)
|+..++.+++++|++.|+++.. .+..|.||||+|+..++.+++++|++. ++++ .++..|.
T Consensus 75 A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~-~~~~~g~ 134 (156)
T 1bd8_A 75 AARTGFLDTLKVLVEHGADVNV------------------PDGTGALPIHLAVQEGHTAVVSFLAAE-SDLH-RRDARGL 134 (156)
T ss_dssp HHHTTCHHHHHHHHHTTCCSCC------------------CCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTT-CCCTTSC
T ss_pred HHHcCcHHHHHHHHHcCCCCCC------------------cCCCCCcHHHHHHHhChHHHHHHHHhc-cCCC-CcCCCCC
Confidence 9999999999999999998776 889999999999999999999999999 8888 8999999
Q ss_pred cHHHHHHhcccCC
Q 043188 184 TPLYMAADYRSSN 196 (197)
Q Consensus 184 tpl~~A~~~~~~~ 196 (197)
|||++|+..|+.+
T Consensus 135 t~l~~A~~~~~~~ 147 (156)
T 1bd8_A 135 TPLELALQRGAQD 147 (156)
T ss_dssp CHHHHHHHSCCHH
T ss_pred CHHHHHHHcCcHH
Confidence 9999999998754
No 24
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=9.3e-31 Score=190.93 Aligned_cols=148 Identities=18% Similarity=0.109 Sum_probs=92.5
Q ss_pred cccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHH
Q 043188 22 QSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPL 101 (197)
Q Consensus 22 ~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l 101 (197)
+..|.||||.|+..|+.++++.|++.|.+++..+..|.||||+|+ ..|+.+++++|++. +.+++. +..|.|||
T Consensus 33 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~-~~~g~t~L 105 (261)
T 2xai_A 33 TADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNAC--VSGSWDCVNLLLQH----GASVQP-ESDLASPI 105 (261)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HHTCHHHHHHHHHT----TCCSSC-SCTTCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHHC----CCCCCC-CCCCCCHH
Confidence 334444555555555555555555554444444444555555555 44555554444443 333332 22344555
Q ss_pred HHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccC
Q 043188 102 HVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNY 181 (197)
Q Consensus 102 ~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~ 181 (197)
|+|+..++.+++++|++.|+++ +..+..|.||||+|+..++.+++++|++.|++++ .+..
T Consensus 106 ~~A~~~~~~~~v~~Ll~~g~~~------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~ 165 (261)
T 2xai_A 106 HEAARRGHVECVNSLIAYGGNI------------------DHKISHLGTPLYLACENQQRACVKKLLESGADVN--QGKG 165 (261)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCT------------------TCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT--CCBT
T ss_pred HHHHHcCcHHHHHHHHHcCCCC------------------CcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC--CCCC
Confidence 5555555555555555554444 4488899999999999999999999999999987 4788
Q ss_pred CCcHHHHHHhcccCC
Q 043188 182 GKTPLYMAADYRSSN 196 (197)
Q Consensus 182 g~tpl~~A~~~~~~~ 196 (197)
|.||||+|+..|+.+
T Consensus 166 g~t~Lh~A~~~~~~~ 180 (261)
T 2xai_A 166 QDSPLHAVARTASEE 180 (261)
T ss_dssp TBCHHHHHHHHTCHH
T ss_pred CCChHHHHHHcCCHH
Confidence 999999999988754
No 25
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=7.3e-31 Score=187.90 Aligned_cols=148 Identities=19% Similarity=0.089 Sum_probs=112.0
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
..+..+.||||.|+..|+.+++++|++.|.+++..+..|.||||+|+ ..++.+++++|++. +.+++.++..|.|
T Consensus 68 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~~~~Ll~~----g~~~~~~~~~g~t 141 (231)
T 3aji_A 68 DKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAA--SKNRHEIAVMLLEG----GANPDAKDHYDAT 141 (231)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHT----TCCTTCCCTTSCC
T ss_pred CcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHHc----CCCCCCcCCCCCc
Confidence 34556777888888888888888888887777777777888888888 77777777777764 6677777777778
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHH---------------HHHhhccCCCCchHHHHHHhcCCHHHH
Q 043188 100 PLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAA---------------RQMIRMTNNEKNTALHEAVCHQNVDVV 164 (197)
Q Consensus 100 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~a~~~~~~~~~ 164 (197)
|||+|+..++.+++++|++.+.+++..+..+.+++..+ +.+++..+..|.||+++|+..++.+++
T Consensus 142 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~ 221 (231)
T 3aji_A 142 AMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILK 221 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHH
Confidence 88888888888888888877777766554443333322 233556889999999999999999999
Q ss_pred HHHhhcCCC
Q 043188 165 ELLTKEDPD 173 (197)
Q Consensus 165 ~~Ll~~g~~ 173 (197)
++|.+.|++
T Consensus 222 ~lL~~~~a~ 230 (231)
T 3aji_A 222 RLAEGEEAS 230 (231)
T ss_dssp HHHHHHHHC
T ss_pred HHHcccccc
Confidence 999988765
No 26
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=2.1e-30 Score=184.52 Aligned_cols=149 Identities=17% Similarity=0.077 Sum_probs=96.4
Q ss_pred ccccCCHHHHHHHHcCCcHHHHHHHHHHH-HHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 21 SQSQIDPNLFKAAAAGNLEPFKDMAREVI-ERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 21 ~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
.+..+.||||.|+..|+.+++++|++.+. +++..+..|.||||+|+ ..++.+++++|++. +.+++.++..|.|
T Consensus 54 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~--~~~~~~~~~~Ll~~----g~~~~~~~~~g~t 127 (223)
T 2f8y_A 54 QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAA--RLAVEGMLEDLINS----HADVNAVDDLGKS 127 (223)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHH--HHTCHHHHHHHHHT----TCCTTCBCTTSCB
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHH--HhCcHHHHHHHHHc----CCCCcCcCCCCCc
Confidence 34455666666666666666666666554 44455556666666666 66666666666553 5556666666666
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHH---------------HHHhhccCCCCchHHHHHHhcCCHHHH
Q 043188 100 PLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAA---------------RQMIRMTNNEKNTALHEAVCHQNVDVV 164 (197)
Q Consensus 100 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~a~~~~~~~~~ 164 (197)
|||+|+..++.+++++|++.|++++..+..+.+++..+ +.+++..+..|.||+++|+..++.+++
T Consensus 128 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~ 207 (223)
T 2f8y_A 128 ALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIV 207 (223)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHH
Confidence 66666666666666666666665555443333222221 222455888999999999999999999
Q ss_pred HHHhhcCCCcc
Q 043188 165 ELLTKEDPDYQ 175 (197)
Q Consensus 165 ~~Ll~~g~~~~ 175 (197)
++|++.|+...
T Consensus 208 ~~L~~~g~~~~ 218 (223)
T 2f8y_A 208 RLLDEYNLVRS 218 (223)
T ss_dssp HHHHHTTCSSC
T ss_pred HHHHHcCCCcc
Confidence 99999998754
No 27
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=2e-30 Score=191.53 Aligned_cols=171 Identities=19% Similarity=0.101 Sum_probs=146.9
Q ss_pred CcccccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCC
Q 043188 17 NGEISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAK 96 (197)
Q Consensus 17 ~~~~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 96 (197)
.....+..|.||||.|+..|+.+++++|++.|.+++.++..|.||||+|+ ..|+.+++++|++. +.+++.++..
T Consensus 51 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~----ga~~~~~~~~ 124 (285)
T 3d9h_A 51 PLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEAC--LGGHLSCVKILLKH----GAQVNGVTAD 124 (285)
T ss_dssp TTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHH--HTTCHHHHHHHHHT----TCCSSCCCTT
T ss_pred cccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH--HCCcHHHHHHHHHC----CCCCCCCCCC
Confidence 34456778999999999999999999999999999889999999999999 99999999999986 8889999999
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHH---------------HHHHHhhccCCCCchHHHHHHhcCCH
Q 043188 97 GDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVG---------------AARQMIRMTNNEKNTALHEAVCHQNV 161 (197)
Q Consensus 97 ~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~g~t~l~~a~~~~~~ 161 (197)
|.||||+|+..++.+++++|++.++++..... +..++. ..+.+++..+..|.||||+|+..++.
T Consensus 125 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~ 203 (285)
T 3d9h_A 125 WHTPLFNACVSGSWDCVNLLLQHGASVQPESD-LASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR 203 (285)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCT-TSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCH
T ss_pred CCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcH
Confidence 99999999999999999999999988765332 222222 12334567888999999999999999
Q ss_pred HHHHHHhhcCCCcccccccCCCcHHHHHHhcccCC
Q 043188 162 DVVELLTKEDPDYQYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 162 ~~~~~Ll~~g~~~~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
+++++|++.|++++ .+..|.||||+|+..|+.+
T Consensus 204 ~~v~~Ll~~ga~~~--~~~~g~t~L~~A~~~~~~~ 236 (285)
T 3d9h_A 204 ACVKKLLESGADVN--QGKGQDSPLHAVVRTASEE 236 (285)
T ss_dssp HHHHHHHHTTCCTT--CCBTTBCHHHHHHHTTCHH
T ss_pred HHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCCHH
Confidence 99999999999987 4888999999999988754
No 28
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=2.2e-30 Score=192.05 Aligned_cols=169 Identities=22% Similarity=0.211 Sum_probs=144.5
Q ss_pred ccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcH
Q 043188 21 SQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTP 100 (197)
Q Consensus 21 ~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~ 100 (197)
....+.++|+.|+..|+.+.|++|++.|.+++..+..|.||||+|+ ..|+.+++++|++. +.+++.++..|.||
T Consensus 36 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~----ga~~~~~~~~g~tp 109 (299)
T 1s70_B 36 VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQAC--IDDNVDMVKFLVEN----GANINQPDNEGWIP 109 (299)
T ss_dssp CEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHH--HTTCHHHHHHHHHT----TCCTTCCCTTSCCH
T ss_pred cccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH--HcCCHHHHHHHHHC----CCCCCCCCCCCCcH
Confidence 3446789999999999999999999999999989999999999999 99999999999986 88999999999999
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHH---------HHH-------------------------------
Q 043188 101 LHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAA---------RQM------------------------------- 140 (197)
Q Consensus 101 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~---------~~~------------------------------- 140 (197)
||+|+..++.+++++|+++|+++...+..+..++..+ ...
T Consensus 110 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (299)
T 1s70_B 110 LHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGH 189 (299)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccC
Confidence 9999999999999999999998877654433332211 000
Q ss_pred --hhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCCcHHHHHHhcccCC
Q 043188 141 --IRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 141 --~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
....+..|.||||+|+..|+.+++++|++.|++++ .+|..|.||||+|+..|+.+
T Consensus 190 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~-~~d~~g~tpL~~A~~~~~~~ 246 (299)
T 1s70_B 190 INDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVN-IKDYDGWTPLHAAAHWGKEE 246 (299)
T ss_dssp CCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT-CCCTTCCCHHHHHHHTTCHH
T ss_pred cchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHhcCCHH
Confidence 01134679999999999999999999999999988 89999999999999988754
No 29
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=1.4e-30 Score=191.56 Aligned_cols=154 Identities=17% Similarity=0.212 Sum_probs=139.6
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHH-HHhcccccCCcHHHHHHHh---hhcccccHHHHHHHHHhCCcccccCCC
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVI-ERLLTAKTKNTILHINIIS---QERENVSTKFVAEILEKCPSLLLQVNA 95 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~lh~a~~~---~~~~~~~~~~l~~~l~~~~~~~~~~~~ 95 (197)
..+..|.||||+|+..|+.+++++|++.|. +++..+..|.||||+|+.. ..++.++++++++. +...+..+.
T Consensus 106 ~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~----g~~~~~~~~ 181 (276)
T 4hbd_A 106 IADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRL----GNINAKASQ 181 (276)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHH----SCTTCCCTT
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHc----CCCccccCC
Confidence 456788999999999999999999999997 8888999999999999932 23667788888776 788888888
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhh-cCCCc
Q 043188 96 KGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTK-EDPDY 174 (197)
Q Consensus 96 ~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~-~g~~~ 174 (197)
.|.||||+|+..++.+++++|++.|++++. .|..|.||||+|+..|+.+++++|++ .|+++
T Consensus 182 ~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~------------------~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~ 243 (276)
T 4hbd_A 182 AGQTALMLAVSHGRVDVVKALLACEADVNV------------------QDDDGSTALMCACEHGHKEIAGLLLAVPSCDI 243 (276)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCCCC------------------CCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCC
Confidence 999999999999999999999999999876 89999999999999999999999999 89999
Q ss_pred ccccccCCCcHHHHHHhcccCC
Q 043188 175 QYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 175 ~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
+ .+|..|.|||++|+..|+.+
T Consensus 244 ~-~~d~~g~TpL~~A~~~g~~~ 264 (276)
T 4hbd_A 244 S-LTDRDGSTALMVALDAGQSE 264 (276)
T ss_dssp T-CCCTTSCCHHHHHHHHTCHH
T ss_pred c-CcCCCCCCHHHHHHHcCCHH
Confidence 8 99999999999999998754
No 30
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=4.5e-30 Score=184.74 Aligned_cols=172 Identities=19% Similarity=0.136 Sum_probs=105.7
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
..+..+.||||.|+..|+.+++++|++.|.+++..+..|.||||+|+ ..++.+++++|++.......+++.++..|.|
T Consensus 41 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~--~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t 118 (241)
T 1k1a_A 41 IYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLAC--EHRSPTCLRALLDSAAPGTLDLEARNYDGLT 118 (241)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHHSCTTSCCTTCCCTTSCC
T ss_pred cccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH--HcCCHHHHHHHHHcCCCccccccccCcCCCc
Confidence 44556777788888888777788877777777777777778888877 7777777777777511111256666777777
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCccch-hhHHhhHHH---------------HHHHhhccCCCCchHHHHHHhcCCHHH
Q 043188 100 PLHVAAKFGHSDIVRVLVERAKLPQHEN-EELESRVGA---------------ARQMIRMTNNEKNTALHEAVCHQNVDV 163 (197)
Q Consensus 100 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~~~~~~---------------~~~~~~~~~~~g~t~l~~a~~~~~~~~ 163 (197)
|||+|+..++.+++++|++.+.++.... ..+..++.. .+.+++..+..|.||||+|+..++.++
T Consensus 119 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 198 (241)
T 1k1a_A 119 ALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPL 198 (241)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 7777777777777777777777765532 111111111 122234444555555555555555555
Q ss_pred HHHHhhcCCCcccccccCCCcHHHHHHhccc
Q 043188 164 VELLTKEDPDYQYSANNYGKTPLYMAADYRS 194 (197)
Q Consensus 164 ~~~Ll~~g~~~~~~~~~~g~tpl~~A~~~~~ 194 (197)
+++|++.|++++ .+|..|.||+++|+..|+
T Consensus 199 v~~Ll~~ga~~~-~~~~~g~tpl~~A~~~~~ 228 (241)
T 1k1a_A 199 VRTLVRSGADSS-LKNCHNDTPLMVARSRRV 228 (241)
T ss_dssp HHHHHHTTCCTT-CCCTTSCCTTTTCSSHHH
T ss_pred HHHHHhcCCCCC-CcCCCCCCHHHHHHhcCc
Confidence 555555555554 555555555555554443
No 31
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=3.7e-31 Score=182.71 Aligned_cols=148 Identities=22% Similarity=0.231 Sum_probs=133.9
Q ss_pred ccCCHHHHHHHHcCCcHHHHHHHHH-HHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHH
Q 043188 23 SQIDPNLFKAAAAGNLEPFKDMARE-VIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPL 101 (197)
Q Consensus 23 ~~~~~~l~~a~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l 101 (197)
+++.++|+.|+..|+.+.++.|++. +.+++..+..|.||||+|+ ..++.+++++|++. +.+++.++..|.|||
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L 76 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWAC--REGRSAVVEMLIMR----GARINVMNRGDDTPL 76 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHT----TCCTTCCCTTCCCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHH--HcCcHHHHHHHHHc----CCCCCCcCCCCCCHH
Confidence 4567789999999999999999997 4556788899999999999 99999999999986 888999999999999
Q ss_pred HHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccC
Q 043188 102 HVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNY 181 (197)
Q Consensus 102 ~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~ 181 (197)
|+|+..++.+++++|++.|++++. .+..|.||||+|+..++.+++++|++.|++++ .++..
T Consensus 77 ~~A~~~~~~~~v~~Ll~~g~~~~~------------------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~ 137 (179)
T 3f6q_A 77 HLAASHGHRDIVQKLLQYKADINA------------------VNEHGNVPLHYACFWGQDQVAEDLVANGALVS-ICNKY 137 (179)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSS-BCCTT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCc------------------cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc-hhccC
Confidence 999999999999999999998776 89999999999999999999999999999998 99999
Q ss_pred CCcHHHHHHhcccC
Q 043188 182 GKTPLYMAADYRSS 195 (197)
Q Consensus 182 g~tpl~~A~~~~~~ 195 (197)
|.||+++|+..++.
T Consensus 138 g~tpl~~A~~~~~~ 151 (179)
T 3f6q_A 138 GEMPVDKAKAPLRE 151 (179)
T ss_dssp SCCGGGGSCHHHHH
T ss_pred CCCcHHHHHHHHHH
Confidence 99999999876653
No 32
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=2.4e-31 Score=191.13 Aligned_cols=156 Identities=25% Similarity=0.209 Sum_probs=138.2
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHh--CCcccccCCCCC
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEK--CPSLLLQVNAKG 97 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~--~~~~~~~~~~~~ 97 (197)
..+..|.||||.|+..|+.+++++|++.|.+++.++..|.||||+|+ ..++.+++++|++.... ....++..+..|
T Consensus 40 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g 117 (236)
T 1ikn_D 40 FQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLAC--EQGCLASVGVLTQSCTTPHLHSILKATNYNG 117 (236)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHH--HHTCHHHHHHHHHSTTTTSSSCGGGCCCTTC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH--HcCCHHHHHHHHhcccchhHHHHhhccCCCC
Confidence 45667899999999999999999999999998888999999999999 99999999999885110 012356778889
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCC-CCchHHHHHHhcCCHHHHHHHhhcCCCccc
Q 043188 98 DTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNN-EKNTALHEAVCHQNVDVVELLTKEDPDYQY 176 (197)
Q Consensus 98 ~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~ 176 (197)
.||||+|+..++.+++++|++.|+++.. .+. .|.||||+|+..++.+++++|++.|++++
T Consensus 118 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~- 178 (236)
T 1ikn_D 118 HTCLHLASIHGYLGIVELLVSLGADVNA------------------QEPCNGRTALHLAVDLQNPDLVSLLLKCGADVN- 178 (236)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCCTTC------------------CCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSC-
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCC------------------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-
Confidence 9999999999999999999999998776 776 99999999999999999999999999998
Q ss_pred ccccCCCcHHHHHHhcccCC
Q 043188 177 SANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 177 ~~~~~g~tpl~~A~~~~~~~ 196 (197)
.++..|.|||++|+..|+.+
T Consensus 179 ~~~~~g~tpl~~A~~~~~~~ 198 (236)
T 1ikn_D 179 RVTYQGYSPYQLTWGRPSTR 198 (236)
T ss_dssp CCCTTCCCGGGGCTTSSCHH
T ss_pred cccCCCCCHHHHHHccCchH
Confidence 99999999999999888754
No 33
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=3.1e-30 Score=184.22 Aligned_cols=149 Identities=17% Similarity=0.131 Sum_probs=106.4
Q ss_pred ccccCCHHHHHHHHcCCcHHHHHHHHHH--HHHhc-ccccCCcHHHHHHHhhhcccccHHHHHHHHHhCC--cccccCCC
Q 043188 21 SQSQIDPNLFKAAAAGNLEPFKDMAREV--IERLL-TAKTKNTILHINIISQERENVSTKFVAEILEKCP--SLLLQVNA 95 (197)
Q Consensus 21 ~~~~~~~~l~~a~~~g~~~~v~~Ll~~g--~~~~~-~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~ 95 (197)
.+..|.||||.|+..|+.+++++|++.| .++.. .+..|.||||+|+ ..|+.+++++|++. + .+++.++.
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~--~~~~~~~~~~Ll~~----g~~~~~~~~~~ 105 (228)
T 2dzn_A 32 KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC--SVGNLEVVKSLYDR----PLKPDLNKITN 105 (228)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHH--HHCCHHHHHHHHSS----SSCCCTTCCCT
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHH--HcCCHHHHHHHHhC----CCCcccccCCc
Confidence 4567788888888888888888888887 44444 6778888888888 88888888887774 4 66777788
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcC-CCc
Q 043188 96 KGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKED-PDY 174 (197)
Q Consensus 96 ~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g-~~~ 174 (197)
.|.||||+|+..++.+++++|++.|.++.. .+..|.||||+|+..++.+++++|++.| +++
T Consensus 106 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 167 (228)
T 2dzn_A 106 QGVTCLHLAVGKKWFEVSQFLIENGASVRI------------------KDKFNQIPLHRAASVGSLKLIELLCGLGKSAV 167 (228)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCSCC------------------CCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCS
T ss_pred CCCCHHHHHHHcCCHhHHHHHHHcCCCccc------------------cCCCCCCHHHHHHHcCCHHHHHHHHhcCcccc
Confidence 888888888888888888888888887766 4555555555555555555555555555 444
Q ss_pred ccccccCCCcHHHHHHhccc
Q 043188 175 QYSANNYGKTPLYMAADYRS 194 (197)
Q Consensus 175 ~~~~~~~g~tpl~~A~~~~~ 194 (197)
+ .+|..|.||||+|+..|+
T Consensus 168 ~-~~d~~g~t~L~~A~~~~~ 186 (228)
T 2dzn_A 168 N-WQDKQGWTPLFHALAEGH 186 (228)
T ss_dssp C-CCCTTSCCHHHHHHHTTC
T ss_pred c-CcCCCCCCHHHHHHHcCC
Confidence 4 555555555555555544
No 34
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=4.5e-30 Score=188.34 Aligned_cols=152 Identities=20% Similarity=0.181 Sum_probs=136.9
Q ss_pred ccccCCHHHHHHHHc---CCcHHHHHHHHHHHHH-------hc----ccccCCcHHHHHHHhhhcccccHHHHHHHHHhC
Q 043188 21 SQSQIDPNLFKAAAA---GNLEPFKDMAREVIER-------LL----TAKTKNTILHINIISQERENVSTKFVAEILEKC 86 (197)
Q Consensus 21 ~~~~~~~~l~~a~~~---g~~~~v~~Ll~~g~~~-------~~----~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~ 86 (197)
.+..+.||||+|+.. |+.+++++|++.|.+. +. .+..|.||||+|+ ..|+.+++++|++.
T Consensus 50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~--~~g~~~~v~~Ll~~---- 123 (273)
T 2pnn_A 50 DPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAI--ERRNMTLVTLLVEN---- 123 (273)
T ss_dssp CTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHH--HTTCHHHHHHHHHT----
T ss_pred cCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHH--HcCCHHHHHHHHHC----
Confidence 467899999999987 9999999999999873 32 5568999999999 99999999999996
Q ss_pred CcccccCCC--------------CCCcHHHHHHHhCCHHHHHHHHH---cCCCCccchhhHHhhHHHHHHHhhccCCCCc
Q 043188 87 PSLLLQVNA--------------KGDTPLHVAAKFGHSDIVRVLVE---RAKLPQHENEELESRVGAARQMIRMTNNEKN 149 (197)
Q Consensus 87 ~~~~~~~~~--------------~~~t~l~~a~~~~~~~~~~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 149 (197)
+.+++.++. .|.||||+|+..++.+++++|++ .|++++. .+..|+
T Consensus 124 ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~------------------~d~~g~ 185 (273)
T 2pnn_A 124 GADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISA------------------RDSVGN 185 (273)
T ss_dssp TCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC------------------CCTTSC
T ss_pred CCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCcee------------------eCCCCC
Confidence 888888886 79999999999999999999999 8888776 899999
Q ss_pred hHHHHHHhcCC---------HHHHHHHhhcCCCcc------cccccCCCcHHHHHHhcccCC
Q 043188 150 TALHEAVCHQN---------VDVVELLTKEDPDYQ------YSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 150 t~l~~a~~~~~---------~~~~~~Ll~~g~~~~------~~~~~~g~tpl~~A~~~~~~~ 196 (197)
||||+|+..++ .+++++|++.|++++ +.+|..|.||||+|+..|+.+
T Consensus 186 tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~ 247 (273)
T 2pnn_A 186 TVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIG 247 (273)
T ss_dssp CHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred cHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHH
Confidence 99999999888 899999999999986 258999999999999998754
No 35
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=2.4e-30 Score=188.39 Aligned_cols=151 Identities=25% Similarity=0.200 Sum_probs=135.2
Q ss_pred cccCCHHHHHHH---HcCCcHHHHHHHHHHHHHh-----------cccccCCcHHHHHHHhhhcccccHHHHHHHHHhCC
Q 043188 22 QSQIDPNLFKAA---AAGNLEPFKDMAREVIERL-----------LTAKTKNTILHINIISQERENVSTKFVAEILEKCP 87 (197)
Q Consensus 22 ~~~~~~~l~~a~---~~g~~~~v~~Ll~~g~~~~-----------~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~ 87 (197)
+..|.||||.|+ ..|+.++++.|++.|.+.. ..+..|.||||+|+ ..|+.+++++|++. +
T Consensus 43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~--~~g~~~~v~~Ll~~----g 116 (260)
T 3jxi_A 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAI--ERRCKHYVELLVEK----G 116 (260)
T ss_dssp TTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHH--HTTCHHHHHHHHHT----T
T ss_pred cCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHH--HcCCHHHHHHHHhC----C
Confidence 367999999999 7799999999999997632 33458999999999 99999999999996 8
Q ss_pred cccccCC--------------CCCCcHHHHHHHhCCHHHHHHHHH---cCCCCccchhhHHhhHHHHHHHhhccCCCCch
Q 043188 88 SLLLQVN--------------AKGDTPLHVAAKFGHSDIVRVLVE---RAKLPQHENEELESRVGAARQMIRMTNNEKNT 150 (197)
Q Consensus 88 ~~~~~~~--------------~~~~t~l~~a~~~~~~~~~~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 150 (197)
++++.++ ..|.||||+|+..++.+++++|++ .|++++. .|..|+|
T Consensus 117 a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~------------------~d~~g~T 178 (260)
T 3jxi_A 117 ADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRR------------------QDSRGNT 178 (260)
T ss_dssp CCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC------------------CCTTSCC
T ss_pred CCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcc------------------cCCCCCc
Confidence 8888888 689999999999999999999999 8888776 8999999
Q ss_pred HHHHHHhcCC---------HHHHHHHhhcCCCcc------cccccCCCcHHHHHHhcccCC
Q 043188 151 ALHEAVCHQN---------VDVVELLTKEDPDYQ------YSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 151 ~l~~a~~~~~---------~~~~~~Ll~~g~~~~------~~~~~~g~tpl~~A~~~~~~~ 196 (197)
|||+|+..++ .+++++|++.|++++ +.+|..|.||||+|+..|+.+
T Consensus 179 pLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~ 239 (260)
T 3jxi_A 179 VLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIG 239 (260)
T ss_dssp HHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHH
Confidence 9999998887 799999999999983 279999999999999998754
No 36
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.96 E-value=7e-30 Score=186.27 Aligned_cols=144 Identities=19% Similarity=0.187 Sum_probs=77.4
Q ss_pred CCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHHH
Q 043188 25 IDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHVA 104 (197)
Q Consensus 25 ~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~a 104 (197)
|.||||.|+..|+.+++++|++.|.+++..+..|.||||+|+ ..|+.+++++|++. +.+++.++..|.||||+|
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A 76 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEAC--LGGHLSCVKILLKH----GAQVNGVTADWHTPLFNA 76 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHH--HHTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH--HcCCHHHHHHHHHC----CCCCCCCCCCCCCHHHHH
Confidence 345555555555555555555555555555555555555555 55555555555553 455555555555555555
Q ss_pred HHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCCc
Q 043188 105 AKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKT 184 (197)
Q Consensus 105 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t 184 (197)
+..++.+++++|++.++++. .+..|.||||+|+..|+.+++++|++.|++++ .++..|.|
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~~-------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t 136 (261)
T 2xai_A 77 CVSGSWDCVNLLLQHGASVQ-------------------PESDLASPIHEAARRGHVECVNSLIAYGGNID-HKISHLGT 136 (261)
T ss_dssp HHHTCHHHHHHHHHTTCCSS-------------------CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBTTTBC
T ss_pred HHcCCHHHHHHHHHCCCCCC-------------------CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-cCCCCCCC
Confidence 55555555555555555443 22235555555555555555555555555554 55555555
Q ss_pred HHHHHHhccc
Q 043188 185 PLYMAADYRS 194 (197)
Q Consensus 185 pl~~A~~~~~ 194 (197)
|||+|+..|+
T Consensus 137 ~L~~A~~~~~ 146 (261)
T 2xai_A 137 PLYLACENQQ 146 (261)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHhCC
Confidence 5555555544
No 37
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=1.8e-30 Score=190.16 Aligned_cols=152 Identities=18% Similarity=0.209 Sum_probs=119.1
Q ss_pred cccccCCHHHHHHHHcCCcH-HHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCC
Q 043188 20 ISQSQIDPNLFKAAAAGNLE-PFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGD 98 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~-~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 98 (197)
..+..+.+||+.|+..++.+ .++.|++.|.+++.+|..|.||||+|+ ..|+.+++++|++. +++++.++..|.
T Consensus 47 ~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~--~~g~~~~v~~Ll~~----~a~~~~~~~~g~ 120 (269)
T 4b93_B 47 AADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAA--LHGRADLIPLLLKH----GANAGARNADQA 120 (269)
T ss_dssp ----------------------------CCCCTTCCCTTSCCHHHHHH--HTTCTTHHHHHHHT----TCCTTCCCTTCC
T ss_pred ccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHH--HcCcHHHHHHHHhc----CCCcCccCCCCC
Confidence 35567788999999988765 789999999999999999999999999 99999999999985 888999999999
Q ss_pred cHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCccccc
Q 043188 99 TPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSA 178 (197)
Q Consensus 99 t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~ 178 (197)
||+|+|+..++.+++++|++.|++++. .|..|.||||+|+..|+.+++++|++.|++++ .+
T Consensus 121 t~l~~a~~~~~~~~~~~Ll~~g~~~n~------------------~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn-~~ 181 (269)
T 4b93_B 121 VPLHLACQQGHFQVVKCLLDSNAKPNK------------------KDLSGNTPLIYACSGGHHELVALLLQHGASIN-AS 181 (269)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSCC------------------CCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTT-CB
T ss_pred CccccccccChHHHHHHHHHCCCCCCC------------------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC-cc
Confidence 999999999999999999999999876 89999999999999999999999999999998 99
Q ss_pred ccCCCcHHHHHHhcccCC
Q 043188 179 NNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 179 ~~~g~tpl~~A~~~~~~~ 196 (197)
+..|.||||+|+..|+.+
T Consensus 182 ~~~g~t~Lh~A~~~g~~~ 199 (269)
T 4b93_B 182 NNKGNTALHEAVIEKHVF 199 (269)
T ss_dssp CTTSCBHHHHHHHTTCHH
T ss_pred ccCCCcHHHHHHHcCCHH
Confidence 999999999999998754
No 38
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.96 E-value=2.9e-30 Score=185.70 Aligned_cols=145 Identities=13% Similarity=0.107 Sum_probs=80.3
Q ss_pred cccCCHHHHHHHHcCCcHHHHHHHHHHH----HHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCC-CC
Q 043188 22 QSQIDPNLFKAAAAGNLEPFKDMAREVI----ERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVN-AK 96 (197)
Q Consensus 22 ~~~~~~~l~~a~~~g~~~~v~~Ll~~g~----~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~ 96 (197)
+..+.+|||.|+..|+.+++++|++.+. +++..+..|.||||+|+ ..++.+++++|++. +.+++..+ ..
T Consensus 76 ~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~--~~~~~~~~~~Ll~~----g~~~~~~~~~~ 149 (241)
T 1k1a_A 76 DRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAV--NTECQETVQLLLER----GADIDAVDIKS 149 (241)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHH--HHTCHHHHHHHHHT----TCCTTCCCTTT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHH--HcCCHHHHHHHHHc----CCCcccccccC
Confidence 3445555555555555555555555544 33444555555555555 55555555555553 44444444 44
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHH---------------HHHhhccCCCCchHHHHHHhcCCH
Q 043188 97 GDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAA---------------RQMIRMTNNEKNTALHEAVCHQNV 161 (197)
Q Consensus 97 ~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~a~~~~~~ 161 (197)
|.||||+|+..++.+++++|++.|++++..+..+.+++..+ +.+++..+..|.||||+|+..++.
T Consensus 150 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~ 229 (241)
T 1k1a_A 150 GRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVI 229 (241)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcH
Confidence 55555555555555555555555555544433332222211 222445899999999999999999
Q ss_pred HHHHHHhhcCC
Q 043188 162 DVVELLTKEDP 172 (197)
Q Consensus 162 ~~~~~Ll~~g~ 172 (197)
++++.|.++++
T Consensus 230 ~i~~~l~~~~a 240 (241)
T 1k1a_A 230 DILRGKATRPA 240 (241)
T ss_dssp HHHTC------
T ss_pred HHHhhhccCCC
Confidence 99999987654
No 39
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.96 E-value=2.4e-30 Score=191.05 Aligned_cols=170 Identities=15% Similarity=0.072 Sum_probs=143.6
Q ss_pred cccccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCC
Q 043188 18 GEISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKG 97 (197)
Q Consensus 18 ~~~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 97 (197)
....+..|.||||+|+..|+.+++++|++.|.+++.. +|.||||+|+ ..|+.+++++|++. +.+++.++..|
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~--~~g~~~~v~~Ll~~----ga~~~~~d~~g 95 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAA--TLEDTKIVKILLFS----GLDDSQFDDKG 95 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHT--TSSSCHHHHHHHHT----TCCTTCCCTTS
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHH--HcCCHHHHHHHHHC----CCCCCCcCCCC
Confidence 3456778999999999999999999999999988766 4899999999 99999999999986 88899999999
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCCCccchhhH-HhhHHHHH---------HHh----hccCC-CCchHHHHHHhcCCHH
Q 043188 98 DTPLHVAAKFGHSDIVRVLVERAKLPQHENEEL-ESRVGAAR---------QMI----RMTNN-EKNTALHEAVCHQNVD 162 (197)
Q Consensus 98 ~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~~~~~~~~---------~~~----~~~~~-~g~t~l~~a~~~~~~~ 162 (197)
.||||+|+..++.+++++|++.|+++......+ ..++..+. .++ +..+. .|.||||+|+..|+.+
T Consensus 96 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~ 175 (285)
T 3kea_A 96 NTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVD 175 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHH
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHH
Confidence 999999999999999999999999888766655 45544331 111 11233 7889999999999999
Q ss_pred HHHHHhhcCCCcccccccCCCcH-HHHHHhcccCC
Q 043188 163 VVELLTKEDPDYQYSANNYGKTP-LYMAADYRSSN 196 (197)
Q Consensus 163 ~~~~Ll~~g~~~~~~~~~~g~tp-l~~A~~~~~~~ 196 (197)
++++|++.|++++ .++..|.|| ||+|+..|+.+
T Consensus 176 ~v~~Ll~~gad~n-~~~~~g~t~~L~~A~~~~~~~ 209 (285)
T 3kea_A 176 MMILLLDYMTSTN-TNNSLLFIPDIKLAIDNKDIE 209 (285)
T ss_dssp HHHHHHHHHHHTC-TTCCCBCCTTHHHHHHHTCHH
T ss_pred HHHHHHHcCCCCC-cccCCCCChHHHHHHHcCCHH
Confidence 9999999999988 888999997 99999888753
No 40
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.96 E-value=1.8e-29 Score=180.26 Aligned_cols=147 Identities=20% Similarity=0.251 Sum_probs=133.2
Q ss_pred CCHHHHHHHHcCCcHHHHHHHHHHHHHh-cccccCCcHHHHHHHhhhcccccHHHHHHHHHhCC--ccccc-CCCCCCcH
Q 043188 25 IDPNLFKAAAAGNLEPFKDMAREVIERL-LTAKTKNTILHINIISQERENVSTKFVAEILEKCP--SLLLQ-VNAKGDTP 100 (197)
Q Consensus 25 ~~~~l~~a~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~--~~~~~-~~~~~~t~ 100 (197)
|+||||.|+..|+.+.++.|++.+.+.. ..+..|.||||+|+ ..|+.+++++|++. + .+++. .+..|.||
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----~~~~~~~~~~~~~g~t~ 75 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSV--SFQAHEITSFLLSK----MENVNLDDYPDDSGWTP 75 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHT----CTTCCGGGCCCTTSCCH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHH--HcCCHHHHHHHHhc----cccccccccCCCCCCCH
Confidence 5789999999999999999999998776 48899999999999 99999999999985 5 55555 78899999
Q ss_pred HHHHHHhCCHHHHHHHHHcC--CCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCccccc
Q 043188 101 LHVAAKFGHSDIVRVLVERA--KLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSA 178 (197)
Q Consensus 101 l~~a~~~~~~~~~~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~ 178 (197)
||+|+..++.+++++|++.+ .++.. .+..|.||||+|+..++.+++++|++.|++++ .+
T Consensus 76 L~~A~~~~~~~~~~~Ll~~g~~~~~~~------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~ 136 (228)
T 2dzn_A 76 FHIACSVGNLEVVKSLYDRPLKPDLNK------------------ITNQGVTCLHLAVGKKWFEVSQFLIENGASVR-IK 136 (228)
T ss_dssp HHHHHHHCCHHHHHHHHSSSSCCCTTC------------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSC-CC
T ss_pred HHHHHHcCCHHHHHHHHhCCCCccccc------------------CCcCCCCHHHHHHHcCCHhHHHHHHHcCCCcc-cc
Confidence 99999999999999999998 65554 88899999999999999999999999999998 99
Q ss_pred ccCCCcHHHHHHhcccCC
Q 043188 179 NNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 179 ~~~g~tpl~~A~~~~~~~ 196 (197)
+..|.||||+|+..|+.+
T Consensus 137 ~~~g~t~L~~A~~~~~~~ 154 (228)
T 2dzn_A 137 DKFNQIPLHRAASVGSLK 154 (228)
T ss_dssp CTTSCCHHHHHHHTTCHH
T ss_pred CCCCCCHHHHHHHcCCHH
Confidence 999999999999988753
No 41
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=3.4e-29 Score=181.96 Aligned_cols=157 Identities=17% Similarity=0.086 Sum_probs=126.6
Q ss_pred cCCHHHHHHHHcCCcHH----HHHHHHHHHHHhc----ccccCCcHHHHHHHhhh---cccccHHHHHHHHHhCCcccc-
Q 043188 24 QIDPNLFKAAAAGNLEP----FKDMAREVIERLL----TAKTKNTILHINIISQE---RENVSTKFVAEILEKCPSLLL- 91 (197)
Q Consensus 24 ~~~~~l~~a~~~g~~~~----v~~Ll~~g~~~~~----~~~~g~t~lh~a~~~~~---~~~~~~~~l~~~l~~~~~~~~- 91 (197)
.|.|+||.|+..|+.+. +++|++.|.+++. .+..|.||||+|+ .. |+.+++++|++. +.+.+
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~--~~~~~g~~~~v~~Ll~~----g~~~~~ 74 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAV--LNLQDGVNACIMPLLQI----DKDSGN 74 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHH--HTCBTTBCTTHHHHHHH----HHHTTC
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHH--HccccchHHHHHHHHhc----CCcccc
Confidence 36799999999999984 5666668888887 7899999999999 88 999999999997 43333
Q ss_pred ----------cCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCH
Q 043188 92 ----------QVNAKGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNV 161 (197)
Q Consensus 92 ----------~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~ 161 (197)
.++..|.||||+|+..++.+++++|++.|++++......... ...+..+..|.||||+|+..|+.
T Consensus 75 ~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~-----~~~~~~~~~g~tpL~~A~~~~~~ 149 (256)
T 2etb_A 75 PKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQ-----KHQGTCFYFGELPLSLAACTKQW 149 (256)
T ss_dssp SSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGS-----CCSSSCCCSCSSHHHHHHHTTCH
T ss_pred hhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccccccccc-----ccccccccCCCCHHHHHHHcCCH
Confidence 234679999999999999999999999999987621100000 00000112399999999999999
Q ss_pred HHHHHHhh---cCCCcccccccCCCcHHHHHHhc
Q 043188 162 DVVELLTK---EDPDYQYSANNYGKTPLYMAADY 192 (197)
Q Consensus 162 ~~~~~Ll~---~g~~~~~~~~~~g~tpl~~A~~~ 192 (197)
+++++|++ .|++++ .+|..|.||||+|+..
T Consensus 150 ~~v~~Ll~~~~~ga~~n-~~d~~g~TpLh~A~~~ 182 (256)
T 2etb_A 150 DVVTYLLENPHQPASLE-ATDSLGNTVLHALVMI 182 (256)
T ss_dssp HHHHHHHHCSSCCCCTT-CCCTTSCCHHHHHHHH
T ss_pred HHHHHHHhccccCCCcC-ccCCCCCCHHHHHHHc
Confidence 99999999 999998 9999999999999983
No 42
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.96 E-value=1.2e-29 Score=182.26 Aligned_cols=150 Identities=21% Similarity=0.135 Sum_probs=140.4
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHH-HHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCC
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREV-IERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGD 98 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 98 (197)
..+..+.+||+.|+..|+.+++++|++.| .+++..+..|.||||+|+ ..++.+++++|++. +.+++.++..|.
T Consensus 72 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~--~~~~~~~~~~Ll~~----g~~~~~~~~~g~ 145 (237)
T 3b7b_A 72 PKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWAT--EYKHVDLVKLLLSK----GSDINIRDNEEN 145 (237)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHT----TCCTTCCCTTSC
T ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHH--HcCCHHHHHHHHHC----CCCCCccCCCCC
Confidence 45667899999999999999999999998 677788889999999999 99999999999985 888999999999
Q ss_pred cHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCccccc
Q 043188 99 TPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSA 178 (197)
Q Consensus 99 t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~ 178 (197)
||||+|+..++.+++++|++.++++.. .+..|.||||+|+..++.+++++|+++|++++ .+
T Consensus 146 t~L~~A~~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~-~~ 206 (237)
T 3b7b_A 146 ICLHWAAFSGCVDIAEILLAAKCDLHA------------------VNIHGDSPLHIAARENRYDCVVLFLSRDSDVT-LK 206 (237)
T ss_dssp CHHHHHHHHCCHHHHHHHHTTTCCTTC------------------CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT-CC
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCC-cc
Confidence 999999999999999999999998776 88999999999999999999999999999998 99
Q ss_pred ccCCCcHHHHHHhccc
Q 043188 179 NNYGKTPLYMAADYRS 194 (197)
Q Consensus 179 ~~~g~tpl~~A~~~~~ 194 (197)
|..|.|||++|+..++
T Consensus 207 d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 207 NKEGETPLQCASLNSQ 222 (237)
T ss_dssp CTTSCCHHHHSCTTCH
T ss_pred CCCCCCHHHHHHHHHH
Confidence 9999999999998875
No 43
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.96 E-value=1.5e-29 Score=192.68 Aligned_cols=123 Identities=17% Similarity=0.175 Sum_probs=86.6
Q ss_pred ccccCCcHHHHHHHhhhc--ccccHHHHHHHHHhCCcccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHH
Q 043188 54 TAKTKNTILHINIISQER--ENVSTKFVAEILEKCPSLLLQVNAKGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELE 131 (197)
Q Consensus 54 ~~~~g~t~lh~a~~~~~~--~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~ 131 (197)
.+..|.||||+|+ ..| +.+++++|++. +.+++.++..|.||||+|+..++.+++++|++.+++...
T Consensus 134 ~~~~g~t~L~~A~--~~g~~~~~~v~~Ll~~----ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------ 201 (364)
T 3ljn_A 134 KHCKGQTALHWCV--GLGPEYLEMIKILVQL----GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSS------ 201 (364)
T ss_dssp EEESCCCHHHHHH--HSCGGGHHHHHHHHHH----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSS------
T ss_pred CCCCCCCHHHHHH--HcCCchHHHHHHHHHc----CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccc------
Confidence 4445555555555 555 55555555554 555555555555555555555555555555555554100
Q ss_pred hhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCCcHHHHHHhcccCC
Q 043188 132 SRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 132 ~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
.+++..+..|.||||+|+..|+.+++++|++.|++++ .+|..|.|||++|+..|+.+
T Consensus 202 -------~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~-~~d~~g~tpL~~A~~~g~~~ 258 (364)
T 3ljn_A 202 -------LRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVN-MEDNEHTVPLYLSVRAAMVL 258 (364)
T ss_dssp -------CCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTT-CCCTTSCCHHHHHHHTCCHH
T ss_pred -------ccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHhChHH
Confidence 0134588899999999999999999999999999998 99999999999999998754
No 44
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=1.8e-29 Score=196.39 Aligned_cols=165 Identities=21% Similarity=0.178 Sum_probs=102.1
Q ss_pred cCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHH
Q 043188 24 QIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHV 103 (197)
Q Consensus 24 ~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~ 103 (197)
.+.+||+.|+..|+.+++++|++.|.+++..+..|.||||+|+ ..|+.+++++|++. +.+++..+..|.||||+
T Consensus 211 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~----~~~~~~~~~~g~t~L~~ 284 (437)
T 1n11_A 211 NGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAA--QEGHAEMVALLLSK----QANGNLGNKSGLTPLHL 284 (437)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH--HTTCHHHHHHHHTT----TCCTTCCCTTCCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH--HCCCHHHHHHHHhc----CCCCCCCCCCCCCHHHH
Confidence 4455555555555555555555555554444455555555555 55555555555443 44444445555555555
Q ss_pred HHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHH---------------HHHhhccCCCCchHHHHHHhcCCHHHHHHHh
Q 043188 104 AAKFGHSDIVRVLVERAKLPQHENEELESRVGAA---------------RQMIRMTNNEKNTALHEAVCHQNVDVVELLT 168 (197)
Q Consensus 104 a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 168 (197)
|+..++.+++++|++.+.+++..+..+.+++..+ +.+++..+..|.||||+|+..|+.+++++|+
T Consensus 285 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll 364 (437)
T 1n11_A 285 VAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLL 364 (437)
T ss_dssp HHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHH
Confidence 5555555555555555544444332222222211 1223458889999999999999999999999
Q ss_pred hcCCCcccccccCCCcHHHHHHhcccC
Q 043188 169 KEDPDYQYSANNYGKTPLYMAADYRSS 195 (197)
Q Consensus 169 ~~g~~~~~~~~~~g~tpl~~A~~~~~~ 195 (197)
+.|++++ .+|..|.||+++|.+.|+.
T Consensus 365 ~~ga~~~-~~~~~g~t~l~~A~~~g~~ 390 (437)
T 1n11_A 365 KNGASPN-EVSSDGTTPLAIAKRLGYI 390 (437)
T ss_dssp HTTCCSC-CCCSSSCCHHHHHHHTTCH
T ss_pred HCcCCCC-CCCCCCCCHHHHHHHcCcH
Confidence 9999988 8999999999999998864
No 45
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.96 E-value=7.1e-30 Score=192.55 Aligned_cols=175 Identities=15% Similarity=0.153 Sum_probs=128.9
Q ss_pred ccccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhccc-ccCCcHHHHHHHhhhcccccHHHHHHH---------------
Q 043188 19 EISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTA-KTKNTILHINIISQERENVSTKFVAEI--------------- 82 (197)
Q Consensus 19 ~~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~lh~a~~~~~~~~~~~~~l~~~--------------- 82 (197)
.....+++|+|+.|++.|++++|+.||++|++++.++ ..|.||||+|+ ..|+.+++++|++.
T Consensus 19 ~~~~~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~--~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~ 96 (337)
T 4g8k_A 19 RRAAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAV--QMSREDIVELLLRHGADPVLRKKNGATPF 96 (337)
T ss_dssp --CHHHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHH--HTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHH--HcCCHHHHHHHHHcCCchhhhccCCCchh
Confidence 3445567899999999999999999999999998665 45899999999 99999999999874
Q ss_pred --------------HHhCCcccccCCC-------------------------------------------CCCcHHHHHH
Q 043188 83 --------------LEKCPSLLLQVNA-------------------------------------------KGDTPLHVAA 105 (197)
Q Consensus 83 --------------l~~~~~~~~~~~~-------------------------------------------~~~t~l~~a~ 105 (197)
+...+.+++.++. .|.||||+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~ 176 (337)
T 4g8k_A 97 ILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAA 176 (337)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHH
T ss_pred HHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHH
Confidence 0011112222222 3567777777
Q ss_pred HhCCHHHHHHHHH-cCCCCccchhhHHhhH-------------------HHHHHHhhccCCCCchHHHHHHhcCCHHHHH
Q 043188 106 KFGHSDIVRVLVE-RAKLPQHENEELESRV-------------------GAARQMIRMTNNEKNTALHEAVCHQNVDVVE 165 (197)
Q Consensus 106 ~~~~~~~~~~ll~-~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 165 (197)
..|+.+++++|++ .|++++..+..+...+ ...+.+++..+..|.||||+|+..++.++++
T Consensus 177 ~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~ 256 (337)
T 4g8k_A 177 EKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQ 256 (337)
T ss_dssp HHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHH
T ss_pred HCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHH
Confidence 7777777777774 3666555433222111 1223446778889999999999999999999
Q ss_pred HHhhc-CCCcccccccCCCcHHHHHHhcccCC
Q 043188 166 LLTKE-DPDYQYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 166 ~Ll~~-g~~~~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
+|++. |++++ .+|..|.||||+|++.|+.+
T Consensus 257 ~Ll~~~~~~vn-~~d~~G~TpL~~A~~~g~~~ 287 (337)
T 4g8k_A 257 RLLEQEHIEIN-DTDSDGKTALLLAVELKLKK 287 (337)
T ss_dssp HHHTSTTCCTT-CBCTTSCBHHHHHHHTTCHH
T ss_pred HHHHhcCCccc-CcCCCCCCHHHHHHHcCCHH
Confidence 99974 78888 89999999999999998754
No 46
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=2.9e-29 Score=180.11 Aligned_cols=170 Identities=21% Similarity=0.192 Sum_probs=146.1
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHh-cccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCC
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERL-LTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGD 98 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 98 (197)
..+..+.|+|+.|+..|+.+++++|++.|.+++ ..+..|.||||+|+ ..++.+++++|++. +.+++.++..|.
T Consensus 37 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~~~~g~ 110 (240)
T 3eu9_A 37 QPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWAT--RQGHLSMVVQLMKY----GADPSLIDGEGC 110 (240)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHH--HHTCHHHHHHHHHT----TCCTTCCCTTSC
T ss_pred CCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHH--HcCCHHHHHHHHHc----CCCCcccCCCCC
Confidence 455678899999999999999999999998877 44456999999999 99999999999885 888898999999
Q ss_pred cHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHH----------------HHHhhccCC-CCchHHHHHHhcCCH
Q 043188 99 TPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAA----------------RQMIRMTNN-EKNTALHEAVCHQNV 161 (197)
Q Consensus 99 t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~-~g~t~l~~a~~~~~~ 161 (197)
||||+|+..++.+++++|++.+.++...+..+..++..+ +.+++..+. .|.||||+|+..++.
T Consensus 111 t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 190 (240)
T 3eu9_A 111 SCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNT 190 (240)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCH
T ss_pred CHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCH
Confidence 999999999999999999999998877665554444432 223455555 899999999999999
Q ss_pred HHHHHHhhcCCCcccccccCCCcHHHHHHhcccCC
Q 043188 162 DVVELLTKEDPDYQYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 162 ~~~~~Ll~~g~~~~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
+++++|++.|++++ .++..|.||+++|++.|+.+
T Consensus 191 ~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~ 224 (240)
T 3eu9_A 191 TVISLLLEAGANVD-AQNIKGESALDLAKQRKNVW 224 (240)
T ss_dssp HHHHHHHHHTCCTT-CBCTTSCBHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCcHH
Confidence 99999999999998 99999999999999998754
No 47
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.96 E-value=3.9e-29 Score=184.60 Aligned_cols=164 Identities=18% Similarity=0.164 Sum_probs=139.3
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
..+..|.||||+|+..|+.+++++|++.|.+++..+..|.||||+|+ ..++.+++++|++. +.+++.. ..|.|
T Consensus 87 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~-~~g~t 159 (285)
T 3d9h_A 87 IITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNAC--VSGSWDCVNLLLQH----GASVQPE-SDLAS 159 (285)
T ss_dssp EECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHH--HHTCHHHHHHHHHT----TCCSSCS-CTTSC
T ss_pred CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHH--HcCHHHHHHHHHHC----CCCCCCC-CCCCC
Confidence 45678899999999999999999999999988888999999999999 99999999999885 6666653 35899
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHH---------------HHHhhccCCCCchHHHHHHhcCCHHHH
Q 043188 100 PLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAA---------------RQMIRMTNNEKNTALHEAVCHQNVDVV 164 (197)
Q Consensus 100 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~a~~~~~~~~~ 164 (197)
|||+|+..++.+++++|++.+.+++..+..+..++..+ +.+++ .+..|.||||+|+..++.+++
T Consensus 160 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~g~t~L~~A~~~~~~~~v 238 (285)
T 3d9h_A 160 PIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN-QGKGQDSPLHAVVRTASEELA 238 (285)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBTTBCHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC-CCCCCCCHHHHHHHcCCHHHH
Confidence 99999999999999999999988877665554444322 22234 477899999999999999999
Q ss_pred HHHhhcCCCcccccccCCCcHHHHHHhc
Q 043188 165 ELLTKEDPDYQYSANNYGKTPLYMAADY 192 (197)
Q Consensus 165 ~~Ll~~g~~~~~~~~~~g~tpl~~A~~~ 192 (197)
++|++.|++++ .+|..|+|||++|+..
T Consensus 239 ~~Ll~~gad~~-~~d~~g~t~l~~A~~~ 265 (285)
T 3d9h_A 239 CLLMDFGADTQ-AKNAEGKRPVELVPPE 265 (285)
T ss_dssp HHHHHTTCCTT-CCCTTSCCGGGGSCTT
T ss_pred HHHHHCCCCCC-CcCCCCCCHHHHhcCc
Confidence 99999999998 9999999999999844
No 48
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=8.5e-29 Score=173.56 Aligned_cols=147 Identities=20% Similarity=0.229 Sum_probs=134.5
Q ss_pred ccCCHHHHHHHHcCCcHHHHHHHHHHH-HHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHH
Q 043188 23 SQIDPNLFKAAAAGNLEPFKDMAREVI-ERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPL 101 (197)
Q Consensus 23 ~~~~~~l~~a~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l 101 (197)
+.+.++|+.|+..|+.+.++.|+..+. +++..+..|.||||+|+ ..|+.+++++|++. +.+++.++..|.|||
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~l 76 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAV--HNNDIEIAKALIDR----GADINLQNSISDSPY 76 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHH--HHTCHHHHHHHHHT----TCCTTCCCTTSCCHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHHc----CCCCCCCCCCCCCHH
Confidence 456789999999999999999999876 78888899999999999 99999999999986 889999999999999
Q ss_pred HHHHHhCCHHHHHHHHH-cCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcC-CCcccccc
Q 043188 102 HVAAKFGHSDIVRVLVE-RAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKED-PDYQYSAN 179 (197)
Q Consensus 102 ~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g-~~~~~~~~ 179 (197)
|+|+..++.+++++|++ .+.++.. .+..|.||||+|+..++.+++++|++.| ++++ .++
T Consensus 77 ~~A~~~~~~~~~~~Ll~~~~~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~ 137 (201)
T 3hra_A 77 LYAGAQGRTEILAYMLKHATPDLNK------------------HNRYGGNALIPAAEKGHIDNVKLLLEDGREDID-FQN 137 (201)
T ss_dssp HHHHHTTCHHHHHHHHHHSCCCTTC------------------CCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTT-CCC
T ss_pred HHHHHcCCHHHHHHHHhccCccccc------------------ccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcC-CCC
Confidence 99999999999999995 4555554 8889999999999999999999999999 7877 899
Q ss_pred cCCCcHHHHHHhccc
Q 043188 180 NYGKTPLYMAADYRS 194 (197)
Q Consensus 180 ~~g~tpl~~A~~~~~ 194 (197)
..|.||||+|+..++
T Consensus 138 ~~g~t~L~~A~~~~~ 152 (201)
T 3hra_A 138 DFGYTALIEAVGLRE 152 (201)
T ss_dssp TTSCCHHHHHHHSSC
T ss_pred CCCCCHHHHHHHhcc
Confidence 999999999998775
No 49
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=2.5e-29 Score=186.41 Aligned_cols=148 Identities=18% Similarity=0.165 Sum_probs=128.8
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCC-----
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVN----- 94 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~----- 94 (197)
..+..|.||||.|+..|+.+++++|++.|.+++..+..|.||||+|+ ..|+.+++++|++. +.+++.++
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~--~~g~~~~v~~Ll~~----g~~~~~~~~~g~t 141 (299)
T 1s70_B 68 YANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAA--SCGYLDIAEYLISQ----GAHVGAVNSEGDT 141 (299)
T ss_dssp CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HHTCHHHHHHHHHT----TCCTTCCCTTSCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH--HcCCHHHHHHHHhC----CCCCCCcCCCCCC
Confidence 45667899999999999999999999999999988999999999999 99999999999885 55554444
Q ss_pred -------------------------------------------------------CCCCcHHHHHHHhCCHHHHHHHHHc
Q 043188 95 -------------------------------------------------------AKGDTPLHVAAKFGHSDIVRVLVER 119 (197)
Q Consensus 95 -------------------------------------------------------~~~~t~l~~a~~~~~~~~~~~ll~~ 119 (197)
..|.||||+|+..++.+++++|++.
T Consensus 142 ~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 221 (299)
T 1s70_B 142 PLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQA 221 (299)
T ss_dssp HHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTT
T ss_pred HHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHc
Confidence 3466777788888888888888888
Q ss_pred CCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCCcHHHHHHhc
Q 043188 120 AKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKTPLYMAADY 192 (197)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~tpl~~A~~~ 192 (197)
|++++. .|..|.||||+|+..|+.+++++|++.|++++ .+|..|.||+++|+..
T Consensus 222 g~d~~~------------------~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~-~~d~~g~t~l~~A~~~ 275 (299)
T 1s70_B 222 RYDVNI------------------KDYDGWTPLHAAAHWGKEEACRILVENLCDME-AVNKVGQTAFDVADED 275 (299)
T ss_dssp TCCTTC------------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCTTTSCCSG
T ss_pred CCCCCC------------------cCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHH
Confidence 777665 89999999999999999999999999999998 9999999999999653
No 50
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=1.9e-29 Score=166.69 Aligned_cols=131 Identities=15% Similarity=0.090 Sum_probs=122.9
Q ss_pred cccccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCC-
Q 043188 18 GEISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAK- 96 (197)
Q Consensus 18 ~~~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~- 96 (197)
....+..+.||||.|+..|+.+++++|++.|.+++.++..|.||||+|+ . ++.+++++|++. +.+++.++..
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~-~~~~~v~~Ll~~----g~~~~~~~~~~ 77 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMM--M-GSAQVAELLLLH----GAEPNCADPAT 77 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTST--T-SCHHHHHHHHHH----TCCSSCCBTTT
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHH--c-CCHHHHHHHHHC----CCCCCCcCCCC
Confidence 3456678899999999999999999999999999989999999999999 9 999999999997 8889999999
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCC
Q 043188 97 GDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPD 173 (197)
Q Consensus 97 ~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 173 (197)
|.||||+|+..++.+++++|++.++++.. .+..|.||||+|+..++.+++++|+++|+|
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------------------~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 78 LTRPVHDAAREGFLDTLVVLHRAGARLDV------------------CDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTCCCCCC------------------CSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCc------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999876 899999999999999999999999999875
No 51
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=8.1e-29 Score=181.65 Aligned_cols=169 Identities=18% Similarity=0.179 Sum_probs=130.7
Q ss_pred ccccccCCHHHHHHHHcCCcHHHHHHHHHHHHHh--------cccccCCcHHHHHHHhhh---cccccHHHHHHHHHhCC
Q 043188 19 EISQSQIDPNLFKAAAAGNLEPFKDMAREVIERL--------LTAKTKNTILHINIISQE---RENVSTKFVAEILEKCP 87 (197)
Q Consensus 19 ~~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~--------~~~~~g~t~lh~a~~~~~---~~~~~~~~l~~~l~~~~ 87 (197)
...+..+.|+||.|+..|+.+.|+.|++.+.+.. ..+..|.||||+|+ .. |+.+++++|++......
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~--~~~~~g~~~~v~~Ll~~ga~~~ 84 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAM--LNLHNGQNDTIALLLDVARKTD 84 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHH--HSCBTTBCHHHHHHHHHHHHTT
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHH--HHHhcCChHHHHHHHHhhcccc
Confidence 3466788999999999999999999999876543 24779999999999 76 99999999999732211
Q ss_pred -------cccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCC
Q 043188 88 -------SLLLQVNAKGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQN 160 (197)
Q Consensus 88 -------~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~ 160 (197)
.....++..|.||||+|+..++.+++++|++.|+++.......... .......+..|.||||+|+..++
T Consensus 85 ~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~----~~~~~~~~~~g~tpL~~A~~~g~ 160 (273)
T 2pnn_A 85 SLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFK----KTKGRPGFYFGELPLSLAACTNQ 160 (273)
T ss_dssp CHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGS----SCSSSCCCCSCBSHHHHHHHTTC
T ss_pred chhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccc----cccccccccCCCCHHHHHHHcCC
Confidence 1122256689999999999999999999999999987621100000 00000111379999999999999
Q ss_pred HHHHHHHhh---cCCCcccccccCCCcHHHHHHhccc
Q 043188 161 VDVVELLTK---EDPDYQYSANNYGKTPLYMAADYRS 194 (197)
Q Consensus 161 ~~~~~~Ll~---~g~~~~~~~~~~g~tpl~~A~~~~~ 194 (197)
.+++++|++ .|++++ .+|..|.||||+|+..|+
T Consensus 161 ~~~v~~Ll~~~~~gad~~-~~d~~g~tpLh~A~~~~~ 196 (273)
T 2pnn_A 161 LAIVKFLLQNSWQPADIS-ARDSVGNTVLHALVEVAD 196 (273)
T ss_dssp HHHHHHHHHCSSCCCCTT-CCCTTSCCHHHHHHHHCC
T ss_pred HHHHHHHHhcccCCCCce-eeCCCCCcHHHHHHHccC
Confidence 999999999 999998 999999999999998775
No 52
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.96 E-value=2.8e-29 Score=184.39 Aligned_cols=173 Identities=17% Similarity=0.133 Sum_probs=128.7
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHH---------------
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILE--------------- 84 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~--------------- 84 (197)
..+..|.||||+|+..|+.+++++|+++|.+++.++..|.||||+|+ ..++.+++++|++...
T Consensus 40 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~--~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 117 (282)
T 1oy3_D 40 LQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLAC--RVRAHTCACVLLQPRPSHPRDASDTYLTQSQ 117 (282)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHT--TTTCHHHHHHHSSSCCSSCCCC---------
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH--HcCCcchhHhhhccCCCCchhhHHHHhhccc
Confidence 45667889999999999999999999999999888889999999999 9999999888876300
Q ss_pred ----------------------------hCCcccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhh-HHhhHH
Q 043188 85 ----------------------------KCPSLLLQVNAKGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEE-LESRVG 135 (197)
Q Consensus 85 ----------------------------~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-~~~~~~ 135 (197)
..+..++.++..|.||||+|+..++.+++++|++.|+++...... +.+++.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~ 197 (282)
T 1oy3_D 118 DCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLH 197 (282)
T ss_dssp --------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHH
T ss_pred ccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHH
Confidence 011347778888999999999999999999999988887776532 333333
Q ss_pred H---------------HHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCCcHHHHHHhcccC
Q 043188 136 A---------------ARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKTPLYMAADYRSS 195 (197)
Q Consensus 136 ~---------------~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~tpl~~A~~~~~~ 195 (197)
. .+.+++..+..|.||||+|+..++.+++++|+++|++++ .++..|.||+++|......
T Consensus 198 ~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~tpl~~a~~~~~~ 271 (282)
T 1oy3_D 198 LAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEP-EDGGDKLSPCSSSGSDSDS 271 (282)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCC-CCC----------------
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcC-cCCCcccccccccCCcccc
Confidence 2 234467789999999999999999999999999999998 9999999999999876553
No 53
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=6.4e-31 Score=188.35 Aligned_cols=152 Identities=20% Similarity=0.171 Sum_probs=134.7
Q ss_pred ccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcH
Q 043188 21 SQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTP 100 (197)
Q Consensus 21 ~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~ 100 (197)
....+.++|+.|+..|+.+++++|++.|.+++..+..|.||||+|+ ..|+.+++++|++. +.+++.++..|.||
T Consensus 17 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~--~~g~~~~v~~Ll~~----ga~~n~~d~~g~tp 90 (229)
T 2vge_A 17 ARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAI--CGANYSIVDFLITA----GANVNSPDSHGWTP 90 (229)
T ss_dssp TTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHT----TCCTTCCCTTCCCH
T ss_pred cccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHHC----CCCCCCCCCCCCCH
Confidence 4456678999999999999999999999999999999999999999 99999999999986 89999999999999
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccC-CCCchHHHHH--HhcCCHHHHHHHhhcCCCcc--
Q 043188 101 LHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTN-NEKNTALHEA--VCHQNVDVVELLTKEDPDYQ-- 175 (197)
Q Consensus 101 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~l~~a--~~~~~~~~~~~Ll~~g~~~~-- 175 (197)
||+|+..++.+++++|++.|+++.. .+ ..|.||||+| +..++.+++++|++.|++++
T Consensus 91 Lh~A~~~g~~~~v~~Ll~~ga~~~~------------------~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~ 152 (229)
T 2vge_A 91 LHCAASCNDTVICMALVQHGAAIFA------------------TTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLM 152 (229)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCTTC------------------CCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccc------------------ccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccc
Confidence 9999999999999999999999876 54 6999999999 99999999999999765542
Q ss_pred -----------------------------cccccCCCcHHHHHHhcccCC
Q 043188 176 -----------------------------YSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 176 -----------------------------~~~~~~g~tpl~~A~~~~~~~ 196 (197)
+.+|..|.||||+|+..|+.+
T Consensus 153 ~~~~~~~l~~~~~~~~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~ 202 (229)
T 2vge_A 153 NSGAVYALWDYSAEFGDELSFREGESVTVLRRDGPEETDWWWAALHGQEG 202 (229)
T ss_dssp GGGEEEESSCBCCSSTTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEE
T ss_pred cCCchHHHHHHhhccccccCccccccccccccCCCcccHHHHHHHcCCcc
Confidence 145667888888888877654
No 54
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.96 E-value=1.2e-29 Score=193.22 Aligned_cols=169 Identities=18% Similarity=0.230 Sum_probs=126.3
Q ss_pred ccccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCC
Q 043188 19 EISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGD 98 (197)
Q Consensus 19 ~~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 98 (197)
...+..+.|+||+|+..|+.++|++|++.|.+++..+..|.||||+|+ ..|+.+++++|++. +...+ +..|.
T Consensus 14 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~--~~g~~~~v~~Ll~~----g~~~~--~~~g~ 85 (364)
T 3ljn_A 14 IKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLAC--KFGCVDTAKYLASV----GEVHS--LWHGQ 85 (364)
T ss_dssp --CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH--HHCCHHHHHHHHHH----CCCCC--CBTTB
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHH--HcCCHHHHHHHHHC----CCCcc--ccCCC
Confidence 345677888888888888888888888888888888888888888888 88888888888886 54332 23567
Q ss_pred cHHHHHHHhCCHHHHHHHHHc----CCCCcc-----------------ch-----------------hhHHhhHHHHHHH
Q 043188 99 TPLHVAAKFGHSDIVRVLVER----AKLPQH-----------------EN-----------------EELESRVGAARQM 140 (197)
Q Consensus 99 t~l~~a~~~~~~~~~~~ll~~----~~~~~~-----------------~~-----------------~~~~~~~~~~~~~ 140 (197)
||||+|+..++.+++++|++. +..+.. .+ .+.-..+...+.+
T Consensus 86 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~ 165 (364)
T 3ljn_A 86 KPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS 165 (364)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC
T ss_pred CHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC
Confidence 777777777777777777776 433322 11 1111112222344
Q ss_pred hhccCCCCchHHHHHHhcCCHHHHHHHhhcCCC-----cccccccCCCcHHHHHHhcccCC
Q 043188 141 IRMTNNEKNTALHEAVCHQNVDVVELLTKEDPD-----YQYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 141 ~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~-----~~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
++..+..|.||||+|+..|+.+++++|++.|++ ++ ..+..|.||||+|+..|+.+
T Consensus 166 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~~~~~g~t~L~~A~~~g~~~ 225 (364)
T 3ljn_A 166 PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLD-YANKQGNSHLHWAILINWED 225 (364)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTT-CCCTTCCCTTHHHHTTTCHH
T ss_pred CcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccc-ccCCCCCcHHHHHHHcCCHH
Confidence 566888999999999999999999999999998 77 88999999999999988754
No 55
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.96 E-value=2.1e-30 Score=186.22 Aligned_cols=158 Identities=23% Similarity=0.263 Sum_probs=134.3
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHH----HhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCC
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIE----RLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNA 95 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~----~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 95 (197)
..+..|.||||.|+..|+.++++.|++.+.. ++..+..|.||||+|+ ..|+.+++++|++. +.+++.++.
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~~~ 76 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAV--ITNQPEIAEALLGA----GCDPELRDF 76 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHH--HTTCHHHHHCCCSC----CCCSCCCCT
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHH--HcCCHHHHHHHHHc----CCCCCCcCC
Confidence 3467889999999999999999999998773 5678889999999999 99999999999885 889999999
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcc
Q 043188 96 KGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQ 175 (197)
Q Consensus 96 ~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~ 175 (197)
.|.||||+|+..++.+++++|++.+...... ..++..+..|.||||+|+..++.+++++|++.|++++
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 144 (236)
T 1ikn_D 77 RGNTPLHLACEQGCLASVGVLTQSCTTPHLH------------SILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN 144 (236)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHSTTTTSSS------------CGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcccchhHH------------HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999999999999999999998753210 1134578899999999999999999999999999998
Q ss_pred ccccc-CCCcHHHHHHhcccCC
Q 043188 176 YSANN-YGKTPLYMAADYRSSN 196 (197)
Q Consensus 176 ~~~~~-~g~tpl~~A~~~~~~~ 196 (197)
.++. .|.||||+|+..|+.+
T Consensus 145 -~~~~~~g~tpL~~A~~~~~~~ 165 (236)
T 1ikn_D 145 -AQEPCNGRTALHLAVDLQNPD 165 (236)
T ss_dssp -CCCTTTCCCHHHHHHHTTCHH
T ss_pred -CCCCCCCCCHHHHHHHcCCHH
Confidence 7776 9999999999988753
No 56
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=7.2e-29 Score=182.19 Aligned_cols=167 Identities=16% Similarity=0.126 Sum_probs=104.1
Q ss_pred cccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHH
Q 043188 22 QSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPL 101 (197)
Q Consensus 22 ~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l 101 (197)
+..+.||||.|+..|+.+++++|++.|.+++..+..|.||||+|+ ..|+.+++++|++. +.+++.++..|.|||
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L 109 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAA--IAGSVKLLKLFLSK----GADVNECDFYGFTAF 109 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH--HHTCHHHHHHHHHT----TCCTTCBCTTCCBHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH--HcCCHHHHHHHHHc----CCCCCccCcccCCHH
Confidence 445667777777777777777777777766666667777777777 77777777777664 566666666666666
Q ss_pred HHHHHhCCHHHHHHHHHcCCCCccc--------------------------------------------hhhHHhhHH--
Q 043188 102 HVAAKFGHSDIVRVLVERAKLPQHE--------------------------------------------NEELESRVG-- 135 (197)
Q Consensus 102 ~~a~~~~~~~~~~~ll~~~~~~~~~--------------------------------------------~~~~~~~~~-- 135 (197)
|+|+..++.+++++|++.+.++... +..+..++.
T Consensus 110 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a 189 (285)
T 1wdy_A 110 MEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHA 189 (285)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHH
T ss_pred HHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHH
Confidence 6666666666666666666554432 111111111
Q ss_pred -----------------HHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhh-cCCCcccccccCCCcHHHHHHhcccC
Q 043188 136 -----------------AARQMIRMTNNEKNTALHEAVCHQNVDVVELLTK-EDPDYQYSANNYGKTPLYMAADYRSS 195 (197)
Q Consensus 136 -----------------~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~-~g~~~~~~~~~~g~tpl~~A~~~~~~ 195 (197)
..+.+++..+..|.||||+|+..++.+++++|++ .|++++ .+|..|.|||++|+..|+.
T Consensus 190 ~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~-~~~~~g~t~l~~A~~~~~~ 266 (285)
T 1wdy_A 190 LLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN-DTDSDGKTALLLAVELKLK 266 (285)
T ss_dssp HHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTT-CCCTTSCCHHHHHHHTTCH
T ss_pred HHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCcc-ccCCCCCcHHHHHHHcCcH
Confidence 1112234455566666666666666666666666 566665 6666666666666666553
No 57
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=2.7e-29 Score=180.97 Aligned_cols=147 Identities=17% Similarity=0.056 Sum_probs=104.8
Q ss_pred cCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHH
Q 043188 24 QIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHV 103 (197)
Q Consensus 24 ~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~ 103 (197)
.|.|+|+.|+..|+.+.++.|+++|.+++.. ..|.||||+|+ ..|+.+++++|++. +.+++.++..|.||||+
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~--~~g~~~~v~~Ll~~----g~~~~~~d~~g~t~L~~ 76 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSS--LEGEFDLVQRIIYE----VDDPSLPNDEGITALHN 76 (239)
T ss_dssp ----------------------------------CHHHHHHHH--HHTCHHHHHHHTST----TSSCCCCCTTSCCHHHH
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHH--HcCCHHHHHHHHHc----CCCCCCcCCCCCCHHHH
Confidence 5789999999999999999999999998865 47899999999 99999999999885 78899999999999999
Q ss_pred HHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCC
Q 043188 104 AAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGK 183 (197)
Q Consensus 104 a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~ 183 (197)
|+..++.+++++|+++|++++. .|..|.||||+|+..++.+++++|++.|++++ .++..|.
T Consensus 77 A~~~g~~~~v~~Ll~~ga~~~~------------------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~~~ 137 (239)
T 1ycs_B 77 AVCAGHTEIVKFLVQFGVNVNA------------------ADSDGWTPLHCAASCNNVQVCKFLVESGAAVF-AMTYSDM 137 (239)
T ss_dssp HHHHTCHHHHHHHHHHTCCTTC------------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCSSSC
T ss_pred HHHcCCHHHHHHHHHcCCCCCc------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-eecCCCC
Confidence 9999999999999999998776 89999999999999999999999999999998 7777666
Q ss_pred -cHHHHH--HhcccCC
Q 043188 184 -TPLYMA--ADYRSSN 196 (197)
Q Consensus 184 -tpl~~A--~~~~~~~ 196 (197)
||+|+| +..|+.+
T Consensus 138 ~t~l~~a~~~~~g~~~ 153 (239)
T 1ycs_B 138 QTAADKCEEMEEGYTQ 153 (239)
T ss_dssp CCHHHHCCSSSTTCCC
T ss_pred cchHHHHHHhhhccHH
Confidence 999999 6666654
No 58
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.96 E-value=8.1e-29 Score=192.72 Aligned_cols=170 Identities=22% Similarity=0.249 Sum_probs=136.2
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
..+..|.||||.|+..|+.++|++|+++|.+++..+..|.||||+|+ ..|+.+++++|++. +.+++.++..|.|
T Consensus 9 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~--~~g~~~~v~~Ll~~----g~~~~~~~~~g~t 82 (437)
T 1n11_A 9 GGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAA--RAGHTEVAKYLLQN----KAKVNAKAKDDQT 82 (437)
T ss_dssp ------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHH--HHTCHHHHHHHHHH----TCCSSCCCTTSCC
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHhC----CCCCCCCCCCCCC
Confidence 34567888899999999999999999988888888888899999999 88999999888886 7888888888899
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHH---------------HHHhhccCCCCchHHHHHHhcCCHHHH
Q 043188 100 PLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAA---------------RQMIRMTNNEKNTALHEAVCHQNVDVV 164 (197)
Q Consensus 100 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~g~t~l~~a~~~~~~~~~ 164 (197)
|||+|+..|+.+++++|+++|+++......+..++..+ +...+..+..|.||||+|+..|+.+++
T Consensus 83 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v 162 (437)
T 1n11_A 83 PLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVA 162 (437)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHH
Confidence 99999999999999999998888776555444433322 112344577899999999999999999
Q ss_pred HHHhhcCCCcccccccCCCcHHHHHHhcccCC
Q 043188 165 ELLTKEDPDYQYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 165 ~~Ll~~g~~~~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
++|++.|++++ ..+..|.|||++|+..|+.+
T Consensus 163 ~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~ 193 (437)
T 1n11_A 163 ELLLERDAHPN-AAGKNGLTPLHVAVHHNNLD 193 (437)
T ss_dssp HHHHHTTCCTT-CCCSSCCCHHHHHHHTTCHH
T ss_pred HHHHhCCCCCC-CCCCCCCCHHHHHHHcCCHH
Confidence 99999999988 88899999999999988754
No 59
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=1.8e-29 Score=170.61 Aligned_cols=145 Identities=14% Similarity=0.028 Sum_probs=116.9
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
.+...+.++||.|+..|+.+++++|+++|.+++..+..|.||||+|+ .++.+++++|++. +.+++.++..|.|
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~---~~~~~~v~~Ll~~----g~~~~~~d~~g~t 79 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM---MGSARVAELLLLH----GAEPNCADPATLT 79 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC---TTCHHHHHHHHTT----TCCCCCCCTTTCC
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH---cCCHHHHHHHHHc----CCCCCCcCCCCCc
Confidence 45667889999999999999999999999999999999999999964 6889999999885 8899999999999
Q ss_pred -HHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCccccc
Q 043188 100 -PLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSA 178 (197)
Q Consensus 100 -~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~ 178 (197)
|||+|+..++.+++++|+++|+++.. .+..|.||||+|+..++.+++++|+++|++++ .+
T Consensus 80 tpL~~A~~~~~~~~v~~Ll~~ga~~~~------------------~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~-~~ 140 (156)
T 1bi7_B 80 RPVHDAAREGFLDTLVVLHRAGARLDV------------------RDAWGRLPVDLAEELGHRDVARYLRAAAGGTR-GS 140 (156)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCSSC------------------CCTTCCCHHHHHHHHTCHHHHHHHSSCC-------
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCCCcc------------------cCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCC-cc
Confidence 99999999999999999999999876 89999999999999999999999999999998 99
Q ss_pred ccCCCcHHHHHH
Q 043188 179 NNYGKTPLYMAA 190 (197)
Q Consensus 179 ~~~g~tpl~~A~ 190 (197)
+..|.||.+-+.
T Consensus 141 ~~~g~t~~~~~~ 152 (156)
T 1bi7_B 141 NHARIDAAEGPS 152 (156)
T ss_dssp ------------
T ss_pred CcCcCcccccCC
Confidence 999999987543
No 60
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=1.7e-28 Score=187.53 Aligned_cols=173 Identities=13% Similarity=0.127 Sum_probs=141.5
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
..+..|.||||+|+..|+.++|++|++.|.+++..+..|.||||+|+ ..|+.+++++|++... .+.+++..+..|.|
T Consensus 161 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~~~-~~~~~~~~d~~g~t 237 (373)
T 2fo1_E 161 AMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAA--ANRDFGMMVYMLNSTK-LKGDIEELDRNGMT 237 (373)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHH--HTTCHHHHHHHTTSHH-HHHTTSCCCTTSCC
T ss_pred CCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHH--HCCCHHHHHHHHhcCc-cccChhhcCCCCCC
Confidence 45678889999999999999999999999988888889999999999 9999999999887411 01567888888999
Q ss_pred HHHHHHHhC---CHHHHHHHHHcCCCCccch--------hhHHhhHH---------------HH-HHHhhccCCCCchHH
Q 043188 100 PLHVAAKFG---HSDIVRVLVERAKLPQHEN--------EELESRVG---------------AA-RQMIRMTNNEKNTAL 152 (197)
Q Consensus 100 ~l~~a~~~~---~~~~~~~ll~~~~~~~~~~--------~~~~~~~~---------------~~-~~~~~~~~~~g~t~l 152 (197)
|||+|+..+ +.+++++|++.|+++.... ..+..++. .. +.+++..|..|.|||
T Consensus 238 ~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL 317 (373)
T 2fo1_E 238 ALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPI 317 (373)
T ss_dssp HHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHH
T ss_pred HHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHH
Confidence 999998887 7888999999888776421 11111221 11 245667889999999
Q ss_pred HHHHhcCCHHHHHHHhhcCCCcccccccCCCcHHHHHHhcccCC
Q 043188 153 HEAVCHQNVDVVELLTKEDPDYQYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 153 ~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
|+|+..|+.+++++|++.|++++ .+|..|.|||++|+..|+.+
T Consensus 318 ~~A~~~g~~~iv~~Ll~~gad~~-~~d~~g~t~l~~A~~~g~~~ 360 (373)
T 2fo1_E 318 MLAAQEGRIEVVMYLIQQGASVE-AVDATDHTARQLAQANNHHN 360 (373)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSS-CCCSSSCCHHHHHHHTTCHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCcc-CCCCCCCCHHHHHHHcCCHH
Confidence 99999999999999999999998 89999999999999998754
No 61
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=9.5e-29 Score=169.44 Aligned_cols=141 Identities=17% Similarity=0.106 Sum_probs=126.5
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
..+..+.||||.|+..|+.+++++|++.|.+++..+..|.||||+|+ ..++.+++++|++. +.+++.++..|.|
T Consensus 31 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~~~~g~t 104 (172)
T 3v30_A 31 KPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLAS--TGGYTDIVGLLLER----DVDINIYDWNGGT 104 (172)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHH--HTTCHHHHHHHHTT----TCCTTCCCTTSCC
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHH--HCCCHHHHHHHHHc----CCCCCCCCCCCCC
Confidence 35678899999999999999999999999999999999999999999 99999999999885 8889999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccc
Q 043188 100 PLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSAN 179 (197)
Q Consensus 100 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (197)
|||+|+..++.+++++|++.|+++.. .+..|.||||+|+..++.+++++|+++|++.. .++
T Consensus 105 ~L~~A~~~~~~~~v~~Ll~~ga~~~~------------------~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~-~~~ 165 (172)
T 3v30_A 105 PLLYAVRGNHVKCVEALLARGADLTT------------------EADSGYTPMDLAVALGYRKVQQVIENHILKLF-QSN 165 (172)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHS-CC-
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCccc------------------cCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHh-ccc
Confidence 99999999999999999999998776 89999999999999999999999999999987 788
Q ss_pred cCCCcH
Q 043188 180 NYGKTP 185 (197)
Q Consensus 180 ~~g~tp 185 (197)
..+.||
T Consensus 166 ~~~~~p 171 (172)
T 3v30_A 166 LVPADP 171 (172)
T ss_dssp ------
T ss_pred CCCCCC
Confidence 888887
No 62
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.95 E-value=4.8e-28 Score=182.77 Aligned_cols=151 Identities=21% Similarity=0.117 Sum_probs=119.8
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHH-----------------
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEI----------------- 82 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~----------------- 82 (197)
..+..|.||||.|+..|+.+++++|++.|.+++..+..|.||||+|+ ..++.+++++|++.
T Consensus 86 ~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~ 163 (351)
T 3utm_A 86 AKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAA--SKNRVEVCSLLLSHGADPTLVNCHGKSAVDM 163 (351)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH--HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHHcCCCCccccCCCCcchHH
Confidence 45667889999999999999999999999888888888999999999 88888888887763
Q ss_pred ---------------------------------------------------------------------HHhCCcccccC
Q 043188 83 ---------------------------------------------------------------------LEKCPSLLLQV 93 (197)
Q Consensus 83 ---------------------------------------------------------------------l~~~~~~~~~~ 93 (197)
+...+.+++.+
T Consensus 164 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~ 243 (351)
T 3utm_A 164 APTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEK 243 (351)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCC
T ss_pred HhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCc
Confidence 11223444445
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCC
Q 043188 94 NAKGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPD 173 (197)
Q Consensus 94 ~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 173 (197)
+..|.||||+|+..++.+++++|++.|++++ ..+..|.||||+|+..++.+++++|++.|++
T Consensus 244 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n------------------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad 305 (351)
T 3utm_A 244 NKDFMTPLHVAAERAHNDVMEVLHKHGAKMN------------------ALDSLGQTALHRAALAGHLQTCRLLLSYGSD 305 (351)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT------------------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC------------------CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 5555555555555555555555555555544 4899999999999999999999999999999
Q ss_pred cccccccCCCcHHHHHHh
Q 043188 174 YQYSANNYGKTPLYMAAD 191 (197)
Q Consensus 174 ~~~~~~~~g~tpl~~A~~ 191 (197)
++ .+|..|.||+++|..
T Consensus 306 ~~-~~~~~g~tal~~a~~ 322 (351)
T 3utm_A 306 PS-IISLQGFTAAQMGNE 322 (351)
T ss_dssp TT-CCCTTSCCHHHHSCH
T ss_pred CC-CcCCCCCChhhhhhH
Confidence 98 999999999999844
No 63
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.95 E-value=1.5e-28 Score=180.47 Aligned_cols=148 Identities=17% Similarity=0.151 Sum_probs=136.8
Q ss_pred cCCHHHHHHHHcCCcHHHHHHHHHHHHHhcc-cccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHH
Q 043188 24 QIDPNLFKAAAAGNLEPFKDMAREVIERLLT-AKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLH 102 (197)
Q Consensus 24 ~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~-~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~ 102 (197)
++.++|+.|+..|+.+.+++|++.|.+++.. +..|.||||+|+ ..|+.+++++|++. +.+++.++..|.||||
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~ 77 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAV--QMSREDIVELLLRH----GADPVLRKKNGATPFL 77 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHH--HTTCHHHHHHHHHT----TCCTTCCCTTCCCHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHH--HcCCHHHHHHHHHc----CCCCcccCCCCCCHHH
Confidence 4678999999999999999999999988855 788999999999 99999999999986 8889999999999999
Q ss_pred HHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCccccc----
Q 043188 103 VAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSA---- 178 (197)
Q Consensus 103 ~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~---- 178 (197)
+|+..++.+++++|++.|+++.. .+..|.||||+|+..++.+++++|++.|++++ ..
T Consensus 78 ~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~~ 138 (285)
T 1wdy_A 78 LAAIAGSVKLLKLFLSKGADVNE------------------CDFYGFTAFMEAAVYGKVKALKFLYKRGANVN-LRRKTK 138 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTC------------------BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTT-CCCCCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCc------------------cCcccCCHHHHHHHhCCHHHHHHHHHhCCCcc-cccccH
Confidence 99999999999999999998775 88999999999999999999999999999987 55
Q ss_pred ------ccCCCcHHHHHHhcccCC
Q 043188 179 ------NNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 179 ------~~~g~tpl~~A~~~~~~~ 196 (197)
+..|.||||+|+..|+.+
T Consensus 139 ~~~~~~~~~g~t~L~~A~~~~~~~ 162 (285)
T 1wdy_A 139 EDQERLRKGGATALMDAAEKGHVE 162 (285)
T ss_dssp HHHHHTTCCCCCHHHHHHHHTCHH
T ss_pred HHHHhhccCCCcHHHHHHHcCCHH
Confidence 778999999999988753
No 64
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=1.1e-27 Score=155.71 Aligned_cols=126 Identities=26% Similarity=0.305 Sum_probs=119.1
Q ss_pred cCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHH
Q 043188 24 QIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHV 103 (197)
Q Consensus 24 ~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~ 103 (197)
.|.|+|+.|+..|+.+++++|++.|.+++..+..|.||||+|+ ..++.+++++|++. +.+++.++..|.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~--~~~~~~~~~~Ll~~----g~~~~~~~~~g~t~l~~ 74 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAA--RNGHLEVVKLLLEA----GADVNAKDKNGRTPLHL 74 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHH--HHTCHHHHHHHHHT----TCCTTCCCTTSCCHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHH--HcCcHHHHHHHHHc----CCCCcccCCCCCcHHHH
Confidence 3788999999999999999999999998888999999999999 99999999999885 88899999999999999
Q ss_pred HHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCC
Q 043188 104 AAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPD 173 (197)
Q Consensus 104 a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 173 (197)
|+..++.+++++|++.++++.. .+..|.||||+|+..++.+++++|++.|++
T Consensus 75 A~~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 75 AARNGHLEVVKLLLEAGADVNA------------------KDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHcChHHHHHHHHHcCCCCcc------------------cCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999998765 889999999999999999999999999986
No 65
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.95 E-value=5.1e-28 Score=159.78 Aligned_cols=127 Identities=23% Similarity=0.229 Sum_probs=117.8
Q ss_pred ccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcH
Q 043188 21 SQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTP 100 (197)
Q Consensus 21 ~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~ 100 (197)
....+.++||+|+..|+.+++++|++.|.+++..+..|.||||+|+ ..++.+++++|++. +.+++.++..|.||
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~d~~g~t~ 83 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLAT--AHGHLEIVEVLLKN----GADVNAVDAIGFTP 83 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HHTCHHHHHHHHHT----TCCTTCCCTTCCCH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH--HcCCHHHHHHHHHc----CCCCCcCCCCCCCH
Confidence 4556789999999999999999999999999989999999999999 99999999999985 88899999999999
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcC
Q 043188 101 LHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKED 171 (197)
Q Consensus 101 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 171 (197)
||+|+..++.+++++|++.|+++.. .+..|.||||+|+..++.+++++|++.|
T Consensus 84 L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 84 LHLAAFIGHLEIAEVLLKHGADVNA------------------QDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcC------------------cCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999998776 8999999999999999999999999876
No 66
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=5.2e-29 Score=172.91 Aligned_cols=144 Identities=12% Similarity=0.111 Sum_probs=125.1
Q ss_pred CCHHHHHHHHcCCcHHHHHHHHHHHHHhccc-ccCCcHHHHHHHhhhccc----ccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 25 IDPNLFKAAAAGNLEPFKDMAREVIERLLTA-KTKNTILHINIISQEREN----VSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 25 ~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~lh~a~~~~~~~~----~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
+.++|+.|++.|+++.++.++..+. +..+ ..|.||||+|+ ..++. +++++|++. |++++.++..|.|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~--~~~~~~~~~~iv~~Ll~~----Gadvn~~d~~g~T 77 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVL--RNNNDEARYKISMFLINK----GADIKSRTKEGTT 77 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHT--TCSCHHHHHHHHHHHHHT----TCCSSCCCTTCCC
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHH--HcCCcchHHHHHHHHHHC----CCCCCCCCCCCCc
Confidence 3467999999999999999998664 3344 68999999999 87764 467777774 9999999999999
Q ss_pred HHHHHHHhCC------HHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCc-hHHHHHHhcC-----CHHHHHHH
Q 043188 100 PLHVAAKFGH------SDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKN-TALHEAVCHQ-----NVDVVELL 167 (197)
Q Consensus 100 ~l~~a~~~~~------~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-t~l~~a~~~~-----~~~~~~~L 167 (197)
|||+|+..++ .+++++|+++|++++. .|..|. ||||+|+..+ ..+++++|
T Consensus 78 pLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~------------------~d~~g~ttpLh~A~~~~~~~~~~~~iv~~L 139 (186)
T 3t8k_A 78 LFFPLFQGGGNDITGTTELCKIFLEKGADITA------------------LYKPYKIVVFKNIFNYFVDENEMIPLYKLI 139 (186)
T ss_dssp THHHHHHHCTTCHHHHHHHHHHHHHTTCCSSS------------------CBGGGTBCTTGGGGGCCSCHHHHHHHHHHH
T ss_pred HHHHHHHcCCcchhhHHHHHHHHHHCCCCCCc------------------cCCCcCchHHHHHHHcCCChhhHHHHHHHH
Confidence 9999999987 4789999999999887 899999 9999999844 45799999
Q ss_pred hh-cCCCcccccccCCCcHHHHHHhcccC
Q 043188 168 TK-EDPDYQYSANNYGKTPLYMAADYRSS 195 (197)
Q Consensus 168 l~-~g~~~~~~~~~~g~tpl~~A~~~~~~ 195 (197)
++ .|++++ .+|..|.||||+|++.|+.
T Consensus 140 l~~~gad~~-~~d~~G~TpL~~A~~~~~~ 167 (186)
T 3t8k_A 140 FSQSGLQLL-IKDKWGLTALEFVKRCQKP 167 (186)
T ss_dssp HTSTTCCTT-CCCTTSCCHHHHHHTTTCH
T ss_pred HHhcCCCCc-ccCCCCCCHHHHHHHcCCH
Confidence 99 999998 9999999999999998864
No 67
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.95 E-value=2.3e-27 Score=170.19 Aligned_cols=149 Identities=21% Similarity=0.239 Sum_probs=122.9
Q ss_pred ccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccC-CCCCCc
Q 043188 21 SQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQV-NAKGDT 99 (197)
Q Consensus 21 ~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~t 99 (197)
.++.+.++|+.|+..|+.+.+++|++.|.+++..+..|.||||+|+ ..|+.+++++|++. +...+.. +..|.|
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----~~~~~~~~~~~~~t 78 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAA--INNRIDLVKYYISK----GAIVDQLGGDLNST 78 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHT----TCCTTCCBTTTTBC
T ss_pred cccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHH--HhCCHHHHHHHHHc----CCcchhhcCCcCCC
Confidence 3556778999999999999999999999998888999999999999 99999999999985 5555544 455999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccc
Q 043188 100 PLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSAN 179 (197)
Q Consensus 100 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~ 179 (197)
|||+|+..++.+++++|++.++++.. .+..|.||||+|+..++.+++++|++.|+++. .++
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~-~~~ 139 (240)
T 3eu9_A 79 PLHWATRQGHLSMVVQLMKYGADPSL------------------IDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVD-MMD 139 (240)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCC
T ss_pred hhHHHHHcCCHHHHHHHHHcCCCCcc------------------cCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcc-ccC
Confidence 99999999999999999999998776 66667777777777777777777777777766 666
Q ss_pred cCCCcHHHHHHhccc
Q 043188 180 NYGKTPLYMAADYRS 194 (197)
Q Consensus 180 ~~g~tpl~~A~~~~~ 194 (197)
..|.|||++|+..+.
T Consensus 140 ~~g~t~l~~a~~~~~ 154 (240)
T 3eu9_A 140 QNGMTPLMWAAYRTH 154 (240)
T ss_dssp TTSCCHHHHHHHHCC
T ss_pred CCCCcHHHHHHHhCC
Confidence 667777777765544
No 68
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=1.6e-27 Score=173.49 Aligned_cols=153 Identities=21% Similarity=0.242 Sum_probs=128.1
Q ss_pred ccCCHHHHHHHHcCCcHHHHHHHH----HHHHHhccc----ccCCcHHHHHHHh-hhcccccHHHHHHHHHhC-------
Q 043188 23 SQIDPNLFKAAAAGNLEPFKDMAR----EVIERLLTA----KTKNTILHINIIS-QERENVSTKFVAEILEKC------- 86 (197)
Q Consensus 23 ~~~~~~l~~a~~~g~~~~v~~Ll~----~g~~~~~~~----~~g~t~lh~a~~~-~~~~~~~~~~l~~~l~~~------- 86 (197)
..+.++|+.|+..|+.+.++.|++ .|.+++..+ ..|.||||+|+.. +.|+.+++++|++.....
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 82 (260)
T 3jxi_A 3 VFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFI 82 (260)
T ss_dssp CCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHH
T ss_pred cchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhh
Confidence 356789999999999997666666 777776444 6699999999832 359999999999973221
Q ss_pred CcccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccC--------------CCCchHH
Q 043188 87 PSLLLQVNAKGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTN--------------NEKNTAL 152 (197)
Q Consensus 87 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~g~t~l 152 (197)
....+..+..|.||||+|+..++.+++++|++.|++++. .+ ..|.|||
T Consensus 83 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------------------~~~~~~~~~~~~~~~~~~g~tpL 144 (260)
T 3jxi_A 83 NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHA------------------QARGRFFQPKDEGGYFYFGELPL 144 (260)
T ss_dssp TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCEECCCSSSCCCCSCCSCSSHH
T ss_pred cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCc------------------cccccccCcccccccccCCCCHH
Confidence 123444566899999999999999999999999999876 55 6899999
Q ss_pred HHHHhcCCHHHHHHHhh---cCCCcccccccCCCcHHHHHHhccc
Q 043188 153 HEAVCHQNVDVVELLTK---EDPDYQYSANNYGKTPLYMAADYRS 194 (197)
Q Consensus 153 ~~a~~~~~~~~~~~Ll~---~g~~~~~~~~~~g~tpl~~A~~~~~ 194 (197)
|+|+..|+.+++++|++ .|++++ .+|..|.||||+|+..++
T Consensus 145 ~~A~~~g~~~~v~~Ll~~~~~ga~~~-~~d~~g~TpLh~A~~~~~ 188 (260)
T 3jxi_A 145 SLAACTNQPHIVHYLTENGHKQADLR-RQDSRGNTVLHALVAIAD 188 (260)
T ss_dssp HHHHHTTCHHHHHHHHHCSSCCCCTT-CCCTTSCCHHHHHHHHCC
T ss_pred HHHHHcCCHHHHHHHHhccccCCCCc-ccCCCCCcHHHHHHHhcc
Confidence 99999999999999999 999998 999999999999997665
No 69
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.95 E-value=3.3e-28 Score=185.94 Aligned_cols=150 Identities=17% Similarity=0.131 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHHHHHhCCHHHHHHHHHc
Q 043188 40 PFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHVAAKFGHSDIVRVLVER 119 (197)
Q Consensus 40 ~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~ 119 (197)
.++.|++.|.+++..|..|.||||+|+ ..|+.+++++|++. +++++.++..|.||||+|+..++.+++++|++.
T Consensus 148 ~~~~ll~~ga~vn~~d~~g~TpL~~A~--~~g~~~iv~~Ll~~----ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 221 (373)
T 2fo1_E 148 EAKECIAAGADVNAMDCDENTPLMLAV--LARRRRLVAYLMKA----GADPTIYNKSERSALHQAAANRDFGMMVYMLNS 221 (373)
T ss_dssp HHHHHHHTCCCTTCCCTTSCCHHHHHH--HHTCHHHHHHHHHT----TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTS
T ss_pred HHHHHHhcCCCCcCCCCCCCCHHHHHH--HcChHHHHHHHHHC----CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhc
Confidence 357788999999999999999999999 99999999999986 889999999999999999999999999999987
Q ss_pred C---CCCccchhhHHhhHHH------------------HHHHhh--------ccCCCCchHHHHHHhcCCHHHHHHHhhc
Q 043188 120 A---KLPQHENEELESRVGA------------------ARQMIR--------MTNNEKNTALHEAVCHQNVDVVELLTKE 170 (197)
Q Consensus 120 ~---~~~~~~~~~~~~~~~~------------------~~~~~~--------~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 170 (197)
+ .++...+..+..++.. .+..++ ..+..|.||||+|+..|+.+++++|++.
T Consensus 222 ~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ 301 (373)
T 2fo1_E 222 TKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGE 301 (373)
T ss_dssp HHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHH
T ss_pred CccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHh
Confidence 6 4555444333222221 112222 2466899999999999999999999987
Q ss_pred C-CCcccccccCCCcHHHHHHhcccCC
Q 043188 171 D-PDYQYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 171 g-~~~~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
+ ++++ .+|..|.||||+|+..|+.+
T Consensus 302 ~~~~~n-~~d~~g~TpL~~A~~~g~~~ 327 (373)
T 2fo1_E 302 KGSNKD-KQDEDGKTPIMLAAQEGRIE 327 (373)
T ss_dssp SCCCTT-CCCTTCCCHHHHHHHHTCHH
T ss_pred cCCCcc-CcCCCCCCHHHHHHHcCCHH
Confidence 6 8888 99999999999999998754
No 70
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=3e-27 Score=160.33 Aligned_cols=129 Identities=22% Similarity=0.191 Sum_probs=119.3
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
..+..+.||||.|+. |+.+++++|++.|.+++.++..|.||||+|+ ..++.+++++|++. +.+++.++..|.|
T Consensus 33 ~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~~~~g~t 105 (162)
T 1ihb_A 33 AQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAA--RAGFLDTLQTLLEF----QADVNIEDNEGNL 105 (162)
T ss_dssp CCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HHTCHHHHHHHHHT----TCCTTCCCTTSCC
T ss_pred ccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHHc----CCCCCCcCCCCCC
Confidence 456789999999999 9999999999999999999999999999999 99999999999986 8889999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCC-ccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCC
Q 043188 100 PLHVAAKFGHSDIVRVLVERAKLP-QHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPD 173 (197)
Q Consensus 100 ~l~~a~~~~~~~~~~~ll~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 173 (197)
|||+|+..++.+++++|++.+++. .. .+..|.||||+|+..++.+++++|+++|++
T Consensus 106 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~------------------~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 106 PLHLAAKEGHLRVVEFLVKHTASNVGH------------------RNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHHHHcCCHHHHHHHHHccCCCCCC------------------cCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 999999999999999999999874 43 889999999999999999999999999985
No 71
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.94 E-value=1.5e-27 Score=177.28 Aligned_cols=140 Identities=20% Similarity=0.208 Sum_probs=121.9
Q ss_pred CCHHHHHHHHcCCcHHHHHHHHHHHHHhc------ccccCCcHHHHHHHhhh---cccccHHHHHHHHHhCCcccccCCC
Q 043188 25 IDPNLFKAAAAGNLEPFKDMAREVIERLL------TAKTKNTILHINIISQE---RENVSTKFVAEILEKCPSLLLQVNA 95 (197)
Q Consensus 25 ~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~------~~~~g~t~lh~a~~~~~---~~~~~~~~l~~~l~~~~~~~~~~~~ 95 (197)
..++|+.|+..|+++.++.|++.|.+++. .+..|.||||+|+ .. ++.+++++|++. +++++.++.
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~--~~~~~~~~~iv~~Ll~~----gadvn~~d~ 224 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAV--KVANQASLPLVDFIIQN----GGHLDAKAA 224 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHH--HTCCTTTHHHHHHHHHH----SSCTTCCCT
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHH--HhcccCcHHHHHHHHhc----CCCCCCCCC
Confidence 34679999999999999999999998886 6889999999999 76 788999999987 889999999
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcc
Q 043188 96 KGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQ 175 (197)
Q Consensus 96 ~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~ 175 (197)
.|.||||+|+..++.+++++|++.|+++.. .|..|.||||+|+..++.+++++|++.|++
T Consensus 225 ~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~------------------~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-- 284 (301)
T 2b0o_E 225 DGNTALHYAALYNQPDCLKLLLKGRALVGT------------------VNEAGETALDIARKKHHKECEELLEQAQAG-- 284 (301)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCCSC------------------CCTTSCCHHHHHHHHTCHHHHHHHHHHHHH--
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHcCCHHHHHHHHHhcCC--
Confidence 999999999999999999999999999876 899999999999999999999999988765
Q ss_pred cccccCCCcHHHHHHhcccC
Q 043188 176 YSANNYGKTPLYMAADYRSS 195 (197)
Q Consensus 176 ~~~~~~g~tpl~~A~~~~~~ 195 (197)
.|.||||+|+..|+.
T Consensus 285 -----~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 285 -----TFAFPLHVDYSWVIS 299 (301)
T ss_dssp -----TTSSCCC--------
T ss_pred -----CCCChhHHHHhcCCc
Confidence 478999999999874
No 72
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.94 E-value=1e-26 Score=175.27 Aligned_cols=151 Identities=19% Similarity=0.165 Sum_probs=130.5
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHH-HHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCC
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMARE-VIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGD 98 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 98 (197)
..+..|.||||+|+..|+.++|+.|+++ |.+++.++..|.|++|+++ ..+....+..++++|.+.+++++.++..|.
T Consensus 163 ~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~--~~~~~~~~~~i~~lLl~~gad~n~~d~~g~ 240 (337)
T 4g8k_A 163 RLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHAL--LSSDDSDVEAITHLLLDHGADVNVRGERGK 240 (337)
T ss_dssp -CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHH--HHSCTTTHHHHHHHHHHTTCCTTCCCGGGC
T ss_pred cccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHH--HHcCcccHHHHHHHHHHCCCCCCCcCCCCC
Confidence 3455788999999999999999999975 8889999999999999998 776665555555555556999999999999
Q ss_pred cHHHHHHHhCCHHHHHHHHHc-CCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccc
Q 043188 99 TPLHVAAKFGHSDIVRVLVER-AKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYS 177 (197)
Q Consensus 99 t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~ 177 (197)
||||+|+..++.+++++|+.. +.+++. .|..|+||||+|+..|+.+++++|+++|++++ .
T Consensus 241 t~L~~a~~~~~~~~v~~Ll~~~~~~vn~------------------~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n-~ 301 (337)
T 4g8k_A 241 TPLILAVEKKHLGLVQRLLEQEHIEIND------------------TDSDGKTALLLAVELKLKKIAELLCKRGASTD-C 301 (337)
T ss_dssp CHHHHHHHTTCHHHHHHHHTSTTCCTTC------------------BCTTSCBHHHHHHHTTCHHHHHHHHTTSCSST-T
T ss_pred CHHHHHHHhhhhHHHHHHHHhcCCcccC------------------cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-C
Confidence 999999999999999999985 667665 89999999999999999999999999999986 4
Q ss_pred cccCCCcHHHHHHhcccCC
Q 043188 178 ANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 178 ~~~~g~tpl~~A~~~~~~~ 196 (197)
.+||++|++.|+.+
T Consensus 302 -----~~~L~~A~~~~~~~ 315 (337)
T 4g8k_A 302 -----GDLVMTARRNYDHS 315 (337)
T ss_dssp -----CCHHHHHHHTTCHH
T ss_pred -----CCHHHHHHHcCCHH
Confidence 46999999998754
No 73
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=1.8e-26 Score=157.78 Aligned_cols=128 Identities=23% Similarity=0.213 Sum_probs=119.8
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
..+..+.|+||.|+..|+.+++++|++.|.+++..+..|.||||+|+ ..++.+++++|++. +.+++.++..|.|
T Consensus 42 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~~~~Ll~~----g~~~~~~~~~g~t 115 (169)
T 2y1l_E 42 AEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAA--LFGHLEIVEVLLKN----GADVNANDMEGHT 115 (169)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHT----TCCTTCCCTTSCC
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH--HcCCHHHHHHHHHc----CCCCCCCCCCCCC
Confidence 45668899999999999999999999999999889999999999999 99999999999986 8889999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcC
Q 043188 100 PLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKED 171 (197)
Q Consensus 100 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 171 (197)
|||+|+..++.+++++|++.|+++.. .+..|.||||+|+..++.+++++|++.|
T Consensus 116 ~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 116 PLHLAAMFGHLEIVEVLLKNGADVNA------------------QDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 99999999999999999999998776 8999999999999999999999999875
No 74
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=7.1e-27 Score=161.15 Aligned_cols=137 Identities=15% Similarity=0.120 Sum_probs=127.5
Q ss_pred ccccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCC
Q 043188 19 EISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGD 98 (197)
Q Consensus 19 ~~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 98 (197)
...+..+.||||.|+..|+.+++++|++.|.+++..+..|.||||+|+ ..++.+++++|++. +.+++.++..|.
T Consensus 33 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~d~~g~ 106 (179)
T 3f6q_A 33 NQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAA--SHGHRDIVQKLLQY----KADINAVNEHGN 106 (179)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH--HTTCHHHHHHHHHT----TCCTTCCCTTSC
T ss_pred cccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHH--HcCCHHHHHHHHHc----CCCCCccCCCCC
Confidence 356678899999999999999999999999999999999999999999 99999999999986 899999999999
Q ss_pred cHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCccccc
Q 043188 99 TPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSA 178 (197)
Q Consensus 99 t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~ 178 (197)
||||+|+..++.+++++|++.|+++.. .+..|.|||++|+..++.+++++|++.|++++ ..
T Consensus 107 t~L~~A~~~~~~~~v~~Ll~~ga~~~~------------------~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~-~~ 167 (179)
T 3f6q_A 107 VPLHYACFWGQDQVAEDLVANGALVSI------------------CNKYGEMPVDKAKAPLRELLRERAEKMGQNLN-RI 167 (179)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCSSB------------------CCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCS-CB
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCcch------------------hccCCCCcHHHHHHHHHHHHHHHHHHhhcCcc-cC
Confidence 999999999999999999999999876 89999999999999999999999999999987 44
Q ss_pred cc
Q 043188 179 NN 180 (197)
Q Consensus 179 ~~ 180 (197)
+.
T Consensus 168 ~~ 169 (179)
T 3f6q_A 168 PY 169 (179)
T ss_dssp CC
T ss_pred Cc
Confidence 33
No 75
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=2.9e-27 Score=173.83 Aligned_cols=146 Identities=20% Similarity=0.251 Sum_probs=132.9
Q ss_pred CHHHHHHHHcCCcHHHHHHHHHHHH--HhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCc-ccccCCCCCCcHHH
Q 043188 26 DPNLFKAAAAGNLEPFKDMAREVIE--RLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPS-LLLQVNAKGDTPLH 102 (197)
Q Consensus 26 ~~~l~~a~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~~t~l~ 102 (197)
.++++.|+..|+++.++.+++.+.+ ++..|..|.||||+|+ ..|+.+++++|++. +. +++.++..|.||||
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~--~~g~~~~v~~Ll~~----g~~~~~~~~~~g~tpL~ 150 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSV--SHANFPVVQQLLDS----GVCKVDKQNRAGYSPIM 150 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHH--HTTCHHHHHHHHHT----SCCCTTCCCTTSCCHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHH--HCCCHHHHHHHHHC----CCCcCCCCCCCCCCHHH
Confidence 4457889999999999999998777 6689999999999999 99999999999986 65 89999999999999
Q ss_pred HHH-----HhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccc
Q 043188 103 VAA-----KFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYS 177 (197)
Q Consensus 103 ~a~-----~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~ 177 (197)
+|+ ..++.+++++|++.|..... .+..|.||||+|+..|+.+++++|++.|++++ .
T Consensus 151 ~a~~~~~~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n-~ 211 (276)
T 4hbd_A 151 LTALATLKTQDDIETVLQLFRLGNINAK------------------ASQAGQTALMLAVSHGRVDVVKALLACEADVN-V 211 (276)
T ss_dssp HGGGCCCCSHHHHHHHHHHHHHSCTTCC------------------CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-C
T ss_pred HHHHHHhhhhhhHHHHHHHHHcCCCccc------------------cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-C
Confidence 999 66888999999999987665 78899999999999999999999999999998 9
Q ss_pred cccCCCcHHHHHHhcccCC
Q 043188 178 ANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 178 ~~~~g~tpl~~A~~~~~~~ 196 (197)
+|..|.||||+|+..|+.+
T Consensus 212 ~d~~G~TpLh~A~~~g~~~ 230 (276)
T 4hbd_A 212 QDDDGSTALMCACEHGHKE 230 (276)
T ss_dssp CCTTSCCHHHHHHHHTCHH
T ss_pred CCCCCCCHHHHHHHCCCHH
Confidence 9999999999999998754
No 76
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=1.8e-27 Score=157.15 Aligned_cols=121 Identities=13% Similarity=0.225 Sum_probs=112.3
Q ss_pred HHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhh
Q 043188 50 ERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEE 129 (197)
Q Consensus 50 ~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~ 129 (197)
+++..+..|.||||+|+ ..++.+++++|++. +.+++.++..|.||||+|+. ++.+++++|++.++++..
T Consensus 4 ~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~---- 72 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAA--ARGQVETVRQLLEA----GADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNC---- 72 (136)
T ss_dssp CCSCCCCCCSCHHHHHH--HTTCHHHHHHHHHT----TCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSC----
T ss_pred CccCCCCCCccHHHHHH--HcCCHHHHHHHHHc----CCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCC----
Confidence 34567889999999999 99999999999986 88899999999999999999 999999999999999876
Q ss_pred HHhhHHHHHHHhhccCCC-CchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCCcHHHHHHhcccCC
Q 043188 130 LESRVGAARQMIRMTNNE-KNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
.+.. |.||||+|+..++.+++++|++.|++++ .++..|.|||++|+..++.+
T Consensus 73 --------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~ 125 (136)
T 1d9s_A 73 --------------ADPATLTRPVHDAAREGFLDTLVVLHRAGARLD-VCDAWGRLPVDLAEEQGHRD 125 (136)
T ss_dssp --------------CBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCC-CCSSSSSCHHHHHHHHTCHH
T ss_pred --------------cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHH
Confidence 8888 9999999999999999999999999998 99999999999999988754
No 77
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=9.8e-27 Score=158.34 Aligned_cols=128 Identities=18% Similarity=0.163 Sum_probs=118.2
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
..+..+.||||.|+..|+.+++++|++.|.+++..+..|.||||+|+ ..++.+++++|++. +.+++.++..|.|
T Consensus 37 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~~~~g~t 110 (165)
T 3twr_A 37 DIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNAC--SYGHYEVAELLVKH----GAVVNVADLWKFT 110 (165)
T ss_dssp CTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHT----TCCTTCCCTTCCC
T ss_pred ccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHH--HcCcHHHHHHHHhC----CCCCCCcCCCCCC
Confidence 45567789999999999999999999999999999999999999999 99999999999986 8899999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCC
Q 043188 100 PLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDP 172 (197)
Q Consensus 100 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~ 172 (197)
|||+|+..++.+++++|++.|+++.. .+..|.||+|+|+. ++.+++++|++.|+
T Consensus 111 ~L~~A~~~~~~~~v~~Ll~~ga~~~~------------------~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 111 PLHEAAAKGKYEICKLLLQHGADPTK------------------KNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcc------------------cCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 99999999999999999999998776 89999999999876 89999999998875
No 78
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=3.6e-27 Score=155.85 Aligned_cols=116 Identities=27% Similarity=0.373 Sum_probs=66.4
Q ss_pred cccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHh
Q 043188 53 LTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELES 132 (197)
Q Consensus 53 ~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 132 (197)
.++..|.||||+|+ ..|+.+++++|++. +.+++.++..|.||||+|+..++.+++++|++.++++..
T Consensus 5 ~~~~~g~t~L~~A~--~~~~~~~~~~Ll~~----g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------- 71 (137)
T 3c5r_A 5 FTNHRGETLLHIAS--IKGDIPSVEYLLQN----GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT------- 71 (137)
T ss_dssp CCCTTCCCHHHHHH--HHTCHHHHHHHHHT----TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------
T ss_pred CcCCCCCCHHHHHH--HcCCHHHHHHHHHc----CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC-------
Confidence 34555556666666 55555555555553 555555555556666666666666666666655555443
Q ss_pred hHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCCcHHHHHHhcc
Q 043188 133 RVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKTPLYMAADYR 193 (197)
Q Consensus 133 ~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~tpl~~A~~~~ 193 (197)
.+..|.||||+|+..++.+++++|++.|++++ .+|..|.||+++|+..+
T Consensus 72 -----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~tpl~~A~~~~ 120 (137)
T 3c5r_A 72 -----------TGYQNDSPLHDAAKNGHVDIVKLLLSYGASRN-AVNIFGLRPVDYTDDES 120 (137)
T ss_dssp -----------CCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCGGGGCCCHH
T ss_pred -----------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHhhcc
Confidence 55555566666666666666666665565555 55555666665555443
No 79
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=3.3e-26 Score=159.48 Aligned_cols=128 Identities=21% Similarity=0.142 Sum_probs=120.1
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
..+..+.||||+|+..|+.+++++|++.|.+++..+..|.||||+|+ ..++.+++++|++. +.+++.++..|.|
T Consensus 63 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~~~~g~t 136 (192)
T 2rfm_A 63 DKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSI--IFGYSEMSYFLLEH----GANVNDRNLEGET 136 (192)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHH--HHTCHHHHHHHHHT----TCCSSCCCTTCCC
T ss_pred cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH--HcCCHHHHHHHHHC----CCCCCCCCCCCCC
Confidence 45567899999999999999999999999999989999999999999 99999999999986 8899999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcC
Q 043188 100 PLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKED 171 (197)
Q Consensus 100 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g 171 (197)
|||+|+..++.+++++|++.|+++.. .+..|.||||+|+..++.+++++|++.|
T Consensus 137 ~L~~A~~~~~~~~v~~Ll~~ga~~~~------------------~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 137 PLIVASKYGRSEIVKKLLELGADISA------------------RDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTC------------------BCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCC------------------cCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 99999999999999999999998776 8999999999999999999999999754
No 80
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=2.3e-26 Score=156.82 Aligned_cols=131 Identities=17% Similarity=0.150 Sum_probs=122.9
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
..+..+.||||.|+..|+.+++++|++.|.+++..+..|.||||+|+ ..++.+++++|++. +.+++.++..|.|
T Consensus 31 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~~~~g~t 104 (167)
T 3v31_A 31 HTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLAC--SKGYTDIVKMLLDC----GVDVNEYDWNGGT 104 (167)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH--HHTCHHHHHHHHHH----TCCTTCCCTTSCC
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHH--HcCCHHHHHHHHHC----CCCCCcCCCCCCC
Confidence 45678899999999999999999999999999988999999999999 99999999999997 8889999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCc
Q 043188 100 PLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDY 174 (197)
Q Consensus 100 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~ 174 (197)
|||+|+..++.+++++|++.|+++.. .+..|.||||+|+..++.+++++|++++.+.
T Consensus 105 ~L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 105 PLLYAVHGNHVKCVKMLLESGADPTI------------------ETDSGYNSMDLAVALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 99999999999999999999998776 8999999999999999999999999887654
No 81
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=3.8e-26 Score=153.65 Aligned_cols=123 Identities=20% Similarity=0.182 Sum_probs=116.2
Q ss_pred ccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcH
Q 043188 21 SQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTP 100 (197)
Q Consensus 21 ~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~ 100 (197)
.+..+.||||.|+..|+.+++++|++.|.+++..+..|.||||+|+ ..++.+++++|++. +.+++.++..|.||
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~ 103 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAA--SEGHANIVEVLLKH----GADVNAKDMLKMTA 103 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHH--HHTCHHHHHHHHTT----TCCTTCCCTTSCCH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH--HcChHHHHHHHHHc----CCCCCCCCCCCCCH
Confidence 4667899999999999999999999999999989999999999999 99999999999885 88899999999999
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHH
Q 043188 101 LHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELL 167 (197)
Q Consensus 101 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 167 (197)
||+|+..++.+++++|++.|+++.. .+..|.||||+|+..|+.+++++|
T Consensus 104 L~~A~~~~~~~~v~~Ll~~ga~~~~------------------~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 104 LHWATEHNHQEVVELLIKYGADVHT------------------QSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccc------------------cCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999999999998776 899999999999999999999987
No 82
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=1.7e-27 Score=171.55 Aligned_cols=147 Identities=16% Similarity=0.129 Sum_probs=130.4
Q ss_pred ccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHH
Q 043188 23 SQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLH 102 (197)
Q Consensus 23 ~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~ 102 (197)
+.+.|+||.|+..|+.++++.|++.|.+++.+|..|.||||+|+ ..|+.+++++|++. +.+++.++..|.||||
T Consensus 35 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~--~~g~~~~v~~Ll~~----ga~~~~~d~~g~tpL~ 108 (239)
T 1ycs_B 35 PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAV--CAGHTEIVKFLVQF----GVNVNAADSDGWTPLH 108 (239)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHH--HHTCHHHHHHHHHH----TCCTTCCCTTCCCHHH
T ss_pred chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH--HcCCHHHHHHHHHc----CCCCCccCCCCCCHHH
Confidence 56789999999999999999999999999999999999999999 99999999999997 8999999999999999
Q ss_pred HHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCc-hHHHHH--HhcCCHHHHHHHhhcCCCccccc-
Q 043188 103 VAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKN-TALHEA--VCHQNVDVVELLTKEDPDYQYSA- 178 (197)
Q Consensus 103 ~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-t~l~~a--~~~~~~~~~~~Ll~~g~~~~~~~- 178 (197)
+|+..++.+++++|+++|+++.. .+..+. ||||+| +..|+.+++++|++.|++++ ..
T Consensus 109 ~A~~~~~~~~v~~Ll~~ga~~~~------------------~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~-~~~ 169 (239)
T 1ycs_B 109 CAASCNNVQVCKFLVESGAAVFA------------------MTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMG-IMN 169 (239)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTC------------------CCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTT-TTG
T ss_pred HHHHcCCHHHHHHHHHcCCCcce------------------ecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccc-ccc
Confidence 99999999999999999999876 666666 999999 78899999999999988876 43
Q ss_pred --------ccCCCcHHHHHHhccc
Q 043188 179 --------NNYGKTPLYMAADYRS 194 (197)
Q Consensus 179 --------~~~g~tpl~~A~~~~~ 194 (197)
+..+.+|.+++...|.
T Consensus 170 ~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 170 KGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp GGEEEESSCBCCSSTTBCCBCSSC
T ss_pred cceEEEEeccCCCCCCcccccCCC
Confidence 5567787777666553
No 83
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=7e-26 Score=149.46 Aligned_cols=118 Identities=19% Similarity=0.254 Sum_probs=109.3
Q ss_pred ccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhh
Q 043188 54 TAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESR 133 (197)
Q Consensus 54 ~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 133 (197)
....+.||||+|+ ..|+.+++++|++. +.+++.++..|.||||+|+..++.+++++|++.+++++.
T Consensus 10 ~~~~~~t~l~~A~--~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-------- 75 (136)
T 2jab_A 10 HGSDLGKKLLEAA--RAGQDDEVRILMAN----GADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNA-------- 75 (136)
T ss_dssp --CHHHHHHHHHH--HHTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC--------
T ss_pred ccccccHHHHHHH--HhCCHHHHHHHHHc----CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc--------
Confidence 4567899999999 99999999999986 888999999999999999999999999999999998776
Q ss_pred HHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCCcHHHHHHhcccCC
Q 043188 134 VGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 134 ~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
.+..|.||||+|+..++.+++++|++.|++++ .+|..|.|||++|+..|+.+
T Consensus 76 ----------~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~tpl~~A~~~~~~~ 127 (136)
T 2jab_A 76 ----------VDAIGFTPLHLAAFIGHLEIAEVLLKHGADVN-AQDKFGKTAFDISIGNGNED 127 (136)
T ss_dssp ----------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHH
T ss_pred ----------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-CcCCCCCCHHHHHHHCCCHH
Confidence 88899999999999999999999999999988 89999999999999998754
No 84
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=1.1e-25 Score=151.67 Aligned_cols=128 Identities=15% Similarity=0.130 Sum_probs=118.1
Q ss_pred CcccccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCC
Q 043188 17 NGEISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAK 96 (197)
Q Consensus 17 ~~~~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 96 (197)
+....+..+.||||. +..|+.+++++|++.|.+++.++..|.||||+|+ ..|+.+++++|++. +.+++.++..
T Consensus 28 ~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~~~~ 100 (156)
T 1bd8_A 28 HPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAA--RTGFLDTLKVLVEH----GADVNVPDGT 100 (156)
T ss_dssp CTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHT----TCCSCCCCTT
T ss_pred CccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH--HcCcHHHHHHHHHc----CCCCCCcCCC
Confidence 344567789999999 9999999999999999999999999999999999 99999999999986 8889999999
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhc
Q 043188 97 GDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKE 170 (197)
Q Consensus 97 ~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 170 (197)
|.||||+|+..++.+++++|++. +++.. .+..|.||||+|+..++.+++++|+++
T Consensus 101 g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~------------------~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 101 GALPIHLAVQEGHTAVVSFLAAE-SDLHR------------------RDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHTT-SCTTC------------------CCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CCcHHHHHHHhChHHHHHHHHhc-cCCCC------------------cCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 99999999999999999999998 77655 899999999999999999999999864
No 85
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.93 E-value=1.3e-25 Score=165.76 Aligned_cols=149 Identities=15% Similarity=0.070 Sum_probs=131.9
Q ss_pred cCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCC-CcHHH
Q 043188 24 QIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKG-DTPLH 102 (197)
Q Consensus 24 ~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~t~l~ 102 (197)
.|.||||.|+..|+.+++++|++.|.+++.++..|.||||+|+ ..|+.+++++|++. +.+++.++..| .||||
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~--~~g~~~~v~~Ll~~----ga~~~~~~~~g~~t~L~ 134 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAV--DSGNMQTVKLFVKK----NWRLMFYGKTGWKTSFY 134 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHH----CGGGGGCSSSGGGSHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHH--HcCCHHHHHHHHhc----CCCCCccCCCCCCCHHH
Confidence 5899999999999999999999999999999999999999999 99999999999997 89999999999 79999
Q ss_pred HHHHhCCHHHHHHHHHcCCCCccchhhHH---------------hhHHHHHHHhhccCCCCchH-HHHHHhcCCHHHHHH
Q 043188 103 VAAKFGHSDIVRVLVERAKLPQHENEELE---------------SRVGAARQMIRMTNNEKNTA-LHEAVCHQNVDVVEL 166 (197)
Q Consensus 103 ~a~~~~~~~~~~~ll~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~g~t~-l~~a~~~~~~~~~~~ 166 (197)
+|+..++.+++++|++.++...... .+. ..+...+.+++..+..|.|| ||+|+..++.+++++
T Consensus 135 ~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~ 213 (285)
T 3kea_A 135 HAVMLNDVSIVSYFLSEIPSTFDLA-ILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQA 213 (285)
T ss_dssp HHHHTTCHHHHHHHHTTSCTTCCCS-THHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCcccccc-CCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHH
Confidence 9999999999999999998774431 222 22223477789999999998 999999999999999
Q ss_pred HhhcCCCccccccc
Q 043188 167 LTKEDPDYQYSANN 180 (197)
Q Consensus 167 Ll~~g~~~~~~~~~ 180 (197)
|++.|++++ .++.
T Consensus 214 Ll~~gad~~-~~~~ 226 (285)
T 3kea_A 214 LFKYDINIY-SANL 226 (285)
T ss_dssp HTTSCBCST-TTTG
T ss_pred HHHcCCCCC-CCCh
Confidence 999999988 6653
No 86
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=6e-25 Score=142.63 Aligned_cols=115 Identities=28% Similarity=0.400 Sum_probs=108.0
Q ss_pred cCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHH
Q 043188 57 TKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGA 136 (197)
Q Consensus 57 ~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 136 (197)
+|.||||+|+ ..|+.+++++|++. +.+++.++..|.||||+|+..++.+++++|++.+.++..
T Consensus 1 ~g~t~L~~A~--~~~~~~~v~~Ll~~----~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~----------- 63 (126)
T 1n0r_A 1 NGRTPLHLAA--RNGHLEVVKLLLEA----GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA----------- 63 (126)
T ss_dssp CCCCHHHHHH--HHTCHHHHHHHHHH----TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-----------
T ss_pred CCccHHHHHH--HcCcHHHHHHHHHc----CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcc-----------
Confidence 4899999999 99999999999997 888899999999999999999999999999999998765
Q ss_pred HHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCCcHHHHHHhcccCC
Q 043188 137 ARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 137 ~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
.+..|.||||+|+..++.+++++|++.|++++ .++..|.|||++|+..|+.+
T Consensus 64 -------~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~ 115 (126)
T 1n0r_A 64 -------KDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARNGHLE 115 (126)
T ss_dssp -------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHH
T ss_pred -------cCCCCCcHHHHHHHcChHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCcHH
Confidence 88899999999999999999999999999988 89999999999999988754
No 87
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=1.1e-26 Score=153.42 Aligned_cols=129 Identities=18% Similarity=0.173 Sum_probs=115.6
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
..+..|.|+||.|+..|+.+++++|++.|.+++..+..|.||||+|+ ..++.+++++|++. +.+++.++..|.|
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~~~~Ll~~----g~~~~~~~~~g~t 78 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEAC--NHGHLKVVELLLQH----KALVNTTGYQNDS 78 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHH--HTTCHHHHHHHHHT----TCCTTCCCGGGCC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH--HcCCHHHHHHHHHc----CCcccCcCCCCCC
Confidence 45678899999999999999999999999999889999999999999 99999999999986 8889999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCC
Q 043188 100 PLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDP 172 (197)
Q Consensus 100 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~ 172 (197)
|||+|+..++.+++++|++.|+++.. .+..|.||+|+|+..+..+++++|.+.+.
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga~~~~------------------~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGASRNA------------------VNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 99999999999999999999999776 89999999999998888888877765543
No 88
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=1.2e-25 Score=145.79 Aligned_cols=112 Identities=19% Similarity=0.173 Sum_probs=80.7
Q ss_pred ccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHH
Q 043188 56 KTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVG 135 (197)
Q Consensus 56 ~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~ 135 (197)
..|.||||+|+ ..|+.+++++|++. +.+++.++..|.||||+|+..++.+++++|++.+++++.
T Consensus 5 ~~~~~~l~~A~--~~~~~~~v~~ll~~----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---------- 68 (123)
T 3aaa_C 5 SMCDKEFMWAL--KNGDLDEVKDYVAK----GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA---------- 68 (123)
T ss_dssp --CHHHHHHHH--HTTCHHHHHHHHHT----TCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTC----------
T ss_pred cccchHHHHHH--HcCCHHHHHHHHHc----CCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc----------
Confidence 35667777777 77777777777664 666777777777777777777777777777777776654
Q ss_pred HHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCCcHHHHHHhc
Q 043188 136 AARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKTPLYMAADY 192 (197)
Q Consensus 136 ~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~tpl~~A~~~ 192 (197)
.|..|.||||+|+..++.+++++|++.|++++ .+|..|.||+++|...
T Consensus 69 --------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 69 --------PDKHHITPLLSAVYEGHVSCVKLLLSKGADKT-VKGPDGLTAFEATDNQ 116 (123)
T ss_dssp --------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHCCCH
T ss_pred --------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHhCCH
Confidence 67777777777777777777777777777766 7777777777777443
No 89
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.92 E-value=9.7e-26 Score=161.40 Aligned_cols=130 Identities=15% Similarity=0.032 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHh---cccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHHHHHhCCHHHHHHHH
Q 043188 41 FKDMAREVIERL---LTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHVAAKFGHSDIVRVLV 117 (197)
Q Consensus 41 v~~Ll~~g~~~~---~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll 117 (197)
++.|+++|.+++ ..+..+.||||+|+ ..|+.+++++|++. +.+++.++..|.||||+|+..++.+++++|+
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~--~~g~~~~v~~Ll~~----g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll 74 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAA--LTGELEVVQQAVKE----MNDPSQPNEEGITALHNAICGANYSIVDFLI 74 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHH--HHTCHHHHHHHHHH----SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CeehhccCCCCccccccccchhHHHHHHH--HcCCHHHHHHHHhc----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 467888888776 34567788899999 99999999999987 8889999999999999999999999999999
Q ss_pred HcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCccccc-ccCCCcHHHHH--Hhccc
Q 043188 118 ERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSA-NNYGKTPLYMA--ADYRS 194 (197)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~-~~~g~tpl~~A--~~~~~ 194 (197)
+.|++++. .|..|.||||+|+..|+.+++++|++.|++++ .+ +..|.|||++| +..|+
T Consensus 75 ~~ga~~n~------------------~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~g~tpL~~A~a~~~~~ 135 (229)
T 2vge_A 75 TAGANVNS------------------PDSHGWTPLHCAASCNDTVICMALVQHGAAIF-ATTLSDGATAFEKCDPYREGY 135 (229)
T ss_dssp HTTCCTTC------------------CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT-CCCSSTTCCTGGGCCTTSTTH
T ss_pred HCCCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-cccCCCCCCHHHHHHHHhcCh
Confidence 99998776 89999999999999999999999999999998 55 47999999999 77665
Q ss_pred C
Q 043188 195 S 195 (197)
Q Consensus 195 ~ 195 (197)
.
T Consensus 136 ~ 136 (229)
T 2vge_A 136 A 136 (229)
T ss_dssp H
T ss_pred H
Confidence 4
No 90
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=4.2e-26 Score=162.45 Aligned_cols=135 Identities=24% Similarity=0.187 Sum_probs=110.3
Q ss_pred cccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHH
Q 043188 22 QSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPL 101 (197)
Q Consensus 22 ~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l 101 (197)
+..+.|+||.|+..|+.++++.|++.|.+++..+..|.||||+|+ ..|+.+++++|++. .+.+++.++..|.|||
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~---~g~~~~~~d~~g~tpL 144 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWAC--HGGHKDIVEMLFTQ---PNIELNQQNKLGDTAL 144 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HTTCHHHHHHHTTS---TTCCCCCCCTTSCCHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHH--HcCCHHHHHHHHcC---CCCCccccCCCCCCHH
Confidence 446688999999999999999999999988888899999999999 99999999988773 4788899999999999
Q ss_pred HHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCccccccc
Q 043188 102 HVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANN 180 (197)
Q Consensus 102 ~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~ 180 (197)
|+|+..++.+++++|++.|+++.. .+..|.||||+|+..++.++++.|++.|+... ..+.
T Consensus 145 ~~A~~~~~~~~v~~Ll~~ga~~~~------------------~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~-~~~~ 204 (222)
T 3ehr_A 145 HAAAWKGYADIVQLLLAKGARTDL------------------RNIEKKLAFDMATNAACASLLKKKQGTDAVRT-LSNA 204 (222)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCSCC------------------CCTTSCCHHHHCCSHHHHHHHC---------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcc------------------ccCCCCCHHHHhcchhHHHHHHHHhccchhhh-ccch
Confidence 999999999999999999998776 89999999999999999999999999988875 4444
No 91
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=1.1e-25 Score=146.06 Aligned_cols=111 Identities=19% Similarity=0.123 Sum_probs=102.9
Q ss_pred ccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHH
Q 043188 23 SQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLH 102 (197)
Q Consensus 23 ~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~ 102 (197)
+.+.++|+.|+..|+.+.++.|++.|.+++..+..|.||||+|+ ..++.+++++|++. +.+++.++..|.||||
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~~~~d~~g~tpL~ 78 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAA--DCGQLEILEFLLLK----GADINAPDKHHITPLL 78 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHH--HTTCHHHHHHHHTT----TCCTTCCCTTSCCHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHH--HcCCHHHHHHHHHc----CCCCCcCCCCCCCHHH
Confidence 56789999999999999999999999999989999999999999 99999999999885 8889999999999999
Q ss_pred HHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHh
Q 043188 103 VAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVC 157 (197)
Q Consensus 103 ~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~ 157 (197)
+|+..++.+++++|++.|+++.. .+..|.||+|+|..
T Consensus 79 ~A~~~~~~~~v~~Ll~~ga~~~~------------------~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 79 SAVYEGHVSCVKLLLSKGADKTV------------------KGPDGLTAFEATDN 115 (123)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHCCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHhCC
Confidence 99999999999999999998776 89999999999954
No 92
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.92 E-value=6.3e-25 Score=173.55 Aligned_cols=136 Identities=20% Similarity=0.226 Sum_probs=116.2
Q ss_pred CHHHHHHHHcCCcHHHHHHHHHHHHHhcc------cccCCcHHHHHHH-hhhcccccHHHHHHHHHhCCcccccCCCCCC
Q 043188 26 DPNLFKAAAAGNLEPFKDMAREVIERLLT------AKTKNTILHINII-SQERENVSTKFVAEILEKCPSLLLQVNAKGD 98 (197)
Q Consensus 26 ~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~------~~~g~t~lh~a~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 98 (197)
...|+.|+..|+.+.++.|++.|.+++.. +..|.||||+||. ...|+.+++++|++. +++++.++..|.
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~----ga~vn~~d~~g~ 208 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN----GGHLDAKAADGN 208 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH----SCCTTCCCSSSC
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHc----CCCCCccCCCCC
Confidence 36799999999999999999999988755 7899999999971 038899999999997 899999999999
Q ss_pred cHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCccccc
Q 043188 99 TPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSA 178 (197)
Q Consensus 99 t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~ 178 (197)
||||+|+..|+.+++++|+++|++++. .|..|.||||+|+..|+.+++++|++.|++++ .
T Consensus 209 TpLh~A~~~g~~~~v~~Ll~~ga~~~~------------------~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~-~- 268 (497)
T 3lvq_E 209 TALHYAALYNQPDCLKLLLKGRALVGT------------------VNEAGETALDIARKKHHKECEELLEQAQAGTF-A- 268 (497)
T ss_dssp CHHHHHTTTTCHHHHHHHHHTCCCCSC------------------CCTTCCCHHHHHHHTTCHHHHHHHHHTCC------
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCC-C-
Confidence 999999999999999999999999887 89999999999999999999999999999987 4
Q ss_pred ccCCCcHHHHHH
Q 043188 179 NNYGKTPLYMAA 190 (197)
Q Consensus 179 ~~~g~tpl~~A~ 190 (197)
+|+|.+.
T Consensus 269 -----~~~h~~~ 275 (497)
T 3lvq_E 269 -----FPLHVDY 275 (497)
T ss_dssp ------------
T ss_pred -----Ccceeec
Confidence 4555543
No 93
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.92 E-value=8.1e-26 Score=156.45 Aligned_cols=131 Identities=18% Similarity=0.128 Sum_probs=108.0
Q ss_pred cccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCC-CCCCcH
Q 043188 22 QSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVN-AKGDTP 100 (197)
Q Consensus 22 ~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~t~ 100 (197)
+..+.||||.|+..|+.+.++.|++ |.+++..+..|.||||+|+ ..|+.+++++|++. +.+++.++ ..|.||
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~--~~~~~~~v~~Ll~~----ga~~~~~~~~~g~tp 113 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVA--GLGSDKCVRLLAEA----GADLDHRDMRGGLTA 113 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHH--HHTCHHHHHHHHHT----TCCTTCCCSSSSCCH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHH--HcCCHHHHHHHHHc----CCCCCcCCCCCCCCH
Confidence 4577889999999999999999999 8888888889999999999 89999999988885 78888877 789999
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCccccccc
Q 043188 101 LHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANN 180 (197)
Q Consensus 101 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~ 180 (197)
||+|+..++.+++++|+++|+++.. .+..|.||||+|+..+ ...
T Consensus 114 L~~A~~~~~~~~v~~Ll~~ga~~~~------------------~d~~g~tpl~~A~~~~------------------~~~ 157 (183)
T 3deo_A 114 LHMAAGYVRPEVVEALVELGADIEV------------------EDERGLTALELAREIL------------------KTT 157 (183)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTC------------------CCTTSCCHHHHHHHHH------------------HTC
T ss_pred HHHHHhcCcHHHHHHHHHcCCCCcC------------------CCCCCCCHHHHHHHhc------------------cCc
Confidence 9999999999999999999888776 7888888888887532 113
Q ss_pred CCCcHHHHHHhcccC
Q 043188 181 YGKTPLYMAADYRSS 195 (197)
Q Consensus 181 ~g~tpl~~A~~~~~~ 195 (197)
.+.+|+++|++.|..
T Consensus 158 ~~~~~l~~a~~~~~~ 172 (183)
T 3deo_A 158 PKGNPMQFGRRIGLE 172 (183)
T ss_dssp CCCSHHHHHHHHHHH
T ss_pred ccccHHHHHHHcCHH
Confidence 456778877776653
No 94
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=1.5e-25 Score=161.92 Aligned_cols=141 Identities=18% Similarity=0.172 Sum_probs=105.9
Q ss_pred ccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCC-CCCCc
Q 043188 21 SQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVN-AKGDT 99 (197)
Q Consensus 21 ~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~t 99 (197)
.+..|.||||.|+..|+.++++.|++ |.+++.++..|.||||+|+ ..|+.+++++|++. +.+++.++ ..|.|
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~--~~g~~~~v~~Ll~~----ga~~~~~~~~~g~t 113 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVA--GLGSDKCVRLLAEA----GADLDHRDMRGGLT 113 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHH--HHTCHHHHHHHHHT----TCCTTCCCSSSCCC
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHH--HCCCHHHHHHHHHc----CCCCCcCCCCCCCC
Confidence 34578899999999999999999999 8888889999999999999 99999999999886 88888888 77999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhc
Q 043188 100 PLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKE 170 (197)
Q Consensus 100 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 170 (197)
|||+|+..++.+++++|+++|++++..+..+.+++..+.... ....+.||||+|+..|+.+++++|++.
T Consensus 114 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~--~~~~~~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 114 ALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL--KTTPKGNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHH--TTCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHH--hccCCCCHHHHHHHcChHHHHHHHHHh
Confidence 999999999999999999999998873333333333222211 122333344444444445555555443
No 95
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=2.4e-25 Score=150.24 Aligned_cols=118 Identities=14% Similarity=0.242 Sum_probs=107.7
Q ss_pred cccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHh
Q 043188 53 LTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELES 132 (197)
Q Consensus 53 ~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 132 (197)
..+..|.||||+|+ ..|+.+++++|++. +.+++.++..|.||||+|+ .++.+++++|++.|++++.
T Consensus 7 ~~~~~~~t~L~~A~--~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~------- 72 (156)
T 1bi7_B 7 SSMEPSADWLATAA--ARGRVEEVRALLEA----GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNC------- 72 (156)
T ss_dssp ---CCSTTHHHHHH--HHTCHHHHHHHHTT----TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC-------
T ss_pred CCCccchHHHHHHH--HcCCHHHHHHHHHc----CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCC-------
Confidence 45678999999999 99999999999885 8889999999999999985 8999999999999998776
Q ss_pred hHHHHHHHhhccCCCCch-HHHHHHhcCCHHHHHHHhhcCCCcccccccCCCcHHHHHHhcccCC
Q 043188 133 RVGAARQMIRMTNNEKNT-ALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 133 ~~~~~~~~~~~~~~~g~t-~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
.+..|.| |||+|+..++.+++++|++.|++++ .++..|.||||+|+..|+.+
T Consensus 73 -----------~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~ 125 (156)
T 1bi7_B 73 -----------ADPATLTRPVHDAAREGFLDTLVVLHRAGARLD-VRDAWGRLPVDLAEELGHRD 125 (156)
T ss_dssp -----------CCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSS-CCCTTCCCHHHHHHHHTCHH
T ss_pred -----------cCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHhCHHH
Confidence 8999999 9999999999999999999999998 99999999999999988754
No 96
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=1.9e-24 Score=149.60 Aligned_cols=115 Identities=23% Similarity=0.234 Sum_probs=106.6
Q ss_pred cccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhH
Q 043188 55 AKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRV 134 (197)
Q Consensus 55 ~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 134 (197)
+..|.||||+|+ ..|+.++++.|++ +.+++.++..|.||||+|+..++.+++++|++.|++++.
T Consensus 41 ~~~g~t~L~~A~--~~g~~~~v~~Ll~-----~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--------- 104 (183)
T 3deo_A 41 VSEYETPWWTAA--RKADEQALSQLLE-----DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH--------- 104 (183)
T ss_dssp HHHHHHHHHHHH--HTTCHHHHHHHTT-----TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC---------
T ss_pred CCCCCCHHHHHH--HcCCHHHHHHHHh-----cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc---------
Confidence 457899999999 9999999999887 678899999999999999999999999999999999876
Q ss_pred HHHHHHhhccC-CCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCCcHHHHHHhcccC
Q 043188 135 GAARQMIRMTN-NEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKTPLYMAADYRSS 195 (197)
Q Consensus 135 ~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~tpl~~A~~~~~~ 195 (197)
.+ ..|.||||+|+..++.+++++|++.|++++ .+|..|.||||+|++.++.
T Consensus 105 ---------~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~ 156 (183)
T 3deo_A 105 ---------RDMRGGLTALHMAAGYVRPEVVEALVELGADIE-VEDERGLTALELAREILKT 156 (183)
T ss_dssp ---------CCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHHHHT
T ss_pred ---------CCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCc-CCCCCCCCHHHHHHHhccC
Confidence 66 889999999999999999999999999998 9999999999999988764
No 97
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.91 E-value=5.8e-26 Score=170.68 Aligned_cols=144 Identities=15% Similarity=0.041 Sum_probs=121.7
Q ss_pred HHHHHHHcCCcHHHHHHHHHHHHHhc-ccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHHHHH
Q 043188 28 NLFKAAAAGNLEPFKDMAREVIERLL-TAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHVAAK 106 (197)
Q Consensus 28 ~l~~a~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~a~~ 106 (197)
.++.|+..+..++++.|++.|.+++. ++..|.||||+|+ ..|+.+++++|++. +++++.++..|.||||+|+.
T Consensus 100 ~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa--~~g~~~~v~~Ll~~----Gad~n~~d~~g~TpLh~A~~ 173 (327)
T 1sw6_A 100 QQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLT--SIANLELVKHLVKH----GSNRLYGDNMGESCLVKAVK 173 (327)
T ss_dssp ----CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHH--HTTCHHHHHHHHHT----TCCTTBCCTTCCCHHHHHHH
T ss_pred hhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHH--HcCCHHHHHHHHHc----CCCCCCcCCCCCCHHHHHHH
Confidence 35777888888888999999999998 8999999999999 99999999999996 89999999999999999999
Q ss_pred hCC---HHHHHHHHHcC-CCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHh----cCCHHHHHHHhhcCC------
Q 043188 107 FGH---SDIVRVLVERA-KLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVC----HQNVDVVELLTKEDP------ 172 (197)
Q Consensus 107 ~~~---~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~----~~~~~~~~~Ll~~g~------ 172 (197)
.++ .++++.|++.+ .++ +..+..|+||||+|+. .++.+++++|++.+.
T Consensus 174 ~g~~~~~~~~~~ll~~~~~~~------------------~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~ 235 (327)
T 1sw6_A 174 SVNNYDSGTFEALLDYLYPCL------------------ILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKK 235 (327)
T ss_dssp SSHHHHTTCHHHHHHHHGGGG------------------GEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHG
T ss_pred hcccccHHHHHHHHHhhhccc------------------cCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcc
Confidence 998 67777777765 333 3489999999999998 899999999987742
Q ss_pred ---------------------------------------CcccccccCCCcHHHHHHhcccCC
Q 043188 173 ---------------------------------------DYQYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 173 ---------------------------------------~~~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
+++ .+|..|.||||+|+..|+.+
T Consensus 236 ~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n-~~d~~G~TpLh~A~~~g~~~ 297 (327)
T 1sw6_A 236 QNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLN-AQDSNGDTCLNIAARLGNIS 297 (327)
T ss_dssp GGCCEEEC----------------CHHHHHCSHHHHHHHTTT-CCCTTSCCHHHHHHHHCCHH
T ss_pred cchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCC-CCCCCCCCHHHHHHHcCCHH
Confidence 344 78889999999999988754
No 98
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.90 E-value=3.8e-24 Score=162.58 Aligned_cols=145 Identities=19% Similarity=0.221 Sum_probs=116.6
Q ss_pred cCCHHHHHHHHc-CCcHHHHHHHHHHHHHhccc--ccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcH
Q 043188 24 QIDPNLFKAAAA-GNLEPFKDMAREVIERLLTA--KTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTP 100 (197)
Q Consensus 24 ~~~~~l~~a~~~-g~~~~v~~Ll~~g~~~~~~~--~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~ 100 (197)
...++||.|+.. |++++++.|++.|.+++..+ ..|.||||+|+ ..++.+++++|++. +++++.++..|.||
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa--~~g~~~iv~~LL~~----Gadvn~~d~~G~Tp 271 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQAT--AANSLLACEFLLQN----GANVNQADSAGRGP 271 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHH--HTTCHHHHHHHHHT----TCCTTCCCTTSCCH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHH--HCCCHHHHHHHHHc----CCCCCCCCCCCCCH
Confidence 345799999999 99999999999999999776 89999999999 99999999999986 89999999999999
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCC---cccc
Q 043188 101 LHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPD---YQYS 177 (197)
Q Consensus 101 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~---~~~~ 177 (197)
||+|+..++.+++++|+++|++++. .|..|.||||+|+..++.+++++|++.+.. .. .
T Consensus 272 Lh~A~~~g~~~~v~~LL~~Gad~~~------------------~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~-~ 332 (368)
T 3jue_A 272 LHHATILGHTGLACLFLKRGADLGA------------------RDSEGRDPLTIAMETANADIVTLLRLAKMREAEAA-Q 332 (368)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHHHC--------
T ss_pred HHHHHHcCcHHHHHHHHHCcCCCCC------------------cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccc-c
Confidence 9999999999999999999999876 899999999999999999999999976533 23 5
Q ss_pred cccCCCcHHHHHHhcc
Q 043188 178 ANNYGKTPLYMAADYR 193 (197)
Q Consensus 178 ~~~~g~tpl~~A~~~~ 193 (197)
.+..+.|+++++....
T Consensus 333 ~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 333 GQAGDETYLDIFRDFS 348 (368)
T ss_dssp ----------------
T ss_pred cCCCCCCHHHHHHHHH
Confidence 5667888888876654
No 99
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.90 E-value=1.6e-24 Score=154.29 Aligned_cols=118 Identities=23% Similarity=0.191 Sum_probs=109.4
Q ss_pred cccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHHHHHhCCHHHHHHHHHc-CCCCccchhhHH
Q 043188 53 LTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHVAAKFGHSDIVRVLVER-AKLPQHENEELE 131 (197)
Q Consensus 53 ~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~ 131 (197)
..+..|.||||+|+ ..|+.+++++|++. +.+++.++..|.||||+|+..++.+++++|++. +++++.
T Consensus 68 ~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~------ 135 (222)
T 3ehr_A 68 EQAESIDNPLHEAA--KRGNLSWLRECLDN----RVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQ------ 135 (222)
T ss_dssp HHEEEESCHHHHHH--HHTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCC------
T ss_pred cccccccccccccc--ccCcHHHHHHHHhC----CCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccc------
Confidence 35668999999999 99999999999885 888999999999999999999999999999998 888776
Q ss_pred hhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCCcHHHHHHhcccC
Q 043188 132 SRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKTPLYMAADYRSS 195 (197)
Q Consensus 132 ~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~tpl~~A~~~~~~ 195 (197)
.+..|.||||+|+..|+.+++++|++.|++++ .++..|.|||++|+..+..
T Consensus 136 ------------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~~~~ 186 (222)
T 3ehr_A 136 ------------QNKLGDTALHAAAWKGYADIVQLLLAKGARTD-LRNIEKKLAFDMATNAACA 186 (222)
T ss_dssp ------------CCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSC-CCCTTSCCHHHHCCSHHHH
T ss_pred ------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-cccCCCCCHHHHhcchhHH
Confidence 89999999999999999999999999999998 9999999999999887653
No 100
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=2.5e-25 Score=154.29 Aligned_cols=126 Identities=10% Similarity=-0.066 Sum_probs=111.0
Q ss_pred ccCCHHHHHHHHcCCc----HHHHHHHHHHHHHhcccccCCcHHHHHHHhhhccc------ccHHHHHHHHHhCCccccc
Q 043188 23 SQIDPNLFKAAAAGNL----EPFKDMAREVIERLLTAKTKNTILHINIISQEREN------VSTKFVAEILEKCPSLLLQ 92 (197)
Q Consensus 23 ~~~~~~l~~a~~~g~~----~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~------~~~~~l~~~l~~~~~~~~~ 92 (197)
..|.||||+|+..|+. +++++|++.|.+++.++..|.||||+|+ ..++. +++++|++. +++++.
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~--~~~~~~~~~~~~iv~~Ll~~----Gadin~ 109 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF--QGGGNDITGTTELCKIFLEK----GADITA 109 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH--HHCTTCHHHHHHHHHHHHHT----TCCSSS
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH--HcCCcchhhHHHHHHHHHHC----CCCCCc
Confidence 6789999999999975 4899999999999999999999999999 87764 456666664 999999
Q ss_pred CCCCCC-cHHHHHHHhCC-----HHHHHHHHH-cCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHH
Q 043188 93 VNAKGD-TPLHVAAKFGH-----SDIVRVLVE-RAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVE 165 (197)
Q Consensus 93 ~~~~~~-t~l~~a~~~~~-----~~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 165 (197)
+|..|. ||||+|+..+. .+++++|++ .|++++. .|..|.||||+|+..++.++++
T Consensus 110 ~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~------------------~d~~G~TpL~~A~~~~~~~~v~ 171 (186)
T 3t8k_A 110 LYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLI------------------KDKWGLTALEFVKRCQKPIALK 171 (186)
T ss_dssp CBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTC------------------CCTTSCCHHHHHHTTTCHHHHH
T ss_pred cCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcc------------------cCCCCCCHHHHHHHcCCHHHHH
Confidence 999999 99999998543 468999999 9999876 9999999999999999999999
Q ss_pred HHhhcCC
Q 043188 166 LLTKEDP 172 (197)
Q Consensus 166 ~Ll~~g~ 172 (197)
+|.+..-
T Consensus 172 ~L~~~~~ 178 (186)
T 3t8k_A 172 MMEDYIK 178 (186)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987543
No 101
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.90 E-value=1.5e-23 Score=154.07 Aligned_cols=127 Identities=17% Similarity=0.152 Sum_probs=116.2
Q ss_pred CCHHHHHHHHcCCcHHHHHHHHHHHHHh------cccccCCcHHHHHHHhhh---cccccHHHHHHHHHhCCcccccCCC
Q 043188 25 IDPNLFKAAAAGNLEPFKDMAREVIERL------LTAKTKNTILHINIISQE---RENVSTKFVAEILEKCPSLLLQVNA 95 (197)
Q Consensus 25 ~~~~l~~a~~~g~~~~v~~Ll~~g~~~~------~~~~~g~t~lh~a~~~~~---~~~~~~~~l~~~l~~~~~~~~~~~~ 95 (197)
..++|+.|+..|+.+.++.+++.|.+++ ..+..|.||||+|+ .. ++.+++++|++. +++++.++.
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~--~~~~~~~~~~v~~Ll~~----ga~in~~d~ 203 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAV--RSVDRTSLHIVDFLVQN----SGNLDKQTG 203 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHH--HHCCTTTHHHHHHHHHH----CSCTTCCCT
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHH--HhcccchHHHHHHHHHC----CCCccccCC
Confidence 3467999999999999999999998854 34788999999999 88 888999999997 899999999
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcc
Q 043188 96 KGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQ 175 (197)
Q Consensus 96 ~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~ 175 (197)
.|.||||+|+..++.+++++|+++|++++. .|..|.||||+|+..|+.+++++|++.|++..
T Consensus 204 ~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~------------------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 204 KGSTALHYCCLTDNAECLKLLLRGKASIEI------------------ANESGETPLDIAKRLKHEHCEELLTQALSGRF 265 (278)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------------------ccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999876 89999999999999999999999999988643
No 102
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=1.6e-23 Score=151.23 Aligned_cols=141 Identities=20% Similarity=0.167 Sum_probs=119.0
Q ss_pred CCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHHH
Q 043188 25 IDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHVA 104 (197)
Q Consensus 25 ~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~a 104 (197)
+.+++..++..|+.+.++.+...+.++ +..|.||||+|+ ..|+.++++.|++ +.+++.++..|.||||+|
T Consensus 15 ~~~~~l~~~~~g~~~~~~~~~~~~~~~---~~~g~t~L~~A~--~~g~~~~v~~Ll~-----~~~~~~~d~~g~t~L~~A 84 (244)
T 3ui2_A 15 GAMEYLIEWKDGHSPSWVPSSYIAADV---VSEYETPWWTAA--RKADEQALSQLLE-----DRDVDAVDENGRTALLFV 84 (244)
T ss_dssp TEEEEEEEESSCCCCEEEEGGGSCHHH---HHHHHHHHHHHH--TTTCHHHHHHTTT-----TCCTTCBCTTSCBHHHHH
T ss_pred CccHHHHHHHcCCCccccccccccccc---ccCCCCHHHHHH--HcCCHHHHHHHHc-----CCCCCCcCCCCCCHHHHH
Confidence 334455566666666655544444433 347899999999 9999999998877 678899999999999999
Q ss_pred HHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccC-CCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCC
Q 043188 105 AKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTN-NEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGK 183 (197)
Q Consensus 105 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~ 183 (197)
+..++.+++++|+++|++++. .+ ..|.||||+|+..|+.+++++|+++|++++ .+|..|.
T Consensus 85 ~~~g~~~~v~~Ll~~ga~~~~------------------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~ 145 (244)
T 3ui2_A 85 AGLGSDKCVRLLAEAGADLDH------------------RDMRGGLTALHMAAGYVRPEVVEALVELGADIE-VEDERGL 145 (244)
T ss_dssp HHHTCHHHHHHHHHTTCCTTC------------------CCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCC
T ss_pred HHCCCHHHHHHHHHcCCCCCc------------------CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCC
Confidence 999999999999999999876 66 789999999999999999999999999998 9999999
Q ss_pred cHHHHHHhccc
Q 043188 184 TPLYMAADYRS 194 (197)
Q Consensus 184 tpl~~A~~~~~ 194 (197)
||||+|+..+.
T Consensus 146 t~l~~A~~~~~ 156 (244)
T 3ui2_A 146 TALELAREILK 156 (244)
T ss_dssp CHHHHHHHHHT
T ss_pred cHHHHHHHHHh
Confidence 99999986544
No 103
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=9e-23 Score=125.79 Aligned_cols=93 Identities=27% Similarity=0.372 Sum_probs=80.4
Q ss_pred cCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHH
Q 043188 57 TKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGA 136 (197)
Q Consensus 57 ~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 136 (197)
+|.||||+|+ ..|+.+++++|++. +.+++.++..|.||||+|+..++.+++++|++.|++++.
T Consensus 1 ~g~t~L~~A~--~~~~~~~v~~Ll~~----g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~----------- 63 (93)
T 1n0q_A 1 NGRTPLHLAA--RNGHLEVVKLLLEA----GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA----------- 63 (93)
T ss_dssp --CCHHHHHH--HHTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-----------
T ss_pred CCCcHHHHHH--HcCCHHHHHHHHHc----CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-----------
Confidence 4789999999 88999988888875 788888888899999999999999999999999888765
Q ss_pred HHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCC
Q 043188 137 ARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPD 173 (197)
Q Consensus 137 ~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~ 173 (197)
.|..|.||||+|+..++.+++++|++.|++
T Consensus 64 -------~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 64 -------KDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp -------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred -------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 888899999999999999999999988874
No 104
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.88 E-value=6.6e-23 Score=131.25 Aligned_cols=109 Identities=25% Similarity=0.282 Sum_probs=98.4
Q ss_pred cccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHh
Q 043188 53 LTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELES 132 (197)
Q Consensus 53 ~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 132 (197)
.+|..|.||||+|+ ..++.+++++|++. +.+++.++..|.||||+|+..++.+++++|++.|+++..
T Consensus 4 ~~d~~g~t~L~~A~--~~~~~~~~~~Ll~~----g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------- 70 (115)
T 2l6b_A 4 WGSKDGNTPLHNAA--KNGHAEEVKKLLSK----GADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA------- 70 (115)
T ss_dssp CCSCSSCCHHHHHH--HHTCHHHHHHHTTT----TCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTC-------
T ss_pred ccCCCCCCHHHHHH--HcCCHHHHHHHHHc----CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc-------
Confidence 57889999999999 99999999998885 888999999999999999999999999999999998765
Q ss_pred hHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCCcHH
Q 043188 133 RVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKTPL 186 (197)
Q Consensus 133 ~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~tpl 186 (197)
.+..|.||||+|+..++.+++++|++.|++++ .++..|.+|-
T Consensus 71 -----------~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n-~~~~~~~~~~ 112 (115)
T 2l6b_A 71 -----------RSKDGNTPEHLAKKNGHHEIVKLLDAKGADVN-ARSWGSSHHH 112 (115)
T ss_dssp -----------CCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHH-HHSCCCC---
T ss_pred -----------cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-cCCccccccc
Confidence 88899999999999999999999999999998 8888888874
No 105
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.87 E-value=1e-24 Score=166.30 Aligned_cols=142 Identities=13% Similarity=0.104 Sum_probs=111.5
Q ss_pred CCHHHHHHHHcCCcHHHHHHHHHHHHHh---cccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcc---cccCCCCCC
Q 043188 25 IDPNLFKAAAAGNLEPFKDMAREVIERL---LTAKTKNTILHINIISQERENVSTKFVAEILEKCPSL---LLQVNAKGD 98 (197)
Q Consensus 25 ~~~~l~~a~~~g~~~~v~~Ll~~g~~~~---~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~---~~~~~~~~~ 98 (197)
+.||||.|+..|+.++|++|++.|.... ..+..|.||||+|+ ..|+.+++++|++. +++ .+..+.. .
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa--~~G~~eiv~~Ll~~----gad~~~~~i~~~~-~ 164 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAA--ENGHLHVLNRLCEL----APTEIMAMIQAEN-Y 164 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHH--HTTCHHHHHHHHHS----CTTTHHHHHSHHH-H
T ss_pred cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHH--HcCCHHHHHHHHhC----CCCccccccCCCC-C
Confidence 4599999999999999999999887221 23446788999999 99999999999885 532 1222222 8
Q ss_pred cHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHH-hcCCHHHHHHHhhcCCCcccc
Q 043188 99 TPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAV-CHQNVDVVELLTKEDPDYQYS 177 (197)
Q Consensus 99 t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~-~~~~~~~~~~Ll~~g~~~~~~ 177 (197)
||||+|+..|+.+++++|++.|+++.. +..+..|.||||+|+ ..|+.+++++|++.|+
T Consensus 165 TpLh~Aa~~G~~eiv~~Ll~~ga~~~~----------------~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga----- 223 (376)
T 2aja_A 165 HAFRLAAENGHLHVLNRLCELAPTEAT----------------AMIQAENYYAFRWAAVGRGHHNVINFLLDCPV----- 223 (376)
T ss_dssp HHHHHHHHTTCHHHHHHHHHSCGGGHH----------------HHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-----
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCccch----------------hccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-----
Confidence 999999999999999999999886431 014556899999999 9999999999998663
Q ss_pred cccCCCcHHHHHHhcccCCC
Q 043188 178 ANNYGKTPLYMAADYRSSNM 197 (197)
Q Consensus 178 ~~~~g~tpl~~A~~~~~~~i 197 (197)
.|.|||++|+..|+.++
T Consensus 224 ---~~~taL~~Aa~~g~~ev 240 (376)
T 2aja_A 224 ---MLAYAEIHEFEYGEKYV 240 (376)
T ss_dssp ---HHHHHHHCTTTTTTTTH
T ss_pred ---ccchHHHHHHHCCCHHH
Confidence 26799999999988763
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=1.9e-22 Score=124.31 Aligned_cols=93 Identities=27% Similarity=0.315 Sum_probs=86.9
Q ss_pred cCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHH
Q 043188 24 QIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHV 103 (197)
Q Consensus 24 ~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~ 103 (197)
.|.||||.|+..|+.+++++|++.|.+++.+|..|.||||+|+ ..++.+++++|++. +.+++.++..|.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~--~~~~~~~v~~Ll~~----ga~~~~~d~~g~t~l~~ 74 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAA--RNGHLEVVKLLLEA----GADVNAKDKNGRTPLHL 74 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHT----TCCTTCCCTTSCCHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH--HcCCHHHHHHHHHc----CCCCCccCCCCCCHHHH
Confidence 3678999999999999999999999999999999999999999 99999999999986 88999999999999999
Q ss_pred HHHhCCHHHHHHHHHcCCC
Q 043188 104 AAKFGHSDIVRVLVERAKL 122 (197)
Q Consensus 104 a~~~~~~~~~~~ll~~~~~ 122 (197)
|+..++.+++++|++.|++
T Consensus 75 A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 75 AARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHTTCHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHHcCCC
Confidence 9999999999999998863
No 107
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.86 E-value=1e-21 Score=149.20 Aligned_cols=118 Identities=15% Similarity=0.136 Sum_probs=107.5
Q ss_pred ccccCCcHHHHHHHhhh-cccccHHHHHHHHHhCCcccccCC--CCCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhH
Q 043188 54 TAKTKNTILHINIISQE-RENVSTKFVAEILEKCPSLLLQVN--AKGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEEL 130 (197)
Q Consensus 54 ~~~~g~t~lh~a~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~--~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~ 130 (197)
....+.|+||+|+ .. ++.++++.|++. +.+++..+ ..|.||||+|+..++.+++++|+++|++++.
T Consensus 195 ~~~~~~t~L~~Aa--~~~g~~~~v~~LL~~----Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~----- 263 (368)
T 3jue_A 195 GSLHPGALLFRAS--GHPPSLPTMADALAH----GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQ----- 263 (368)
T ss_dssp --CCHHHHHHHHT--SSSCCHHHHHHHHHT----TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-----
T ss_pred ccCCCCcHHHHHH--HccCCHHHHHHHHHc----CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-----
Confidence 3345668999999 99 999999999885 88899888 7899999999999999999999999999876
Q ss_pred HhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCCcHHHHHHhcccCC
Q 043188 131 ESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 131 ~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
.|..|.||||+|+..++.+++++|++.|++++ .+|..|.||||+|+..++.+
T Consensus 264 -------------~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~-~~d~~G~TpL~~A~~~g~~~ 315 (368)
T 3jue_A 264 -------------ADSAGRGPLHHATILGHTGLACLFLKRGADLG-ARDSEGRDPLTIAMETANAD 315 (368)
T ss_dssp -------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHH
T ss_pred -------------CCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCC-CcCCCCCCHHHHHHHCCCHH
Confidence 89999999999999999999999999999998 99999999999999988754
No 108
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.85 E-value=5.7e-21 Score=140.33 Aligned_cols=113 Identities=22% Similarity=0.240 Sum_probs=100.9
Q ss_pred CcHHHHHHHhhhcccccHHHHHHHHHhCCcc------cccCCCCCCcHHHHHHHh---CCHHHHHHHHHcCCCCccchhh
Q 043188 59 NTILHINIISQERENVSTKFVAEILEKCPSL------LLQVNAKGDTPLHVAAKF---GHSDIVRVLVERAKLPQHENEE 129 (197)
Q Consensus 59 ~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~------~~~~~~~~~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~ 129 (197)
.++|+.|+ ..++.+.++.++.. +.+ ++..+..|.||||+|+.. ++.+++++|+++|++++.
T Consensus 131 l~~l~~a~--~~~d~~~~~~ll~~----g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~---- 200 (278)
T 1dcq_A 131 LHSLCEAV--KTRDIFGLLQAYAD----GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDK---- 200 (278)
T ss_dssp HHHHHHHH--HTTCHHHHHHHHHT----TCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTC----
T ss_pred hhhhhhHh--hhcccHHHHHHHHh----hcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccc----
Confidence 46899999 99998888877764 555 444578899999999999 899999999999999876
Q ss_pred HHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCCcHHHHHHhcccCC
Q 043188 130 LESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
.|..|.||||+|+..|+.+++++|++.|++++ .+|..|.||||+|+..|+.+
T Consensus 201 --------------~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~g~tpL~~A~~~~~~~ 252 (278)
T 1dcq_A 201 --------------QTGKGSTALHYCCLTDNAECLKLLLRGKASIE-IANESGETPLDIAKRLKHEH 252 (278)
T ss_dssp --------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHH
T ss_pred --------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CccCCCCCHHHHHHHcCCHH
Confidence 89999999999999999999999999999998 99999999999999988754
No 109
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.84 E-value=5e-21 Score=142.15 Aligned_cols=114 Identities=23% Similarity=0.198 Sum_probs=103.3
Q ss_pred CCcHHHHHHHhhhcccccHHHHHHHHHhCCccccc------CCCCCCcHHHHHHHh---CCHHHHHHHHHcCCCCccchh
Q 043188 58 KNTILHINIISQERENVSTKFVAEILEKCPSLLLQ------VNAKGDTPLHVAAKF---GHSDIVRVLVERAKLPQHENE 128 (197)
Q Consensus 58 g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~------~~~~~~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~ 128 (197)
..++|+.|+ ..++.+.++.+++. +.+++. .+..|.||||+|+.. ++.+++++|++.|++++.
T Consensus 151 ~~~~L~~A~--~~g~~~~v~~ll~~----g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~--- 221 (301)
T 2b0o_E 151 EPQRLWTAI--CNRDLLSVLEAFAN----GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA--- 221 (301)
T ss_dssp CHHHHHHHH--HTTCHHHHHHHHHT----TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTC---
T ss_pred hHHHHhhhh--hccCHHHHHHHHhc----CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCC---
Confidence 346799999 99999999888764 777776 588899999999997 889999999999998776
Q ss_pred hHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCCcHHHHHHhcccCC
Q 043188 129 ELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
.|..|.||||+|+..|+.+++++|++.|++++ .+|..|.|||++|+..|+.+
T Consensus 222 ---------------~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~G~TpL~~A~~~~~~~ 273 (301)
T 2b0o_E 222 ---------------KAADGNTALHYAALYNQPDCLKLLLKGRALVG-TVNEAGETALDIARKKHHKE 273 (301)
T ss_dssp ---------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCS-CCCTTSCCHHHHHHHHTCHH
T ss_pred ---------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHH
Confidence 89999999999999999999999999999998 99999999999999988754
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=7e-21 Score=150.45 Aligned_cols=114 Identities=23% Similarity=0.184 Sum_probs=104.8
Q ss_pred CCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccC------CCCCCcHHHHHHH---hCCHHHHHHHHHcCCCCccchh
Q 043188 58 KNTILHINIISQERENVSTKFVAEILEKCPSLLLQV------NAKGDTPLHVAAK---FGHSDIVRVLVERAKLPQHENE 128 (197)
Q Consensus 58 g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~------~~~~~t~l~~a~~---~~~~~~~~~ll~~~~~~~~~~~ 128 (197)
..+.||.|+ ..|+.+.++.|++. +.+++.+ +..|.||||+|+. .++.+++++|+++|++++.
T Consensus 132 ~~~~L~~A~--~~g~~~~v~~ll~~----g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~--- 202 (497)
T 3lvq_E 132 EPQRLWTAI--CNRDLLSVLEAFAN----GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA--- 202 (497)
T ss_dssp CHHHHHHHH--HHTCHHHHHHHHHT----TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTC---
T ss_pred cHHHHHHHH--hccCHHHHHHHHhh----cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCc---
Confidence 346799999 99999999999885 7888877 7889999999977 8999999999999999876
Q ss_pred hHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccccccCCCcHHHHHHhcccCC
Q 043188 129 ELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYSANNYGKTPLYMAADYRSSN 196 (197)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~g~tpl~~A~~~~~~~ 196 (197)
.|..|+||||+|+..|+.+++++|++.|++++ .+|..|.||||+|+..|+.+
T Consensus 203 ---------------~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~ 254 (497)
T 3lvq_E 203 ---------------KAADGNTALHYAALYNQPDCLKLLLKGRALVG-TVNEAGETALDIARKKHHKE 254 (497)
T ss_dssp ---------------CCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCS-CCCTTCCCHHHHHHHTTCHH
T ss_pred ---------------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHH
Confidence 89999999999999999999999999999998 99999999999999988754
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.84 E-value=5.4e-22 Score=126.94 Aligned_cols=100 Identities=23% Similarity=0.262 Sum_probs=93.4
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
..+..+.|+||.|+..|+.++++.|++.|.+++..+..|.||||+|+ ..++.+++++|++. +.+++.++..|.|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~--~~~~~~~~~~Ll~~----g~~~~~~d~~g~t 77 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAA--KNGHAEIVKLLLAK----GADVNARSKDGNT 77 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHH--TTTCHHHHHHHTTT----TCCTTCCCTTCCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH--HcCcHHHHHHHHHc----CCCCcccCCCCCC
Confidence 45678899999999999999999999999998889999999999999 99999999999885 8889999999999
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCCcc
Q 043188 100 PLHVAAKFGHSDIVRVLVERAKLPQH 125 (197)
Q Consensus 100 ~l~~a~~~~~~~~~~~ll~~~~~~~~ 125 (197)
|||+|+..++.+++++|+++|++++.
T Consensus 78 pl~~A~~~~~~~~~~~Ll~~ga~~n~ 103 (115)
T 2l6b_A 78 PEHLAKKNGHHEIVKLLDAKGADVNA 103 (115)
T ss_dssp TTHHHHTTTCHHHHHHHHTTSSSHHH
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCCCc
Confidence 99999999999999999999998765
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.83 E-value=5.2e-22 Score=151.34 Aligned_cols=141 Identities=15% Similarity=0.110 Sum_probs=110.8
Q ss_pred CHHHHHHHH-cCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcc---cccCCCCCCcHH
Q 043188 26 DPNLFKAAA-AGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSL---LLQVNAKGDTPL 101 (197)
Q Consensus 26 ~~~l~~a~~-~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~---~~~~~~~~~t~l 101 (197)
-++++.|.. .++.+.++++++.|. .+.||||+|+ +.|+.+++++|++. +.. ....+..+.|||
T Consensus 66 ll~~~~a~~~~~~~~~~~~l~~~g~-------~~~T~Lh~Aa--~~G~~e~v~~Ll~~----ga~~~~~~~~~~~~~tpL 132 (376)
T 2aja_A 66 LLCLYYAHYNRNAKQLWSDAHKKGI-------KSEVICFVAA--ITGCSSALDTLCLL----LTSDEIVKVIQAENYQAF 132 (376)
T ss_dssp HHHHHHHHTTTTCTTHHHHHHHHTC-------CHHHHHHHHH--HHCCHHHHHHHTTC------CCSSCC--CHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHcCC-------CcCCHHHHHH--HcCCHHHHHHHHHc----CCcHHHHHHhccCCCCHH
Confidence 345666666 577888888888765 3459999999 99999999999885 431 123344678999
Q ss_pred HHHHHhCCHHHHHHHHHcCCCCccchhhHHhhHHHHHHHhhccCCCCchHHHHHHhcCCHHHHHHHhhcCCCcccc--cc
Q 043188 102 HVAAKFGHSDIVRVLVERAKLPQHENEELESRVGAARQMIRMTNNEKNTALHEAVCHQNVDVVELLTKEDPDYQYS--AN 179 (197)
Q Consensus 102 ~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~--~~ 179 (197)
|+|+.+|+.+++++|++.|+++.. .+..+.. .||||+|+..|+.+++++|++.|+++. . .+
T Consensus 133 ~~Aa~~G~~eiv~~Ll~~gad~~~---------------~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~-~~~~d 195 (376)
T 2aja_A 133 RLAAENGHLHVLNRLCELAPTEIM---------------AMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEA-TAMIQ 195 (376)
T ss_dssp HHHHHTTCHHHHHHHHHSCTTTHH---------------HHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGH-HHHHH
T ss_pred HHHHHcCCHHHHHHHHhCCCCccc---------------cccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccc-hhccC
Confidence 999999999999999999975321 1112223 899999999999999999999999987 5 78
Q ss_pred cCCCcHHHHHH-hcccCC
Q 043188 180 NYGKTPLYMAA-DYRSSN 196 (197)
Q Consensus 180 ~~g~tpl~~A~-~~~~~~ 196 (197)
..|.||||+|+ ..|+.+
T Consensus 196 ~~g~TpL~~Aa~~~G~~e 213 (376)
T 2aja_A 196 AENYYAFRWAAVGRGHHN 213 (376)
T ss_dssp HHHHHHHHHHHSTTCCHH
T ss_pred CCCCCHHHHHHHHCCCHH
Confidence 88999999999 998754
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.78 E-value=2.9e-19 Score=113.35 Aligned_cols=89 Identities=21% Similarity=0.298 Sum_probs=47.5
Q ss_pred cccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCccchhhHHhhH
Q 043188 55 AKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTPLHVAAKFGHSDIVRVLVERAKLPQHENEELESRV 134 (197)
Q Consensus 55 ~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 134 (197)
+.+|.||||+|+ ..|+.+++++|++. +.+++.++..|.||||+|+..++.+++++|++.|+++..
T Consensus 21 ~~~g~t~L~~A~--~~g~~~~v~~Ll~~----g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~--------- 85 (110)
T 2zgd_A 21 GSDLGKKLLEAA--RAGQDDEVRILMAN----GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXA--------- 85 (110)
T ss_dssp -CCHHHHHHHHH--HHTCHHHHHHHHHT----TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC---------
T ss_pred CCccchHHHHHH--HcCCHHHHHHHHHc----CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc---------
Confidence 445555555555 55555555555543 445555555555555555555555555555555555443
Q ss_pred HHHHHHhhccCCCCchHHHHHHhcCCHHHHHHH
Q 043188 135 GAARQMIRMTNNEKNTALHEAVCHQNVDVVELL 167 (197)
Q Consensus 135 ~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 167 (197)
.+..|.||||+|+..++.+++++|
T Consensus 86 ---------~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 86 ---------QDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp ---------CCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred ---------cccCCCcHHHHHHHcCCHHHHHHh
Confidence 455555555555555555555544
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.78 E-value=7e-19 Score=111.59 Aligned_cols=91 Identities=19% Similarity=0.243 Sum_probs=83.9
Q ss_pred cccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCc
Q 043188 20 ISQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDT 99 (197)
Q Consensus 20 ~~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t 99 (197)
..+..+.++||.|+..|+.+++++|++.|.+++.+|..|.||||+|+ ..++.+++++|++. +.+++.++..|.|
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~--~~~~~~~v~~Ll~~----ga~~~~~d~~g~t 92 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAA--RNGHLEVVKLLLEA----GADVXAQDKFGKT 92 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH--HTTCHHHHHHHHHT----TCCTTCCCTTSCC
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH--HcCCHHHHHHHHHc----CCCccccccCCCc
Confidence 45678899999999999999999999999999999999999999999 99999999999986 8889999999999
Q ss_pred HHHHHHHhCCHHHHHHH
Q 043188 100 PLHVAAKFGHSDIVRVL 116 (197)
Q Consensus 100 ~l~~a~~~~~~~~~~~l 116 (197)
|||+|+..++.+++++|
T Consensus 93 pl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 93 AFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHh
Confidence 99999999999999886
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=81.50 E-value=0.96 Score=21.69 Aligned_cols=19 Identities=21% Similarity=0.501 Sum_probs=15.8
Q ss_pred HHHHHHHcCCcHHHHHHHH
Q 043188 28 NLFKAAAAGNLEPFKDMAR 46 (197)
Q Consensus 28 ~l~~a~~~g~~~~v~~Ll~ 46 (197)
-+..||..|++++++.|-.
T Consensus 16 qiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHH
Confidence 3788999999999988754
No 116
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=50.85 E-value=26 Score=23.42 Aligned_cols=21 Identities=29% Similarity=0.213 Sum_probs=15.9
Q ss_pred CHHHHHHHHcCCcHHHHHHHH
Q 043188 26 DPNLFKAAAAGNLEPFKDMAR 46 (197)
Q Consensus 26 ~~~l~~a~~~g~~~~v~~Ll~ 46 (197)
++-|..|+..|+++....+.+
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~ 29 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAK 29 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHH
Confidence 345788888898888777765
No 117
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=26.00 E-value=29 Score=26.66 Aligned_cols=49 Identities=10% Similarity=0.094 Sum_probs=27.0
Q ss_pred HHHHcCCcHHHHHHHHHHHHHhcc--------------cccCCcHHHHHHHhhhcccccHHHHHH
Q 043188 31 KAAAAGNLEPFKDMAREVIERLLT--------------AKTKNTILHINIISQERENVSTKFVAE 81 (197)
Q Consensus 31 ~a~~~g~~~~v~~Ll~~g~~~~~~--------------~~~g~t~lh~a~~~~~~~~~~~~~l~~ 81 (197)
..+..|+...|+.-+..|.++..+ -..|.|.+|.|+ ++.+.+++..|+.
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlai--r~~r~~~l~~ll~ 90 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAI--RFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHH--HTTCHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhh--hhhhhhHHHHhhh
Confidence 345568888888777766554310 023555555555 5555555544443
No 118
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=24.09 E-value=2.5e+02 Score=21.70 Aligned_cols=24 Identities=25% Similarity=0.314 Sum_probs=22.0
Q ss_pred CCCchHHHHHHhcCCHHHHHHHhh
Q 043188 146 NEKNTALHEAVCHQNVDVVELLTK 169 (197)
Q Consensus 146 ~~g~t~l~~a~~~~~~~~~~~Ll~ 169 (197)
..|.|.+|+|++..+.+++..|+.
T Consensus 67 ~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 67 DVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred ccCchhhhhhhhhhhhhHHHHhhh
Confidence 369999999999999999999986
No 119
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=23.26 E-value=1.4e+02 Score=18.55 Aligned_cols=87 Identities=9% Similarity=-0.030 Sum_probs=52.7
Q ss_pred ccccCCHHHHHHHHcCCcHHHHHHHHHHHHHhcccccCCcHHHHHHHhhhcccccHHHHHHHHHhCCcccccCCCCCCcH
Q 043188 21 SQSQIDPNLFKAAAAGNLEPFKDMAREVIERLLTAKTKNTILHINIISQERENVSTKFVAEILEKCPSLLLQVNAKGDTP 100 (197)
Q Consensus 21 ~~~~~~~~l~~a~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~lh~a~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~t~ 100 (197)
.+.-...++..|+.+++.+.++.||....+ .|..-.+.||+...-+.-...+++++ ...-+.. +-..|
T Consensus 31 kDkLykDAietAa~S~d~elaEeLL~yFVe------~g~kEcF~A~LytCYdLlrpDvVLEl----aWr~~l~--Df~mP 98 (125)
T 3qil_A 31 KDSLYKDAMQYASESKDTELAEELLQWFLQ------EEKRECFGACLFTCYDLLRPDVVLEL----AWRHNIM--DFAMP 98 (125)
T ss_dssp CCCCSSHHHHTTTSSCCSHHHHHHHHHHTT------SCSHHHHHHHHHHHTTCSCTTHHHHT----TSSSSCC--CCCCC
T ss_pred hcccHHHHHHHHHHcCCHHHHHHHHHHHHH------cCchHHHHHHHHHHHhccChHHHHHH----HHHhccc--cccch
Confidence 445557789999999999999999997664 23344455553222233333445563 3222222 23567
Q ss_pred HHHHHHhCCHHHHHHHHHc
Q 043188 101 LHVAAKFGHSDIVRVLVER 119 (197)
Q Consensus 101 l~~a~~~~~~~~~~~ll~~ 119 (197)
+.+-+......-++.|...
T Consensus 99 Y~Iqv~re~~~kv~~L~~~ 117 (125)
T 3qil_A 99 YFIQVMKEYLTKVDKLDAS 117 (125)
T ss_dssp SHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 7777777766666666543
Done!