BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043189
(182 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P16273|PRPX_HORVU Pathogen-related protein OS=Hordeum vulgare PE=2 SV=2
Length = 235
Score = 196 bits (498), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 125/185 (67%), Gaps = 3/185 (1%)
Query: 1 DKYRSILNEEA-KSTQWRHGGPPIFDKVNKLFEEGRTKEWPKGSIEETVQNAVKSWEMEL 59
DKYRS L+ + K T WRHG PP +D VNKLFEE RTKEW +GS+EE VQ +K+WEME+
Sbjct: 9 DKYRSFLHGDGEKKTVWRHGAPPNYDLVNKLFEEERTKEWAEGSVEEKVQRLLKTWEMEM 68
Query: 60 SHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETF 119
HK D K++N + + NG K L+ EE + +G YNA L +LP E + Y + E+
Sbjct: 69 VHKVRPEDQKSVNLKNYSASTNGLKPLTREEVMAMGGYNAFLATTLPPEHRIYDPEAESV 128
Query: 120 KSSHDAFRSAFPRGFAWEVISVFSGP--PVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGI 177
+S+ F +AFPRGFA EV+ V+S P P +A+KFRHWGY EGPF+GH P G VEF+G+
Sbjct: 129 ESATSTFLTAFPRGFAIEVLDVYSSPSAPRIAFKFRHWGYMEGPFKGHPPHGGRVEFFGV 188
Query: 178 GIMKV 182
+ V
Sbjct: 189 CVFHV 193
>sp|Q0AY00|SYFA_SYNWW Phenylalanine--tRNA ligase alpha subunit OS=Syntrophomonas wolfei
subsp. wolfei (strain Goettingen) GN=pheS PE=3 SV=1
Length = 340
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 13/85 (15%)
Query: 46 ETVQNAVKSWEMELSHKTSLNDF--KTINPE-KFKLIVNGRKDLSGEETLQLGSYNALLK 102
E ++N ++ ++S LN+F KT+ + + L++ G KDLSGEE + G LK
Sbjct: 6 EEIKNECQARLSQVSSMEELNEFRIKTLGRKGEVTLLLRGLKDLSGEEKARAGRVANELK 65
Query: 103 NSLPKEFQYYRADEETFKSSHDAFR 127
+L E+ + DAF+
Sbjct: 66 QNL----------EQMLREKIDAFK 80
>sp|P41834|UFE1_YEAST Syntaxin UFE1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=UFE1 PE=1 SV=2
Length = 346
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 21/117 (17%)
Query: 46 ETVQNAVKSWE-------------MELSHKTSLND-------FKTINPEKFKLIVNGRKD 85
ETVQ+ VK +E +E H LN +TIN IVN + +
Sbjct: 223 ETVQDEVKHYEETISKLTQEQLQVLETEHSELLNQKNEQLKKVETINKTILD-IVNIQNE 281
Query: 86 LSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSSHDAFRSAFPRGFAWEVISVF 142
LS T+Q + N +L N E + ++E K+ A R+A + ++ VF
Sbjct: 282 LSNHLTVQSQNINLMLNNQDDIELNIKKGNKELRKAKRAAGRTAKMTTYGAIIMGVF 338
>sp|Q4L4H1|Y2145_STAHJ Uncharacterized membrane protein SH2145 OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=SH2145 PE=4 SV=1
Length = 356
Score = 30.8 bits (68), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 52 VKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDL-------SGEETLQLGSYNALLKNS 104
VK ++ L+H + + + K + + ++G KD+ SG+ L+ S LLKN
Sbjct: 199 VKEFDRHLNHVSQIAEDKNESLALLLIDIDGFKDVNDTYSHKSGDAVLKQMS--QLLKNY 256
Query: 105 LPKEFQYYRADEETF 119
+PK+FQ +R E F
Sbjct: 257 VPKQFQIFRNGGEEF 271
>sp|P42346|MTOR_RAT Serine/threonine-protein kinase mTOR OS=Rattus norvegicus GN=Mtor
PE=1 SV=1
Length = 2549
Score = 30.0 bits (66), Expect = 8.7, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 12/128 (9%)
Query: 13 STQWRHGGPPIFDKVNKLFEEGRTKEWPKGSIEETVQNAVKSWEMELSHKTSLNDFKTIN 72
S Q H P + +V + + K K + +Q+ V++ + + H + D +
Sbjct: 1682 SRQLDHPLPTVHPQVTYAYMKNMWKSARKIDAFQHMQHFVQTMQQQAQHAIATED-QQHK 1740
Query: 73 PEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSSHDAFRSAFPR 132
E KL+ L GE L L N ++++PK QYY A E HD RS +
Sbjct: 1741 QELHKLMARCFLKL-GEWQLNLQGIN---ESTIPKVLQYYSAATE-----HD--RSWYKA 1789
Query: 133 GFAWEVIS 140
AW V++
Sbjct: 1790 WHAWAVMN 1797
>sp|P42345|MTOR_HUMAN Serine/threonine-protein kinase mTOR OS=Homo sapiens GN=MTOR PE=1
SV=1
Length = 2549
Score = 30.0 bits (66), Expect = 9.4, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 12/128 (9%)
Query: 13 STQWRHGGPPIFDKVNKLFEEGRTKEWPKGSIEETVQNAVKSWEMELSHKTSLNDFKTIN 72
S Q H P + +V + + K K + +Q+ V++ + + H + D +
Sbjct: 1682 SRQLDHPLPTVHPQVTYAYMKNMWKSARKIDAFQHMQHFVQTMQQQAQHAIATED-QQHK 1740
Query: 73 PEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSSHDAFRSAFPR 132
E KL+ L GE L L N ++++PK QYY A E HD RS +
Sbjct: 1741 QELHKLMARCFLKL-GEWQLNLQGIN---ESTIPKVLQYYSAATE-----HD--RSWYKA 1789
Query: 133 GFAWEVIS 140
AW V++
Sbjct: 1790 WHAWAVMN 1797
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.135 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,921,050
Number of Sequences: 539616
Number of extensions: 3012682
Number of successful extensions: 6994
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 6992
Number of HSP's gapped (non-prelim): 14
length of query: 182
length of database: 191,569,459
effective HSP length: 110
effective length of query: 72
effective length of database: 132,211,699
effective search space: 9519242328
effective search space used: 9519242328
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)