Query 043189
Match_columns 182
No_of_seqs 122 out of 137
Neff 4.4
Searched_HMMs 29240
Date Tue Mar 26 00:23:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043189.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043189hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kkg_A Putative snoal-like pol 99.6 1.4E-15 4.7E-20 114.3 6.5 69 113-182 51-119 (146)
2 3f9s_A Putative polyketide cyc 99.6 2.6E-15 8.9E-20 112.6 5.9 69 113-182 50-118 (146)
3 3ehc_A Snoal-like polyketide c 99.5 1.4E-14 4.8E-19 106.6 7.2 68 114-182 39-106 (128)
4 2f99_A Aklanonic acid methyl e 99.5 2.5E-14 8.6E-19 109.2 5.6 68 114-182 52-120 (153)
5 1sjw_A Nogalonic acid methyl e 99.4 5.3E-13 1.8E-17 98.9 9.2 68 114-182 43-111 (144)
6 2gex_A SNOL; alpha+beta barrel 99.4 1.2E-12 4E-17 99.1 10.4 68 114-182 43-110 (152)
7 2gey_A ACLR protein; alpha+bet 99.4 2.9E-12 9.9E-17 97.9 10.4 68 114-182 42-109 (158)
8 3f8h_A Putative polyketide cyc 99.0 8.9E-10 3.1E-14 84.5 8.9 68 114-182 58-127 (150)
9 3i0y_A Putative polyketide cyc 99.0 2.1E-09 7.2E-14 78.8 8.4 66 115-182 49-117 (140)
10 3f7x_A Putative polyketide cyc 98.9 6.9E-09 2.4E-13 79.4 8.8 104 43-182 21-129 (151)
11 3k0z_A Putative polyketide cyc 98.8 2.2E-08 7.4E-13 77.2 8.3 60 113-182 73-132 (159)
12 4h3u_A Hypothetical protein; s 98.7 7.3E-08 2.5E-12 73.3 7.9 61 114-182 66-126 (158)
13 3hk4_A MLR7391 protein; NTF2-l 98.6 1E-07 3.4E-12 73.2 7.9 62 113-182 63-124 (136)
14 3g0k_A Putative membrane prote 98.4 1.4E-07 4.8E-12 72.6 4.2 58 113-182 65-122 (148)
15 3er7_A Uncharacterized NTF2-li 98.4 4.5E-07 1.6E-11 69.7 6.0 60 114-182 46-107 (131)
16 3ebt_A Uncharacterized NTF2-li 98.4 6.1E-07 2.1E-11 64.9 5.7 60 114-182 50-109 (132)
17 3fh1_A Uncharacterized NTF2-li 98.3 5.7E-07 1.9E-11 66.0 3.7 55 114-182 61-115 (129)
18 3grd_A Uncharacterized NTF2-su 98.3 4E-06 1.4E-10 61.1 8.2 61 114-182 48-111 (134)
19 3ec9_A Uncharacterized NTF2-li 98.2 4.7E-06 1.6E-10 61.2 8.3 61 114-182 56-117 (140)
20 3fgy_A Uncharacterized NTF2-li 98.2 2.2E-06 7.5E-11 62.4 5.9 61 114-182 49-109 (135)
21 3g8z_A Protein of unknown func 98.1 1.1E-05 3.8E-10 61.0 9.0 60 114-182 64-124 (148)
22 3ff2_A Uncharacterized cystati 98.1 6.7E-06 2.3E-10 59.1 7.1 61 113-182 42-105 (117)
23 3dm8_A Uncharacterized protein 98.0 3.7E-05 1.3E-09 57.6 8.8 108 42-182 4-111 (143)
24 3rga_A Epoxide hydrolase; NTF2 97.8 7E-05 2.4E-09 63.3 8.5 66 114-182 179-258 (283)
25 3f14_A Uncharacterized NTF2-li 97.8 0.00015 5.1E-09 52.2 9.0 60 114-182 40-99 (112)
26 1nww_A Limonene-1,2-epoxide hy 97.7 0.00019 6.3E-09 53.0 9.1 60 114-182 62-122 (149)
27 2k54_A Protein ATU0742; protei 97.7 0.00012 4E-09 52.7 7.1 58 114-182 44-101 (123)
28 1s5a_A Hypothetical protein YE 97.7 5.3E-05 1.8E-09 55.5 5.1 61 114-182 55-117 (150)
29 1oh0_A Steroid delta-isomerase 97.5 0.00013 4.4E-09 52.1 5.5 59 114-182 48-107 (131)
30 2a15_A Hypothetical protein RV 97.4 0.0012 4E-08 48.0 8.8 59 114-182 55-115 (139)
31 1ohp_A Steroid delta-isomerase 97.3 0.00043 1.5E-08 48.1 5.5 57 114-182 46-103 (125)
32 1tuh_A BAL32A, hypothetical pr 97.2 0.0022 7.5E-08 48.0 9.2 101 44-182 31-133 (156)
33 3jum_A Phenazine biosynthesis 97.2 0.0019 6.7E-08 52.7 9.5 62 113-182 84-150 (185)
34 3ff0_A Phenazine biosynthesis 97.1 0.0036 1.2E-07 50.2 9.7 62 113-182 62-128 (163)
35 1z1s_A Hypothetical protein PA 97.0 0.00055 1.9E-08 52.2 3.8 60 114-182 68-129 (163)
36 3g16_A Uncharacterized protein 97.0 0.0024 8.1E-08 50.6 7.5 55 114-181 53-109 (156)
37 3h3h_A Uncharacterized snoal-l 96.8 0.0035 1.2E-07 45.1 6.4 39 114-153 56-94 (122)
38 3dxo_A Uncharacterized snoal-l 96.7 0.0082 2.8E-07 43.8 8.4 58 113-182 45-103 (121)
39 3dmc_A NTF2-like protein; stru 96.6 0.018 6E-07 42.9 9.7 59 115-182 56-115 (134)
40 3rga_A Epoxide hydrolase; NTF2 96.6 0.003 1E-07 53.3 6.0 62 113-182 46-109 (283)
41 2bng_A MB2760; epoxide hydrola 96.5 0.0068 2.3E-07 44.9 6.9 58 114-182 55-112 (149)
42 1tp6_A Hypothetical protein PA 94.5 0.063 2.1E-06 39.9 5.4 47 114-161 50-99 (128)
43 3lyg_A NTF2-like protein of un 94.0 0.065 2.2E-06 41.5 4.6 43 109-151 38-80 (120)
44 3hx8_A MLR2180 protein, putati 93.3 0.81 2.8E-05 31.7 9.1 101 43-178 3-104 (129)
45 3d9r_A Ketosteroid isomerase-l 92.1 1.2 4E-05 31.2 8.7 57 115-176 52-109 (135)
46 3en8_A Uncharacterized NTF-2 l 91.3 0.97 3.3E-05 33.0 7.8 51 115-182 47-98 (128)
47 3mso_A Steroid delta-isomerase 88.5 1.8 6.3E-05 32.3 7.5 53 114-182 50-104 (143)
48 3f8x_A Putative delta-5-3-keto 80.1 7.6 0.00026 29.5 7.6 84 42-155 16-99 (148)
49 3gb3_A Killerred; fluorescent 76.4 4.2 0.00014 34.5 5.6 58 109-169 66-130 (235)
50 3rob_A Uncharacterized conserv 74.2 17 0.00059 26.9 8.0 58 115-178 57-115 (139)
51 3flj_A Uncharacterized protein 72.8 5.9 0.0002 30.9 5.3 39 114-155 59-97 (155)
52 2ejo_A Fluorescent protein; GF 72.7 6 0.0002 33.3 5.6 44 109-155 65-108 (223)
53 3ned_A Pamcherry1 protein; RFP 71.5 6.5 0.00022 33.5 5.6 80 70-155 34-123 (242)
54 2ejh_A CYAN-emitting GFP-like 67.3 6.1 0.00021 33.9 4.6 44 109-155 97-140 (255)
55 3ai5_A Yeast enhanced green fl 65.0 11 0.00036 32.8 5.7 45 109-154 69-113 (307)
56 2zmu_A Fluorescent protein; GF 63.1 9.8 0.00033 32.0 4.9 30 125-154 78-107 (223)
57 3evp_A Circular-permutated gre 63.0 9.7 0.00033 32.5 4.9 82 70-155 122-212 (243)
58 2a50_B ASFP595, GFP-like non-f 62.9 7.5 0.00026 31.3 4.1 30 125-154 15-44 (168)
59 3ako_A Venus; fluorescent prot 61.1 12 0.00041 30.5 4.9 45 109-154 87-131 (173)
60 2gxf_A Hypothetical protein YY 58.6 25 0.00085 25.1 6.0 56 114-176 43-100 (142)
61 2c9i_A Green fluorescent prote 56.9 15 0.00052 30.9 5.0 43 109-154 64-106 (226)
62 1yzw_A Hcred, GFP-like non-flu 55.8 15 0.00053 30.8 4.9 43 109-154 64-106 (225)
63 3u8p_A Cytochrome B562 integra 55.6 15 0.0005 32.9 4.9 67 75-154 154-221 (347)
64 2hqk_A CYAN fluorescent chromo 55.3 16 0.00055 30.6 4.9 43 109-154 62-104 (219)
65 3f40_A Uncharacterized NTF2-li 55.1 36 0.0012 24.0 6.3 35 115-155 46-80 (114)
66 2hpw_A Green fluorescent prote 55.1 16 0.00055 30.8 4.9 43 109-154 69-111 (233)
67 2icr_A RED fluorescent protein 54.8 16 0.00056 30.9 4.9 44 109-155 75-118 (237)
68 2iov_A Fluorescent protein dro 54.1 17 0.0006 31.1 5.0 43 109-154 96-138 (255)
69 3p28_A Green fluorescent prote 54.0 17 0.00059 30.9 4.9 32 124-155 32-63 (239)
70 3cgl_A GFP-like fluorescent ch 53.6 17 0.0006 30.8 4.9 43 109-154 78-120 (241)
71 3vht_B Green fluorescent prote 52.6 18 0.00062 31.2 4.9 31 124-154 83-113 (271)
72 2wur_A Green fluorescent prote 51.6 20 0.00067 30.4 4.9 81 70-154 21-110 (236)
73 2rh7_A Green fluorescent prote 50.8 15 0.00051 31.2 4.1 43 109-154 67-109 (239)
74 2ib5_A Chromo protein, cjblue; 50.8 15 0.00051 31.1 4.1 31 124-154 79-109 (233)
75 2c9j_A Green fluorescent prote 50.7 15 0.00051 30.8 4.1 30 125-154 76-105 (223)
76 3ir8_A Large stokes shift fluo 50.4 21 0.00073 29.9 4.9 31 125-155 78-108 (221)
77 1xmz_A ASCP595, GFP-like chrom 49.2 16 0.00055 31.0 4.1 30 125-154 88-117 (241)
78 3e5t_A FP611;, RED fluorescent 48.6 17 0.00057 30.9 4.1 44 109-155 77-120 (242)
79 2a46_A GFP-like fluorescent ch 48.6 17 0.00058 30.9 4.1 43 109-154 80-122 (238)
80 2gw3_A Kaede; beta barrel, lum 46.6 16 0.00054 30.8 3.6 43 109-154 65-107 (225)
81 2g6y_A Green fluorescent prote 46.3 27 0.00093 29.1 4.9 32 124-155 70-102 (217)
82 3ai4_A Yeast enhanced green fl 46.2 26 0.00089 30.5 4.9 45 109-154 69-113 (283)
83 2dd7_A Green fluorescent prote 45.4 25 0.00086 29.3 4.6 32 124-155 67-99 (216)
84 3rwa_A Fluorescent protein FP4 44.5 21 0.00073 30.2 4.1 81 69-155 87-177 (233)
85 2zo6_A CYAN-emitting GFP-like 42.7 23 0.0008 30.3 4.1 30 125-154 107-136 (252)
86 2jad_A Yellow fluorescent prot 42.7 30 0.001 30.7 4.9 45 109-154 66-110 (362)
87 3osr_A Maltose-binding peripla 42.1 29 0.00098 32.4 4.9 120 30-155 422-559 (653)
88 3u0k_A Rcamp; fluorescent prot 34.5 47 0.0016 30.4 4.9 80 69-154 168-257 (440)
89 1p3q_Q VPS9P, vacuolar protein 32.7 15 0.00051 24.5 1.0 24 116-140 9-32 (54)
90 2ed6_A 25KDA structural protei 30.8 28 0.00097 27.2 2.5 24 157-180 86-109 (170)
91 3h51_A Putative calcium/calmod 28.1 1.7E+02 0.0057 21.0 9.4 56 114-177 61-118 (156)
92 3f7s_A Uncharacterized NTF2-li 23.6 1.9E+02 0.0064 20.1 7.8 40 115-154 50-91 (142)
93 3eja_A Protein GH61E; beta san 22.4 30 0.001 28.4 1.2 21 142-162 52-72 (208)
94 4eis_A Polysaccharide monooxyg 21.5 24 0.00084 29.3 0.6 24 138-162 62-86 (225)
No 1
>3kkg_A Putative snoal-like polyketide cyclase; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, lyase; HET: MSE PGE; 1.40A {Jannaschia SP}
Probab=99.59 E-value=1.4e-15 Score=114.34 Aligned_cols=69 Identities=25% Similarity=0.339 Sum_probs=66.3
Q ss_pred CCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 113 RADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 113 ~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
..|++++.+....++.+||+ +.++|++++++++.|+++|+..|||.|+|+|++|||+++++.|++++||
T Consensus 51 ~~G~~~~~~~~~~~~~~~pd-~~~~i~~~~~~gd~v~~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~~ 119 (146)
T 3kkg_A 51 VEGIEQAIAFNAVLFEGFPR-LEVVVENVTVEGDNVVVQARLTGAQDGPFLGVPPSGQMVDVPDVTLFTL 119 (146)
T ss_dssp EESHHHHHHHHHHHHHHSTT-CEEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCC-ceeEEEEEEEeCCEEEEEEEEEEEecCccCCcCCCCCEEEEEEEEEEEE
Confidence 35889999999999999999 9999999999999999999999999999999999999999999999986
No 2
>3f9s_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative; 1.76A {Acidithiobacillus ferrooxidans atcc 23}
Probab=99.56 E-value=2.6e-15 Score=112.55 Aligned_cols=69 Identities=17% Similarity=0.349 Sum_probs=66.2
Q ss_pred CCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 113 RADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 113 ~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
..+++++.+....++++||+ +.+++.+++++++.|+++|+..|||+|+|.|++|||+++++.|++++||
T Consensus 50 ~~G~~~~~~~~~~~~~~~pd-~~~~i~~~~~~gd~v~~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~~ 118 (146)
T 3f9s_A 50 ELDVAGYKERVKTLRAAFPD-QCFDIQGLFADGDAVVMTWLWTATHKEDIPGFPSTGKQIKMSGATVYYF 118 (146)
T ss_dssp EECHHHHHHHHHHHHHHSTT-CEEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHhhCCC-cEEEEEEEEEeCCEEEEEEEEEEEecCCCCCcCCCCCEEEEEEEEEEEE
Confidence 35889999999999999999 9999999999999999999999999999999999999999999999985
No 3
>3ehc_A Snoal-like polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.12A {Agrobacterium tumefaciens str}
Probab=99.53 E-value=1.4e-14 Score=106.63 Aligned_cols=68 Identities=12% Similarity=0.045 Sum_probs=65.5
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.+++++.+.+..++++||+ +.++|.+++++++.|+.+|+..|||+|+|.|++|||+++++.|++++||
T Consensus 39 ~G~~~~~~~~~~~~~~~pd-~~~~i~~~~~~gd~v~~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~~ 106 (128)
T 3ehc_A 39 FGLSGYRDMLVKDFADIPD-LRFEAEILVSDATRLAARLFFDCTPKSIFMDLPVNGRRVQFCEHVFYDF 106 (128)
T ss_dssp CHHHHHHHHHHHHHHHCTT-CCCCEEEEEECSSEEEEEEEEEECCSSEETTEECTTCCEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHhhCCC-ceEEEEEEEEECCEEEEEEEEEEEEcCcccCCCCCCCEEEEEEEEEEEE
Confidence 4788999999999999999 9999999999999999999999999999999999999999999999986
No 4
>2f99_A Aklanonic acid methyl ester cyclase, AKNH; anthracycline,polyketide cyclase,stereoselectivity, aklavino biosynthetic protein; HET: AKV; 1.90A {Streptomyces galilaeus} SCOP: d.17.4.9 PDB: 2f98_A*
Probab=99.48 E-value=2.5e-14 Score=109.19 Aligned_cols=68 Identities=19% Similarity=0.256 Sum_probs=65.8
Q ss_pred CChHHHHHHHHHHHHhCC-CCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFKSSHDAFRSAFP-RGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFP-dGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.|++++.+....+..+|| + +.+++++++++++.|+++|+..|||.|+|+|++|||+++++.|++++||
T Consensus 52 ~G~~~~~~~~~~~~~~~p~d-~~~~i~~~~~~gd~v~~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~v 120 (153)
T 2f99_A 52 RGPELFAINVAWVKKTFSEE-ARLEEVGIEERADWVRARLVLYGRHVGEMVGMAPTGRLFSGEQIHLLHF 120 (153)
T ss_dssp CHHHHHHHHHHHHHHHHCTT-CEEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCC-cEEEEEEEEEeCCEEEEEEEEEEEecCCCCCcCCCCCEEEEEEEEEEEE
Confidence 588999999999999999 8 9999999999999999999999999999999999999999999999985
No 5
>1sjw_A Nogalonic acid methyl ester cyclase; anthracyclines, nogalamycin, snoal, aldol condensation, LYAS structural genomics; HET: NGV; 1.35A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=99.43 E-value=5.3e-13 Score=98.93 Aligned_cols=68 Identities=18% Similarity=0.240 Sum_probs=65.7
Q ss_pred CChHHHHHHHHHHHHhCC-CCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFKSSHDAFRSAFP-RGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFP-dGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.|++++.+....+.++|| + +.+++++++++++.|+.+|+..|+|+|+|+|++|||+++++.|++++||
T Consensus 43 ~G~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~gd~v~~~~~~~gt~~g~~~G~~~tG~~~~~~~~~~~~~ 111 (144)
T 1sjw_A 43 TGPKAFAQLVGWVRATFSEE-ARLEEVRIEERGPWVKAYLVLYGRHVGRLVGMPPTDRRFSGEQVHLMRI 111 (144)
T ss_dssp SHHHHHHHHHHHHHHHHCTT-CEEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCC-cEEEEEEEEEeCCEEEEEEEEEEEecCCCCCcCCCCCEEEEEEEEEEEE
Confidence 588999999999999999 8 9999999999999999999999999999999999999999999999985
No 6
>2gex_A SNOL; alpha+beta barrel, oxidoreductase; 2.50A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=99.41 E-value=1.2e-12 Score=99.07 Aligned_cols=68 Identities=22% Similarity=0.312 Sum_probs=65.7
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.|++++.+....+..+||+ +.+++.+++++++.|+++|+..||++|+|+|+||||+++++.|++++||
T Consensus 43 ~G~~~~~~~~~~~~~~~~~-~~~~i~~~~~~gd~v~~~~~~~gt~~g~~~G~~~tG~~~~~~~~~~~~~ 110 (152)
T 2gex_A 43 VSAEEVVRRMNSAVEAFPD-LRLDVRSIVGEGDRVMLRITCSATHQGVFMGIAPTGRKVRWTYLEELRF 110 (152)
T ss_dssp ECHHHHHHHHHHHHHHCTT-CEEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCC-cEEEEEEEEEeCCEEEEEEEEEEEecCCcCCcCCCCCEEEEEEEEEEEE
Confidence 4889999999999999999 9999999999999999999999999999999999999999999999985
No 7
>2gey_A ACLR protein; alpha+beta barrel, oxidoreductase; HET: PG4; 1.80A {Streptomyces galilaeus} SCOP: d.17.4.9
Probab=99.38 E-value=2.9e-12 Score=97.93 Aligned_cols=68 Identities=22% Similarity=0.310 Sum_probs=65.5
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.|++++.+....+..+||+ +.+++.+++++++.|+++|+..|++.|+|.|++|||+++++.|++++||
T Consensus 42 ~G~~~~~~~~~~~~~~~~~-~~~~i~~~~~~gd~v~~~~~~~gt~~g~~~G~~~tG~~~~~~~~~~~~~ 109 (158)
T 2gey_A 42 VSSADMVKLMEGGLKAFPD-LQLEVKSIMAEEDRVALRITVTATHQGEFMGVQPTGQRVSWHLVEELRF 109 (158)
T ss_dssp ECHHHHHHHHHHHHHHSTT-CEEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCC-cEEEEEEEEEeCCEEEEEEEEEEEecCCCCCcCCCCCEEEEEEEEEEEE
Confidence 4789999999999999999 9999999999999999999999999999999999999999999999985
No 8
>3f8h_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 2.00A {Silicibacter SP}
Probab=99.03 E-value=8.9e-10 Score=84.46 Aligned_cols=68 Identities=7% Similarity=0.091 Sum_probs=58.9
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEEEEee-eCCCEEEEEEEEEeeeeccccccC-CCCCEEEEEeEEEEEC
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEVISVF-SGPPVVAYKFRHWGYFEGPFQGHA-PTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~-s~pp~VafrwrhwGt~~G~F~G~~-pTGk~Vei~Gi~i~rV 182 (182)
.|++.+.+....+.++||+ ...++.-+. ++|++|+++|+..|+|.|+|.|+| |||++|++.|+.++||
T Consensus 58 ~G~e~i~~~~~~~~~~~~~-~~~~~~~~~~~~gd~v~~~~~~~gt~~g~~~G~p~~tG~~v~~~~~~~~~~ 127 (150)
T 3f8h_A 58 VGKEKFAAFCAHMSHCYKE-ELTDMVIFATPDATRAAAEYTVNGTYLATDEGLPEARQQSYKLPAGSFFDL 127 (150)
T ss_dssp ESHHHHHHHHHHHHHHEEE-EEEEEEEEECTTSSEEEEEEEEEEEECSCCTTSCCCSSEEEEEEEEEEEEE
T ss_pred eCHHHHHHHHHHHHHhCCc-cccceEEEEecCCCEEEEEEEEEEEEecCCCCCcCCCCCEEEEeeeEEEEE
Confidence 4788999999999999998 433433333 689999999999999999999999 9999999999999986
No 9
>3i0y_A Putative polyketide cyclase; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG, protein structure initiative; HET: MSE UNL; 1.50A {Xanthomonas campestris PV}
Probab=98.97 E-value=2.1e-09 Score=78.84 Aligned_cols=66 Identities=15% Similarity=0.201 Sum_probs=55.0
Q ss_pred ChHHHHHHHHHHHHhCCCCceeEEEEee--eCCCEEEEEEEEEeeeeccccccC-CCCCEEEEEeEEEEEC
Q 043189 115 DEETFKSSHDAFRSAFPRGFAWEVISVF--SGPPVVAYKFRHWGYFEGPFQGHA-PTGEMVEFYGIGIMKV 182 (182)
Q Consensus 115 ~~e~f~~s~~~f~~AFPdGf~wEVleV~--s~pp~VafrwrhwGt~~G~F~G~~-pTGk~Vei~Gi~i~rV 182 (182)
|++.+......+..+||. .++.+.+. ++|++|+.+|+..|||.|+|.|+| |||+++++.|+.++||
T Consensus 49 G~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gd~v~~~~~~~gt~~g~~~g~p~~tG~~~~~~~~~~~~~ 117 (140)
T 3i0y_A 49 GRAAFASFLQRMNDSYRE--QLRDIVVTANDEGTRVGAEYVVHGVYHTTDEGLPDANGQTYVLPGGAFFDV 117 (140)
T ss_dssp SHHHHHHHHHHHHHHEEE--EEEEEEEEECTTSSEEEEEEEEEEEECSCCTTSSCCSCEEEEEEEEEEEEE
T ss_pred cHHHHHHHHHHHhhhcch--hhhheeeeecccCCEEEEEEEEEEEeecccCCCcCCCCCEEEEEeeEEEEE
Confidence 667888888888888763 34333332 789999999999999999999998 9999999999999985
No 10
>3f7x_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440}
Probab=98.88 E-value=6.9e-09 Score=79.38 Aligned_cols=104 Identities=11% Similarity=0.156 Sum_probs=75.2
Q ss_pred CHHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCccCchhhhhhcCccccccccCCCCccccCCCChHHHHHH
Q 043189 43 SIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSS 122 (182)
Q Consensus 43 SLe~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~~~~~~G~Yn~~l~~~lp~~~~~Y~~~~e~f~~s 122 (182)
...++|+.+...| -+-|++.+.++-.+.+.+..+.|. --.|++.+.+.
T Consensus 21 ~~~~lv~~~~~a~-----~~~D~~~l~~l~a~D~v~~~p~g~---------------------------~~~G~e~i~~~ 68 (151)
T 3f7x_A 21 TATELVNAYYAAF-----NAGDMPAFLALLSEDVIHDINQGE---------------------------RQMGKARFAAF 68 (151)
T ss_dssp CHHHHHHHHHHHH-----HHTCHHHHHHTEEEEEEEECTTSC---------------------------EEESHHHHHHH
T ss_pred HHHHHHHHHHHHH-----HcCCHHHHHHhcCCCEEEECCCCC---------------------------CcCCHHHHHHH
Confidence 3456777776544 345666666655555554332221 02367788888
Q ss_pred HHHHHHhCCCCceeEEEEee----eCCCEEEEEEEEEeeeeccccccC-CCCCEEEEEeEEEEEC
Q 043189 123 HDAFRSAFPRGFAWEVISVF----SGPPVVAYKFRHWGYFEGPFQGHA-PTGEMVEFYGIGIMKV 182 (182)
Q Consensus 123 ~~~f~~AFPdGf~wEVleV~----s~pp~VafrwrhwGt~~G~F~G~~-pTGk~Vei~Gi~i~rV 182 (182)
...+.++|+ .++.+++ ++|++|+.+|+..|+|.|+|.|+| |||+++++.++.++||
T Consensus 69 ~~~~~~~~~----~~~~~~~~~~~~~gd~v~~~~~~~gt~~g~~~G~p~~tG~~~~~~~~~~~~~ 129 (151)
T 3f7x_A 69 MEKMNRCYR----ERLADIVVMQNADGSRAAAEFTVHGQYLADDEGLPTANGQTYVLPAGAFFYI 129 (151)
T ss_dssp HHHHHHHEE----EEEEEEEEEECTTSSEEEEEEEEEEEECSCCTTSCCCSSCEEEEEEEEEEEE
T ss_pred HHHHHHhhc----cceeEEEEEEecCCCEEEEEEEEEEEEeccCCCCcCCCCCEEEEEEEEEEEE
Confidence 887777774 3444444 999999999999999999999999 9999999999999985
No 11
>3k0z_A Putative polyketide cyclase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS lipoprotein; HET: NHE; 1.91A {Bacillus cereus}
Probab=98.77 E-value=2.2e-08 Score=77.22 Aligned_cols=60 Identities=20% Similarity=0.359 Sum_probs=56.6
Q ss_pred CCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 113 RADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 113 ~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
..|++++.+....++++||+ +.+++.+++++|+.|+++|+..|+|. |+++++.|++++||
T Consensus 73 ~~G~e~~~~~~~~~~~~~pd-~~~~i~~~~~~gd~v~~~~~~~gt~~---------G~~v~~~~~~i~r~ 132 (159)
T 3k0z_A 73 PQGTEGLKFAAQNFRKIVPN-IHCEIEDLLVVGDKVTARLSFTGTHN---------DKKIDFFAIDILHV 132 (159)
T ss_dssp CSSHHHHHHHHHHHHTTCCS-EEEEEEEEEEETTEEEEEEEEEEEET---------TEEEEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCC-cEEEEEEEEEECCEEEEEEEEEEEEC---------CeEEEEEEEEEEEE
Confidence 35889999999999999999 99999999999999999999999987 99999999999985
No 12
>4h3u_A Hypothetical protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.15A {Catenulispora acidiphila}
Probab=98.65 E-value=7.3e-08 Score=73.33 Aligned_cols=61 Identities=5% Similarity=-0.013 Sum_probs=57.0
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.|++.++..+..+.++||+ +.++|.+++++|++|+++|+..|++. +||++|++.|+++++|
T Consensus 66 ~Greai~~~~~~~~~~~~d-~~~~v~~~~~~gd~v~~~~~~~gt~~-------~tG~~~~~~~~~v~~~ 126 (158)
T 4h3u_A 66 TGREQISGWKARTDAMIEN-VHVTITKAYRAGDHVTIEAVYGGHIK-------GAPTPFAVPMATLLRT 126 (158)
T ss_dssp ESHHHHHHHHHHHHHHEEE-EEEEEEEEEEETTEEEEEEEEEEEET-------TSSSCEEEEEEEEEEE
T ss_pred ecchhhhhhhhhhhccCCc-cceeEeEEeecCceEEEEEEEEEEec-------CccCcceeeeEEEEEE
Confidence 4889999999999999999 99999999999999999999999975 4999999999999985
No 13
>3hk4_A MLR7391 protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, lyase; HET: MSE; 1.96A {Mesorhizobium loti}
Probab=98.62 E-value=1e-07 Score=73.22 Aligned_cols=62 Identities=16% Similarity=0.194 Sum_probs=57.0
Q ss_pred CCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 113 RADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 113 ~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
-.|++.+++....|+.+||. ..++|.++++.+++|+++|+..|||. |||++|++.|++|+||
T Consensus 63 ~~G~eai~~~~~~~~~~~~~-~~~~i~~~~v~gd~v~v~~~~~gth~-------~tG~~i~~~~i~v~rv 124 (136)
T 3hk4_A 63 SHGKEALRQKSQWWQENHEV-HGGSVEGPYVNGDQFALRFKFDVTPK-------ATGERVTMDEVGLYTV 124 (136)
T ss_dssp EESHHHHHHHHHHHHHTEEE-EEEEEEEEEEETTEEEEEEEEEEEET-------TTCCCEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHhcCCe-eeeeecceEEcCCEEEEEEEEEEEEC-------CCCcEEEEEEEEEEEE
Confidence 35889999999999999996 78899999999999999999999994 7999999999999986
No 14
>3g0k_A Putative membrane protein; snoal-like polyketide cyclase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.30A {Novosphingobium aromaticivorans}
Probab=98.43 E-value=1.4e-07 Score=72.57 Aligned_cols=58 Identities=17% Similarity=0.121 Sum_probs=50.7
Q ss_pred CCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 113 RADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 113 ~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
..|+++|......++++||+ +.++|.+++++||.|+++|+..+ .|+|+ .+.+++|+||
T Consensus 65 ~~G~e~~~~~~~~~~~~~pd-~~~~i~~iiaeGD~V~~~~~~~~---------~~~g~--~~~~~difr~ 122 (148)
T 3g0k_A 65 EPSVEALKGFLDRVRAESPD-ARQTIHRSFVDGDHVITHTHVER---------WPGDA--GLAVVDIFRV 122 (148)
T ss_dssp CSSHHHHHHHHHHHHHHCCS-CEEEEEEEEEETTEEEEEEEEEC---------STTCC--CEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCC-ceEEEEEEEEECCEEEEEEEEEE---------CCCCc--cEEEEEEEEE
Confidence 36899999999999999999 99999999999999999999763 26675 5688999885
No 15
>3er7_A Uncharacterized NTF2-like protein; YP_001812677.1, NTF2-like protein of unknown function, struc genomics; HET: MSE; 1.50A {Exiguobacterium sibiricum 255-15} SCOP: d.17.4.24
Probab=98.39 E-value=4.5e-07 Score=69.69 Aligned_cols=60 Identities=10% Similarity=0.061 Sum_probs=53.3
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEEE--EeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEVI--SVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEVl--eV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.|++.+++++..|+.|||+ ..+.+. .+.++++.|+++|+..|+ +++|++|++.|++|++|
T Consensus 46 ~G~~ai~~F~~~~~~a~~~-~~~~~~~~v~~~~gd~~~~~w~~~g~--------~~~G~~~~~~g~dv~~f 107 (131)
T 3er7_A 46 HGIDAWKQFVRMVFTANQD-IKHMYAGWVPSETGDTMETRWAVCGK--------SADGSVFTQDGTDIARL 107 (131)
T ss_dssp ESHHHHHHHHHHHHHHEEE-EEEEECCCEECSSTTCEEEEEEEEEE--------ETTSCEEEEEEEEEEEE
T ss_pred CChHHHHHHHHHHHhhCcC-ceEEEEEEEEecCCCEEEEEEEEEEE--------ECCCCEEEEeeeEEEEE
Confidence 6999999999999999999 775544 446788999999999999 89999999999999986
No 16
>3ebt_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; 1.30A {Burkholderia pseudomallei K96243} SCOP: d.17.4.9
Probab=98.35 E-value=6.1e-07 Score=64.95 Aligned_cols=60 Identities=3% Similarity=-0.067 Sum_probs=54.2
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.|++.+......+..+||+ +.+++.+++++++.|++.|++. |.+|||+++++.++.++||
T Consensus 50 ~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gd~v~v~~~~~--------~~~~~G~~~~~~~~~v~~~ 109 (132)
T 3ebt_A 50 HGHDEVIAFIRHVPTHIAE-MRLAPDEFIESGERIVVLGTRR--------VTAVNGRSATLKFVHVWRF 109 (132)
T ss_dssp EHHHHHHHHHHHGGGTEEE-EEEEEEEEEEETTEEEEEEEEE--------EEETTSCEEEEEEEEEEEE
T ss_pred cCHHHHHHHHHHHHhhCCc-eEEEEeEEEEeCCEEEEEEEEE--------EEeCCCCEEeeeEEEEEEE
Confidence 4788999999999999998 9999999999999999998865 4589999999999999985
No 17
>3fh1_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.25 E-value=5.7e-07 Score=66.05 Aligned_cols=55 Identities=16% Similarity=0.305 Sum_probs=50.2
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.|++.+...+.. ..+||+ +.+++.+++++++.|+++|+..| |+++++.|++++||
T Consensus 61 ~G~~~i~~~~~~-~~~~~~-~~~~i~~~~~~gd~v~~~~~~~~------------G~~~~~~~~~~~~~ 115 (129)
T 3fh1_A 61 AGRQACVQLWSA-IATQPG-TRFDLEETFVAGDRATIRWRYWM------------ADGNSVRGVNLMRV 115 (129)
T ss_dssp ESHHHHHHHHHH-HHHCTT-CEEEEEEEEEETTEEEEEEEEEC------------TTSCEEEEEEEEEE
T ss_pred cCHHHHHHHHHH-HhcCCC-ceEEEeEEEEcCCEEEEEEEEEC------------CCeeEEeceEEEEE
Confidence 588999999988 899999 99999999999999999998755 88999999999985
No 18
>3grd_A Uncharacterized NTF2-superfamily protein; NP_977240.1, NTF2-superfamily protein with unknown function, structural genomics; HET: MSE; 1.25A {Bacillus cereus atcc 10987} SCOP: d.17.4.0
Probab=98.25 E-value=4e-06 Score=61.06 Aligned_cols=61 Identities=16% Similarity=0.138 Sum_probs=54.8
Q ss_pred CChHHHH-HHHHHHHHhCCCCceeEEEEe--eeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFK-SSHDAFRSAFPRGFAWEVISV--FSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~-~s~~~f~~AFPdGf~wEVleV--~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.|++.+. ..+..+.++||+ +.+++.++ +++|++|+..|+..|++ +|||+++++.++.|+||
T Consensus 48 ~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~gd~v~v~~~~~~~~-------~~tG~~~~~~~~~v~~~ 111 (134)
T 3grd_A 48 IGVEAIMENVFSRLGSEWND-YKASVNMYHEVSGKDVIIAEGMYSGVY-------KDTGKSFEAEFVHVWQL 111 (134)
T ss_dssp ESHHHHHHHTHHHHHHHEEE-EEEEEEEEEEBTTSSEEEEEEEEEEEE-------TTTCCEEEEEEEEEEEE
T ss_pred eCHHHHHHHHHHHHHhhccc-cccchhheeeecCCCEEEEEEEEeeEE-------CCCCCEeeeeEEEEEEE
Confidence 4788887 478899999998 99999988 99999999999988885 69999999999999985
No 19
>3ec9_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.60A {Burkholderia thailandensis E264} SCOP: d.17.4.10
Probab=98.23 E-value=4.7e-06 Score=61.24 Aligned_cols=61 Identities=11% Similarity=0.142 Sum_probs=55.1
Q ss_pred CChHHHH-HHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFK-SSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~-~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.|++.+. ..+..+..+||+ +.+++.+++++++.|++.|+..|++ +|||+.+++.++.++||
T Consensus 56 ~G~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~gd~v~v~~~~~~~~-------~~tG~~~~~~~~~v~~v 117 (140)
T 3ec9_A 56 RSADEIVRNVFRRLGEEWDG-YTFKLDALHDAGDTVIGVGRYSGTY-------RRTGKSFECRVAHVWRV 117 (140)
T ss_dssp CSHHHHHHHTHHHHHHHEEE-EEEEEEEEEEETTEEEEEEEEEEEE-------TTTCCEEEEEEEEEEEE
T ss_pred cCHHHHHHHHHHHHHhhCCc-ceeEEEEEEEcCCEEEEEEEEEEEE-------cCCCCEEEeEEEEEEEE
Confidence 4788894 678899999998 9999999999999999999999886 58999999999999885
No 20
>3fgy_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.59A {Burkholderia xenovorans LB400} SCOP: d.17.4.0
Probab=98.21 E-value=2.2e-06 Score=62.36 Aligned_cols=61 Identities=10% Similarity=-0.165 Sum_probs=55.9
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.|++.+...+..+..+||+ +.+++.+++++++.|++.|+..|++ +|||+++++.++.++||
T Consensus 49 ~G~~~i~~~~~~~~~~~~~-~~~~~~~~~~~gd~v~v~~~~~~~~-------~~~G~~~~~~~~~~~~~ 109 (135)
T 3fgy_A 49 RGHAALAALLQKASEMVEI-SYPEPPEFVAQGERVLVVGFATGRV-------KSTNRTFEDDWVFAITV 109 (135)
T ss_dssp EHHHHHHHHHHHHHHHEEE-ECSSCCEEEEETTEEEEEEEEEEEE-------TTTCCEEEEEEEEEEEE
T ss_pred eCHHHHHHHHHHHHHhhCc-ceeeeEEEEEcCCEEEEEEEEeEEE-------cCCCCEecccEEEEEEE
Confidence 4778999999999999998 8999999999999999999998885 79999999999999885
No 21
>3g8z_A Protein of unknown function with cystatin-like FO; NP_639274.1, snoal-like polyketide cyclase; HET: MSE; 1.90A {Xanthomonas campestris PV}
Probab=98.15 E-value=1.1e-05 Score=60.97 Aligned_cols=60 Identities=12% Similarity=0.117 Sum_probs=53.6
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEE-EEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEV-ISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEV-leV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.|++.+.+....+..+||+.|.++. .+++++|+.|+++|+..|+ ++|+.+++.|+.++||
T Consensus 64 ~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~gd~v~v~~~~~~~---------~~G~~~~~~~~~v~~~ 124 (148)
T 3g8z_A 64 RGMAVVGPMLGKMMEVSNGTFAISRADDYMASGDWVAITLEFSGQ---------ANGVTLKQAGVDLLRI 124 (148)
T ss_dssp ESHHHHHHHHHHHHHHTTTCCEEEEEEEEEEETTEEEEEEEEEEE---------ETTEEEEEEEEEEEEE
T ss_pred cCHHHHHHHHHHHHHhcCCceEEEecceEEecCCEEEEEEEEEEE---------eCCcEEEeeEEEEEEE
Confidence 4789999999999999995588885 8999999999999998886 6999999999999985
No 22
>3ff2_A Uncharacterized cystatin fold protein (YP_497570. NTF2 superfamily; structural genomics; 1.90A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=98.13 E-value=6.7e-06 Score=59.12 Aligned_cols=61 Identities=15% Similarity=0.057 Sum_probs=51.6
Q ss_pred CCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCC-CCCE--EEEEeEEEEEC
Q 043189 113 RADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAP-TGEM--VEFYGIGIMKV 182 (182)
Q Consensus 113 ~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~p-TGk~--Vei~Gi~i~rV 182 (182)
..|+++|.+.+..+..+||+ +.++++.++++||.|+++++..|+ |+ +|+. +.+.+++|+||
T Consensus 42 ~~G~~~~~~~~~~~~~~~p~-~~~~i~~~~~~Gd~V~~~~~~~~~--------~~~~G~~~~~~~~~~~ifr~ 105 (117)
T 3ff2_A 42 REGKEGTRSGLAAAFARWPQ-NHAEIKDAQQVGTYVLMREHVTRG--------PATDGSPLVEPFDVVAVYSF 105 (117)
T ss_dssp ECHHHHHHHHHHHHHHHCTT-CEEEEEEEEEETTEEEEEEEEECC--------SCSSSCCCCCCEEEEEEEEE
T ss_pred ccCHHHHHHHHHHHHhhCCC-ceEEEEEEEEECCEEEEEEEEEec--------CCCCCCcccccEEEEEEEEE
Confidence 45789999999999999999 999999999999999999987775 33 3542 67888888875
No 23
>3dm8_A Uncharacterized protein RPA4348; siras, putative isomerase, structural genomics, PSI-2, prote structure initiative; HET: CE9; 1.80A {Rhodopseudomonas palustris} SCOP: d.17.4.20
Probab=97.97 E-value=3.7e-05 Score=57.60 Aligned_cols=108 Identities=12% Similarity=0.049 Sum_probs=77.8
Q ss_pred CCHHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCccCchhhhhhcCccccccccCCCCccccCCCChHHHHH
Q 043189 42 GSIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKS 121 (182)
Q Consensus 42 gSLe~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~~~~~~G~Yn~~l~~~lp~~~~~Y~~~~e~f~~ 121 (182)
-|++++|+.+.. +.-+-|++.+.++-.+.+.+...|... + + |..+. -.|++.+.+
T Consensus 4 ~~~~~~v~~~~~-----a~~~gD~~~l~~l~a~Dv~~~~~g~~~-----~---------~--p~~g~----~~G~~av~~ 58 (143)
T 3dm8_A 4 HSLWRFSRALHR-----ALNDRQTEELATIIDDNIDWAIYGPID-----M---------F--PFFGA----RQGKAAVLE 58 (143)
T ss_dssp CHHHHHHHHHHH-----HHHHCCCHHHHHHEEEEEEEEEESCTT-----T---------C--TTCEE----EESHHHHHH
T ss_pred chHHHHHHHHHH-----HHHCCCHHHHHHhcCCCeEEEecCCCC-----c---------C--CCCcc----ccCHHHHHH
Confidence 366777777764 334566666666666666655533210 0 0 00011 247889999
Q ss_pred HHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 122 SHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 122 s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
....+..+||+ +.+++.++++++++|+..++..|+ .++||+++++.++.+++|
T Consensus 59 ~~~~~~~~~~~-~~~~~~~~~~~gd~v~v~~~~~~~-------~~~tG~~~~~~~~~~~~v 111 (143)
T 3dm8_A 59 VCRQIADSVRI-YRYHRESVMLGIDSAASMVRYSLT-------AAGTNRPISVRMALFTQF 111 (143)
T ss_dssp HHHHHHHHEEE-EEEEEEEEEECSSEEEEEEEEEEE-------ETTTCCEEEEEEEEEEEE
T ss_pred HHHHHHHhcCc-ceEEEEEEEEcCCeEEEEEEEEEE-------EeCCCCEEEEEEEEEEEE
Confidence 99999999998 999999999999999988776654 589999999999999875
No 24
>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}
Probab=97.79 E-value=7e-05 Score=63.35 Aligned_cols=66 Identities=9% Similarity=0.008 Sum_probs=55.7
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEEEEee--eCCCEEEEEEEEEee--eeccc------cccC----CCCCEEEEEeEEE
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEVISVF--SGPPVVAYKFRHWGY--FEGPF------QGHA----PTGEMVEFYGIGI 179 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~--s~pp~VafrwrhwGt--~~G~F------~G~~----pTGk~Vei~Gi~i 179 (182)
.|++.+...+..+..+ + -...+.+++ ++|+.++++|+..|+ |+|+| +|+| |+|++|++.|+++
T Consensus 179 ~G~~ai~~~~~~~~~~--~-~~~~~~~~~~~~~g~~aa~~~~~~~~y~~~g~~~~~~g~~~~~~p~~~~G~~~~~~g~~~ 255 (283)
T 3rga_A 179 TGLEALRAHATMAVGS--N-VRETAGLTVAGQDGRHAAVTVSATMDYLPSGPLLARHHLMTLPAPADPHRALIGIEYVMV 255 (283)
T ss_dssp ESHHHHHHHHHHHHHT--T-CEEEEEEEEECTTSSEEEEEEEEEEESTTHHHHHHHTTSCCSCCCSCTTTCEEEEEEEEE
T ss_pred cCHHHHHHHHHHhhcc--C-cEEEEeeEEecCCCCEEEEEEEEEEEeecccccccccccccccCCcCCCCceEEEEEEEE
Confidence 5788888888877776 3 566667766 679999999999999 88888 7888 9999999999999
Q ss_pred EEC
Q 043189 180 MKV 182 (182)
Q Consensus 180 ~rV 182 (182)
+||
T Consensus 256 ~~~ 258 (283)
T 3rga_A 256 IGV 258 (283)
T ss_dssp EEE
T ss_pred EEE
Confidence 985
No 25
>3f14_A Uncharacterized NTF2-like protein; YP_680363.1, NTF2-like protein of unknown function, structur genomics; HET: MSE TRS PGE; 1.45A {Cytophaga hutchinsonii atcc 33406}
Probab=97.79 E-value=0.00015 Score=52.24 Aligned_cols=60 Identities=5% Similarity=-0.070 Sum_probs=53.1
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.|++.|.+....+.+.+|+ ..+++..++++|+.|+..++..| ..++|+.+++..+.|+||
T Consensus 40 ~G~~~~~~~~~~~~~~~~~-~~~~i~~~i~~Gd~Vvv~~~~~~--------~~~~g~~~~~~~~~vf~~ 99 (112)
T 3f14_A 40 KGKADVIDFCNKMLPEMKG-AVLTNDNVIQNENQIVIEGKCRY--------FDAEGKEAFVSYCDIYRF 99 (112)
T ss_dssp ESHHHHHHHHHHHHHHHHT-SEEEEEEEEECSSEEEEEEEEEE--------ECTTSCEEEEEEEEEEEE
T ss_pred ecHHHHHHHHHHHHhhcCC-cEEEEEEEEEeCCEEEEEEEEEE--------EeCCCCEEEEEEEEEEEE
Confidence 3678999999999999997 99999999999999999987654 468999999999999885
No 26
>1nww_A Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {Rhodococcus erythropolis} SCOP: d.17.4.8 PDB: 1nu3_A*
Probab=97.74 E-value=0.00019 Score=52.98 Aligned_cols=60 Identities=13% Similarity=0.130 Sum_probs=53.2
Q ss_pred CChHHHHHHHHHHHHhCCCCc-eeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFKSSHDAFRSAFPRGF-AWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf-~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.|++.+.+....+..+|| + .+++.+++++|+.|+..|+..|++ +|+|+.+++.++.+++|
T Consensus 62 ~G~~~i~~~~~~~~~~~~--~~~~~~~~~~~~gd~v~~~~~~~~~~-------~~~G~~~~~~~~~~~~~ 122 (149)
T 1nww_A 62 YGRDAVEQTLAGLFTVMS--IDAVETFHIGSSNGLVYTERVDVLRA-------LPTGKSYNLSILGVFQL 122 (149)
T ss_dssp ESHHHHHHHHHHHHHHEE--EEEEEEEEEEEETTEEEEEEEEEEEE-------TTTCCEEEEEEEEEEEE
T ss_pred cCHHHHHHHHHHHHhhCC--cceEEEEEEEecCCEEEEEEEEEEEE-------cCCCCEEEEeeEEEEEE
Confidence 378899999999999998 7 899999999999999988877764 68999999999999875
No 27
>2k54_A Protein ATU0742; protein of unknown function, structural genomics, PSI-2, Pro structure initiative; NMR {Agrobacterium tumefaciens str} SCOP: d.17.4.29
Probab=97.69 E-value=0.00012 Score=52.71 Aligned_cols=58 Identities=17% Similarity=0.053 Sum_probs=48.7
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.|++.+.+....+..+ |+ +.+++++++++|++|+.+|+.+|+ +|+|+. ++.++.|+||
T Consensus 44 ~G~~ai~~~~~~~~~~-~~-~~~~~~~~~~~gd~v~~~~~~~g~--------~~~~~~-~~~~~~vf~v 101 (123)
T 2k54_A 44 GNAAEIRVRHIERFKE-PD-LYGELLTRVIVGNVVIDHETVTRN--------FPEGKG-EVDVACIYEV 101 (123)
T ss_dssp ESHHHHHHHHHHHTTC-TT-CEEEEEEEEEETTEEEEEEEEECC--------BTTBCC-EEEEEEEEEE
T ss_pred CCHHHHHHHHHHHcCC-CC-cEEEEEEEEEECCEEEEEEEEEeE--------CCCCce-EEEEEEEEEE
Confidence 4788999999887777 98 999999999999999999998765 355554 8888888875
No 28
>1s5a_A Hypothetical protein YESE; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Bacillus subtilis} SCOP: d.17.4.10
Probab=97.66 E-value=5.3e-05 Score=55.54 Aligned_cols=61 Identities=10% Similarity=0.048 Sum_probs=53.4
Q ss_pred CChHHHHHHHHHHHHhCCCCcee--EEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAW--EVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~w--EVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.|++.+...+..+..+||+ +.+ +++.++++|+.|++.|+..|+ ++|+|+++++.++.+++|
T Consensus 55 ~G~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~gd~v~~~~~~~~~-------~~~~G~~~~~~~~~~~~~ 117 (150)
T 1s5a_A 55 EGKAAIYDYIKDYPKQIHL-SSFTAPTVYRSADSNTVIAEFQCDGH-------VIETGLPYRQSYISVIET 117 (150)
T ss_dssp ESHHHHHHHHTTHHHHEEE-EEECCCEEEEBSSSSEEEEEEEEEEE-------ETTTCCBCCCEEEEEEEE
T ss_pred cCHHHHHHHHHHhhhcCCc-ccceeEEEEEecCCCEEEEEEEEEEE-------EcCCCCEEEEEEEEEEEE
Confidence 4788899999989999998 777 777888999999999999887 578999999999998875
No 29
>1oh0_A Steroid delta-isomerase; ketosteroid isomerase, KSI, equilenin, PI, LBHB; HET: EQU; 1.1A {Pseudomonas putida} SCOP: d.17.4.3 PDB: 1e3v_A* 1opy_A 1dmq_A 1dmm_A 1ea2_A 3cpo_A 1e3r_A* 1ogx_A 2inx_A 2pzv_A 1c7h_A 1dmn_A 1k41_A 1oho_A* 3fzw_A* 1cqs_A* 1w00_A 1e97_A 1w6y_A* 3ipt_A* ...
Probab=97.54 E-value=0.00013 Score=52.13 Aligned_cols=59 Identities=15% Similarity=-0.071 Sum_probs=51.9
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEE-EEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVV-AYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~V-afrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.|++.+.+....+..+||+ +.+++.+++..|+.+ ++.|+..|+ ++|+++.+.|+.+++|
T Consensus 48 ~G~~~i~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~---------~~G~~~~~~~~~~~~~ 107 (131)
T 1oh0_A 48 HGREQIAAFYRQGLGGGKV-RACLTGPVRASHNGCGAMPFRVEMV---------WNGQPCALDVIDVMRF 107 (131)
T ss_dssp EHHHHHHHHHHHHHSSSCC-EEEESSCCEECSSSEEEEEEEEEEE---------SSSSEEEEEEEEEEEE
T ss_pred ccHHHHHHHHHHHhhccce-eEeecceEEECCCeEEEEEEEEEEE---------eCCcEEEEEEEEEEEE
Confidence 4678899999999999998 999999999999999 999987663 4899999999999875
No 30
>2a15_A Hypothetical protein RV0760C; beta-alpha-barrel, structural genomics, PSI, protein structure initiative; 1.68A {Mycobacterium tuberculosis} SCOP: d.17.4.3 PDB: 2z76_A* 2z77_A* 2z7a_A
Probab=97.35 E-value=0.0012 Score=48.03 Aligned_cols=59 Identities=20% Similarity=0.142 Sum_probs=49.5
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEEEE--eeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEVIS--VFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEVle--V~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.|++.+......+..+| + +.+++.+ +...|+.|++.|+..+++ |+|+++.+.|+.++||
T Consensus 55 ~G~~ai~~~~~~~~~~~-~-~~~~~~~~~i~~~g~~~~~~~~~~~~~--------~~G~~~~~~~~~~~~~ 115 (139)
T 2a15_A 55 KGKEAVGAFFDTHIAAN-R-LTVTCEETFPSSSPDEIAHILVLHSEF--------DGGFTSEVRGVFTYRV 115 (139)
T ss_dssp ESHHHHHHHHHHHTTTT-T-CEEEEEEEEECSSTTEEEEEEEEEEEE--------TTTEEEEEEEEEEEEE
T ss_pred ecHHHHHHHHHHhcccc-e-eEEeccCceEeecCCEEEEEEEEEEEe--------CCCCEEEEEEEEEEEE
Confidence 57889999999888888 6 8998874 338999999999977653 7999999999999875
No 31
>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas testosteroni} SCOP: d.17.4.3 PDB: 1qjg_A* 8cho_A* 1ohs_A* 1ocv_A 1isk_A 3nuv_A* 1ogz_A* 3nhx_A* 3m8c_A* 3nxj_A* 3myt_A* 3mki_A 3mhe_A 1buq_A* 3nbr_A* 3t8u_A 3ov4_A* 3nm2_A
Probab=97.28 E-value=0.00043 Score=48.07 Aligned_cols=57 Identities=11% Similarity=-0.026 Sum_probs=47.5
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEEE-EeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEVI-SVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEVl-eV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.|++.+......+..+||+ +++. +++.+|+.|++.|+..|++ +|+.+.+.++.+++|
T Consensus 46 ~G~~~i~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~ 103 (125)
T 1ohp_A 46 SGTAAIREFYANSLKLPLA---VELTQEVRAVANEAAFAFIVSFEY---------QGRKTVVAPIDHFRF 103 (125)
T ss_dssp ESHHHHHHHHHHHTSSCCE---EEECSCCEEETTEEEEEEEEEEEE---------TTEEEEECCEEEEEE
T ss_pred cCHHHHHHHHHHhcccCce---EEEeeeEEEeCCEEEEEEEEEEEe---------cCceEEEEEEEEEEE
Confidence 4778888888888888884 6688 9999999999999988865 678888888888774
No 32
>1tuh_A BAL32A, hypothetical protein EGC068; unknown function; 1.85A {Uncultured bacterium} SCOP: d.17.4.11
Probab=97.22 E-value=0.0022 Score=47.97 Aligned_cols=101 Identities=12% Similarity=0.145 Sum_probs=69.3
Q ss_pred HHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCccCchhhhhhcCccccccccCCCCccccCCCChHHHHHHH
Q 043189 44 IEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSSH 123 (182)
Q Consensus 44 Le~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~~~~~~G~Yn~~l~~~lp~~~~~Y~~~~e~f~~s~ 123 (182)
..++|+.++..| -.-|++.+.++-.+.+.+..-++.+.. +. -.|++.+.+.+
T Consensus 31 ~~~~v~~~~~a~-----~~gD~~~l~~l~a~D~~~~~~~~~~~~-------------------g~----~~G~~~i~~~~ 82 (156)
T 1tuh_A 31 NAETVRRGYAAF-----NSGDMKTLTELFDENASWHTPGRSRIA-------------------GD----HKGREAIFAQF 82 (156)
T ss_dssp HHHHHHHHHHHH-----HHTCHHHHHHHEEEEEEEEECSSSTTC-------------------EE----EESHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCCCHHHHHHhcCCCEEEEccCCCCcc-------------------ce----EcCHHHHHHHH
Confidence 345666666544 344666665555555555444332210 00 23778888888
Q ss_pred HHHHHhCCC-CceeEEEEeeeCCC-EEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 124 DAFRSAFPR-GFAWEVISVFSGPP-VVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 124 ~~f~~AFPd-Gf~wEVleV~s~pp-~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
..+ .++|+ ++.+++.+++++++ .|+..|+. |++. +|+.+++.++.+++|
T Consensus 83 ~~~-~~~~~~~~~~~i~~~~~~gd~~v~~~~~~-~~~~--------~G~~~~~~~~~~~~~ 133 (156)
T 1tuh_A 83 GRY-GGETGGTFKAVLLHVLKSDDGRVIGIHRN-TAER--------GGKRLDVGCCIVFEF 133 (156)
T ss_dssp HHH-HHTTTTCCEEEEEEEEECTTSCEEEEEEE-EEEE--------TTEEEEEEEEEEEEE
T ss_pred HHH-HhhcCCceEEEEEEEEEcCCCEEEEEEEE-EEec--------CCcEEeeeeEEEEEE
Confidence 886 56663 39999999999999 99999998 7763 599999999999875
No 33
>3jum_A Phenazine biosynthesis protein A/B; chirality, drug design, medicinal CH inhibitor, biosynthetic protein; HET: AOD; 1.45A {Burkholderia SP} PDB: 3b4o_A* 3b4p_A* 3dzl_A* 3ex9_A 3cnm_A* 3jun_A* 3juo_A* 3jup_A* 3juq_A*
Probab=97.21 E-value=0.0019 Score=52.67 Aligned_cols=62 Identities=16% Similarity=0.142 Sum_probs=55.3
Q ss_pred CCChHHHHHHHHHHHHhCCCCceeEEEEee--eCCCEEEEEEEEEeeeeccccccCCCCCE---EEEEeEEEEEC
Q 043189 113 RADEETFKSSHDAFRSAFPRGFAWEVISVF--SGPPVVAYKFRHWGYFEGPFQGHAPTGEM---VEFYGIGIMKV 182 (182)
Q Consensus 113 ~~~~e~f~~s~~~f~~AFPdGf~wEVleV~--s~pp~VafrwrhwGt~~G~F~G~~pTGk~---Vei~Gi~i~rV 182 (182)
-.|++.+...+..+..+||+ +.|..+.++ ++|+.|++.++..|+ +.+||+. ++...+.|++|
T Consensus 84 ~~GReai~~~~~~~~~~~~d-~~~~~~~v~~taDpd~VvvE~~~~Gt-------v~~TGkp~~~Y~~~yi~V~rV 150 (185)
T 3jum_A 84 IRGREKLGEHAVWSLQCFPD-WVWTDIQIFETQDPNWFWVECRGEGA-------IVFPGYPRGQYRNHFLHSFRF 150 (185)
T ss_dssp EESHHHHHHHHHHHHHHSTT-CEEEEEEEECCSSTTEEEEEEEEEEE-------ECCTTSCCEEEEEEEEEEEEE
T ss_pred ccCHHHHHHHHHHHHhhCCC-CeeeEEEEEEecCCCEEEEEEEEEEE-------EcCCCCccceEEEeEEEEEEE
Confidence 45899999999999999999 999988884 589999999998877 8899998 99999999885
No 34
>3ff0_A Phenazine biosynthesis protein PHZB 2; cystatin-like fold, antibiotic biosynthesis, virulence, STRU genomics; 1.90A {Pseudomonas aeruginosa}
Probab=97.09 E-value=0.0036 Score=50.23 Aligned_cols=62 Identities=16% Similarity=0.144 Sum_probs=55.0
Q ss_pred CCChHHHHHHHHHHHHhCCCCceeEEEEee--eCCCEEEEEEEEEeeeeccccccCCCCCE---EEEEeEEEEEC
Q 043189 113 RADEETFKSSHDAFRSAFPRGFAWEVISVF--SGPPVVAYKFRHWGYFEGPFQGHAPTGEM---VEFYGIGIMKV 182 (182)
Q Consensus 113 ~~~~e~f~~s~~~f~~AFPdGf~wEVleV~--s~pp~VafrwrhwGt~~G~F~G~~pTGk~---Vei~Gi~i~rV 182 (182)
-.|++.+.+....+..+||+ +.|..+.++ ++|++|++.|+..|+ +.+||+. .+...+.+++|
T Consensus 62 ~~Gre~l~~~~~~~~~~~~~-~~~~~~~i~~t~Dpd~vvvE~~~~g~-------i~~tG~~~~~y~~~yi~v~~v 128 (163)
T 3ff0_A 62 IRGKDKLAEHAVWSLKCFPD-WEWYNIKVFETDDPNHFWVECDGHGK-------ILFPGYPEGYYENHFLHSFEL 128 (163)
T ss_dssp EESHHHHHHHHHHHHHHSTT-CEEEEEEEEEBSSTTEEEEEEEEEEE-------ECCTTSCCEEEEEEEEEEEEE
T ss_pred eecHHHHHHHHHHHHhhCCC-ceeeeEEEEEcCCCCEEEEEEEEEEE-------EcCCCcccccEEEeEEEEEEE
Confidence 45899999999999999999 999987776 678899999999888 5889999 99999999875
No 35
>1z1s_A Hypothetical protein PA3332; beta barrel, conserved hypothetical protein, structural genomics, PSI, protein structure initiative; HET: PGE; 1.49A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.10
Probab=96.98 E-value=0.00055 Score=52.18 Aligned_cols=60 Identities=13% Similarity=0.118 Sum_probs=48.6
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEE--EEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEV--ISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEV--leV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.|++.+.+....+..+||+ . ++. ..+.++++.|+..|+..|++ ++||+.+++.|+.++||
T Consensus 68 ~G~~ai~~~~~~~~~~~~~-~-~~~~~~~~~~~g~~vv~~~~~~g~~-------~~tG~~~~~~~~~v~~v 129 (163)
T 1z1s_A 68 EGRETIWAHMRLFPEHLTV-R-FTDVQFYETADPDLAIGEFHGDGVA-------TVSGGKLAQDYISVLRT 129 (163)
T ss_dssp ESHHHHHHTTTTGGGTEEE-E-ECCCEEECCSSTTEEEEEEEEEEEE-------TTTCCEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhCcc-c-eeeeEEEEEeCCCEEEEEEEEEEEE-------eCCCCEEccceEEEEEe
Confidence 4778888888888888887 5 321 23448999999999999884 78999999999999885
No 36
>3g16_A Uncharacterized protein with cystatin-like fold; YP_001022489.1, protein of unknown function with cystatin-LI structural genomics; HET: MSE; 1.45A {Methylibium petroleiphilum PM1}
Probab=96.96 E-value=0.0024 Score=50.63 Aligned_cols=55 Identities=7% Similarity=0.123 Sum_probs=46.7
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEEEEeeeC--CCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEE
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSG--PPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMK 181 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~--pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~r 181 (182)
.|++.+...+..+..+| + ..|++..++.. +++++..|+++||..| +++.|+.+++
T Consensus 53 ~Greai~~~f~~~~~~~-d-~~~~~e~i~v~~dG~~av~Ewt~~~T~~g-----------~~~~~~~~f~ 109 (156)
T 3g16_A 53 RGAAQIAHRWRTAVETL-G-SYWTIDALVIDAETAEAAIEWTHFKTNQD-----------KVLRGAECVE 109 (156)
T ss_dssp ESHHHHHHHHHHHHHHH-C-EEEEEEEEEEETTTTEEEEEEEEEEGGGT-----------EEEEEEEEEE
T ss_pred cCHHHHHHHHHHHHhhc-C-ceEEEEEEEEecCCCEEEEEEEEEEeCCC-----------eeEecceEEE
Confidence 48999999999999998 5 89999999998 9999999999999776 5566666643
No 37
>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264}
Probab=96.76 E-value=0.0035 Score=45.13 Aligned_cols=39 Identities=21% Similarity=0.317 Sum_probs=36.1
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEE
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFR 153 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwr 153 (182)
.|++.+......+..+||+ +.+++++++++++.+++.|+
T Consensus 56 ~G~~ai~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 94 (122)
T 3h3h_A 56 RGKEQVGAYWREALRMIPD-LHFEWIATLAGVDSVAIHYR 94 (122)
T ss_dssp EHHHHHHHHHHHHHHHCTT-CCCEEEEEEECSSEEEEEEE
T ss_pred EcHHHHHHHHHHHHHHCCC-cEEEEEEEEecCcEEEEEEE
Confidence 4788999999999999999 99999999999999999887
No 38
>3dxo_A Uncharacterized snoal-like protein; putative isomerase of the snoal-like family; HET: MSE PGE; 2.70A {Agrobacterium tumefaciens str} SCOP: d.17.4.19
Probab=96.73 E-value=0.0082 Score=43.80 Aligned_cols=58 Identities=14% Similarity=0.246 Sum_probs=49.6
Q ss_pred CCChHHHHHHHHHHHHhCCCCceeEEE-EeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 113 RADEETFKSSHDAFRSAFPRGFAWEVI-SVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 113 ~~~~e~f~~s~~~f~~AFPdGf~wEVl-eV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
-.|++.+...+..+..+||+ +.+++. ++...++.+.|+|+.. +++| .+.+.|++++++
T Consensus 45 ~~G~~ai~~~~~~~~~~~~~-~~f~~~~~~~~~~~~~~~~w~~~----------~~~g-~~~~~G~d~l~~ 103 (121)
T 3dxo_A 45 GEGQQGIAAMIEAARQKFPG-YRFVLAGTPDGHGNFTRFSWRLI----------SPDG-DDVAGGTDVVSL 103 (121)
T ss_dssp EEHHHHHHHHHHHHHHHSTT-CEEEEEEEEEEETTEEEEEEEEE----------CTTS-CEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHCCC-cEEEEccCcceeCCEEEEEEEEe----------CCCC-CceeeEEEEEEE
Confidence 46889999999999999998 999998 8899999999999853 4556 467999999874
No 39
>3dmc_A NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, unknow function; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.17.4.10
Probab=96.62 E-value=0.018 Score=42.92 Aligned_cols=59 Identities=22% Similarity=0.227 Sum_probs=49.2
Q ss_pred ChHHHHHHHHHHHHhCCCCceeE-EEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 115 DEETFKSSHDAFRSAFPRGFAWE-VISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 115 ~~e~f~~s~~~f~~AFPdGf~wE-VleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
|++.+.+.+..+...|+.++..+ |..+.++|++|++.|+..|+.. |+.++...+.+++|
T Consensus 56 G~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~G~~vvve~~~~g~~~---------g~~y~~~~~~~f~v 115 (134)
T 3dmc_A 56 GKERAKEFFTYVSESFHTGIQISSLDRVTSNETTVVFEFRDEGLFL---------GKPYKNRVAVSFDV 115 (134)
T ss_dssp SHHHHHHHHHHHHHTCTTCEEEEEEEEEEECSSEEEEEEEEEEEET---------TEEEEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHHhhcCCceeEEEEEEEecCCEEEEEEEEEEEEc---------CcEeeccEEEEEEE
Confidence 78899999999999999779999 9999999999999999888873 36676666666553
No 40
>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}
Probab=96.61 E-value=0.003 Score=53.32 Aligned_cols=62 Identities=10% Similarity=-0.073 Sum_probs=52.3
Q ss_pred CCChHHHHHHHHHHHHhCCCCceeEEEEee--eCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 113 RADEETFKSSHDAFRSAFPRGFAWEVISVF--SGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 113 ~~~~e~f~~s~~~f~~AFPdGf~wEVleV~--s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
-.|++.+...+..+...|.. .++.+++ ++|+.|+++|+..+++. -.|+|++|++.|++++||
T Consensus 46 ~~Gr~ai~~~~~~~~~~~~~---~~~~~~~~~~~G~~v~~~~~~~~~~~-----g~~~g~~v~~~gi~v~r~ 109 (283)
T 3rga_A 46 VVGRAALAARLAPALRGAVH---EEPGRPYAAHDGTSVVLPATVTVGAP-----GAPPQRRGRTRVMGVIEV 109 (283)
T ss_dssp EESHHHHHHHHHHHHHTTCE---EEECCCBCCSSSSEEEEEEEEEECST-----TCCGGGCEEEEEEEEEEE
T ss_pred cCcHHHHHHHHHHHHhhcCc---eEEEEEEeeeeCCEEEEEEEEEEEeC-----CCCccceEEEEEEEEEEE
Confidence 36889999988888888865 5688887 89999999999888743 378999999999999985
No 41
>2bng_A MB2760; epoxide hydrolase, limonene, hydrolase, structural proteomics in europe, spine, structural genomics; 2.5A {Mycobacterium tuberculosis} SCOP: d.17.4.8
Probab=96.55 E-value=0.0068 Score=44.89 Aligned_cols=58 Identities=10% Similarity=0.062 Sum_probs=46.4
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.|++.+......+..+| + +.+++.+++++|+.|+..++..+++ +|+++.+.++.+++|
T Consensus 55 ~G~~~i~~~~~~~~~~~-~-~~~~i~~~~~~g~~vv~~~~~~~~~---------~G~~~~~~~~~~~~v 112 (149)
T 2bng_A 55 RGGRRTATLLRRMQGRV-G-FEVKIHRIGADGAAVLTERTDALII---------GPLRVQFWVCGVFEV 112 (149)
T ss_dssp ECHHHHHHHHHTTTTTC-E-EEEEEEEEEEETTEEEEEEEEEEEE---------TTEEEEEEEEEEEEE
T ss_pred cCHHHHHHHHHHHHhhc-C-cEEEEEEEEEeCCEEEEEEEEEEEE---------CCeEEEEEEEEEEEE
Confidence 36778888887777777 5 8999999999999998877644443 488899999998875
No 42
>1tp6_A Hypothetical protein PA1314; structural genomics, alpha-beta sandwich, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.12
Probab=94.48 E-value=0.063 Score=39.90 Aligned_cols=47 Identities=11% Similarity=0.017 Sum_probs=41.7
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEEEEeee---CCCEEEEEEEEEeeeecc
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEVISVFS---GPPVVAYKFRHWGYFEGP 161 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s---~pp~VafrwrhwGt~~G~ 161 (182)
-+.+........++.+||+ |..+|.++.. +++.++.+|+-|+++.|.
T Consensus 50 ~g~~~~~~~~~~~~g~~pg-l~i~i~~l~~~~~~~d~~vv~y~~~~~~~~~ 99 (128)
T 1tp6_A 50 LDKTALGELFRSKGGTRPG-LRIEIDGESLLASGVDGATLAYREIQSDAAG 99 (128)
T ss_dssp EEHHHHHHHHHHHTTCSTT-CEEEEEEEEEEEEETTEEEEEEEEEEEETTE
T ss_pred CCHHHHHHHHHHhhCCCCC-eEEEEEEEEEEeecCCEEEEEEEEEeccCCc
Confidence 3567788888889999996 9999999999 999999999999998776
No 43
>3lyg_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE GOL; 1.61A {Colwellia psychrerythraea}
Probab=93.99 E-value=0.065 Score=41.48 Aligned_cols=43 Identities=16% Similarity=0.252 Sum_probs=39.0
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEE
Q 043189 109 FQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYK 151 (182)
Q Consensus 109 ~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafr 151 (182)
+.-+-.|+++|.+.+..+-.++|+||..+++-++++++.|+--
T Consensus 38 sa~vl~GR~~~r~a~~~L~~~lP~g~~It~lR~i~ggn~VVSe 80 (120)
T 3lyg_A 38 QADVLKGRQAFRSALDNLGEILPPGFEITGLRQLEGENEIVSI 80 (120)
T ss_dssp TTCEEESHHHHHHHHTTHHHHSCTTCEEEEEEEEECSSEEEEE
T ss_pred ccceeecHHHHHHHHHHHHhhCCCCceeeeEEEecCCCEEEEE
Confidence 3457889999999999999999999999999999999999853
No 44
>3hx8_A MLR2180 protein, putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE UNL PG4; 1.45A {Mesorhizobium loti}
Probab=93.30 E-value=0.81 Score=31.66 Aligned_cols=101 Identities=6% Similarity=-0.032 Sum_probs=62.6
Q ss_pred CHHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCccCchhhhhhcCccccccccCCCCccccCCCChHHHHHH
Q 043189 43 SIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSS 122 (182)
Q Consensus 43 SLe~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~~~~~~G~Yn~~l~~~lp~~~~~Y~~~~e~f~~s 122 (182)
+|++-|+.|+..|. ++.-.-|++.+.++=.+.-.+.-.++.. -.|++.+.+.
T Consensus 3 ~~~~~I~~~~~~~~-~a~~~~D~~~~~~l~a~Da~~~~~~~~~---------------------------~~G~~~i~~~ 54 (129)
T 3hx8_A 3 SAKEAIEAANADFV-KAYNSKDAAGVASKYMDDAAAFPPDMAR---------------------------VDGRQNIQKL 54 (129)
T ss_dssp CHHHHHHHHHHHHH-HHHHTTCHHHHHTTEEEEEEEECTTSCC---------------------------EESHHHHHHH
T ss_pred hHHHHHHHHHHHHH-HHHHcCCHHHHHHhhCCCeEEeCCCCCc---------------------------ccCHHHHHHH
Confidence 57777777777775 3544555555544433333221111110 2356666666
Q ss_pred HHHHHH-hCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEE
Q 043189 123 HDAFRS-AFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIG 178 (182)
Q Consensus 123 ~~~f~~-AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~ 178 (182)
+..+.. .+++ +.+++++|...|+.++..++..++.. .++|+.+.+.|..
T Consensus 55 ~~~~~~~~~~~-~~~~~~~v~~~gd~A~~~~~~~~~~~------~~~G~~~~~~g~~ 104 (129)
T 3hx8_A 55 WQGAMDMGISE-LKLTTLDVQESGDFAFESGSFSLKAP------GKDSKLVDAAGKY 104 (129)
T ss_dssp HHHHHHTTCEE-EEEEEEEEEEETTEEEEEEEEEEEEE------CTTSCEEEEEEEE
T ss_pred HHHHHhCCCce-EEEEEEEEEcCCCEEEEEEEEEEEee------CCCCCeeeeeEEE
Confidence 665444 3466 88899999999999999887776642 5789988766653
No 45
>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.40A {Pectobacterium atrosepticum} SCOP: d.17.4.27
Probab=92.08 E-value=1.2 Score=31.18 Aligned_cols=57 Identities=11% Similarity=-0.005 Sum_probs=41.5
Q ss_pred ChHHHHHHHHHHHHhCCCCceeEEEEeee-CCCEEEEEEEEEeeeeccccccCCCCCEEEEEe
Q 043189 115 DEETFKSSHDAFRSAFPRGFAWEVISVFS-GPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYG 176 (182)
Q Consensus 115 ~~e~f~~s~~~f~~AFPdGf~wEVleV~s-~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~G 176 (182)
|++.+.+++..+...++..+.++++++.. +|+.++.+++..++++++ .+|..+...+
T Consensus 52 G~~ai~~~~~~~~~~~~~~~~~~~~~i~~~~gd~a~~~~~~~~~~~~~-----~~g~~~~~~~ 109 (135)
T 3d9r_A 52 GKDELAEVYLSVFETVGFDMAYEIKEVVQTSADWAFVRSATEGTETNK-----ATGVVTPAAY 109 (135)
T ss_dssp SHHHHHHHHHHHHHHEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEET-----TTCCEEEEEE
T ss_pred CHHHHHHHHHHHHhhcCCceeEEEEEEEEecCCEEEEEEEEEEEEecC-----CCCCceeecc
Confidence 67888888887776665237889999877 889999999888887643 2455555433
No 46
>3en8_A Uncharacterized NTF-2 like protein; YP_553245.1, NTF-2 like protein of unknown function, structu genomics; HET: MSE PG4; 1.85A {Burkholderia xenovorans LB400} SCOP: d.17.4.20
Probab=91.27 E-value=0.97 Score=33.00 Aligned_cols=51 Identities=20% Similarity=0.240 Sum_probs=37.6
Q ss_pred ChHHHHHHHHHHHHhCCCCce-eEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 115 DEETFKSSHDAFRSAFPRGFA-WEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 115 ~~e~f~~s~~~f~~AFPdGf~-wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
|++.|.. |...||+... ++|+.+.++|+.|++.++... +| +.+.++.|++|
T Consensus 47 Gr~~~~~----~~~~~~~~~~~~~i~~~~a~G~~vv~~~~~~~-----------~g--~~~~~~~v~~v 98 (128)
T 3en8_A 47 GRMNLQA----LRSHHPGKPAGFEVRRIQGEGNLWITEYSISY-----------NG--RPAYTVSIMEF 98 (128)
T ss_dssp SHHHHHH----HHHHTTCSCSEEEEEEEEEETTEEEEEEEEEE-----------TT--EEEEEEEEEEE
T ss_pred CHHHHHH----HHHHCCCCCcceEEEEEEECCCEEEEEEEEec-----------CC--EEEEEEEEEEE
Confidence 5666554 5678998434 899999999999999998642 23 46777777764
No 47
>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}
Probab=88.55 E-value=1.8 Score=32.30 Aligned_cols=53 Identities=17% Similarity=0.283 Sum_probs=38.1
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEEEEeee--CCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEVISVFS--GPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV 182 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s--~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV 182 (182)
.|++.+...+..+.+.||+ | ++..++. ++..++..|+.. . | |+ ++.|+++++|
T Consensus 50 ~G~~~v~~~~~~~~~~~~~-f--~~~~~~~~~dg~~~~~~f~~~--~-~--------g~--~v~Gv~v~~~ 104 (143)
T 3mso_A 50 AGAPVVSMILNTVLTVFED-F--AYHRQLASADGRSVVLEFSAR--V-G--------ER--ELKGIDMIRF 104 (143)
T ss_dssp ESHHHHHHHHHHHHHHCEE-E--EEEEEEEETTSSEEEEEEEEE--E-T--------TE--EEEEEEEEEE
T ss_pred cCHHHHHHHHHHHHhhCCc-e--EEEEEEEccCCCEEEEEEEEE--E-C--------CE--EEEEEEEEEE
Confidence 5889999999999999996 5 5555554 788888888743 2 1 33 6677776654
No 48
>3f8x_A Putative delta-5-3-ketosteroid isomerase; structural genomics, joint center for structural genomics; HET: MSE; 1.55A {Pectobacterium atrosepticum SCRI1043}
Probab=80.06 E-value=7.6 Score=29.50 Aligned_cols=84 Identities=13% Similarity=0.126 Sum_probs=53.2
Q ss_pred CCHHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCccCchhhhhhcCccccccccCCCCccccCCCChHHHHH
Q 043189 42 GSIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKS 121 (182)
Q Consensus 42 gSLe~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~~~~~~G~Yn~~l~~~lp~~~~~Y~~~~e~f~~ 121 (182)
++|.+.++.+++.|- ++.-+-|++.+..+-.+...+.- |... .+ -.|++.+..
T Consensus 16 ~~~~~~~~~~l~~f~-~a~~~gD~~aL~~LlA~Dvv~~~-----------------------P~~~-~~--~~G~~av~~ 68 (148)
T 3f8x_A 16 TSPNAAVQSGLQEWH-RIIAEADWERLPDLLAEDVVFSN-----------------------PSTF-DP--YHGKGPLMV 68 (148)
T ss_dssp -CCCHHHHHHHHHHH-HHHHHTCGGGSGGGEEEEEEEEC-----------------------SSCS-SC--EESHHHHHH
T ss_pred cchhHHHHHHHHHHH-HHHHcCCHHHHHHHhCCCEEEEC-----------------------CCCC-CC--cCCHHHHHH
Confidence 357777777777773 35555666666555444444332 2111 01 248899999
Q ss_pred HHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEE
Q 043189 122 SHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHW 155 (182)
Q Consensus 122 s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrhw 155 (182)
.+....+.||+ | ++...+..++..++.|+.+
T Consensus 69 ~~~~~~~~~~~-f--~~~~~~~~g~~~~l~f~~~ 99 (148)
T 3f8x_A 69 ILPAVFSVLEN-F--QYARHFSSKSGYVLEFNAN 99 (148)
T ss_dssp HHHHHHHHCEE-E--EEEEEEECSSEEEEEEEEE
T ss_pred HHHHHHhhCCC-E--EEEEEEEeCCeEEEEEEEE
Confidence 99998899998 6 4556666777778888854
No 49
>3gb3_A Killerred; fluorescent protein, genetically encoded photosensitizer, phototoxicity; HET: CRQ; 1.75A {Anthomedusae SP} PDB: 3gl4_A* 4b30_A* 2wiq_A* 2wis_A* 3a8s_A*
Probab=76.43 E-value=4.2 Score=34.50 Aligned_cols=58 Identities=12% Similarity=0.232 Sum_probs=38.8
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEE---eeeeccc--c--ccCCCC
Q 043189 109 FQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHW---GYFEGPF--Q--GHAPTG 169 (182)
Q Consensus 109 ~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrhw---Gt~~G~F--~--G~~pTG 169 (182)
++.|..-+++.. .-|+.|||+|+.||=.-.|.++-.+..+.+.. +.+.+.+ . |+||+|
T Consensus 66 ~r~F~kYP~~i~---dyFK~sfPeGys~eRt~~fEDGGv~t~~~~isleg~~~~~~v~~~G~nFP~dG 130 (235)
T 3gb3_A 66 EPFFARYPDGIS---HFAQECFPEGLSIDRTVRFENDGTMTSHHTYELDDTCVVSRITVNCDGFQPDG 130 (235)
T ss_dssp CGGGSBCCTTSC---CHHHHTTTTCEEEEEEEEETTSCEEEEEEEEEEETTEEEEEEEEEEESCCTTS
T ss_pred ccccccCCCCCC---CHHHHhCCCCeeEEEEEEECCCcEEEEEEEEEEECCEEEEEEEEEeeCCCCCC
Confidence 444444444433 34689999999999999999998888877664 2233322 2 567776
No 50
>3rob_A Uncharacterized conserved protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.48A {Planctomyces limnophilus}
Probab=74.19 E-value=17 Score=26.88 Aligned_cols=58 Identities=10% Similarity=0.024 Sum_probs=40.0
Q ss_pred ChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCC-CCCEEEEEeEE
Q 043189 115 DEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAP-TGEMVEFYGIG 178 (182)
Q Consensus 115 ~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~p-TGk~Vei~Gi~ 178 (182)
+++.|.+........++-+...++.++.-.||....+++...+.+ +| +|+.+.+.|..
T Consensus 57 Gr~ai~a~~~~~~~~~~~~~~~~~~~i~v~GD~A~~~~~~~~~~t------~~~~g~~~~~~g~~ 115 (139)
T 3rob_A 57 GKEEFLAACEQNDQRVIIEASATFEEIVIVEPMAYTRTHLHIKVT------PRSGGAVRELAGHA 115 (139)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEEEETTEEEEEEEEEEEEE------ETTSCCCEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCceEEEEEEEcCCeEEEEEEEEEEEe------cCCCCceeEeeccE
Confidence 667777776666666664477888888778887777666555544 34 78888777543
No 51
>3flj_A Uncharacterized protein conserved in bacteria WIT cystatin-like fold; YP_168589.1; HET: MSE; 2.00A {Silicibacter pomeroyi dss-3}
Probab=72.80 E-value=5.9 Score=30.91 Aligned_cols=39 Identities=10% Similarity=0.198 Sum_probs=31.5
Q ss_pred CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEE
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHW 155 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrhw 155 (182)
.|++.+........+.||+ |.++ ..+.+|+.+++.|+..
T Consensus 59 ~Gr~av~~~l~~~~~~~~d-f~~~--~~~v~G~~avl~f~~~ 97 (155)
T 3flj_A 59 TGRDPVAAVLGHVGQVFSE-FRYR--RIMGEGKDWALEFQCK 97 (155)
T ss_dssp ESHHHHHHHHHHHHHHEEE-EEEE--EEEEETTEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHhhCCC-cEEE--EEEEcCCEEEEEEEEE
Confidence 4889999999999999998 7655 4457899999998854
No 52
>2ejo_A Fluorescent protein; GFP-like protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: CFY; 1.65A {Fungia concinna} PDB: 2ejp_A* 2zmu_A* 2zmw_A* 3mgf_A*
Probab=72.73 E-value=6 Score=33.31 Aligned_cols=44 Identities=23% Similarity=0.372 Sum_probs=32.2
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEE
Q 043189 109 FQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHW 155 (182)
Q Consensus 109 ~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrhw 155 (182)
++.|.+-+++.. .-|+.|||.|+.||=.-.|.++-.+..+.+..
T Consensus 65 ~r~F~kYP~~i~---DyFK~sfPeGys~eRt~~FEDGGv~t~~~~is 108 (223)
T 2ejo_A 65 HRPFTKYPEEIP---DYFKQAFPEGLSWERSLEFEDGGSASVSAHIS 108 (223)
T ss_dssp CTTSSBCCTTSC---CHHHHTTTTCEEEEEEEEETTSCEEEEEEEEE
T ss_pred ceecccCCCCCC---CHHHHhCCCCeeEEEEEEECCCcEEEEEEEEE
Confidence 344444444433 34789999999999999999998888877764
No 53
>3ned_A Pamcherry1 protein; RFP, beta barrel, fluorescent protein; HET: NRQ CH6 EYG; 0.95A {Discosoma SP} SCOP: d.22.1.1 PDB: 3kcs_A* 3kct_A* 3lf3_A* 3nez_A* 2h5q_A* 2h5o_A* 2h5p_A* 2h5r_A* 3nf0_A* 4h3l_A* 4h3m_A* 4h3n_A* 2qli_A* 2qlg_A* 2qlh_A* 2vad_A* 2vae_A* 2h8q_A* 1zgo_A* 1ggx_A* ...
Probab=71.46 E-value=6.5 Score=33.46 Aligned_cols=80 Identities=24% Similarity=0.466 Sum_probs=48.9
Q ss_pred eeccceeEEEECC-CccCchhhhhhc----Cc-----cccccccCCCCccccCCCChHHHHHHHHHHHHhCCCCceeEEE
Q 043189 70 TINPEKFKLIVNG-RKDLSGEETLQL----GS-----YNALLKNSLPKEFQYYRADEETFKSSHDAFRSAFPRGFAWEVI 139 (182)
Q Consensus 70 si~~~~f~~s~Ng-g~~~~~~~~~~~----G~-----Yn~~l~~~lp~~~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVl 139 (182)
+|+-.+|.+.=.| |++..+...+++ |. |.. |...+ .++.|.+-+++.. .-|+.|||.|+.||=.
T Consensus 34 ~VNGh~F~i~GeG~G~p~eG~q~~kl~vtkGgPLPFs~dI-Ls~~f--G~r~F~kYP~~i~---DyFK~sfPeGys~eRt 107 (242)
T 3ned_A 34 SVNGHEFEIEGEGEGRPYEGTQTAKLKVTKGGPLPFAWDI-LSPQF--XSKAYVKHPADIP---DYLKLSFPEGFKWERV 107 (242)
T ss_dssp EETTEEEEEEEEEEEETTTTEEEEEEEEEESCSCSSCGGG-TGGGC---CGGGCBCCTTSC---CHHHHTTTTCEEEEEE
T ss_pred EECCEEEEEEEEEeecCCCCEEEEEEEEccCCcCCCCHHH-hhhhc--cceecccCCCCCC---CHHHHhCCCceeEEEE
Confidence 5666666665444 355555544431 21 222 22223 2455555555543 3467999999999999
Q ss_pred EeeeCCCEEEEEEEEE
Q 043189 140 SVFSGPPVVAYKFRHW 155 (182)
Q Consensus 140 eV~s~pp~Vafrwrhw 155 (182)
-.|.++-.+..+.+..
T Consensus 108 ~~FEDGGv~t~~~~is 123 (242)
T 3ned_A 108 MNFEDGGVVTVTQDSS 123 (242)
T ss_dssp EEETTSCEEEEEEEEE
T ss_pred EEEcCCcEEEEEEEEE
Confidence 9999998888877764
No 54
>2ejh_A CYAN-emitting GFP-like protein, kusabira-CYAN (KCY); structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GYS; 1.40A {Fungia concinna} PDB: 2zo6_A* 2eji_A* 2zo7_A*
Probab=67.31 E-value=6.1 Score=33.90 Aligned_cols=44 Identities=20% Similarity=0.336 Sum_probs=32.2
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEE
Q 043189 109 FQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHW 155 (182)
Q Consensus 109 ~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrhw 155 (182)
++.|..-+++.. .-|+.|||.|+.||=.-.|.++-.+..+.+..
T Consensus 97 ~r~F~kYP~~I~---DyFKqsfPeGYsweRt~~FEDGGv~t~~~~is 140 (255)
T 2ejh_A 97 NRCLTKYPDDIP---DYFKQCFPGGYSWERKFEFEDGGLAIAKAEIS 140 (255)
T ss_dssp CTTSSBCCTTSC---CTTGGGTTTCEEEEEEEEETTSCEEEEEEEEE
T ss_pred ceecccCCCCCC---CHHHHhCCCCeeEEEEEEECCCcEEEEEEEEE
Confidence 444544444443 23679999999999999999998888877654
No 55
>3ai5_A Yeast enhanced green fluorescent protein, ubiquit; ubiquitin, fusion protein, fluore protein, transcription; HET: CR2; 1.40A {Aequorea victoria} PDB: 3ako_B*
Probab=64.95 E-value=11 Score=32.81 Aligned_cols=45 Identities=22% Similarity=0.342 Sum_probs=34.6
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEE
Q 043189 109 FQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRH 154 (182)
Q Consensus 109 ~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrh 154 (182)
++.|.+-+++. +...-|+.|||.|+.||=.-.|-++-.+..+++.
T Consensus 69 ~~~f~~yp~~~-~~~d~fk~~~p~gy~~~R~~~fedgg~~~~~~~~ 113 (307)
T 3ai5_A 69 VQCFARYPDHM-KQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEV 113 (307)
T ss_dssp CGGGCBCCGGG-GGGCHHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred chhhccCCCCC-CcCChHHHhCCCCeeEEEEEEECCCcEEEEEEEE
Confidence 55566555551 1135789999999999999999999998887776
No 56
>2zmu_A Fluorescent protein; GFP-like protein, luminescent protein, structural genomics, structural genomics/proteomics initiative, RSGI, NPPSFA; HET: CFY; 1.65A {Fungia concinna} PDB: 2zmw_A* 3mgf_A*
Probab=63.12 E-value=9.8 Score=32.03 Aligned_cols=30 Identities=27% Similarity=0.492 Sum_probs=26.6
Q ss_pred HHHHhCCCCceeEEEEeeeCCCEEEEEEEE
Q 043189 125 AFRSAFPRGFAWEVISVFSGPPVVAYKFRH 154 (182)
Q Consensus 125 ~f~~AFPdGf~wEVleV~s~pp~Vafrwrh 154 (182)
-|+.|||+|+.||=--.|-+|-.+..+.+.
T Consensus 78 yFK~s~peGysweRt~~fEDGGv~t~~~~i 107 (223)
T 2zmu_A 78 YFKQAFPEGLSWERSLEFEDGGSASVSAHI 107 (223)
T ss_dssp HHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred HHHHhCCCCeeEEEEEEECCCcEEEEEEEE
Confidence 478999999999988889999888888876
No 57
>3evp_A Circular-permutated green fluorescent protein; EGFP, chromophore, luminescence, photoprotein, signaling protein; HET: CRO; 1.45A {Aequorea victoria}
Probab=63.04 E-value=9.7 Score=32.49 Aligned_cols=82 Identities=26% Similarity=0.400 Sum_probs=50.4
Q ss_pred eeccceeEEEECC-CccCchhhhhhc----C----ccccccccCCCCccccCCCChHHHHHHHHHHHHhCCCCceeEEEE
Q 043189 70 TINPEKFKLIVNG-RKDLSGEETLQL----G----SYNALLKNSLPKEFQYYRADEETFKSSHDAFRSAFPRGFAWEVIS 140 (182)
Q Consensus 70 si~~~~f~~s~Ng-g~~~~~~~~~~~----G----~Yn~~l~~~lp~~~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVle 140 (182)
+|+-.+|.+.=.| |++..+...+++ | +|..|. ..+ + ++.|..-+++.+ ...-|+.|||+|+.||=.-
T Consensus 122 ~VNGh~F~i~GeG~G~P~eG~q~~kl~vtkGPLPFS~dILs-~~f-~-nr~F~kYP~~i~-i~DyFKqsfPeGysweRt~ 197 (243)
T 3evp_A 122 DVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLV-TTL-X-VQCFSRYPDHMK-QHDFFKSAMPEGYIQERTI 197 (243)
T ss_dssp EETTEEEEEEEEEEEEGGGTEEEEEEEETTSSCSSCGGGGT-TTC---CGGGSBCCGGGG-GGCHHHHTTTTCEEEEEEE
T ss_pred EECCEEEEEEEEEeeCCCCCEEEEEEEEecCCCCCCHHHhh-hhc-c-ccccccCCCCCC-CCCHHHHhCCCCeeEEEEE
Confidence 5666666655433 444554444331 2 122222 222 2 556666666543 1246889999999999999
Q ss_pred eeeCCCEEEEEEEEE
Q 043189 141 VFSGPPVVAYKFRHW 155 (182)
Q Consensus 141 V~s~pp~Vafrwrhw 155 (182)
.|-++-.+..+.+..
T Consensus 198 ~fEDGGv~t~~~~is 212 (243)
T 3evp_A 198 FFKDDGNYKTRAEVK 212 (243)
T ss_dssp EETTSCEEEEEEEEE
T ss_pred EEcCCCEEEEEEEEE
Confidence 999999988877764
No 58
>2a50_B ASFP595, GFP-like non-fluorescent chromoprotein FP595 CHAI; ASCP, fluorescent protein, photochromic prote reversible photoswitch; HET: NRQ; 1.30A {Anemonia sulcata} PDB: 2a53_B* 2a54_B* 2a56_B* 2a52_B* 3cfa_A* 3cfh_A* 3cff_A*
Probab=62.92 E-value=7.5 Score=31.34 Aligned_cols=30 Identities=23% Similarity=0.607 Sum_probs=26.7
Q ss_pred HHHHhCCCCceeEEEEeeeCCCEEEEEEEE
Q 043189 125 AFRSAFPRGFAWEVISVFSGPPVVAYKFRH 154 (182)
Q Consensus 125 ~f~~AFPdGf~wEVleV~s~pp~Vafrwrh 154 (182)
-|+.|||.|+.||=.-.|-+|-.+..+++.
T Consensus 15 yFKqsfpeGysweRt~~fEDGGv~t~~~~i 44 (168)
T 2a50_B 15 YFKQSFPEGFTWERTTTYEDGGFLTAHQDT 44 (168)
T ss_dssp TTGGGTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred HHHHhCCCceeEEEEEEECCCcEEEEEEEE
Confidence 378999999999999999999998888776
No 59
>3ako_A Venus; fluorescent protein, GFP; HET: CR2 PE8; 2.10A {Plant transformation vector psiteii-4corganism_taxid}
Probab=61.12 E-value=12 Score=30.46 Aligned_cols=45 Identities=22% Similarity=0.356 Sum_probs=34.7
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEE
Q 043189 109 FQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRH 154 (182)
Q Consensus 109 ~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrh 154 (182)
++.|..-+++. +...-|+.|||.|+.||=.-.|-++-.+..+.+.
T Consensus 87 nr~F~kYP~~i-~~~DyFKqsfPeGysweRt~~fEDGGv~ta~~~i 131 (173)
T 3ako_A 87 LQCFARYPDHM-KQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEV 131 (173)
T ss_dssp CGGGSBCCGGG-GGGCHHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred ccccccCCCCC-CcCChHHHhCCCCeeEEEEEEECCCcEEEEEEEE
Confidence 55666655552 1135689999999999999999999998887776
No 60
>2gxf_A Hypothetical protein YYBH; alpha-beta protein., structural genomics, PSI, protein structure initiative; HET: MES; 3.10A {Bacillus subtilis} SCOP: d.17.4.22
Probab=58.59 E-value=25 Score=25.10 Aligned_cols=56 Identities=7% Similarity=0.036 Sum_probs=25.9
Q ss_pred CChHHHHHHHHHHHHhCCCCce--eEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEe
Q 043189 114 ADEETFKSSHDAFRSAFPRGFA--WEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYG 176 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~--wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~G 176 (182)
.|++...+.+..+...|+.+.. .+.+++...++..+...+.. +. | .++|+.+.+.|
T Consensus 43 ~G~~aI~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~A~~~~~~~--~~----~-~~~G~~~~~~g 100 (142)
T 2gxf_A 43 RGKEEIKKAFITIANYFNHHIVPTQGKMILLEAGDTVLVLSQTL--LD----S-DKKDSEYAMER 100 (142)
T ss_dssp EHHHHHHHHHHHTTSCCCSSCCCEEEEEEEEEETTEEEEEEEEE--CC----C----------EE
T ss_pred cCHHHHHHHHHHHHHhhCCCceEEEEEEEEEEcCCEEEEEEEEE--EE----E-CCCCCeEeeeE
Confidence 3566666666665555544333 45566777788765443321 22 2 46677777666
No 61
>2c9i_A Green fluorescent protein ASFP499; beta-barrel, bioluminescence, luminescence, luminescent protein; HET: CRQ; 1.82A {Anemonia sulcata}
Probab=56.85 E-value=15 Score=30.89 Aligned_cols=43 Identities=21% Similarity=0.508 Sum_probs=32.7
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEE
Q 043189 109 FQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRH 154 (182)
Q Consensus 109 ~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrh 154 (182)
++.|..-+++.. .-|+.|||.|+.||=.-.|-++-.+..+++.
T Consensus 64 ~r~F~kYP~~i~---DyFKqsfpeGysweRt~~fEDGGv~t~~~~i 106 (226)
T 2c9i_A 64 IKVFAKYPKEIP---DFFKQSLPGGFSWERVSTYEDGGVLSATQET 106 (226)
T ss_dssp CTTSCBCCTTSC---CHHHHHTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred ceecccCCCCCC---CHHHHhCCCCeeEEEEEEECCCcEEEEEEEE
Confidence 444444444443 4478999999999999999999998888776
No 62
>1yzw_A Hcred, GFP-like non-fluorescent chromoprotein; luminescent protein; HET: CRU; 2.10A {Heteractis crispa}
Probab=55.83 E-value=15 Score=30.81 Aligned_cols=43 Identities=19% Similarity=0.481 Sum_probs=32.1
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEE
Q 043189 109 FQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRH 154 (182)
Q Consensus 109 ~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrh 154 (182)
++.|.+-+++.. .-|+.|||.|+.||=.-.|-++-.+..+++.
T Consensus 64 ~r~F~kYP~~i~---DyFK~sfpeGysweRt~~fEDGGv~t~~~~i 106 (225)
T 1yzw_A 64 SRTFVHHTAEIP---DFFKQSFPEGFTWERTTTYEDGGILTAHQDT 106 (225)
T ss_dssp CTTSCEECTTCC---CHHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred hhccccCCcccc---hHHHhhCCCCceEEEEEEEcCCcEEEEEEEE
Confidence 344444444433 4478999999999999999999988888776
No 63
>3u8p_A Cytochrome B562 integral fusion with enhanced GRE fluorescent protein; directed evolution, domain insertion, energy transfer, fluor quenching; HET: CRO HEM; 2.75A {Aequorea victoria}
Probab=55.56 E-value=15 Score=32.85 Aligned_cols=67 Identities=24% Similarity=0.264 Sum_probs=40.9
Q ss_pred eeEEEECCCccCchhhhhh-cCccccccccCCCCccccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEE
Q 043189 75 KFKLIVNGRKDLSGEETLQ-LGSYNALLKNSLPKEFQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFR 153 (182)
Q Consensus 75 ~f~~s~Ngg~~~~~~~~~~-~G~Yn~~l~~~lp~~~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwr 153 (182)
.-.+.+-+||--=+=+||. .=.|-+|..- |.+ .. -+.-|+.+||.|+.||=--.|-++-.+..+..
T Consensus 154 ~~K~v~t~GPLPFs~dIL~~~f~yr~FtkY--P~~----------Ip-~~DyFKqsfPeGyswERt~~FEDGGv~t~~~~ 220 (347)
T 3u8p_A 154 TLKFICTTGKLPVPWPTLVTTLXVQCFSRY--PDH----------MK-QHDFFKSAMPEGYVQERTIFFKDDGNYKTRAE 220 (347)
T ss_dssp EEEEEETTSSCSSCGGGGTTTC-CGGGSBC--CGG----------GG-GGCHHHHTTTTCEEEEEEEEETTSCEEEEEEE
T ss_pred EEEEEEcCCCCCCcHHHhhhhhhhhhhccC--CCC----------CC-ccchHHHhCCCCceEEEEEEEcCCcEEEEEEE
Confidence 4456777775333334443 2246555531 222 10 01358899999999999988888888777766
Q ss_pred E
Q 043189 154 H 154 (182)
Q Consensus 154 h 154 (182)
.
T Consensus 221 i 221 (347)
T 3u8p_A 221 V 221 (347)
T ss_dssp E
T ss_pred E
Confidence 5
No 64
>2hqk_A CYAN fluorescent chromoprotein; 11-stranded beta barrel, luminescent protein; HET: PIA; 1.19A {Clavularia SP} PDB: 2ote_A* 2otb_A* 2vzx_A* 3adf_A* 2gw4_A*
Probab=55.25 E-value=16 Score=30.59 Aligned_cols=43 Identities=21% Similarity=0.475 Sum_probs=32.4
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEE
Q 043189 109 FQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRH 154 (182)
Q Consensus 109 ~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrh 154 (182)
++.|.+-+++.. .-|+.|||.|+.||=.-.|-++-.+..+++.
T Consensus 62 ~r~F~kYP~~i~---DyFK~sfpeGysweRt~~fEDGGv~t~~~~i 104 (219)
T 2hqk_A 62 NRAFTKYPDDIP---NYFKQSFPEGYSWERTMTFEDKGIVKVKSDI 104 (219)
T ss_dssp CTTSCBCCTTSC---CHHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred ccccccCCcccc---hHHHhhCCCCceEEEEEEECCCcEEEEEEEE
Confidence 344444444443 3478999999999999999999988888776
No 65
>3f40_A Uncharacterized NTF2-like protein; YP_677363.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.27A {Cytophaga hutchinsonii atcc 33406}
Probab=55.15 E-value=36 Score=23.98 Aligned_cols=35 Identities=11% Similarity=0.083 Sum_probs=24.5
Q ss_pred ChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEE
Q 043189 115 DEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHW 155 (182)
Q Consensus 115 ~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrhw 155 (182)
|++.+...+.. +++ .+++..+++.|+.|++.|+..
T Consensus 46 G~~~v~~~~~~---~~~---~~~~~~~~~~G~~v~~~~~~~ 80 (114)
T 3f40_A 46 GSERYMNDMEK---MKF---KYVVHKMFEEGNDVCLIYDIN 80 (114)
T ss_dssp SHHHHHHHHHH---HCC---EEEEEEEEEETTEEEEEEEEE
T ss_pred CHHHHHHHHHH---HHh---heEEEEEEecCCcEEEEEEEe
Confidence 55666665543 333 578999999999999877543
No 66
>2hpw_A Green fluorescent protein; GFP, structural genomics, PSI, protein initiative; HET: CSY; 1.55A {Clytia gregaria}
Probab=55.11 E-value=16 Score=30.85 Aligned_cols=43 Identities=19% Similarity=0.260 Sum_probs=32.4
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEE
Q 043189 109 FQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRH 154 (182)
Q Consensus 109 ~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrh 154 (182)
++.|.+-+++.. .-|+.|||.|+.||=.-.|-++-.+..+++.
T Consensus 69 ~r~F~kYP~~i~---DyFK~sfpeGysweRt~~fEDGGv~t~~~~i 111 (233)
T 2hpw_A 69 VFCFAKYPRHIA---DFFKSTQPDGYSQDRIISFDNDGQYDVKAKV 111 (233)
T ss_dssp CGGGSBCCTTSC---CHHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred hhccccCCcccc---hHHHhcCCCceeEEEEEEEcCCcEEEEEEEE
Confidence 344444444433 3478999999999999999999998888776
No 67
>2icr_A RED fluorescent protein ZOANRFP; ZRFP574, chromophore structure, Cys-Phe LINK; HET: XYG; 1.51A {Zoanthus SP} PDB: 2fl1_A* 2ojk_A* 2pxs_A* 2pxw_A* 1xa9_A* 2ogr_A* 1xae_A*
Probab=54.75 E-value=16 Score=30.91 Aligned_cols=44 Identities=18% Similarity=0.308 Sum_probs=33.0
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEE
Q 043189 109 FQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHW 155 (182)
Q Consensus 109 ~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrhw 155 (182)
++.|.+-+++.. .-|+.|||.|+.||=.-.|-++-.+..+++..
T Consensus 75 ~r~F~kYP~~i~---DyFKqsfpeGysweRt~~fEDGGv~t~~~~is 118 (237)
T 2icr_A 75 NRLFTEYPEGIV---DYFKNSCPAGYTWHRSFRFEDGAVCICSADIT 118 (237)
T ss_dssp CTTSCBCCTTSC---CHHHHTTTTCEEEEEEEEETTSCEEEEEEEEE
T ss_pred ccccccCCcccc---cHHHhhCCCCeeEEEEEEECCCcEEEEEEEEE
Confidence 455555544444 34679999999999999999888888887763
No 68
>2iov_A Fluorescent protein dronpa; reversibly switchable fluorescent protein, green-fluorescent like protein, luminescent protein; HET: GYC; 1.80A {Echinophyllia SP} PDB: 2pox_A* 2z6z_A* 2z6x_A*
Probab=54.13 E-value=17 Score=31.09 Aligned_cols=43 Identities=19% Similarity=0.393 Sum_probs=33.0
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEE
Q 043189 109 FQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRH 154 (182)
Q Consensus 109 ~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrh 154 (182)
++.|.+-+++.. .-|+.|||.|+.||=.-.|-++-.+..+++.
T Consensus 96 nr~F~kYP~~i~---DyFKqsfPeGysweRt~~fEDGGv~t~~~~i 138 (255)
T 2iov_A 96 NRVFAKYPENIV---DYFKQSFPEGYSWERSMNYEDGGICNATNDI 138 (255)
T ss_dssp CTTSSBCCTTSC---CHHHHHTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred ccccccCCcccc---hHHHhhCCCCceEEEEEEEcCCcEEEEEEEE
Confidence 455555544443 3478999999999999999999998888776
No 69
>3p28_A Green fluorescent protein; circular permutation, fluorescence, beta barrel; HET: CSY; 1.80A {Aequorea victoria}
Probab=54.00 E-value=17 Score=30.89 Aligned_cols=32 Identities=25% Similarity=0.295 Sum_probs=27.0
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCEEEEEEEEE
Q 043189 124 DAFRSAFPRGFAWEVISVFSGPPVVAYKFRHW 155 (182)
Q Consensus 124 ~~f~~AFPdGf~wEVleV~s~pp~Vafrwrhw 155 (182)
.-|+.|||+|+.||=.-.|-++-.+..+.+..
T Consensus 32 DyFK~sfPeGysweRt~~FEDGGv~t~~~~is 63 (239)
T 3p28_A 32 DFFKSAMPEGYVQERTISFKDDGNYKTRAEVK 63 (239)
T ss_dssp CHHHHTTTTCEEEEEEEEETTSCEEEEEEEEE
T ss_pred ChHHHhCCCceeEEEEEEECCCcEEEEEEEEE
Confidence 34789999999999999999888888777654
No 70
>3cgl_A GFP-like fluorescent chromoprotein DSFP483; beta barrel, chromophore, luminescence, photoprotein, fluore protein; HET: CRQ; 2.09A {Discosoma striata}
Probab=53.62 E-value=17 Score=30.84 Aligned_cols=43 Identities=16% Similarity=0.370 Sum_probs=33.2
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEE
Q 043189 109 FQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRH 154 (182)
Q Consensus 109 ~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrh 154 (182)
++.|.+-+++.. .-|+.|||.|+.||=.-.|-++-.+..+++.
T Consensus 78 ~r~F~kYP~~i~---DyFKqsfpeGysweRt~~fEDGGv~t~~~~i 120 (241)
T 3cgl_A 78 NKAFVHHPDNIH---DYLKLSFPEGYTWERSMHFEDGGLCCITNDI 120 (241)
T ss_dssp CTTSSBCCTTSC---CHHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred ccccccCCcccc---hHHHhhCCCCceEEEEEEECCCcEEEEEEEE
Confidence 455555555443 3478999999999999999999998888776
No 71
>3vht_B Green fluorescent protein, ATPase wrnip1; green fluorescent protein, fusion protein, zinc finger, UBIQ binding domain, fluorescent protein-protein binding complex; HET: CR2; 2.40A {Aequorea victoria}
Probab=52.58 E-value=18 Score=31.25 Aligned_cols=31 Identities=26% Similarity=0.354 Sum_probs=25.8
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCEEEEEEEE
Q 043189 124 DAFRSAFPRGFAWEVISVFSGPPVVAYKFRH 154 (182)
Q Consensus 124 ~~f~~AFPdGf~wEVleV~s~pp~Vafrwrh 154 (182)
.-|+.+||+|+.||=.-.|-++-.+..+.+.
T Consensus 83 DyFKqsfPeGysweRt~~FEDGGv~t~~~~i 113 (271)
T 3vht_B 83 DFFKSAMPEGYVQERTIFFKDDGNYKTRAEV 113 (271)
T ss_dssp CHHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred ChHHHhCCCceeEEEEEEEcCCCEEEEEEEE
Confidence 3588999999999988888888877776665
No 72
>2wur_A Green fluorescent protein; chromophore, beta-barrel, luminescence, photoprotein, bioluminescence; HET: CSY IPA EOH; 0.90A {Aequorea victoria} PDB: 1emk_A* 1eme_A* 1emc_A* 1eml_A* 1s6z_A* 1z1p_A* 1z1q_A* 1q4a_A* 1c4f_A* 1emb_A* 1emg_A* 1ema_A* 1hcj_A* 1q4b_A* 1w7s_A* 1w7t_A* 1w7u_A* 2emd_A* 1emm_A* 2emn_A* ...
Probab=51.62 E-value=20 Score=30.44 Aligned_cols=81 Identities=26% Similarity=0.416 Sum_probs=49.7
Q ss_pred eeccceeEEEECC-CccCchhhhhh----cC----ccccccccCCCCccccCCCChHHHHHHHHHHHHhCCCCceeEEEE
Q 043189 70 TINPEKFKLIVNG-RKDLSGEETLQ----LG----SYNALLKNSLPKEFQYYRADEETFKSSHDAFRSAFPRGFAWEVIS 140 (182)
Q Consensus 70 si~~~~f~~s~Ng-g~~~~~~~~~~----~G----~Yn~~l~~~lp~~~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVle 140 (182)
+|+-.+|.+.=.| |++..+...++ .| +|..|. ..+. ++.|..-+++.+ ...-|+.|||.|+.||=.-
T Consensus 21 ~VNGh~F~i~GeG~G~p~eG~q~~~l~vtkGpLPFs~dILs-~~f~--~r~F~kYP~~i~-~~DyFK~sfpeGysweRt~ 96 (236)
T 2wur_A 21 DVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLV-TTLX--VQCFSRYPDHMK-RHDFFKSAMPEGYVQERTI 96 (236)
T ss_dssp EETTEEEEEEEEEEEEGGGTEEEEEEEETTSSCSSCGGGGT-TTC---CGGGSBCCGGGG-GGCHHHHTTTTCEEEEEEE
T ss_pred EECCEEEEEEEEEeecCCcCEEEEEEEEeCCCCCCcHHHhh-hhhc--ccccccCCCCCC-CCCHHHHhCCCCceEEEEE
Confidence 5555566554433 44544444332 13 233322 2232 566666666621 1356889999999999999
Q ss_pred eeeCCCEEEEEEEE
Q 043189 141 VFSGPPVVAYKFRH 154 (182)
Q Consensus 141 V~s~pp~Vafrwrh 154 (182)
.|-++-.+..+++.
T Consensus 97 ~fEDGGv~t~~~~i 110 (236)
T 2wur_A 97 FFKDDGNYKTRAEV 110 (236)
T ss_dssp EETTSCEEEEEEEE
T ss_pred EECCCcEEEEEEEE
Confidence 99999998887776
No 73
>2rh7_A Green fluorescent protein; HET: CRO; 1.50A {Renilla reniformis} SCOP: d.22.1.1
Probab=50.79 E-value=15 Score=31.22 Aligned_cols=43 Identities=23% Similarity=0.318 Sum_probs=33.0
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEE
Q 043189 109 FQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRH 154 (182)
Q Consensus 109 ~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrh 154 (182)
++.|..-+++.. .-|+.|||.|+.||=.-.|-++-.+..+++.
T Consensus 67 nr~F~kYP~~i~---DyFKqsfpeGysweRt~~fEDGGv~t~~~~i 109 (239)
T 2rh7_A 67 NRAYTGYPEEIS---DYFLQSFPEGFTYERNIRYQDGGTAIVKSDI 109 (239)
T ss_dssp CTTSSBCCTTSC---CTTGGGTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred hhccccCCcccc---hHHHhhCCCCceEEEEEEECCCcEEEEEEEE
Confidence 455555444443 3467999999999999999999999888776
No 74
>2ib5_A Chromo protein, cjblue; beta barrel, alpha helix, chromophore, luminescent protein; HET: CRQ; 1.80A {Cnidopus japonicus} PDB: 2ib6_A*
Probab=50.77 E-value=15 Score=31.07 Aligned_cols=31 Identities=26% Similarity=0.699 Sum_probs=27.1
Q ss_pred HHHHHhCCCCceeEEEEeeeCCCEEEEEEEE
Q 043189 124 DAFRSAFPRGFAWEVISVFSGPPVVAYKFRH 154 (182)
Q Consensus 124 ~~f~~AFPdGf~wEVleV~s~pp~Vafrwrh 154 (182)
.-|+.|||.|+.||=.-.|-++-.+..+++.
T Consensus 79 DyFKqsfpeGysweRt~~fEDGGv~t~~~~i 109 (233)
T 2ib5_A 79 DYFKQSFPEGFTWERTTIYEDGAYLTTQQET 109 (233)
T ss_dssp CTTGGGTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred CHHHHhCCCCeeEEEEEEECCCcEEEEEEEE
Confidence 3478999999999999999999998888776
No 75
>2c9j_A Green fluorescent protein FP512; beta-barrel, bioluminescence, luminescence, luminescent protein; HET: CRQ; 1.35A {Cerianthus membranaceus}
Probab=50.73 E-value=15 Score=30.83 Aligned_cols=30 Identities=23% Similarity=0.481 Sum_probs=26.7
Q ss_pred HHHHhCCCCceeEEEEeeeCCCEEEEEEEE
Q 043189 125 AFRSAFPRGFAWEVISVFSGPPVVAYKFRH 154 (182)
Q Consensus 125 ~f~~AFPdGf~wEVleV~s~pp~Vafrwrh 154 (182)
-|+.|||.|+.||=.-.|-+|-.+..+++.
T Consensus 76 yFK~sfpeGysweRt~~fEDGGv~t~~~~i 105 (223)
T 2c9j_A 76 YFKGSFPEAFQWNRRIEFEDGGVINMSSDI 105 (223)
T ss_dssp TTGGGTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred HHHHhCCCCeeEEEEEEECCCcEEEEEEEE
Confidence 478999999999999999999998888776
No 76
>3ir8_A Large stokes shift fluorescent protein; beta barrel; HET: CRQ; 1.63A {Montipora SP} SCOP: d.22.1.1 PDB: 2wht_A* 2whs_A* 2whu_A* 3vk1_A* 2p4m_A* 2arl_A* 3vic_A* 1mov_A* 1mou_A*
Probab=50.41 E-value=21 Score=29.87 Aligned_cols=31 Identities=26% Similarity=0.523 Sum_probs=26.8
Q ss_pred HHHHhCCCCceeEEEEeeeCCCEEEEEEEEE
Q 043189 125 AFRSAFPRGFAWEVISVFSGPPVVAYKFRHW 155 (182)
Q Consensus 125 ~f~~AFPdGf~wEVleV~s~pp~Vafrwrhw 155 (182)
-|+.|||.|+.||=.-.|.++-.+..+.+..
T Consensus 78 yFk~sfpeGys~eRt~~fEDGGv~t~~~~is 108 (221)
T 3ir8_A 78 YFKQSFPEGYTWERSMNFEDGAVCTVSNDSS 108 (221)
T ss_dssp HHHHTTTTCEEEEEEEEETTSCEEEEEEEEE
T ss_pred hHHhhCCCceeEEEEEEEcCCcEEEEEEEEE
Confidence 4789999999999999999998888877764
No 77
>1xmz_A ASCP595, GFP-like chromoprotein FP595; fluorescent protein, chromophore structure, lumines protein; HET: CRK; 1.38A {Anemonia sulcata} PDB: 1xqm_A*
Probab=49.19 E-value=16 Score=31.00 Aligned_cols=30 Identities=23% Similarity=0.607 Sum_probs=26.7
Q ss_pred HHHHhCCCCceeEEEEeeeCCCEEEEEEEE
Q 043189 125 AFRSAFPRGFAWEVISVFSGPPVVAYKFRH 154 (182)
Q Consensus 125 ~f~~AFPdGf~wEVleV~s~pp~Vafrwrh 154 (182)
-|+.|||.|+.||=.-.|-++-.+..+++.
T Consensus 88 yFKqsfpeGysweRt~~fEDGGv~t~~~~i 117 (241)
T 1xmz_A 88 YFKQSFPEGFTWERTTTYEDGGFLTAHQDT 117 (241)
T ss_dssp TTGGGTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred HHHHhCCCCeeEEEEEEECCCcEEEEEEEE
Confidence 478999999999999999999988888776
No 78
>3e5t_A FP611;, RED fluorescent protein EQFP611; chromophore, luminescence, photoprotein; HET: NRQ; 1.10A {Entacmaea quadricolor} SCOP: d.22.1.1 PDB: 3e5v_A* 1uis_A* 3e5w_A* 3u0l_A* 3u0m_A* 3u0n_A* 3pjb_A* 3pib_A* 4edo_A* 3m22_A* 3pj7_A* 4eds_A* 3t6h_A* 3bxa_A* 3bx9_A* 3bxb_A* 3bxc_A* 3svn_A* 3u8a_A* 3u8c_A* ...
Probab=48.59 E-value=17 Score=30.93 Aligned_cols=44 Identities=20% Similarity=0.442 Sum_probs=32.3
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEE
Q 043189 109 FQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHW 155 (182)
Q Consensus 109 ~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrhw 155 (182)
++.|..-+++.. .-|+.|||.|+.||=.-.|.++-.+..+.+..
T Consensus 77 ~r~F~kYP~~i~---DyFK~sfPeGys~eRt~~FEDGGv~t~~~~is 120 (242)
T 3e5t_A 77 SKTFIKHTKGIP---DFFKQSFPEGFTWERVTRYEDGGVFTVMQDTS 120 (242)
T ss_dssp CTTCCEECTTCC---CTTGGGTTTCEEEEEEEEETTSCEEEEEEEEE
T ss_pred ccccccCCCCCC---cHHHHhCCCCeeEEEEEEECCCcEEEEEEEEE
Confidence 344444444333 23679999999999999999998888887764
No 79
>2a46_A GFP-like fluorescent chromoprotein AMFP486; beta barrel, luminescent protein; HET: CR7; 1.65A {Anemonia majano} PDB: 2a48_A* 2a47_A*
Probab=48.58 E-value=17 Score=30.86 Aligned_cols=43 Identities=21% Similarity=0.397 Sum_probs=32.2
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEE
Q 043189 109 FQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRH 154 (182)
Q Consensus 109 ~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrh 154 (182)
++.|.+-+++.. .-|+.|||.|+.||=.-.|-++-.+..+++.
T Consensus 80 ~r~F~kYP~~i~---DyFKqsfpeGysweRt~~fEDGGv~t~~~~i 122 (238)
T 2a46_A 80 NRCFTAYPTSMP---DYFKQAFPDGMSYERTFTYEDGGVATASWEI 122 (238)
T ss_dssp CTTSSBCCTTSC---CTTGGGTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred hhccccCCcccc---hHHHhhCCCCceEEEEEEECCCcEEEEEEEE
Confidence 344444444433 3467999999999999999999998888776
No 80
>2gw3_A Kaede; beta barrel, luminescent protein; HET: CR8; 1.40A {Trachyphyllia geoffroyi} PDB: 1zux_A* 3s05_A* 3p8u_A* 3tmr_A* 3tmt_A* 2vvh_A* 2vvi_A* 2vvj_A* 2btj_A* 2gw4_B* 2ddc_A* 2ddd_A* 2ie2_A* 2z1o_A* 2z6y_A* 2gx2_A* 2gx0_A* 3ls3_A* 3lsa_A* 1xss_A* ...
Probab=46.63 E-value=16 Score=30.76 Aligned_cols=43 Identities=23% Similarity=0.458 Sum_probs=32.4
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEE
Q 043189 109 FQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRH 154 (182)
Q Consensus 109 ~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrh 154 (182)
++.|..-+++.. .-|+.|||.|+.||=.-.|-++-.+..+++.
T Consensus 65 ~r~F~kYP~~i~---DyFKqsfpeGysweRt~~fEDGGv~t~~~~i 107 (225)
T 2gw3_A 65 NRVFAKYPDHIP---DYFKQSFPKGFSWERSLMFEDGGVCIATNDI 107 (225)
T ss_dssp CTTSSBCCTTSC---CTTTTSTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred hhccccCCcccc---hHHHhhCCCCceEEEEEEECCCcEEEEEEEE
Confidence 344544444443 3467999999999999999999998888776
No 81
>2g6y_A Green fluorescent protein 2; natural chromophore, rapid matura beta-CAN, luminescent protein; HET: CR2; 1.60A {Pontellina plumata} PDB: 2g6x_A* 2g3o_A*
Probab=46.34 E-value=27 Score=29.13 Aligned_cols=32 Identities=19% Similarity=0.276 Sum_probs=28.0
Q ss_pred HHHHHhC-CCCceeEEEEeeeCCCEEEEEEEEE
Q 043189 124 DAFRSAF-PRGFAWEVISVFSGPPVVAYKFRHW 155 (182)
Q Consensus 124 ~~f~~AF-PdGf~wEVleV~s~pp~Vafrwrhw 155 (182)
.-|+.|| |.|+.||=.-.|-++-.+..+++..
T Consensus 70 DyFK~sf~peGysweRt~~fEDGGv~t~~~~it 102 (217)
T 2g6y_A 70 NPFLHAINNGGYTNTRIEKYEDGGVLHVSFSYR 102 (217)
T ss_dssp CHHHHGGGTTCEEEEEEEEETTSCEEEEEEEEE
T ss_pred hHHHhhcCCCCceEEEEEEEcCCcEEEEEEEEE
Confidence 3478999 9999999999999999999888773
No 82
>3ai4_A Yeast enhanced green fluorescent protein, DNA POL IOTA; UBM, ubiquitin-binding motif, GFP, fusion, fluorescent prote replication; HET: CR2; 1.60A {Aequorea victoria} PDB: 2kwu_A* 2ktf_B* 2l0g_A*
Probab=46.21 E-value=26 Score=30.46 Aligned_cols=45 Identities=22% Similarity=0.342 Sum_probs=33.9
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEE
Q 043189 109 FQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRH 154 (182)
Q Consensus 109 ~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrh 154 (182)
++.|..-+++. +...-|+.|||.|+.||=.-.|-++-.+..+.+.
T Consensus 69 nr~F~kYP~~i-~~~DyFKqsfpeGysweRt~~fEDGGv~t~~~~i 113 (283)
T 3ai4_A 69 VQCFARYPDHM-KQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEV 113 (283)
T ss_dssp CGGGCBCCGGG-GGGCHHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred hhhhccCCCCC-CcCChHHHhCCCCceEEEEEEEcCCcEEEEEEEE
Confidence 45555555552 1135689999999999999999999988887766
No 83
>2dd7_A Green fluorescent protein; luminescent protein; HET: CR2 CXS; 1.90A {Chiridius poppei} PDB: 2dd9_A*
Probab=45.41 E-value=25 Score=29.32 Aligned_cols=32 Identities=13% Similarity=0.240 Sum_probs=28.1
Q ss_pred HHHHHhC-CCCceeEEEEeeeCCCEEEEEEEEE
Q 043189 124 DAFRSAF-PRGFAWEVISVFSGPPVVAYKFRHW 155 (182)
Q Consensus 124 ~~f~~AF-PdGf~wEVleV~s~pp~Vafrwrhw 155 (182)
.-|+.|| |.|+.||=.-.|-+|-.+..+++..
T Consensus 67 DyFK~sf~peGysweRt~~fEDGGv~t~~~~it 99 (216)
T 2dd7_A 67 NIYLHAATNGGYTNTRKEIYEDGGILEVNFRYT 99 (216)
T ss_dssp CHHHHHHTTTCEEEEEEEEETTSCEEEEEEEEE
T ss_pred hHHHhccCCCceeEEEEEEECCCcEEEEEEEEE
Confidence 3478999 9999999999999999999888773
No 84
>3rwa_A Fluorescent protein FP480; GFP-like fluoresent proteins, mkate, circular permutated, FL protein; HET: NRQ; 1.67A {Entacmaea quadricolor} PDB: 3rwt_A*
Probab=44.49 E-value=21 Score=30.16 Aligned_cols=81 Identities=25% Similarity=0.526 Sum_probs=51.8
Q ss_pred eeeccceeEEEECC-CccCchhhhhhc----C-----ccccccccCCCCccccCCCChHHHHHHHHHHHHhCCCCceeEE
Q 043189 69 KTINPEKFKLIVNG-RKDLSGEETLQL----G-----SYNALLKNSLPKEFQYYRADEETFKSSHDAFRSAFPRGFAWEV 138 (182)
Q Consensus 69 ~si~~~~f~~s~Ng-g~~~~~~~~~~~----G-----~Yn~~l~~~lp~~~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEV 138 (182)
-+|+-.+|.+.=.| |++..+...+++ | +|..|. ..+ .++.|.+-+++.. .-|+.|||.|+.||=
T Consensus 87 G~VNGh~F~i~GeG~G~p~eG~q~~~l~vtkG~pLPFs~dILs-~~f--G~r~F~kYP~~i~---dyFk~sfpeGys~eR 160 (233)
T 3rwa_A 87 GTVNNHHFKCTSEGEGKPYEGTQTMRIKVVEGGPLPFAFDILA-TSF--XSKTFINHTQGIP---DFFKQSFPEGFTWER 160 (233)
T ss_dssp EEETTEEEEEEEEEEEETTTTEEEEEEEEEESCSCSSCGGGGG-GGC---CTTCCBCTTTCC---CTTGGGTTTCEEEEE
T ss_pred EEECCEEEEEEEEEeecCCCCEEEEEEEEccCCcCCCCHHHhh-hhh--cccccccCCCCCC---CHHHHhCCCCeeEEE
Confidence 36666677665544 466666655542 3 233332 223 2455665555544 336799999999999
Q ss_pred EEeeeCCCEEEEEEEEE
Q 043189 139 ISVFSGPPVVAYKFRHW 155 (182)
Q Consensus 139 leV~s~pp~Vafrwrhw 155 (182)
.-.|.++-.+....+..
T Consensus 161 t~~fEDGGv~t~~~~i~ 177 (233)
T 3rwa_A 161 VTTYEDGGVLTATQDTS 177 (233)
T ss_dssp EEEETTSCEEEEEEEEE
T ss_pred EEEEcCCcEEEEEEEEE
Confidence 99999998888877764
No 85
>2zo6_A CYAN-emitting GFP-like protein, kusabira-CYAN (KC; luminescent protein, structural genomics, structural genomics/proteomics initiative, RSGI; HET: GYS; 1.40A {Fungia concinna} PDB: 2zo7_A*
Probab=42.73 E-value=23 Score=30.27 Aligned_cols=30 Identities=27% Similarity=0.509 Sum_probs=25.9
Q ss_pred HHHHhCCCCceeEEEEeeeCCCEEEEEEEE
Q 043189 125 AFRSAFPRGFAWEVISVFSGPPVVAYKFRH 154 (182)
Q Consensus 125 ~f~~AFPdGf~wEVleV~s~pp~Vafrwrh 154 (182)
-|+.+||.|+.||=.-.|-++-.+..+.+.
T Consensus 107 yfK~sfPeGysweRt~~fEDGGv~t~~~~i 136 (252)
T 2zo6_A 107 YFKQCFPGGYSWERKFEFEDGGLAIAKAEI 136 (252)
T ss_dssp TTGGGTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred HHHHhCCCceeEEEEEEECCCCEEEEEEEE
Confidence 467999999999999999988888877765
No 86
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=42.68 E-value=30 Score=30.68 Aligned_cols=45 Identities=24% Similarity=0.376 Sum_probs=33.3
Q ss_pred cccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEE
Q 043189 109 FQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRH 154 (182)
Q Consensus 109 ~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrh 154 (182)
++.|.+-+++.+ ...-|+.|||.|+.||=.-.|-++-.+..+++.
T Consensus 66 ~~~f~~yP~~i~-~~d~fk~~~p~Gy~~eR~~~fEDgg~~~~~~~~ 110 (362)
T 2jad_A 66 LQCFARYPDHMK-RHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEV 110 (362)
T ss_dssp CGGGSBCCTTCG-GGCHHHHTTTTCEEEEEEEEETTSCEEEEEEEE
T ss_pred ccccccCCCCCC-CCChHHHhCCCceeEEEEEEEcCCcEEEEEEEE
Confidence 455555544421 124588999999999999999999998887766
No 87
>3osr_A Maltose-binding periplasmic protein, green fluore protein; engineered protein, sensor protein, fluorescent protein, MBP maltose sensor; HET: C12 MAL; 2.00A {Escherichia coli}
Probab=42.14 E-value=29 Score=32.41 Aligned_cols=120 Identities=22% Similarity=0.274 Sum_probs=68.4
Q ss_pred hhhccceecCCC---------CCHHHHHHHhHheeeeeccccCCcccceeeccceeEEEECC-CccCchhhhhhc----C
Q 043189 30 LFEEGRTKEWPK---------GSIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNG-RKDLSGEETLQL----G 95 (182)
Q Consensus 30 ~~~~~rt~~~~~---------gSLe~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ng-g~~~~~~~~~~~----G 95 (182)
++.+=++..+++ +-.+-+|...=.-|+=++..|...+- +|+-.+|.+.=.| |+++.+...+++ |
T Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~m~~~~~~~g--~vn~~~f~~~g~g~g~~~~g~~~~~~~~~~~ 499 (653)
T 3osr_A 422 VLLEFVTAAGITLGMDELYKGGTGGSMVSKGEELFTGVVPILVELDG--DVNGHKFSVSGEGEGDATYGKLTLKFICTTG 499 (653)
T ss_dssp EEEEEEEEECCC-----------------CGGGGGSSCEEEEEEEEE--EETTEEEEEEEEEEEEGGGTEEEEEEEETTS
T ss_pred eeeeeeeccCcchhhHHHhhcCCccceeecchhhccccceEEEEEEE--EECCEEEEEEEEEeecCCCCeEEEEEEEecC
Confidence 344555566652 33444555555555555555655553 7777777765443 555655554432 2
Q ss_pred ----ccccccccCCCCccccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEE
Q 043189 96 ----SYNALLKNSLPKEFQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHW 155 (182)
Q Consensus 96 ----~Yn~~l~~~lp~~~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrhw 155 (182)
+|..|. ..+ + ++.|..-+++.. -..-|+.+||+|+.||=.-.|-+|-.+..+.+.+
T Consensus 500 ~l~~~~~~~~-~~~-~-~~~~~~~p~~~~-~~~~~~~~~~~g~~~~r~~~~ed~~~~~~~~~~~ 559 (653)
T 3osr_A 500 KLPVPWPTLV-TTL-X-VQCFSRYPDHMK-QHDFFKSAMPEGYIQERTIFFKDDGNYKTRAEVK 559 (653)
T ss_dssp SCSSCGGGGT-TTC---CGGGSBCCGGGG-GGCHHHHTTTTCEEEEEEEEETTSCEEEEEEEEE
T ss_pred CCCCCHHHhh-hhh-c-ccccccCCCCCC-CCCHHHHhCCCCceEEEEEEEcCCCEEEEEEEEE
Confidence 122222 222 2 566666555543 1246889999999999999999999888877765
No 88
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=34.45 E-value=47 Score=30.36 Aligned_cols=80 Identities=21% Similarity=0.445 Sum_probs=49.0
Q ss_pred eeeccceeEEEECCC-ccCchhhhhh----cC-----ccccccccCCCCccccCCCChHHHHHHHHHHHHhCCCCceeEE
Q 043189 69 KTINPEKFKLIVNGR-KDLSGEETLQ----LG-----SYNALLKNSLPKEFQYYRADEETFKSSHDAFRSAFPRGFAWEV 138 (182)
Q Consensus 69 ~si~~~~f~~s~Ngg-~~~~~~~~~~----~G-----~Yn~~l~~~lp~~~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEV 138 (182)
-+|+-.+|.+.=.|. +++.+...++ .| +|..|- ..+ + ++.|..-+++... -|+.+||.|+.|+=
T Consensus 168 G~vngh~f~~~g~G~g~p~~G~~~~~~~v~~g~plpfs~~il~-~~~-~-~~~f~~yP~~i~~---~fk~~~p~g~t~~R 241 (440)
T 3u0k_A 168 GSVNGHQFKCTGEGEGNPYMGTQTMRIKVIEGGPLPFAFDILA-TSX-X-SRTFIKYPKGIPD---FFKQSFPEGFTWER 241 (440)
T ss_dssp EEETTEEEEEEEEEEEETTTTEEEEEEEEEESCSCSSCGGGGT-TCC---CTTSCBCCTTSCC---HHHHTTTTCEEEEE
T ss_pred EEECCeEEEEEeeecCCCCCCeEEEEEEEecCCCCCCcHHHhc-ccc-c-hhhhccCCCCchh---HHHHhCcCCceeeE
Confidence 367777777765553 6666665554 13 232221 111 1 2333333333333 28899999999999
Q ss_pred EEeeeCCCEEEEEEEE
Q 043189 139 ISVFSGPPVVAYKFRH 154 (182)
Q Consensus 139 leV~s~pp~Vafrwrh 154 (182)
.-.|.+|-.+...-++
T Consensus 242 ~~~fedgg~~t~~~~~ 257 (440)
T 3u0k_A 242 VTRYEDGGVITVMQDT 257 (440)
T ss_dssp EEEETTSCEEEEEEEE
T ss_pred EEEecCCCEEEEeeee
Confidence 9999998888777665
No 89
>1p3q_Q VPS9P, vacuolar protein sorting-associated protein VPS9; trafficking, post translational modification, mono- ubiquitination; 1.70A {Saccharomyces cerevisiae} SCOP: a.5.2.4 PDB: 1mn3_A
Probab=32.67 E-value=15 Score=24.46 Aligned_cols=24 Identities=21% Similarity=0.387 Sum_probs=18.9
Q ss_pred hHHHHHHHHHHHHhCCCCceeEEEE
Q 043189 116 EETFKSSHDAFRSAFPRGFAWEVIS 140 (182)
Q Consensus 116 ~e~f~~s~~~f~~AFPdGf~wEVle 140 (182)
+..+++..+.++.+||+ +--||++
T Consensus 9 ~~e~~~~~~~L~~MFP~-lD~evI~ 32 (54)
T 1p3q_Q 9 ENERKDTLNTLQNMFPD-MDPSLIE 32 (54)
T ss_dssp HHHHHHHHHHHHHHSTT-SCHHHHH
T ss_pred HHHHHHHHHHHHHHccc-CCHHHHH
Confidence 35678889999999999 7766543
No 90
>2ed6_A 25KDA structural protein VP25; beta barrel, N-terminal helix protruding region, viral protein; 2.00A {Shrimp white spot syndrome virus} SCOP: b.170.1.1
Probab=30.83 E-value=28 Score=27.21 Aligned_cols=24 Identities=25% Similarity=0.498 Sum_probs=21.9
Q ss_pred eeeccccccCCCCCEEEEEeEEEE
Q 043189 157 YFEGPFQGHAPTGEMVEFYGIGIM 180 (182)
Q Consensus 157 t~~G~F~G~~pTGk~Vei~Gi~i~ 180 (182)
+|+|.|+--+.|.++|.|+||...
T Consensus 86 tfegtfkvwnntsrkinitgmqmv 109 (170)
T 2ed6_A 86 TFEGTFKVWNNTSRKINITGMQMV 109 (170)
T ss_dssp EEECCEEEEECSSSCEEEEEEEEE
T ss_pred EEEEEEEeecCcceeEeeeeeEee
Confidence 589999999999999999999865
No 91
>3h51_A Putative calcium/calmodulin dependent protein KIN association domain; NP_636218.1; HET: MSE PG4; 1.70A {Xanthomonas campestris PV}
Probab=28.12 E-value=1.7e+02 Score=20.99 Aligned_cols=56 Identities=9% Similarity=0.004 Sum_probs=34.7
Q ss_pred CChHHHHHHHHHHHHhCCCCceeE--EEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeE
Q 043189 114 ADEETFKSSHDAFRSAFPRGFAWE--VISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGI 177 (182)
Q Consensus 114 ~~~e~f~~s~~~f~~AFPdGf~wE--VleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi 177 (182)
.+++.+.+.+..+...+|. ...+ .+++ .+++.....++...+.. .++|+.+.+.|.
T Consensus 61 ~G~~~i~~~~~~~~~~~~~-~~i~~~~i~~-~~gd~A~~~~~~~~~~~------~~~G~~~~~~~r 118 (156)
T 3h51_A 61 ASREQIENYFEMFLTKKPK-GVINYRTVRL-LDDDSAVDAGVYTFTLT------DKNGKKSDVQAR 118 (156)
T ss_dssp CSHHHHHHHHHHHGGGCCE-EEEEEEEEEE-CSSSEEEEEEEEEEEEE------CTTSCEEEEEEE
T ss_pred cCHHHHHHHHHHHHhhCCC-CcccceEEEE-ecCCeEEEEEEEEEEEE------cCCCCeEEEEeE
Confidence 4677888888877777876 3444 3444 36787777766554433 246766655443
No 92
>3f7s_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Pseudomonas putida KT2440}
Probab=23.59 E-value=1.9e+02 Score=20.07 Aligned_cols=40 Identities=5% Similarity=0.150 Sum_probs=29.3
Q ss_pred ChHHHHHHHHHHHHhCCCCceeEEEE--eeeCCCEEEEEEEE
Q 043189 115 DEETFKSSHDAFRSAFPRGFAWEVIS--VFSGPPVVAYKFRH 154 (182)
Q Consensus 115 ~~e~f~~s~~~f~~AFPdGf~wEVle--V~s~pp~Vafrwrh 154 (182)
|++.+.+....+...+|.++.+++.+ |..+++..+..++.
T Consensus 50 G~~air~~~~~~~~~~~~~~~~~~~~~~v~~~gd~A~~~~~~ 91 (142)
T 3f7s_A 50 GKSAYTAHWEMCMGMCTGPMVFELAQLTVHAAGDLALAHWLN 91 (142)
T ss_dssp SHHHHHHHHHHHHHTCCSCEEEEEEEEEEEEETTEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhCCCceEEEEeeeEEEEcCCEEEEEEEE
Confidence 67778888877777888667777765 45678887776653
No 93
>3eja_A Protein GH61E; beta sandwich, fibronectin type III fold, metal site, magnes unknown function; HET: NAG; 1.90A {Thielavia terrestris} PDB: 3eii_A*
Probab=22.35 E-value=30 Score=28.44 Aligned_cols=21 Identities=24% Similarity=0.268 Sum_probs=18.5
Q ss_pred eeCCCEEEEEEEEEeeeeccc
Q 043189 142 FSGPPVVAYKFRHWGYFEGPF 162 (182)
Q Consensus 142 ~s~pp~VafrwrhwGt~~G~F 162 (182)
++.|++|.|+|+.|-.|.||-
T Consensus 52 V~AG~~v~~~~~~~~~H~GPv 72 (208)
T 3eja_A 52 TTAGSTVTYWANPDVYHPGPV 72 (208)
T ss_dssp EETTCEEEEEEESCCCSSSCE
T ss_pred ECCCCEEEEEEecCCCCCCce
Confidence 467799999999999999983
No 94
>4eis_A Polysaccharide monooxygenase-3; GH61, PMO, cellulase, biofuels, CBM33, copper monooxygenase, peroxide, superoxide, CBP21, beta-sandwich fold; HET: HIC DAH NAG; 1.37A {Neurospora crassa} PDB: 4eis_B*
Probab=21.50 E-value=24 Score=29.32 Aligned_cols=24 Identities=21% Similarity=0.383 Sum_probs=18.2
Q ss_pred EEEeeeCCCEEEEEEEEEee-eeccc
Q 043189 138 VISVFSGPPVVAYKFRHWGY-FEGPF 162 (182)
Q Consensus 138 VleV~s~pp~VafrwrhwGt-~~G~F 162 (182)
+.. ++.|++|.|+|++|.. |.||.
T Consensus 62 ~~~-V~AG~~v~~~w~~w~~sH~GPv 86 (225)
T 4eis_A 62 HAS-AAAGSTVTLRWTIWPDSHVGPV 86 (225)
T ss_dssp CEE-EETTCEEEEEESCCCTTCCCCE
T ss_pred EEE-ECCCCEEEEEEEcCCCCCCCcc
Confidence 344 4667999999999865 88873
Done!